Multiple sequence alignment - TraesCS3D01G128900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G128900 chr3D 100.000 3656 0 0 582 4237 87932059 87928404 0.000000e+00 6752.0
1 TraesCS3D01G128900 chr3D 100.000 344 0 0 1 344 87932640 87932297 1.660000e-178 636.0
2 TraesCS3D01G128900 chr3A 92.730 2476 117 27 611 3068 104422453 104420023 0.000000e+00 3517.0
3 TraesCS3D01G128900 chr3A 90.155 579 22 16 3087 3635 104420036 104419463 0.000000e+00 721.0
4 TraesCS3D01G128900 chr3A 85.329 334 27 6 3536 3852 104419464 104419136 4.090000e-85 326.0
5 TraesCS3D01G128900 chr3B 91.957 2499 105 36 588 3068 137329204 137326784 0.000000e+00 3413.0
6 TraesCS3D01G128900 chr3B 91.286 700 41 4 3088 3773 137326796 137326103 0.000000e+00 937.0
7 TraesCS3D01G128900 chr3B 85.795 176 16 5 3784 3959 137326012 137325846 1.210000e-40 178.0
8 TraesCS3D01G128900 chr7A 93.827 324 17 2 1 324 467722403 467722723 6.370000e-133 484.0
9 TraesCS3D01G128900 chr6A 89.506 324 21 4 1 324 565714376 565714686 8.540000e-107 398.0
10 TraesCS3D01G128900 chr2D 87.346 324 16 8 1 324 51560761 51560463 8.720000e-92 348.0
11 TraesCS3D01G128900 chr5D 88.596 228 20 4 100 325 513474924 513475147 5.400000e-69 272.0
12 TraesCS3D01G128900 chr5A 85.217 230 29 2 89 318 454410765 454410989 9.160000e-57 231.0
13 TraesCS3D01G128900 chr1D 86.702 188 18 5 103 288 267787732 267787550 7.180000e-48 202.0
14 TraesCS3D01G128900 chr4A 90.551 127 11 1 3964 4089 658866348 658866222 2.620000e-37 167.0
15 TraesCS3D01G128900 chr6B 89.764 127 12 1 3964 4089 566632284 566632410 1.220000e-35 161.0
16 TraesCS3D01G128900 chr2A 84.483 174 16 5 3926 4089 50048241 50048413 1.220000e-35 161.0
17 TraesCS3D01G128900 chr2A 91.549 71 4 1 4158 4226 50048645 50048715 3.490000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G128900 chr3D 87928404 87932640 4236 True 3694.000000 6752 100.000000 1 4237 2 chr3D.!!$R1 4236
1 TraesCS3D01G128900 chr3A 104419136 104422453 3317 True 1521.333333 3517 89.404667 611 3852 3 chr3A.!!$R1 3241
2 TraesCS3D01G128900 chr3B 137325846 137329204 3358 True 1509.333333 3413 89.679333 588 3959 3 chr3B.!!$R1 3371


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
66 67 0.026803 CTGCCGCTGTCGCTATTTTC 59.973 55.0 0.00 0.0 0.0 2.29 F
237 238 0.035881 ATGGCTGCTCATATCCACGG 59.964 55.0 0.00 0.0 0.0 4.94 F
1187 1197 0.178935 ATTCCTGTGGTTGGTTGGGG 60.179 55.0 0.00 0.0 0.0 4.96 F
1953 1975 0.529773 GCAGACTGTGTCACGACCAA 60.530 55.0 3.99 0.0 34.6 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1553 1564 0.108186 CACTCTCCATGCAGGCGTAA 60.108 55.000 0.00 0.00 37.29 3.18 R
1940 1962 1.066071 TGGAAAGTTGGTCGTGACACA 60.066 47.619 6.37 0.00 0.00 3.72 R
2328 2350 0.877071 CCTTAACTGCCAGTGCACTG 59.123 55.000 35.15 35.15 44.23 3.66 R
3497 3533 0.239879 ATTACTGCAACGCAAACGGG 59.760 50.000 0.00 0.00 46.04 5.28 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.478540 GCCGCCTTTCCTCAACTAT 57.521 52.632 0.00 0.00 0.00 2.12
19 20 1.017387 GCCGCCTTTCCTCAACTATG 58.983 55.000 0.00 0.00 0.00 2.23
20 21 1.017387 CCGCCTTTCCTCAACTATGC 58.983 55.000 0.00 0.00 0.00 3.14
21 22 1.017387 CGCCTTTCCTCAACTATGCC 58.983 55.000 0.00 0.00 0.00 4.40
22 23 1.678728 CGCCTTTCCTCAACTATGCCA 60.679 52.381 0.00 0.00 0.00 4.92
23 24 1.745653 GCCTTTCCTCAACTATGCCAC 59.254 52.381 0.00 0.00 0.00 5.01
24 25 2.369394 CCTTTCCTCAACTATGCCACC 58.631 52.381 0.00 0.00 0.00 4.61
25 26 2.290896 CCTTTCCTCAACTATGCCACCA 60.291 50.000 0.00 0.00 0.00 4.17
26 27 2.489938 TTCCTCAACTATGCCACCAC 57.510 50.000 0.00 0.00 0.00 4.16
27 28 0.618458 TCCTCAACTATGCCACCACC 59.382 55.000 0.00 0.00 0.00 4.61
28 29 0.394352 CCTCAACTATGCCACCACCC 60.394 60.000 0.00 0.00 0.00 4.61
29 30 0.327924 CTCAACTATGCCACCACCCA 59.672 55.000 0.00 0.00 0.00 4.51
30 31 0.774276 TCAACTATGCCACCACCCAA 59.226 50.000 0.00 0.00 0.00 4.12
31 32 1.357420 TCAACTATGCCACCACCCAAT 59.643 47.619 0.00 0.00 0.00 3.16
32 33 2.178580 CAACTATGCCACCACCCAATT 58.821 47.619 0.00 0.00 0.00 2.32
33 34 3.010696 TCAACTATGCCACCACCCAATTA 59.989 43.478 0.00 0.00 0.00 1.40
34 35 3.748645 ACTATGCCACCACCCAATTAA 57.251 42.857 0.00 0.00 0.00 1.40
35 36 4.054359 ACTATGCCACCACCCAATTAAA 57.946 40.909 0.00 0.00 0.00 1.52
36 37 4.421131 ACTATGCCACCACCCAATTAAAA 58.579 39.130 0.00 0.00 0.00 1.52
37 38 4.841246 ACTATGCCACCACCCAATTAAAAA 59.159 37.500 0.00 0.00 0.00 1.94
38 39 4.925390 ATGCCACCACCCAATTAAAAAT 57.075 36.364 0.00 0.00 0.00 1.82
39 40 4.278975 TGCCACCACCCAATTAAAAATC 57.721 40.909 0.00 0.00 0.00 2.17
40 41 3.008485 TGCCACCACCCAATTAAAAATCC 59.992 43.478 0.00 0.00 0.00 3.01
41 42 3.621214 GCCACCACCCAATTAAAAATCCC 60.621 47.826 0.00 0.00 0.00 3.85
42 43 3.584848 CCACCACCCAATTAAAAATCCCA 59.415 43.478 0.00 0.00 0.00 4.37
43 44 4.564613 CCACCACCCAATTAAAAATCCCAC 60.565 45.833 0.00 0.00 0.00 4.61
44 45 3.585289 ACCACCCAATTAAAAATCCCACC 59.415 43.478 0.00 0.00 0.00 4.61
45 46 3.054728 CCACCCAATTAAAAATCCCACCC 60.055 47.826 0.00 0.00 0.00 4.61
46 47 2.835156 ACCCAATTAAAAATCCCACCCG 59.165 45.455 0.00 0.00 0.00 5.28
47 48 2.419436 CCCAATTAAAAATCCCACCCGC 60.419 50.000 0.00 0.00 0.00 6.13
48 49 2.499693 CCAATTAAAAATCCCACCCGCT 59.500 45.455 0.00 0.00 0.00 5.52
49 50 3.520569 CAATTAAAAATCCCACCCGCTG 58.479 45.455 0.00 0.00 0.00 5.18
50 51 0.892063 TTAAAAATCCCACCCGCTGC 59.108 50.000 0.00 0.00 0.00 5.25
51 52 0.968393 TAAAAATCCCACCCGCTGCC 60.968 55.000 0.00 0.00 0.00 4.85
63 64 2.892425 GCTGCCGCTGTCGCTATT 60.892 61.111 0.00 0.00 0.00 1.73
64 65 2.464459 GCTGCCGCTGTCGCTATTT 61.464 57.895 0.00 0.00 0.00 1.40
65 66 1.982073 GCTGCCGCTGTCGCTATTTT 61.982 55.000 0.00 0.00 0.00 1.82
66 67 0.026803 CTGCCGCTGTCGCTATTTTC 59.973 55.000 0.00 0.00 0.00 2.29
67 68 0.672091 TGCCGCTGTCGCTATTTTCA 60.672 50.000 0.00 0.00 0.00 2.69
68 69 0.657840 GCCGCTGTCGCTATTTTCAT 59.342 50.000 0.00 0.00 0.00 2.57
69 70 1.064060 GCCGCTGTCGCTATTTTCATT 59.936 47.619 0.00 0.00 0.00 2.57
70 71 2.851008 GCCGCTGTCGCTATTTTCATTC 60.851 50.000 0.00 0.00 0.00 2.67
71 72 2.597505 CCGCTGTCGCTATTTTCATTCG 60.598 50.000 0.00 0.00 0.00 3.34
72 73 2.281498 CGCTGTCGCTATTTTCATTCGA 59.719 45.455 0.00 0.00 0.00 3.71
73 74 3.600235 CGCTGTCGCTATTTTCATTCGAG 60.600 47.826 0.00 0.00 0.00 4.04
74 75 3.551890 GCTGTCGCTATTTTCATTCGAGA 59.448 43.478 0.00 0.00 0.00 4.04
75 76 4.317698 GCTGTCGCTATTTTCATTCGAGAG 60.318 45.833 0.00 0.00 41.50 3.20
76 77 3.551890 TGTCGCTATTTTCATTCGAGAGC 59.448 43.478 0.00 0.00 0.00 4.09
77 78 3.147104 CGCTATTTTCATTCGAGAGCG 57.853 47.619 0.00 0.00 44.31 5.03
93 94 3.842923 CGAGCAGGGCGTGAGGAT 61.843 66.667 12.03 0.00 0.00 3.24
94 95 2.586792 GAGCAGGGCGTGAGGATT 59.413 61.111 12.03 0.00 0.00 3.01
95 96 1.823295 GAGCAGGGCGTGAGGATTA 59.177 57.895 12.03 0.00 0.00 1.75
96 97 0.394565 GAGCAGGGCGTGAGGATTAT 59.605 55.000 12.03 0.00 0.00 1.28
97 98 0.107456 AGCAGGGCGTGAGGATTATG 59.893 55.000 12.03 0.00 0.00 1.90
98 99 0.179045 GCAGGGCGTGAGGATTATGT 60.179 55.000 12.03 0.00 0.00 2.29
99 100 1.747206 GCAGGGCGTGAGGATTATGTT 60.747 52.381 12.03 0.00 0.00 2.71
100 101 2.213499 CAGGGCGTGAGGATTATGTTC 58.787 52.381 0.00 0.00 0.00 3.18
101 102 1.837439 AGGGCGTGAGGATTATGTTCA 59.163 47.619 0.00 0.00 0.00 3.18
102 103 2.158900 AGGGCGTGAGGATTATGTTCAG 60.159 50.000 0.00 0.00 0.00 3.02
103 104 2.213499 GGCGTGAGGATTATGTTCAGG 58.787 52.381 0.00 0.00 0.00 3.86
104 105 2.158957 GGCGTGAGGATTATGTTCAGGA 60.159 50.000 0.00 0.00 0.00 3.86
105 106 3.126831 GCGTGAGGATTATGTTCAGGAG 58.873 50.000 0.00 0.00 0.00 3.69
106 107 3.722147 CGTGAGGATTATGTTCAGGAGG 58.278 50.000 0.00 0.00 0.00 4.30
107 108 3.133003 CGTGAGGATTATGTTCAGGAGGT 59.867 47.826 0.00 0.00 0.00 3.85
108 109 4.446371 GTGAGGATTATGTTCAGGAGGTG 58.554 47.826 0.00 0.00 0.00 4.00
109 110 3.455910 TGAGGATTATGTTCAGGAGGTGG 59.544 47.826 0.00 0.00 0.00 4.61
110 111 2.780010 AGGATTATGTTCAGGAGGTGGG 59.220 50.000 0.00 0.00 0.00 4.61
111 112 2.777692 GGATTATGTTCAGGAGGTGGGA 59.222 50.000 0.00 0.00 0.00 4.37
112 113 3.181450 GGATTATGTTCAGGAGGTGGGAG 60.181 52.174 0.00 0.00 0.00 4.30
113 114 2.642171 TATGTTCAGGAGGTGGGAGT 57.358 50.000 0.00 0.00 0.00 3.85
114 115 1.747444 ATGTTCAGGAGGTGGGAGTT 58.253 50.000 0.00 0.00 0.00 3.01
115 116 0.764890 TGTTCAGGAGGTGGGAGTTG 59.235 55.000 0.00 0.00 0.00 3.16
116 117 0.036875 GTTCAGGAGGTGGGAGTTGG 59.963 60.000 0.00 0.00 0.00 3.77
117 118 1.133809 TTCAGGAGGTGGGAGTTGGG 61.134 60.000 0.00 0.00 0.00 4.12
118 119 2.204151 AGGAGGTGGGAGTTGGGG 60.204 66.667 0.00 0.00 0.00 4.96
119 120 2.204090 GGAGGTGGGAGTTGGGGA 60.204 66.667 0.00 0.00 0.00 4.81
120 121 1.850755 GGAGGTGGGAGTTGGGGAA 60.851 63.158 0.00 0.00 0.00 3.97
121 122 1.432023 GGAGGTGGGAGTTGGGGAAA 61.432 60.000 0.00 0.00 0.00 3.13
122 123 0.251209 GAGGTGGGAGTTGGGGAAAC 60.251 60.000 0.00 0.00 39.24 2.78
133 134 4.052519 GGGAAACCGTTTCAGCGA 57.947 55.556 22.39 0.00 43.64 4.93
134 135 1.572941 GGGAAACCGTTTCAGCGAC 59.427 57.895 22.39 7.33 43.64 5.19
135 136 1.203313 GGAAACCGTTTCAGCGACG 59.797 57.895 22.39 0.00 41.43 5.12
136 137 1.216941 GGAAACCGTTTCAGCGACGA 61.217 55.000 22.39 0.00 42.82 4.20
137 138 0.161024 GAAACCGTTTCAGCGACGAG 59.839 55.000 17.42 0.00 42.82 4.18
138 139 0.249155 AAACCGTTTCAGCGACGAGA 60.249 50.000 0.00 0.00 42.82 4.04
139 140 0.249155 AACCGTTTCAGCGACGAGAA 60.249 50.000 0.00 0.00 42.82 2.87
140 141 0.938168 ACCGTTTCAGCGACGAGAAC 60.938 55.000 0.00 0.00 42.82 3.01
141 142 1.407329 CGTTTCAGCGACGAGAACG 59.593 57.895 0.00 5.13 42.82 3.95
159 160 4.803426 CGAGTGGCTGCCCTCGTC 62.803 72.222 32.83 18.48 44.14 4.20
160 161 4.459089 GAGTGGCTGCCCTCGTCC 62.459 72.222 17.53 0.00 0.00 4.79
165 166 4.803426 GCTGCCCTCGTCCGTGAG 62.803 72.222 0.00 0.00 35.70 3.51
166 167 3.062466 CTGCCCTCGTCCGTGAGA 61.062 66.667 0.00 0.00 38.28 3.27
167 168 2.599281 TGCCCTCGTCCGTGAGAA 60.599 61.111 0.00 0.00 38.28 2.87
168 169 2.182030 GCCCTCGTCCGTGAGAAG 59.818 66.667 0.00 0.00 38.28 2.85
169 170 2.341101 GCCCTCGTCCGTGAGAAGA 61.341 63.158 0.00 0.00 38.28 2.87
170 171 1.874345 GCCCTCGTCCGTGAGAAGAA 61.874 60.000 0.00 0.00 38.28 2.52
171 172 0.818296 CCCTCGTCCGTGAGAAGAAT 59.182 55.000 0.00 0.00 38.28 2.40
172 173 2.022195 CCCTCGTCCGTGAGAAGAATA 58.978 52.381 0.00 0.00 38.28 1.75
173 174 2.623889 CCCTCGTCCGTGAGAAGAATAT 59.376 50.000 0.00 0.00 38.28 1.28
174 175 3.551046 CCCTCGTCCGTGAGAAGAATATG 60.551 52.174 0.00 0.00 38.28 1.78
175 176 3.315470 CCTCGTCCGTGAGAAGAATATGA 59.685 47.826 0.00 0.00 38.28 2.15
176 177 4.283678 CTCGTCCGTGAGAAGAATATGAC 58.716 47.826 0.00 0.00 38.28 3.06
177 178 3.036633 CGTCCGTGAGAAGAATATGACG 58.963 50.000 0.00 0.00 0.00 4.35
178 179 3.372954 GTCCGTGAGAAGAATATGACGG 58.627 50.000 0.00 0.00 46.09 4.79
179 180 2.128035 CCGTGAGAAGAATATGACGGC 58.872 52.381 0.00 0.00 39.84 5.68
