Multiple sequence alignment - TraesCS3D01G137600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G137600 chr3D 100.000 3886 0 0 1 3886 96128806 96124921 0.000000e+00 7177.0
1 TraesCS3D01G137600 chr3D 97.101 69 1 1 712 779 3309539 3309471 8.820000e-22 115.0
2 TraesCS3D01G137600 chr3D 94.737 38 2 0 23 60 71972930 71972967 4.190000e-05 60.2
3 TraesCS3D01G137600 chr3B 90.820 2647 158 41 622 3233 147187637 147185041 0.000000e+00 3463.0
4 TraesCS3D01G137600 chr3B 85.460 729 90 9 1338 2064 799548326 799547612 0.000000e+00 745.0
5 TraesCS3D01G137600 chr3B 84.629 553 42 21 3346 3886 147184773 147184252 9.630000e-141 510.0
6 TraesCS3D01G137600 chr3A 85.361 1011 93 27 2178 3158 114240747 114239762 0.000000e+00 996.0
7 TraesCS3D01G137600 chr3A 86.635 853 71 24 635 1470 114242361 114241535 0.000000e+00 904.0
8 TraesCS3D01G137600 chr3A 91.824 636 44 5 1488 2120 114241401 114240771 0.000000e+00 880.0
9 TraesCS3D01G137600 chr3A 91.818 110 9 0 105 214 114243025 114242916 1.870000e-33 154.0
10 TraesCS3D01G137600 chr3A 92.391 92 7 0 3652 3743 114239083 114238992 8.760000e-27 132.0
11 TraesCS3D01G137600 chr3A 100.000 65 0 0 712 776 38279371 38279307 1.900000e-23 121.0
12 TraesCS3D01G137600 chr3A 87.736 106 6 5 3777 3875 114238992 114238887 2.450000e-22 117.0
13 TraesCS3D01G137600 chr7A 85.695 727 85 12 1338 2061 113109729 113110439 0.000000e+00 749.0
14 TraesCS3D01G137600 chr7A 83.815 173 21 7 208 376 105573901 105574070 1.450000e-34 158.0
15 TraesCS3D01G137600 chr7A 82.840 169 26 2 208 376 610448976 610449141 8.700000e-32 148.0
16 TraesCS3D01G137600 chr5A 85.399 726 90 9 1341 2064 400399916 400399205 0.000000e+00 739.0
17 TraesCS3D01G137600 chr5A 82.036 167 28 1 213 379 555057163 555057327 1.460000e-29 141.0
18 TraesCS3D01G137600 chr5A 81.657 169 27 3 208 376 136396942 136396778 1.880000e-28 137.0
19 TraesCS3D01G137600 chr5A 95.714 70 2 1 712 781 644821048 644821116 1.140000e-20 111.0
20 TraesCS3D01G137600 chr2A 84.986 726 93 9 1338 2061 59043587 59044298 0.000000e+00 723.0
21 TraesCS3D01G137600 chr2A 89.101 523 38 14 769 1288 332021441 332021947 1.970000e-177 632.0
22 TraesCS3D01G137600 chr2B 85.125 679 87 7 1384 2061 52231560 52232225 0.000000e+00 682.0
23 TraesCS3D01G137600 chr2B 86.564 521 48 11 771 1288 367685760 367685259 4.390000e-154 555.0
24 TraesCS3D01G137600 chr2D 87.356 522 36 13 770 1288 274854704 274855198 4.360000e-159 571.0
25 TraesCS3D01G137600 chr2D 88.409 440 45 4 1623 2061 253619762 253620196 3.440000e-145 525.0
26 TraesCS3D01G137600 chr7B 89.367 442 38 5 1623 2061 312025918 312026353 7.340000e-152 547.0
27 TraesCS3D01G137600 chr7B 85.366 492 63 5 1338 1828 148946731 148947214 5.800000e-138 501.0
28 TraesCS3D01G137600 chr7B 97.222 72 2 0 712 783 577235032 577235103 5.270000e-24 122.0
29 TraesCS3D01G137600 chr7B 94.595 74 0 4 712 781 678740976 678740903 1.140000e-20 111.0
30 TraesCS3D01G137600 chr1D 88.500 200 22 1 2686 2885 141943024 141943222 1.400000e-59 241.0
31 TraesCS3D01G137600 chr1D 91.525 118 10 0 1098 1215 141941507 141941624 3.110000e-36 163.0
32 TraesCS3D01G137600 chr1D 94.595 74 1 2 712 782 342187412 342187339 1.140000e-20 111.0
33 TraesCS3D01G137600 chr1B 88.776 196 22 0 2690 2885 196142731 196142926 1.400000e-59 241.0
34 TraesCS3D01G137600 chr1B 82.036 167 28 1 210 376 666933703 666933539 1.460000e-29 141.0
35 TraesCS3D01G137600 chr1A 87.940 199 23 1 2691 2889 148609211 148609014 2.330000e-57 233.0
36 TraesCS3D01G137600 chr7D 84.524 168 23 2 209 376 60495956 60496120 3.110000e-36 163.0
37 TraesCS3D01G137600 chr7D 83.537 164 25 1 213 376 593733284 593733445 6.720000e-33 152.0
38 TraesCS3D01G137600 chr7D 95.890 73 2 1 712 783 535547319 535547391 2.450000e-22 117.0
39 TraesCS3D01G137600 chr5B 84.146 164 24 1 212 375 407219392 407219553 1.450000e-34 158.0
40 TraesCS3D01G137600 chr5D 81.657 169 29 1 208 376 123460077 123459911 5.240000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G137600 chr3D 96124921 96128806 3885 True 7177.0 7177 100.000000 1 3886 1 chr3D.!!$R2 3885
1 TraesCS3D01G137600 chr3B 147184252 147187637 3385 True 1986.5 3463 87.724500 622 3886 2 chr3B.!!$R2 3264
2 TraesCS3D01G137600 chr3B 799547612 799548326 714 True 745.0 745 85.460000 1338 2064 1 chr3B.!!$R1 726
3 TraesCS3D01G137600 chr3A 114238887 114243025 4138 True 530.5 996 89.294167 105 3875 6 chr3A.!!$R2 3770
4 TraesCS3D01G137600 chr7A 113109729 113110439 710 False 749.0 749 85.695000 1338 2061 1 chr7A.!!$F2 723
5 TraesCS3D01G137600 chr5A 400399205 400399916 711 True 739.0 739 85.399000 1341 2064 1 chr5A.!!$R2 723
6 TraesCS3D01G137600 chr2A 59043587 59044298 711 False 723.0 723 84.986000 1338 2061 1 chr2A.!!$F1 723
7 TraesCS3D01G137600 chr2A 332021441 332021947 506 False 632.0 632 89.101000 769 1288 1 chr2A.!!$F2 519
8 TraesCS3D01G137600 chr2B 52231560 52232225 665 False 682.0 682 85.125000 1384 2061 1 chr2B.!!$F1 677
9 TraesCS3D01G137600 chr2B 367685259 367685760 501 True 555.0 555 86.564000 771 1288 1 chr2B.!!$R1 517
10 TraesCS3D01G137600 chr1D 141941507 141943222 1715 False 202.0 241 90.012500 1098 2885 2 chr1D.!!$F1 1787

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
126 127 0.250640 GCAGCTACTATGGCCTGCAT 60.251 55.0 3.32 0.0 35.54 3.96 F
1450 1790 0.038166 ACATGCATCGGGTTCTGGTT 59.962 50.0 0.00 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1546 2003 0.806868 TAACTACTCGGTGCCACTCG 59.193 55.0 0.00 0.0 0.00 4.18 R
3294 4546 0.601046 ATATGCGGCATCGTGTGGAG 60.601 55.0 20.34 0.0 38.89 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.559785 GCACCTGGACTGTGGATTG 58.440 57.895 0.00 0.00 34.27 2.67
19 20 0.250901 GCACCTGGACTGTGGATTGT 60.251 55.000 0.00 0.00 34.27 2.71
20 21 1.813513 CACCTGGACTGTGGATTGTC 58.186 55.000 0.00 0.00 0.00 3.18
21 22 0.321671 ACCTGGACTGTGGATTGTCG 59.678 55.000 0.00 0.00 34.31 4.35
22 23 0.321671 CCTGGACTGTGGATTGTCGT 59.678 55.000 0.00 0.00 34.31 4.34
23 24 1.270839 CCTGGACTGTGGATTGTCGTT 60.271 52.381 0.00 0.00 34.31 3.85
24 25 2.028476 CCTGGACTGTGGATTGTCGTTA 60.028 50.000 0.00 0.00 34.31 3.18
25 26 2.993899 CTGGACTGTGGATTGTCGTTAC 59.006 50.000 0.00 0.00 34.31 2.50
26 27 2.631062 TGGACTGTGGATTGTCGTTACT 59.369 45.455 0.00 0.00 34.31 2.24
27 28 3.070446 TGGACTGTGGATTGTCGTTACTT 59.930 43.478 0.00 0.00 34.31 2.24
28 29 4.062991 GGACTGTGGATTGTCGTTACTTT 58.937 43.478 0.00 0.00 34.31 2.66
29 30 5.221481 TGGACTGTGGATTGTCGTTACTTTA 60.221 40.000 0.00 0.00 34.31 1.85
30 31 5.873164 GGACTGTGGATTGTCGTTACTTTAT 59.127 40.000 0.00 0.00 34.31 1.40
31 32 7.037438 GGACTGTGGATTGTCGTTACTTTATA 58.963 38.462 0.00 0.00 34.31 0.98
32 33 7.709613 GGACTGTGGATTGTCGTTACTTTATAT 59.290 37.037 0.00 0.00 34.31 0.86
33 34 9.740239 GACTGTGGATTGTCGTTACTTTATATA 57.260 33.333 0.00 0.00 0.00 0.86
52 53 9.754382 TTTATATATAAAACGAGACGAAAGCCT 57.246 29.630 14.26 0.00 29.93 4.58
53 54 9.754382 TTATATATAAAACGAGACGAAAGCCTT 57.246 29.630 2.56 0.00 0.00 4.35
54 55 6.980051 ATATAAAACGAGACGAAAGCCTTT 57.020 33.333 0.00 0.00 0.00 3.11
55 56 5.684550 ATAAAACGAGACGAAAGCCTTTT 57.315 34.783 0.00 0.00 0.00 2.27
56 57 4.365899 AAAACGAGACGAAAGCCTTTTT 57.634 36.364 0.00 0.00 0.00 1.94
57 58 3.604065 AACGAGACGAAAGCCTTTTTC 57.396 42.857 0.00 0.00 0.00 2.29
58 59 2.557317 ACGAGACGAAAGCCTTTTTCA 58.443 42.857 0.00 0.00 0.00 2.69
