Multiple sequence alignment - TraesCS3D01G122200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G122200 chr3D 100.000 3663 0 0 1 3663 79632825 79629163 0.000000e+00 6765.0
1 TraesCS3D01G122200 chr3D 81.967 183 27 4 3175 3351 21715113 21715295 2.280000e-32 150.0
2 TraesCS3D01G122200 chr3B 93.571 2753 123 28 4 2716 126003386 126000648 0.000000e+00 4054.0
3 TraesCS3D01G122200 chr3B 94.169 343 19 1 2765 3107 126000649 126000308 4.190000e-144 521.0
4 TraesCS3D01G122200 chr3B 80.000 175 31 3 3182 3352 415644975 415645149 3.840000e-25 126.0
5 TraesCS3D01G122200 chr3B 78.689 183 30 8 3175 3350 109965343 109965163 2.990000e-21 113.0
6 TraesCS3D01G122200 chr3A 96.216 1744 51 7 1 1730 93897127 93895385 0.000000e+00 2841.0
7 TraesCS3D01G122200 chr3A 93.319 1392 63 20 1731 3103 93895294 93893914 0.000000e+00 2028.0
8 TraesCS3D01G122200 chr3A 82.888 374 29 13 3175 3543 93893831 93893488 1.650000e-78 303.0
9 TraesCS3D01G122200 chr3A 79.459 185 28 10 3176 3352 490150632 490150814 4.970000e-24 122.0
10 TraesCS3D01G122200 chr1D 73.125 480 100 20 1864 2332 116548643 116549104 1.060000e-30 145.0
11 TraesCS3D01G122200 chr1A 73.069 479 102 21 1864 2332 127759795 127760256 1.060000e-30 145.0
12 TraesCS3D01G122200 chr4D 80.588 170 23 8 3175 3339 27151381 27151217 4.970000e-24 122.0
13 TraesCS3D01G122200 chr5D 80.892 157 25 4 3188 3339 115395144 115394988 6.430000e-23 119.0
14 TraesCS3D01G122200 chr1B 79.006 181 26 11 3172 3344 359490322 359490498 2.990000e-21 113.0
15 TraesCS3D01G122200 chr2D 78.571 154 27 6 3201 3350 524330510 524330359 3.010000e-16 97.1
16 TraesCS3D01G122200 chr4B 88.889 72 6 1 2909 2980 366471199 366471268 1.810000e-13 87.9
17 TraesCS3D01G122200 chrUn 94.340 53 2 1 2909 2960 408298328 408298276 3.030000e-11 80.5
18 TraesCS3D01G122200 chr7D 95.122 41 1 1 3020 3059 134847208 134847168 3.050000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G122200 chr3D 79629163 79632825 3662 True 6765.0 6765 100.000000 1 3663 1 chr3D.!!$R1 3662
1 TraesCS3D01G122200 chr3B 126000308 126003386 3078 True 2287.5 4054 93.870000 4 3107 2 chr3B.!!$R2 3103
2 TraesCS3D01G122200 chr3A 93893488 93897127 3639 True 1724.0 2841 90.807667 1 3543 3 chr3A.!!$R1 3542

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 61 0.112412 AGGGTTTGCTGGTCCGATTT 59.888 50.0 0.0 0.0 0.0 2.17 F
1645 1668 0.391597 TTCGACTGAACCACCTCCAC 59.608 55.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1983 2097 0.240945 GTGAAAGGAACGTGGCATGG 59.759 55.0 12.05 0.0 0.00 3.66 R
3551 3741 0.031721 GGAAGGCTATCCGTACGTGG 59.968 60.0 15.21 0.0 37.47 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 1.073284 TGGTTCTGTTTACCTCTGGGC 59.927 52.381 0.00 0.00 36.60 5.36
60 61 0.112412 AGGGTTTGCTGGTCCGATTT 59.888 50.000 0.00 0.00 0.00 2.17
236 244 2.445155 GGCCAGGTGATTTGGGGT 59.555 61.111 0.00 0.00 36.19 4.95
362 371 6.157211 CGTTTGAACTAGTATCTTGGTCTGT 58.843 40.000 0.00 0.00 0.00 3.41
384 393 8.559536 TCTGTCACAATTGATCTTTGTTTCTAC 58.440 33.333 13.59 8.30 35.18 2.59
412 421 5.063880 GGTAGATGTTACATTGGATCCACC 58.936 45.833 15.91 3.48 39.54 4.61
439 448 9.453830 AATCCTATCATTCCTAAGTTCCTACTT 57.546 33.333 0.00 0.00 46.18 2.24
556 565 3.055385 AGCTGTAGGATTGCGGAAAACTA 60.055 43.478 0.00 0.00 0.00 2.24
567 576 7.330700 GGATTGCGGAAAACTATTGATGAAAAA 59.669 33.333 0.00 0.00 0.00 1.94
932 950 0.895559 AAGCTAAGGTGCTGGGTTGC 60.896 55.000 0.00 0.00 43.24 4.17
1091 1109 1.447838 CAACATCCCGTCCGGACAG 60.448 63.158 32.80 22.76 46.09 3.51
1101 1119 2.543861 CCGTCCGGACAGTCATAATCAG 60.544 54.545 32.80 12.50 37.50 2.90
1190 1208 0.981183 ACCGGTATGCCTGACTTTCA 59.019 50.000 4.49 0.00 0.00 2.69
1314 1332 6.778069 AGATTATAGCAGCTGTTACTGTCCTA 59.222 38.462 16.64 5.76 39.96 2.94