180 181 2.223829 CCGTGAGAAGAATATGACGGCT 60.224 50.000 0.00 0.00 39.84 5.52
181 182 3.046390 CGTGAGAAGAATATGACGGCTC 58.954 50.000 0.00 0.00 0.00 4.70
182 183 3.243234 CGTGAGAAGAATATGACGGCTCT 60.243 47.826 0.00 0.00 0.00 4.09
183 184 4.295051 GTGAGAAGAATATGACGGCTCTC 58.705 47.826 0.00 0.00 0.00 3.20
184 185 3.003793 TGAGAAGAATATGACGGCTCTCG 59.996 47.826 0.00 0.00 45.88 4.04
193 194 2.125912 CGGCTCTCGTCAACCAGG 60.126 66.667 0.00 0.00 0.00 4.45
194 195 2.932234 CGGCTCTCGTCAACCAGGT 61.932 63.158 0.00 0.00 0.00 4.00
195 196 1.371558 GGCTCTCGTCAACCAGGTT 59.628 57.895 0.00 0.00 0.00 3.50
196 197 0.250338 GGCTCTCGTCAACCAGGTTT 60.250 55.000 0.44 0.00 0.00 3.27
197 198 1.594331 GCTCTCGTCAACCAGGTTTT 58.406 50.000 0.44 0.00 0.00 2.43
198 199 2.549349 GGCTCTCGTCAACCAGGTTTTA 60.549 50.000 0.44 0.00 0.00 1.52
199 200 2.479275 GCTCTCGTCAACCAGGTTTTAC 59.521 50.000 0.44 3.25 0.00 2.01
200 201 3.724374 CTCTCGTCAACCAGGTTTTACA 58.276 45.455 0.44 0.00 0.00 2.41
201 202 3.460103 TCTCGTCAACCAGGTTTTACAC 58.540 45.455 0.44 0.00 0.00 2.90
218 219 8.938906 GGTTTTACACCGAATATTCTCTAAACA 58.061 33.333 13.45 0.00 35.12 2.83
221 222 8.657074 TTACACCGAATATTCTCTAAACATGG 57.343 34.615 13.45 6.34 0.00 3.66
222 223 5.527582 ACACCGAATATTCTCTAAACATGGC 59.472 40.000 13.45 0.00 0.00 4.40
223 224 5.760253 CACCGAATATTCTCTAAACATGGCT 59.240 40.000 13.45 0.00 0.00 4.75
224 225 5.760253 ACCGAATATTCTCTAAACATGGCTG 59.240 40.000 13.45 0.00 0.00 4.85
225 226 5.334414 CCGAATATTCTCTAAACATGGCTGC 60.334 44.000 13.45 0.00 0.00 5.25
226 227 5.468072 CGAATATTCTCTAAACATGGCTGCT 59.532 40.000 13.45 0.00 0.00 4.24
227 228 6.347240 CGAATATTCTCTAAACATGGCTGCTC 60.347 42.308 13.45 0.00 0.00 4.26
228 229 3.701205 TTCTCTAAACATGGCTGCTCA 57.299 42.857 0.00 0.00 0.00 4.26
229 230 3.920231 TCTCTAAACATGGCTGCTCAT 57.080 42.857 0.00 0.00 0.00 2.90
230 231 5.357742 TTCTCTAAACATGGCTGCTCATA 57.642 39.130 0.00 0.00 0.00 2.15
231 232 5.557576 TCTCTAAACATGGCTGCTCATAT 57.442 39.130 0.00 0.00 0.00 1.78
232 233 5.545588 TCTCTAAACATGGCTGCTCATATC 58.454 41.667 0.00 0.00 0.00 1.63
233 234 4.645535 TCTAAACATGGCTGCTCATATCC 58.354 43.478 0.00 0.00 0.00 2.59
234 235 3.301794 AAACATGGCTGCTCATATCCA 57.698 42.857 0.00 0.00 0.00 3.41
235 236 2.267174 ACATGGCTGCTCATATCCAC 57.733 50.000 0.00 0.00 0.00 4.02
236 237 1.154197 CATGGCTGCTCATATCCACG 58.846 55.000 0.00 0.00 0.00 4.94
237 238 0.035881 ATGGCTGCTCATATCCACGG 59.964 55.000 0.00 0.00 0.00 4.94
238 239 1.337384 TGGCTGCTCATATCCACGGT 61.337 55.000 0.00 0.00 0.00 4.83
239 240 0.679505 GGCTGCTCATATCCACGGTA 59.320 55.000 0.00 0.00 0.00 4.02
240 241 1.276421 GGCTGCTCATATCCACGGTAT 59.724 52.381 0.00 0.00 0.00 2.73
241 242 2.611518 GCTGCTCATATCCACGGTATC 58.388 52.381 0.00 0.00 0.00 2.24
242 243 2.675317 GCTGCTCATATCCACGGTATCC 60.675 54.545 0.00 0.00 0.00 2.59
243 244 2.828520 CTGCTCATATCCACGGTATCCT 59.171 50.000 0.00 0.00 0.00 3.24
244 245 2.826128 TGCTCATATCCACGGTATCCTC 59.174 50.000 0.00 0.00 0.00 3.71
245 246 3.093057 GCTCATATCCACGGTATCCTCT 58.907 50.000 0.00 0.00 0.00 3.69
246 247 3.129638 GCTCATATCCACGGTATCCTCTC 59.870 52.174 0.00 0.00 0.00 3.20
247 248 4.594970 CTCATATCCACGGTATCCTCTCT 58.405 47.826 0.00 0.00 0.00 3.10
248 249 4.999310 TCATATCCACGGTATCCTCTCTT 58.001 43.478 0.00 0.00 0.00 2.85
249 250 5.394738 TCATATCCACGGTATCCTCTCTTT 58.605 41.667 0.00 0.00 0.00 2.52
250 251 5.477291 TCATATCCACGGTATCCTCTCTTTC 59.523 44.000 0.00 0.00 0.00 2.62
251 252 3.095912 TCCACGGTATCCTCTCTTTCA 57.904 47.619 0.00 0.00 0.00 2.69
252 253 3.437213 TCCACGGTATCCTCTCTTTCAA 58.563 45.455 0.00 0.00 0.00 2.69
253 254 3.835978 TCCACGGTATCCTCTCTTTCAAA 59.164 43.478 0.00 0.00 0.00 2.69
254 255 3.933332 CCACGGTATCCTCTCTTTCAAAC 59.067 47.826 0.00 0.00 0.00 2.93
255 256 3.612860 CACGGTATCCTCTCTTTCAAACG 59.387 47.826 0.00 0.00 0.00 3.60
256 257 3.187700 CGGTATCCTCTCTTTCAAACGG 58.812 50.000 0.00 0.00 0.00 4.44
257 258 2.937149 GGTATCCTCTCTTTCAAACGGC 59.063 50.000 0.00 0.00 0.00 5.68
258 259 3.369576 GGTATCCTCTCTTTCAAACGGCT 60.370 47.826 0.00 0.00 0.00 5.52
259 260 2.169832 TCCTCTCTTTCAAACGGCTG 57.830 50.000 0.00 0.00 0.00 4.85
260 261 1.160137 CCTCTCTTTCAAACGGCTGG 58.840 55.000 0.00 0.00 0.00 4.85
261 262 1.543429 CCTCTCTTTCAAACGGCTGGT 60.543 52.381 0.00 0.00 0.00 4.00
262 263 2.289444 CCTCTCTTTCAAACGGCTGGTA 60.289 50.000 0.00 0.00 0.00 3.25
263 264 3.600388 CTCTCTTTCAAACGGCTGGTAT 58.400 45.455 0.00 0.00 0.00 2.73
264 265 3.596214 TCTCTTTCAAACGGCTGGTATC 58.404 45.455 0.00 0.00 0.00 2.24
265 266 3.007506 TCTCTTTCAAACGGCTGGTATCA 59.992 43.478 0.00 0.00 0.00 2.15
266 267 3.941483 CTCTTTCAAACGGCTGGTATCAT 59.059 43.478 0.00 0.00 0.00 2.45
267 268 3.938963 TCTTTCAAACGGCTGGTATCATC 59.061 43.478 0.00 0.00 0.00 2.92
268 269 2.325583 TCAAACGGCTGGTATCATCC 57.674 50.000 0.00 0.00 0.00 3.51
269 270 1.837439 TCAAACGGCTGGTATCATCCT 59.163 47.619 0.00 0.00 0.00 3.24
270 271 3.035363 TCAAACGGCTGGTATCATCCTA 58.965 45.455 0.00 0.00 0.00 2.94
271 272 3.452990 TCAAACGGCTGGTATCATCCTAA 59.547 43.478 0.00 0.00 0.00 2.69
272 273 4.080807 TCAAACGGCTGGTATCATCCTAAA 60.081 41.667 0.00 0.00 0.00 1.85
273 274 4.497291 AACGGCTGGTATCATCCTAAAA 57.503 40.909 0.00 0.00 0.00 1.52
274 275 4.706842 ACGGCTGGTATCATCCTAAAAT 57.293 40.909 0.00 0.00 0.00 1.82
275 276 5.818678 ACGGCTGGTATCATCCTAAAATA 57.181 39.130 0.00 0.00 0.00 1.40
276 277 6.374417 ACGGCTGGTATCATCCTAAAATAT 57.626 37.500 0.00 0.00 0.00 1.28
277 278 6.173339 ACGGCTGGTATCATCCTAAAATATG 58.827 40.000 0.00 0.00 0.00 1.78
278 279 5.586243 CGGCTGGTATCATCCTAAAATATGG 59.414 44.000 0.00 0.00 0.00 2.74
279 280 5.358160 GGCTGGTATCATCCTAAAATATGGC 59.642 44.000 0.00 0.00 0.00 4.40
280 281 6.183347 GCTGGTATCATCCTAAAATATGGCT 58.817 40.000 0.00 0.00 0.00 4.75
281 282 7.338710 GCTGGTATCATCCTAAAATATGGCTA 58.661 38.462 0.00 0.00 0.00 3.93
282 283 7.995488 GCTGGTATCATCCTAAAATATGGCTAT 59.005 37.037 0.00 0.00 0.00 2.97
283 284 9.553064 CTGGTATCATCCTAAAATATGGCTATC 57.447 37.037 0.00 0.00 0.00 2.08
284 285 8.494433 TGGTATCATCCTAAAATATGGCTATCC 58.506 37.037 0.00 0.00 0.00 2.59
285 286 7.939588 GGTATCATCCTAAAATATGGCTATCCC 59.060 40.741 0.00 0.00 0.00 3.85
286 287 7.777889 ATCATCCTAAAATATGGCTATCCCT 57.222 36.000 0.00 0.00 0.00 4.20
287 288 7.200434 TCATCCTAAAATATGGCTATCCCTC 57.800 40.000 0.00 0.00 0.00 4.30
288 289 6.735229 TCATCCTAAAATATGGCTATCCCTCA 59.265 38.462 0.00 0.00 0.00 3.86
289 290 7.407033 TCATCCTAAAATATGGCTATCCCTCAT 59.593 37.037 0.00 0.00 0.00 2.90
290 291 7.200434 TCCTAAAATATGGCTATCCCTCATC 57.800 40.000 0.00 0.00 0.00 2.92
291 292 6.158695 TCCTAAAATATGGCTATCCCTCATCC 59.841 42.308 0.00 0.00 0.00 3.51
292 293 5.865977 AAAATATGGCTATCCCTCATCCA 57.134 39.130 0.00 0.00 0.00 3.41
293 294 4.851639 AATATGGCTATCCCTCATCCAC 57.148 45.455 0.00 0.00 0.00 4.02
294 295 1.366319 ATGGCTATCCCTCATCCACC 58.634 55.000 0.00 0.00 0.00 4.61
295 296 0.768221 TGGCTATCCCTCATCCACCC 60.768 60.000 0.00 0.00 0.00 4.61
296 297 0.768221 GGCTATCCCTCATCCACCCA 60.768 60.000 0.00 0.00 0.00 4.51
297 298 1.366319 GCTATCCCTCATCCACCCAT 58.634 55.000 0.00 0.00 0.00 4.00
298 299 1.004044 GCTATCCCTCATCCACCCATG 59.996 57.143 0.00 0.00 0.00 3.66
314 315 2.600164 TGGACAGCCAGCAAACCA 59.400 55.556 0.00 0.00 39.92 3.67
315 316 1.076412 TGGACAGCCAGCAAACCAA 60.076 52.632 0.00 0.00 39.92 3.67
316 317 0.685785 TGGACAGCCAGCAAACCAAA 60.686 50.000 0.00 0.00 39.92 3.28
317 318 0.249447 GGACAGCCAGCAAACCAAAC 60.249 55.000 0.00 0.00 0.00 2.93
318 319 0.594796 GACAGCCAGCAAACCAAACG 60.595 55.000 0.00 0.00 0.00 3.60
319 320 1.300080 CAGCCAGCAAACCAAACGG 60.300 57.895 0.00 0.00 0.00 4.44
320 321 2.661537 GCCAGCAAACCAAACGGC 60.662 61.111 0.00 0.00 0.00 5.68
321 322 2.028925 CCAGCAAACCAAACGGCC 59.971 61.111 0.00 0.00 0.00 6.13
322 323 2.028925 CAGCAAACCAAACGGCCC 59.971 61.111 0.00 0.00 0.00 5.80
323 324 3.230990 AGCAAACCAAACGGCCCC 61.231 61.111 0.00 0.00 0.00 5.80
324 325 4.308458 GCAAACCAAACGGCCCCC 62.308 66.667 0.00 0.00 0.00 5.40
325 326 2.840102 CAAACCAAACGGCCCCCA 60.840 61.111 0.00 0.00 0.00 4.96
326 327 2.041819 AAACCAAACGGCCCCCAA 60.042 55.556 0.00 0.00 0.00 4.12
327 328 2.137528 AAACCAAACGGCCCCCAAG 61.138 57.895 0.00 0.00 0.00 3.61
328 329 2.882403 AAACCAAACGGCCCCCAAGT 62.882 55.000 0.00 0.00 0.00 3.16
329 330 2.989253 CCAAACGGCCCCCAAGTC 60.989 66.667 0.00 0.00 0.00 3.01
330 331 2.203422 CAAACGGCCCCCAAGTCA 60.203 61.111 0.00 0.00 0.00 3.41
331 332 1.606313 CAAACGGCCCCCAAGTCAT 60.606 57.895 0.00 0.00 0.00 3.06
332 333 1.304134 AAACGGCCCCCAAGTCATC 60.304 57.895 0.00 0.00 0.00 2.92
333 334 2.075355 AAACGGCCCCCAAGTCATCA 62.075 55.000 0.00 0.00 0.00 3.07
334 335 1.863155 AACGGCCCCCAAGTCATCAT 61.863 55.000 0.00 0.00 0.00 2.45
335 336 1.526917 CGGCCCCCAAGTCATCATC 60.527 63.158 0.00 0.00 0.00 2.92
336 337 1.152673 GGCCCCCAAGTCATCATCC 60.153 63.158 0.00 0.00 0.00 3.51
337 338 1.649271 GGCCCCCAAGTCATCATCCT 61.649 60.000 0.00 0.00 0.00 3.24
338 339 0.466922 GCCCCCAAGTCATCATCCTG 60.467 60.000 0.00 0.00 0.00 3.86
339 340 1.216064 CCCCCAAGTCATCATCCTGA 58.784 55.000 0.00 0.00 0.00 3.86
340 341 1.779092 CCCCCAAGTCATCATCCTGAT 59.221 52.381 0.00 0.00 37.65 2.90
341 342 2.224719 CCCCCAAGTCATCATCCTGATC 60.225 54.545 0.00 0.00 34.28 2.92
342 343 2.224719 CCCCAAGTCATCATCCTGATCC 60.225 54.545 0.00 0.00 34.28 3.36
343 344 2.224719 CCCAAGTCATCATCCTGATCCC 60.225 54.545 0.00 0.00 34.28 3.85
667 668 3.712881 GGAGTTGCACCGCACGTC 61.713 66.667 0.00 0.00 38.71 4.34
701 702 1.066858 CACCGAACAGCACATCCTAGT 60.067 52.381 0.00 0.00 0.00 2.57
702 703 2.165641 CACCGAACAGCACATCCTAGTA 59.834 50.000 0.00 0.00 0.00 1.82
703 704 2.165845 ACCGAACAGCACATCCTAGTAC 59.834 50.000 0.00 0.00 0.00 2.73
704 705 2.427453 CCGAACAGCACATCCTAGTACT 59.573 50.000 0.00 0.00 0.00 2.73
705 706 3.489398 CCGAACAGCACATCCTAGTACTC 60.489 52.174 0.00 0.00 0.00 2.59
706 707 3.489398 CGAACAGCACATCCTAGTACTCC 60.489 52.174 0.00 0.00 0.00 3.85
844 851 3.596066 CTGCTGTCTCCACCCCGTG 62.596 68.421 0.00 0.00 0.00 4.94
868 875 3.812167 GCAATCTCTCTCCACTGGGTTTT 60.812 47.826 0.00 0.00 34.93 2.43
903 910 3.517602 TCGTTCATCCACCGATTAGTTG 58.482 45.455 0.00 0.00 0.00 3.16
988 996 1.296056 CCTGCTGTTTTACCCGTCGG 61.296 60.000 3.60 3.60 0.00 4.79
1091 1099 1.971167 GTGCCGGCACCTTCATCAA 60.971 57.895 43.24 10.31 40.79 2.57
1092 1100 1.971167 TGCCGGCACCTTCATCAAC 60.971 57.895 29.03 0.00 0.00 3.18
1103 1111 5.412594 GCACCTTCATCAACTTCATAGTTCA 59.587 40.000 0.00 0.00 42.67 3.18
1120 1128 3.575687 AGTTCAGAGCTTTTCCCCATTTG 59.424 43.478 0.00 0.00 0.00 2.32
1132 1140 2.896685 TCCCCATTTGTTTTCGCTCAAT 59.103 40.909 0.00 0.00 0.00 2.57
1153 1161 1.098712 GGTCCGAGCTCTGATCGAGT 61.099 60.000 12.85 4.01 42.76 4.18
1164 1172 4.038642 GCTCTGATCGAGTCCTAAAATCCT 59.961 45.833 13.56 0.00 41.98 3.24
