Multiple sequence alignment - TraesCS3D01G128400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G128400 chr3D 100.000 6931 0 0 969 7899 86333533 86340463 0.000000e+00 12800.0
1 TraesCS3D01G128400 chr3D 100.000 523 0 0 1 523 86332565 86333087 0.000000e+00 966.0
2 TraesCS3D01G128400 chr3D 83.750 160 20 5 7177 7336 441388667 441388820 6.390000e-31 147.0
3 TraesCS3D01G128400 chr3A 98.399 2436 36 3 2331 4765 102618259 102620692 0.000000e+00 4279.0
4 TraesCS3D01G128400 chr3A 95.303 2065 51 15 5633 7669 102620689 102622735 0.000000e+00 3234.0
5 TraesCS3D01G128400 chr3A 94.448 1387 59 10 971 2346 102616695 102618074 0.000000e+00 2119.0
6 TraesCS3D01G128400 chr3A 92.355 327 7 6 205 523 102615744 102616060 4.350000e-122 449.0
7 TraesCS3D01G128400 chr3A 90.789 228 12 8 1 219 102614622 102614849 5.990000e-76 296.0
8 TraesCS3D01G128400 chr3A 100.000 29 0 0 7148 7176 17516779 17516807 4.000000e-03 54.7
9 TraesCS3D01G128400 chr3B 96.308 2546 75 11 2930 5470 136443821 136446352 0.000000e+00 4163.0
10 TraesCS3D01G128400 chr3B 96.191 1969 67 4 970 2937 136441678 136443639 0.000000e+00 3214.0
11 TraesCS3D01G128400 chr3B 94.025 1272 41 11 6024 7282 136446347 136447596 0.000000e+00 1895.0
12 TraesCS3D01G128400 chr3B 86.759 506 25 17 36 523 136441093 136441574 7.020000e-145 525.0
13 TraesCS3D01G128400 chr3B 84.932 365 32 11 7327 7672 136447597 136447957 1.630000e-91 348.0
14 TraesCS3D01G128400 chr3B 84.713 157 22 2 7158 7313 328715425 328715580 1.060000e-33 156.0
15 TraesCS3D01G128400 chr3B 83.750 160 18 6 7177 7335 245935461 245935613 2.300000e-30 145.0
16 TraesCS3D01G128400 chr1B 92.661 1635 93 13 970 2594 372912043 372913660 0.000000e+00 2329.0
17 TraesCS3D01G128400 chr7B 94.016 1220 63 4 1384 2597 326392930 326394145 0.000000e+00 1840.0
18 TraesCS3D01G128400 chr7B 90.258 349 28 2 970 1318 326392589 326392931 1.210000e-122 451.0
19 TraesCS3D01G128400 chr2B 95.242 1093 38 6 1507 2597 189504488 189503408 0.000000e+00 1718.0
20 TraesCS3D01G128400 chr2B 89.506 486 38 6 1043 1520 189512082 189511602 3.150000e-168 603.0
21 TraesCS3D01G128400 chr2B 84.211 171 8 4 359 523 189512390 189512233 1.780000e-31 148.0
22 TraesCS3D01G128400 chr2B 83.436 163 19 6 7177 7338 190023043 190022888 2.300000e-30 145.0
23 TraesCS3D01G128400 chr2D 88.278 546 51 7 1738 2283 605355301 605355833 6.680000e-180 641.0
24 TraesCS3D01G128400 chr2D 87.963 540 52 7 1744 2283 151662784 151662258 6.730000e-175 625.0
25 TraesCS3D01G128400 chr2D 94.118 51 3 0 6097 6147 79050913 79050863 2.360000e-10 78.7
26 TraesCS3D01G128400 chr2D 100.000 29 0 0 7148 7176 101695454 101695426 4.000000e-03 54.7
27 TraesCS3D01G128400 chr2D 100.000 29 0 0 7148 7176 548076842 548076870 4.000000e-03 54.7
28 TraesCS3D01G128400 chr7D 87.912 546 53 7 1738 2283 6716802 6717334 1.450000e-176 630.0
29 TraesCS3D01G128400 chr7D 87.963 540 51 8 1744 2283 294648783 294648258 6.730000e-175 625.0
30 TraesCS3D01G128400 chr7D 83.088 136 11 7 5088 5222 60287368 60287492 6.480000e-21 113.0
31 TraesCS3D01G128400 chr7D 93.478 46 3 0 6102 6147 409491560 409491515 1.420000e-07 69.4
32 TraesCS3D01G128400 chr7D 100.000 29 0 0 7148 7176 626135656 626135684 4.000000e-03 54.7
33 TraesCS3D01G128400 chr4B 83.475 587 93 4 6261 6845 322691641 322692225 1.940000e-150 544.0
34 TraesCS3D01G128400 chr4B 82.112 587 101 4 6261 6845 322770131 322770715 4.260000e-137 499.0
35 TraesCS3D01G128400 chr4B 85.906 298 41 1 3876 4173 322669468 322669764 4.600000e-82 316.0
36 TraesCS3D01G128400 chr4B 84.899 298 44 1 3876 4173 322744093 322744389 4.630000e-77 300.0
37 TraesCS3D01G128400 chr4B 82.090 134 24 0 3618 3751 322743888 322744021 1.800000e-21 115.0
38 TraesCS3D01G128400 chr4D 82.964 587 96 4 6261 6845 179847918 179847334 1.950000e-145 527.0
39 TraesCS3D01G128400 chr4D 86.242 298 40 1 3876 4173 179862033 179861737 9.890000e-84 322.0
40 TraesCS3D01G128400 chr4D 83.333 168 26 2 4579 4745 179860647 179860481 3.820000e-33 154.0
41 TraesCS3D01G128400 chr4D 82.090 134 24 0 3618 3751 179862239 179862106 1.800000e-21 115.0
42 TraesCS3D01G128400 chr4D 90.698 86 8 0 1657 1742 320027052 320026967 1.800000e-21 115.0
43 TraesCS3D01G128400 chr4A 82.683 589 94 8 6261 6845 342457233 342457817 4.230000e-142 516.0
44 TraesCS3D01G128400 chr4A 86.207 290 40 0 3876 4165 342447007 342447296 1.650000e-81 315.0
45 TraesCS3D01G128400 chr4A 83.648 159 24 2 4567 4724 342448389 342448546 1.780000e-31 148.0
46 TraesCS3D01G128400 chr4A 82.836 134 23 0 3618 3751 342446801 342446934 3.870000e-23 121.0
47 TraesCS3D01G128400 chr6B 87.770 139 13 3 7176 7313 537553840 537553975 8.200000e-35 159.0
48 TraesCS3D01G128400 chr6B 84.810 158 19 3 5067 5224 617175271 617175119 3.820000e-33 154.0
49 TraesCS3D01G128400 chr6B 82.692 156 11 6 5068 5223 641283809 641283670 2.990000e-24 124.0
50 TraesCS3D01G128400 chr6B 91.803 61 4 1 5164 5223 185678619 185678559 5.080000e-12 84.2
51 TraesCS3D01G128400 chr2A 84.375 160 17 4 7177 7335 141506470 141506318 4.940000e-32 150.0
52 TraesCS3D01G128400 chr2A 83.234 167 20 6 7176 7341 310409056 310408897 6.390000e-31 147.0
53 TraesCS3D01G128400 chr6D 82.166 157 12 6 5067 5223 426058450 426058310 3.870000e-23 121.0
54 TraesCS3D01G128400 chr6D 85.047 107 12 2 5118 5224 410396985 410396883 1.080000e-18 106.0
55 TraesCS3D01G128400 chr5B 90.323 93 8 1 1650 1742 262050953 262051044 3.870000e-23 121.0
56 TraesCS3D01G128400 chr5A 91.860 86 7 0 1656 1741 227928521 227928606 3.870000e-23 121.0
57 TraesCS3D01G128400 chr5A 97.500 40 1 0 7136 7175 491288430 491288469 1.420000e-07 69.4
58 TraesCS3D01G128400 chr5A 86.441 59 8 0 5164 5222 331855437 331855495 1.840000e-06 65.8
59 TraesCS3D01G128400 chr1A 90.588 85 8 0 1657 1741 436259737 436259653 6.480000e-21 113.0
60 TraesCS3D01G128400 chr6A 85.047 107 12 2 5118 5224 555727896 555727794 1.080000e-18 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G128400 chr3D 86332565 86340463 7898 False 6883.0 12800 100.0000 1 7899 2 chr3D.!!$F2 7898
1 TraesCS3D01G128400 chr3A 102614622 102622735 8113 False 2075.4 4279 94.2588 1 7669 5 chr3A.!!$F2 7668
2 TraesCS3D01G128400 chr3B 136441093 136447957 6864 False 2029.0 4163 91.6430 36 7672 5 chr3B.!!$F3 7636
3 TraesCS3D01G128400 chr1B 372912043 372913660 1617 False 2329.0 2329 92.6610 970 2594 1 chr1B.!!$F1 1624
4 TraesCS3D01G128400 chr7B 326392589 326394145 1556 False 1145.5 1840 92.1370 970 2597 2 chr7B.!!$F1 1627
5 TraesCS3D01G128400 chr2B 189503408 189504488 1080 True 1718.0 1718 95.2420 1507 2597 1 chr2B.!!$R1 1090
6 TraesCS3D01G128400 chr2B 189511602 189512390 788 True 375.5 603 86.8585 359 1520 2 chr2B.!!$R3 1161
7 TraesCS3D01G128400 chr2D 605355301 605355833 532 False 641.0 641 88.2780 1738 2283 1 chr2D.!!$F2 545
8 TraesCS3D01G128400 chr2D 151662258 151662784 526 True 625.0 625 87.9630 1744 2283 1 chr2D.!!$R3 539
9 TraesCS3D01G128400 chr7D 6716802 6717334 532 False 630.0 630 87.9120 1738 2283 1 chr7D.!!$F1 545
10 TraesCS3D01G128400 chr7D 294648258 294648783 525 True 625.0 625 87.9630 1744 2283 1 chr7D.!!$R1 539
11 TraesCS3D01G128400 chr4B 322691641 322692225 584 False 544.0 544 83.4750 6261 6845 1 chr4B.!!$F2 584
12 TraesCS3D01G128400 chr4B 322770131 322770715 584 False 499.0 499 82.1120 6261 6845 1 chr4B.!!$F3 584
13 TraesCS3D01G128400 chr4B 322743888 322744389 501 False 207.5 300 83.4945 3618 4173 2 chr4B.!!$F4 555
14 TraesCS3D01G128400 chr4D 179847334 179847918 584 True 527.0 527 82.9640 6261 6845 1 chr4D.!!$R1 584
15 TraesCS3D01G128400 chr4A 342457233 342457817 584 False 516.0 516 82.6830 6261 6845 1 chr4A.!!$F1 584

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
136 138 0.043334 TCTGGAAAGAGAGGGGAGGG 59.957 60.000 0.00 0.00 0.00 4.30 F
238 1158 0.179029 ACGGAGATAAAATGGGGCGG 60.179 55.000 0.00 0.00 0.00 6.13 F
509 1436 0.250234 CTCTGCCAAAGATCCGACCA 59.750 55.000 0.00 0.00 33.29 4.02 F
1781 2910 2.263741 GCTGGCCGGCAGATTATGG 61.264 63.158 32.13 9.12 0.00 2.74 F
2296 3429 1.079057 GCCTCGTGAGTTTCCCTCC 60.079 63.158 0.00 0.00 39.65 4.30 F
3105 4627 3.855689 ACAGTGTTAGGATTTGCATGC 57.144 42.857 11.82 11.82 0.00 4.06 F
3594 5117 1.198867 TGGTTTGCGTTGAATGATCCG 59.801 47.619 0.00 0.00 0.00 4.18 F
5086 6614 0.903942 TGTTTATAAGGCGTCCCCGT 59.096 50.000 0.00 0.00 39.21 5.28 F
5512 7040 0.118346 TGGGGTCTGGTCCTGTATGT 59.882 55.000 0.00 0.00 0.00 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1230 2344 0.035630 CCTGCATAGCCATAGCCTCC 60.036 60.000 0.00 0.0 41.25 4.30 R
1730 2855 0.396695 TTACAGGCCTACTCCCTCCG 60.397 60.000 3.98 0.0 0.00 4.63 R
2292 3425 1.041437 GTTCTGGGAGGATACGGAGG 58.959 60.000 0.00 0.0 46.39 4.30 R
2961 4483 2.380084 TCACCAGGACTCAAATACGC 57.620 50.000 0.00 0.0 0.00 4.42 R
3241 4763 3.747099 CAGGATGCTGAAAAGGTTACG 57.253 47.619 8.85 0.0 0.00 3.18 R
4836 6363 1.275291 GTGCTTAGCTGACCAGGTACA 59.725 52.381 5.60 2.7 40.65 2.90 R
5135 6663 0.034863 TTAAGCGCCTAAAGTGGGGG 60.035 55.000 2.29 0.0 40.00 5.40 R
6873 8410 2.107204 ACTCCAGTTTCCATTGAGCTGT 59.893 45.455 0.00 0.0 0.00 4.40 R