1341 1359 1.019673 CAAGGAATGAGCATCCACGG 58.980 55.000 0.00 0.00 39.55 4.94
1392 1410 7.097192 GCTATATAATAGGCTGTGTTGCTACA 58.903 38.462 0.00 0.00 0.00 2.74
1437 1455 1.679680 CTCCATCGCAATTGCCAGAAT 59.320 47.619 24.24 10.17 37.91 2.40
1458 1476 0.737367 TCGAGCAAGAACCATCAGCG 60.737 55.000 0.00 0.00 35.00 5.18
1524 1542 2.117137 GCAATTTCATCTGCTCATGCG 58.883 47.619 0.00 0.00 43.34 4.73
1527 1545 1.001624 TTTCATCTGCTCATGCGTCG 58.998 50.000 0.00 0.00 43.34 5.12
1610 1628 3.192633 CCAAGGTAACATTTTCTTCCCCG 59.807 47.826 0.00 0.00 41.41 5.73
1611 1629 3.801307 AGGTAACATTTTCTTCCCCGT 57.199 42.857 0.00 0.00 41.41 5.28
1612 1630 3.418047 AGGTAACATTTTCTTCCCCGTG 58.582 45.455 0.00 0.00 41.41 4.94
1616 1639 5.221283 GGTAACATTTTCTTCCCCGTGAAAA 60.221 40.000 0.00 0.00 43.40 2.29
1645 1668 0.391597 TTCGACTGAACCACCTCCAC 59.608 55.000 0.00 0.00 0.00 4.02
1663 1686 3.384789 TCCACGAGCAGTTTAGCTATGAT 59.615 43.478 0.00 0.00 46.75 2.45
1672 1695 5.221106 GCAGTTTAGCTATGATGATTTGGCA 60.221 40.000 0.00 0.00 0.00 4.92
1754 1867 8.198109 ACGTACATTAGATCATTTTACTCTGCT 58.802 33.333 0.00 0.00 0.00 4.24
1771 1885 1.493446 TGCTCCTGGATGAGATGCAAT 59.507 47.619 0.00 0.00 34.11 3.56
1784 1898 8.192774 GGATGAGATGCAATGTTTTGAATTCTA 58.807 33.333 7.05 0.00 30.73 2.10
1789 1903 5.782047 TGCAATGTTTTGAATTCTACCTGG 58.218 37.500 7.05 0.00 34.60 4.45
1795 1909 6.568869 TGTTTTGAATTCTACCTGGTGTTTG 58.431 36.000 10.23 0.00 0.00 2.93
1801 1915 6.262273 TGAATTCTACCTGGTGTTTGAAGTTC 59.738 38.462 10.23 12.59 0.00 3.01
1818 1932 7.562454 TGAAGTTCCGAAGTAACAAGATTTT 57.438 32.000 0.00 0.00 0.00 1.82
1882 1996 3.321968 AGTTGGCCTTGGATTGTTTCTTC 59.678 43.478 3.32 0.00 0.00 2.87
1921 2035 1.880027 GGGAATGTGTGGATATTCGGC 59.120 52.381 0.00 0.00 34.83 5.54
1939 2053 2.435059 GGCCGCTCTTCTGTCCAC 60.435 66.667 0.00 0.00 0.00 4.02
1962 2076 2.029290 ACGCTCCTAACTTGTACAGGTG 60.029 50.000 11.83 3.76 0.00 4.00
1963 2077 2.029290 CGCTCCTAACTTGTACAGGTGT 60.029 50.000 11.83 4.93 0.00 4.16
1982 2096 1.165907 TGTGTGTTGCTAGGTGCTGC 61.166 55.000 0.00 0.00 43.37 5.25
1983 2097 1.600636 TGTGTTGCTAGGTGCTGCC 60.601 57.895 0.00 0.00 43.37 4.85
1988 2102 3.214845 GCTAGGTGCTGCCCATGC 61.215 66.667 9.36 8.56 38.26 4.06
2003 2117 0.950836 CATGCCACGTTCCTTTCACA 59.049 50.000 0.00 0.00 0.00 3.58
2016 2130 3.132289 TCCTTTCACATCGGATGTACCTC 59.868 47.826 22.26 0.00 42.70 3.85
2275 2389 1.749258 GGAAGACAATGGCGGGGTC 60.749 63.158 0.00 0.00 0.00 4.46
2334 2448 0.599204 GAAGACGCCGTGAGTTTCCA 60.599 55.000 0.00 0.00 0.00 3.53
2335 2449 0.878961 AAGACGCCGTGAGTTTCCAC 60.879 55.000 0.00 0.00 0.00 4.02
2337 2451 2.030562 CGCCGTGAGTTTCCACCT 59.969 61.111 0.00 0.00 33.67 4.00
2338 2452 2.317609 CGCCGTGAGTTTCCACCTG 61.318 63.158 0.00 0.00 33.67 4.00
2342 2458 2.021457 CCGTGAGTTTCCACCTGTTTT 58.979 47.619 0.00 0.00 33.67 2.43
2344 2460 2.032924 CGTGAGTTTCCACCTGTTTTCC 59.967 50.000 0.00 0.00 33.67 3.13
2345 2461 2.032924 GTGAGTTTCCACCTGTTTTCCG 59.967 50.000 0.00 0.00 0.00 4.30
2351 2467 2.211806 TCCACCTGTTTTCCGTTTACG 58.788 47.619 0.00 0.00 39.44 3.18
2354 2470 1.869132 ACCTGTTTTCCGTTTACGCTC 59.131 47.619 0.00 0.00 38.18 5.03
2366 2482 4.701663 ACGCTCATCAAGTGTGGG 57.298 55.556 0.00 0.00 46.90 4.61
2369 2485 1.012086 CGCTCATCAAGTGTGGGATG 58.988 55.000 0.00 0.00 41.73 3.51
2370 2486 1.405933 CGCTCATCAAGTGTGGGATGA 60.406 52.381 0.00 0.00 45.55 2.92
2372 2488 2.877168 GCTCATCAAGTGTGGGATGATC 59.123 50.000 4.95 0.00 46.26 2.92
2374 2490 4.778579 CTCATCAAGTGTGGGATGATCTT 58.221 43.478 4.95 0.00 46.26 2.40
2375 2491 4.520179 TCATCAAGTGTGGGATGATCTTG 58.480 43.478 0.00 0.00 43.56 3.02
2377 2493 3.678289 TCAAGTGTGGGATGATCTTGTG 58.322 45.455 0.00 0.00 37.39 3.33
2378 2494 2.119801 AGTGTGGGATGATCTTGTGC 57.880 50.000 0.00 0.00 0.00 4.57