1171 1179 7.495934 TGATCGAGTCCTAAAATCCTCAAATTC 59.504 37.037 0.00 0.00 0.00 2.17
1176 1184 6.660949 AGTCCTAAAATCCTCAAATTCCTGTG 59.339 38.462 0.00 0.00 0.00 3.66
1177 1185 5.951747 TCCTAAAATCCTCAAATTCCTGTGG 59.048 40.000 0.00 0.00 0.00 4.17
1178 1186 5.716703 CCTAAAATCCTCAAATTCCTGTGGT 59.283 40.000 0.00 0.00 32.78 4.16
1179 1187 6.211384 CCTAAAATCCTCAAATTCCTGTGGTT 59.789 38.462 0.00 0.00 32.78 3.67
1180 1188 5.473066 AAATCCTCAAATTCCTGTGGTTG 57.527 39.130 0.00 0.00 32.78 3.77
1181 1189 2.875296 TCCTCAAATTCCTGTGGTTGG 58.125 47.619 0.00 0.00 32.78 3.77
1187 1197 0.178935 ATTCCTGTGGTTGGTTGGGG 60.179 55.000 0.00 0.00 0.00 4.96
1191 1201 2.917227 GTGGTTGGTTGGGGCCTG 60.917 66.667 0.84 0.00 0.00 4.85
1195 1205 1.304134 GTTGGTTGGGGCCTGGTAG 60.304 63.158 0.84 0.00 0.00 3.18
1214 1224 1.134560 AGGCTAATCGGTTCACTCGTC 59.865 52.381 0.00 0.00 0.00 4.20
1217 1227 3.548415 GGCTAATCGGTTCACTCGTCTAG 60.548 52.174 0.00 0.00 0.00 2.43
1257 1268 7.071069 TGTTATATTCATCTGTGCCATCTCT 57.929 36.000 0.00 0.00 0.00 3.10
1258 1269 7.157347 TGTTATATTCATCTGTGCCATCTCTC 58.843 38.462 0.00 0.00 0.00 3.20
1259 1270 7.015974 TGTTATATTCATCTGTGCCATCTCTCT 59.984 37.037 0.00 0.00 0.00 3.10
1318 1329 3.074390 TCATGATGACCCTGGTTTTCACT 59.926 43.478 0.00 0.00 0.00 3.41
1415 1426 3.072944 AGAGTTGAGCTCATTTCAGCAC 58.927 45.455 19.04 10.83 46.47 4.40
1553 1564 6.520272 TGTTTATGCAACCTGTTTAATGCTT 58.480 32.000 0.00 0.00 39.49 3.91
1576 1587 0.610232 GCCTGCATGGAGAGTGGTTT 60.610 55.000 16.85 0.00 38.35 3.27
1683 1694 2.357323 GGCTATGAGCTTTGAAGAAGGC 59.643 50.000 0.00 0.00 41.99 4.35
1736 1748 8.783093 CAATGTTATCACAGTTGAGGTTTTCTA 58.217 33.333 0.00 0.00 35.94 2.10
1737 1749 9.520515 AATGTTATCACAGTTGAGGTTTTCTAT 57.479 29.630 0.00 0.00 35.94 1.98
1749 1761 6.779860 TGAGGTTTTCTATTTAGCTTCTGGT 58.220 36.000 0.00 0.00 0.00 4.00
1781 1801 4.022849 GTCCTTTTTGCTCTGTGCTTACAT 60.023 41.667 3.20 0.00 43.37 2.29
1854 1874 3.921119 TGTTGCACTATCAGCTTTTGG 57.079 42.857 0.00 0.00 0.00 3.28
1876 1897 5.243507 TGGCAAGCAAATCAGATTGTTTCTA 59.756 36.000 0.00 0.00 37.24 2.10
1878 1899 6.474751 GGCAAGCAAATCAGATTGTTTCTATC 59.525 38.462 0.00 0.00 37.24 2.08
1881 1902 7.383102 AGCAAATCAGATTGTTTCTATCGTT 57.617 32.000 0.00 0.00 31.77 3.85
1940 1962 4.397417 GCATGATAACTGGAAAAGCAGACT 59.603 41.667 0.00 0.00 0.00 3.24
1953 1975 0.529773 GCAGACTGTGTCACGACCAA 60.530 55.000 3.99 0.00 34.60 3.67
2036 2058 2.607635 CACAAGTGCAACACGAGTAACT 59.392 45.455 0.00 0.00 41.43 2.24
2087 2109 3.084786 GCCTACAAGCAAAGGTTCTGAT 58.915 45.455 0.00 0.00 35.16 2.90
2143 2165 2.484742 TGCACACATGAGCTTCAGAT 57.515 45.000 0.00 0.00 32.76 2.90
2163 2185 9.671279 TTCAGATCATTTAGATTCAAGCACTTA 57.329 29.630 0.00 0.00 37.00 2.24
2205 2227 6.237384 CGCATCACATGAAAATTGTAAAGCTC 60.237 38.462 0.00 0.00 0.00 4.09
2209 2231 9.715121 ATCACATGAAAATTGTAAAGCTCAATT 57.285 25.926 0.00 6.14 44.14 2.32
2226 2248 8.114331 AGCTCAATTTTGTGTCATATTCTTCA 57.886 30.769 0.00 0.00 0.00 3.02
2271 2293 7.342541 TGATGAAATCTTTGCCAGGATATCAAA 59.657 33.333 4.83 0.00 45.81 2.69
2379 2401 8.256605 CAGCAATATGGTAAGCTATATCTCAGT 58.743 37.037 0.00 0.00 35.19 3.41
2500 2522 3.324993 CTCAAGGAGAGTGTCAAAGCTC 58.675 50.000 0.00 0.00 39.62 4.09
2528 2550 0.824759 GTGGCTCGTCATAACCTCCT 59.175 55.000 0.00 0.00 0.00 3.69
2556 2578 9.167311 GATGATGTACTTTCAGTTTTAGATGGT 57.833 33.333 0.00 0.00 0.00 3.55
2566 2588 7.377766 TCAGTTTTAGATGGTAGACAATTGC 57.622 36.000 5.05 0.00 0.00 3.56
2577 2599 4.321974 GGTAGACAATTGCCTCAAAAAGGG 60.322 45.833 5.05 0.00 46.32 3.95
2602 2629 2.990066 AGGAACTAGCCATGTGTAGC 57.010 50.000 0.00 0.00 36.02 3.58
2603 2630 2.187958 AGGAACTAGCCATGTGTAGCA 58.812 47.619 0.00 0.00 36.02 3.49
2604 2631 2.093447 AGGAACTAGCCATGTGTAGCAC 60.093 50.000 0.00 0.00 36.02 4.40
2605 2632 2.093447 GGAACTAGCCATGTGTAGCACT 60.093 50.000 0.90 0.00 35.11 4.40
2606 2633 2.969628 ACTAGCCATGTGTAGCACTC 57.030 50.000 0.90 0.00 35.11 3.51
2607 2634 1.135139 ACTAGCCATGTGTAGCACTCG 59.865 52.381 0.90 0.00 35.11 4.18
2608 2635 1.405463 CTAGCCATGTGTAGCACTCGA 59.595 52.381 0.90 0.00 35.11 4.04
2609 2636 0.174389 AGCCATGTGTAGCACTCGAG 59.826 55.000 11.84 11.84 35.11 4.04
2610 2637 0.173481 GCCATGTGTAGCACTCGAGA 59.827 55.000 21.68 0.00 35.11 4.04
2611 2638 1.202463 GCCATGTGTAGCACTCGAGAT 60.202 52.381 21.68 7.12 35.11 2.75
2612 2639 2.739932 GCCATGTGTAGCACTCGAGATT 60.740 50.000 21.68 6.38 35.11 2.40
2613 2640 3.119291 CCATGTGTAGCACTCGAGATTC 58.881 50.000 21.68 7.32 35.11 2.52
2614 2641 3.181482 CCATGTGTAGCACTCGAGATTCT 60.181 47.826 21.68 14.31 35.11 2.40
2615 2642 3.494045 TGTGTAGCACTCGAGATTCTG 57.506 47.619 21.68 8.00 35.11 3.02
2616 2643 2.189342 GTGTAGCACTCGAGATTCTGC 58.811 52.381 21.68 18.23 0.00 4.26
2617 2644 1.818674 TGTAGCACTCGAGATTCTGCA 59.181 47.619 21.68 17.55 31.71 4.41
2618 2645 2.428530 TGTAGCACTCGAGATTCTGCAT 59.571 45.455 21.68 10.47 31.71 3.96
2619 2646 2.222007 AGCACTCGAGATTCTGCATC 57.778 50.000 21.68 0.00 31.71 3.91
2620 2647 1.479730 AGCACTCGAGATTCTGCATCA 59.520 47.619 21.68 0.00 33.75 3.07
2621 2648 2.102757 AGCACTCGAGATTCTGCATCAT 59.897 45.455 21.68 0.00 33.75 2.45
2622 2649 2.221286 GCACTCGAGATTCTGCATCATG 59.779 50.000 21.68 3.00 33.75 3.07
2641 2668 4.784838 TCATGGGAATAGGGTATGAGATGG 59.215 45.833 0.00 0.00 0.00 3.51
2687 2714 8.738645 ACTATGGGTTAAGATTTAGCTTCAAG 57.261 34.615 0.00 0.00 0.00 3.02
2738 2769 7.448748 TTGATTTAAGTTAGTTGGAGGCTTC 57.551 36.000 0.00 0.00 0.00 3.86
2739 2770 5.642063 TGATTTAAGTTAGTTGGAGGCTTCG 59.358 40.000 0.00 0.00 0.00 3.79
2751 2782 0.326264 AGGCTTCGCTTGGAACAGAT 59.674 50.000 0.00 0.00 42.39 2.90
2758 2789 1.128692 CGCTTGGAACAGATTTCGTCC 59.871 52.381 0.00 0.00 42.39 4.79
2860 2893 2.162809 TCATTCATATGCATCATGGCGC 59.837 45.455 0.19 0.00 36.28 6.53
2869 2902 1.835121 CATCATGGCGCAAATGACAG 58.165 50.000 22.62 15.89 36.89 3.51
2873 2906 1.133598 CATGGCGCAAATGACAGATGT 59.866 47.619 10.83 0.00 0.00 3.06
2906 2939 2.046314 TTGCTAAGCTGCCGGGAC 60.046 61.111 2.18 0.00 0.00 4.46
2916 2949 1.132453 GCTGCCGGGACTTACAAATTC 59.868 52.381 2.18 0.00 0.00 2.17
2983 3016 2.304761 CAGTAACTGGCCTACCTTTCCA 59.695 50.000 3.32 0.00 36.63 3.53
3001 3034 7.394923 ACCTTTCCACAAATATTTATCAACGGA 59.605 33.333 0.00 0.00 0.00 4.69
3055 3088 1.588082 GCACCAGGCAAGTGAATGG 59.412 57.895 10.68 0.00 43.97 3.16
3056 3089 0.895100 GCACCAGGCAAGTGAATGGA 60.895 55.000 10.68 0.00 43.97 3.41
3057 3090 1.843368 CACCAGGCAAGTGAATGGAT 58.157 50.000 8.68 0.00 37.42 3.41
3058 3091 1.747355 CACCAGGCAAGTGAATGGATC 59.253 52.381 8.68 0.00 37.42 3.36
3059 3092 1.355381 ACCAGGCAAGTGAATGGATCA 59.645 47.619 8.68 0.00 36.62 2.92
3060 3093 2.024655 ACCAGGCAAGTGAATGGATCAT 60.025 45.455 8.68 0.00 40.97 2.45
3061 3094 2.621998 CCAGGCAAGTGAATGGATCATC 59.378 50.000 0.00 0.00 40.97 2.92
3062 3095 3.284617 CAGGCAAGTGAATGGATCATCA 58.715 45.455 0.00 0.00 40.97 3.07
3063 3096 3.066342 CAGGCAAGTGAATGGATCATCAC 59.934 47.826 14.33 14.33 40.97 3.06
3064 3097 3.053842 AGGCAAGTGAATGGATCATCACT 60.054 43.478 17.45 17.45 44.25 3.41
3065 3098 4.164796 AGGCAAGTGAATGGATCATCACTA 59.835 41.667 21.25 0.00 41.90 2.74
3066 3099 5.068636 GGCAAGTGAATGGATCATCACTAT 58.931 41.667 21.25 12.68 41.90 2.12
3067 3100 5.533903 GGCAAGTGAATGGATCATCACTATT 59.466 40.000 21.25 9.77 41.90 1.73
3068 3101 6.712095 GGCAAGTGAATGGATCATCACTATTA 59.288 38.462 21.25 0.00 41.90 0.98
3069 3102 7.392673 GGCAAGTGAATGGATCATCACTATTAT 59.607 37.037 21.25 8.98 41.90 1.28
3070 3103 8.790718 GCAAGTGAATGGATCATCACTATTATT 58.209 33.333 21.25 8.71 41.90 1.40
3136 3169 3.895232 TCCAGCTGGTATCTTTCACTC 57.105 47.619 31.58 0.00 36.34 3.51
3138 3171 2.093973 CCAGCTGGTATCTTTCACTCGT 60.094 50.000 25.53 0.00 0.00 4.18
3155 3188 3.118738 ACTCGTTGGTTGACTTGTTCTCT 60.119 43.478 0.00 0.00 0.00 3.10
3156 3189 4.098960 ACTCGTTGGTTGACTTGTTCTCTA 59.901 41.667 0.00 0.00 0.00 2.43
3176 3209 9.520515 TTCTCTATAAATTTTCTGCAGAAAGGT 57.479 29.630 33.76 25.59 43.90 3.50
3270 3303 4.581824 AGTATGTTAGCATTTGCATGGAGG 59.418 41.667 5.20 0.00 45.16 4.30
3331 3364 3.916359 TCCTGTGGTGTTCTGTTGTTA 57.084 42.857 0.00 0.00 0.00 2.41
3431 3464 8.558700 GTTTCATGACAAATAAATGCCACTTTT 58.441 29.630 0.00 0.00 0.00 2.27
3497 3533 7.175990 TCGTTTGGATTCTATATATTTTGGGCC 59.824 37.037 0.00 0.00 0.00 5.80
3594 3756 9.400638 GTTAATTTTGTTTGTGTAATCATCCGA 57.599 29.630 0.00 0.00 0.00 4.55
3606 3768 1.520564 CATCCGATTCCACCGCGAA 60.521 57.895 8.23 0.00 0.00 4.70
3607 3769 1.087202 CATCCGATTCCACCGCGAAA 61.087 55.000 8.23 0.00 0.00 3.46
3713 3890 4.382685 CCCAAATCGAAGAGCAAGGTAGTA 60.383 45.833 0.00 0.00 43.63 1.82
3718 3895 5.401531 TCGAAGAGCAAGGTAGTAACAAT 57.598 39.130 0.00 0.00 0.00 2.71
3719 3896 5.408356 TCGAAGAGCAAGGTAGTAACAATC 58.592 41.667 0.00 0.00 0.00 2.67
3720 3897 4.567159 CGAAGAGCAAGGTAGTAACAATCC 59.433 45.833 0.00 0.00 0.00 3.01
3722 3899 5.346181 AGAGCAAGGTAGTAACAATCCTC 57.654 43.478 0.00 0.00 0.00 3.71
3860 4117 8.443953 AAGGATCAACAACAATAGAGATAAGC 57.556 34.615 0.00 0.00 0.00 3.09
3861 4118 7.800092 AGGATCAACAACAATAGAGATAAGCT 58.200 34.615 0.00 0.00 0.00 3.74
3898 4155 7.041984 CCTTGAACTACCACTGAAGTCTAAAAC 60.042 40.741 0.00 0.00 0.00 2.43
3903 4160 7.107542 ACTACCACTGAAGTCTAAAACACAAA 58.892 34.615 0.00 0.00 0.00 2.83
3904 4161 6.827586 ACCACTGAAGTCTAAAACACAAAA 57.172 33.333 0.00 0.00 0.00 2.44
3905 4162 6.617879 ACCACTGAAGTCTAAAACACAAAAC 58.382 36.000 0.00 0.00 0.00 2.43
3906 4163 6.207810 ACCACTGAAGTCTAAAACACAAAACA 59.792 34.615 0.00 0.00 0.00 2.83
3907 4164 6.526674 CCACTGAAGTCTAAAACACAAAACAC 59.473 38.462 0.00 0.00 0.00 3.32
3910 4167 8.303876 ACTGAAGTCTAAAACACAAAACACAAT 58.696 29.630 0.00 0.00 0.00 2.71
3911 4168 8.682128 TGAAGTCTAAAACACAAAACACAATC 57.318 30.769 0.00 0.00 0.00 2.67
3912 4169 7.757624 TGAAGTCTAAAACACAAAACACAATCC 59.242 33.333 0.00 0.00 0.00 3.01
3913 4170 7.404671 AGTCTAAAACACAAAACACAATCCT 57.595 32.000 0.00 0.00 0.00 3.24
3915 4172 7.122055 AGTCTAAAACACAAAACACAATCCTGA 59.878 33.333 0.00 0.00 0.00 3.86
3916 4173 7.757624 GTCTAAAACACAAAACACAATCCTGAA 59.242 33.333 0.00 0.00 0.00 3.02
3917 4174 6.720012 AAAACACAAAACACAATCCTGAAC 57.280 33.333 0.00 0.00 0.00 3.18
3918 4175 5.659440 AACACAAAACACAATCCTGAACT 57.341 34.783 0.00 0.00 0.00 3.01
3919 4176 6.767524 AACACAAAACACAATCCTGAACTA 57.232 33.333 0.00 0.00 0.00 2.24
3920 4177 6.959639 ACACAAAACACAATCCTGAACTAT 57.040 33.333 0.00 0.00 0.00 2.12
3921 4178 6.738114 ACACAAAACACAATCCTGAACTATG 58.262 36.000 0.00 0.00 0.00 2.23
3922 4179 6.545666 ACACAAAACACAATCCTGAACTATGA 59.454 34.615 0.00 0.00 0.00 2.15
3926 4183 6.575162 AACACAATCCTGAACTATGAAACC 57.425 37.500 0.00 0.00 0.00 3.27
3935 4192 8.246430 TCCTGAACTATGAAACCGTCTAATAT 57.754 34.615 0.00 0.00 0.00 1.28