7363 8908 0.249489 CAATAGAACCGGAGAGGCGG 60.249 60.000 9.46 0.0 46.52 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 88 2.042026 TGGGTGTACAGACTAGGCAGTA 59.958 50.000 0.00 0.00 34.21 2.74
115 116 1.577922 CCGACGACGAACAGGAGAA 59.422 57.895 9.28 0.00 42.66 2.87
136 138 0.043334 TCTGGAAAGAGAGGGGAGGG 59.957 60.000 0.00 0.00 0.00 4.30
178 188 4.292178 GCGCGGAGAGGATGGGAG 62.292 72.222 8.83 0.00 0.00 4.30
187 197 4.459330 GGAGAGGATGGGAGAAATGAAAG 58.541 47.826 0.00 0.00 0.00 2.62
238 1158 0.179029 ACGGAGATAAAATGGGGCGG 60.179 55.000 0.00 0.00 0.00 6.13
308 1229 2.918230 GATGGGGGCGAATCGAACGT 62.918 60.000 6.91 0.00 0.00 3.99
315 1236 2.313374 GAATCGAACGTCGCGCAG 59.687 61.111 8.75 0.00 40.21 5.18
385 1306 4.414852 CCTAAATCATGCCTTTTGTGTCG 58.585 43.478 0.00 0.00 0.00 4.35
386 1307 2.352503 AATCATGCCTTTTGTGTCGC 57.647 45.000 0.00 0.00 0.00 5.19
387 1308 1.246649 ATCATGCCTTTTGTGTCGCA 58.753 45.000 0.00 0.00 35.35 5.10
388 1309 0.592637 TCATGCCTTTTGTGTCGCAG 59.407 50.000 0.00 0.00 34.15 5.18
389 1310 0.592637 CATGCCTTTTGTGTCGCAGA 59.407 50.000 0.00 0.00 34.15 4.26
509 1436 0.250234 CTCTGCCAAAGATCCGACCA 59.750 55.000 0.00 0.00 33.29 4.02
1161 2275 5.944007 GGTCCAGGTGATTATTTAGTTGTGT 59.056 40.000 0.00 0.00 0.00 3.72
1162 2276 6.128007 GGTCCAGGTGATTATTTAGTTGTGTG 60.128 42.308 0.00 0.00 0.00 3.82
1163 2277 5.414454 TCCAGGTGATTATTTAGTTGTGTGC 59.586 40.000 0.00 0.00 0.00 4.57
1164 2278 5.415701 CCAGGTGATTATTTAGTTGTGTGCT 59.584 40.000 0.00 0.00 0.00 4.40
1165 2279 6.597672 CCAGGTGATTATTTAGTTGTGTGCTA 59.402 38.462 0.00 0.00 0.00 3.49
1230 2344 5.106396 CCATGAGAGTTAAAGTGAAAGCTGG 60.106 44.000 0.00 0.00 0.00 4.85
1261 2375 2.587322 TATGCAGGTGCCGGTGCTAC 62.587 60.000 15.00 4.35 40.54 3.58
1354 2469 3.216800 GGCCTGAGCATAATCATGTTGA 58.783 45.455 0.00 0.00 42.56 3.18
1422 2543 7.387643 ACACTTACTCCTTGTTAAAGAGATCC 58.612 38.462 0.00 0.00 35.19 3.36
1448 2569 3.382546 GCAAGATGGCAAACTGTATCCAT 59.617 43.478 7.75 7.75 41.63 3.41
1505 2626 6.078664 ACTACTGATAGGCTTATTACCTGCT 58.921 40.000 0.00 0.00 38.26 4.24
1676 2801 2.732412 ACTCACTCCGTCTCACAATG 57.268 50.000 0.00 0.00 0.00 2.82
1727 2852 7.546667 AGCTTGCAAAAACATCTTATATTGTGG 59.453 33.333 0.00 0.00 0.00 4.17
1728 2853 7.201548 GCTTGCAAAAACATCTTATATTGTGGG 60.202 37.037 0.00 0.00 0.00 4.61
1729 2854 7.473735 TGCAAAAACATCTTATATTGTGGGA 57.526 32.000 0.00 0.00 0.00 4.37
1730 2855 7.319646 TGCAAAAACATCTTATATTGTGGGAC 58.680 34.615 0.00 0.00 0.00 4.46
1754 2883 2.505819 AGGGAGTAGGCCTGTAAACATG 59.494 50.000 17.99 0.00 0.00 3.21
1781 2910 2.263741 GCTGGCCGGCAGATTATGG 61.264 63.158 32.13 9.12 0.00 2.74
1820 2949 9.793252 GACATTTATAAAATTGACAGCTGACAT 57.207 29.630 23.35 8.01 0.00 3.06
2226 3359 7.255451 GGATTTTGTTGTAGATGAGTTGTGGAA 60.255 37.037 0.00 0.00 0.00 3.53
2254 3387 3.012518 AGATTCAAATGGTTGGAGAGCG 58.987 45.455 0.00 0.00 35.29 5.03
2292 3425 2.280628 CTATTGGCCTCGTGAGTTTCC 58.719 52.381 3.32 0.00 0.00 3.13
2296 3429 1.079057 GCCTCGTGAGTTTCCCTCC 60.079 63.158 0.00 0.00 39.65 4.30
2509 3842 7.835634 AACTTTGTCTCTAAAGTAGCATAGC 57.164 36.000 4.53 0.00 46.96 2.97
2762 4095 6.320672 CCTTATGATTCCTTCTGTTTGAGCAT 59.679 38.462 0.00 0.00 0.00 3.79
2961 4483 7.758076 TGTAGTCATGTTGATTAACTTCGTAGG 59.242 37.037 1.75 0.00 37.68 3.18
2962 4484 5.581085 AGTCATGTTGATTAACTTCGTAGGC 59.419 40.000 1.75 0.00 37.68 3.93
3060 4582 6.798427 TCTAGAATGCTGAATAGGTGTCTT 57.202 37.500 0.00 0.00 0.00 3.01
3105 4627 3.855689 ACAGTGTTAGGATTTGCATGC 57.144 42.857 11.82 11.82 0.00 4.06
3241 4763 9.662947 AAACCCTTATGTAGTACATTACAGTTC 57.337 33.333 20.52 0.00 39.88 3.01
3537 5060 6.096036 AGAATGACGTCTACATTGAGTTCAG 58.904 40.000 17.92 0.00 37.96 3.02
3594 5117 1.198867 TGGTTTGCGTTGAATGATCCG 59.801 47.619 0.00 0.00 0.00 4.18
3608 5131 6.607689 TGAATGATCCGTTGTTGTTGTATTC 58.392 36.000 0.00 0.00 0.00 1.75
4835 6362 3.889538 GGATGGGGTACAAATTTAGGCTC 59.110 47.826 0.00 0.00 0.00 4.70
4836 6363 4.386424 GGATGGGGTACAAATTTAGGCTCT 60.386 45.833 0.00 0.00 0.00 4.09
4960 6488 8.470805 CAACAATGGGCTACTAGATATAGGTAG 58.529 40.741 0.00 0.00 36.83 3.18
4961 6489 7.940878 ACAATGGGCTACTAGATATAGGTAGA 58.059 38.462 0.00 0.00 36.11 2.59
4978 6506 3.950395 GGTAGAATGGATTTCTTGCTGCT 59.050 43.478 0.00 0.00 42.15 4.24
5006 6534 7.502561 ACTTGCTATTGTTTGTACCTTCTCTTT 59.497 33.333 0.00 0.00 0.00 2.52
5063 6591 3.753294 AGACCCATACAATCCGTGATC 57.247 47.619 0.00 0.00 0.00 2.92
5078 6606 3.564225 CCGTGATCCCTTGTTTATAAGGC 59.436 47.826 0.00 0.00 44.75 4.35
5081 6609 4.272748 GTGATCCCTTGTTTATAAGGCGTC 59.727 45.833 0.00 0.00 44.75 5.19
5084 6612 2.294979 CCTTGTTTATAAGGCGTCCCC 58.705 52.381 0.00 0.00 40.67 4.81
5085 6613 1.937899 CTTGTTTATAAGGCGTCCCCG 59.062 52.381 0.00 0.00 39.21 5.73
5086 6614 0.903942 TGTTTATAAGGCGTCCCCGT 59.096 50.000 0.00 0.00 39.21 5.28
5135 6663 0.386838 GCAGCCCCTTACAATCATGC 59.613 55.000 0.00 0.00 0.00 4.06
5136 6664 1.035139 CAGCCCCTTACAATCATGCC 58.965 55.000 0.00 0.00 0.00 4.40
5140 6668 0.261402 CCCTTACAATCATGCCCCCA 59.739 55.000 0.00 0.00 0.00 4.96
5199 6727 1.476845 TTGGTGCTCGCCTTAGGTCA 61.477 55.000 0.00 0.00 0.00 4.02
5201 6729 1.292223 GTGCTCGCCTTAGGTCACA 59.708 57.895 0.00 0.00 0.00 3.58
5270 6798 5.824097 TGCTGCTCATGATTTGTATGTATGT 59.176 36.000 0.00 0.00 0.00 2.29
5297 6825 6.500684 TCTAGTTTCCATGATTGCTTGAAC 57.499 37.500 0.00 0.00 0.00 3.18
5298 6826 6.003326 TCTAGTTTCCATGATTGCTTGAACA 58.997 36.000 0.00 0.00 0.00 3.18
5310 6838 7.420002 TGATTGCTTGAACACAATATAGCATC 58.580 34.615 0.00 0.00 36.65 3.91
5316 6844 5.693961 TGAACACAATATAGCATCCCATGT 58.306 37.500 0.00 0.00 0.00 3.21
5366 6894 3.359654 GGTGAACACACGCTAAAACTTG 58.640 45.455 7.25 0.00 35.62 3.16
5389 6917 9.615295 CTTGGAAATTTGCAAATTCCATTAAAG 57.385 29.630 32.90 27.19 38.05 1.85
5438 6966 4.699637 GGTGATTTACATCCATACCACGA 58.300 43.478 0.00 0.00 0.00 4.35
5439 6967 5.120399 GGTGATTTACATCCATACCACGAA 58.880 41.667 0.00 0.00 0.00 3.85
5440 6968 5.587043 GGTGATTTACATCCATACCACGAAA 59.413 40.000 0.00 0.00 0.00 3.46
5441 6969 6.457799 GGTGATTTACATCCATACCACGAAAC 60.458 42.308 0.00 0.00 0.00 2.78
5442 6970 6.315393 GTGATTTACATCCATACCACGAAACT 59.685 38.462 0.00 0.00 0.00 2.66
5443 6971 7.493320 GTGATTTACATCCATACCACGAAACTA 59.507 37.037 0.00 0.00 0.00 2.24
5444 6972 7.709182 TGATTTACATCCATACCACGAAACTAG 59.291 37.037 0.00 0.00 0.00 2.57
5445 6973 6.778834 TTACATCCATACCACGAAACTAGA 57.221 37.500 0.00 0.00 0.00 2.43
5446 6974 5.871396 ACATCCATACCACGAAACTAGAT 57.129 39.130 0.00 0.00 0.00 1.98
5447 6975 5.601662 ACATCCATACCACGAAACTAGATG 58.398 41.667 0.00 0.00 35.77 2.90
5448 6976 4.054780 TCCATACCACGAAACTAGATGC 57.945 45.455 0.00 0.00 0.00 3.91
5449 6977 3.449377 TCCATACCACGAAACTAGATGCA 59.551 43.478 0.00 0.00 0.00 3.96
5450 6978 3.555956 CCATACCACGAAACTAGATGCAC 59.444 47.826 0.00 0.00 0.00 4.57
5451 6979 4.433615 CATACCACGAAACTAGATGCACT 58.566 43.478 0.00 0.00 0.00 4.40
5452 6980 3.402628 ACCACGAAACTAGATGCACTT 57.597 42.857 0.00 0.00 0.00 3.16
5453 6981 3.326747 ACCACGAAACTAGATGCACTTC 58.673 45.455 0.00 0.00 0.00 3.01
5454 6982 3.006967 ACCACGAAACTAGATGCACTTCT 59.993 43.478 0.00 0.00 0.00 2.85
5455 6983 3.614616 CCACGAAACTAGATGCACTTCTC 59.385 47.826 0.00 0.00 0.00 2.87
5456 6984 4.237724 CACGAAACTAGATGCACTTCTCA 58.762 43.478 0.00 0.00 0.00 3.27
5457 6985 4.867047 CACGAAACTAGATGCACTTCTCAT 59.133 41.667 0.00 0.00 0.00 2.90
5458 6986 5.349817 CACGAAACTAGATGCACTTCTCATT 59.650 40.000 0.00 0.00 0.00 2.57
5459 6987 5.934625 ACGAAACTAGATGCACTTCTCATTT 59.065 36.000 0.00 0.00 0.00 2.32
5460 6988 7.063426 CACGAAACTAGATGCACTTCTCATTTA 59.937 37.037 0.00 0.00 0.00 1.40
5461 6989 7.766278 ACGAAACTAGATGCACTTCTCATTTAT 59.234 33.333 0.00 0.00 0.00 1.40
5462 6990 9.249457 CGAAACTAGATGCACTTCTCATTTATA 57.751 33.333 0.00 0.00 0.00 0.98
5464 6992 8.894768 AACTAGATGCACTTCTCATTTATACC 57.105 34.615 0.00 0.00 0.00 2.73
5465 6993 8.023021 ACTAGATGCACTTCTCATTTATACCA 57.977 34.615 0.00 0.00 0.00 3.25
5466 6994 8.654997 ACTAGATGCACTTCTCATTTATACCAT 58.345 33.333 0.00 0.00 0.00 3.55
5467 6995 7.976135 AGATGCACTTCTCATTTATACCATC 57.024 36.000 0.00 0.00 0.00 3.51
5468 6996 7.512130 AGATGCACTTCTCATTTATACCATCA 58.488 34.615 0.00 0.00 0.00 3.07
5469 6997 7.994911 AGATGCACTTCTCATTTATACCATCAA 59.005 33.333 0.00 0.00 0.00 2.57
5470 6998 7.558161 TGCACTTCTCATTTATACCATCAAG 57.442 36.000 0.00 0.00 0.00 3.02
5471 6999 6.038603 TGCACTTCTCATTTATACCATCAAGC 59.961 38.462 0.00 0.00 0.00 4.01
5472 7000 6.261826 GCACTTCTCATTTATACCATCAAGCT 59.738 38.462 0.00 0.00 0.00 3.74
5473 7001 7.442364 GCACTTCTCATTTATACCATCAAGCTA 59.558 37.037 0.00 0.00 0.00 3.32
5474 7002 8.986847 CACTTCTCATTTATACCATCAAGCTAG 58.013 37.037 0.00 0.00 0.00 3.42
5475 7003 8.709308 ACTTCTCATTTATACCATCAAGCTAGT 58.291 33.333 0.00 0.00 0.00 2.57
5476 7004 9.202273 CTTCTCATTTATACCATCAAGCTAGTC 57.798 37.037 0.00 0.00 0.00 2.59
5477 7005 8.250143 TCTCATTTATACCATCAAGCTAGTCA 57.750 34.615 0.00 0.00 0.00 3.41
5478 7006 8.704668 TCTCATTTATACCATCAAGCTAGTCAA 58.295 33.333 0.00 0.00 0.00 3.18