59 60 2.940410 ACGAGACGAAAGCCTTTTTCAA 59.060 40.909 0.00 0.00 0.00 2.69
60 61 3.242641 ACGAGACGAAAGCCTTTTTCAAC 60.243 43.478 0.00 0.00 0.00 3.18
61 62 3.242608 CGAGACGAAAGCCTTTTTCAACA 60.243 43.478 0.00 0.00 0.00 3.33
62 63 4.668289 GAGACGAAAGCCTTTTTCAACAA 58.332 39.130 0.00 0.00 0.00 2.83
63 64 5.262588 AGACGAAAGCCTTTTTCAACAAT 57.737 34.783 0.00 0.00 0.00 2.71
64 65 5.043248 AGACGAAAGCCTTTTTCAACAATG 58.957 37.500 0.00 0.00 0.00 2.82
65 66 5.004922 ACGAAAGCCTTTTTCAACAATGA 57.995 34.783 0.00 0.00 0.00 2.57
66 67 5.600696 ACGAAAGCCTTTTTCAACAATGAT 58.399 33.333 0.00 0.00 34.96 2.45
67 68 6.744112 ACGAAAGCCTTTTTCAACAATGATA 58.256 32.000 0.00 0.00 34.96 2.15
68 69 7.378181 ACGAAAGCCTTTTTCAACAATGATAT 58.622 30.769 0.00 0.00 34.96 1.63
69 70 7.329226 ACGAAAGCCTTTTTCAACAATGATATG 59.671 33.333 0.00 0.00 34.96 1.78
70 71 7.201461 CGAAAGCCTTTTTCAACAATGATATGG 60.201 37.037 0.00 0.00 34.96 2.74
71 72 6.855763 AGCCTTTTTCAACAATGATATGGA 57.144 33.333 0.00 0.00 34.96 3.41
72 73 6.870769 AGCCTTTTTCAACAATGATATGGAG 58.129 36.000 0.00 0.00 34.96 3.86
73 74 6.664816 AGCCTTTTTCAACAATGATATGGAGA 59.335 34.615 0.00 0.00 34.96 3.71
74 75 7.343833 AGCCTTTTTCAACAATGATATGGAGAT 59.656 33.333 0.00 0.00 34.96 2.75
75 76 8.632679 GCCTTTTTCAACAATGATATGGAGATA 58.367 33.333 0.00 0.00 34.96 1.98
93 94 8.229253 TGGAGATAAATAGTACGTCTAAAGCA 57.771 34.615 0.00 0.00 31.94 3.91
94 95 8.689061 TGGAGATAAATAGTACGTCTAAAGCAA 58.311 33.333 0.00 0.00 31.94 3.91
95 96 9.182933 GGAGATAAATAGTACGTCTAAAGCAAG 57.817 37.037 0.00 0.00 31.94 4.01
96 97 9.182933 GAGATAAATAGTACGTCTAAAGCAAGG 57.817 37.037 0.00 0.00 31.94 3.61
97 98 8.693625 AGATAAATAGTACGTCTAAAGCAAGGT 58.306 33.333 0.00 0.00 31.94 3.50
98 99 9.956720 GATAAATAGTACGTCTAAAGCAAGGTA 57.043 33.333 0.00 0.00 31.94 3.08
100 101 8.699283 AAATAGTACGTCTAAAGCAAGGTAAG 57.301 34.615 0.00 0.00 31.94 2.34
101 102 4.492611 AGTACGTCTAAAGCAAGGTAAGC 58.507 43.478 0.00 0.00 0.00 3.09
102 103 3.396260 ACGTCTAAAGCAAGGTAAGCA 57.604 42.857 0.00 0.00 0.00 3.91
103 104 3.064931 ACGTCTAAAGCAAGGTAAGCAC 58.935 45.455 0.00 0.00 0.00 4.40
122 123 2.366916 CACTAAGCAGCTACTATGGCCT 59.633 50.000 3.32 0.00 0.00 5.19
126 127 0.250640 GCAGCTACTATGGCCTGCAT 60.251 55.000 3.32 0.00 35.54 3.96
133 134 0.816825 CTATGGCCTGCATGCGTTCT 60.817 55.000 14.09 0.00 0.00 3.01
143 144 1.401539 GCATGCGTTCTTCAAAGGTCC 60.402 52.381 0.00 0.00 0.00 4.46
144 145 1.200020 CATGCGTTCTTCAAAGGTCCC 59.800 52.381 0.00 0.00 0.00 4.46
159 160 1.070105 TCCCCGACACCAAAGAACG 59.930 57.895 0.00 0.00 0.00 3.95
188 189 2.334946 GGCTGCCGTGCTCATTTGA 61.335 57.895 1.35 0.00 0.00 2.69
217 218 9.148104 GGAACGAACCACATAAATATATACTCC 57.852 37.037 0.00 0.00 0.00 3.85
218 219 9.148104 GAACGAACCACATAAATATATACTCCC 57.852 37.037 0.00 0.00 0.00 4.30
220 221 8.529476 ACGAACCACATAAATATATACTCCCTC 58.471 37.037 0.00 0.00 0.00 4.30
221 222 7.980099 CGAACCACATAAATATATACTCCCTCC 59.020 40.741 0.00 0.00 0.00 4.30
222 223 7.419711 ACCACATAAATATATACTCCCTCCG 57.580 40.000 0.00 0.00 0.00 4.63
223 224 6.958192 ACCACATAAATATATACTCCCTCCGT 59.042 38.462 0.00 0.00 0.00 4.69
224 225 7.456902 ACCACATAAATATATACTCCCTCCGTT 59.543 37.037 0.00 0.00 0.00 4.44
225 226 8.319146 CCACATAAATATATACTCCCTCCGTTT 58.681 37.037 0.00 0.00 0.00 3.60
226 227 9.367444 CACATAAATATATACTCCCTCCGTTTC 57.633 37.037 0.00 0.00 0.00 2.78
227 228 9.322769 ACATAAATATATACTCCCTCCGTTTCT 57.677 33.333 0.00 0.00 0.00 2.52
237 238 7.613551 ACTCCCTCCGTTTCTAAATATATGT 57.386 36.000 0.00 0.00 0.00 2.29
238 239 7.442656 ACTCCCTCCGTTTCTAAATATATGTG 58.557 38.462 0.00 0.00 0.00 3.21
239 240 7.070821 ACTCCCTCCGTTTCTAAATATATGTGT 59.929 37.037 0.00 0.00 0.00 3.72
240 241 7.798071 TCCCTCCGTTTCTAAATATATGTGTT 58.202 34.615 0.00 0.00 0.00 3.32
241 242 8.269317 TCCCTCCGTTTCTAAATATATGTGTTT 58.731 33.333 0.00 0.00 0.00 2.83
242 243 8.899771 CCCTCCGTTTCTAAATATATGTGTTTT 58.100 33.333 0.00 0.00 0.00 2.43
308 309 9.538508 AACGTATTTTAGAGTGTAAACTCACTT 57.461 29.630 15.56 0.00 46.81 3.16
319 320 9.968743 GAGTGTAAACTCACTTATTTTATTCCG 57.031 33.333 8.27 0.00 46.81 4.30
320 321 9.498176 AGTGTAAACTCACTTATTTTATTCCGT 57.502 29.630 0.00 0.00 44.92 4.69
367 368 9.321562 TCTAAGAAAACTTATATTTAGGCACGG 57.678 33.333 0.00 0.00 0.00 4.94
368 369 9.321562 CTAAGAAAACTTATATTTAGGCACGGA 57.678 33.333 0.00 0.00 0.00 4.69
369 370 7.787725 AGAAAACTTATATTTAGGCACGGAG 57.212 36.000 0.00 0.00 0.00 4.63
370 371 6.766467 AGAAAACTTATATTTAGGCACGGAGG 59.234 38.462 0.00 0.00 0.00 4.30
371 372 5.881923 AACTTATATTTAGGCACGGAGGA 57.118 39.130 0.00 0.00 0.00 3.71
372 373 5.881923 ACTTATATTTAGGCACGGAGGAA 57.118 39.130 0.00 0.00 0.00 3.36
373 374 5.855045 ACTTATATTTAGGCACGGAGGAAG 58.145 41.667 0.00 0.00 0.00 3.46
374 375 5.365895 ACTTATATTTAGGCACGGAGGAAGT 59.634 40.000 0.00 0.00 0.00 3.01
375 376 6.552350 ACTTATATTTAGGCACGGAGGAAGTA 59.448 38.462 0.00 0.00 0.00 2.24
376 377 5.881923 ATATTTAGGCACGGAGGAAGTAA 57.118 39.130 0.00 0.00 0.00 2.24
377 378 4.563140 ATTTAGGCACGGAGGAAGTAAA 57.437 40.909 0.00 0.00 0.00 2.01
378 379 4.354893 TTTAGGCACGGAGGAAGTAAAA 57.645 40.909 0.00 0.00 0.00 1.52
379 380 2.943036 AGGCACGGAGGAAGTAAAAA 57.057 45.000 0.00 0.00 0.00 1.94
380 381 3.434940 AGGCACGGAGGAAGTAAAAAT 57.565 42.857 0.00 0.00 0.00 1.82
381 382 3.763057 AGGCACGGAGGAAGTAAAAATT 58.237 40.909 0.00 0.00 0.00 1.82
382 383 3.756963 AGGCACGGAGGAAGTAAAAATTC 59.243 43.478 0.00 0.00 0.00 2.17
383 384 3.425758 GGCACGGAGGAAGTAAAAATTCG 60.426 47.826 0.00 0.00 0.00 3.34
384 385 3.434299 GCACGGAGGAAGTAAAAATTCGA 59.566 43.478 0.00 0.00 0.00 3.71
385 386 4.435651 GCACGGAGGAAGTAAAAATTCGAG 60.436 45.833 0.00 0.00 0.00 4.04
386 387 4.927425 CACGGAGGAAGTAAAAATTCGAGA 59.073 41.667 0.00 0.00 0.00 4.04
387 388 5.062308 CACGGAGGAAGTAAAAATTCGAGAG 59.938 44.000 0.00 0.00 0.00 3.20
388 389 5.047519 ACGGAGGAAGTAAAAATTCGAGAGA 60.048 40.000 0.00 0.00 39.20 3.10
401 402 2.972625 TCGAGAGAAAAATGGATGCGT 58.027 42.857 0.00 0.00 37.03 5.24
404 405 4.112634 CGAGAGAAAAATGGATGCGTAGA 58.887 43.478 0.00 0.00 0.00 2.59
416 417 6.993786 TGGATGCGTAGAAACATTTGATAA 57.006 33.333 0.00 0.00 0.00 1.75
491 495 9.412460 AGATAAGATGCAAGAATAATGGACAAA 57.588 29.630 0.00 0.00 0.00 2.83
492 496 9.455847 GATAAGATGCAAGAATAATGGACAAAC 57.544 33.333 0.00 0.00 0.00 2.93
510 514 8.410141 TGGACAAACCAAACTATTTCTTAACTG 58.590 33.333 0.00 0.00 46.75 3.16
514 518 8.852135 CAAACCAAACTATTTCTTAACTGGGTA 58.148 33.333 0.00 0.00 0.00 3.69
515 519 9.596308 AAACCAAACTATTTCTTAACTGGGTAT 57.404 29.630 0.00 0.00 0.00 2.73
517 521 9.596308 ACCAAACTATTTCTTAACTGGGTATTT 57.404 29.630 0.00 0.00 0.00 1.40
545 549 7.938563 TTCAACTAATTACAATTGCAACCAC 57.061 32.000 0.00 0.00 0.00 4.16
551 555 4.517952 TTACAATTGCAACCACTCCATG 57.482 40.909 0.00 0.00 0.00 3.66
553 557 3.495331 ACAATTGCAACCACTCCATGTA 58.505 40.909 0.00 0.00 0.00 2.29
554 558 4.088634 ACAATTGCAACCACTCCATGTAT 58.911 39.130 0.00 0.00 0.00 2.29
555 559 4.158394 ACAATTGCAACCACTCCATGTATC 59.842 41.667 0.00 0.00 0.00 2.24
556 560 2.418368 TGCAACCACTCCATGTATCC 57.582 50.000 0.00 0.00 0.00 2.59
558 562 2.241941 TGCAACCACTCCATGTATCCAT 59.758 45.455 0.00 0.00 0.00 3.41
559 563 2.620115 GCAACCACTCCATGTATCCATG 59.380 50.000 0.00 0.00 46.65 3.66
561 565 4.272489 CAACCACTCCATGTATCCATGTT 58.728 43.478 0.00 0.00 45.83 2.71
563 567 3.523157 ACCACTCCATGTATCCATGTTGA 59.477 43.478 0.00 0.00 45.83 3.18