3946 4203 5.786264 ACCGTCTAATATACAACCCTCAG 57.214 43.478 0.00 0.00 0.00 3.35
3950 4207 5.921408 CGTCTAATATACAACCCTCAGCTTC 59.079 44.000 0.00 0.00 0.00 3.86
3959 4216 1.251251 CCCTCAGCTTCCAAAACCAG 58.749 55.000 0.00 0.00 0.00 4.00
3960 4217 1.251251 CCTCAGCTTCCAAAACCAGG 58.749 55.000 0.00 0.00 0.00 4.45
3961 4218 1.251251 CTCAGCTTCCAAAACCAGGG 58.749 55.000 0.00 0.00 0.00 4.45
3962 4219 0.555769 TCAGCTTCCAAAACCAGGGT 59.444 50.000 0.00 0.00 0.00 4.34
3963 4220 1.063266 TCAGCTTCCAAAACCAGGGTT 60.063 47.619 0.00 0.00 40.45 4.11
3964 4221 1.069049 CAGCTTCCAAAACCAGGGTTG 59.931 52.381 4.14 1.74 38.47 3.77
3974 4231 3.215671 CCAGGGTTGGTTTTGACCA 57.784 52.632 0.00 0.00 39.79 4.02
3975 4232 1.039856 CCAGGGTTGGTTTTGACCAG 58.960 55.000 0.00 0.00 41.35 4.00
3976 4233 1.687996 CCAGGGTTGGTTTTGACCAGT 60.688 52.381 0.00 0.00 41.35 4.00
3977 4234 1.681264 CAGGGTTGGTTTTGACCAGTC 59.319 52.381 0.00 0.00 41.35 3.51
3978 4235 1.286553 AGGGTTGGTTTTGACCAGTCA 59.713 47.619 0.00 0.00 41.35 3.41
3979 4236 2.104170 GGGTTGGTTTTGACCAGTCAA 58.896 47.619 9.12 9.12 46.72 3.18
3989 4246 4.585955 TTGACCAGTCAACAGACTAGTC 57.414 45.455 15.41 15.41 45.37 2.59
3990 4247 2.552743 TGACCAGTCAACAGACTAGTCG 59.447 50.000 17.07 13.93 46.94 4.18
3991 4248 1.887198 ACCAGTCAACAGACTAGTCGG 59.113 52.381 19.82 19.82 40.54 4.79
3992 4249 1.402984 CCAGTCAACAGACTAGTCGGC 60.403 57.143 21.11 7.40 40.54 5.54
3993 4250 0.522180 AGTCAACAGACTAGTCGGCG 59.478 55.000 21.11 13.42 40.71 6.46
3994 4251 1.071567 GTCAACAGACTAGTCGGCGC 61.072 60.000 21.11 0.00 34.09 6.53
3995 4252 1.805945 CAACAGACTAGTCGGCGCC 60.806 63.158 19.07 19.07 34.09 6.53
3996 4253 2.273179 AACAGACTAGTCGGCGCCA 61.273 57.895 28.98 11.20 34.09 5.69
3997 4254 1.812686 AACAGACTAGTCGGCGCCAA 61.813 55.000 28.98 4.39 34.09 4.52
3998 4255 1.517257 CAGACTAGTCGGCGCCAAG 60.517 63.158 28.98 19.28 34.09 3.61
3999 4256 1.977544 AGACTAGTCGGCGCCAAGT 60.978 57.895 28.98 22.41 34.09 3.16
4000 4257 1.080025 GACTAGTCGGCGCCAAGTT 60.080 57.895 28.98 11.15 0.00 2.66
4001 4258 1.352156 GACTAGTCGGCGCCAAGTTG 61.352 60.000 28.98 15.23 0.00 3.16
4002 4259 1.374252 CTAGTCGGCGCCAAGTTGT 60.374 57.895 28.98 6.60 0.00 3.32
4003 4260 0.108992 CTAGTCGGCGCCAAGTTGTA 60.109 55.000 28.98 7.47 0.00 2.41
4004 4261 0.388907 TAGTCGGCGCCAAGTTGTAC 60.389 55.000 28.98 11.73 0.00 2.90
4005 4262 2.735478 TCGGCGCCAAGTTGTACG 60.735 61.111 28.98 9.06 0.00 3.67
4009 4266 4.743558 CGCCAAGTTGTACGCATG 57.256 55.556 1.45 0.00 0.00 4.06
4010 4267 1.866237 CGCCAAGTTGTACGCATGT 59.134 52.632 1.45 0.00 0.00 3.21
4011 4268 0.179225 CGCCAAGTTGTACGCATGTC 60.179 55.000 1.45 0.00 0.00 3.06
4012 4269 0.871722 GCCAAGTTGTACGCATGTCA 59.128 50.000 1.45 0.00 0.00 3.58
4013 4270 1.399727 GCCAAGTTGTACGCATGTCAC 60.400 52.381 1.45 0.00 0.00 3.67
4014 4271 1.196808 CCAAGTTGTACGCATGTCACC 59.803 52.381 1.45 0.00 0.00 4.02
4015 4272 1.870402 CAAGTTGTACGCATGTCACCA 59.130 47.619 0.00 0.00 0.00 4.17
4016 4273 2.472695 AGTTGTACGCATGTCACCAT 57.527 45.000 0.00 0.00 0.00 3.55
4017 4274 2.346803 AGTTGTACGCATGTCACCATC 58.653 47.619 0.00 0.00 0.00 3.51
4018 4275 2.028112 AGTTGTACGCATGTCACCATCT 60.028 45.455 0.00 0.00 0.00 2.90
4019 4276 2.293677 TGTACGCATGTCACCATCTC 57.706 50.000 0.00 0.00 0.00 2.75
4020 4277 1.134818 TGTACGCATGTCACCATCTCC 60.135 52.381 0.00 0.00 0.00 3.71
4021 4278 1.137086 GTACGCATGTCACCATCTCCT 59.863 52.381 0.00 0.00 0.00 3.69
4022 4279 1.485124 ACGCATGTCACCATCTCCTA 58.515 50.000 0.00 0.00 0.00 2.94
4023 4280 1.831106 ACGCATGTCACCATCTCCTAA 59.169 47.619 0.00 0.00 0.00 2.69
4024 4281 2.236146 ACGCATGTCACCATCTCCTAAA 59.764 45.455 0.00 0.00 0.00 1.85
4025 4282 3.118261 ACGCATGTCACCATCTCCTAAAT 60.118 43.478 0.00 0.00 0.00 1.40
4026 4283 3.496130 CGCATGTCACCATCTCCTAAATC 59.504 47.826 0.00 0.00 0.00 2.17
4027 4284 4.712476 GCATGTCACCATCTCCTAAATCT 58.288 43.478 0.00 0.00 0.00 2.40
4028 4285 5.509670 CGCATGTCACCATCTCCTAAATCTA 60.510 44.000 0.00 0.00 0.00 1.98
4029 4286 6.291377 GCATGTCACCATCTCCTAAATCTAA 58.709 40.000 0.00 0.00 0.00 2.10
4030 4287 6.767902 GCATGTCACCATCTCCTAAATCTAAA 59.232 38.462 0.00 0.00 0.00 1.85
4031 4288 7.283127 GCATGTCACCATCTCCTAAATCTAAAA 59.717 37.037 0.00 0.00 0.00 1.52
4032 4289 9.347240 CATGTCACCATCTCCTAAATCTAAAAT 57.653 33.333 0.00 0.00 0.00 1.82
4033 4290 9.927081 ATGTCACCATCTCCTAAATCTAAAATT 57.073 29.630 0.00 0.00 0.00 1.82
4034 4291 9.753674 TGTCACCATCTCCTAAATCTAAAATTT 57.246 29.630 0.00 0.00 0.00 1.82
4036 4293 8.686334 TCACCATCTCCTAAATCTAAAATTTGC 58.314 33.333 0.00 0.00 0.00 3.68
4037 4294 8.689972 CACCATCTCCTAAATCTAAAATTTGCT 58.310 33.333 0.00 0.00 0.00 3.91
4038 4295 9.259832 ACCATCTCCTAAATCTAAAATTTGCTT 57.740 29.630 0.00 0.00 0.00 3.91
4039 4296 9.741647 CCATCTCCTAAATCTAAAATTTGCTTC 57.258 33.333 0.00 0.00 0.00 3.86
4058 4315 8.463930 TTGCTTCTATTATTTTATCCAGTGGG 57.536 34.615 9.92 0.00 0.00 4.61
4059 4316 6.490040 TGCTTCTATTATTTTATCCAGTGGGC 59.510 38.462 9.92 0.00 0.00 5.36
4060 4317 6.490040 GCTTCTATTATTTTATCCAGTGGGCA 59.510 38.462 9.92 0.00 0.00 5.36
4061 4318 7.177392 GCTTCTATTATTTTATCCAGTGGGCAT 59.823 37.037 9.92 0.00 0.00 4.40
4062 4319 9.739276 CTTCTATTATTTTATCCAGTGGGCATA 57.261 33.333 9.92 0.00 0.00 3.14
4064 4321 9.515226 TCTATTATTTTATCCAGTGGGCATAAC 57.485 33.333 9.92 0.00 0.00 1.89
4065 4322 9.520515 CTATTATTTTATCCAGTGGGCATAACT 57.479 33.333 9.92 0.66 0.00 2.24
4066 4323 8.782137 ATTATTTTATCCAGTGGGCATAACTT 57.218 30.769 9.92 0.50 0.00 2.66
4067 4324 6.715347 ATTTTATCCAGTGGGCATAACTTC 57.285 37.500 9.92 0.00 0.00 3.01
4068 4325 5.450818 TTTATCCAGTGGGCATAACTTCT 57.549 39.130 9.92 0.00 0.00 2.85
4069 4326 5.450818 TTATCCAGTGGGCATAACTTCTT 57.549 39.130 9.92 0.00 0.00 2.52
4070 4327 3.071874 TCCAGTGGGCATAACTTCTTG 57.928 47.619 9.92 0.00 0.00 3.02
4071 4328 2.642311 TCCAGTGGGCATAACTTCTTGA 59.358 45.455 9.92 0.00 0.00 3.02
4072 4329 3.073798 TCCAGTGGGCATAACTTCTTGAA 59.926 43.478 9.92 0.00 0.00 2.69
4073 4330 3.826157 CCAGTGGGCATAACTTCTTGAAA 59.174 43.478 0.00 0.00 0.00 2.69
4074 4331 4.321230 CCAGTGGGCATAACTTCTTGAAAC 60.321 45.833 0.00 0.00 0.00 2.78
4075 4332 4.520492 CAGTGGGCATAACTTCTTGAAACT 59.480 41.667 0.00 0.00 0.00 2.66
4076 4333 5.010012 CAGTGGGCATAACTTCTTGAAACTT 59.990 40.000 0.00 0.00 0.00 2.66
4077 4334 5.598417 AGTGGGCATAACTTCTTGAAACTTT 59.402 36.000 0.00 0.00 0.00 2.66
4078 4335 5.920840 GTGGGCATAACTTCTTGAAACTTTC 59.079 40.000 0.00 0.00 0.00 2.62
4079 4336 5.596361 TGGGCATAACTTCTTGAAACTTTCA 59.404 36.000 0.00 0.00 38.04 2.69
4080 4337 5.920840 GGGCATAACTTCTTGAAACTTTCAC 59.079 40.000 3.56 0.00 39.87 3.18
4081 4338 6.460953 GGGCATAACTTCTTGAAACTTTCACA 60.461 38.462 3.56 0.00 39.87 3.58
4082 4339 6.638468 GGCATAACTTCTTGAAACTTTCACAG 59.362 38.462 3.56 5.76 39.87 3.66
4083 4340 7.417612 GCATAACTTCTTGAAACTTTCACAGA 58.582 34.615 3.56 7.70 39.87 3.41
4084 4341 8.078596 GCATAACTTCTTGAAACTTTCACAGAT 58.921 33.333 3.56 0.00 39.87 2.90
4085 4342 9.956720 CATAACTTCTTGAAACTTTCACAGATT 57.043 29.630 3.56 6.02 39.87 2.40
4086 4343 9.956720 ATAACTTCTTGAAACTTTCACAGATTG 57.043 29.630 3.56 8.62 39.87 2.67
4087 4344 7.630242 ACTTCTTGAAACTTTCACAGATTGA 57.370 32.000 3.56 0.00 39.87 2.57
4088 4345 8.055279 ACTTCTTGAAACTTTCACAGATTGAA 57.945 30.769 3.56 2.77 42.83 2.69
4101 4358 8.477984 TTCACAGATTGAAAACTTTCTTTTGG 57.522 30.769 3.98 0.00 41.51 3.28
4102 4359 6.534793 TCACAGATTGAAAACTTTCTTTTGGC 59.465 34.615 3.98 0.00 38.02 4.52
4103 4360 5.817296 ACAGATTGAAAACTTTCTTTTGGCC 59.183 36.000 0.00 0.00 38.02 5.36
4104 4361 5.816777 CAGATTGAAAACTTTCTTTTGGCCA 59.183 36.000 0.00 0.00 38.02 5.36
4105 4362 6.315891 CAGATTGAAAACTTTCTTTTGGCCAA 59.684 34.615 16.05 16.05 38.02 4.52
4106 4363 6.883756 AGATTGAAAACTTTCTTTTGGCCAAA 59.116 30.769 27.13 27.13 38.02 3.28
4107 4364 6.884280 TTGAAAACTTTCTTTTGGCCAAAA 57.116 29.167 35.22 35.22 38.02 2.44
4108 4365 7.459795 TTGAAAACTTTCTTTTGGCCAAAAT 57.540 28.000 37.05 23.15 39.29 1.82
4109 4366 7.459795 TGAAAACTTTCTTTTGGCCAAAATT 57.540 28.000 37.05 27.43 39.29 1.82
4110 4367 7.890515 TGAAAACTTTCTTTTGGCCAAAATTT 58.109 26.923 37.05 31.13 39.29 1.82
4111 4368 7.811713 TGAAAACTTTCTTTTGGCCAAAATTTG 59.188 29.630 37.05 27.14 39.29 2.32
4112 4369 7.459795 AAACTTTCTTTTGGCCAAAATTTGA 57.540 28.000 37.05 28.68 39.29 2.69
4113 4370 7.459795 AACTTTCTTTTGGCCAAAATTTGAA 57.540 28.000 37.05 31.67 39.29 2.69
4114 4371 7.643569 ACTTTCTTTTGGCCAAAATTTGAAT 57.356 28.000 37.05 21.83 39.29 2.57
4115 4372 7.706159 ACTTTCTTTTGGCCAAAATTTGAATC 58.294 30.769 37.05 0.00 39.29 2.52
4116 4373 7.338957 ACTTTCTTTTGGCCAAAATTTGAATCA 59.661 29.630 37.05 22.61 39.29 2.57
4117 4374 7.636150 TTCTTTTGGCCAAAATTTGAATCAA 57.364 28.000 37.05 17.17 39.29 2.57
4118 4375 7.636150 TCTTTTGGCCAAAATTTGAATCAAA 57.364 28.000 37.05 15.82 39.29 2.69
4119 4376 8.059798 TCTTTTGGCCAAAATTTGAATCAAAA 57.940 26.923 37.05 15.63 39.29 2.44
4120 4377 8.526147 TCTTTTGGCCAAAATTTGAATCAAAAA 58.474 25.926 37.05 15.23 39.29 1.94
4121 4378 8.699283 TTTTGGCCAAAATTTGAATCAAAAAG 57.301 26.923 34.56 3.31 36.90 2.27
4122 4379 7.401955 TTGGCCAAAATTTGAATCAAAAAGT 57.598 28.000 17.98 0.00 36.90 2.66
4123 4380 7.025485 TGGCCAAAATTTGAATCAAAAAGTC 57.975 32.000 12.75 2.62 36.90 3.01
4124 4381 6.827762 TGGCCAAAATTTGAATCAAAAAGTCT 59.172 30.769 12.75 0.00 36.90 3.24
4125 4382 7.134163 GGCCAAAATTTGAATCAAAAAGTCTG 58.866 34.615 12.75 6.19 36.90 3.51
4126 4383 7.012232 GGCCAAAATTTGAATCAAAAAGTCTGA 59.988 33.333 12.75 0.00 36.90 3.27
4127 4384 8.397148 GCCAAAATTTGAATCAAAAAGTCTGAA 58.603 29.630 12.75 0.00 36.90 3.02
4142 4399 9.992910 AAAAAGTCTGAATTTGAATTTTTGCTC 57.007 25.926 21.21 0.00 44.43 4.26
4143 4400 8.953368 AAAGTCTGAATTTGAATTTTTGCTCT 57.047 26.923 1.88 0.00 29.14 4.09
4145 4402 9.688592 AAGTCTGAATTTGAATTTTTGCTCTAG 57.311 29.630 0.00 0.00 0.00 2.43
4146 4403 7.811713 AGTCTGAATTTGAATTTTTGCTCTAGC 59.188 33.333 0.00 0.00 42.50 3.42
4147 4404 7.811713 GTCTGAATTTGAATTTTTGCTCTAGCT 59.188 33.333 3.26 0.00 42.66 3.32
4148 4405 8.362639 TCTGAATTTGAATTTTTGCTCTAGCTT 58.637 29.630 3.26 0.00 42.66 3.74
4149 4406 8.891671 TGAATTTGAATTTTTGCTCTAGCTTT 57.108 26.923 3.26 0.00 42.66 3.51
4150 4407 9.328845 TGAATTTGAATTTTTGCTCTAGCTTTT 57.671 25.926 3.26 0.00 42.66 2.27
4183 4440 5.243426 TGGCAACACTTGTTAAGACTTTC 57.757 39.130 0.00 0.00 46.17 2.62
4184 4441 4.097286 TGGCAACACTTGTTAAGACTTTCC 59.903 41.667 0.00 0.00 46.17 3.13
4185 4442 4.499188 GGCAACACTTGTTAAGACTTTCCC 60.499 45.833 0.00 0.00 36.32 3.97
4186 4443 4.097286 GCAACACTTGTTAAGACTTTCCCA 59.903 41.667 0.00 0.00 36.32 4.37
4187 4444 5.733373 GCAACACTTGTTAAGACTTTCCCAG 60.733 44.000 0.00 0.00 36.32 4.45
4188 4445 5.367945 ACACTTGTTAAGACTTTCCCAGA 57.632 39.130 0.00 0.00 0.00 3.86
4189 4446 5.941788 ACACTTGTTAAGACTTTCCCAGAT 58.058 37.500 0.00 0.00 0.00 2.90