5479 7007 9.499479 CTCATTTATACCATCAAGCTAGTCAAT 57.501 33.333 0.00 0.00 0.00 2.57
5480 7008 9.276590 TCATTTATACCATCAAGCTAGTCAATG 57.723 33.333 0.00 0.00 0.00 2.82
5481 7009 9.276590 CATTTATACCATCAAGCTAGTCAATGA 57.723 33.333 0.00 0.00 0.00 2.57
5482 7010 8.662781 TTTATACCATCAAGCTAGTCAATGAC 57.337 34.615 5.02 5.02 0.00 3.06
5483 7011 4.558226 ACCATCAAGCTAGTCAATGACA 57.442 40.909 16.38 1.00 34.60 3.58
5484 7012 5.108187 ACCATCAAGCTAGTCAATGACAT 57.892 39.130 16.38 3.57 34.60 3.06
5485 7013 4.880120 ACCATCAAGCTAGTCAATGACATG 59.120 41.667 16.38 8.19 34.60 3.21
5486 7014 4.880120 CCATCAAGCTAGTCAATGACATGT 59.120 41.667 16.38 0.00 34.60 3.21
5487 7015 5.220796 CCATCAAGCTAGTCAATGACATGTG 60.221 44.000 16.38 6.25 34.60 3.21
5488 7016 4.256110 TCAAGCTAGTCAATGACATGTGG 58.744 43.478 16.38 0.00 34.60 4.17
5489 7017 3.272574 AGCTAGTCAATGACATGTGGG 57.727 47.619 16.38 0.37 34.60 4.61
5490 7018 2.092753 AGCTAGTCAATGACATGTGGGG 60.093 50.000 16.38 0.00 34.60 4.96
5491 7019 2.356125 GCTAGTCAATGACATGTGGGGT 60.356 50.000 16.38 0.00 34.60 4.95
5492 7020 2.496899 AGTCAATGACATGTGGGGTC 57.503 50.000 16.38 0.00 34.60 4.46
5493 7021 1.988107 AGTCAATGACATGTGGGGTCT 59.012 47.619 16.38 0.00 36.26 3.85
5494 7022 2.086869 GTCAATGACATGTGGGGTCTG 58.913 52.381 1.15 0.00 36.26 3.51
5495 7023 1.004628 TCAATGACATGTGGGGTCTGG 59.995 52.381 1.15 0.00 36.26 3.86
5496 7024 0.332632 AATGACATGTGGGGTCTGGG 59.667 55.000 1.15 0.00 36.26 4.45
5497 7025 1.574526 ATGACATGTGGGGTCTGGGG 61.575 60.000 1.15 0.00 36.26 4.96
5498 7026 2.121506 ACATGTGGGGTCTGGGGT 60.122 61.111 0.00 0.00 0.00 4.95
5499 7027 2.198304 GACATGTGGGGTCTGGGGTC 62.198 65.000 1.15 0.00 32.54 4.46
5500 7028 1.925455 CATGTGGGGTCTGGGGTCT 60.925 63.158 0.00 0.00 0.00 3.85
5501 7029 1.925455 ATGTGGGGTCTGGGGTCTG 60.925 63.158 0.00 0.00 0.00 3.51
5502 7030 3.330720 GTGGGGTCTGGGGTCTGG 61.331 72.222 0.00 0.00 0.00 3.86
5503 7031 3.869934 TGGGGTCTGGGGTCTGGT 61.870 66.667 0.00 0.00 0.00 4.00
5504 7032 3.009714 GGGGTCTGGGGTCTGGTC 61.010 72.222 0.00 0.00 0.00 4.02
5505 7033 3.009714 GGGTCTGGGGTCTGGTCC 61.010 72.222 0.00 0.00 0.00 4.46
5506 7034 2.122954 GGTCTGGGGTCTGGTCCT 59.877 66.667 0.00 0.00 0.00 3.85
5507 7035 2.294078 GGTCTGGGGTCTGGTCCTG 61.294 68.421 0.00 0.00 0.00 3.86
5508 7036 1.536662 GTCTGGGGTCTGGTCCTGT 60.537 63.158 0.00 0.00 0.00 4.00
5509 7037 0.252103 GTCTGGGGTCTGGTCCTGTA 60.252 60.000 0.00 0.00 0.00 2.74
5510 7038 0.716591 TCTGGGGTCTGGTCCTGTAT 59.283 55.000 0.00 0.00 0.00 2.29
5511 7039 0.833287 CTGGGGTCTGGTCCTGTATG 59.167 60.000 0.00 0.00 0.00 2.39
5512 7040 0.118346 TGGGGTCTGGTCCTGTATGT 59.882 55.000 0.00 0.00 0.00 2.29
5513 7041 0.831307 GGGGTCTGGTCCTGTATGTC 59.169 60.000 0.00 0.00 0.00 3.06
5514 7042 1.568504 GGGTCTGGTCCTGTATGTCA 58.431 55.000 0.00 0.00 0.00 3.58
5515 7043 2.119495 GGGTCTGGTCCTGTATGTCAT 58.881 52.381 0.00 0.00 0.00 3.06
5516 7044 2.505819 GGGTCTGGTCCTGTATGTCATT 59.494 50.000 0.00 0.00 0.00 2.57
5517 7045 3.535561 GGTCTGGTCCTGTATGTCATTG 58.464 50.000 0.00 0.00 0.00 2.82
5518 7046 3.197766 GGTCTGGTCCTGTATGTCATTGA 59.802 47.826 0.00 0.00 0.00 2.57
5519 7047 4.141620 GGTCTGGTCCTGTATGTCATTGAT 60.142 45.833 0.00 0.00 0.00 2.57
5520 7048 4.813161 GTCTGGTCCTGTATGTCATTGATG 59.187 45.833 0.00 0.00 0.00 3.07
5521 7049 4.471025 TCTGGTCCTGTATGTCATTGATGT 59.529 41.667 0.00 0.00 0.00 3.06
5522 7050 5.660864 TCTGGTCCTGTATGTCATTGATGTA 59.339 40.000 0.00 0.00 0.00 2.29
5523 7051 6.327365 TCTGGTCCTGTATGTCATTGATGTAT 59.673 38.462 0.00 0.00 0.00 2.29
5524 7052 6.290605 TGGTCCTGTATGTCATTGATGTATG 58.709 40.000 0.00 0.00 0.00 2.39
5525 7053 6.126796 TGGTCCTGTATGTCATTGATGTATGT 60.127 38.462 0.00 0.00 0.00 2.29
5526 7054 6.767902 GGTCCTGTATGTCATTGATGTATGTT 59.232 38.462 0.00 0.00 0.00 2.71
5527 7055 7.254898 GGTCCTGTATGTCATTGATGTATGTTG 60.255 40.741 0.00 0.00 0.00 3.33
5528 7056 7.495606 GTCCTGTATGTCATTGATGTATGTTGA 59.504 37.037 0.00 0.00 0.00 3.18
5529 7057 8.212995 TCCTGTATGTCATTGATGTATGTTGAT 58.787 33.333 0.00 0.00 0.00 2.57
5530 7058 8.287503 CCTGTATGTCATTGATGTATGTTGATG 58.712 37.037 0.00 0.00 0.00 3.07
5531 7059 8.156994 TGTATGTCATTGATGTATGTTGATGG 57.843 34.615 0.00 0.00 0.00 3.51
5532 7060 7.774625 TGTATGTCATTGATGTATGTTGATGGT 59.225 33.333 0.00 0.00 0.00 3.55
5533 7061 9.271828 GTATGTCATTGATGTATGTTGATGGTA 57.728 33.333 0.00 0.00 0.00 3.25
5534 7062 8.929260 ATGTCATTGATGTATGTTGATGGTAT 57.071 30.769 0.00 0.00 0.00 2.73
5536 7064 9.844257 TGTCATTGATGTATGTTGATGGTATAA 57.156 29.630 0.00 0.00 0.00 0.98
5547 7075 7.320443 TGTTGATGGTATAAATGAGAAGTGC 57.680 36.000 0.00 0.00 0.00 4.40
5548 7076 6.883756 TGTTGATGGTATAAATGAGAAGTGCA 59.116 34.615 0.00 0.00 0.00 4.57
5549 7077 6.925610 TGATGGTATAAATGAGAAGTGCAC 57.074 37.500 9.40 9.40 0.00 4.57
5550 7078 5.822519 TGATGGTATAAATGAGAAGTGCACC 59.177 40.000 14.63 0.00 0.00 5.01
5551 7079 4.523083 TGGTATAAATGAGAAGTGCACCC 58.477 43.478 14.63 5.93 0.00 4.61
5552 7080 3.560068 GGTATAAATGAGAAGTGCACCCG 59.440 47.826 14.63 0.00 0.00 5.28
5553 7081 3.627395 ATAAATGAGAAGTGCACCCGA 57.373 42.857 14.63 0.00 0.00 5.14
5554 7082 1.523758 AAATGAGAAGTGCACCCGAC 58.476 50.000 14.63 3.98 0.00 4.79
5555 7083 0.670546 AATGAGAAGTGCACCCGACG 60.671 55.000 14.63 0.00 0.00 5.12
5556 7084 1.816863 ATGAGAAGTGCACCCGACGT 61.817 55.000 14.63 1.90 0.00 4.34
5557 7085 2.022129 GAGAAGTGCACCCGACGTG 61.022 63.158 14.63 0.00 46.03 4.49
5558 7086 3.041940 GAAGTGCACCCGACGTGG 61.042 66.667 14.63 0.00 43.24 4.94
5559 7087 3.802418 GAAGTGCACCCGACGTGGT 62.802 63.158 14.63 0.00 43.24 4.16
5565 7093 2.975536 ACCCGACGTGGTGGTATG 59.024 61.111 8.56 0.00 37.20 2.39
5566 7094 2.185867 CCCGACGTGGTGGTATGG 59.814 66.667 0.00 0.00 35.15 2.74
5567 7095 2.652095 CCCGACGTGGTGGTATGGT 61.652 63.158 0.00 0.00 35.15 3.55
5568 7096 1.294138 CCGACGTGGTGGTATGGTT 59.706 57.895 0.00 0.00 0.00 3.67
5569 7097 1.017177 CCGACGTGGTGGTATGGTTG 61.017 60.000 0.00 0.00 0.00 3.77
5570 7098 1.017177 CGACGTGGTGGTATGGTTGG 61.017 60.000 0.00 0.00 0.00 3.77
5571 7099 0.322322 GACGTGGTGGTATGGTTGGA 59.678 55.000 0.00 0.00 0.00 3.53
5572 7100 0.766131 ACGTGGTGGTATGGTTGGAA 59.234 50.000 0.00 0.00 0.00 3.53
5573 7101 1.353022 ACGTGGTGGTATGGTTGGAAT 59.647 47.619 0.00 0.00 0.00 3.01
5574 7102 2.572556 ACGTGGTGGTATGGTTGGAATA 59.427 45.455 0.00 0.00 0.00 1.75
5575 7103 3.201266 ACGTGGTGGTATGGTTGGAATAT 59.799 43.478 0.00 0.00 0.00 1.28
5576 7104 4.204012 CGTGGTGGTATGGTTGGAATATT 58.796 43.478 0.00 0.00 0.00 1.28
5577 7105 4.642885 CGTGGTGGTATGGTTGGAATATTT 59.357 41.667 0.00 0.00 0.00 1.40
5578 7106 5.126384 CGTGGTGGTATGGTTGGAATATTTT 59.874 40.000 0.00 0.00 0.00 1.82
5579 7107 6.319152 CGTGGTGGTATGGTTGGAATATTTTA 59.681 38.462 0.00 0.00 0.00 1.52
5580 7108 7.148052 CGTGGTGGTATGGTTGGAATATTTTAA 60.148 37.037 0.00 0.00 0.00 1.52
5581 7109 8.532819 GTGGTGGTATGGTTGGAATATTTTAAA 58.467 33.333 0.00 0.00 0.00 1.52
5582 7110 9.101325 TGGTGGTATGGTTGGAATATTTTAAAA 57.899 29.630 2.51 2.51 0.00 1.52
5583 7111 9.945904 GGTGGTATGGTTGGAATATTTTAAAAA 57.054 29.630 4.44 0.00 0.00 1.94
5607 7135 6.380095 AAAAATTAGTACAACCGTGCTTCA 57.620 33.333 0.00 0.00 39.08 3.02
5608 7136 6.569179 AAAATTAGTACAACCGTGCTTCAT 57.431 33.333 0.00 0.00 39.08 2.57
5609 7137 5.545658 AATTAGTACAACCGTGCTTCATG 57.454 39.130 0.00 0.00 39.08 3.07
5610 7138 2.543777 AGTACAACCGTGCTTCATGT 57.456 45.000 0.00 0.00 33.88 3.21
5611 7139 2.846193 AGTACAACCGTGCTTCATGTT 58.154 42.857 0.00 0.00 33.88 2.71
5612 7140 3.997762 AGTACAACCGTGCTTCATGTTA 58.002 40.909 0.00 0.00 33.88 2.41
5613 7141 4.575885 AGTACAACCGTGCTTCATGTTAT 58.424 39.130 0.00 0.00 33.88 1.89
5614 7142 3.829886 ACAACCGTGCTTCATGTTATG 57.170 42.857 0.00 0.00 0.00 1.90
5615 7143 3.407698 ACAACCGTGCTTCATGTTATGA 58.592 40.909 0.00 0.00 37.55 2.15
5616 7144 3.188460 ACAACCGTGCTTCATGTTATGAC 59.812 43.478 0.00 0.00 39.39 3.06
5617 7145 3.052455 ACCGTGCTTCATGTTATGACA 57.948 42.857 0.00 0.00 39.39 3.58
5619 7147 4.765273 ACCGTGCTTCATGTTATGACATA 58.235 39.130 2.35 0.00 44.55 2.29
5620 7148 5.368145 ACCGTGCTTCATGTTATGACATAT 58.632 37.500 2.35 0.00 44.55 1.78
5621 7149 6.521162 ACCGTGCTTCATGTTATGACATATA 58.479 36.000 2.35 0.00 44.55 0.86
5622 7150 7.161404 ACCGTGCTTCATGTTATGACATATAT 58.839 34.615 2.35 0.00 44.55 0.86
5623 7151 7.118245 ACCGTGCTTCATGTTATGACATATATG 59.882 37.037 11.29 11.29 44.55 1.78
5624 7152 7.118245 CCGTGCTTCATGTTATGACATATATGT 59.882 37.037 18.31 18.31 44.55 2.29
5625 7153 9.139174 CGTGCTTCATGTTATGACATATATGTA 57.861 33.333 18.28 7.73 44.55 2.29
5628 7156 9.926751 GCTTCATGTTATGACATATATGTATGC 57.073 33.333 18.28 9.33 44.55 3.14
5630 7158 9.956640 TTCATGTTATGACATATATGTATGCCA 57.043 29.630 18.28 12.14 44.55 4.92
5631 7159 9.956640 TCATGTTATGACATATATGTATGCCAA 57.043 29.630 18.28 6.14 44.55 4.52
5633 7161 9.964354 ATGTTATGACATATATGTATGCCAAGT 57.036 29.630 18.28 1.80 44.51 3.16
5634 7162 9.218440 TGTTATGACATATATGTATGCCAAGTG 57.782 33.333 18.28 0.00 41.95 3.16
5635 7163 9.219603 GTTATGACATATATGTATGCCAAGTGT 57.780 33.333 18.28 0.85 41.95 3.55