564 568 3.879295 CCACTCCATGTATCCATGTTGAC 59.121 47.826 0.00 0.00 45.83 3.18
565 569 4.384537 CCACTCCATGTATCCATGTTGACT 60.385 45.833 0.00 0.00 45.83 3.41
567 571 5.987953 CACTCCATGTATCCATGTTGACTAG 59.012 44.000 0.00 0.00 45.83 2.57
569 573 6.156949 ACTCCATGTATCCATGTTGACTAGTT 59.843 38.462 0.00 0.00 45.83 2.24
571 575 5.008019 CCATGTATCCATGTTGACTAGTTGC 59.992 44.000 0.00 0.00 45.83 4.17
572 576 5.159273 TGTATCCATGTTGACTAGTTGCA 57.841 39.130 0.00 0.00 0.00 4.08
573 577 5.555966 TGTATCCATGTTGACTAGTTGCAA 58.444 37.500 0.00 0.00 0.00 4.08
576 580 5.375417 TCCATGTTGACTAGTTGCAATTG 57.625 39.130 0.59 0.00 0.00 2.32
578 582 6.000840 TCCATGTTGACTAGTTGCAATTGTA 58.999 36.000 0.59 0.00 0.00 2.41
580 584 7.176515 TCCATGTTGACTAGTTGCAATTGTAAT 59.823 33.333 12.26 4.70 0.00 1.89
581 585 7.485913 CCATGTTGACTAGTTGCAATTGTAATC 59.514 37.037 12.26 6.47 0.00 1.75
582 586 7.744087 TGTTGACTAGTTGCAATTGTAATCT 57.256 32.000 12.26 12.68 0.00 2.40
583 587 7.584108 TGTTGACTAGTTGCAATTGTAATCTG 58.416 34.615 12.26 7.76 0.00 2.90
584 588 6.741992 TGACTAGTTGCAATTGTAATCTGG 57.258 37.500 12.26 13.92 0.00 3.86
585 589 5.123820 TGACTAGTTGCAATTGTAATCTGGC 59.876 40.000 12.26 7.96 0.00 4.85
589 593 6.199937 AGTTGCAATTGTAATCTGGCTTAG 57.800 37.500 12.26 0.00 0.00 2.18
590 594 5.711976 AGTTGCAATTGTAATCTGGCTTAGT 59.288 36.000 12.26 0.00 0.00 2.24
591 595 5.818136 TGCAATTGTAATCTGGCTTAGTC 57.182 39.130 7.40 0.00 0.00 2.59
592 596 5.252547 TGCAATTGTAATCTGGCTTAGTCA 58.747 37.500 7.40 0.00 0.00 3.41
593 597 5.887598 TGCAATTGTAATCTGGCTTAGTCAT 59.112 36.000 7.40 0.00 0.00 3.06
594 598 6.183360 TGCAATTGTAATCTGGCTTAGTCATG 60.183 38.462 7.40 0.00 0.00 3.07
595 599 6.183360 GCAATTGTAATCTGGCTTAGTCATGT 60.183 38.462 7.40 0.00 0.00 3.21
596 600 7.629222 GCAATTGTAATCTGGCTTAGTCATGTT 60.629 37.037 7.40 0.00 0.00 2.71
598 602 6.741992 TGTAATCTGGCTTAGTCATGTTTG 57.258 37.500 0.00 0.00 0.00 2.93
601 605 5.886960 ATCTGGCTTAGTCATGTTTGAAC 57.113 39.130 0.00 0.00 32.48 3.18
602 606 4.973168 TCTGGCTTAGTCATGTTTGAACT 58.027 39.130 0.00 0.00 32.48 3.01
603 607 4.997395 TCTGGCTTAGTCATGTTTGAACTC 59.003 41.667 0.00 0.00 32.48 3.01
604 608 3.745975 TGGCTTAGTCATGTTTGAACTCG 59.254 43.478 0.00 0.00 32.48 4.18
605 609 3.994392 GGCTTAGTCATGTTTGAACTCGA 59.006 43.478 0.00 0.00 32.48 4.04
606 610 4.092091 GGCTTAGTCATGTTTGAACTCGAG 59.908 45.833 11.84 11.84 32.48 4.04
607 611 4.923871 GCTTAGTCATGTTTGAACTCGAGA 59.076 41.667 21.68 0.00 32.48 4.04
608 612 5.405571 GCTTAGTCATGTTTGAACTCGAGAA 59.594 40.000 21.68 0.00 32.48 2.87
609 613 6.073765 GCTTAGTCATGTTTGAACTCGAGAAA 60.074 38.462 21.68 6.55 32.48 2.52
610 614 5.659048 AGTCATGTTTGAACTCGAGAAAC 57.341 39.130 21.68 18.80 32.48 2.78
611 615 5.360591 AGTCATGTTTGAACTCGAGAAACT 58.639 37.500 21.68 6.85 32.48 2.66
612 616 5.235186 AGTCATGTTTGAACTCGAGAAACTG 59.765 40.000 21.68 16.73 32.48 3.16
613 617 5.234329 GTCATGTTTGAACTCGAGAAACTGA 59.766 40.000 21.68 18.36 32.48 3.41
615 619 3.550275 TGTTTGAACTCGAGAAACTGACG 59.450 43.478 21.68 0.00 32.01 4.35
616 620 1.767289 TGAACTCGAGAAACTGACGC 58.233 50.000 21.68 0.00 0.00 5.19
618 622 0.387929 AACTCGAGAAACTGACGCCA 59.612 50.000 21.68 0.00 0.00 5.69
619 623 0.318784 ACTCGAGAAACTGACGCCAC 60.319 55.000 21.68 0.00 0.00 5.01
620 624 1.006571 TCGAGAAACTGACGCCACC 60.007 57.895 0.00 0.00 0.00 4.61
622 626 0.600255 CGAGAAACTGACGCCACCTT 60.600 55.000 0.00 0.00 0.00 3.50
623 627 1.336517 CGAGAAACTGACGCCACCTTA 60.337 52.381 0.00 0.00 0.00 2.69
624 628 2.762745 GAGAAACTGACGCCACCTTAA 58.237 47.619 0.00 0.00 0.00 1.85
626 630 3.335579 AGAAACTGACGCCACCTTAATC 58.664 45.455 0.00 0.00 0.00 1.75
627 631 2.109425 AACTGACGCCACCTTAATCC 57.891 50.000 0.00 0.00 0.00 3.01
668 974 3.382227 TGACCAGTTCAAACACGACTAGA 59.618 43.478 0.00 0.00 0.00 2.43
674 980 7.117812 ACCAGTTCAAACACGACTAGATTTATG 59.882 37.037 0.00 0.00 0.00 1.90
676 982 8.708742 CAGTTCAAACACGACTAGATTTATGAA 58.291 33.333 0.00 0.00 0.00 2.57
677 983 8.709646 AGTTCAAACACGACTAGATTTATGAAC 58.290 33.333 0.00 8.30 0.00 3.18
678 984 7.273188 TCAAACACGACTAGATTTATGAACG 57.727 36.000 0.00 0.00 0.00 3.95
685 991 7.644157 CACGACTAGATTTATGAACGAATCTCA 59.356 37.037 0.00 0.00 40.69 3.27
686 992 8.188799 ACGACTAGATTTATGAACGAATCTCAA 58.811 33.333 0.00 0.00 40.69 3.02
687 993 9.020813 CGACTAGATTTATGAACGAATCTCAAA 57.979 33.333 0.00 0.00 40.69 2.69
694 1000 8.781067 TTTATGAACGAATCTCAAACAGTTTG 57.219 30.769 18.62 18.62 41.96 2.93
696 1002 4.095632 TGAACGAATCTCAAACAGTTTGCA 59.904 37.500 19.70 9.98 40.43 4.08
890 1209 2.511600 CCTCCGCGCTAGGGTTTG 60.512 66.667 15.87 0.00 0.00 2.93
1053 1378 1.613437 CAAATCCTTTGGGTTGCTCGT 59.387 47.619 0.00 0.00 37.01 4.18
1070 1395 1.691976 TCGTGTTCCTGGTGTTCTGAT 59.308 47.619 0.00 0.00 0.00 2.90
1220 1545 1.797025 GCGCCTCCAAGGTATACATC 58.203 55.000 5.01 0.00 37.80 3.06
1221 1546 1.344763 GCGCCTCCAAGGTATACATCT 59.655 52.381 5.01 0.00 37.80 2.90
1222 1547 2.868044 GCGCCTCCAAGGTATACATCTG 60.868 54.545 5.01 0.00 37.80 2.90
1293 1618 3.489785 GCGTATGGTTCAGATTAGTTCCG 59.510 47.826 0.00 0.00 0.00 4.30
1382 1722 5.011431 TGGAATTGCATCTATCTGATCTCGT 59.989 40.000 0.00 0.00 32.05 4.18
1385 1725 5.718724 TTGCATCTATCTGATCTCGTCAT 57.281 39.130 0.00 0.00 35.97 3.06
1407 1747 1.485210 GGCCTATCCTATCTGGGGTGT 60.485 57.143 0.00 0.00 36.20 4.16
1408 1748 1.903183 GCCTATCCTATCTGGGGTGTC 59.097 57.143 0.00 0.00 36.20 3.67
1419 1759 1.978580 CTGGGGTGTCTCCTTTGTAGT 59.021 52.381 0.00 0.00 36.25 2.73
1442 1782 1.586422 CTTGTAGGACATGCATCGGG 58.414 55.000 0.00 0.00 0.00 5.14
1448 1788 1.097547 GGACATGCATCGGGTTCTGG 61.098 60.000 0.00 0.00 0.00 3.86
1450 1790 0.038166 ACATGCATCGGGTTCTGGTT 59.962 50.000 0.00 0.00 0.00 3.67
1464 1804 2.182827 TCTGGTTCTGATGCTGCTACT 58.817 47.619 0.00 0.00 0.00 2.57
1465 1805 2.568956 TCTGGTTCTGATGCTGCTACTT 59.431 45.455 0.00 0.00 0.00 2.24
1477 1934 2.095718 GCTGCTACTTTGTAACCACTGC 60.096 50.000 0.00 0.00 0.00 4.40
1483 1940 3.886123 ACTTTGTAACCACTGCTGTCTT 58.114 40.909 0.00 0.00 0.00 3.01
1486 1943 1.488812 TGTAACCACTGCTGTCTTGGT 59.511 47.619 0.00 0.00 45.95 3.67
1513 1970 3.440173 TCAATCGTTTCTGCTCCATTTCC 59.560 43.478 0.00 0.00 0.00 3.13
1530 1987 6.443849 TCCATTTCCCTAGTTGTAGATTGACT 59.556 38.462 0.00 0.00 0.00 3.41
1546 2003 7.440523 AGATTGACTTTAATCAGTGTTGTCC 57.559 36.000 0.00 0.00 39.08 4.02
1547 2004 5.666969 TTGACTTTAATCAGTGTTGTCCG 57.333 39.130 0.00 0.00 0.00 4.79
1569 2026 3.396560 AGTGGCACCGAGTAGTTAAAAC 58.603 45.455 15.27 0.00 0.00 2.43
1577 2034 6.620089 GCACCGAGTAGTTAAAACTGATTTCC 60.620 42.308 5.62 0.00 40.07 3.13
1626 2084 5.279384 CAGCTTAACTGCCAATCATTGATC 58.721 41.667 0.00 0.00 40.19 2.92
1642 2100 6.718388 TCATTGATCGATGTTAACTGCATTC 58.282 36.000 20.24 0.02 0.00 2.67
1643 2101 5.484173 TTGATCGATGTTAACTGCATTCC 57.516 39.130 0.54 0.00 0.00 3.01
1789 2265 7.600065 TCCTAATAGGAACGATATTGTGCTAC 58.400 38.462 6.54 0.00 42.51 3.58
1841 2317 5.164954 GGTATCAGGCGTAATGAGAAGATC 58.835 45.833 0.00 0.00 0.00 2.75
2040 2757 1.013596 TGTCAACTCGGTGCTTGTTG 58.986 50.000 0.00 0.00 41.46 3.33
2118 3003 7.715657 AGTAGCTGAGATCAAAATCACTAGAG 58.284 38.462 0.00 0.00 34.07 2.43
2125 3010 7.065120 AGATCAAAATCACTAGAGCAGCTAT 57.935 36.000 0.00 0.00 34.07 2.97
2141 3026 6.520272 AGCAGCTATATAGGAACTGTTTGAG 58.480 40.000 11.72 0.00 41.52 3.02
2145 3030 8.200792 CAGCTATATAGGAACTGTTTGAGAGTT 58.799 37.037 11.72 0.00 41.52 3.01