4190 4447 6.365520 ACACTTGTTAAGACTTTCCCAGATT 58.634 36.000 0.00 0.00 0.00 2.40
4191 4448 6.263168 ACACTTGTTAAGACTTTCCCAGATTG 59.737 38.462 0.00 0.00 0.00 2.67
4192 4449 6.486657 CACTTGTTAAGACTTTCCCAGATTGA 59.513 38.462 0.00 0.00 0.00 2.57
4193 4450 7.013274 CACTTGTTAAGACTTTCCCAGATTGAA 59.987 37.037 0.00 0.00 0.00 2.69
4194 4451 7.725844 ACTTGTTAAGACTTTCCCAGATTGAAT 59.274 33.333 0.00 0.00 0.00 2.57
4195 4452 9.231297 CTTGTTAAGACTTTCCCAGATTGAATA 57.769 33.333 0.00 0.00 0.00 1.75
4196 4453 8.561738 TGTTAAGACTTTCCCAGATTGAATAC 57.438 34.615 0.00 0.00 0.00 1.89
4197 4454 8.160765 TGTTAAGACTTTCCCAGATTGAATACA 58.839 33.333 0.00 0.00 0.00 2.29
4198 4455 9.010029 GTTAAGACTTTCCCAGATTGAATACAA 57.990 33.333 0.00 0.00 40.42 2.41
4200 4457 7.636150 AGACTTTCCCAGATTGAATACAATG 57.364 36.000 0.00 0.00 45.30 2.82
4201 4458 6.604795 AGACTTTCCCAGATTGAATACAATGG 59.395 38.462 0.00 0.00 45.30 3.16
4202 4459 6.256053 ACTTTCCCAGATTGAATACAATGGT 58.744 36.000 0.00 0.00 45.30 3.55
4203 4460 6.725834 ACTTTCCCAGATTGAATACAATGGTT 59.274 34.615 0.00 0.00 45.30 3.67
4204 4461 6.528537 TTCCCAGATTGAATACAATGGTTG 57.471 37.500 0.00 0.00 45.30 3.77
4205 4462 5.579047 TCCCAGATTGAATACAATGGTTGT 58.421 37.500 0.00 0.67 45.30 3.32
4206 4463 5.418524 TCCCAGATTGAATACAATGGTTGTG 59.581 40.000 5.64 0.00 45.30 3.33
4207 4464 5.394443 CCCAGATTGAATACAATGGTTGTGG 60.394 44.000 5.64 0.00 45.30 4.17
4208 4465 5.418524 CCAGATTGAATACAATGGTTGTGGA 59.581 40.000 5.64 0.00 45.30 4.02
4209 4466 6.097270 CCAGATTGAATACAATGGTTGTGGAT 59.903 38.462 5.64 0.00 45.30 3.41
4210 4467 7.364056 CCAGATTGAATACAATGGTTGTGGATT 60.364 37.037 5.64 0.00 45.30 3.01
4211 4468 8.036575 CAGATTGAATACAATGGTTGTGGATTT 58.963 33.333 5.64 0.00 45.30 2.17
4212 4469 8.596293 AGATTGAATACAATGGTTGTGGATTTT 58.404 29.630 5.64 0.00 45.30 1.82
4213 4470 9.218440 GATTGAATACAATGGTTGTGGATTTTT 57.782 29.630 5.64 0.00 45.30 1.94
4214 4471 7.959689 TGAATACAATGGTTGTGGATTTTTG 57.040 32.000 5.64 0.00 45.03 2.44
4215 4472 7.730084 TGAATACAATGGTTGTGGATTTTTGA 58.270 30.769 5.64 0.00 45.03 2.69
4216 4473 7.871973 TGAATACAATGGTTGTGGATTTTTGAG 59.128 33.333 5.64 0.00 45.03 3.02
4217 4474 5.867903 ACAATGGTTGTGGATTTTTGAGA 57.132 34.783 0.00 0.00 43.48 3.27
4218 4475 6.232581 ACAATGGTTGTGGATTTTTGAGAA 57.767 33.333 0.00 0.00 43.48 2.87
4219 4476 6.829849 ACAATGGTTGTGGATTTTTGAGAAT 58.170 32.000 0.00 0.00 43.48 2.40
4220 4477 7.281841 ACAATGGTTGTGGATTTTTGAGAATT 58.718 30.769 0.00 0.00 43.48 2.17
4221 4478 7.774625 ACAATGGTTGTGGATTTTTGAGAATTT 59.225 29.630 0.00 0.00 43.48 1.82
4222 4479 8.623030 CAATGGTTGTGGATTTTTGAGAATTTT 58.377 29.630 0.00 0.00 0.00 1.82
4223 4480 8.750515 ATGGTTGTGGATTTTTGAGAATTTTT 57.249 26.923 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.017387 CATAGTTGAGGAAAGGCGGC 58.983 55.000 0.00 0.00 0.00 6.53
1 2 1.017387 GCATAGTTGAGGAAAGGCGG 58.983 55.000 0.00 0.00 0.00 6.13
2 3 1.017387 GGCATAGTTGAGGAAAGGCG 58.983 55.000 0.00 0.00 0.00 5.52
3 4 1.745653 GTGGCATAGTTGAGGAAAGGC 59.254 52.381 0.00 0.00 0.00 4.35
4 5 2.290896 TGGTGGCATAGTTGAGGAAAGG 60.291 50.000 0.00 0.00 0.00 3.11
5 6 2.749621 GTGGTGGCATAGTTGAGGAAAG 59.250 50.000 0.00 0.00 0.00 2.62
6 7 2.554344 GGTGGTGGCATAGTTGAGGAAA 60.554 50.000 0.00 0.00 0.00 3.13
7 8 1.004277 GGTGGTGGCATAGTTGAGGAA 59.996 52.381 0.00 0.00 0.00 3.36
8 9 0.618458 GGTGGTGGCATAGTTGAGGA 59.382 55.000 0.00 0.00 0.00 3.71
9 10 0.394352 GGGTGGTGGCATAGTTGAGG 60.394 60.000 0.00 0.00 0.00 3.86
10 11 0.327924 TGGGTGGTGGCATAGTTGAG 59.672 55.000 0.00 0.00 0.00 3.02
11 12 0.774276 TTGGGTGGTGGCATAGTTGA 59.226 50.000 0.00 0.00 0.00 3.18
12 13 1.851304 ATTGGGTGGTGGCATAGTTG 58.149 50.000 0.00 0.00 0.00 3.16
13 14 2.621556 AATTGGGTGGTGGCATAGTT 57.378 45.000 0.00 0.00 0.00 2.24
14 15 3.748645 TTAATTGGGTGGTGGCATAGT 57.251 42.857 0.00 0.00 0.00 2.12
15 16 5.413309 TTTTTAATTGGGTGGTGGCATAG 57.587 39.130 0.00 0.00 0.00 2.23
16 17 5.104735 GGATTTTTAATTGGGTGGTGGCATA 60.105 40.000 0.00 0.00 0.00 3.14
17 18 4.324176 GGATTTTTAATTGGGTGGTGGCAT 60.324 41.667 0.00 0.00 0.00 4.40
18 19 3.008485 GGATTTTTAATTGGGTGGTGGCA 59.992 43.478 0.00 0.00 0.00 4.92
19 20 3.605634 GGATTTTTAATTGGGTGGTGGC 58.394 45.455 0.00 0.00 0.00 5.01
20 21 3.584848 TGGGATTTTTAATTGGGTGGTGG 59.415 43.478 0.00 0.00 0.00 4.61
21 22 4.564613 GGTGGGATTTTTAATTGGGTGGTG 60.565 45.833 0.00 0.00 0.00 4.17
22 23 3.585289 GGTGGGATTTTTAATTGGGTGGT 59.415 43.478 0.00 0.00 0.00 4.16
23 24 3.054728 GGGTGGGATTTTTAATTGGGTGG 60.055 47.826 0.00 0.00 0.00 4.61
24 25 3.368948 CGGGTGGGATTTTTAATTGGGTG 60.369 47.826 0.00 0.00 0.00 4.61
25 26 2.835156 CGGGTGGGATTTTTAATTGGGT 59.165 45.455 0.00 0.00 0.00 4.51
26 27 2.419436 GCGGGTGGGATTTTTAATTGGG 60.419 50.000 0.00 0.00 0.00 4.12
27 28 2.499693 AGCGGGTGGGATTTTTAATTGG 59.500 45.455 0.00 0.00 0.00 3.16
28 29 3.520569 CAGCGGGTGGGATTTTTAATTG 58.479 45.455 0.00 0.00 0.00 2.32
29 30 2.093711 GCAGCGGGTGGGATTTTTAATT 60.094 45.455 9.49 0.00 0.00 1.40
30 31 1.480545 GCAGCGGGTGGGATTTTTAAT 59.519 47.619 9.49 0.00 0.00 1.40
31 32 0.892063 GCAGCGGGTGGGATTTTTAA 59.108 50.000 9.49 0.00 0.00 1.52
32 33 0.968393 GGCAGCGGGTGGGATTTTTA 60.968 55.000 9.49 0.00 0.00 1.52
33 34 2.282783 GGCAGCGGGTGGGATTTTT 61.283 57.895 9.49 0.00 0.00 1.94
34 35 2.679996 GGCAGCGGGTGGGATTTT 60.680 61.111 9.49 0.00 0.00 1.82
52 53 3.551890 TCTCGAATGAAAATAGCGACAGC 59.448 43.478 0.00 0.00 45.58 4.40
53 54 4.317698 GCTCTCGAATGAAAATAGCGACAG 60.318 45.833 0.00 0.00 0.00 3.51
54 55 3.551890 GCTCTCGAATGAAAATAGCGACA 59.448 43.478 0.00 0.00 0.00 4.35
55 56 4.108886 GCTCTCGAATGAAAATAGCGAC 57.891 45.455 0.00 0.00 0.00 5.19
57 58 3.147104 CGCTCTCGAATGAAAATAGCG 57.853 47.619 0.00 0.00 44.22 4.26
58 59 3.362499 GCTCGCTCTCGAATGAAAATAGC 60.362 47.826 0.00 0.00 44.98 2.97
59 60 3.798878 TGCTCGCTCTCGAATGAAAATAG 59.201 43.478 0.00 0.00 44.98 1.73
60 61 3.780902 TGCTCGCTCTCGAATGAAAATA 58.219 40.909 0.00 0.00 44.98 1.40
61 62 2.606725 CTGCTCGCTCTCGAATGAAAAT 59.393 45.455 0.00 0.00 44.98 1.82
62 63 1.995484 CTGCTCGCTCTCGAATGAAAA 59.005 47.619 0.00 0.00 44.98 2.29
63 64 1.633561 CTGCTCGCTCTCGAATGAAA 58.366 50.000 0.00 0.00 44.98 2.69
64 65 0.179127 CCTGCTCGCTCTCGAATGAA 60.179 55.000 0.00 0.00 44.98 2.57
65 66 1.435105 CCTGCTCGCTCTCGAATGA 59.565 57.895 0.00 0.00 44.98 2.57
66 67 1.591059 CCCTGCTCGCTCTCGAATG 60.591 63.158 0.00 0.00 44.98 2.67
67 68 2.811101 CCCTGCTCGCTCTCGAAT 59.189 61.111 0.00 0.00 44.98 3.34
68 69 4.135153 GCCCTGCTCGCTCTCGAA 62.135 66.667 0.00 0.00 44.98 3.71
76 77 2.016393 TAATCCTCACGCCCTGCTCG 62.016 60.000 0.00 0.00 0.00 5.03
77 78 0.394565 ATAATCCTCACGCCCTGCTC 59.605 55.000 0.00 0.00 0.00 4.26
78 79 0.107456 CATAATCCTCACGCCCTGCT 59.893 55.000 0.00 0.00 0.00 4.24
79 80 0.179045 ACATAATCCTCACGCCCTGC 60.179 55.000 0.00 0.00 0.00 4.85
80 81 2.213499 GAACATAATCCTCACGCCCTG 58.787 52.381 0.00 0.00 0.00 4.45
81 82 1.837439 TGAACATAATCCTCACGCCCT 59.163 47.619 0.00 0.00 0.00 5.19
82 83 2.213499 CTGAACATAATCCTCACGCCC 58.787 52.381 0.00 0.00 0.00 6.13
83 84 2.158957 TCCTGAACATAATCCTCACGCC 60.159 50.000 0.00 0.00 0.00 5.68
84 85 3.126831 CTCCTGAACATAATCCTCACGC 58.873 50.000 0.00 0.00 0.00 5.34
85 86 3.133003 ACCTCCTGAACATAATCCTCACG 59.867 47.826 0.00 0.00 0.00 4.35
86 87 4.446371 CACCTCCTGAACATAATCCTCAC 58.554 47.826 0.00 0.00 0.00 3.51
87 88 3.455910 CCACCTCCTGAACATAATCCTCA 59.544 47.826 0.00 0.00 0.00 3.86
88 89 3.181450 CCCACCTCCTGAACATAATCCTC 60.181 52.174 0.00 0.00 0.00 3.71
89 90 2.780010 CCCACCTCCTGAACATAATCCT 59.220 50.000 0.00 0.00 0.00 3.24
90 91 2.777692 TCCCACCTCCTGAACATAATCC 59.222 50.000 0.00 0.00 0.00 3.01
91 92 3.456277 ACTCCCACCTCCTGAACATAATC 59.544 47.826 0.00 0.00 0.00 1.75
92 93 3.464828 ACTCCCACCTCCTGAACATAAT 58.535 45.455 0.00 0.00 0.00 1.28
93 94 2.915869 ACTCCCACCTCCTGAACATAA 58.084 47.619 0.00 0.00 0.00 1.90
94 95 2.571653 CAACTCCCACCTCCTGAACATA 59.428 50.000 0.00 0.00 0.00 2.29
95 96 1.352352 CAACTCCCACCTCCTGAACAT 59.648 52.381 0.00 0.00 0.00 2.71
96 97 0.764890 CAACTCCCACCTCCTGAACA 59.235 55.000 0.00 0.00 0.00 3.18
97 98 0.036875 CCAACTCCCACCTCCTGAAC 59.963 60.000 0.00 0.00 0.00 3.18
98 99 1.133809 CCCAACTCCCACCTCCTGAA 61.134 60.000 0.00 0.00 0.00 3.02
99 100 1.538876 CCCAACTCCCACCTCCTGA 60.539 63.158 0.00 0.00 0.00 3.86
100 101 2.606587 CCCCAACTCCCACCTCCTG 61.607 68.421 0.00 0.00 0.00 3.86
101 102 2.204151 CCCCAACTCCCACCTCCT 60.204 66.667 0.00 0.00 0.00 3.69
102 103 1.432023 TTTCCCCAACTCCCACCTCC 61.432 60.000 0.00 0.00 0.00 4.30
103 104 0.251209 GTTTCCCCAACTCCCACCTC 60.251 60.000 0.00 0.00 31.92 3.85
104 105 1.726192 GGTTTCCCCAACTCCCACCT 61.726 60.000 0.00 0.00 35.46 4.00
105 106 1.228769 GGTTTCCCCAACTCCCACC 60.229 63.158 0.00 0.00 35.46 4.61
106 107 1.602605 CGGTTTCCCCAACTCCCAC 60.603 63.158 0.00 0.00 35.46 4.61
107 108 1.647334 AACGGTTTCCCCAACTCCCA 61.647 55.000 0.00 0.00 35.46 4.37
108 109 0.468585 AAACGGTTTCCCCAACTCCC 60.469 55.000 0.00 0.00 35.46 4.30
109 110 0.956633 GAAACGGTTTCCCCAACTCC 59.043 55.000 20.30 0.00 35.46 3.85
110 111 1.607148 CTGAAACGGTTTCCCCAACTC 59.393 52.381 25.99 4.81 38.90 3.01
111 112 1.687563 CTGAAACGGTTTCCCCAACT 58.312 50.000 25.99 0.00 38.90 3.16
112 113 0.031585 GCTGAAACGGTTTCCCCAAC 59.968 55.000 25.99 10.64 38.90 3.77
113 114 1.448922 CGCTGAAACGGTTTCCCCAA 61.449 55.000 25.99 10.35 38.90 4.12
114 115 1.894756 CGCTGAAACGGTTTCCCCA 60.895 57.895 25.99 11.22 38.90 4.96
115 116 1.598685 TCGCTGAAACGGTTTCCCC 60.599 57.895 25.99 17.10 38.90 4.81
116 117 1.572941 GTCGCTGAAACGGTTTCCC 59.427 57.895 25.99 17.39 38.90 3.97
117 118 1.203313 CGTCGCTGAAACGGTTTCC 59.797 57.895 25.99 13.60 38.90 3.13
118 119 0.161024 CTCGTCGCTGAAACGGTTTC 59.839 55.000 23.27 23.27 40.45 2.78
119 120 0.249155 TCTCGTCGCTGAAACGGTTT 60.249 50.000 5.68 5.68 40.45 3.27
120 121 0.249155 TTCTCGTCGCTGAAACGGTT 60.249 50.000 0.00 0.00 40.45 4.44
121 122 0.938168 GTTCTCGTCGCTGAAACGGT 60.938 55.000 2.87 0.00 40.45 4.83
122 123 1.773496 GTTCTCGTCGCTGAAACGG 59.227 57.895 2.87 0.00 40.45 4.44
123 124 1.407329 CGTTCTCGTCGCTGAAACG 59.593 57.895 2.87 4.99 41.39 3.60
131 132 2.870161 CCACTCGCGTTCTCGTCG 60.870 66.667 5.77 0.00 39.49 5.12
132 133 3.173240 GCCACTCGCGTTCTCGTC 61.173 66.667 5.77 0.00 39.49 4.20
133 134 3.671411 AGCCACTCGCGTTCTCGT 61.671 61.111 5.77 0.00 44.76 4.18
134 135 3.175240 CAGCCACTCGCGTTCTCG 61.175 66.667 5.77 0.00 44.76 4.04
135 136 3.482783 GCAGCCACTCGCGTTCTC 61.483 66.667 5.77 0.00 44.76 2.87
143 144 4.459089 GGACGAGGGCAGCCACTC 62.459 72.222 15.19 15.89 0.00 3.51
148 149 4.803426 CTCACGGACGAGGGCAGC 62.803 72.222 0.00 0.00 0.00 5.25
149 150 2.549611 CTTCTCACGGACGAGGGCAG 62.550 65.000 0.00 0.00 33.59 4.85