5695 7225 9.382244 GTATATAAATCCAGATTGCGTTTGAAC 57.618 33.333 0.00 0.00 0.00 3.18
5702 7232 4.539870 CAGATTGCGTTTGAACTTGACAT 58.460 39.130 0.00 0.00 0.00 3.06
5703 7233 4.380678 CAGATTGCGTTTGAACTTGACATG 59.619 41.667 0.00 0.00 0.00 3.21
6172 7709 3.902881 AAAGCACAAAAATGTGGGACA 57.097 38.095 10.62 0.00 39.97 4.02
6873 8410 6.360370 AGCTACTAATCAAACTGACTCCAA 57.640 37.500 0.00 0.00 0.00 3.53
6879 8416 2.838736 TCAAACTGACTCCAACAGCTC 58.161 47.619 0.00 0.00 38.74 4.09
6986 8523 7.404104 AGGATTGATGGCTCTATATCCATGTAA 59.596 37.037 0.00 0.00 42.74 2.41
7129 8666 1.075601 TTTGCTGGGAGGGTCAGAAT 58.924 50.000 0.00 0.00 34.36 2.40
7250 8793 8.821147 TGAATGTATGTAGACACGTTTTAGTT 57.179 30.769 0.00 0.00 30.52 2.24
7350 8895 9.036980 CAAAGGGAGTAGTATATGTTATAGCCT 57.963 37.037 0.00 0.00 0.00 4.58
7363 8908 5.962433 TGTTATAGCCTAGTGTTGTGTCTC 58.038 41.667 0.00 0.00 0.00 3.36
7364 8909 5.105473 TGTTATAGCCTAGTGTTGTGTCTCC 60.105 44.000 0.00 0.00 0.00 3.71
7365 8910 0.603569 AGCCTAGTGTTGTGTCTCCG 59.396 55.000 0.00 0.00 0.00 4.63
7366 8911 1.014564 GCCTAGTGTTGTGTCTCCGC 61.015 60.000 0.00 0.00 0.00 5.54
7367 8912 0.389948 CCTAGTGTTGTGTCTCCGCC 60.390 60.000 0.00 0.00 0.00 6.13
7412 8957 0.877071 CTGGTCCTCATTGCACACAC 59.123 55.000 0.00 0.00 0.00 3.82
7438 8985 4.331968 GTTGGATTCATGTGTTCCTGGTA 58.668 43.478 10.99 0.00 0.00 3.25
7524 9081 5.640147 TGGGGACAATTGACTGAATTTAGT 58.360 37.500 13.59 1.93 37.44 2.24
7535 9092 7.252612 TGACTGAATTTAGTATCTGGGTCAA 57.747 36.000 2.38 0.00 0.00 3.18
7537 9094 7.987458 TGACTGAATTTAGTATCTGGGTCAATC 59.013 37.037 2.38 0.00 0.00 2.67
7538 9095 6.986817 ACTGAATTTAGTATCTGGGTCAATCG 59.013 38.462 0.14 0.00 0.00 3.34
7540 9097 7.735917 TGAATTTAGTATCTGGGTCAATCGAT 58.264 34.615 0.00 0.00 0.00 3.59
7573 9130 2.287308 CGTTGAATGGAAAAGCAACCGA 60.287 45.455 0.00 0.00 37.83 4.69
7583 9141 2.839486 AAGCAACCGACAGATCTTCA 57.161 45.000 0.00 0.00 0.00 3.02
7584 9142 3.340814 AAGCAACCGACAGATCTTCAT 57.659 42.857 0.00 0.00 0.00 2.57
7585 9143 2.625737 AGCAACCGACAGATCTTCATG 58.374 47.619 0.00 0.00 0.00 3.07
7586 9144 1.667724 GCAACCGACAGATCTTCATGG 59.332 52.381 0.00 0.00 0.00 3.66
7587 9145 2.677902 GCAACCGACAGATCTTCATGGA 60.678 50.000 0.00 0.00 0.00 3.41
7588 9146 3.599343 CAACCGACAGATCTTCATGGAA 58.401 45.455 0.00 0.00 0.00 3.53
7608 9173 4.455877 GGAACATTGTTCATCGTCTTCCTT 59.544 41.667 26.27 0.00 0.00 3.36
7615 9180 0.103208 CATCGTCTTCCTTCTCCCGG 59.897 60.000 0.00 0.00 0.00 5.73
7619 9184 1.686110 TCTTCCTTCTCCCGGCCTC 60.686 63.158 0.00 0.00 0.00 4.70
7632 9197 2.496817 GCCTCGATCTGAACCGCT 59.503 61.111 0.00 0.00 0.00 5.52
7681 9246 3.202001 CGCCCGCGGATTGTTCAT 61.202 61.111 30.73 0.00 35.56 2.57
7682 9247 2.760159 CGCCCGCGGATTGTTCATT 61.760 57.895 30.73 0.00 35.56 2.57
7683 9248 1.226660 GCCCGCGGATTGTTCATTG 60.227 57.895 30.73 6.52 0.00 2.82
7684 9249 1.933115 GCCCGCGGATTGTTCATTGT 61.933 55.000 30.73 0.00 0.00 2.71
7685 9250 0.098728 CCCGCGGATTGTTCATTGTC 59.901 55.000 30.73 0.00 0.00 3.18
7686 9251 1.086696 CCGCGGATTGTTCATTGTCT 58.913 50.000 24.07 0.00 0.00 3.41
7687 9252 1.468520 CCGCGGATTGTTCATTGTCTT 59.531 47.619 24.07 0.00 0.00 3.01
7688 9253 2.476185 CCGCGGATTGTTCATTGTCTTC 60.476 50.000 24.07 0.00 0.00 2.87
7689 9254 2.476185 CGCGGATTGTTCATTGTCTTCC 60.476 50.000 0.00 0.00 0.00 3.46
7690 9255 2.749621 GCGGATTGTTCATTGTCTTCCT 59.250 45.455 0.00 0.00 0.00 3.36
7691 9256 3.191371 GCGGATTGTTCATTGTCTTCCTT 59.809 43.478 0.00 0.00 0.00 3.36
7692 9257 4.672801 GCGGATTGTTCATTGTCTTCCTTC 60.673 45.833 0.00 0.00 0.00 3.46
7693 9258 4.697352 CGGATTGTTCATTGTCTTCCTTCT 59.303 41.667 0.00 0.00 0.00 2.85
7694 9259 5.163814 CGGATTGTTCATTGTCTTCCTTCTC 60.164 44.000 0.00 0.00 0.00 2.87
7695 9260 5.124617 GGATTGTTCATTGTCTTCCTTCTCC 59.875 44.000 0.00 0.00 0.00 3.71
7696 9261 4.982241 TGTTCATTGTCTTCCTTCTCCT 57.018 40.909 0.00 0.00 0.00 3.69
7697 9262 4.645535 TGTTCATTGTCTTCCTTCTCCTG 58.354 43.478 0.00 0.00 0.00 3.86
7698 9263 4.347876 TGTTCATTGTCTTCCTTCTCCTGA 59.652 41.667 0.00 0.00 0.00 3.86
7699 9264 4.543590 TCATTGTCTTCCTTCTCCTGAC 57.456 45.455 0.00 0.00 0.00 3.51
7700 9265 3.261897 TCATTGTCTTCCTTCTCCTGACC 59.738 47.826 0.00 0.00 0.00 4.02
7701 9266 2.704190 TGTCTTCCTTCTCCTGACCT 57.296 50.000 0.00 0.00 0.00 3.85
7702 9267 2.530701 TGTCTTCCTTCTCCTGACCTC 58.469 52.381 0.00 0.00 0.00 3.85
7703 9268 1.474879 GTCTTCCTTCTCCTGACCTCG 59.525 57.143 0.00 0.00 0.00 4.63
7704 9269 1.354705 TCTTCCTTCTCCTGACCTCGA 59.645 52.381 0.00 0.00 0.00 4.04
7705 9270 2.024846 TCTTCCTTCTCCTGACCTCGAT 60.025 50.000 0.00 0.00 0.00 3.59
7706 9271 2.060050 TCCTTCTCCTGACCTCGATC 57.940 55.000 0.00 0.00 0.00 3.69
7707 9272 1.566703 TCCTTCTCCTGACCTCGATCT 59.433 52.381 0.00 0.00 0.00 2.75
7708 9273 1.680735 CCTTCTCCTGACCTCGATCTG 59.319 57.143 0.00 0.00 0.00 2.90
7709 9274 2.649190 CTTCTCCTGACCTCGATCTGA 58.351 52.381 0.00 0.00 0.00 3.27
7710 9275 2.808906 TCTCCTGACCTCGATCTGAA 57.191 50.000 0.00 0.00 0.00 3.02
7711 9276 2.370349 TCTCCTGACCTCGATCTGAAC 58.630 52.381 0.00 0.00 0.00 3.18
7712 9277 1.407258 CTCCTGACCTCGATCTGAACC 59.593 57.143 0.00 0.00 0.00 3.62
7713 9278 0.101399 CCTGACCTCGATCTGAACCG 59.899 60.000 0.00 0.00 0.00 4.44
7714 9279 0.526524 CTGACCTCGATCTGAACCGC 60.527 60.000 0.00 0.00 0.00 5.68
7715 9280 0.965866 TGACCTCGATCTGAACCGCT 60.966 55.000 0.00 0.00 0.00 5.52
7716 9281 0.248702 GACCTCGATCTGAACCGCTC 60.249 60.000 0.00 0.00 0.00 5.03
7717 9282 0.965866 ACCTCGATCTGAACCGCTCA 60.966 55.000 0.00 0.00 0.00 4.26
7718 9283 0.526524 CCTCGATCTGAACCGCTCAC 60.527 60.000 0.00 0.00 0.00 3.51
7719 9284 0.171231 CTCGATCTGAACCGCTCACA 59.829 55.000 0.00 0.00 0.00 3.58
7720 9285 0.601057 TCGATCTGAACCGCTCACAA 59.399 50.000 0.00 0.00 0.00 3.33
7721 9286 0.716108 CGATCTGAACCGCTCACAAC 59.284 55.000 0.00 0.00 0.00 3.32
7722 9287 1.079503 GATCTGAACCGCTCACAACC 58.920 55.000 0.00 0.00 0.00 3.77
7723 9288 0.670546 ATCTGAACCGCTCACAACCG 60.671 55.000 0.00 0.00 0.00 4.44
7724 9289 1.594293 CTGAACCGCTCACAACCGT 60.594 57.895 0.00 0.00 0.00 4.83
7725 9290 1.557443 CTGAACCGCTCACAACCGTC 61.557 60.000 0.00 0.00 0.00 4.79
7726 9291 2.654912 GAACCGCTCACAACCGTCG 61.655 63.158 0.00 0.00 0.00 5.12
7727 9292 4.657824 ACCGCTCACAACCGTCGG 62.658 66.667 10.48 10.48 45.04 4.79
7728 9293 4.657824 CCGCTCACAACCGTCGGT 62.658 66.667 12.23 12.23 37.65 4.69
7736 9301 4.129757 AACCGTCGGTTGAACCAC 57.870 55.556 28.36 10.49 45.07 4.16
7737 9302 1.524393 AACCGTCGGTTGAACCACC 60.524 57.895 28.36 2.65 45.07 4.61
7738 9303 1.974973 AACCGTCGGTTGAACCACCT 61.975 55.000 28.36 0.72 45.07 4.00
7739 9304 1.959226 CCGTCGGTTGAACCACCTG 60.959 63.158 15.58 0.00 38.47 4.00
7740 9305 2.604174 CGTCGGTTGAACCACCTGC 61.604 63.158 15.58 0.00 38.47 4.85
7741 9306 2.112297 TCGGTTGAACCACCTGCC 59.888 61.111 15.58 0.00 38.47 4.85
7742 9307 2.113139 CGGTTGAACCACCTGCCT 59.887 61.111 15.58 0.00 38.47 4.75
7743 9308 1.122632 TCGGTTGAACCACCTGCCTA 61.123 55.000 15.58 0.00 38.47 3.93
7744 9309 0.953960 CGGTTGAACCACCTGCCTAC 60.954 60.000 15.58 0.00 38.47 3.18
7745 9310 0.953960 GGTTGAACCACCTGCCTACG 60.954 60.000 9.98 0.00 38.42 3.51
7746 9311 1.302192 TTGAACCACCTGCCTACGC 60.302 57.895 0.00 0.00 0.00 4.42
7747 9312 2.436115 GAACCACCTGCCTACGCC 60.436 66.667 0.00 0.00 0.00 5.68
7748 9313 4.388499 AACCACCTGCCTACGCCG 62.388 66.667 0.00 0.00 0.00 6.46
7773 9338 4.007644 CTGGTGGCGCTCCTGTGA 62.008 66.667 19.15 2.82 0.00 3.58
7774 9339 4.314440 TGGTGGCGCTCCTGTGAC 62.314 66.667 19.15 0.00 0.00 3.67
7776 9341 4.314440 GTGGCGCTCCTGTGACCA 62.314 66.667 7.64 0.00 0.00 4.02
7777 9342 4.314440 TGGCGCTCCTGTGACCAC 62.314 66.667 7.64 0.00 0.00 4.16
7779 9344 4.008933 GCGCTCCTGTGACCACCT 62.009 66.667 0.00 0.00 0.00 4.00
7780 9345 2.262915 CGCTCCTGTGACCACCTC 59.737 66.667 0.00 0.00 0.00 3.85
7781 9346 2.262915 GCTCCTGTGACCACCTCG 59.737 66.667 0.00 0.00 0.00 4.63
7782 9347 2.574955 GCTCCTGTGACCACCTCGT 61.575 63.158 0.00 0.00 0.00 4.18
7783 9348 1.587054 CTCCTGTGACCACCTCGTC 59.413 63.158 0.00 0.00 0.00 4.20
7784 9349 1.878656 CTCCTGTGACCACCTCGTCC 61.879 65.000 0.00 0.00 31.35 4.79
7785 9350 1.908793 CCTGTGACCACCTCGTCCT 60.909 63.158 0.00 0.00 31.35 3.85
7786 9351 1.587054 CTGTGACCACCTCGTCCTC 59.413 63.158 0.00 0.00 31.35 3.71
7787 9352 1.878656 CTGTGACCACCTCGTCCTCC 61.879 65.000 0.00 0.00 31.35 4.30
7788 9353 1.606889 GTGACCACCTCGTCCTCCT 60.607 63.158 0.00 0.00 31.35 3.69
7789 9354 1.304217 TGACCACCTCGTCCTCCTC 60.304 63.158 0.00 0.00 31.35 3.71
7790 9355 1.000646 GACCACCTCGTCCTCCTCT 60.001 63.158 0.00 0.00 0.00 3.69
7791 9356 1.000646 ACCACCTCGTCCTCCTCTC 60.001 63.158 0.00 0.00 0.00 3.20
7792 9357 1.000771 CCACCTCGTCCTCCTCTCA 60.001 63.158 0.00 0.00 0.00 3.27
7793 9358 0.612174 CCACCTCGTCCTCCTCTCAA 60.612 60.000 0.00 0.00 0.00 3.02
7794 9359 0.528470 CACCTCGTCCTCCTCTCAAC 59.472 60.000 0.00 0.00 0.00 3.18
7795 9360 0.612453 ACCTCGTCCTCCTCTCAACC 60.612 60.000 0.00 0.00 0.00 3.77
7796 9361 1.658686 CCTCGTCCTCCTCTCAACCG 61.659 65.000 0.00 0.00 0.00 4.44
7797 9362 0.961358 CTCGTCCTCCTCTCAACCGT 60.961 60.000 0.00 0.00 0.00 4.83