2155 3040 3.717707 TGTTTGAGAGTTGAGAACCGAG 58.282 45.455 0.00 0.00 0.00 4.63
2158 3043 2.865079 TGAGAGTTGAGAACCGAGACT 58.135 47.619 0.00 0.00 0.00 3.24
2167 3052 5.661056 TGAGAACCGAGACTGATATTTGT 57.339 39.130 0.00 0.00 0.00 2.83
2174 3059 4.979197 CCGAGACTGATATTTGTCTGTAGC 59.021 45.833 13.85 2.53 42.79 3.58
2204 3090 5.407049 AGGGGCTACATATCATTAGTCAGT 58.593 41.667 0.00 0.00 0.00 3.41
2225 3111 9.362539 GTCAGTTACTCTAATCGTTAAATTCCA 57.637 33.333 0.00 0.00 0.00 3.53
2292 3184 7.231317 TGGTTAGATTAAATGGGCTGAATCATC 59.769 37.037 0.00 0.00 31.92 2.92
2421 3333 7.701539 TCTTGGCACTGTTAATATTTGACAT 57.298 32.000 0.00 0.00 0.00 3.06
2617 3544 2.483106 GCTGATAGCACACCTGCATATG 59.517 50.000 0.00 0.00 46.97 1.78
2619 3546 3.995048 CTGATAGCACACCTGCATATGAG 59.005 47.826 6.97 1.15 46.97 2.90
2696 3623 7.336396 ACTAACCATGTTTCCTTATCAGGTAC 58.664 38.462 0.00 0.00 41.69 3.34
2920 3847 7.327214 AGCTCTCTTTAGACCTTGAGTTAATG 58.673 38.462 0.00 0.00 0.00 1.90
2962 3889 7.663827 TGGATATGTATGTTACCTAGAAACCG 58.336 38.462 0.00 0.00 0.00 4.44
3057 3985 6.314152 GGCTCACTACTGTTTTATCCTCTTTC 59.686 42.308 0.00 0.00 0.00 2.62
3108 4036 2.183679 TGACCTGCCTTTTGTTTGGTT 58.816 42.857 0.00 0.00 0.00 3.67
3128 4056 7.883391 TGGTTACTCTCGAATCTTCTCTAAT 57.117 36.000 0.00 0.00 0.00 1.73
3166 4095 1.356527 GAATTTCGTGCGCCCTACGT 61.357 55.000 16.86 0.00 46.11 3.57
3184 4113 5.692204 CCTACGTGATGACCATTGTATCTTC 59.308 44.000 0.00 0.00 0.00 2.87
3193 4122 4.406456 ACCATTGTATCTTCCAAGTTGCA 58.594 39.130 0.00 0.00 0.00 4.08
3194 4123 4.832266 ACCATTGTATCTTCCAAGTTGCAA 59.168 37.500 0.00 0.00 35.71 4.08
3195 4124 5.163513 CCATTGTATCTTCCAAGTTGCAAC 58.836 41.667 22.17 22.17 34.65 4.17
3196 4125 4.846779 TTGTATCTTCCAAGTTGCAACC 57.153 40.909 25.62 8.37 29.41 3.77
3209 4228 6.378280 CCAAGTTGCAACCTCTTCCTTATATT 59.622 38.462 25.62 6.03 0.00 1.28
3212 4231 8.056407 AGTTGCAACCTCTTCCTTATATTTTC 57.944 34.615 25.62 0.00 0.00 2.29
3233 4252 0.734889 CCATTTACGCAGCTGGAAGG 59.265 55.000 17.12 0.00 0.00 3.46
3234 4253 0.099436 CATTTACGCAGCTGGAAGGC 59.901 55.000 17.12 0.00 0.00 4.35
3237 4256 0.322456 TTACGCAGCTGGAAGGCATT 60.322 50.000 17.12 0.00 34.17 3.56
3248 4500 4.640201 GCTGGAAGGCATTCATTACTGTTA 59.360 41.667 13.81 0.00 37.15 2.41
3253 4505 6.599638 GGAAGGCATTCATTACTGTTACTCTT 59.400 38.462 13.81 0.00 37.15 2.85
3274 4526 8.787852 ACTCTTTTCTGAAGATATGAAACCAAC 58.212 33.333 0.00 0.00 30.66 3.77
3275 4527 8.110860 TCTTTTCTGAAGATATGAAACCAACC 57.889 34.615 0.00 0.00 30.66 3.77
3276 4528 7.944554 TCTTTTCTGAAGATATGAAACCAACCT 59.055 33.333 0.00 0.00 30.66 3.50
3277 4529 9.231297 CTTTTCTGAAGATATGAAACCAACCTA 57.769 33.333 0.00 0.00 30.66 3.08
3278 4530 8.792830 TTTCTGAAGATATGAAACCAACCTAG 57.207 34.615 0.00 0.00 0.00 3.02
3279 4531 7.733773 TCTGAAGATATGAAACCAACCTAGA 57.266 36.000 0.00 0.00 0.00 2.43
3280 4532 8.146053 TCTGAAGATATGAAACCAACCTAGAA 57.854 34.615 0.00 0.00 0.00 2.10
3281 4533 8.041323 TCTGAAGATATGAAACCAACCTAGAAC 58.959 37.037 0.00 0.00 0.00 3.01
3282 4534 7.918076 TGAAGATATGAAACCAACCTAGAACT 58.082 34.615 0.00 0.00 0.00 3.01
3283 4535 7.824289 TGAAGATATGAAACCAACCTAGAACTG 59.176 37.037 0.00 0.00 0.00 3.16
3284 4536 7.259088 AGATATGAAACCAACCTAGAACTGT 57.741 36.000 0.00 0.00 0.00 3.55
3285 4537 8.375493 AGATATGAAACCAACCTAGAACTGTA 57.625 34.615 0.00 0.00 0.00 2.74
3286 4538 8.822805 AGATATGAAACCAACCTAGAACTGTAA 58.177 33.333 0.00 0.00 0.00 2.41
3287 4539 9.444600 GATATGAAACCAACCTAGAACTGTAAA 57.555 33.333 0.00 0.00 0.00 2.01
3288 4540 9.975218 ATATGAAACCAACCTAGAACTGTAAAT 57.025 29.630 0.00 0.00 0.00 1.40
3290 4542 9.975218 ATGAAACCAACCTAGAACTGTAAATAT 57.025 29.630 0.00 0.00 0.00 1.28
3291 4543 9.802039 TGAAACCAACCTAGAACTGTAAATATT 57.198 29.630 0.00 0.00 0.00 1.28
3299 4551 9.668497 ACCTAGAACTGTAAATATTTTCTCCAC 57.332 33.333 5.91 0.00 0.00 4.02
3300 4552 9.667107 CCTAGAACTGTAAATATTTTCTCCACA 57.333 33.333 5.91 3.47 0.00 4.17
3302 4554 8.029642 AGAACTGTAAATATTTTCTCCACACG 57.970 34.615 5.91 2.12 0.00 4.49
3303 4555 7.876068 AGAACTGTAAATATTTTCTCCACACGA 59.124 33.333 5.91 0.00 0.00 4.35
3304 4556 8.561738 AACTGTAAATATTTTCTCCACACGAT 57.438 30.769 5.91 0.00 0.00 3.73
3305 4557 7.974675 ACTGTAAATATTTTCTCCACACGATG 58.025 34.615 5.91 0.00 0.00 3.84
3306 4558 6.781138 TGTAAATATTTTCTCCACACGATGC 58.219 36.000 5.91 0.00 0.00 3.91
3307 4559 4.900635 AATATTTTCTCCACACGATGCC 57.099 40.909 0.00 0.00 0.00 4.40
3308 4560 1.086696 ATTTTCTCCACACGATGCCG 58.913 50.000 0.00 0.00 42.50 5.69
3309 4561 1.573829 TTTTCTCCACACGATGCCGC 61.574 55.000 0.00 0.00 39.95 6.53
3310 4562 2.723586 TTTCTCCACACGATGCCGCA 62.724 55.000 0.00 0.00 39.95 5.69
3311 4563 2.512286 CTCCACACGATGCCGCAT 60.512 61.111 5.28 5.28 39.95 4.73
3312 4564 1.227234 CTCCACACGATGCCGCATA 60.227 57.895 5.67 0.00 39.95 3.14
3313 4565 0.601046 CTCCACACGATGCCGCATAT 60.601 55.000 5.67 0.00 39.95 1.78
3314 4566 0.879839 TCCACACGATGCCGCATATG 60.880 55.000 5.67 10.40 39.95 1.78
3315 4567 1.159713 CCACACGATGCCGCATATGT 61.160 55.000 14.31 14.31 39.95 2.29
3316 4568 1.496934 CACACGATGCCGCATATGTA 58.503 50.000 18.00 0.00 39.95 2.29
3317 4569 1.864082 CACACGATGCCGCATATGTAA 59.136 47.619 18.00 0.00 39.95 2.41
3318 4570 2.286563 CACACGATGCCGCATATGTAAA 59.713 45.455 18.00 0.00 39.95 2.01
3319 4571 3.058983 CACACGATGCCGCATATGTAAAT 60.059 43.478 18.00 3.79 39.95 1.40
3320 4572 4.151512 CACACGATGCCGCATATGTAAATA 59.848 41.667 18.00 0.00 39.95 1.40
3321 4573 4.935205 ACACGATGCCGCATATGTAAATAT 59.065 37.500 17.27 0.00 39.95 1.28
3322 4574 5.411361 ACACGATGCCGCATATGTAAATATT 59.589 36.000 17.27 0.00 39.95 1.28
3323 4575 6.072728 ACACGATGCCGCATATGTAAATATTT 60.073 34.615 17.27 5.89 39.95 1.40
3324 4576 6.801377 CACGATGCCGCATATGTAAATATTTT 59.199 34.615 5.67 0.00 39.95 1.82
3325 4577 7.007367 CACGATGCCGCATATGTAAATATTTTC 59.993 37.037 5.67 1.70 39.95 2.29
3326 4578 7.094805 ACGATGCCGCATATGTAAATATTTTCT 60.095 33.333 5.67 0.00 39.95 2.52
3327 4579 8.387354 CGATGCCGCATATGTAAATATTTTCTA 58.613 33.333 5.67 0.00 0.00 2.10
3328 4580 9.490663 GATGCCGCATATGTAAATATTTTCTAC 57.509 33.333 5.67 0.00 0.00 2.59
3329 4581 8.384607 TGCCGCATATGTAAATATTTTCTACA 57.615 30.769 5.91 5.41 0.00 2.74
3330 4582 8.286800 TGCCGCATATGTAAATATTTTCTACAC 58.713 33.333 5.91 0.00 0.00 2.90
3331 4583 7.749126 GCCGCATATGTAAATATTTTCTACACC 59.251 37.037 5.91 0.00 0.00 4.16
3332 4584 8.234546 CCGCATATGTAAATATTTTCTACACCC 58.765 37.037 5.91 0.00 0.00 4.61
3333 4585 7.955324 CGCATATGTAAATATTTTCTACACCCG 59.045 37.037 5.91 3.26 0.00 5.28
3334 4586 8.780249 GCATATGTAAATATTTTCTACACCCGT 58.220 33.333 5.91 0.00 0.00 5.28
3340 4592 9.476761 GTAAATATTTTCTACACCCGTTTTACG 57.523 33.333 5.91 0.00 42.11 3.18
3341 4593 7.671495 AATATTTTCTACACCCGTTTTACGT 57.329 32.000 0.00 0.00 40.58 3.57
3342 4594 7.671495 ATATTTTCTACACCCGTTTTACGTT 57.329 32.000 0.00 0.00 40.58 3.99
3343 4595 5.809719 TTTTCTACACCCGTTTTACGTTT 57.190 34.783 0.00 0.00 40.58 3.60
3344 4596 4.792528 TTCTACACCCGTTTTACGTTTG 57.207 40.909 0.00 0.00 40.58 2.93
3345 4597 4.052159 TCTACACCCGTTTTACGTTTGA 57.948 40.909 0.00 0.00 40.58 2.69
3346 4598 4.437239 TCTACACCCGTTTTACGTTTGAA 58.563 39.130 0.00 0.00 40.58 2.69
3347 4599 4.872691 TCTACACCCGTTTTACGTTTGAAA 59.127 37.500 0.00 0.00 40.58 2.69
3348 4600 3.757184 ACACCCGTTTTACGTTTGAAAC 58.243 40.909 0.00 2.53 40.58 2.78
3420 4699 4.701956 AATTTCATGACGGAATGACACC 57.298 40.909 0.00 0.00 36.31 4.16