150 151 2.599281 TTCTCACGGACGAGGGCA 60.599 61.111 0.00 0.00 33.59 5.36
151 152 1.874345 TTCTTCTCACGGACGAGGGC 61.874 60.000 0.00 0.00 33.59 5.19
152 153 0.818296 ATTCTTCTCACGGACGAGGG 59.182 55.000 0.00 0.00 33.59 4.30
153 154 3.315470 TCATATTCTTCTCACGGACGAGG 59.685 47.826 0.00 0.00 33.59 4.63
154 155 4.283678 GTCATATTCTTCTCACGGACGAG 58.716 47.826 0.00 0.00 0.00 4.18
155 156 3.242641 CGTCATATTCTTCTCACGGACGA 60.243 47.826 0.00 0.00 46.89 4.20
156 157 3.036633 CGTCATATTCTTCTCACGGACG 58.963 50.000 0.00 0.00 40.45 4.79
160 161 3.046390 GAGCCGTCATATTCTTCTCACG 58.954 50.000 0.00 0.00 0.00 4.35
161 162 4.295051 GAGAGCCGTCATATTCTTCTCAC 58.705 47.826 0.00 0.00 0.00 3.51
162 163 3.003793 CGAGAGCCGTCATATTCTTCTCA 59.996 47.826 0.00 0.00 0.00 3.27
163 164 3.560503 CGAGAGCCGTCATATTCTTCTC 58.439 50.000 0.00 0.00 0.00 2.87
164 165 3.634568 CGAGAGCCGTCATATTCTTCT 57.365 47.619 0.00 0.00 0.00 2.85
176 177 2.125912 CCTGGTTGACGAGAGCCG 60.126 66.667 0.00 0.00 45.44 5.52
177 178 0.250338 AAACCTGGTTGACGAGAGCC 60.250 55.000 13.79 0.00 0.00 4.70
178 179 1.594331 AAAACCTGGTTGACGAGAGC 58.406 50.000 13.79 0.00 0.00 4.09
179 180 3.493503 GTGTAAAACCTGGTTGACGAGAG 59.506 47.826 13.79 0.00 0.00 3.20
180 181 3.460103 GTGTAAAACCTGGTTGACGAGA 58.540 45.455 13.79 0.00 0.00 4.04
181 182 2.546789 GGTGTAAAACCTGGTTGACGAG 59.453 50.000 13.79 0.00 46.55 4.18
182 183 2.563702 GGTGTAAAACCTGGTTGACGA 58.436 47.619 13.79 3.47 46.55 4.20
192 193 8.938906 TGTTTAGAGAATATTCGGTGTAAAACC 58.061 33.333 9.78 0.79 46.60 3.27
195 196 9.104965 CCATGTTTAGAGAATATTCGGTGTAAA 57.895 33.333 9.78 6.42 0.00 2.01
196 197 7.225931 GCCATGTTTAGAGAATATTCGGTGTAA 59.774 37.037 9.78 0.74 0.00 2.41
197 198 6.704493 GCCATGTTTAGAGAATATTCGGTGTA 59.296 38.462 9.78 0.00 0.00 2.90
198 199 5.527582 GCCATGTTTAGAGAATATTCGGTGT 59.472 40.000 9.78 0.00 0.00 4.16
199 200 5.760253 AGCCATGTTTAGAGAATATTCGGTG 59.240 40.000 9.78 2.31 0.00 4.94
200 201 5.760253 CAGCCATGTTTAGAGAATATTCGGT 59.240 40.000 9.78 4.09 0.00 4.69
201 202 5.334414 GCAGCCATGTTTAGAGAATATTCGG 60.334 44.000 9.78 3.27 0.00 4.30
202 203 5.468072 AGCAGCCATGTTTAGAGAATATTCG 59.532 40.000 9.78 0.00 0.00 3.34
203 204 6.484643 TGAGCAGCCATGTTTAGAGAATATTC 59.515 38.462 7.41 7.41 0.00 1.75
204 205 6.359804 TGAGCAGCCATGTTTAGAGAATATT 58.640 36.000 0.00 0.00 0.00 1.28
205 206 5.933617 TGAGCAGCCATGTTTAGAGAATAT 58.066 37.500 0.00 0.00 0.00 1.28
206 207 5.357742 TGAGCAGCCATGTTTAGAGAATA 57.642 39.130 0.00 0.00 0.00 1.75
207 208 4.226427 TGAGCAGCCATGTTTAGAGAAT 57.774 40.909 0.00 0.00 0.00 2.40
208 209 3.701205 TGAGCAGCCATGTTTAGAGAA 57.299 42.857 0.00 0.00 0.00 2.87
209 210 3.920231 ATGAGCAGCCATGTTTAGAGA 57.080 42.857 0.00 0.00 0.00 3.10
210 211 4.694509 GGATATGAGCAGCCATGTTTAGAG 59.305 45.833 6.63 0.00 0.00 2.43
211 212 4.102996 TGGATATGAGCAGCCATGTTTAGA 59.897 41.667 6.63 0.00 0.00 2.10
212 213 4.214971 GTGGATATGAGCAGCCATGTTTAG 59.785 45.833 6.63 0.00 32.26 1.85
213 214 4.136796 GTGGATATGAGCAGCCATGTTTA 58.863 43.478 6.63 0.00 32.26 2.01
214 215 2.954318 GTGGATATGAGCAGCCATGTTT 59.046 45.455 6.63 0.00 32.26 2.83
215 216 2.579873 GTGGATATGAGCAGCCATGTT 58.420 47.619 6.63 0.00 32.26 2.71
216 217 1.541889 CGTGGATATGAGCAGCCATGT 60.542 52.381 6.63 0.78 33.72 3.21
217 218 1.154197 CGTGGATATGAGCAGCCATG 58.846 55.000 6.63 0.00 32.26 3.66
218 219 0.035881 CCGTGGATATGAGCAGCCAT 59.964 55.000 0.00 0.00 32.26 4.40
219 220 1.337384 ACCGTGGATATGAGCAGCCA 61.337 55.000 0.00 0.00 0.00 4.75
220 221 0.679505 TACCGTGGATATGAGCAGCC 59.320 55.000 0.00 0.00 0.00 4.85
221 222 2.611518 GATACCGTGGATATGAGCAGC 58.388 52.381 0.00 0.00 0.00 5.25
222 223 2.828520 AGGATACCGTGGATATGAGCAG 59.171 50.000 0.00 0.00 37.17 4.24
223 224 2.826128 GAGGATACCGTGGATATGAGCA 59.174 50.000 0.00 0.00 37.17 4.26
224 225 3.093057 AGAGGATACCGTGGATATGAGC 58.907 50.000 0.00 0.00 37.17 4.26
225 226 4.594970 AGAGAGGATACCGTGGATATGAG 58.405 47.826 0.00 0.00 37.17 2.90
226 227 4.659529 AGAGAGGATACCGTGGATATGA 57.340 45.455 0.00 0.00 37.17 2.15
227 228 5.243954 TGAAAGAGAGGATACCGTGGATATG 59.756 44.000 0.00 0.00 37.17 1.78
228 229 5.394738 TGAAAGAGAGGATACCGTGGATAT 58.605 41.667 0.00 0.00 37.17 1.63
229 230 4.800023 TGAAAGAGAGGATACCGTGGATA 58.200 43.478 0.00 0.00 37.17 2.59
230 231 3.643237 TGAAAGAGAGGATACCGTGGAT 58.357 45.455 0.00 0.00 37.17 3.41
231 232 3.095912 TGAAAGAGAGGATACCGTGGA 57.904 47.619 0.00 0.00 37.17 4.02
232 233 3.887621 TTGAAAGAGAGGATACCGTGG 57.112 47.619 0.00 0.00 37.17 4.94
233 234 3.612860 CGTTTGAAAGAGAGGATACCGTG 59.387 47.826 0.00 0.00 37.17 4.94
234 235 3.368116 CCGTTTGAAAGAGAGGATACCGT 60.368 47.826 0.00 0.00 37.17 4.83
235 236 3.187700 CCGTTTGAAAGAGAGGATACCG 58.812 50.000 0.00 0.00 37.17 4.02
236 237 2.937149 GCCGTTTGAAAGAGAGGATACC 59.063 50.000 0.00 0.00 37.17 2.73
237 238 3.619038 CAGCCGTTTGAAAGAGAGGATAC 59.381 47.826 0.00 0.00 0.00 2.24
238 239 3.369471 CCAGCCGTTTGAAAGAGAGGATA 60.369 47.826 0.00 0.00 0.00 2.59
239 240 2.616510 CCAGCCGTTTGAAAGAGAGGAT 60.617 50.000 0.00 0.00 0.00 3.24
240 241 1.270839 CCAGCCGTTTGAAAGAGAGGA 60.271 52.381 0.00 0.00 0.00 3.71
241 242 1.160137 CCAGCCGTTTGAAAGAGAGG 58.840 55.000 0.00 0.00 0.00 3.69
242 243 1.884235 ACCAGCCGTTTGAAAGAGAG 58.116 50.000 0.00 0.00 0.00 3.20
243 244 3.007506 TGATACCAGCCGTTTGAAAGAGA 59.992 43.478 0.00 0.00 0.00 3.10
244 245 3.334691 TGATACCAGCCGTTTGAAAGAG 58.665 45.455 0.00 0.00 0.00 2.85
245 246 3.410631 TGATACCAGCCGTTTGAAAGA 57.589 42.857 0.00 0.00 0.00 2.52
246 247 3.065371 GGATGATACCAGCCGTTTGAAAG 59.935 47.826 0.00 0.00 39.28 2.62
247 248 3.013921 GGATGATACCAGCCGTTTGAAA 58.986 45.455 0.00 0.00 39.28 2.69
248 249 2.639065 GGATGATACCAGCCGTTTGAA 58.361 47.619 0.00 0.00 39.28 2.69
249 250 2.325583 GGATGATACCAGCCGTTTGA 57.674 50.000 0.00 0.00 39.28 2.69
256 257 6.183347 AGCCATATTTTAGGATGATACCAGC 58.817 40.000 0.00 0.00 0.00 4.85
257 258 9.553064 GATAGCCATATTTTAGGATGATACCAG 57.447 37.037 0.00 0.00 0.00 4.00
258 259 8.494433 GGATAGCCATATTTTAGGATGATACCA 58.506 37.037 0.00 0.00 0.00 3.25
259 260 7.939588 GGGATAGCCATATTTTAGGATGATACC 59.060 40.741 0.00 0.00 35.15 2.73
260 261 8.718656 AGGGATAGCCATATTTTAGGATGATAC 58.281 37.037 0.00 0.00 35.15 2.24
261 262 8.876332 AGGGATAGCCATATTTTAGGATGATA 57.124 34.615 0.00 0.00 35.15 2.15
262 263 7.407033 TGAGGGATAGCCATATTTTAGGATGAT 59.593 37.037 0.00 0.00 35.15 2.45
263 264 6.735229 TGAGGGATAGCCATATTTTAGGATGA 59.265 38.462 0.00 0.00 35.15 2.92
264 265 6.962182 TGAGGGATAGCCATATTTTAGGATG 58.038 40.000 0.00 0.00 35.15 3.51
265 266 7.147230 GGATGAGGGATAGCCATATTTTAGGAT 60.147 40.741 0.00 0.00 35.15 3.24
266 267 6.158695 GGATGAGGGATAGCCATATTTTAGGA 59.841 42.308 0.00 0.00 35.15 2.94
267 268 6.069440 TGGATGAGGGATAGCCATATTTTAGG 60.069 42.308 0.00 0.00 35.15 2.69
268 269 6.825721 GTGGATGAGGGATAGCCATATTTTAG 59.174 42.308 0.00 0.00 35.84 1.85
269 270 6.297010 GGTGGATGAGGGATAGCCATATTTTA 60.297 42.308 0.00 0.00 35.84 1.52
270 271 5.517299 GGTGGATGAGGGATAGCCATATTTT 60.517 44.000 0.00 0.00 35.84 1.82
271 272 4.018050 GGTGGATGAGGGATAGCCATATTT 60.018 45.833 0.00 0.00 35.84 1.40
272 273 3.525199 GGTGGATGAGGGATAGCCATATT 59.475 47.826 0.00 0.00 35.84 1.28
273 274 3.118531 GGTGGATGAGGGATAGCCATAT 58.881 50.000 0.00 0.00 35.84 1.78
274 275 2.551270 GGTGGATGAGGGATAGCCATA 58.449 52.381 0.00 0.00 35.84 2.74
275 276 1.366319 GGTGGATGAGGGATAGCCAT 58.634 55.000 0.00 0.00 35.84 4.40
276 277 0.768221 GGGTGGATGAGGGATAGCCA 60.768 60.000 0.00 0.00 35.15 4.75
277 278 0.768221 TGGGTGGATGAGGGATAGCC 60.768 60.000 0.00 0.00 0.00 3.93
278 279 1.004044 CATGGGTGGATGAGGGATAGC 59.996 57.143 0.00 0.00 0.00 2.97
291 292 2.753043 GCTGGCTGTCCATGGGTG 60.753 66.667 13.02 3.52 42.51 4.61
292 293 2.370459 TTTGCTGGCTGTCCATGGGT 62.370 55.000 13.02 0.00 42.51 4.51
293 294 1.607178 TTTGCTGGCTGTCCATGGG 60.607 57.895 13.02 0.00 42.51 4.00
294 295 1.588082 GTTTGCTGGCTGTCCATGG 59.412 57.895 4.97 4.97 42.51 3.66
295 296 1.180456 TGGTTTGCTGGCTGTCCATG 61.180 55.000 0.00 0.00 42.51 3.66
296 297 0.469705 TTGGTTTGCTGGCTGTCCAT 60.470 50.000 0.00 0.00 42.51 3.41
297 298 0.685785 TTTGGTTTGCTGGCTGTCCA 60.686 50.000 0.00 0.00 40.85 4.02
298 299 0.249447 GTTTGGTTTGCTGGCTGTCC 60.249 55.000 0.00 0.00 0.00 4.02
299 300 0.594796 CGTTTGGTTTGCTGGCTGTC 60.595 55.000 0.00 0.00 0.00 3.51
300 301 1.437160 CGTTTGGTTTGCTGGCTGT 59.563 52.632 0.00 0.00 0.00 4.40
301 302 1.300080 CCGTTTGGTTTGCTGGCTG 60.300 57.895 0.00 0.00 0.00 4.85
302 303 3.128375 CCGTTTGGTTTGCTGGCT 58.872 55.556 0.00 0.00 0.00 4.75
303 304 2.661537 GCCGTTTGGTTTGCTGGC 60.662 61.111 0.00 0.00 37.67 4.85
304 305 2.028925 GGCCGTTTGGTTTGCTGG 59.971 61.111 0.00 0.00 37.67 4.85
305 306 2.028925 GGGCCGTTTGGTTTGCTG 59.971 61.111 0.00 0.00 37.67 4.41
306 307 3.230990 GGGGCCGTTTGGTTTGCT 61.231 61.111 0.00 0.00 37.67 3.91
307 308 4.308458 GGGGGCCGTTTGGTTTGC 62.308 66.667 0.00 0.00 37.67 3.68
308 309 2.376228 CTTGGGGGCCGTTTGGTTTG 62.376 60.000 0.00 0.00 37.67 2.93
309 310 2.041819 TTGGGGGCCGTTTGGTTT 60.042 55.556 0.00 0.00 37.67 3.27
310 311 2.523168 CTTGGGGGCCGTTTGGTT 60.523 61.111 0.00 0.00 37.67 3.67
311 312 3.802852 GACTTGGGGGCCGTTTGGT 62.803 63.158 0.00 0.00 37.67 3.67
312 313 2.989253 GACTTGGGGGCCGTTTGG 60.989 66.667 0.00 0.00 38.77 3.28
313 314 1.595093 GATGACTTGGGGGCCGTTTG 61.595 60.000 0.00 0.00 0.00 2.93
314 315 1.304134 GATGACTTGGGGGCCGTTT 60.304 57.895 0.00 0.00 0.00 3.60
315 316 1.863155 ATGATGACTTGGGGGCCGTT 61.863 55.000 0.00 0.00 0.00 4.44
316 317 2.270874 GATGATGACTTGGGGGCCGT 62.271 60.000 0.00 0.00 0.00 5.68
317 318 1.526917 GATGATGACTTGGGGGCCG 60.527 63.158 0.00 0.00 0.00 6.13
318 319 1.152673 GGATGATGACTTGGGGGCC 60.153 63.158 0.00 0.00 0.00 5.80
319 320 0.466922 CAGGATGATGACTTGGGGGC 60.467 60.000 0.00 0.00 39.69 5.80
320 321 1.216064 TCAGGATGATGACTTGGGGG 58.784 55.000 0.00 0.00 42.56 5.40
704 705 2.022195 CGGTTCGACTCCAATCTAGGA 58.978 52.381 6.63 0.00 36.00 2.94
705 706 1.749634 ACGGTTCGACTCCAATCTAGG 59.250 52.381 6.63 0.00 0.00 3.02
706 707 2.223525 GGACGGTTCGACTCCAATCTAG 60.224 54.545 6.63 0.00 0.00 2.43
844 851 0.809241 CCAGTGGAGAGAGATTGCGC 60.809 60.000 1.68 0.00 0.00 6.09
868 875 3.953712 TGAACGAAAGCTCATACCTCA 57.046 42.857 0.00 0.00 29.99 3.86
903 910 0.398098 TGGGGAGATCGGTAGGGTTC 60.398 60.000 0.00 0.00 0.00 3.62
988 996 3.443045 CGCCATGTTCCCCTGCAC 61.443 66.667 0.00 0.00 0.00 4.57
1091 1099 5.249420 GGGAAAAGCTCTGAACTATGAAGT 58.751 41.667 0.00 0.00 37.65 3.01
1092 1100 4.637977 GGGGAAAAGCTCTGAACTATGAAG 59.362 45.833 0.00 0.00 0.00 3.02
1103 1111 4.501400 CGAAAACAAATGGGGAAAAGCTCT 60.501 41.667 0.00 0.00 0.00 4.09
1120 1128 1.533731 TCGGACCAATTGAGCGAAAAC 59.466 47.619 7.12 0.00 0.00 2.43
1132 1140 0.679960 TCGATCAGAGCTCGGACCAA 60.680 55.000 19.14 4.38 36.78 3.67