7798 9363 0.538977 TCGTCCTCCTCTCAACCGTT 60.539 55.000 0.00 0.00 0.00 4.44
7799 9364 0.388649 CGTCCTCCTCTCAACCGTTG 60.389 60.000 4.78 4.78 0.00 4.10
7800 9365 0.680061 GTCCTCCTCTCAACCGTTGT 59.320 55.000 11.01 0.00 0.00 3.32
7801 9366 0.679505 TCCTCCTCTCAACCGTTGTG 59.320 55.000 11.01 8.89 0.00 3.33
7802 9367 0.393077 CCTCCTCTCAACCGTTGTGT 59.607 55.000 11.01 0.00 0.00 3.72
7803 9368 1.202651 CCTCCTCTCAACCGTTGTGTT 60.203 52.381 11.01 0.00 0.00 3.32
7804 9369 1.867233 CTCCTCTCAACCGTTGTGTTG 59.133 52.381 11.01 6.63 45.51 3.33
7805 9370 0.307760 CCTCTCAACCGTTGTGTTGC 59.692 55.000 11.01 0.00 44.15 4.17
7806 9371 0.307760 CTCTCAACCGTTGTGTTGCC 59.692 55.000 11.01 0.00 44.15 4.52
7807 9372 0.393132 TCTCAACCGTTGTGTTGCCA 60.393 50.000 11.01 0.00 44.15 4.92
7808 9373 0.248458 CTCAACCGTTGTGTTGCCAC 60.248 55.000 11.01 0.00 44.15 5.01
7809 9374 1.226831 CAACCGTTGTGTTGCCACC 60.227 57.895 2.87 0.00 41.09 4.61
7810 9375 2.766400 AACCGTTGTGTTGCCACCG 61.766 57.895 0.00 0.00 41.09 4.94
7811 9376 4.622456 CCGTTGTGTTGCCACCGC 62.622 66.667 0.00 0.00 41.09 5.68
7812 9377 4.622456 CGTTGTGTTGCCACCGCC 62.622 66.667 0.00 0.00 41.09 6.13
7813 9378 4.279043 GTTGTGTTGCCACCGCCC 62.279 66.667 0.00 0.00 41.09 6.13
7814 9379 4.514585 TTGTGTTGCCACCGCCCT 62.515 61.111 0.00 0.00 41.09 5.19
7815 9380 4.947147 TGTGTTGCCACCGCCCTC 62.947 66.667 0.00 0.00 41.09 4.30
7822 9387 4.530857 CCACCGCCCTCGACCATC 62.531 72.222 0.00 0.00 38.10 3.51
7823 9388 4.530857 CACCGCCCTCGACCATCC 62.531 72.222 0.00 0.00 38.10 3.51
7826 9391 3.917760 CGCCCTCGACCATCCCTC 61.918 72.222 0.00 0.00 38.10 4.30
7827 9392 2.444895 GCCCTCGACCATCCCTCT 60.445 66.667 0.00 0.00 0.00 3.69
7828 9393 1.152525 GCCCTCGACCATCCCTCTA 60.153 63.158 0.00 0.00 0.00 2.43
7829 9394 0.759436 GCCCTCGACCATCCCTCTAA 60.759 60.000 0.00 0.00 0.00 2.10
7830 9395 1.041437 CCCTCGACCATCCCTCTAAC 58.959 60.000 0.00 0.00 0.00 2.34
7831 9396 1.041437 CCTCGACCATCCCTCTAACC 58.959 60.000 0.00 0.00 0.00 2.85
7832 9397 1.041437 CTCGACCATCCCTCTAACCC 58.959 60.000 0.00 0.00 0.00 4.11
7833 9398 0.398098 TCGACCATCCCTCTAACCCC 60.398 60.000 0.00 0.00 0.00 4.95
7834 9399 1.745320 CGACCATCCCTCTAACCCCG 61.745 65.000 0.00 0.00 0.00 5.73
7835 9400 1.384082 ACCATCCCTCTAACCCCGG 60.384 63.158 0.00 0.00 0.00 5.73
7836 9401 1.384082 CCATCCCTCTAACCCCGGT 60.384 63.158 0.00 0.00 0.00 5.28
7837 9402 1.696097 CCATCCCTCTAACCCCGGTG 61.696 65.000 0.00 0.00 0.00 4.94
7838 9403 0.689745 CATCCCTCTAACCCCGGTGA 60.690 60.000 0.00 0.00 0.00 4.02
7839 9404 0.267960 ATCCCTCTAACCCCGGTGAT 59.732 55.000 0.00 0.00 0.00 3.06
7840 9405 0.689745 TCCCTCTAACCCCGGTGATG 60.690 60.000 0.00 0.00 0.00 3.07
7841 9406 0.689745 CCCTCTAACCCCGGTGATGA 60.690 60.000 0.00 0.00 0.00 2.92
7842 9407 0.464452 CCTCTAACCCCGGTGATGAC 59.536 60.000 0.00 0.00 0.00 3.06
7843 9408 0.464452 CTCTAACCCCGGTGATGACC 59.536 60.000 0.00 0.00 39.14 4.02
7854 9419 2.470821 GGTGATGACCGGTTCTTATCG 58.529 52.381 9.42 0.00 30.61 2.92
7859 9424 2.809706 CCGGTTCTTATCGGGCGA 59.190 61.111 0.00 0.00 42.32 5.54
7860 9425 1.142314 CCGGTTCTTATCGGGCGAA 59.858 57.895 0.00 0.00 42.32 4.70
7861 9426 1.149964 CCGGTTCTTATCGGGCGAAC 61.150 60.000 0.00 0.00 42.32 3.95
7862 9427 0.458889 CGGTTCTTATCGGGCGAACA 60.459 55.000 0.00 0.00 38.94 3.18
7863 9428 1.805120 CGGTTCTTATCGGGCGAACAT 60.805 52.381 0.00 0.00 38.94 2.71
7864 9429 1.597663 GGTTCTTATCGGGCGAACATG 59.402 52.381 0.00 0.00 38.94 3.21
7865 9430 1.003866 GTTCTTATCGGGCGAACATGC 60.004 52.381 0.00 0.00 37.55 4.06
7866 9431 0.176910 TCTTATCGGGCGAACATGCA 59.823 50.000 0.00 0.00 36.28 3.96
7867 9432 1.202639 TCTTATCGGGCGAACATGCAT 60.203 47.619 0.00 0.00 36.28 3.96
7868 9433 1.195448 CTTATCGGGCGAACATGCATC 59.805 52.381 0.00 0.00 36.28 3.91
7869 9434 0.392706 TATCGGGCGAACATGCATCT 59.607 50.000 0.00 0.00 36.28 2.90
7870 9435 0.464373 ATCGGGCGAACATGCATCTT 60.464 50.000 0.00 0.00 36.28 2.40
7871 9436 1.089481 TCGGGCGAACATGCATCTTC 61.089 55.000 4.73 4.73 36.28 2.87
7872 9437 1.729881 GGGCGAACATGCATCTTCC 59.270 57.895 8.86 2.73 36.28 3.46
7873 9438 1.728490 GGGCGAACATGCATCTTCCC 61.728 60.000 8.86 10.26 36.28 3.97
7874 9439 0.749454 GGCGAACATGCATCTTCCCT 60.749 55.000 8.86 0.00 36.28 4.20
7875 9440 0.659957 GCGAACATGCATCTTCCCTC 59.340 55.000 8.86 0.00 34.15 4.30
7876 9441 2.013563 GCGAACATGCATCTTCCCTCA 61.014 52.381 8.86 0.00 34.15 3.86
7877 9442 2.569059 CGAACATGCATCTTCCCTCAT 58.431 47.619 8.86 0.00 0.00 2.90
7878 9443 2.547211 CGAACATGCATCTTCCCTCATC 59.453 50.000 8.86 0.00 0.00 2.92
7879 9444 2.653234 ACATGCATCTTCCCTCATCC 57.347 50.000 0.00 0.00 0.00 3.51
7880 9445 1.144503 ACATGCATCTTCCCTCATCCC 59.855 52.381 0.00 0.00 0.00 3.85
7881 9446 0.776176 ATGCATCTTCCCTCATCCCC 59.224 55.000 0.00 0.00 0.00 4.81
7882 9447 0.624206 TGCATCTTCCCTCATCCCCA 60.624 55.000 0.00 0.00 0.00 4.96
7883 9448 0.179006 GCATCTTCCCTCATCCCCAC 60.179 60.000 0.00 0.00 0.00 4.61
7884 9449 1.216064 CATCTTCCCTCATCCCCACA 58.784 55.000 0.00 0.00 0.00 4.17
7885 9450 1.133976 CATCTTCCCTCATCCCCACAC 60.134 57.143 0.00 0.00 0.00 3.82
7886 9451 0.178876 TCTTCCCTCATCCCCACACA 60.179 55.000 0.00 0.00 0.00 3.72
7887 9452 0.035056 CTTCCCTCATCCCCACACAC 60.035 60.000 0.00 0.00 0.00 3.82
7888 9453 0.770166 TTCCCTCATCCCCACACACA 60.770 55.000 0.00 0.00 0.00 3.72
7889 9454 1.002134 CCCTCATCCCCACACACAC 60.002 63.158 0.00 0.00 0.00 3.82
7890 9455 1.492133 CCCTCATCCCCACACACACT 61.492 60.000 0.00 0.00 0.00 3.55
7891 9456 1.275666 CCTCATCCCCACACACACTA 58.724 55.000 0.00 0.00 0.00 2.74
7892 9457 1.628340 CCTCATCCCCACACACACTAA 59.372 52.381 0.00 0.00 0.00 2.24
7893 9458 2.355108 CCTCATCCCCACACACACTAAG 60.355 54.545 0.00 0.00 0.00 2.18
7894 9459 2.567169 CTCATCCCCACACACACTAAGA 59.433 50.000 0.00 0.00 0.00 2.10
7895 9460 3.181329 TCATCCCCACACACACTAAGAT 58.819 45.455 0.00 0.00 0.00 2.40
7896 9461 4.358214 TCATCCCCACACACACTAAGATA 58.642 43.478 0.00 0.00 0.00 1.98
7897 9462 4.405680 TCATCCCCACACACACTAAGATAG 59.594 45.833 0.00 0.00 0.00 2.08
7898 9463 4.055710 TCCCCACACACACTAAGATAGA 57.944 45.455 0.00 0.00 0.00 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 101 2.352814 CCAGATTTCTCCTGTTCGTCGT 60.353 50.000 0.00 0.00 0.00 4.34
115 116 2.486716 CCTCCCCTCTCTTTCCAGATT 58.513 52.381 0.00 0.00 0.00 2.40
136 138 2.811317 CTCGTCCAAGCTCACGCC 60.811 66.667 7.72 0.00 35.93 5.68
178 188 7.090173 TCATCCAATCGTTTTCCTTTCATTTC 58.910 34.615 0.00 0.00 0.00 2.17
187 197 3.699067 CAGCATCATCCAATCGTTTTCC 58.301 45.455 0.00 0.00 0.00 3.13
388 1309 3.000277 CGATTGAAATCAGACTGCGAGTC 60.000 47.826 0.00 7.88 45.38 3.36
389 1310 2.926200 CGATTGAAATCAGACTGCGAGT 59.074 45.455 0.00 0.00 35.11 4.18
390 1311 3.182182 TCGATTGAAATCAGACTGCGAG 58.818 45.455 0.00 0.00 35.11 5.03
391 1312 3.230743 TCGATTGAAATCAGACTGCGA 57.769 42.857 0.00 0.00 35.11 5.10
392 1313 4.512657 GAATCGATTGAAATCAGACTGCG 58.487 43.478 16.96 0.00 35.11 5.18
968 1895 0.441533 CAGCAGCACAAAGTAGAGCG 59.558 55.000 0.00 0.00 0.00 5.03
1161 2275 1.199789 CGCCAAGCAGAACAAATAGCA 59.800 47.619 0.00 0.00 0.00 3.49
1162 2276 1.200020 ACGCCAAGCAGAACAAATAGC 59.800 47.619 0.00 0.00 0.00 2.97
1163 2277 3.236816 CAACGCCAAGCAGAACAAATAG 58.763 45.455 0.00 0.00 0.00 1.73
1164 2278 2.621055 ACAACGCCAAGCAGAACAAATA 59.379 40.909 0.00 0.00 0.00 1.40
1165 2279 1.408702 ACAACGCCAAGCAGAACAAAT 59.591 42.857 0.00 0.00 0.00 2.32
1230 2344 0.035630 CCTGCATAGCCATAGCCTCC 60.036 60.000 0.00 0.00 41.25 4.30
1261 2375 2.557924 TCTGCAAAGTGCCTTGGTTATG 59.442 45.455 0.00 0.00 44.23 1.90
1354 2469 2.595750 TCCCCATCCGTTTCAAACAT 57.404 45.000 0.22 0.00 0.00 2.71
1401 2522 8.258708 GCTTAGGATCTCTTTAACAAGGAGTAA 58.741 37.037 0.00 0.00 0.00 2.24
1422 2543 5.220931 GGATACAGTTTGCCATCTTGCTTAG 60.221 44.000 0.00 0.00 0.00 2.18
1505 2626 0.534877 ATCGCAACTTGCCACAGTCA 60.535 50.000 8.20 0.00 41.12 3.41
1676 2801 5.382573 TTTTGCTTGCAAAAACGTCATAC 57.617 34.783 25.19 0.00 31.90 2.39
1727 2852 2.838693 GGCCTACTCCCTCCGTCC 60.839 72.222 0.00 0.00 0.00 4.79
1728 2853 2.128507 CAGGCCTACTCCCTCCGTC 61.129 68.421 3.98 0.00 0.00 4.79
1729 2854 1.578215 TACAGGCCTACTCCCTCCGT 61.578 60.000 3.98 0.00 0.00 4.69
1730 2855 0.396695 TTACAGGCCTACTCCCTCCG 60.397 60.000 3.98 0.00 0.00 4.63
1754 2883 3.122850 CCGGCCAGCATGATTTCC 58.877 61.111 2.24 0.00 39.69 3.13
2008 3140 6.305638 GTGCATTTCTTTTTCGGAGTAACATC 59.694 38.462 0.00 0.00 0.00 3.06
2226 3359 4.344679 TCCAACCATTTGAATCTGCAGTTT 59.655 37.500 14.67 12.08 34.24 2.66
2292 3425 1.041437 GTTCTGGGAGGATACGGAGG 58.959 60.000 0.00 0.00 46.39 4.30
2296 3429 1.776662 TCTGGTTCTGGGAGGATACG 58.223 55.000 0.00 0.00 46.39 3.06
2509 3842 7.030768 TGAACACATAAAACATGCATGATGAG 58.969 34.615 32.75 23.10 35.80 2.90
2520 3853 5.268118 TGTTGCCATGAACACATAAAACA 57.732 34.783 0.00 0.00 30.75 2.83
2688 4021 5.240844 TGCAATGATCTTCCTGCATGATAAG 59.759 40.000 0.00 0.00 39.77 1.73
2868 4201 7.608376 TGTACATTAGGCATAAAAAGCACTACA 59.392 33.333 0.00 0.00 0.00 2.74
2961 4483 2.380084 TCACCAGGACTCAAATACGC 57.620 50.000 0.00 0.00 0.00 4.42
2962 4484 5.263968 ACTATCACCAGGACTCAAATACG 57.736 43.478 0.00 0.00 0.00 3.06