3421 4700 3.417069 TTTCATGACGGAATGACACCT 57.583 42.857 0.00 0.00 36.31 4.00
3423 4702 1.623311 TCATGACGGAATGACACCTGT 59.377 47.619 0.00 0.00 31.58 4.00
3425 4704 3.119137 TCATGACGGAATGACACCTGTAG 60.119 47.826 0.00 0.00 31.58 2.74
3426 4705 2.244695 TGACGGAATGACACCTGTAGT 58.755 47.619 0.00 0.00 0.00 2.73
3442 4721 7.603651 CACCTGTAGTGTAGAAAATACAGTCT 58.396 38.462 9.97 0.00 42.22 3.24
3445 4724 8.304596 CCTGTAGTGTAGAAAATACAGTCTGAA 58.695 37.037 6.91 0.00 42.22 3.02
3461 4740 8.289939 ACAGTCTGAACTTATTATTCCGTAGA 57.710 34.615 6.91 0.00 31.71 2.59
3491 4815 2.426738 TCATTTTTGCCTAGAATGCCCG 59.573 45.455 0.00 0.00 32.28 6.13
3502 4826 1.666209 GAATGCCCGGGGTGTCATTG 61.666 60.000 25.28 0.00 30.19 2.82
3504 4828 2.750237 GCCCGGGGTGTCATTGAC 60.750 66.667 25.28 9.93 0.00 3.18
3506 4830 1.078426 CCCGGGGTGTCATTGACTC 60.078 63.158 14.71 13.43 33.15 3.36
3507 4831 1.676968 CCGGGGTGTCATTGACTCA 59.323 57.895 17.26 0.00 33.15 3.41
3509 4833 1.340017 CCGGGGTGTCATTGACTCATT 60.340 52.381 17.26 0.00 33.15 2.57
3510 4834 2.436417 CGGGGTGTCATTGACTCATTT 58.564 47.619 17.26 0.00 33.15 2.32
3514 4838 4.156739 GGGGTGTCATTGACTCATTTCTTC 59.843 45.833 17.26 0.55 33.15 2.87
3515 4839 4.142816 GGGTGTCATTGACTCATTTCTTCG 60.143 45.833 17.26 0.00 33.15 3.79
3517 4841 5.377358 GTGTCATTGACTCATTTCTTCGTG 58.623 41.667 17.26 0.00 33.15 4.35
3529 4869 7.441157 ACTCATTTCTTCGTGAAACTTCATACA 59.559 33.333 8.09 0.00 46.08 2.29
3533 4873 4.923871 TCTTCGTGAAACTTCATACAGAGC 59.076 41.667 0.00 0.00 39.73 4.09
3562 4902 6.186957 TGGTCAACCATGTTTGCTAGATATT 58.813 36.000 0.00 0.00 42.01 1.28
3564 4904 7.178274 TGGTCAACCATGTTTGCTAGATATTTT 59.822 33.333 0.00 0.00 42.01 1.82
3565 4905 7.702348 GGTCAACCATGTTTGCTAGATATTTTC 59.298 37.037 0.00 0.00 35.64 2.29
3591 4931 8.923609 TTTTTCAATTTTTCTGAATTTTGCCC 57.076 26.923 0.00 0.00 32.98 5.36
3677 5088 4.693566 CCGGTTTCTACTTGCTCAATGTTA 59.306 41.667 0.00 0.00 0.00 2.41
3722 5133 2.038387 AGTTTCGCTGTCAGTTTGGT 57.962 45.000 0.93 0.00 0.00 3.67
3757 5168 4.449743 GCGAAAGTTTATATGGTATGCCGA 59.550 41.667 0.00 0.00 37.67 5.54
3760 5171 7.672738 CGAAAGTTTATATGGTATGCCGATAC 58.327 38.462 0.00 0.00 37.67 2.24
3761 5172 7.329962 CGAAAGTTTATATGGTATGCCGATACA 59.670 37.037 0.00 0.00 36.85 2.29
3762 5173 9.162764 GAAAGTTTATATGGTATGCCGATACAT 57.837 33.333 0.00 0.00 36.85 2.29
3860 5278 1.202891 AGGTTAACCACAGCAAGTCCC 60.203 52.381 26.26 0.00 38.89 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.250901 ACAATCCACAGTCCAGGTGC 60.251 55.000 0.00 0.00 34.94 5.01
1 2 1.813513 GACAATCCACAGTCCAGGTG 58.186 55.000 0.00 0.00 36.03 4.00
2 3 0.321671 CGACAATCCACAGTCCAGGT 59.678 55.000 0.00 0.00 0.00 4.00
3 4 0.321671 ACGACAATCCACAGTCCAGG 59.678 55.000 0.00 0.00 0.00 4.45
5 6 2.631062 AGTAACGACAATCCACAGTCCA 59.369 45.455 0.00 0.00 0.00 4.02
6 7 3.314541 AGTAACGACAATCCACAGTCC 57.685 47.619 0.00 0.00 0.00 3.85
7 8 6.963049 ATAAAGTAACGACAATCCACAGTC 57.037 37.500 0.00 0.00 0.00 3.51
26 27 9.754382 AGGCTTTCGTCTCGTTTTATATATAAA 57.246 29.630 12.90 12.90 0.00 1.40
27 28 9.754382 AAGGCTTTCGTCTCGTTTTATATATAA 57.246 29.630 0.81 0.81 0.00 0.98
28 29 9.754382 AAAGGCTTTCGTCTCGTTTTATATATA 57.246 29.630 6.68 0.00 0.00 0.86
29 30 8.658499 AAAGGCTTTCGTCTCGTTTTATATAT 57.342 30.769 6.68 0.00 0.00 0.86
30 31 8.483307 AAAAGGCTTTCGTCTCGTTTTATATA 57.517 30.769 13.76 0.00 0.00 0.86
31 32 6.980051 AAAGGCTTTCGTCTCGTTTTATAT 57.020 33.333 6.68 0.00 0.00 0.86
32 33 6.790285 AAAAGGCTTTCGTCTCGTTTTATA 57.210 33.333 13.76 0.00 0.00 0.98
33 34 5.684550 AAAAGGCTTTCGTCTCGTTTTAT 57.315 34.783 13.76 0.00 0.00 1.40
34 35 5.064962 TGAAAAAGGCTTTCGTCTCGTTTTA 59.935 36.000 13.76 0.00 30.65 1.52
35 36 4.142556 TGAAAAAGGCTTTCGTCTCGTTTT 60.143 37.500 13.76 0.00 31.67 2.43
36 37 3.375922 TGAAAAAGGCTTTCGTCTCGTTT 59.624 39.130 13.76 0.72 0.00 3.60
37 38 2.940410 TGAAAAAGGCTTTCGTCTCGTT 59.060 40.909 13.76 1.51 0.00 3.85
38 39 2.557317 TGAAAAAGGCTTTCGTCTCGT 58.443 42.857 13.76 0.00 0.00 4.18
39 40 3.242608 TGTTGAAAAAGGCTTTCGTCTCG 60.243 43.478 13.76 0.00 0.00 4.04
40 41 4.287238 TGTTGAAAAAGGCTTTCGTCTC 57.713 40.909 13.76 8.39 0.00 3.36
41 42 4.712122 TTGTTGAAAAAGGCTTTCGTCT 57.288 36.364 13.76 0.00 0.00 4.18
42 43 5.040635 TCATTGTTGAAAAAGGCTTTCGTC 58.959 37.500 13.76 13.81 0.00 4.20
43 44 5.004922 TCATTGTTGAAAAAGGCTTTCGT 57.995 34.783 13.76 4.30 0.00 3.85
44 45 7.201461 CCATATCATTGTTGAAAAAGGCTTTCG 60.201 37.037 13.76 0.00 34.96 3.46
45 46 7.818930 TCCATATCATTGTTGAAAAAGGCTTTC 59.181 33.333 13.76 2.15 34.96 2.62
46 47 7.678837 TCCATATCATTGTTGAAAAAGGCTTT 58.321 30.769 6.68 6.68 34.96 3.51
47 48 7.178983 TCTCCATATCATTGTTGAAAAAGGCTT 59.821 33.333 0.00 0.00 34.96 4.35
48 49 6.664816 TCTCCATATCATTGTTGAAAAAGGCT 59.335 34.615 0.00 0.00 34.96 4.58
49 50 6.866480 TCTCCATATCATTGTTGAAAAAGGC 58.134 36.000 0.00 0.00 34.96 4.35
67 68 8.857098 TGCTTTAGACGTACTATTTATCTCCAT 58.143 33.333 0.00 0.00 0.00 3.41
68 69 8.229253 TGCTTTAGACGTACTATTTATCTCCA 57.771 34.615 0.00 0.00 0.00 3.86
69 70 9.182933 CTTGCTTTAGACGTACTATTTATCTCC 57.817 37.037 0.00 0.00 0.00 3.71
70 71 9.182933 CCTTGCTTTAGACGTACTATTTATCTC 57.817 37.037 0.00 0.00 0.00 2.75
71 72 8.693625 ACCTTGCTTTAGACGTACTATTTATCT 58.306 33.333 0.00 0.00 0.00 1.98
72 73 8.868635 ACCTTGCTTTAGACGTACTATTTATC 57.131 34.615 0.00 0.00 0.00 1.75
74 75 9.793252 CTTACCTTGCTTTAGACGTACTATTTA 57.207 33.333 0.00 0.00 0.00 1.40
75 76 7.277319 GCTTACCTTGCTTTAGACGTACTATTT 59.723 37.037 0.00 0.00 0.00 1.40
76 77 6.755607 GCTTACCTTGCTTTAGACGTACTATT 59.244 38.462 0.00 0.00 0.00 1.73
77 78 6.127535 TGCTTACCTTGCTTTAGACGTACTAT 60.128 38.462 0.00 0.00 0.00 2.12
78 79 5.183713 TGCTTACCTTGCTTTAGACGTACTA 59.816 40.000 0.00 0.00 0.00 1.82
79 80 4.021719 TGCTTACCTTGCTTTAGACGTACT 60.022 41.667 0.00 0.00 0.00 2.73
80 81 4.091075 GTGCTTACCTTGCTTTAGACGTAC 59.909 45.833 0.00 0.00 0.00 3.67
81 82 4.021719 AGTGCTTACCTTGCTTTAGACGTA 60.022 41.667 0.00 0.00 0.00 3.57
82 83 3.064931 GTGCTTACCTTGCTTTAGACGT 58.935 45.455 0.00 0.00 0.00 4.34
83 84 3.326747 AGTGCTTACCTTGCTTTAGACG 58.673 45.455 0.00 0.00 0.00 4.18
84 85 5.163844 GCTTAGTGCTTACCTTGCTTTAGAC 60.164 44.000 0.00 0.00 38.95 2.59
85 86 4.935808 GCTTAGTGCTTACCTTGCTTTAGA 59.064 41.667 0.00 0.00 38.95 2.10
86 87 4.695455 TGCTTAGTGCTTACCTTGCTTTAG 59.305 41.667 0.00 0.00 43.37 1.85
87 88 4.647611 TGCTTAGTGCTTACCTTGCTTTA 58.352 39.130 0.00 0.00 43.37 1.85
88 89 3.486383 TGCTTAGTGCTTACCTTGCTTT 58.514 40.909 0.00 0.00 43.37 3.51
89 90 3.077359 CTGCTTAGTGCTTACCTTGCTT 58.923 45.455 0.00 0.00 43.37 3.91
90 91 2.704572 CTGCTTAGTGCTTACCTTGCT 58.295 47.619 0.00 0.00 43.37 3.91
91 92 1.131315 GCTGCTTAGTGCTTACCTTGC 59.869 52.381 0.00 0.00 43.37 4.01
92 93 2.704572 AGCTGCTTAGTGCTTACCTTG 58.295 47.619 0.00 0.00 43.37 3.61
93 94 3.515901 AGTAGCTGCTTAGTGCTTACCTT 59.484 43.478 7.79 0.00 43.37 3.50
94 95 3.100671 AGTAGCTGCTTAGTGCTTACCT 58.899 45.455 7.79 0.73 43.37 3.08
95 96 3.528597 AGTAGCTGCTTAGTGCTTACC 57.471 47.619 7.79 0.00 43.37 2.85
96 97 4.985409 CCATAGTAGCTGCTTAGTGCTTAC 59.015 45.833 10.41 0.00 43.37 2.34
97 98 4.501571 GCCATAGTAGCTGCTTAGTGCTTA 60.502 45.833 10.41 0.00 43.37 3.09
98 99 3.742640 GCCATAGTAGCTGCTTAGTGCTT 60.743 47.826 10.41 0.00 43.37 3.91
99 100 2.224161 GCCATAGTAGCTGCTTAGTGCT 60.224 50.000 10.41 7.00 43.37 4.40