2379 2495 1.352017 AGTGTGGGATGATCTTGTGCA 59.648 47.619 0.00 0.00 0.00 4.57
2380 2496 1.470098 GTGTGGGATGATCTTGTGCAC 59.530 52.381 10.75 10.75 0.00 4.57
2381 2497 1.073603 TGTGGGATGATCTTGTGCACA 59.926 47.619 17.42 17.42 0.00 4.57
2382 2498 1.470098 GTGGGATGATCTTGTGCACAC 59.530 52.381 21.56 8.79 0.00 3.82
2383 2499 1.098050 GGGATGATCTTGTGCACACC 58.902 55.000 21.56 15.35 0.00 4.16
2385 2501 2.372264 GGATGATCTTGTGCACACCAT 58.628 47.619 21.56 19.06 0.00 3.55
2386 2502 2.098607 GGATGATCTTGTGCACACCATG 59.901 50.000 21.56 10.34 0.00 3.66
2387 2503 2.275134 TGATCTTGTGCACACCATGT 57.725 45.000 21.56 3.95 0.00 3.21
2388 2504 2.153645 TGATCTTGTGCACACCATGTC 58.846 47.619 21.56 13.57 0.00 3.06
2389 2505 1.470098 GATCTTGTGCACACCATGTCC 59.530 52.381 21.56 1.52 0.00 4.02
2390 2506 0.182299 TCTTGTGCACACCATGTCCA 59.818 50.000 21.56 0.47 0.00 4.02
2394 2524 3.737172 GCACACCATGTCCACGGC 61.737 66.667 0.00 0.00 0.00 5.68
2398 2528 1.192146 ACACCATGTCCACGGCTAGT 61.192 55.000 0.00 0.00 0.00 2.57
2402 2532 1.134401 CCATGTCCACGGCTAGTTGAT 60.134 52.381 0.00 0.00 0.00 2.57
2408 2538 1.480954 CCACGGCTAGTTGATACCTGT 59.519 52.381 0.00 0.00 0.00 4.00
2411 2541 3.031736 ACGGCTAGTTGATACCTGTGAT 58.968 45.455 0.00 0.00 0.00 3.06
2625 2755 0.318120 GGCCAACACCAACAGAATGG 59.682 55.000 0.00 0.00 43.62 3.16
2644 2774 1.627297 GGAACAGGGAAGGAGGCGAT 61.627 60.000 0.00 0.00 0.00 4.58
2677 2807 1.728971 CGGTAGCTGTTCTTCTGCTTG 59.271 52.381 0.00 0.00 46.51 4.01
2700 2830 2.341452 CATGAGCATGGGCATGAGG 58.659 57.895 0.00 0.00 43.43 3.86
2701 2831 0.179001 CATGAGCATGGGCATGAGGA 60.179 55.000 0.00 0.00 43.43 3.71
2702 2832 0.778083 ATGAGCATGGGCATGAGGAT 59.222 50.000 0.00 0.00 44.61 3.24
2723 2853 2.281208 TGGAACACGCCCTTTCGG 60.281 61.111 0.00 0.00 0.00 4.30
2724 2854 2.281276 GGAACACGCCCTTTCGGT 60.281 61.111 0.00 0.00 0.00 4.69
2763 2893 5.008217 CCAACTCCTGATTTTACGTGACAAA 59.992 40.000 0.00 0.00 0.00 2.83
2890 3020 1.176527 AATGTGGCATTCACCGGAAG 58.823 50.000 9.46 0.00 45.48 3.46
3002 3133 5.413213 TGTAACTAATTAATGCCGCACTTGT 59.587 36.000 0.00 0.00 0.00 3.16
3021 3152 4.436242 TGTGTCCATTCGAGAGTCTTAC 57.564 45.455 0.00 0.00 0.00 2.34
3024 3155 4.859798 GTGTCCATTCGAGAGTCTTACTTG 59.140 45.833 0.00 0.00 0.00 3.16
3075 3206 7.643123 ACTCAAATATCAGGGTTACATTCCTT 58.357 34.615 0.00 0.00 0.00 3.36
3103 3234 2.737359 GCGATTTACGACCACATCTGGA 60.737 50.000 0.00 0.00 45.77 3.86
3107 3238 5.657474 GATTTACGACCACATCTGGACTAA 58.343 41.667 0.00 0.00 40.55 2.24
3108 3239 4.445452 TTACGACCACATCTGGACTAAC 57.555 45.455 0.00 0.00 40.55 2.34
3109 3240 2.244695 ACGACCACATCTGGACTAACA 58.755 47.619 0.00 0.00 40.55 2.41
3110 3241 2.231478 ACGACCACATCTGGACTAACAG 59.769 50.000 0.00 0.00 40.55 3.16
3119 3250 3.986277 TCTGGACTAACAGAACGTTTCC 58.014 45.455 0.46 3.94 44.03 3.13
3120 3251 2.729882 CTGGACTAACAGAACGTTTCCG 59.270 50.000 0.46 0.00 37.33 4.30
3121 3252 2.064014 GGACTAACAGAACGTTTCCGG 58.936 52.381 0.46 0.00 39.14 5.14
3122 3253 2.546584 GGACTAACAGAACGTTTCCGGT 60.547 50.000 0.46 0.00 39.14 5.28
3123 3254 2.473984 GACTAACAGAACGTTTCCGGTG 59.526 50.000 0.46 0.00 39.14 4.94
3124 3255 2.101249 ACTAACAGAACGTTTCCGGTGA 59.899 45.455 0.46 0.00 39.14 4.02
3125 3256 2.027003 AACAGAACGTTTCCGGTGAA 57.973 45.000 0.46 0.00 38.78 3.18
3126 3257 2.249844 ACAGAACGTTTCCGGTGAAT 57.750 45.000 0.46 0.00 38.78 2.57
3127 3258 1.871039 ACAGAACGTTTCCGGTGAATG 59.129 47.619 0.46 6.17 38.78 2.67
3128 3259 0.872388 AGAACGTTTCCGGTGAATGC 59.128 50.000 0.46 0.00 38.78 3.56
3129 3260 0.589223 GAACGTTTCCGGTGAATGCA 59.411 50.000 0.46 0.00 38.78 3.96
3130 3261 0.591170 AACGTTTCCGGTGAATGCAG 59.409 50.000 0.00 0.00 38.78 4.41
3131 3262 0.250124 ACGTTTCCGGTGAATGCAGA 60.250 50.000 0.00 0.00 38.78 4.26