1153 1161 5.951747 CCACAGGAATTTGAGGATTTTAGGA 59.048 40.000 0.00 0.00 31.30 2.94
1164 1172 2.697751 CCAACCAACCACAGGAATTTGA 59.302 45.455 0.00 0.00 0.00 2.69
1171 1179 2.917227 GCCCCAACCAACCACAGG 60.917 66.667 0.00 0.00 0.00 4.00
1176 1184 2.781431 CTACCAGGCCCCAACCAACC 62.781 65.000 0.00 0.00 0.00 3.77
1177 1185 1.304134 CTACCAGGCCCCAACCAAC 60.304 63.158 0.00 0.00 0.00 3.77
1178 1186 2.543797 CCTACCAGGCCCCAACCAA 61.544 63.158 0.00 0.00 0.00 3.67
1179 1187 2.938798 CCTACCAGGCCCCAACCA 60.939 66.667 0.00 0.00 0.00 3.67
1191 1201 2.543238 CGAGTGAACCGATTAGCCTACC 60.543 54.545 0.00 0.00 0.00 3.18
1195 1205 1.134560 AGACGAGTGAACCGATTAGCC 59.865 52.381 0.00 0.00 0.00 3.93
1332 1343 5.106594 CGGAGTCTCATCTCTAGACATGATG 60.107 48.000 10.67 11.51 44.77 3.07
1415 1426 1.274167 AGCACAAATGGTCATGGCAAG 59.726 47.619 0.00 0.00 0.00 4.01
1553 1564 0.108186 CACTCTCCATGCAGGCGTAA 60.108 55.000 0.00 0.00 37.29 3.18
1683 1694 9.088512 CAAGTCTAAGCTAAACTAACCATGTAG 57.911 37.037 0.00 0.00 0.00 2.74
1736 1748 6.995091 GGACAATAGATGACCAGAAGCTAAAT 59.005 38.462 0.00 0.00 42.57 1.40
1737 1749 6.156949 AGGACAATAGATGACCAGAAGCTAAA 59.843 38.462 0.00 0.00 45.05 1.85
1749 1761 6.149973 CACAGAGCAAAAAGGACAATAGATGA 59.850 38.462 0.00 0.00 0.00 2.92
1854 1874 6.195983 CGATAGAAACAATCTGATTTGCTTGC 59.804 38.462 0.00 0.00 39.30 4.01
1876 1897 6.037062 TGCGAACATGAGATCAAAATAACGAT 59.963 34.615 0.00 0.00 0.00 3.73
1878 1899 5.449113 GTGCGAACATGAGATCAAAATAACG 59.551 40.000 0.00 0.00 0.00 3.18
1881 1902 6.493449 TTGTGCGAACATGAGATCAAAATA 57.507 33.333 0.00 0.00 0.00 1.40
1940 1962 1.066071 TGGAAAGTTGGTCGTGACACA 60.066 47.619 6.37 0.00 0.00 3.72
1953 1975 4.170468 AGGTCATGAACTGTTGGAAAGT 57.830 40.909 13.83 0.00 0.00 2.66
2005 2027 2.993471 GCACTTGTGCCCCCATTCG 61.993 63.158 14.17 0.00 0.00 3.34
2036 2058 6.469782 TCTTGATGTGTATCAGTATCAGCA 57.530 37.500 0.00 0.00 43.76 4.41
2105 2127 6.038161 GTGTGCATATAAATACCTGAGCAACA 59.962 38.462 0.00 0.00 32.03 3.33
2163 2185 8.581057 TGTGATGCGTATTTTTGTTACATTTT 57.419 26.923 0.00 0.00 0.00 1.82
2205 2227 7.811236 ACAGCTGAAGAATATGACACAAAATTG 59.189 33.333 23.35 0.00 0.00 2.32
2209 2231 6.882610 AACAGCTGAAGAATATGACACAAA 57.117 33.333 23.35 0.00 0.00 2.83
2271 2293 8.260099 TCATGAAGATAATGACTGGATTCTCT 57.740 34.615 0.00 0.00 0.00 3.10
2328 2350 0.877071 CCTTAACTGCCAGTGCACTG 59.123 55.000 35.15 35.15 44.23 3.66
2379 2401 3.402110 CACAATTGACTGACAGCTGGTA 58.598 45.455 19.93 5.27 0.00 3.25
2556 2578 4.735369 TCCCTTTTTGAGGCAATTGTCTA 58.265 39.130 13.63 0.00 44.85 2.59
2597 2624 1.818674 TGCAGAATCTCGAGTGCTACA 59.181 47.619 21.81 12.06 36.84 2.74
2598 2625 2.568696 TGCAGAATCTCGAGTGCTAC 57.431 50.000 21.81 10.05 36.84 3.58
2599 2626 2.689983 TGATGCAGAATCTCGAGTGCTA 59.310 45.455 21.81 11.78 36.84 3.49
2600 2627 1.479730 TGATGCAGAATCTCGAGTGCT 59.520 47.619 21.81 11.58 36.84 4.40
2601 2628 1.931906 TGATGCAGAATCTCGAGTGC 58.068 50.000 16.48 16.48 36.15 4.40
2602 2629 2.801111 CCATGATGCAGAATCTCGAGTG 59.199 50.000 13.13 4.24 36.15 3.51
2603 2630 2.224233 CCCATGATGCAGAATCTCGAGT 60.224 50.000 13.13 0.00 36.15 4.18
2604 2631 2.036862 TCCCATGATGCAGAATCTCGAG 59.963 50.000 5.93 5.93 36.15 4.04
2605 2632 2.041701 TCCCATGATGCAGAATCTCGA 58.958 47.619 0.00 0.00 36.15 4.04
2606 2633 2.538512 TCCCATGATGCAGAATCTCG 57.461 50.000 0.00 0.00 36.15 4.04
2607 2634 4.942483 CCTATTCCCATGATGCAGAATCTC 59.058 45.833 10.85 0.00 36.15 2.75
2608 2635 4.263816 CCCTATTCCCATGATGCAGAATCT 60.264 45.833 10.85 0.00 36.15 2.40
2609 2636 4.015084 CCCTATTCCCATGATGCAGAATC 58.985 47.826 10.85 0.00 35.67 2.52
2610 2637 3.400322 ACCCTATTCCCATGATGCAGAAT 59.600 43.478 11.84 11.84 33.66 2.40
2611 2638 2.785269 ACCCTATTCCCATGATGCAGAA 59.215 45.455 0.00 0.00 0.00 3.02
2612 2639 2.421725 ACCCTATTCCCATGATGCAGA 58.578 47.619 0.00 0.00 0.00 4.26
2613 2640 2.965671 ACCCTATTCCCATGATGCAG 57.034 50.000 0.00 0.00 0.00 4.41
2614 2641 3.915711 TCATACCCTATTCCCATGATGCA 59.084 43.478 0.00 0.00 0.00 3.96
2615 2642 4.225942 TCTCATACCCTATTCCCATGATGC 59.774 45.833 0.00 0.00 0.00 3.91
2616 2643 6.354938 CATCTCATACCCTATTCCCATGATG 58.645 44.000 0.00 0.00 0.00 3.07
2617 2644 5.431073 CCATCTCATACCCTATTCCCATGAT 59.569 44.000 0.00 0.00 0.00 2.45
2618 2645 4.784838 CCATCTCATACCCTATTCCCATGA 59.215 45.833 0.00 0.00 0.00 3.07
2619 2646 4.537688 ACCATCTCATACCCTATTCCCATG 59.462 45.833 0.00 0.00 0.00 3.66
2620 2647 4.537688 CACCATCTCATACCCTATTCCCAT 59.462 45.833 0.00 0.00 0.00 4.00
2621 2648 3.909995 CACCATCTCATACCCTATTCCCA 59.090 47.826 0.00 0.00 0.00 4.37
2622 2649 3.910627 ACACCATCTCATACCCTATTCCC 59.089 47.826 0.00 0.00 0.00 3.97
2738 2769 1.128692 GGACGAAATCTGTTCCAAGCG 59.871 52.381 0.00 0.00 0.00 4.68
2739 2770 2.151202 TGGACGAAATCTGTTCCAAGC 58.849 47.619 0.00 0.00 0.00 4.01
2751 2782 4.169508 CACACAACATGTTTTGGACGAAA 58.830 39.130 24.50 0.00 40.64 3.46
2758 2789 2.600470 AGGGCACACAACATGTTTTG 57.400 45.000 20.48 20.48 40.64 2.44
2873 2906 8.673711 CAGCTTAGCAACAGGTGTTAAATTATA 58.326 33.333 7.07 0.00 36.32 0.98
2906 2939 7.989741 ACCATCAGGAGATACAGAATTTGTAAG 59.010 37.037 5.11 0.00 41.05 2.34
2983 3016 7.548075 ACGAACTCTCCGTTGATAAATATTTGT 59.452 33.333 11.05 3.86 36.83 2.83
3001 3034 1.536662 AGAGCCCCCAACGAACTCT 60.537 57.895 0.00 0.00 32.94 3.24
3070 3103 9.685276 AGTGATGATCCACAGTCAAAAATAATA 57.315 29.630 5.12 0.00 39.42 0.98
3071 3104 8.585471 AGTGATGATCCACAGTCAAAAATAAT 57.415 30.769 5.12 0.00 39.42 1.28
3072 3105 9.685276 ATAGTGATGATCCACAGTCAAAAATAA 57.315 29.630 5.12 0.00 39.42 1.40
3073 3106 9.685276 AATAGTGATGATCCACAGTCAAAAATA 57.315 29.630 5.12 0.00 39.42 1.40
3074 3107 8.585471 AATAGTGATGATCCACAGTCAAAAAT 57.415 30.769 5.12 0.00 39.42 1.82
3075 3108 8.408043 AAATAGTGATGATCCACAGTCAAAAA 57.592 30.769 5.12 0.00 39.42 1.94
3076 3109 7.665145 TGAAATAGTGATGATCCACAGTCAAAA 59.335 33.333 5.12 0.00 39.42 2.44
3077 3110 7.167535 TGAAATAGTGATGATCCACAGTCAAA 58.832 34.615 5.12 0.00 39.42 2.69
3078 3111 6.710278 TGAAATAGTGATGATCCACAGTCAA 58.290 36.000 5.12 0.00 39.42 3.18
3079 3112 6.298441 TGAAATAGTGATGATCCACAGTCA 57.702 37.500 5.12 0.92 39.42 3.41
3080 3113 7.496920 TGAATGAAATAGTGATGATCCACAGTC 59.503 37.037 5.12 0.00 39.42 3.51
3081 3114 7.341030 TGAATGAAATAGTGATGATCCACAGT 58.659 34.615 5.12 3.96 39.42 3.55
3082 3115 7.520131 GCTGAATGAAATAGTGATGATCCACAG 60.520 40.741 5.12 0.00 39.42 3.66
3083 3116 6.261603 GCTGAATGAAATAGTGATGATCCACA 59.738 38.462 5.12 0.00 39.42 4.17
3084 3117 6.261603 TGCTGAATGAAATAGTGATGATCCAC 59.738 38.462 0.00 0.00 37.32 4.02
3085 3118 6.358991 TGCTGAATGAAATAGTGATGATCCA 58.641 36.000 0.00 0.00 0.00 3.41
3136 3169 7.416154 TTTATAGAGAACAAGTCAACCAACG 57.584 36.000 0.00 0.00 0.00 4.10
3155 3188 9.077885 AGTTCACCTTTCTGCAGAAAATTTATA 57.922 29.630 34.71 19.52 42.72 0.98
3156 3189 7.955918 AGTTCACCTTTCTGCAGAAAATTTAT 58.044 30.769 34.71 19.35 42.72 1.40
3167 3200 5.966742 AATCCTTAAGTTCACCTTTCTGC 57.033 39.130 0.97 0.00 34.46 4.26
3176 3209 8.934023 AATCACCAAGTAAATCCTTAAGTTCA 57.066 30.769 0.97 0.00 0.00 3.18
3331 3364 3.249320 CGATGATGAAAATCCTGCGTCAT 59.751 43.478 0.00 0.00 40.06 3.06
3489 3525 3.917760 CGCAAACGGGGCCCAAAA 61.918 61.111 26.86 0.00 34.97 2.44
3497 3533 0.239879 ATTACTGCAACGCAAACGGG 59.760 50.000 0.00 0.00 46.04 5.28
3594 3756 2.332654 GGTGCTTTCGCGGTGGAAT 61.333 57.895 6.13 0.00 39.65 3.01
3606 3768 1.098050 GCCTTGAATCGATGGTGCTT 58.902 50.000 0.00 0.00 0.00 3.91
3607 3769 0.254178 AGCCTTGAATCGATGGTGCT 59.746 50.000 0.00 0.30 0.00 4.40
3720 3897 0.811616 CCAAAATCCGCCCTCGAGAG 60.812 60.000 15.71 0.16 38.10 3.20
3722 3899 1.819632 CCCAAAATCCGCCCTCGAG 60.820 63.158 5.13 5.13 38.10 4.04
3798 4055 5.240623 GGGGGCCTTTTCACAAAAATTAAAG 59.759 40.000 0.84 0.00 34.00 1.85
3811 4068 0.262876 ATGGATCTGGGGGCCTTTTC 59.737 55.000 0.84 0.00 0.00 2.29
3869 4126 5.601313 AGACTTCAGTGGTAGTTCAAGGTTA 59.399 40.000 0.00 0.00 0.00 2.85
3875 4132 6.759827 GTGTTTTAGACTTCAGTGGTAGTTCA 59.240 38.462 0.00 0.00 0.00 3.18
3882 4139 6.526674 GTGTTTTGTGTTTTAGACTTCAGTGG 59.473 38.462 0.00 0.00 0.00 4.00
3898 4155 6.969366 TCATAGTTCAGGATTGTGTTTTGTG 58.031 36.000 0.00 0.00 0.00 3.33
3903 4160 5.181245 CGGTTTCATAGTTCAGGATTGTGTT 59.819 40.000 0.00 0.00 0.00 3.32
3904 4161 4.695455 CGGTTTCATAGTTCAGGATTGTGT 59.305 41.667 0.00 0.00 0.00 3.72
3905 4162 4.695455 ACGGTTTCATAGTTCAGGATTGTG 59.305 41.667 0.00 0.00 0.00 3.33
3906 4163 4.906618 ACGGTTTCATAGTTCAGGATTGT 58.093 39.130 0.00 0.00 0.00 2.71
3907 4164 5.178797 AGACGGTTTCATAGTTCAGGATTG 58.821 41.667 0.00 0.00 0.00 2.67
3910 4167 5.988310 TTAGACGGTTTCATAGTTCAGGA 57.012 39.130 0.00 0.00 0.00 3.86
3911 4168 9.408069 GTATATTAGACGGTTTCATAGTTCAGG 57.592 37.037 0.00 0.00 0.00 3.86
3912 4169 9.961265 TGTATATTAGACGGTTTCATAGTTCAG 57.039 33.333 0.00 0.00 0.00 3.02
3915 4172 9.538508 GGTTGTATATTAGACGGTTTCATAGTT 57.461 33.333 0.00 0.00 0.00 2.24
3916 4173 8.146412 GGGTTGTATATTAGACGGTTTCATAGT 58.854 37.037 0.00 0.00 0.00 2.12
3917 4174 8.365647 AGGGTTGTATATTAGACGGTTTCATAG 58.634 37.037 0.00 0.00 0.00 2.23
3918 4175 8.253867 AGGGTTGTATATTAGACGGTTTCATA 57.746 34.615 0.00 0.00 0.00 2.15
3919 4176 7.133133 AGGGTTGTATATTAGACGGTTTCAT 57.867 36.000 0.00 0.00 0.00 2.57
3920 4177 6.154877 TGAGGGTTGTATATTAGACGGTTTCA 59.845 38.462 0.00 0.00 0.00 2.69
3921 4178 6.576185 TGAGGGTTGTATATTAGACGGTTTC 58.424 40.000 0.00 0.00 0.00 2.78
3922 4179 6.549433 TGAGGGTTGTATATTAGACGGTTT 57.451 37.500 0.00 0.00 0.00 3.27
3926 4183 5.455056 AGCTGAGGGTTGTATATTAGACG 57.545 43.478 0.00 0.00 0.00 4.18
3935 4192 3.219281 GTTTTGGAAGCTGAGGGTTGTA 58.781 45.455 0.00 0.00 32.93 2.41
3946 4203 0.392706 CCAACCCTGGTTTTGGAAGC 59.607 55.000 15.96 0.00 44.51 3.86
3975 4232 1.071567 GCGCCGACTAGTCTGTTGAC 61.072 60.000 20.34 1.01 43.22 3.18
3976 4233 1.211969 GCGCCGACTAGTCTGTTGA 59.788 57.895 20.34 0.00 0.00 3.18
3977 4234 1.805945 GGCGCCGACTAGTCTGTTG 60.806 63.158 20.34 11.69 0.00 3.33
3978 4235 1.812686 TTGGCGCCGACTAGTCTGTT 61.813 55.000 23.90 0.00 0.00 3.16
3979 4236 2.214181 CTTGGCGCCGACTAGTCTGT 62.214 60.000 23.90 0.00 0.00 3.41
3980 4237 1.517257 CTTGGCGCCGACTAGTCTG 60.517 63.158 23.90 15.08 0.00 3.51
3981 4238 1.533469 AACTTGGCGCCGACTAGTCT 61.533 55.000 23.90 10.00 0.00 3.24
3982 4239 1.080025 AACTTGGCGCCGACTAGTC 60.080 57.895 23.90 13.18 0.00 2.59
3983 4240 1.374252 CAACTTGGCGCCGACTAGT 60.374 57.895 23.90 18.64 0.00 2.57
3984 4241 0.108992 TACAACTTGGCGCCGACTAG 60.109 55.000 23.90 17.97 0.00 2.57
3985 4242 0.388907 GTACAACTTGGCGCCGACTA 60.389 55.000 23.90 0.00 0.00 2.59
3986 4243 1.666872 GTACAACTTGGCGCCGACT 60.667 57.895 23.90 5.89 0.00 4.18
3987 4244 2.858158 GTACAACTTGGCGCCGAC 59.142 61.111 23.90 2.46 0.00 4.79
3988 4245 2.735478 CGTACAACTTGGCGCCGA 60.735 61.111 23.90 20.69 0.00 5.54