100 101 2.139118 GCCATAGTAGCTGCTTAGTGC 58.861 52.381 10.41 4.66 43.25 4.40
101 102 2.366916 AGGCCATAGTAGCTGCTTAGTG 59.633 50.000 10.41 7.07 0.00 2.74
102 103 2.366916 CAGGCCATAGTAGCTGCTTAGT 59.633 50.000 10.41 0.00 0.00 2.24
103 104 2.869636 GCAGGCCATAGTAGCTGCTTAG 60.870 54.545 10.41 2.83 34.02 2.18
122 123 1.266718 GACCTTTGAAGAACGCATGCA 59.733 47.619 19.57 0.00 0.00 3.96
126 127 3.015516 GGGACCTTTGAAGAACGCA 57.984 52.632 0.00 0.00 0.00 5.24
143 144 0.531090 TCACGTTCTTTGGTGTCGGG 60.531 55.000 0.00 0.00 35.67 5.14
144 145 1.260561 CTTCACGTTCTTTGGTGTCGG 59.739 52.381 0.00 0.00 35.67 4.79
159 160 2.985847 GGCAGCCCACACCTTCAC 60.986 66.667 0.00 0.00 0.00 3.18
188 189 2.172851 TTTATGTGGTTCGTTCCGCT 57.827 45.000 11.76 3.17 38.63 5.52
200 201 9.367444 GAAACGGAGGGAGTATATATTTATGTG 57.633 37.037 0.00 0.00 0.00 3.21
214 215 7.442656 ACACATATATTTAGAAACGGAGGGAG 58.557 38.462 0.00 0.00 0.00 4.30
215 216 7.369551 ACACATATATTTAGAAACGGAGGGA 57.630 36.000 0.00 0.00 0.00 4.20
216 217 8.446599 AAACACATATATTTAGAAACGGAGGG 57.553 34.615 0.00 0.00 0.00 4.30
341 342 9.321562 CCGTGCCTAAATATAAGTTTTCTTAGA 57.678 33.333 0.00 0.00 44.27 2.10
342 343 9.321562 TCCGTGCCTAAATATAAGTTTTCTTAG 57.678 33.333 0.00 0.00 44.27 2.18
343 344 9.321562 CTCCGTGCCTAAATATAAGTTTTCTTA 57.678 33.333 0.00 0.00 45.00 2.10
344 345 7.282450 CCTCCGTGCCTAAATATAAGTTTTCTT 59.718 37.037 0.00 0.00 43.24 2.52
345 346 6.766467 CCTCCGTGCCTAAATATAAGTTTTCT 59.234 38.462 0.00 0.00 0.00 2.52
346 347 6.764560 TCCTCCGTGCCTAAATATAAGTTTTC 59.235 38.462 0.00 0.00 0.00 2.29
347 348 6.655930 TCCTCCGTGCCTAAATATAAGTTTT 58.344 36.000 0.00 0.00 0.00 2.43
348 349 6.243216 TCCTCCGTGCCTAAATATAAGTTT 57.757 37.500 0.00 0.00 0.00 2.66
349 350 5.881923 TCCTCCGTGCCTAAATATAAGTT 57.118 39.130 0.00 0.00 0.00 2.66
350 351 5.365895 ACTTCCTCCGTGCCTAAATATAAGT 59.634 40.000 0.00 0.00 0.00 2.24
351 352 5.855045 ACTTCCTCCGTGCCTAAATATAAG 58.145 41.667 0.00 0.00 0.00 1.73
352 353 5.881923 ACTTCCTCCGTGCCTAAATATAA 57.118 39.130 0.00 0.00 0.00 0.98
353 354 6.982160 TTACTTCCTCCGTGCCTAAATATA 57.018 37.500 0.00 0.00 0.00 0.86
354 355 5.881923 TTACTTCCTCCGTGCCTAAATAT 57.118 39.130 0.00 0.00 0.00 1.28
355 356 5.680594 TTTACTTCCTCCGTGCCTAAATA 57.319 39.130 0.00 0.00 0.00 1.40
356 357 4.563140 TTTACTTCCTCCGTGCCTAAAT 57.437 40.909 0.00 0.00 0.00 1.40
357 358 4.354893 TTTTACTTCCTCCGTGCCTAAA 57.645 40.909 0.00 0.00 0.00 1.85
358 359 4.354893 TTTTTACTTCCTCCGTGCCTAA 57.645 40.909 0.00 0.00 0.00 2.69
359 360 4.563140 ATTTTTACTTCCTCCGTGCCTA 57.437 40.909 0.00 0.00 0.00 3.93
360 361 2.943036 TTTTTACTTCCTCCGTGCCT 57.057 45.000 0.00 0.00 0.00 4.75
361 362 3.425758 CGAATTTTTACTTCCTCCGTGCC 60.426 47.826 0.00 0.00 0.00 5.01
362 363 3.434299 TCGAATTTTTACTTCCTCCGTGC 59.566 43.478 0.00 0.00 0.00 5.34
363 364 4.927425 TCTCGAATTTTTACTTCCTCCGTG 59.073 41.667 0.00 0.00 0.00 4.94
364 365 5.047519 TCTCTCGAATTTTTACTTCCTCCGT 60.048 40.000 0.00 0.00 0.00 4.69
365 366 5.408356 TCTCTCGAATTTTTACTTCCTCCG 58.592 41.667 0.00 0.00 0.00 4.63
366 367 7.668525 TTTCTCTCGAATTTTTACTTCCTCC 57.331 36.000 0.00 0.00 0.00 4.30
368 369 9.899226 CATTTTTCTCTCGAATTTTTACTTCCT 57.101 29.630 0.00 0.00 0.00 3.36
369 370 9.129209 CCATTTTTCTCTCGAATTTTTACTTCC 57.871 33.333 0.00 0.00 0.00 3.46
370 371 9.893305 TCCATTTTTCTCTCGAATTTTTACTTC 57.107 29.630 0.00 0.00 0.00 3.01
372 373 9.846248 CATCCATTTTTCTCTCGAATTTTTACT 57.154 29.630 0.00 0.00 0.00 2.24
373 374 8.587111 GCATCCATTTTTCTCTCGAATTTTTAC 58.413 33.333 0.00 0.00 0.00 2.01
374 375 7.484641 CGCATCCATTTTTCTCTCGAATTTTTA 59.515 33.333 0.00 0.00 0.00 1.52
375 376 6.308766 CGCATCCATTTTTCTCTCGAATTTTT 59.691 34.615 0.00 0.00 0.00 1.94
376 377 5.801947 CGCATCCATTTTTCTCTCGAATTTT 59.198 36.000 0.00 0.00 0.00 1.82
377 378 5.106157 ACGCATCCATTTTTCTCTCGAATTT 60.106 36.000 0.00 0.00 0.00 1.82
378 379 4.396166 ACGCATCCATTTTTCTCTCGAATT 59.604 37.500 0.00 0.00 0.00 2.17
379 380 3.941483 ACGCATCCATTTTTCTCTCGAAT 59.059 39.130 0.00 0.00 0.00 3.34
380 381 3.334691 ACGCATCCATTTTTCTCTCGAA 58.665 40.909 0.00 0.00 0.00 3.71
381 382 2.972625 ACGCATCCATTTTTCTCTCGA 58.027 42.857 0.00 0.00 0.00 4.04
382 383 4.112634 TCTACGCATCCATTTTTCTCTCG 58.887 43.478 0.00 0.00 0.00 4.04
383 384 6.128282 TGTTTCTACGCATCCATTTTTCTCTC 60.128 38.462 0.00 0.00 0.00 3.20
384 385 5.705441 TGTTTCTACGCATCCATTTTTCTCT 59.295 36.000 0.00 0.00 0.00 3.10
385 386 5.938322 TGTTTCTACGCATCCATTTTTCTC 58.062 37.500 0.00 0.00 0.00 2.87
386 387 5.957842 TGTTTCTACGCATCCATTTTTCT 57.042 34.783 0.00 0.00 0.00 2.52
387 388 7.328249 TCAAATGTTTCTACGCATCCATTTTTC 59.672 33.333 0.00 0.00 32.00 2.29
388 389 7.151308 TCAAATGTTTCTACGCATCCATTTTT 58.849 30.769 0.00 0.00 32.00 1.94
389 390 6.686630 TCAAATGTTTCTACGCATCCATTTT 58.313 32.000 0.00 0.00 32.00 1.82
390 391 6.266168 TCAAATGTTTCTACGCATCCATTT 57.734 33.333 0.00 0.00 33.97 2.32
391 392 5.895636 TCAAATGTTTCTACGCATCCATT 57.104 34.783 0.00 0.00 0.00 3.16
392 393 7.255242 CCTTATCAAATGTTTCTACGCATCCAT 60.255 37.037 0.00 0.00 0.00 3.41
393 394 6.038161 CCTTATCAAATGTTTCTACGCATCCA 59.962 38.462 0.00 0.00 0.00 3.41
394 395 6.038271 ACCTTATCAAATGTTTCTACGCATCC 59.962 38.462 0.00 0.00 0.00 3.51
395 396 7.016361 ACCTTATCAAATGTTTCTACGCATC 57.984 36.000 0.00 0.00 0.00 3.91
396 397 7.391148 AACCTTATCAAATGTTTCTACGCAT 57.609 32.000 0.00 0.00 0.00 4.73
397 398 6.811253 AACCTTATCAAATGTTTCTACGCA 57.189 33.333 0.00 0.00 0.00 5.24
398 399 7.302524 TCAAACCTTATCAAATGTTTCTACGC 58.697 34.615 0.00 0.00 32.99 4.42
399 400 9.672086 TTTCAAACCTTATCAAATGTTTCTACG 57.328 29.630 0.00 0.00 32.99 3.51
404 405 8.829612 CAGCTTTTCAAACCTTATCAAATGTTT 58.170 29.630 0.00 0.00 34.84 2.83
472 476 5.999205 TGGTTTGTCCATTATTCTTGCAT 57.001 34.783 0.00 0.00 41.93 3.96
486 490 7.865889 CCCAGTTAAGAAATAGTTTGGTTTGTC 59.134 37.037 0.00 0.00 0.00 3.18
491 495 9.596308 AAATACCCAGTTAAGAAATAGTTTGGT 57.404 29.630 0.00 0.00 0.00 3.67
531 535 3.495331 ACATGGAGTGGTTGCAATTGTA 58.505 40.909 0.59 0.00 0.00 2.41
551 555 6.683974 ATTGCAACTAGTCAACATGGATAC 57.316 37.500 0.00 0.00 0.00 2.24
553 557 5.477984 ACAATTGCAACTAGTCAACATGGAT 59.522 36.000 0.00 0.00 0.00 3.41
554 558 4.826733 ACAATTGCAACTAGTCAACATGGA 59.173 37.500 0.00 0.00 0.00 3.41
555 559 5.125100 ACAATTGCAACTAGTCAACATGG 57.875 39.130 0.00 0.00 0.00 3.66
556 560 8.239314 AGATTACAATTGCAACTAGTCAACATG 58.761 33.333 0.00 3.52 0.00 3.21
558 562 7.308529 CCAGATTACAATTGCAACTAGTCAACA 60.309 37.037 0.00 0.00 0.00 3.33
559 563 7.023575 CCAGATTACAATTGCAACTAGTCAAC 58.976 38.462 0.00 0.00 0.00 3.18
561 565 5.123820 GCCAGATTACAATTGCAACTAGTCA 59.876 40.000 0.00 0.00 0.00 3.41
563 567 5.256474 AGCCAGATTACAATTGCAACTAGT 58.744 37.500 0.00 3.17 0.00 2.57
564 568 5.824904 AGCCAGATTACAATTGCAACTAG 57.175 39.130 0.00 0.00 0.00 2.57
565 569 6.884295 ACTAAGCCAGATTACAATTGCAACTA 59.116 34.615 0.00 0.00 0.00 2.24
567 571 5.954335 ACTAAGCCAGATTACAATTGCAAC 58.046 37.500 0.00 0.00 0.00 4.17
569 573 5.252547 TGACTAAGCCAGATTACAATTGCA 58.747 37.500 5.05 0.00 0.00 4.08
571 575 7.325660 ACATGACTAAGCCAGATTACAATTG 57.674 36.000 3.24 3.24 0.00 2.32
572 576 7.944729 AACATGACTAAGCCAGATTACAATT 57.055 32.000 0.00 0.00 0.00 2.32
573 577 7.611467 TCAAACATGACTAAGCCAGATTACAAT 59.389 33.333 0.00 0.00 0.00 2.71
576 580 6.985188 TCAAACATGACTAAGCCAGATTAC 57.015 37.500 0.00 0.00 0.00 1.89
578 582 6.006449 AGTTCAAACATGACTAAGCCAGATT 58.994 36.000 0.00 0.00 0.00 2.40