3132 3263 0.871722 CGTTTCCGGTGAATGCAGAA 59.128 50.000 0.00 0.00 0.00 3.02
3133 3264 1.265635 CGTTTCCGGTGAATGCAGAAA 59.734 47.619 0.00 0.00 0.00 2.52
3134 3265 2.665519 CGTTTCCGGTGAATGCAGAAAG 60.666 50.000 0.00 0.00 0.00 2.62
3135 3266 0.881118 TTCCGGTGAATGCAGAAAGC 59.119 50.000 0.00 0.00 45.96 3.51
3136 3267 0.036732 TCCGGTGAATGCAGAAAGCT 59.963 50.000 0.00 0.00 45.94 3.74
3137 3268 0.449388 CCGGTGAATGCAGAAAGCTC 59.551 55.000 0.00 0.00 45.94 4.09
3138 3269 1.159285 CGGTGAATGCAGAAAGCTCA 58.841 50.000 0.00 0.00 45.94 4.26
3139 3270 1.741706 CGGTGAATGCAGAAAGCTCAT 59.258 47.619 0.00 0.00 45.94 2.90
3140 3271 2.477357 CGGTGAATGCAGAAAGCTCATG 60.477 50.000 0.00 0.00 45.94 3.07
3141 3272 2.751259 GGTGAATGCAGAAAGCTCATGA 59.249 45.455 0.00 0.00 45.94 3.07
3142 3273 3.427233 GGTGAATGCAGAAAGCTCATGAC 60.427 47.826 0.00 0.00 45.94 3.06
3143 3274 3.439476 GTGAATGCAGAAAGCTCATGACT 59.561 43.478 0.00 0.00 45.94 3.41
3144 3275 3.688185 TGAATGCAGAAAGCTCATGACTC 59.312 43.478 0.00 0.00 45.94 3.36
3145 3276 3.630892 ATGCAGAAAGCTCATGACTCT 57.369 42.857 0.00 0.00 45.94 3.24
3146 3277 4.750021 ATGCAGAAAGCTCATGACTCTA 57.250 40.909 0.00 0.00 45.94 2.43
3147 3278 4.541973 TGCAGAAAGCTCATGACTCTAA 57.458 40.909 0.00 0.00 45.94 2.10
3148 3279 4.248859 TGCAGAAAGCTCATGACTCTAAC 58.751 43.478 0.00 0.00 45.94 2.34
3153 3284 6.373774 CAGAAAGCTCATGACTCTAACCAAAT 59.626 38.462 0.00 0.00 0.00 2.32
3154 3285 6.373774 AGAAAGCTCATGACTCTAACCAAATG 59.626 38.462 0.00 0.00 0.00 2.32
3156 3287 5.181748 AGCTCATGACTCTAACCAAATGAC 58.818 41.667 0.00 0.00 0.00 3.06
3161 3292 4.065088 TGACTCTAACCAAATGACAGTGC 58.935 43.478 0.00 0.00 0.00 4.40
3168 3299 3.472652 ACCAAATGACAGTGCGTTTCTA 58.527 40.909 0.00 0.00 0.00 2.10
3170 3301 4.336993 ACCAAATGACAGTGCGTTTCTAAA 59.663 37.500 0.00 0.00 0.00 1.85
3171 3302 4.675114 CCAAATGACAGTGCGTTTCTAAAC 59.325 41.667 0.00 0.00 35.59 2.01
3172 3303 5.270083 CAAATGACAGTGCGTTTCTAAACA 58.730 37.500 6.41 0.00 38.81 2.83
3173 3304 5.493133 AATGACAGTGCGTTTCTAAACAA 57.507 34.783 6.41 0.00 38.81 2.83
3246 3432 7.765695 TGGATTCATAGTTGAAAGAGCTTTT 57.234 32.000 0.00 0.00 44.70 2.27
3333 3523 9.183824 AGCCTAAAATAGAGGGGTCTAATAAAT 57.816 33.333 0.00 0.00 34.35 1.40
3335 3525 9.654663 CCTAAAATAGAGGGGTCTAATAAATCG 57.345 37.037 0.00 0.00 0.00 3.34
3338 3528 4.209154 AGAGGGGTCTAATAAATCGGGA 57.791 45.455 0.00 0.00 0.00 5.14
3350 3540 6.402456 AATAAATCGGGACAGAGGTAGTAC 57.598 41.667 0.00 0.00 0.00 2.73
3360 3550 1.742268 AGAGGTAGTACCGAAGTTCGC 59.258 52.381 19.86 6.51 44.90 4.70
3361 3551 0.813821 AGGTAGTACCGAAGTTCGCC 59.186 55.000 19.86 13.67 44.90 5.54
3368 3558 0.661020 ACCGAAGTTCGCCAACAAAG 59.339 50.000 19.86 6.09 38.82 2.77
3380 3570 3.967332 CCAACAAAGGCTTCCATGATT 57.033 42.857 0.00 0.00 0.00 2.57
3381 3571 4.276058 CCAACAAAGGCTTCCATGATTT 57.724 40.909 0.00 0.00 0.00 2.17
3382 3572 4.644498 CCAACAAAGGCTTCCATGATTTT 58.356 39.130 0.00 0.00 0.00 1.82
3383 3573 4.453136 CCAACAAAGGCTTCCATGATTTTG 59.547 41.667 0.00 0.00 0.00 2.44
3384 3574 5.299148 CAACAAAGGCTTCCATGATTTTGA 58.701 37.500 0.00 0.00 31.79 2.69
3385 3575 5.143376 ACAAAGGCTTCCATGATTTTGAG 57.857 39.130 0.00 0.00 31.79 3.02
3386 3576 4.590222 ACAAAGGCTTCCATGATTTTGAGT 59.410 37.500 0.00 0.00 31.79 3.41
3387 3577 5.070847 ACAAAGGCTTCCATGATTTTGAGTT 59.929 36.000 0.00 0.00 31.79 3.01
3388 3578 5.397142 AAGGCTTCCATGATTTTGAGTTC 57.603 39.130 0.00 0.00 0.00 3.01
3389 3579 3.441572 AGGCTTCCATGATTTTGAGTTCG 59.558 43.478 0.00 0.00 0.00 3.95
3390 3580 3.440173 GGCTTCCATGATTTTGAGTTCGA 59.560 43.478 0.00 0.00 0.00 3.71
3391 3581 4.406943 GCTTCCATGATTTTGAGTTCGAC 58.593 43.478 0.00 0.00 0.00 4.20
3392 3582 4.641954 CTTCCATGATTTTGAGTTCGACG 58.358 43.478 0.00 0.00 0.00 5.12
3393 3583 2.415168 TCCATGATTTTGAGTTCGACGC 59.585 45.455 0.00 0.00 0.00 5.19