3030 4552 8.363390 CACCTATTCAGCATTCTAGAAGTATGA 58.637 37.037 11.53 10.97 0.00 2.15
3036 4558 6.798427 AGACACCTATTCAGCATTCTAGAA 57.202 37.500 7.82 7.82 0.00 2.10
3095 4617 7.823149 AGAAACTAATCTTTGCATGCAAATC 57.177 32.000 38.19 29.56 43.78 2.17
3241 4763 3.747099 CAGGATGCTGAAAAGGTTACG 57.253 47.619 8.85 0.00 0.00 3.18
3414 4936 9.410556 CCAACTAATTTTTCACCATAACTTCTG 57.589 33.333 0.00 0.00 0.00 3.02
3537 5060 5.408909 GGTAACTACAAAGCCAGAGAAGAAC 59.591 44.000 0.00 0.00 0.00 3.01
3594 5117 7.027161 GGTCCATACATGAATACAACAACAAC 58.973 38.462 0.00 0.00 0.00 3.32
3608 5131 3.826157 ACAAAACCACTGGTCCATACATG 59.174 43.478 0.00 0.00 33.12 3.21
4835 6362 1.550524 TGCTTAGCTGACCAGGTACAG 59.449 52.381 5.60 12.42 40.65 2.74
4836 6363 1.275291 GTGCTTAGCTGACCAGGTACA 59.725 52.381 5.60 2.70 40.65 2.90
4870 6398 1.355971 TAGAGCTACGCCGCAAAAAG 58.644 50.000 0.00 0.00 0.00 2.27
4929 6457 2.200373 AGTAGCCCATTGTTGGTCAC 57.800 50.000 0.00 0.00 41.91 3.67
4960 6488 5.573337 AGTAAGCAGCAAGAAATCCATTC 57.427 39.130 0.00 0.00 38.39 2.67
4961 6489 5.717119 CAAGTAAGCAGCAAGAAATCCATT 58.283 37.500 0.00 0.00 0.00 3.16
4978 6506 8.154856 AGAGAAGGTACAAACAATAGCAAGTAA 58.845 33.333 0.00 0.00 0.00 2.24
5006 6534 6.488769 AGGATAAATTGTCCACCATACGTA 57.511 37.500 11.34 0.00 38.25 3.57
5063 6591 2.294979 GGGACGCCTTATAAACAAGGG 58.705 52.381 4.18 0.00 44.56 3.95
5135 6663 0.034863 TTAAGCGCCTAAAGTGGGGG 60.035 55.000 2.29 0.00 40.00 5.40
5136 6664 1.379527 CTTAAGCGCCTAAAGTGGGG 58.620 55.000 2.29 0.00 42.18 4.96
5199 6727 8.128322 TGGCATTGTTTATAAGGTGTTAATGT 57.872 30.769 0.00 0.00 0.00 2.71
5201 6729 8.976353 TCATGGCATTGTTTATAAGGTGTTAAT 58.024 29.630 0.00 0.00 0.00 1.40
5270 6798 6.489700 TCAAGCAATCATGGAAACTAGAACAA 59.510 34.615 0.00 0.00 0.00 2.83
5297 6825 6.294342 CCAAGAACATGGGATGCTATATTGTG 60.294 42.308 0.00 0.00 36.79 3.33
5298 6826 5.771666 CCAAGAACATGGGATGCTATATTGT 59.228 40.000 0.00 0.00 36.79 2.71
5310 6838 6.407299 CCCTCATTTAATTCCAAGAACATGGG 60.407 42.308 0.00 0.00 41.05 4.00
5316 6844 5.083122 TGCACCCTCATTTAATTCCAAGAA 58.917 37.500 0.00 0.00 0.00 2.52
5428 6956 3.555956 GTGCATCTAGTTTCGTGGTATGG 59.444 47.826 0.00 0.00 0.00 2.74
5431 6959 4.219944 AGAAGTGCATCTAGTTTCGTGGTA 59.780 41.667 0.00 0.00 0.00 3.25
5432 6960 3.006967 AGAAGTGCATCTAGTTTCGTGGT 59.993 43.478 0.00 0.00 0.00 4.16
5433 6961 3.589988 AGAAGTGCATCTAGTTTCGTGG 58.410 45.455 0.00 0.00 0.00 4.94
5434 6962 4.237724 TGAGAAGTGCATCTAGTTTCGTG 58.762 43.478 0.00 0.00 0.00 4.35
5435 6963 4.521130 TGAGAAGTGCATCTAGTTTCGT 57.479 40.909 0.00 0.00 0.00 3.85
5436 6964 6.414408 AAATGAGAAGTGCATCTAGTTTCG 57.586 37.500 0.00 0.00 0.00 3.46
5438 6966 9.331282 GGTATAAATGAGAAGTGCATCTAGTTT 57.669 33.333 0.00 0.00 0.00 2.66
5439 6967 8.486210 TGGTATAAATGAGAAGTGCATCTAGTT 58.514 33.333 0.00 0.00 0.00 2.24
5440 6968 8.023021 TGGTATAAATGAGAAGTGCATCTAGT 57.977 34.615 0.00 0.00 0.00 2.57
5441 6969 9.149225 GATGGTATAAATGAGAAGTGCATCTAG 57.851 37.037 0.00 0.00 0.00 2.43
5442 6970 8.650490 TGATGGTATAAATGAGAAGTGCATCTA 58.350 33.333 0.00 0.00 0.00 1.98
5443 6971 7.512130 TGATGGTATAAATGAGAAGTGCATCT 58.488 34.615 0.00 0.00 0.00 2.90
5444 6972 7.734924 TGATGGTATAAATGAGAAGTGCATC 57.265 36.000 0.00 0.00 0.00 3.91
5445 6973 7.255381 GCTTGATGGTATAAATGAGAAGTGCAT 60.255 37.037 0.00 0.00 0.00 3.96
5446 6974 6.038603 GCTTGATGGTATAAATGAGAAGTGCA 59.961 38.462 0.00 0.00 0.00 4.57
5447 6975 6.261826 AGCTTGATGGTATAAATGAGAAGTGC 59.738 38.462 0.00 0.00 0.00 4.40
5448 6976 7.798596 AGCTTGATGGTATAAATGAGAAGTG 57.201 36.000 0.00 0.00 0.00 3.16
5449 6977 8.709308 ACTAGCTTGATGGTATAAATGAGAAGT 58.291 33.333 1.04 0.00 0.00 3.01
5450 6978 9.202273 GACTAGCTTGATGGTATAAATGAGAAG 57.798 37.037 1.04 0.00 0.00 2.85
5451 6979 8.704668 TGACTAGCTTGATGGTATAAATGAGAA 58.295 33.333 1.04 0.00 0.00 2.87
5452 6980 8.250143 TGACTAGCTTGATGGTATAAATGAGA 57.750 34.615 1.04 0.00 0.00 3.27
5453 6981 8.893219 TTGACTAGCTTGATGGTATAAATGAG 57.107 34.615 1.04 0.00 0.00 2.90
5454 6982 9.276590 CATTGACTAGCTTGATGGTATAAATGA 57.723 33.333 1.04 0.00 31.54 2.57
5455 6983 9.276590 TCATTGACTAGCTTGATGGTATAAATG 57.723 33.333 1.04 0.00 31.37 2.32
5456 6984 9.277783 GTCATTGACTAGCTTGATGGTATAAAT 57.722 33.333 9.59 0.00 0.00 1.40
5457 6985 8.264347 TGTCATTGACTAGCTTGATGGTATAAA 58.736 33.333 17.26 0.00 33.15 1.40
5458 6986 7.791029 TGTCATTGACTAGCTTGATGGTATAA 58.209 34.615 17.26 0.00 33.15 0.98
5459 6987 7.360113 TGTCATTGACTAGCTTGATGGTATA 57.640 36.000 17.26 0.00 33.15 1.47
5460 6988 6.239217 TGTCATTGACTAGCTTGATGGTAT 57.761 37.500 17.26 0.00 33.15 2.73
5461 6989 5.675684 TGTCATTGACTAGCTTGATGGTA 57.324 39.130 17.26 0.00 33.15 3.25
5462 6990 4.558226 TGTCATTGACTAGCTTGATGGT 57.442 40.909 17.26 0.00 33.15 3.55
5463 6991 4.880120 ACATGTCATTGACTAGCTTGATGG 59.120 41.667 17.26 0.57 33.15 3.51
5464 6992 5.220796 CCACATGTCATTGACTAGCTTGATG 60.221 44.000 17.26 12.38 33.15 3.07
5465 6993 4.880120 CCACATGTCATTGACTAGCTTGAT 59.120 41.667 17.26 0.00 33.15 2.57
5466 6994 4.256110 CCACATGTCATTGACTAGCTTGA 58.744 43.478 17.26 0.00 33.15 3.02
5467 6995 3.376234 CCCACATGTCATTGACTAGCTTG 59.624 47.826 17.26 9.56 33.15 4.01
5468 6996 3.614092 CCCACATGTCATTGACTAGCTT 58.386 45.455 17.26 0.00 33.15 3.74
5469 6997 2.092753 CCCCACATGTCATTGACTAGCT 60.093 50.000 17.26 0.00 33.15 3.32
5470 6998 2.292267 CCCCACATGTCATTGACTAGC 58.708 52.381 17.26 0.00 33.15 3.42
5471 6999 3.198635 AGACCCCACATGTCATTGACTAG 59.801 47.826 17.26 11.78 35.15 2.57
5472 7000 3.055167 CAGACCCCACATGTCATTGACTA 60.055 47.826 17.26 5.09 35.15 2.59
5473 7001 1.988107 AGACCCCACATGTCATTGACT 59.012 47.619 17.26 1.18 35.15 3.41
5474 7002 2.086869 CAGACCCCACATGTCATTGAC 58.913 52.381 9.93 9.93 35.15 3.18
5475 7003 1.004628 CCAGACCCCACATGTCATTGA 59.995 52.381 0.00 0.00 35.15 2.57
5476 7004 1.466856 CCAGACCCCACATGTCATTG 58.533 55.000 0.00 0.00 35.15 2.82
5477 7005 0.332632 CCCAGACCCCACATGTCATT 59.667 55.000 0.00 0.00 35.15 2.57
5478 7006 1.574526 CCCCAGACCCCACATGTCAT 61.575 60.000 0.00 0.00 35.15 3.06
5479 7007 2.230653 CCCCAGACCCCACATGTCA 61.231 63.158 0.00 0.00 35.15 3.58
5480 7008 2.198304 GACCCCAGACCCCACATGTC 62.198 65.000 0.00 0.00 0.00 3.06
5481 7009 2.121506 ACCCCAGACCCCACATGT 60.122 61.111 0.00 0.00 0.00 3.21
5482 7010 1.925455 AGACCCCAGACCCCACATG 60.925 63.158 0.00 0.00 0.00 3.21
5483 7011 1.925455 CAGACCCCAGACCCCACAT 60.925 63.158 0.00 0.00 0.00 3.21
5484 7012 2.529136 CAGACCCCAGACCCCACA 60.529 66.667 0.00 0.00 0.00 4.17
5485 7013 3.330720 CCAGACCCCAGACCCCAC 61.331 72.222 0.00 0.00 0.00 4.61
5486 7014 3.864983 GACCAGACCCCAGACCCCA 62.865 68.421 0.00 0.00 0.00 4.96
5487 7015 3.009714 GACCAGACCCCAGACCCC 61.010 72.222 0.00 0.00 0.00 4.95
5488 7016 3.009714 GGACCAGACCCCAGACCC 61.010 72.222 0.00 0.00 0.00 4.46
5489 7017 2.122954 AGGACCAGACCCCAGACC 59.877 66.667 0.00 0.00 0.00 3.85
5490 7018 0.252103 TACAGGACCAGACCCCAGAC 60.252 60.000 0.00 0.00 0.00 3.51
5491 7019 0.716591 ATACAGGACCAGACCCCAGA 59.283 55.000 0.00 0.00 0.00 3.86
5492 7020 0.833287 CATACAGGACCAGACCCCAG 59.167 60.000 0.00 0.00 0.00 4.45
5493 7021 0.118346 ACATACAGGACCAGACCCCA 59.882 55.000 0.00 0.00 0.00 4.96
5494 7022 0.831307 GACATACAGGACCAGACCCC 59.169 60.000 0.00 0.00 0.00 4.95
5495 7023 1.568504 TGACATACAGGACCAGACCC 58.431 55.000 0.00 0.00 0.00 4.46
5496 7024 3.197766 TCAATGACATACAGGACCAGACC 59.802 47.826 0.00 0.00 0.00 3.85
5497 7025 4.471904 TCAATGACATACAGGACCAGAC 57.528 45.455 0.00 0.00 0.00 3.51
5498 7026 4.471025 ACATCAATGACATACAGGACCAGA 59.529 41.667 0.00 0.00 0.00 3.86
5499 7027 4.774124 ACATCAATGACATACAGGACCAG 58.226 43.478 0.00 0.00 0.00 4.00
5500 7028 4.842531 ACATCAATGACATACAGGACCA 57.157 40.909 0.00 0.00 0.00 4.02
5501 7029 6.291377 ACATACATCAATGACATACAGGACC 58.709 40.000 0.00 0.00 0.00 4.46
5502 7030 7.495606 TCAACATACATCAATGACATACAGGAC 59.504 37.037 0.00 0.00 0.00 3.85
5503 7031 7.563906 TCAACATACATCAATGACATACAGGA 58.436 34.615 0.00 0.00 0.00 3.86
5504 7032 7.790823 TCAACATACATCAATGACATACAGG 57.209 36.000 0.00 0.00 0.00 4.00
5505 7033 8.287503 CCATCAACATACATCAATGACATACAG 58.712 37.037 0.00 0.00 0.00 2.74
5506 7034 7.774625 ACCATCAACATACATCAATGACATACA 59.225 33.333 0.00 0.00 0.00 2.29
5507 7035 8.158169 ACCATCAACATACATCAATGACATAC 57.842 34.615 0.00 0.00 0.00 2.39
5509 7037 8.929260 ATACCATCAACATACATCAATGACAT 57.071 30.769 0.00 0.00 0.00 3.06
5510 7038 9.844257 TTATACCATCAACATACATCAATGACA 57.156 29.630 0.00 0.00 0.00 3.58
5521 7049 9.056005 GCACTTCTCATTTATACCATCAACATA 57.944 33.333 0.00 0.00 0.00 2.29
5522 7050 7.557358 TGCACTTCTCATTTATACCATCAACAT 59.443 33.333 0.00 0.00 0.00 2.71
5523 7051 6.883756 TGCACTTCTCATTTATACCATCAACA 59.116 34.615 0.00 0.00 0.00 3.33
5524 7052 7.189512 GTGCACTTCTCATTTATACCATCAAC 58.810 38.462 10.32 0.00 0.00 3.18
5525 7053 6.318648 GGTGCACTTCTCATTTATACCATCAA 59.681 38.462 17.98 0.00 0.00 2.57
5526 7054 5.822519 GGTGCACTTCTCATTTATACCATCA 59.177 40.000 17.98 0.00 0.00 3.07
5527 7055 5.239525 GGGTGCACTTCTCATTTATACCATC 59.760 44.000 17.98 0.00 0.00 3.51