580 584 4.973168 AGTTCAAACATGACTAAGCCAGA 58.027 39.130 0.00 0.00 0.00 3.86
581 585 4.143030 CGAGTTCAAACATGACTAAGCCAG 60.143 45.833 0.00 0.00 0.00 4.85
582 586 3.745975 CGAGTTCAAACATGACTAAGCCA 59.254 43.478 0.00 0.00 0.00 4.75
583 587 3.994392 TCGAGTTCAAACATGACTAAGCC 59.006 43.478 0.00 0.00 0.00 4.35
584 588 4.923871 TCTCGAGTTCAAACATGACTAAGC 59.076 41.667 13.13 0.00 0.00 3.09
585 589 7.169982 AGTTTCTCGAGTTCAAACATGACTAAG 59.830 37.037 22.73 0.00 33.26 2.18
589 593 5.234329 TCAGTTTCTCGAGTTCAAACATGAC 59.766 40.000 22.73 4.29 33.26 3.06
590 594 5.234329 GTCAGTTTCTCGAGTTCAAACATGA 59.766 40.000 22.73 19.47 33.26 3.07
591 595 5.435557 GTCAGTTTCTCGAGTTCAAACATG 58.564 41.667 22.73 18.17 33.26 3.21
592 596 4.209288 CGTCAGTTTCTCGAGTTCAAACAT 59.791 41.667 22.73 10.61 33.26 2.71
593 597 3.550275 CGTCAGTTTCTCGAGTTCAAACA 59.450 43.478 22.73 7.31 33.26 2.83
594 598 3.601812 GCGTCAGTTTCTCGAGTTCAAAC 60.602 47.826 13.13 15.16 0.00 2.93
595 599 2.538449 GCGTCAGTTTCTCGAGTTCAAA 59.462 45.455 13.13 2.83 0.00 2.69
596 600 2.124903 GCGTCAGTTTCTCGAGTTCAA 58.875 47.619 13.13 1.33 0.00 2.69
598 602 1.061485 GGCGTCAGTTTCTCGAGTTC 58.939 55.000 13.13 4.37 0.00 3.01
601 605 1.009389 GGTGGCGTCAGTTTCTCGAG 61.009 60.000 5.93 5.93 0.00 4.04
602 606 1.006571 GGTGGCGTCAGTTTCTCGA 60.007 57.895 0.00 0.00 0.00 4.04
603 607 0.600255 AAGGTGGCGTCAGTTTCTCG 60.600 55.000 0.00 0.00 0.00 4.04
604 608 2.450609 TAAGGTGGCGTCAGTTTCTC 57.549 50.000 0.00 0.00 0.00 2.87
605 609 2.922740 TTAAGGTGGCGTCAGTTTCT 57.077 45.000 0.00 0.00 0.00 2.52
606 610 2.418976 GGATTAAGGTGGCGTCAGTTTC 59.581 50.000 0.00 0.00 0.00 2.78
607 611 2.039879 AGGATTAAGGTGGCGTCAGTTT 59.960 45.455 0.00 0.00 0.00 2.66
608 612 1.628846 AGGATTAAGGTGGCGTCAGTT 59.371 47.619 0.00 0.00 0.00 3.16
609 613 1.276622 AGGATTAAGGTGGCGTCAGT 58.723 50.000 0.00 0.00 0.00 3.41
610 614 2.403252 AAGGATTAAGGTGGCGTCAG 57.597 50.000 0.00 0.00 0.00 3.51
611 615 2.817258 CAAAAGGATTAAGGTGGCGTCA 59.183 45.455 0.00 0.00 0.00 4.35
612 616 2.817844 ACAAAAGGATTAAGGTGGCGTC 59.182 45.455 0.00 0.00 0.00 5.19
613 617 2.871453 ACAAAAGGATTAAGGTGGCGT 58.129 42.857 0.00 0.00 0.00 5.68
615 619 5.652452 AGACATACAAAAGGATTAAGGTGGC 59.348 40.000 0.00 0.00 0.00 5.01
616 620 8.980481 ATAGACATACAAAAGGATTAAGGTGG 57.020 34.615 0.00 0.00 0.00 4.61
624 628 8.739972 GGTCAACAAATAGACATACAAAAGGAT 58.260 33.333 0.00 0.00 36.50 3.24
626 630 7.881142 TGGTCAACAAATAGACATACAAAAGG 58.119 34.615 0.00 0.00 36.50 3.11
627 631 8.567948 ACTGGTCAACAAATAGACATACAAAAG 58.432 33.333 0.00 0.00 36.50 2.27
647 953 3.973657 TCTAGTCGTGTTTGAACTGGTC 58.026 45.455 0.00 0.00 0.00 4.02
668 974 9.398170 CAAACTGTTTGAGATTCGTTCATAAAT 57.602 29.630 25.06 0.00 43.26 1.40
674 980 4.597079 TGCAAACTGTTTGAGATTCGTTC 58.403 39.130 31.35 13.99 43.26 3.95
676 982 4.601019 CTTGCAAACTGTTTGAGATTCGT 58.399 39.130 31.35 0.00 43.26 3.85
677 983 3.423206 GCTTGCAAACTGTTTGAGATTCG 59.577 43.478 31.35 15.62 43.26 3.34
678 984 4.614946 AGCTTGCAAACTGTTTGAGATTC 58.385 39.130 31.35 16.44 43.26 2.52
685 991 1.476488 ACGGAAGCTTGCAAACTGTTT 59.524 42.857 18.65 0.00 0.00 2.83
686 992 1.065551 GACGGAAGCTTGCAAACTGTT 59.934 47.619 18.65 0.00 0.00 3.16
687 993 0.663153 GACGGAAGCTTGCAAACTGT 59.337 50.000 18.65 7.51 0.00 3.55
690 996 0.863144 TACGACGGAAGCTTGCAAAC 59.137 50.000 18.65 7.29 0.00 2.93
694 1000 1.546834 CTACTACGACGGAAGCTTGC 58.453 55.000 2.10 5.53 0.00 4.01
696 1002 2.119801 TCCTACTACGACGGAAGCTT 57.880 50.000 0.00 0.00 0.00 3.74
890 1209 0.032017 TTGTAGGGAGGGAGAGGAGC 60.032 60.000 0.00 0.00 0.00 4.70
1053 1378 3.678289 CATCATCAGAACACCAGGAACA 58.322 45.455 0.00 0.00 0.00 3.18
1070 1395 2.030412 ACAGACAACGCCGCATCA 59.970 55.556 0.00 0.00 0.00 3.07
1220 1545 2.565841 GGTAAATAGACAGGCAGGCAG 58.434 52.381 0.00 0.00 0.00 4.85
1221 1546 1.211949 GGGTAAATAGACAGGCAGGCA 59.788 52.381 0.00 0.00 0.00 4.75
1222 1547 1.490910 AGGGTAAATAGACAGGCAGGC 59.509 52.381 0.00 0.00 0.00 4.85
1275 1600 3.270877 GCACGGAACTAATCTGAACCAT 58.729 45.455 0.00 0.00 37.88 3.55
1278 1603 3.585862 TCTGCACGGAACTAATCTGAAC 58.414 45.455 0.00 0.00 37.88 3.18
1293 1618 7.031226 ACAACCAATATATTGACATCTGCAC 57.969 36.000 24.17 0.00 40.14 4.57
1382 1722 3.184628 CCCAGATAGGATAGGCCAATGA 58.815 50.000 5.01 0.00 41.22 2.57
1385 1725 1.225694 ACCCCAGATAGGATAGGCCAA 59.774 52.381 5.01 0.00 41.22 4.52
1407 1747 5.071250 TCCTACAAGCAAACTACAAAGGAGA 59.929 40.000 0.00 0.00 0.00 3.71
1408 1748 5.179555 GTCCTACAAGCAAACTACAAAGGAG 59.820 44.000 0.00 0.00 0.00 3.69
1442 1782 1.818642 AGCAGCATCAGAACCAGAAC 58.181 50.000 0.00 0.00 0.00 3.01
1448 1788 5.390991 GGTTACAAAGTAGCAGCATCAGAAC 60.391 44.000 0.00 0.00 0.00 3.01
1450 1790 4.253685 GGTTACAAAGTAGCAGCATCAGA 58.746 43.478 0.00 0.00 0.00 3.27
1464 1804 2.948979 CCAAGACAGCAGTGGTTACAAA 59.051 45.455 0.00 0.00 0.00 2.83
1465 1805 2.092646 ACCAAGACAGCAGTGGTTACAA 60.093 45.455 0.00 0.00 43.19 2.41
1477 1934 1.800586 CGATTGACCACACCAAGACAG 59.199 52.381 0.00 0.00 0.00 3.51
1483 1940 2.217750 CAGAAACGATTGACCACACCA 58.782 47.619 0.00 0.00 0.00 4.17
1486 1943 2.143122 GAGCAGAAACGATTGACCACA 58.857 47.619 0.00 0.00 0.00 4.17
1513 1970 9.877178 ACTGATTAAAGTCAATCTACAACTAGG 57.123 33.333 0.00 0.00 36.16 3.02
1530 1987 4.062293 CCACTCGGACAACACTGATTAAA 58.938 43.478 0.00 0.00 0.00 1.52
1546 2003 0.806868 TAACTACTCGGTGCCACTCG 59.193 55.000 0.00 0.00 0.00 4.18
1547 2004 3.308438 TTTAACTACTCGGTGCCACTC 57.692 47.619 0.00 0.00 0.00 3.51
1569 2026 1.027357 CGGGAATGCAGGGAAATCAG 58.973 55.000 0.00 0.00 0.00 2.90
1577 2034 1.153289 CAGAGACCGGGAATGCAGG 60.153 63.158 6.32 0.00 0.00 4.85
1626 2084 4.083324 ACAACAGGAATGCAGTTAACATCG 60.083 41.667 8.61 0.00 0.00 3.84
1642 2100 6.324819 CAGCACCTATCAAATTAACAACAGG 58.675 40.000 0.00 0.00 0.00 4.00
1643 2101 6.150976 TCCAGCACCTATCAAATTAACAACAG 59.849 38.462 0.00 0.00 0.00 3.16
1789 2265 4.175599 CAGTGTACCTCGCTGCAG 57.824 61.111 10.11 10.11 45.63 4.41
1841 2317 2.670479 CTGATAGTCACATAGCAGGCG 58.330 52.381 0.00 0.00 35.91 5.52
2118 3003 6.516718 TCTCAAACAGTTCCTATATAGCTGC 58.483 40.000 12.99 0.00 0.00 5.25
2125 3010 7.776618 TCTCAACTCTCAAACAGTTCCTATA 57.223 36.000 0.00 0.00 31.40 1.31
2141 3026 3.859411 ATCAGTCTCGGTTCTCAACTC 57.141 47.619 0.00 0.00 0.00 3.01
2145 3030 5.419155 AGACAAATATCAGTCTCGGTTCTCA 59.581 40.000 4.62 0.00 40.96 3.27
2155 3040 7.484975 ACTACTGCTACAGACAAATATCAGTC 58.515 38.462 0.78 0.47 35.48 3.51
2158 3043 7.014326 CCCTACTACTGCTACAGACAAATATCA 59.986 40.741 0.78 0.00 35.18 2.15
2167 3052 1.569548 AGCCCCTACTACTGCTACAGA 59.430 52.381 0.78 0.00 35.18 3.41
2174 3059 6.859112 AATGATATGTAGCCCCTACTACTG 57.141 41.667 4.27 0.00 42.53 2.74
2610 3537 1.064357 CATTGTGCGCACTCATATGCA 59.936 47.619 37.59 15.34 46.47 3.96
2612 3539 1.672363 ACCATTGTGCGCACTCATATG 59.328 47.619 37.59 29.95 0.00 1.78
2617 3544 1.654220 ACAACCATTGTGCGCACTC 59.346 52.632 37.59 16.60 43.48 3.51
2696 3623 0.891373 AGATGCCGGTAGATGGATCG 59.109 55.000 1.90 0.00 0.00 3.69
2962 3889 4.025480 CAGGCAAAACTGACAAAGCATTTC 60.025 41.667 0.00 0.00 40.97 2.17
3057 3985 9.935241 ATAAGCCAGACATATACTCTATTGTTG 57.065 33.333 0.00 0.00 0.00 3.33
3075 4003 1.945394 GCAGGTCATCACATAAGCCAG 59.055 52.381 0.00 0.00 0.00 4.85
3146 4074 1.347221 GTAGGGCGCACGAAATTCG 59.653 57.895 14.35 14.35 46.93 3.34
3153 4081 3.254654 CATCACGTAGGGCGCACG 61.255 66.667 16.11 16.11 46.11 5.34