3402 3592 1.538075 TGAGTTCGACGCACATGAGTA 59.462 47.619 0.00 0.00 0.00 2.59
3403 3593 2.030628 TGAGTTCGACGCACATGAGTAA 60.031 45.455 0.00 0.00 0.00 2.24
3404 3594 3.179830 GAGTTCGACGCACATGAGTAAT 58.820 45.455 0.00 0.00 0.00 1.89
3407 3597 3.768468 TCGACGCACATGAGTAATACA 57.232 42.857 0.00 0.00 0.00 2.29
3415 3605 7.906160 ACGCACATGAGTAATACAAGTATTTC 58.094 34.615 10.41 6.20 37.07 2.17
3421 3611 9.314321 CATGAGTAATACAAGTATTTCGTTCCT 57.686 33.333 10.41 0.00 37.07 3.36
3423 3613 7.977853 TGAGTAATACAAGTATTTCGTTCCTCC 59.022 37.037 10.41 0.00 37.07 4.30
3424 3614 7.844009 AGTAATACAAGTATTTCGTTCCTCCA 58.156 34.615 10.41 0.00 37.07 3.86
3425 3615 7.980099 AGTAATACAAGTATTTCGTTCCTCCAG 59.020 37.037 10.41 0.00 37.07 3.86
3426 3616 3.335579 ACAAGTATTTCGTTCCTCCAGC 58.664 45.455 0.00 0.00 0.00 4.85
3427 3617 3.008049 ACAAGTATTTCGTTCCTCCAGCT 59.992 43.478 0.00 0.00 0.00 4.24
3428 3618 3.983044 AGTATTTCGTTCCTCCAGCTT 57.017 42.857 0.00 0.00 0.00 3.74
3429 3619 3.863041 AGTATTTCGTTCCTCCAGCTTC 58.137 45.455 0.00 0.00 0.00 3.86
3430 3620 2.859165 ATTTCGTTCCTCCAGCTTCA 57.141 45.000 0.00 0.00 0.00 3.02
3431 3621 1.878953 TTTCGTTCCTCCAGCTTCAC 58.121 50.000 0.00 0.00 0.00 3.18
3432 3622 0.756294 TTCGTTCCTCCAGCTTCACA 59.244 50.000 0.00 0.00 0.00 3.58
3451 3641 6.468333 TCACATTTATTTCATCCACCATGG 57.532 37.500 11.19 11.19 39.43 3.66
3476 3666 7.865385 GGAAGTGTATCTTGATCTATCAGTGTC 59.135 40.741 0.00 0.00 38.19 3.67
3480 3670 4.298744 TCTTGATCTATCAGTGTCGCTG 57.701 45.455 7.09 7.09 46.34 5.18
3487 3677 0.957395 ATCAGTGTCGCTGGCCTTTG 60.957 55.000 13.36 0.00 45.08 2.77
3501 3691 4.095946 TGGCCTTTGGAAGATTAAATGCT 58.904 39.130 3.32 0.00 31.11 3.79
3513 3703 8.189709 GAAGATTAAATGCTTCCAAACAATCC 57.810 34.615 0.00 0.00 35.60 3.01
3519 3709 2.224523 TGCTTCCAAACAATCCGTCTCT 60.225 45.455 0.00 0.00 0.00 3.10
3527 3717 6.051717 CCAAACAATCCGTCTCTATCAGAAT 58.948 40.000 0.00 0.00 30.72 2.40
3529 3719 7.254590 CCAAACAATCCGTCTCTATCAGAATTC 60.255 40.741 0.00 0.00 30.72 2.17
3543 3733 8.144478 TCTATCAGAATTCGGAAATTACTCCAG 58.856 37.037 12.38 0.55 35.21 3.86
3544 3734 6.294361 TCAGAATTCGGAAATTACTCCAGA 57.706 37.500 5.77 0.00 35.21 3.86
3545 3735 6.106673 TCAGAATTCGGAAATTACTCCAGAC 58.893 40.000 5.77 0.00 35.21 3.51
3546 3736 5.294552 CAGAATTCGGAAATTACTCCAGACC 59.705 44.000 0.00 0.00 35.21 3.85
3547 3737 5.189934 AGAATTCGGAAATTACTCCAGACCT 59.810 40.000 0.00 0.00 35.21 3.85
3548 3738 6.383147 AGAATTCGGAAATTACTCCAGACCTA 59.617 38.462 0.00 0.00 35.21 3.08
3549 3739 6.555463 ATTCGGAAATTACTCCAGACCTAA 57.445 37.500 0.00 0.00 34.91 2.69
3550 3740 6.363167 TTCGGAAATTACTCCAGACCTAAA 57.637 37.500 0.00 0.00 34.91 1.85
3551 3741 5.727434 TCGGAAATTACTCCAGACCTAAAC 58.273 41.667 0.00 0.00 34.91 2.01
3552 3742 4.874396 CGGAAATTACTCCAGACCTAAACC 59.126 45.833 0.00 0.00 34.91 3.27
3553 3743 5.570034 CGGAAATTACTCCAGACCTAAACCA 60.570 44.000 0.00 0.00 34.91 3.67
3554 3744 5.646793 GGAAATTACTCCAGACCTAAACCAC 59.353 44.000 0.00 0.00 35.36 4.16
3555 3745 3.947910 TTACTCCAGACCTAAACCACG 57.052 47.619 0.00 0.00 0.00 4.94
3556 3746 1.713297 ACTCCAGACCTAAACCACGT 58.287 50.000 0.00 0.00 0.00 4.49
3557 3747 2.880443 ACTCCAGACCTAAACCACGTA 58.120 47.619 0.00 0.00 0.00 3.57
3558 3748 2.560105 ACTCCAGACCTAAACCACGTAC 59.440 50.000 0.00 0.00 0.00 3.67
3559 3749 1.541147 TCCAGACCTAAACCACGTACG 59.459 52.381 15.01 15.01 0.00 3.67
3560 3750 1.403249 CCAGACCTAAACCACGTACGG 60.403 57.143 21.06 8.46 0.00 4.02
3561 3751 1.541147 CAGACCTAAACCACGTACGGA 59.459 52.381 21.06 0.00 0.00 4.69
3562 3752 2.165030 CAGACCTAAACCACGTACGGAT 59.835 50.000 21.06 0.82 0.00 4.18
3563 3753 3.378112 CAGACCTAAACCACGTACGGATA 59.622 47.826 21.06 4.14 0.00 2.59
3564 3754 3.629398 AGACCTAAACCACGTACGGATAG 59.371 47.826 21.06 12.79 0.00 2.08