5528 7056 5.133221 GGGTGCACTTCTCATTTATACCAT 58.867 41.667 17.98 0.00 0.00 3.55
5529 7057 4.523083 GGGTGCACTTCTCATTTATACCA 58.477 43.478 17.98 0.00 0.00 3.25
5530 7058 3.560068 CGGGTGCACTTCTCATTTATACC 59.440 47.826 17.98 3.29 0.00 2.73
5531 7059 4.270325 GTCGGGTGCACTTCTCATTTATAC 59.730 45.833 17.98 0.00 0.00 1.47
5532 7060 4.439057 GTCGGGTGCACTTCTCATTTATA 58.561 43.478 17.98 0.00 0.00 0.98
5533 7061 3.270877 GTCGGGTGCACTTCTCATTTAT 58.729 45.455 17.98 0.00 0.00 1.40
5534 7062 2.695359 GTCGGGTGCACTTCTCATTTA 58.305 47.619 17.98 0.00 0.00 1.40
5535 7063 1.523758 GTCGGGTGCACTTCTCATTT 58.476 50.000 17.98 0.00 0.00 2.32
5536 7064 0.670546 CGTCGGGTGCACTTCTCATT 60.671 55.000 17.98 0.00 0.00 2.57
5537 7065 1.079819 CGTCGGGTGCACTTCTCAT 60.080 57.895 17.98 0.00 0.00 2.90
5538 7066 2.338620 CGTCGGGTGCACTTCTCA 59.661 61.111 17.98 0.00 0.00 3.27
5539 7067 2.022129 CACGTCGGGTGCACTTCTC 61.022 63.158 17.98 0.00 40.33 2.87
5540 7068 2.029073 CACGTCGGGTGCACTTCT 59.971 61.111 17.98 0.00 40.33 2.85
5541 7069 3.041940 CCACGTCGGGTGCACTTC 61.042 66.667 17.98 8.66 45.62 3.01
5542 7070 3.857038 ACCACGTCGGGTGCACTT 61.857 61.111 17.98 0.00 45.62 3.16
5548 7076 2.652095 CCATACCACCACGTCGGGT 61.652 63.158 7.40 7.40 43.56 5.28
5549 7077 2.175035 AACCATACCACCACGTCGGG 62.175 60.000 8.57 0.00 40.22 5.14
5550 7078 1.017177 CAACCATACCACCACGTCGG 61.017 60.000 0.00 2.92 42.50 4.79
5551 7079 1.017177 CCAACCATACCACCACGTCG 61.017 60.000 0.00 0.00 0.00 5.12
5552 7080 0.322322 TCCAACCATACCACCACGTC 59.678 55.000 0.00 0.00 0.00 4.34
5553 7081 0.766131 TTCCAACCATACCACCACGT 59.234 50.000 0.00 0.00 0.00 4.49
5554 7082 2.122783 ATTCCAACCATACCACCACG 57.877 50.000 0.00 0.00 0.00 4.94
5555 7083 6.538945 AAAATATTCCAACCATACCACCAC 57.461 37.500 0.00 0.00 0.00 4.16
5556 7084 8.666129 TTTAAAATATTCCAACCATACCACCA 57.334 30.769 0.00 0.00 0.00 4.17
5557 7085 9.945904 TTTTTAAAATATTCCAACCATACCACC 57.054 29.630 0.55 0.00 0.00 4.61
5584 7112 6.380095 TGAAGCACGGTTGTACTAATTTTT 57.620 33.333 0.00 0.00 0.00 1.94
5585 7113 6.016610 ACATGAAGCACGGTTGTACTAATTTT 60.017 34.615 0.00 0.00 0.00 1.82
5586 7114 5.472137 ACATGAAGCACGGTTGTACTAATTT 59.528 36.000 0.00 0.00 0.00 1.82
5587 7115 5.001232 ACATGAAGCACGGTTGTACTAATT 58.999 37.500 0.00 0.00 0.00 1.40
5588 7116 4.575885 ACATGAAGCACGGTTGTACTAAT 58.424 39.130 0.00 0.00 0.00 1.73
5589 7117 3.997762 ACATGAAGCACGGTTGTACTAA 58.002 40.909 0.00 0.00 0.00 2.24
5590 7118 3.671008 ACATGAAGCACGGTTGTACTA 57.329 42.857 0.00 0.00 0.00 1.82
5591 7119 2.543777 ACATGAAGCACGGTTGTACT 57.456 45.000 0.00 0.00 0.00 2.73
5592 7120 4.390603 TCATAACATGAAGCACGGTTGTAC 59.609 41.667 0.00 0.00 36.11 2.90
5593 7121 4.390603 GTCATAACATGAAGCACGGTTGTA 59.609 41.667 0.00 0.00 41.69 2.41
5594 7122 3.188460 GTCATAACATGAAGCACGGTTGT 59.812 43.478 0.00 0.00 41.69 3.32
5595 7123 3.188254 TGTCATAACATGAAGCACGGTTG 59.812 43.478 0.00 0.00 41.69 3.77
5596 7124 3.407698 TGTCATAACATGAAGCACGGTT 58.592 40.909 0.00 0.00 41.69 4.44
5597 7125 3.052455 TGTCATAACATGAAGCACGGT 57.948 42.857 0.00 0.00 41.69 4.83
5598 7126 5.929697 ATATGTCATAACATGAAGCACGG 57.070 39.130 0.00 0.00 45.72 4.94
5599 7127 8.021955 ACATATATGTCATAACATGAAGCACG 57.978 34.615 12.75 0.00 45.72 5.34
5602 7130 9.926751 GCATACATATATGTCATAACATGAAGC 57.073 33.333 21.49 6.33 45.72 3.86
5604 7132 9.956640 TGGCATACATATATGTCATAACATGAA 57.043 29.630 21.49 8.23 46.23 2.57
5614 7142 7.442364 ACTTGACACTTGGCATACATATATGTC 59.558 37.037 21.49 8.32 42.77 3.06
5615 7143 7.282585 ACTTGACACTTGGCATACATATATGT 58.717 34.615 21.57 21.57 44.48 2.29
5616 7144 7.734924 ACTTGACACTTGGCATACATATATG 57.265 36.000 11.29 11.29 41.16 1.78
5617 7145 7.992608 TGAACTTGACACTTGGCATACATATAT 59.007 33.333 0.00 0.00 30.06 0.86
5618 7146 7.334858 TGAACTTGACACTTGGCATACATATA 58.665 34.615 0.00 0.00 30.06 0.86
5619 7147 6.179756 TGAACTTGACACTTGGCATACATAT 58.820 36.000 0.00 0.00 30.06 1.78
5620 7148 5.555966 TGAACTTGACACTTGGCATACATA 58.444 37.500 0.00 0.00 30.06 2.29
5621 7149 4.397420 TGAACTTGACACTTGGCATACAT 58.603 39.130 0.00 0.00 30.06 2.29
5622 7150 3.814625 TGAACTTGACACTTGGCATACA 58.185 40.909 0.00 0.00 30.06 2.29
5623 7151 4.829064 TTGAACTTGACACTTGGCATAC 57.171 40.909 0.00 0.00 30.06 2.39
5624 7152 4.887071 AGTTTGAACTTGACACTTGGCATA 59.113 37.500 0.00 0.00 35.21 3.14
5625 7153 3.701040 AGTTTGAACTTGACACTTGGCAT 59.299 39.130 0.00 0.00 35.21 4.40
5626 7154 3.088532 AGTTTGAACTTGACACTTGGCA 58.911 40.909 0.00 0.00 35.21 4.92
5627 7155 3.128589 TGAGTTTGAACTTGACACTTGGC 59.871 43.478 0.00 0.00 39.88 4.52
5628 7156 4.963276 TGAGTTTGAACTTGACACTTGG 57.037 40.909 0.00 0.00 39.88 3.61
5629 7157 6.690098 CAGATTGAGTTTGAACTTGACACTTG 59.310 38.462 0.00 0.00 39.88 3.16
5630 7158 6.183360 CCAGATTGAGTTTGAACTTGACACTT 60.183 38.462 0.00 0.00 39.88 3.16
5631 7159 5.297776 CCAGATTGAGTTTGAACTTGACACT 59.702 40.000 0.00 0.00 39.88 3.55
5632 7160 5.296780 TCCAGATTGAGTTTGAACTTGACAC 59.703 40.000 0.00 0.00 39.88 3.67
5633 7161 5.436175 TCCAGATTGAGTTTGAACTTGACA 58.564 37.500 0.00 0.00 39.88 3.58
5634 7162 6.566197 ATCCAGATTGAGTTTGAACTTGAC 57.434 37.500 0.00 0.00 39.88 3.18
5635 7163 7.587037 AAATCCAGATTGAGTTTGAACTTGA 57.413 32.000 0.00 0.00 39.88 3.02
5674 7202 5.957842 AGTTCAAACGCAATCTGGATTTA 57.042 34.783 0.00 0.00 0.00 1.40
5729 7259 6.767423 AGCTTACAAAATTTGAACTTTGGCAT 59.233 30.769 13.19 0.00 36.94 4.40
5906 7436 4.311816 CCAAAAAGGTAGGCATGCATAG 57.688 45.455 21.36 2.73 0.00 2.23
6873 8410 2.107204 ACTCCAGTTTCCATTGAGCTGT 59.893 45.455 0.00 0.00 0.00 4.40
6879 8416 3.826157 TGGCTAAACTCCAGTTTCCATTG 59.174 43.478 7.98 0.00 44.15 2.82
6986 8523 3.930336 TCTTGAGTTGAACATGATCGCT 58.070 40.909 0.00 0.00 0.00 4.93
7225 8768 8.821147 AACTAAAACGTGTCTACATACATTCA 57.179 30.769 0.00 0.00 0.00 2.57
7234 8777 7.046060 CGAACAAACAAACTAAAACGTGTCTAC 60.046 37.037 0.00 0.00 0.00 2.59
7250 8793 4.335315 AGAGTGAAATGAGCGAACAAACAA 59.665 37.500 0.00 0.00 0.00 2.83
7350 8895 0.601558 GAGGCGGAGACACAACACTA 59.398 55.000 0.00 0.00 39.87 2.74
7363 8908 0.249489 CAATAGAACCGGAGAGGCGG 60.249 60.000 9.46 0.00 46.52 6.13
7364 8909 0.249489 CCAATAGAACCGGAGAGGCG 60.249 60.000 9.46 0.00 46.52 5.52
7365 8910 0.533085 GCCAATAGAACCGGAGAGGC 60.533 60.000 9.46 7.78 46.52 4.70
7367 8912 2.990066 AAGCCAATAGAACCGGAGAG 57.010 50.000 9.46 0.00 0.00 3.20
7412 8957 1.472480 GAACACATGAATCCAACCGGG 59.528 52.381 6.32 0.00 38.37 5.73
7524 9081 5.123227 GGAACAAATCGATTGACCCAGATA 58.877 41.667 12.25 0.00 41.85 1.98
7535 9092 0.035439 ACGGCTGGGAACAAATCGAT 60.035 50.000 0.00 0.00 42.06 3.59
7537 9094 0.109781 CAACGGCTGGGAACAAATCG 60.110 55.000 0.00 0.00 42.06 3.34
7538 9095 1.243902 TCAACGGCTGGGAACAAATC 58.756 50.000 0.00 0.00 42.06 2.17
7540 9097 1.339610 CATTCAACGGCTGGGAACAAA 59.660 47.619 0.00 0.00 42.06 2.83
7573 9130 6.005823 TGAACAATGTTCCATGAAGATCTGT 58.994 36.000 21.75 0.00 0.00 3.41
7583 9141 4.396166 GGAAGACGATGAACAATGTTCCAT 59.604 41.667 21.75 15.04 33.75 3.41
7584 9142 3.751175 GGAAGACGATGAACAATGTTCCA 59.249 43.478 21.75 11.29 33.75 3.53
7585 9143 4.003648 AGGAAGACGATGAACAATGTTCC 58.996 43.478 21.75 7.83 33.74 3.62
7586 9144 5.409826 AGAAGGAAGACGATGAACAATGTTC 59.590 40.000 18.42 18.42 0.00 3.18
7587 9145 5.308825 AGAAGGAAGACGATGAACAATGTT 58.691 37.500 0.00 0.00 0.00 2.71
7588 9146 4.899502 AGAAGGAAGACGATGAACAATGT 58.100 39.130 0.00 0.00 0.00 2.71
7608 9173 2.519541 CAGATCGAGGCCGGGAGA 60.520 66.667 2.18 0.00 36.24 3.71
7615 9180 1.590259 GAGCGGTTCAGATCGAGGC 60.590 63.158 0.00 0.00 0.00 4.70
7619 9184 0.716108 GTTGTGAGCGGTTCAGATCG 59.284 55.000 0.00 0.00 36.21 3.69
7632 9197 4.243008 TTCAGCCGGCGGTTGTGA 62.243 61.111 35.97 27.36 35.40 3.58
7672 9237 5.942826 AGGAGAAGGAAGACAATGAACAATC 59.057 40.000 0.00 0.00 0.00 2.67
7673 9238 5.709164 CAGGAGAAGGAAGACAATGAACAAT 59.291 40.000 0.00 0.00 0.00 2.71
7674 9239 5.065914 CAGGAGAAGGAAGACAATGAACAA 58.934 41.667 0.00 0.00 0.00 2.83
7675 9240 4.347876 TCAGGAGAAGGAAGACAATGAACA 59.652 41.667 0.00 0.00 0.00 3.18
7676 9241 4.693095 GTCAGGAGAAGGAAGACAATGAAC 59.307 45.833 0.00 0.00 0.00 3.18
7677 9242 4.263068 GGTCAGGAGAAGGAAGACAATGAA 60.263 45.833 0.00 0.00 0.00 2.57
7678 9243 3.261897 GGTCAGGAGAAGGAAGACAATGA 59.738 47.826 0.00 0.00 0.00 2.57
7679 9244 3.262915 AGGTCAGGAGAAGGAAGACAATG 59.737 47.826 0.00 0.00 0.00 2.82
7680 9245 3.517500 GAGGTCAGGAGAAGGAAGACAAT 59.482 47.826 0.00 0.00 0.00 2.71
7681 9246 2.900546 GAGGTCAGGAGAAGGAAGACAA 59.099 50.000 0.00 0.00 0.00 3.18
7682 9247 2.530701 GAGGTCAGGAGAAGGAAGACA 58.469 52.381 0.00 0.00 0.00 3.41
7683 9248 1.474879 CGAGGTCAGGAGAAGGAAGAC 59.525 57.143 0.00 0.00 0.00 3.01
7684 9249 1.354705 TCGAGGTCAGGAGAAGGAAGA 59.645 52.381 0.00 0.00 0.00 2.87
7685 9250 1.840737 TCGAGGTCAGGAGAAGGAAG 58.159 55.000 0.00 0.00 0.00 3.46
7686 9251 2.024846 AGATCGAGGTCAGGAGAAGGAA 60.025 50.000 0.00 0.00 0.00 3.36
7687 9252 1.566703 AGATCGAGGTCAGGAGAAGGA 59.433 52.381 0.00 0.00 0.00 3.36
7688 9253 1.680735 CAGATCGAGGTCAGGAGAAGG 59.319 57.143 0.00 0.00 0.00 3.46
7689 9254 2.649190 TCAGATCGAGGTCAGGAGAAG 58.351 52.381 0.00 0.00 0.00 2.85