3989 4246 4.439472 GCGTACAACTTGGCGCCG 62.439 66.667 23.90 11.34 38.96 6.46
3990 4247 2.686816 ATGCGTACAACTTGGCGCC 61.687 57.895 22.73 22.73 42.18 6.53
3991 4248 1.511887 CATGCGTACAACTTGGCGC 60.512 57.895 19.49 19.49 42.79 6.53
3992 4249 0.179225 GACATGCGTACAACTTGGCG 60.179 55.000 0.00 0.00 0.00 5.69
3993 4250 0.871722 TGACATGCGTACAACTTGGC 59.128 50.000 0.00 0.00 0.00 4.52
3994 4251 1.196808 GGTGACATGCGTACAACTTGG 59.803 52.381 0.00 0.00 0.00 3.61
3995 4252 1.870402 TGGTGACATGCGTACAACTTG 59.130 47.619 0.00 0.00 33.40 3.16
3996 4253 2.248280 TGGTGACATGCGTACAACTT 57.752 45.000 0.00 0.00 33.40 2.66
3997 4254 3.999821 TGGTGACATGCGTACAACT 57.000 47.368 0.00 0.00 33.40 3.16
4010 4267 8.686334 GCAAATTTTAGATTTAGGAGATGGTGA 58.314 33.333 0.00 0.00 0.00 4.02
4011 4268 8.689972 AGCAAATTTTAGATTTAGGAGATGGTG 58.310 33.333 0.00 0.00 0.00 4.17
4012 4269 8.829373 AGCAAATTTTAGATTTAGGAGATGGT 57.171 30.769 0.00 0.00 0.00 3.55
4013 4270 9.741647 GAAGCAAATTTTAGATTTAGGAGATGG 57.258 33.333 0.00 0.00 0.00 3.51
4032 4289 8.912988 CCCACTGGATAAAATAATAGAAGCAAA 58.087 33.333 0.00 0.00 0.00 3.68
4033 4290 7.014230 GCCCACTGGATAAAATAATAGAAGCAA 59.986 37.037 0.00 0.00 0.00 3.91
4034 4291 6.490040 GCCCACTGGATAAAATAATAGAAGCA 59.510 38.462 0.00 0.00 0.00 3.91
4035 4292 6.490040 TGCCCACTGGATAAAATAATAGAAGC 59.510 38.462 0.00 0.00 0.00 3.86
4036 4293 8.641498 ATGCCCACTGGATAAAATAATAGAAG 57.359 34.615 0.00 0.00 0.00 2.85
4038 4295 9.515226 GTTATGCCCACTGGATAAAATAATAGA 57.485 33.333 0.00 0.00 0.00 1.98
4039 4296 9.520515 AGTTATGCCCACTGGATAAAATAATAG 57.479 33.333 0.00 0.00 0.00 1.73
4040 4297 9.875708 AAGTTATGCCCACTGGATAAAATAATA 57.124 29.630 0.00 0.00 0.00 0.98
4041 4298 8.782137 AAGTTATGCCCACTGGATAAAATAAT 57.218 30.769 0.00 0.00 0.00 1.28
4042 4299 8.058847 AGAAGTTATGCCCACTGGATAAAATAA 58.941 33.333 0.00 0.00 0.00 1.40
4043 4300 7.582719 AGAAGTTATGCCCACTGGATAAAATA 58.417 34.615 0.00 0.00 0.00 1.40
4044 4301 6.435164 AGAAGTTATGCCCACTGGATAAAAT 58.565 36.000 0.00 0.00 0.00 1.82
4045 4302 5.826643 AGAAGTTATGCCCACTGGATAAAA 58.173 37.500 0.00 0.00 0.00 1.52
4046 4303 5.450818 AGAAGTTATGCCCACTGGATAAA 57.549 39.130 0.00 0.00 0.00 1.40
4047 4304 5.045213 TCAAGAAGTTATGCCCACTGGATAA 60.045 40.000 0.00 0.00 0.00 1.75
4048 4305 4.473196 TCAAGAAGTTATGCCCACTGGATA 59.527 41.667 0.00 0.00 0.00 2.59
4049 4306 3.266772 TCAAGAAGTTATGCCCACTGGAT 59.733 43.478 0.00 0.00 0.00 3.41
4050 4307 2.642311 TCAAGAAGTTATGCCCACTGGA 59.358 45.455 0.00 0.00 0.00 3.86
4051 4308 3.071874 TCAAGAAGTTATGCCCACTGG 57.928 47.619 0.00 0.00 0.00 4.00
4052 4309 4.520492 AGTTTCAAGAAGTTATGCCCACTG 59.480 41.667 0.00 0.00 0.00 3.66
4053 4310 4.729868 AGTTTCAAGAAGTTATGCCCACT 58.270 39.130 0.00 0.00 0.00 4.00
4054 4311 5.453567 AAGTTTCAAGAAGTTATGCCCAC 57.546 39.130 0.00 0.00 0.00 4.61
4055 4312 5.596361 TGAAAGTTTCAAGAAGTTATGCCCA 59.404 36.000 15.92 0.00 36.59 5.36
4056 4313 5.920840 GTGAAAGTTTCAAGAAGTTATGCCC 59.079 40.000 19.63 0.00 42.15 5.36
4057 4314 6.503524 TGTGAAAGTTTCAAGAAGTTATGCC 58.496 36.000 19.63 4.00 42.15 4.40
4058 4315 7.417612 TCTGTGAAAGTTTCAAGAAGTTATGC 58.582 34.615 19.63 4.48 42.15 3.14
4059 4316 9.956720 AATCTGTGAAAGTTTCAAGAAGTTATG 57.043 29.630 19.63 3.58 42.15 1.90
4060 4317 9.956720 CAATCTGTGAAAGTTTCAAGAAGTTAT 57.043 29.630 19.63 7.24 42.15 1.89
4061 4318 9.173021 TCAATCTGTGAAAGTTTCAAGAAGTTA 57.827 29.630 19.63 9.35 42.15 2.24
4062 4319 8.055279 TCAATCTGTGAAAGTTTCAAGAAGTT 57.945 30.769 19.63 12.76 42.15 2.66
4063 4320 7.630242 TCAATCTGTGAAAGTTTCAAGAAGT 57.370 32.000 19.63 12.91 42.15 3.01
4076 4333 7.064490 GCCAAAAGAAAGTTTTCAATCTGTGAA 59.936 33.333 7.30 0.00 44.74 3.18
4077 4334 6.534793 GCCAAAAGAAAGTTTTCAATCTGTGA 59.465 34.615 7.30 0.00 39.61 3.58
4078 4335 6.238184 GGCCAAAAGAAAGTTTTCAATCTGTG 60.238 38.462 0.00 0.00 39.61 3.66
4079 4336 5.817296 GGCCAAAAGAAAGTTTTCAATCTGT 59.183 36.000 0.00 0.00 39.61 3.41
4080 4337 5.816777 TGGCCAAAAGAAAGTTTTCAATCTG 59.183 36.000 0.61 0.04 39.61 2.90
4081 4338 5.988287 TGGCCAAAAGAAAGTTTTCAATCT 58.012 33.333 0.61 0.00 39.61 2.40
4082 4339 6.676237 TTGGCCAAAAGAAAGTTTTCAATC 57.324 33.333 17.98 0.00 39.61 2.67
4083 4340 7.459795 TTTTGGCCAAAAGAAAGTTTTCAAT 57.540 28.000 34.56 0.00 39.61 2.57
4084 4341 6.884280 TTTTGGCCAAAAGAAAGTTTTCAA 57.116 29.167 34.56 12.41 39.61 2.69
4085 4342 7.459795 AATTTTGGCCAAAAGAAAGTTTTCA 57.540 28.000 38.50 18.98 42.72 2.69
4086 4343 8.026026 TCAAATTTTGGCCAAAAGAAAGTTTTC 58.974 29.630 38.50 0.00 42.72 2.29
4087 4344 7.890515 TCAAATTTTGGCCAAAAGAAAGTTTT 58.109 26.923 38.50 30.27 42.72 2.43
4088 4345 7.459795 TCAAATTTTGGCCAAAAGAAAGTTT 57.540 28.000 38.50 30.84 42.72 2.66
4089 4346 7.459795 TTCAAATTTTGGCCAAAAGAAAGTT 57.540 28.000 38.50 27.86 42.72 2.66
4090 4347 7.338957 TGATTCAAATTTTGGCCAAAAGAAAGT 59.661 29.630 38.50 24.95 42.72 2.66
4091 4348 7.705214 TGATTCAAATTTTGGCCAAAAGAAAG 58.295 30.769 38.50 28.78 42.72 2.62
4092 4349 7.636150 TGATTCAAATTTTGGCCAAAAGAAA 57.364 28.000 38.50 29.33 42.72 2.52
4093 4350 7.636150 TTGATTCAAATTTTGGCCAAAAGAA 57.364 28.000 38.50 34.18 42.72 2.52
4094 4351 7.636150 TTTGATTCAAATTTTGGCCAAAAGA 57.364 28.000 38.50 29.76 42.72 2.52
4095 4352 8.699283 TTTTTGATTCAAATTTTGGCCAAAAG 57.301 26.923 38.50 28.31 42.72 2.27
4096 4353 8.309656 ACTTTTTGATTCAAATTTTGGCCAAAA 58.690 25.926 38.39 38.39 43.48 2.44
4097 4354 7.834803 ACTTTTTGATTCAAATTTTGGCCAAA 58.165 26.923 27.13 27.13 33.19 3.28
4098 4355 7.338957 AGACTTTTTGATTCAAATTTTGGCCAA 59.661 29.630 16.05 16.05 33.19 4.52
4099 4356 6.827762 AGACTTTTTGATTCAAATTTTGGCCA 59.172 30.769 12.39 0.00 33.19 5.36
4100 4357 7.012232 TCAGACTTTTTGATTCAAATTTTGGCC 59.988 33.333 12.39 0.00 33.19 5.36
4101 4358 7.918643 TCAGACTTTTTGATTCAAATTTTGGC 58.081 30.769 12.39 5.96 33.19 4.52
4114 4371 9.771915 GCAAAAATTCAAATTCAGACTTTTTGA 57.228 25.926 29.00 9.50 46.85 2.69
4115 4372 9.777575 AGCAAAAATTCAAATTCAGACTTTTTG 57.222 25.926 25.20 25.20 46.75 2.44
4116 4373 9.992910 GAGCAAAAATTCAAATTCAGACTTTTT 57.007 25.926 12.11 12.11 37.94 1.94
4117 4374 9.387257 AGAGCAAAAATTCAAATTCAGACTTTT 57.613 25.926 0.00 4.25 31.73 2.27
4118 4375 8.953368 AGAGCAAAAATTCAAATTCAGACTTT 57.047 26.923 0.00 0.00 0.00 2.66
4119 4376 9.688592 CTAGAGCAAAAATTCAAATTCAGACTT 57.311 29.630 0.00 0.00 0.00 3.01
4120 4377 7.811713 GCTAGAGCAAAAATTCAAATTCAGACT 59.188 33.333 0.00 0.00 41.59 3.24
4121 4378 7.811713 AGCTAGAGCAAAAATTCAAATTCAGAC 59.188 33.333 4.01 0.00 45.16 3.51
4122 4379 7.889469 AGCTAGAGCAAAAATTCAAATTCAGA 58.111 30.769 4.01 0.00 45.16 3.27
4123 4380 8.530269 AAGCTAGAGCAAAAATTCAAATTCAG 57.470 30.769 4.01 0.00 45.16 3.02
4124 4381 8.891671 AAAGCTAGAGCAAAAATTCAAATTCA 57.108 26.923 4.01 0.00 45.16 2.57
4151 4408 9.522804 CTTAACAAGTGTTGCCAAGTATAAAAA 57.477 29.630 6.94 0.00 38.90 1.94
4152 4409 8.904834 TCTTAACAAGTGTTGCCAAGTATAAAA 58.095 29.630 6.94 0.00 38.90 1.52
4153 4410 8.347035 GTCTTAACAAGTGTTGCCAAGTATAAA 58.653 33.333 6.94 0.00 38.90 1.40
4154 4411 7.717875 AGTCTTAACAAGTGTTGCCAAGTATAA 59.282 33.333 6.94 0.00 38.90 0.98
4155 4412 7.221450 AGTCTTAACAAGTGTTGCCAAGTATA 58.779 34.615 6.94 0.00 38.90 1.47
4156 4413 6.062095 AGTCTTAACAAGTGTTGCCAAGTAT 58.938 36.000 6.94 0.00 38.90 2.12
4157 4414 5.433526 AGTCTTAACAAGTGTTGCCAAGTA 58.566 37.500 6.94 0.00 38.90 2.24
4158 4415 4.270008 AGTCTTAACAAGTGTTGCCAAGT 58.730 39.130 6.94 0.00 38.90 3.16
4159 4416 4.900635 AGTCTTAACAAGTGTTGCCAAG 57.099 40.909 6.94 3.37 38.90 3.61
4160 4417 5.393678 GGAAAGTCTTAACAAGTGTTGCCAA 60.394 40.000 6.94 0.00 38.90 4.52
4161 4418 4.097286 GGAAAGTCTTAACAAGTGTTGCCA 59.903 41.667 6.94 0.00 38.90 4.92
4162 4419 4.499188 GGGAAAGTCTTAACAAGTGTTGCC 60.499 45.833 6.94 0.00 38.90 4.52
4163 4420 4.097286 TGGGAAAGTCTTAACAAGTGTTGC 59.903 41.667 6.94 0.00 38.90 4.17
4164 4421 5.588648 TCTGGGAAAGTCTTAACAAGTGTTG 59.411 40.000 6.94 0.00 38.90 3.33
4165 4422 5.751586 TCTGGGAAAGTCTTAACAAGTGTT 58.248 37.500 1.75 1.75 41.73 3.32
4166 4423 5.367945 TCTGGGAAAGTCTTAACAAGTGT 57.632 39.130 0.00 0.00 0.00 3.55
4167 4424 6.486657 TCAATCTGGGAAAGTCTTAACAAGTG 59.513 38.462 0.00 0.00 0.00 3.16
4168 4425 6.601332 TCAATCTGGGAAAGTCTTAACAAGT 58.399 36.000 0.00 0.00 0.00 3.16
4169 4426 7.510549 TTCAATCTGGGAAAGTCTTAACAAG 57.489 36.000 0.00 0.00 0.00 3.16
4170 4427 9.010029 GTATTCAATCTGGGAAAGTCTTAACAA 57.990 33.333 0.00 0.00 0.00 2.83
4171 4428 8.160765 TGTATTCAATCTGGGAAAGTCTTAACA 58.839 33.333 0.00 0.00 0.00 2.41
4172 4429 8.561738 TGTATTCAATCTGGGAAAGTCTTAAC 57.438 34.615 0.00 0.00 0.00 2.01
4173 4430 9.753674 ATTGTATTCAATCTGGGAAAGTCTTAA 57.246 29.630 0.00 0.00 39.76 1.85
4174 4431 9.177608 CATTGTATTCAATCTGGGAAAGTCTTA 57.822 33.333 0.00 0.00 41.66 2.10
4175 4432 7.123247 CCATTGTATTCAATCTGGGAAAGTCTT 59.877 37.037 0.00 0.00 41.66 3.01
4176 4433 6.604795 CCATTGTATTCAATCTGGGAAAGTCT 59.395 38.462 0.00 0.00 41.66 3.24
4177 4434 6.378280 ACCATTGTATTCAATCTGGGAAAGTC 59.622 38.462 8.90 0.00 41.66 3.01
4178 4435 6.256053 ACCATTGTATTCAATCTGGGAAAGT 58.744 36.000 8.90 0.00 41.66 2.66
4179 4436 6.780457 ACCATTGTATTCAATCTGGGAAAG 57.220 37.500 8.90 0.00 41.66 2.62
4180 4437 6.496565 ACAACCATTGTATTCAATCTGGGAAA 59.503 34.615 8.90 0.00 43.27 3.13
4181 4438 6.015918 ACAACCATTGTATTCAATCTGGGAA 58.984 36.000 8.90 0.00 43.27 3.97
4182 4439 5.418524 CACAACCATTGTATTCAATCTGGGA 59.581 40.000 8.90 0.00 43.23 4.37
4183 4440 5.394443 CCACAACCATTGTATTCAATCTGGG 60.394 44.000 8.90 4.61 43.23 4.45
4184 4441 5.418524 TCCACAACCATTGTATTCAATCTGG 59.581 40.000 3.81 3.81 43.23 3.86
4185 4442 6.513806 TCCACAACCATTGTATTCAATCTG 57.486 37.500 0.00 0.00 43.23 2.90
4186 4443 7.722949 AATCCACAACCATTGTATTCAATCT 57.277 32.000 0.00 0.00 43.23 2.40
4187 4444 8.776376 AAAATCCACAACCATTGTATTCAATC 57.224 30.769 0.00 0.00 43.23 2.67
4188 4445 9.001542 CAAAAATCCACAACCATTGTATTCAAT 57.998 29.630 0.00 0.00 43.23 2.57
4189 4446 8.206867 TCAAAAATCCACAACCATTGTATTCAA 58.793 29.630 0.00 0.00 43.23 2.69
4190 4447 7.730084 TCAAAAATCCACAACCATTGTATTCA 58.270 30.769 0.00 0.00 43.23 2.57
4191 4448 8.087750 TCTCAAAAATCCACAACCATTGTATTC 58.912 33.333 0.00 0.00 43.23 1.75
4192 4449 7.961351 TCTCAAAAATCCACAACCATTGTATT 58.039 30.769 0.00 0.00 43.23 1.89
4193 4450 7.537596 TCTCAAAAATCCACAACCATTGTAT 57.462 32.000 0.00 0.00 43.23 2.29
4194 4451 6.968263 TCTCAAAAATCCACAACCATTGTA 57.032 33.333 0.00 0.00 43.23 2.41
4195 4452 5.867903 TCTCAAAAATCCACAACCATTGT 57.132 34.783 0.00 0.00 46.75 2.71
4196 4453 7.733402 AATTCTCAAAAATCCACAACCATTG 57.267 32.000 0.00 0.00 0.00 2.82
4197 4454 8.750515 AAAATTCTCAAAAATCCACAACCATT 57.249 26.923 0.00 0.00 0.00 3.16
4198 4455 8.750515 AAAAATTCTCAAAAATCCACAACCAT 57.249 26.923 0.00 0.00 0.00 3.55



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.