3565 3755 2.099756 ACCTAAACCACGTACGGATAGC 59.900 50.000 21.06 0.00 0.00 2.97
3566 3756 2.544486 CCTAAACCACGTACGGATAGCC 60.544 54.545 21.06 0.00 0.00 3.93
3567 3757 1.188863 AAACCACGTACGGATAGCCT 58.811 50.000 21.06 0.00 0.00 4.58
3568 3758 1.188863 AACCACGTACGGATAGCCTT 58.811 50.000 21.06 0.00 0.00 4.35
3569 3759 0.743097 ACCACGTACGGATAGCCTTC 59.257 55.000 21.06 0.00 0.00 3.46
3570 3760 0.031721 CCACGTACGGATAGCCTTCC 59.968 60.000 21.06 0.00 0.00 3.46
3571 3761 0.742505 CACGTACGGATAGCCTTCCA 59.257 55.000 21.06 0.00 35.34 3.53
3572 3762 1.340248 CACGTACGGATAGCCTTCCAT 59.660 52.381 21.06 0.00 35.34 3.41
3573 3763 2.555325 CACGTACGGATAGCCTTCCATA 59.445 50.000 21.06 0.00 35.34 2.74
3574 3764 2.818432 ACGTACGGATAGCCTTCCATAG 59.182 50.000 21.06 0.00 35.34 2.23
3575 3765 3.079578 CGTACGGATAGCCTTCCATAGA 58.920 50.000 7.57 0.00 35.34 1.98
3576 3766 3.119919 CGTACGGATAGCCTTCCATAGAC 60.120 52.174 7.57 0.00 35.34 2.59
3577 3767 2.249139 ACGGATAGCCTTCCATAGACC 58.751 52.381 0.00 0.00 35.34 3.85
3578 3768 1.550976 CGGATAGCCTTCCATAGACCC 59.449 57.143 0.00 0.00 35.34 4.46
3579 3769 2.621070 GGATAGCCTTCCATAGACCCA 58.379 52.381 0.00 0.00 35.72 4.51
3580 3770 2.303311 GGATAGCCTTCCATAGACCCAC 59.697 54.545 0.00 0.00 35.72 4.61
3581 3771 2.561209 TAGCCTTCCATAGACCCACA 57.439 50.000 0.00 0.00 0.00 4.17
3582 3772 0.912486 AGCCTTCCATAGACCCACAC 59.088 55.000 0.00 0.00 0.00 3.82
3583 3773 0.912486 GCCTTCCATAGACCCACACT 59.088 55.000 0.00 0.00 0.00 3.55
3584 3774 1.282157 GCCTTCCATAGACCCACACTT 59.718 52.381 0.00 0.00 0.00 3.16
3585 3775 2.941415 GCCTTCCATAGACCCACACTTG 60.941 54.545 0.00 0.00 0.00 3.16
3586 3776 2.571653 CCTTCCATAGACCCACACTTGA 59.428 50.000 0.00 0.00 0.00 3.02
3587 3777 3.009033 CCTTCCATAGACCCACACTTGAA 59.991 47.826 0.00 0.00 0.00 2.69
3588 3778 3.695830 TCCATAGACCCACACTTGAAC 57.304 47.619 0.00 0.00 0.00 3.18
3589 3779 2.304761 TCCATAGACCCACACTTGAACC 59.695 50.000 0.00 0.00 0.00 3.62
3590 3780 2.039746 CCATAGACCCACACTTGAACCA 59.960 50.000 0.00 0.00 0.00 3.67
3591 3781 3.338249 CATAGACCCACACTTGAACCAG 58.662 50.000 0.00 0.00 0.00 4.00
3592 3782 1.507140 AGACCCACACTTGAACCAGA 58.493 50.000 0.00 0.00 0.00 3.86
3593 3783 1.141053 AGACCCACACTTGAACCAGAC 59.859 52.381 0.00 0.00 0.00 3.51
3594 3784 1.141053 GACCCACACTTGAACCAGACT 59.859 52.381 0.00 0.00 0.00 3.24
3595 3785 1.134098 ACCCACACTTGAACCAGACTG 60.134 52.381 0.00 0.00 0.00 3.51
3596 3786 1.140852 CCCACACTTGAACCAGACTGA 59.859 52.381 3.32 0.00 0.00 3.41
3597 3787 2.224621 CCCACACTTGAACCAGACTGAT 60.225 50.000 3.32 0.00 0.00 2.90
3598 3788 2.810274 CCACACTTGAACCAGACTGATG 59.190 50.000 3.32 0.00 0.00 3.07
3599 3789 2.810274 CACACTTGAACCAGACTGATGG 59.190 50.000 3.32 2.79 46.47 3.51
3609 3799 2.601664 GACTGATGGTCAGGCCTCT 58.398 57.895 0.00 0.00 46.78 3.69
3610 3800 0.908198 GACTGATGGTCAGGCCTCTT 59.092 55.000 0.00 0.00 46.78 2.85
3611 3801 1.280421 GACTGATGGTCAGGCCTCTTT 59.720 52.381 0.00 0.00 46.78 2.52
3612 3802 2.290577 GACTGATGGTCAGGCCTCTTTT 60.291 50.000 0.00 0.00 46.78 2.27
3613 3803 2.800250 CTGATGGTCAGGCCTCTTTTT 58.200 47.619 0.00 0.00 40.71 1.94
3634 3824 6.701145 TTTTTGTTGTATGCCTCTTGTACA 57.299 33.333 0.00 0.00 0.00 2.90
3635 3825 6.892658 TTTTGTTGTATGCCTCTTGTACAT 57.107 33.333 0.00 0.00 0.00 2.29
3636 3826 6.892658 TTTGTTGTATGCCTCTTGTACATT 57.107 33.333 0.00 0.00 0.00 2.71
3637 3827 6.494893 TTGTTGTATGCCTCTTGTACATTC 57.505 37.500 0.00 0.00 0.00 2.67
3638 3828 5.804639 TGTTGTATGCCTCTTGTACATTCT 58.195 37.500 0.00 0.00 0.00 2.40
3639 3829 6.237901 TGTTGTATGCCTCTTGTACATTCTT 58.762 36.000 0.00 0.00 0.00 2.52
3640 3830 6.714810 TGTTGTATGCCTCTTGTACATTCTTT 59.285 34.615 0.00 0.00 0.00 2.52
3641 3831 7.880713 TGTTGTATGCCTCTTGTACATTCTTTA 59.119 33.333 0.00 0.00 0.00 1.85