7690 9255 2.755655 GTTCAGATCGAGGTCAGGAGAA 59.244 50.000 0.00 0.00 0.00 2.87
7691 9256 2.370349 GTTCAGATCGAGGTCAGGAGA 58.630 52.381 0.00 0.00 0.00 3.71
7692 9257 1.407258 GGTTCAGATCGAGGTCAGGAG 59.593 57.143 0.00 0.00 0.00 3.69
7693 9258 1.475403 GGTTCAGATCGAGGTCAGGA 58.525 55.000 0.00 0.00 0.00 3.86
7694 9259 0.101399 CGGTTCAGATCGAGGTCAGG 59.899 60.000 0.00 0.00 0.00 3.86
7695 9260 0.526524 GCGGTTCAGATCGAGGTCAG 60.527 60.000 0.00 0.00 0.00 3.51
7696 9261 0.965866 AGCGGTTCAGATCGAGGTCA 60.966 55.000 0.00 0.00 0.00 4.02
7697 9262 0.248702 GAGCGGTTCAGATCGAGGTC 60.249 60.000 0.00 0.00 0.00 3.85
7698 9263 0.965866 TGAGCGGTTCAGATCGAGGT 60.966 55.000 0.00 0.00 0.00 3.85
7699 9264 0.526524 GTGAGCGGTTCAGATCGAGG 60.527 60.000 0.00 0.00 36.21 4.63
7700 9265 0.171231 TGTGAGCGGTTCAGATCGAG 59.829 55.000 0.00 0.00 36.21 4.04
7701 9266 0.601057 TTGTGAGCGGTTCAGATCGA 59.399 50.000 0.00 0.00 36.21 3.59
7702 9267 0.716108 GTTGTGAGCGGTTCAGATCG 59.284 55.000 0.00 0.00 36.21 3.69
7703 9268 1.079503 GGTTGTGAGCGGTTCAGATC 58.920 55.000 0.00 0.00 36.21 2.75
7704 9269 0.670546 CGGTTGTGAGCGGTTCAGAT 60.671 55.000 0.00 0.00 42.72 2.90
7705 9270 1.300620 CGGTTGTGAGCGGTTCAGA 60.301 57.895 0.00 0.00 42.72 3.27
7706 9271 3.244105 CGGTTGTGAGCGGTTCAG 58.756 61.111 0.00 0.00 42.72 3.02
7712 9277 2.660552 AACCGACGGTTGTGAGCG 60.661 61.111 30.63 0.00 45.07 5.03
7720 9285 2.109593 GGTGGTTCAACCGACGGT 59.890 61.111 15.37 15.37 42.58 4.83
7721 9286 1.959226 CAGGTGGTTCAACCGACGG 60.959 63.158 13.61 13.61 45.53 4.79
7722 9287 2.604174 GCAGGTGGTTCAACCGACG 61.604 63.158 1.02 0.00 45.53 5.12
7723 9288 2.258726 GGCAGGTGGTTCAACCGAC 61.259 63.158 1.02 1.37 45.53 4.79
7724 9289 1.122632 TAGGCAGGTGGTTCAACCGA 61.123 55.000 1.02 0.00 45.53 4.69
7725 9290 0.953960 GTAGGCAGGTGGTTCAACCG 60.954 60.000 1.02 0.00 45.53 4.44
7726 9291 0.953960 CGTAGGCAGGTGGTTCAACC 60.954 60.000 0.00 0.00 40.85 3.77
7727 9292 1.574702 GCGTAGGCAGGTGGTTCAAC 61.575 60.000 1.75 0.00 39.62 3.18
7728 9293 1.302192 GCGTAGGCAGGTGGTTCAA 60.302 57.895 1.75 0.00 39.62 2.69
7729 9294 2.345991 GCGTAGGCAGGTGGTTCA 59.654 61.111 1.75 0.00 39.62 3.18
7756 9321 4.007644 TCACAGGAGCGCCACCAG 62.008 66.667 20.53 15.77 36.29 4.00
7757 9322 4.314440 GTCACAGGAGCGCCACCA 62.314 66.667 20.53 0.24 36.29 4.17
7759 9324 4.314440 TGGTCACAGGAGCGCCAC 62.314 66.667 9.88 0.00 44.47 5.01
7760 9325 4.314440 GTGGTCACAGGAGCGCCA 62.314 66.667 9.88 0.00 44.21 5.69
7763 9328 2.262915 GAGGTGGTCACAGGAGCG 59.737 66.667 3.40 0.00 44.47 5.03
7764 9329 2.262915 CGAGGTGGTCACAGGAGC 59.737 66.667 3.40 0.00 41.89 4.70
7765 9330 1.587054 GACGAGGTGGTCACAGGAG 59.413 63.158 3.40 0.00 36.91 3.69
7766 9331 1.906824 GGACGAGGTGGTCACAGGA 60.907 63.158 3.40 0.00 38.70 3.86
7767 9332 1.878656 GAGGACGAGGTGGTCACAGG 61.879 65.000 3.40 0.00 38.70 4.00
7768 9333 1.587054 GAGGACGAGGTGGTCACAG 59.413 63.158 3.40 0.00 38.70 3.66
7769 9334 1.906824 GGAGGACGAGGTGGTCACA 60.907 63.158 3.40 0.00 38.70 3.58
7770 9335 1.596895 GAGGAGGACGAGGTGGTCAC 61.597 65.000 0.00 0.00 38.70 3.67
7771 9336 1.304217 GAGGAGGACGAGGTGGTCA 60.304 63.158 0.00 0.00 38.70 4.02
7772 9337 1.000646 AGAGGAGGACGAGGTGGTC 60.001 63.158 0.00 0.00 36.18 4.02
7773 9338 1.000646 GAGAGGAGGACGAGGTGGT 60.001 63.158 0.00 0.00 0.00 4.16
7774 9339 0.612174 TTGAGAGGAGGACGAGGTGG 60.612 60.000 0.00 0.00 0.00 4.61
7775 9340 0.528470 GTTGAGAGGAGGACGAGGTG 59.472 60.000 0.00 0.00 0.00 4.00
7776 9341 0.612453 GGTTGAGAGGAGGACGAGGT 60.612 60.000 0.00 0.00 0.00 3.85
7777 9342 1.658686 CGGTTGAGAGGAGGACGAGG 61.659 65.000 0.00 0.00 0.00 4.63
7778 9343 0.961358 ACGGTTGAGAGGAGGACGAG 60.961 60.000 0.00 0.00 0.00 4.18
7779 9344 0.538977 AACGGTTGAGAGGAGGACGA 60.539 55.000 0.00 0.00 0.00 4.20
7780 9345 0.388649 CAACGGTTGAGAGGAGGACG 60.389 60.000 15.66 0.00 0.00 4.79
7781 9346 0.680061 ACAACGGTTGAGAGGAGGAC 59.320 55.000 26.39 0.00 0.00 3.85
7782 9347 0.679505 CACAACGGTTGAGAGGAGGA 59.320 55.000 26.39 0.00 0.00 3.71
7783 9348 0.393077 ACACAACGGTTGAGAGGAGG 59.607 55.000 26.39 9.22 0.00 4.30
7784 9349 2.240493 AACACAACGGTTGAGAGGAG 57.760 50.000 26.39 11.01 0.00 3.69
7805 9370 4.530857 GATGGTCGAGGGCGGTGG 62.531 72.222 0.00 0.00 38.28 4.61
7806 9371 4.530857 GGATGGTCGAGGGCGGTG 62.531 72.222 0.00 0.00 38.28 4.94
7809 9374 2.978298 TAGAGGGATGGTCGAGGGCG 62.978 65.000 0.00 0.00 39.35 6.13
7810 9375 0.759436 TTAGAGGGATGGTCGAGGGC 60.759 60.000 0.00 0.00 0.00 5.19
7811 9376 1.041437 GTTAGAGGGATGGTCGAGGG 58.959 60.000 0.00 0.00 0.00 4.30
7812 9377 1.041437 GGTTAGAGGGATGGTCGAGG 58.959 60.000 0.00 0.00 0.00 4.63
7813 9378 1.041437 GGGTTAGAGGGATGGTCGAG 58.959 60.000 0.00 0.00 0.00 4.04
7814 9379 0.398098 GGGGTTAGAGGGATGGTCGA 60.398 60.000 0.00 0.00 0.00 4.20
7815 9380 1.745320 CGGGGTTAGAGGGATGGTCG 61.745 65.000 0.00 0.00 0.00 4.79
7816 9381 1.408453 CCGGGGTTAGAGGGATGGTC 61.408 65.000 0.00 0.00 0.00 4.02
7817 9382 1.384082 CCGGGGTTAGAGGGATGGT 60.384 63.158 0.00 0.00 0.00 3.55
7818 9383 1.384082 ACCGGGGTTAGAGGGATGG 60.384 63.158 6.32 0.00 0.00 3.51
7819 9384 0.689745 TCACCGGGGTTAGAGGGATG 60.690 60.000 2.12 0.00 0.00 3.51
7820 9385 0.267960 ATCACCGGGGTTAGAGGGAT 59.732 55.000 2.12 0.00 0.00 3.85
7821 9386 0.689745 CATCACCGGGGTTAGAGGGA 60.690 60.000 2.12 0.00 0.00 4.20
7822 9387 0.689745 TCATCACCGGGGTTAGAGGG 60.690 60.000 2.12 0.00 0.00 4.30
7823 9388 0.464452 GTCATCACCGGGGTTAGAGG 59.536 60.000 2.12 0.00 0.00 3.69
7824 9389 0.464452 GGTCATCACCGGGGTTAGAG 59.536 60.000 2.12 0.00 31.06 2.43
7825 9390 2.599216 GGTCATCACCGGGGTTAGA 58.401 57.895 2.12 0.00 31.06 2.10
7834 9399 2.470821 CGATAAGAACCGGTCATCACC 58.529 52.381 8.04 0.00 39.69 4.02
7835 9400 2.470821 CCGATAAGAACCGGTCATCAC 58.529 52.381 8.04 0.00 40.78 3.06
7836 9401 1.411246 CCCGATAAGAACCGGTCATCA 59.589 52.381 8.04 0.00 43.93 3.07
7837 9402 1.872653 GCCCGATAAGAACCGGTCATC 60.873 57.143 8.04 1.86 43.93 2.92
7838 9403 0.106149 GCCCGATAAGAACCGGTCAT 59.894 55.000 8.04 0.00 43.93 3.06
7839 9404 1.518774 GCCCGATAAGAACCGGTCA 59.481 57.895 8.04 0.00 43.93 4.02
7840 9405 1.590792 CGCCCGATAAGAACCGGTC 60.591 63.158 8.04 0.95 43.93 4.79
7841 9406 1.606885 TTCGCCCGATAAGAACCGGT 61.607 55.000 0.00 0.00 43.93 5.28
7842 9407 1.142314 TTCGCCCGATAAGAACCGG 59.858 57.895 0.00 0.00 44.94 5.28
7843 9408 0.458889 TGTTCGCCCGATAAGAACCG 60.459 55.000 5.30 0.00 42.40 4.44
7844 9409 1.597663 CATGTTCGCCCGATAAGAACC 59.402 52.381 5.30 0.00 42.40 3.62
7845 9410 1.003866 GCATGTTCGCCCGATAAGAAC 60.004 52.381 0.00 1.11 43.12 3.01
7846 9411 1.295792 GCATGTTCGCCCGATAAGAA 58.704 50.000 0.00 0.00 0.00 2.52
7847 9412 0.176910 TGCATGTTCGCCCGATAAGA 59.823 50.000 0.00 0.00 0.00 2.10
7848 9413 1.195448 GATGCATGTTCGCCCGATAAG 59.805 52.381 2.46 0.00 0.00 1.73
7849 9414 1.202639 AGATGCATGTTCGCCCGATAA 60.203 47.619 2.46 0.00 0.00 1.75
7850 9415 0.392706 AGATGCATGTTCGCCCGATA 59.607 50.000 2.46 0.00 0.00 2.92
7851 9416 0.464373 AAGATGCATGTTCGCCCGAT 60.464 50.000 2.46 0.00 0.00 4.18
7852 9417 1.078497 AAGATGCATGTTCGCCCGA 60.078 52.632 2.46 0.00 0.00 5.14
7853 9418 1.353103 GAAGATGCATGTTCGCCCG 59.647 57.895 19.49 0.00 0.00 6.13
7854 9419 1.728490 GGGAAGATGCATGTTCGCCC 61.728 60.000 31.53 23.80 37.14 6.13
7855 9420 0.749454 AGGGAAGATGCATGTTCGCC 60.749 55.000 35.17 29.60 41.79 5.54
7856 9421 0.659957 GAGGGAAGATGCATGTTCGC 59.340 55.000 33.32 33.32 41.37 4.70
7857 9422 2.028420 TGAGGGAAGATGCATGTTCG 57.972 50.000 25.22 0.00 31.43 3.95
7858 9423 2.883386 GGATGAGGGAAGATGCATGTTC 59.117 50.000 24.53 24.53 0.00 3.18
7859 9424 2.423947 GGGATGAGGGAAGATGCATGTT 60.424 50.000 9.13 9.13 0.00 2.71
7860 9425 1.144503 GGGATGAGGGAAGATGCATGT 59.855 52.381 2.46 0.00 0.00 3.21
7861 9426 1.547223 GGGGATGAGGGAAGATGCATG 60.547 57.143 2.46 0.00 0.00 4.06
7862 9427 0.776176 GGGGATGAGGGAAGATGCAT 59.224 55.000 0.00 0.00 0.00 3.96
7863 9428 0.624206 TGGGGATGAGGGAAGATGCA 60.624 55.000 0.00 0.00 0.00 3.96
7864 9429 0.179006 GTGGGGATGAGGGAAGATGC 60.179 60.000 0.00 0.00 0.00 3.91
7865 9430 1.133976 GTGTGGGGATGAGGGAAGATG 60.134 57.143 0.00 0.00 0.00 2.90
7866 9431 1.216990 GTGTGGGGATGAGGGAAGAT 58.783 55.000 0.00 0.00 0.00 2.40
7867 9432 0.178876 TGTGTGGGGATGAGGGAAGA 60.179 55.000 0.00 0.00 0.00 2.87
7868 9433 0.035056 GTGTGTGGGGATGAGGGAAG 60.035 60.000 0.00 0.00 0.00 3.46
7869 9434 0.770166 TGTGTGTGGGGATGAGGGAA 60.770 55.000 0.00 0.00 0.00 3.97
7870 9435 1.151921 TGTGTGTGGGGATGAGGGA 60.152 57.895 0.00 0.00 0.00 4.20
7871 9436 1.002134 GTGTGTGTGGGGATGAGGG 60.002 63.158 0.00 0.00 0.00 4.30
7872 9437 1.275666 TAGTGTGTGTGGGGATGAGG 58.724 55.000 0.00 0.00 0.00 3.86
7873 9438 2.567169 TCTTAGTGTGTGTGGGGATGAG 59.433 50.000 0.00 0.00 0.00 2.90
7874 9439 2.615391 TCTTAGTGTGTGTGGGGATGA 58.385 47.619 0.00 0.00 0.00 2.92
7875 9440 3.634397 ATCTTAGTGTGTGTGGGGATG 57.366 47.619 0.00 0.00 0.00 3.51
7876 9441 4.620723 TCTATCTTAGTGTGTGTGGGGAT 58.379 43.478 0.00 0.00 0.00 3.85
7877 9442 4.055710 TCTATCTTAGTGTGTGTGGGGA 57.944 45.455 0.00 0.00 0.00 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.