3166 4095 6.065976 ACTTGGAAGATACAATGGTCATCA 57.934 37.500 0.00 0.00 0.00 3.07
3184 4113 1.986882 AGGAAGAGGTTGCAACTTGG 58.013 50.000 27.64 0.00 0.00 3.61
3193 4122 9.997172 AAATGGAGAAAATATAAGGAAGAGGTT 57.003 29.630 0.00 0.00 0.00 3.50
3209 4228 2.083774 CCAGCTGCGTAAATGGAGAAA 58.916 47.619 8.66 0.00 34.60 2.52
3212 4231 1.667724 CTTCCAGCTGCGTAAATGGAG 59.332 52.381 8.66 0.00 42.54 3.86
3233 4252 8.721478 TCAGAAAAGAGTAACAGTAATGAATGC 58.279 33.333 0.00 0.00 0.00 3.56
3248 4500 8.787852 GTTGGTTTCATATCTTCAGAAAAGAGT 58.212 33.333 0.00 0.00 33.54 3.24
3253 4505 8.602424 TCTAGGTTGGTTTCATATCTTCAGAAA 58.398 33.333 0.00 0.00 0.00 2.52
3262 4514 9.975218 ATTTACAGTTCTAGGTTGGTTTCATAT 57.025 29.630 0.00 0.00 0.00 1.78
3274 4526 9.667107 TGTGGAGAAAATATTTACAGTTCTAGG 57.333 33.333 0.01 0.00 0.00 3.02
3276 4528 9.146984 CGTGTGGAGAAAATATTTACAGTTCTA 57.853 33.333 0.01 0.00 0.00 2.10
3277 4529 7.876068 TCGTGTGGAGAAAATATTTACAGTTCT 59.124 33.333 0.01 0.01 0.00 3.01
3278 4530 8.025243 TCGTGTGGAGAAAATATTTACAGTTC 57.975 34.615 0.01 0.00 0.00 3.01
3279 4531 7.972832 TCGTGTGGAGAAAATATTTACAGTT 57.027 32.000 0.01 0.00 0.00 3.16
3280 4532 7.414098 GCATCGTGTGGAGAAAATATTTACAGT 60.414 37.037 0.01 0.00 0.00 3.55
3281 4533 6.907212 GCATCGTGTGGAGAAAATATTTACAG 59.093 38.462 0.01 0.00 0.00 2.74
3282 4534 6.183360 GGCATCGTGTGGAGAAAATATTTACA 60.183 38.462 0.01 0.00 0.00 2.41
3283 4535 6.199393 GGCATCGTGTGGAGAAAATATTTAC 58.801 40.000 0.01 0.00 0.00 2.01
3284 4536 5.007234 CGGCATCGTGTGGAGAAAATATTTA 59.993 40.000 0.01 0.00 0.00 1.40
3285 4537 4.201910 CGGCATCGTGTGGAGAAAATATTT 60.202 41.667 0.00 0.00 0.00 1.40
3286 4538 3.312421 CGGCATCGTGTGGAGAAAATATT 59.688 43.478 0.00 0.00 0.00 1.28
3287 4539 2.872245 CGGCATCGTGTGGAGAAAATAT 59.128 45.455 0.00 0.00 0.00 1.28
3288 4540 2.276201 CGGCATCGTGTGGAGAAAATA 58.724 47.619 0.00 0.00 0.00 1.40
3289 4541 1.086696 CGGCATCGTGTGGAGAAAAT 58.913 50.000 0.00 0.00 0.00 1.82
3290 4542 1.573829 GCGGCATCGTGTGGAGAAAA 61.574 55.000 0.00 0.00 38.89 2.29
3291 4543 2.032634 GCGGCATCGTGTGGAGAAA 61.033 57.895 0.00 0.00 38.89 2.52
3292 4544 2.434185 GCGGCATCGTGTGGAGAA 60.434 61.111 0.00 0.00 38.89 2.87
3293 4545 1.671901 TATGCGGCATCGTGTGGAGA 61.672 55.000 20.34 0.00 38.89 3.71
3294 4546 0.601046 ATATGCGGCATCGTGTGGAG 60.601 55.000 20.34 0.00 38.89 3.86
3295 4547 0.879839 CATATGCGGCATCGTGTGGA 60.880 55.000 20.34 0.00 38.89 4.02
3296 4548 1.159713 ACATATGCGGCATCGTGTGG 61.160 55.000 24.30 11.46 38.89 4.17
3297 4549 1.496934 TACATATGCGGCATCGTGTG 58.503 50.000 29.13 21.38 38.89 3.82
3298 4550 2.232756 TTACATATGCGGCATCGTGT 57.767 45.000 26.48 26.48 38.89 4.49
3299 4551 3.811722 ATTTACATATGCGGCATCGTG 57.188 42.857 20.34 20.28 38.89 4.35
3300 4552 6.494893 AAATATTTACATATGCGGCATCGT 57.505 33.333 20.34 19.13 38.89 3.73
3301 4553 7.243487 AGAAAATATTTACATATGCGGCATCG 58.757 34.615 20.34 14.25 39.81 3.84
3302 4554 9.490663 GTAGAAAATATTTACATATGCGGCATC 57.509 33.333 20.34 0.21 0.00 3.91
3303 4555 9.008965 TGTAGAAAATATTTACATATGCGGCAT 57.991 29.630 20.57 20.57 0.00 4.40
3304 4556 8.286800 GTGTAGAAAATATTTACATATGCGGCA 58.713 33.333 4.58 4.58 30.79 5.69
3305 4557 7.749126 GGTGTAGAAAATATTTACATATGCGGC 59.251 37.037 1.58 0.00 30.79 6.53
3306 4558 8.234546 GGGTGTAGAAAATATTTACATATGCGG 58.765 37.037 1.58 0.00 30.79 5.69
3307 4559 7.955324 CGGGTGTAGAAAATATTTACATATGCG 59.045 37.037 1.58 0.00 30.79 4.73
3308 4560 8.780249 ACGGGTGTAGAAAATATTTACATATGC 58.220 33.333 1.58 0.00 30.79 3.14
3314 4566 9.476761 CGTAAAACGGGTGTAGAAAATATTTAC 57.523 33.333 0.01 0.00 38.08 2.01
3345 4597 1.670791 TTCGGCAGAAACCTTCGTTT 58.329 45.000 0.00 0.00 44.99 3.60
3346 4598 1.670791 TTTCGGCAGAAACCTTCGTT 58.329 45.000 8.00 0.00 41.06 3.85
3347 4599 1.670791 TTTTCGGCAGAAACCTTCGT 58.329 45.000 11.74 0.00 45.11 3.85
3348 4600 2.989422 ATTTTCGGCAGAAACCTTCG 57.011 45.000 11.74 0.00 45.11 3.79
3349 4601 4.759516 TGTATTTTCGGCAGAAACCTTC 57.240 40.909 11.74 4.26 45.11 3.46
3350 4602 5.722021 AATGTATTTTCGGCAGAAACCTT 57.278 34.783 11.74 3.14 45.11 3.50
3351 4603 5.242838 TGAAATGTATTTTCGGCAGAAACCT 59.757 36.000 11.74 5.33 45.63 3.50
3352 4604 5.344933 GTGAAATGTATTTTCGGCAGAAACC 59.655 40.000 11.74 4.06 45.63 3.27
3353 4605 5.918011 TGTGAAATGTATTTTCGGCAGAAAC 59.082 36.000 11.74 2.35 45.63 2.78
3396 4648 5.572896 GGTGTCATTCCGTCATGAAATTTTC 59.427 40.000 0.00 2.05 34.89 2.29
3397 4649 5.243730 AGGTGTCATTCCGTCATGAAATTTT 59.756 36.000 0.00 0.00 34.89 1.82
3420 4699 9.130312 GTTCAGACTGTATTTTCTACACTACAG 57.870 37.037 1.59 6.95 44.18 2.74
3421 4700 8.857098 AGTTCAGACTGTATTTTCTACACTACA 58.143 33.333 1.59 0.00 33.99 2.74
3445 4724 9.543783 GACCAAAATCTCTACGGAATAATAAGT 57.456 33.333 0.00 0.00 0.00 2.24
3452 4731 7.703058 AAAATGACCAAAATCTCTACGGAAT 57.297 32.000 0.00 0.00 0.00 3.01
3453 4732 7.367285 CAAAAATGACCAAAATCTCTACGGAA 58.633 34.615 0.00 0.00 0.00 4.30
3454 4733 6.569610 GCAAAAATGACCAAAATCTCTACGGA 60.570 38.462 0.00 0.00 0.00 4.69
3455 4734 5.572896 GCAAAAATGACCAAAATCTCTACGG 59.427 40.000 0.00 0.00 0.00 4.02
3456 4735 5.572896 GGCAAAAATGACCAAAATCTCTACG 59.427 40.000 0.00 0.00 0.00 3.51
3459 4738 5.813513 AGGCAAAAATGACCAAAATCTCT 57.186 34.783 0.00 0.00 0.00 3.10
3460 4739 6.924111 TCTAGGCAAAAATGACCAAAATCTC 58.076 36.000 0.00 0.00 0.00 2.75
3461 4740 6.916360 TCTAGGCAAAAATGACCAAAATCT 57.084 33.333 0.00 0.00 0.00 2.40
3468 4792 3.785486 GGCATTCTAGGCAAAAATGACC 58.215 45.455 5.52 3.31 33.20 4.02
3491 4815 3.690460 AGAAATGAGTCAATGACACCCC 58.310 45.455 16.38 2.55 34.60 4.95
3509 4833 5.405571 GCTCTGTATGAAGTTTCACGAAGAA 59.594 40.000 0.00 0.00 40.49 2.52
3510 4834 4.923871 GCTCTGTATGAAGTTTCACGAAGA 59.076 41.667 0.00 0.55 40.49 2.87
3514 4838 4.237724 TCTGCTCTGTATGAAGTTTCACG 58.762 43.478 0.00 0.00 40.49 4.35
3515 4839 6.402983 CCATTCTGCTCTGTATGAAGTTTCAC 60.403 42.308 0.00 0.00 40.49 3.18
3517 4841 5.645497 ACCATTCTGCTCTGTATGAAGTTTC 59.355 40.000 0.00 0.00 0.00 2.78
3564 4904 9.786105 GGCAAAATTCAGAAAAATTGAAAAAGA 57.214 25.926 9.11 0.00 38.01 2.52
3565 4905 9.022915 GGGCAAAATTCAGAAAAATTGAAAAAG 57.977 29.630 9.11 0.00 38.01 2.27
3583 4923 3.006752 TCTGAGAAAAATGCGGGCAAAAT 59.993 39.130 0.00 0.00 0.00 1.82
3677 5088 5.505780 TGATATTGGTTTCGACCCTTGAAT 58.494 37.500 2.25 0.00 0.00 2.57
3748 5159 3.564235 TCACGTATGTATCGGCATACC 57.436 47.619 15.01 0.00 44.93 2.73
3757 5168 5.465051 GCTCATGAGTCATCACGTATGTAT 58.535 41.667 23.38 0.00 38.57 2.29
3760 5171 3.055591 GGCTCATGAGTCATCACGTATG 58.944 50.000 22.39 0.00 38.57 2.39
3761 5172 2.695147 TGGCTCATGAGTCATCACGTAT 59.305 45.455 25.86 0.00 38.26 3.06
3762 5173 2.099405 TGGCTCATGAGTCATCACGTA 58.901 47.619 25.86 1.15 38.26 3.57
3763 5174 0.897621 TGGCTCATGAGTCATCACGT 59.102 50.000 25.86 0.00 38.26 4.49
3764 5175 1.662629 GTTGGCTCATGAGTCATCACG 59.337 52.381 29.51 0.04 43.30 4.35
3765 5176 2.983229 AGTTGGCTCATGAGTCATCAC 58.017 47.619 30.36 25.41 43.30 3.06
3766 5177 3.431346 GCTAGTTGGCTCATGAGTCATCA 60.431 47.826 30.36 17.14 43.30 3.07
3767 5178 3.129871 GCTAGTTGGCTCATGAGTCATC 58.870 50.000 29.51 26.80 43.30 2.92
3768 5179 2.158842 GGCTAGTTGGCTCATGAGTCAT 60.159 50.000 29.51 18.56 43.30 3.06
3769 5180 1.208052 GGCTAGTTGGCTCATGAGTCA 59.792 52.381 25.86 25.86 41.97 3.41
3770 5181 1.208052 TGGCTAGTTGGCTCATGAGTC 59.792 52.381 20.65 20.65 42.34 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.