3642 3832 8.893727 GTTGTATGCCTCTTGTACATTCTTTAT 58.106 33.333 0.00 0.00 0.00 1.40
3643 3833 8.662781 TGTATGCCTCTTGTACATTCTTTATC 57.337 34.615 0.00 0.00 0.00 1.75
3644 3834 8.486210 TGTATGCCTCTTGTACATTCTTTATCT 58.514 33.333 0.00 0.00 0.00 1.98
3645 3835 9.982651 GTATGCCTCTTGTACATTCTTTATCTA 57.017 33.333 0.00 0.00 0.00 1.98
3652 3842 9.678941 TCTTGTACATTCTTTATCTATAGTGCG 57.321 33.333 0.00 0.00 0.00 5.34
3653 3843 9.678941 CTTGTACATTCTTTATCTATAGTGCGA 57.321 33.333 0.00 0.00 0.00 5.10
3655 3845 9.678941 TGTACATTCTTTATCTATAGTGCGAAG 57.321 33.333 0.00 1.50 0.00 3.79
3656 3846 9.130312 GTACATTCTTTATCTATAGTGCGAAGG 57.870 37.037 0.00 2.39 0.00 3.46
3657 3847 6.647067 ACATTCTTTATCTATAGTGCGAAGGC 59.353 38.462 0.00 0.00 40.52 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 0.034670 GAATCAGCAAGCCCAGAGGT 60.035 55.000 0.00 0.00 34.57 3.85
24 25 0.095935 CCTGAACGCGAATCAGCAAG 59.904 55.000 28.75 17.87 42.36 4.01
60 61 4.350368 TCCAGTAGCTCACAACAATTCA 57.650 40.909 0.00 0.00 0.00 2.57
236 244 5.056480 CCTAATCATCAACGCTCACCATTA 58.944 41.667 0.00 0.00 0.00 1.90
362 371 6.485313 ACCGTAGAAACAAAGATCAATTGTGA 59.515 34.615 15.14 0.00 39.98 3.58
384 393 4.509616 TCCAATGTAACATCTACCAACCG 58.490 43.478 0.00 0.00 0.00 4.44
412 421 8.875168 AGTAGGAACTTAGGAATGATAGGATTG 58.125 37.037 0.00 0.00 41.75 2.67
422 431 5.876357 TGCAACAAGTAGGAACTTAGGAAT 58.124 37.500 0.00 0.00 44.28 3.01
439 448 0.758310 TTTCCCAGTGGCATGCAACA 60.758 50.000 26.79 10.34 0.00 3.33
568 577 9.616156 TGCAAATTTTGGCATTATAGAATCAAT 57.384 25.926 10.96 0.00 34.58 2.57
932 950 0.247736 AGCGGCTGTAGACTGGAAAG 59.752 55.000 0.00 0.00 0.00 2.62
941 959 0.037326 TTCAACAGGAGCGGCTGTAG 60.037 55.000 7.50 0.00 32.95 2.74
1091 1109 7.414540 GGTTCAACTCATCCAACTGATTATGAC 60.415 40.741 0.00 0.00 0.00 3.06
1101 1119 1.234821 TGCGGTTCAACTCATCCAAC 58.765 50.000 0.00 0.00 0.00 3.77
1314 1332 4.564406 GGATGCTCATTCCTTGATACCGAT 60.564 45.833 0.00 0.00 32.72 4.18
1392 1410 3.701040 AGCGCCAATAAAGATGTGGAATT 59.299 39.130 2.29 0.00 34.05 2.17
1437 1455 2.799562 CGCTGATGGTTCTTGCTCGATA 60.800 50.000 0.00 0.00 0.00 2.92
1458 1476 2.489722 GTTCCTTTGAGATGAACCCTGC 59.510 50.000 0.00 0.00 33.85 4.85
1524 1542 2.669364 TCTTCGTTTACAGCTTCCGAC 58.331 47.619 0.00 0.00 0.00 4.79
1527 1545 6.476243 TTGTTATCTTCGTTTACAGCTTCC 57.524 37.500 0.00 0.00 0.00 3.46
1616 1639 4.995487 GTGGTTCAGTCGAAGAGGTTATTT 59.005 41.667 0.00 0.00 36.95 1.40
1619 1642 2.298163 GGTGGTTCAGTCGAAGAGGTTA 59.702 50.000 0.00 0.00 36.95 2.85
1621 1644 0.680061 GGTGGTTCAGTCGAAGAGGT 59.320 55.000 0.00 0.00 36.95 3.85
1622 1645 0.969894 AGGTGGTTCAGTCGAAGAGG 59.030 55.000 0.00 0.00 36.95 3.69
1645 1668 6.361114 CAAATCATCATAGCTAAACTGCTCG 58.639 40.000 0.00 0.00 42.97 5.03
1672 1695 8.428063 ACTCTCATTATTAGTTATGCAGAAGCT 58.572 33.333 0.00 0.00 42.74 3.74
1754 1867 3.657398 AACATTGCATCTCATCCAGGA 57.343 42.857 0.00 0.00 0.00 3.86
1771 1885 6.378564 TCAAACACCAGGTAGAATTCAAAACA 59.621 34.615 8.44 0.00 0.00 2.83
1784 1898 1.210967 TCGGAACTTCAAACACCAGGT 59.789 47.619 0.00 0.00 0.00 4.00
1789 1903 5.473796 TGTTACTTCGGAACTTCAAACAC 57.526 39.130 0.00 0.00 0.00 3.32
1818 1932 5.928264 GCGTAGACCCTACAGTAAAAAGAAA 59.072 40.000 5.17 0.00 0.00 2.52
1821 1935 4.813027 TGCGTAGACCCTACAGTAAAAAG 58.187 43.478 5.17 0.00 0.00 2.27
1826 1940 2.691526 CCAATGCGTAGACCCTACAGTA 59.308 50.000 5.17 0.00 0.00 2.74
1827 1941 1.480954 CCAATGCGTAGACCCTACAGT 59.519 52.381 5.17 0.00 0.00 3.55
1828 1942 1.480954 ACCAATGCGTAGACCCTACAG 59.519 52.381 5.17 0.07 0.00 2.74
1882 1996 1.585002 CACAACAAACCACACGGCG 60.585 57.895 4.80 4.80 34.57 6.46
1921 2035 4.069232 TGGACAGAAGAGCGGCCG 62.069 66.667 24.05 24.05 0.00 6.13
1933 2047 0.892358 AGTTAGGAGCGTCGTGGACA 60.892 55.000 0.00 0.00 32.09 4.02
1939 2053 2.516923 CTGTACAAGTTAGGAGCGTCG 58.483 52.381 0.00 0.00 0.00 5.12
1982 2096 0.893270 TGAAAGGAACGTGGCATGGG 60.893 55.000 12.05 0.00 0.00 4.00
1983 2097 0.240945 GTGAAAGGAACGTGGCATGG 59.759 55.000 12.05 0.00 0.00 3.66
1988 2102 0.796312 CCGATGTGAAAGGAACGTGG 59.204 55.000 0.00 0.00 0.00 4.94
2003 2117 4.202223 ACAAATAAGCGAGGTACATCCGAT 60.202 41.667 1.23 0.00 41.99 4.18
2016 2130 8.543774 TGAAAAATGGTTACAAACAAATAAGCG 58.456 29.630 0.00 0.00 32.63 4.68
2212 2326 5.562506 TCCTCATCGACTTGTACTTGTAG 57.437 43.478 0.00 0.00 0.00 2.74
2275 2389 1.450312 GTCGGTTCCAGATGCCAGG 60.450 63.158 0.00 0.00 0.00 4.45
2334 2448 1.869132 GAGCGTAAACGGAAAACAGGT 59.131 47.619 4.49 0.00 40.23 4.00
2335 2449 1.868498 TGAGCGTAAACGGAAAACAGG 59.132 47.619 4.49 0.00 40.23 4.00
2337 2451 3.132160 TGATGAGCGTAAACGGAAAACA 58.868 40.909 4.49 0.00 40.23 2.83
2338 2452 3.799137 TGATGAGCGTAAACGGAAAAC 57.201 42.857 4.49 0.00 40.23 2.43
2342 2458 2.288579 ACACTTGATGAGCGTAAACGGA 60.289 45.455 4.49 0.00 40.23 4.69
2344 2460 2.159841 CCACACTTGATGAGCGTAAACG 60.160 50.000 0.00 0.00 43.27 3.60
2345 2461 2.159627 CCCACACTTGATGAGCGTAAAC 59.840 50.000 0.00 0.00 0.00 2.01
2351 2467 2.408271 TCATCCCACACTTGATGAGC 57.592 50.000 0.00 0.00 41.72 4.26
2354 2470 4.095932 CACAAGATCATCCCACACTTGATG 59.904 45.833 0.00 0.00 39.84 3.07
2366 2482 2.751259 ACATGGTGTGCACAAGATCATC 59.249 45.455 23.59 6.99 0.00 2.92
2369 2485 1.470098 GGACATGGTGTGCACAAGATC 59.530 52.381 23.59 14.29 38.66 2.75
2370 2486 1.202915 TGGACATGGTGTGCACAAGAT 60.203 47.619 23.59 13.52 43.78 2.40
2372 2488 2.718094 TGGACATGGTGTGCACAAG 58.282 52.632 23.59 14.17 43.78 3.16
2377 2493 2.796483 TAGCCGTGGACATGGTGTGC 62.796 60.000 11.88 0.00 39.30 4.57
2378 2494 0.740868 CTAGCCGTGGACATGGTGTG 60.741 60.000 11.88 0.00 39.68 3.82
2379 2495 1.192146 ACTAGCCGTGGACATGGTGT 61.192 55.000 11.88 6.36 39.68 4.16
2380 2496 0.036388 AACTAGCCGTGGACATGGTG 60.036 55.000 11.88 5.82 39.68 4.17
2381 2497 0.036388 CAACTAGCCGTGGACATGGT 60.036 55.000 11.88 2.47 39.68 3.55
2382 2498 0.249120 TCAACTAGCCGTGGACATGG 59.751 55.000 6.19 6.19 40.47 3.66
2383 2499 2.315925 ATCAACTAGCCGTGGACATG 57.684 50.000 0.00 0.00 0.00 3.21
2385 2501 1.479323 GGTATCAACTAGCCGTGGACA 59.521 52.381 0.00 0.00 0.00 4.02
2386 2502 1.755380 AGGTATCAACTAGCCGTGGAC 59.245 52.381 0.00 0.00 0.00 4.02
2387 2503 1.754803 CAGGTATCAACTAGCCGTGGA 59.245 52.381 0.00 0.00 0.00 4.02
2388 2504 1.480954 ACAGGTATCAACTAGCCGTGG 59.519 52.381 0.00 0.00 0.00 4.94
2389 2505 2.165641 TCACAGGTATCAACTAGCCGTG 59.834 50.000 0.00 0.00 0.00 4.94
2390 2506 2.453521 TCACAGGTATCAACTAGCCGT 58.546 47.619 0.00 0.00 0.00 5.68
2394 2524 5.010516 CCAGAGGATCACAGGTATCAACTAG 59.989 48.000 0.00 0.00 37.82 2.57
2398 2528 3.041211 CCCAGAGGATCACAGGTATCAA 58.959 50.000 0.00 0.00 37.82 2.57
2402 2532 0.339859 AGCCCAGAGGATCACAGGTA 59.660 55.000 0.00 0.00 37.82 3.08
2411 2541 0.178891 ACCTGAAAGAGCCCAGAGGA 60.179 55.000 0.00 0.00 34.07 3.71
2521 2651 1.709147 GCGCGTTGATCTTGAGCCAT 61.709 55.000 8.43 0.00 0.00 4.40
2625 2755 1.627297 ATCGCCTCCTTCCCTGTTCC 61.627 60.000 0.00 0.00 0.00 3.62
2644 2774 1.873863 CTACCGCTGTGACTCGACA 59.126 57.895 0.00 0.00 0.00 4.35
2699 2829 1.823899 GGGCGTGTTCCATCCATCC 60.824 63.158 0.00 0.00 0.00 3.51
2700 2830 0.394352 AAGGGCGTGTTCCATCCATC 60.394 55.000 0.00 0.00 0.00 3.51
2701 2831 0.039618 AAAGGGCGTGTTCCATCCAT 59.960 50.000 0.00 0.00 0.00 3.41
2702 2832 0.608035 GAAAGGGCGTGTTCCATCCA 60.608 55.000 0.00 0.00 0.00 3.41
2763 2893 4.571372 GACTTGCGTCCTACTTATAGCT 57.429 45.455 0.00 0.00 33.98 3.32
2815 2945 7.665559 AGCAGGTGTGGGTATTTACAATATATG 59.334 37.037 0.00 0.00 0.00 1.78
2831 2961 1.550524 TCACTAGCTAAGCAGGTGTGG 59.449 52.381 9.21 0.00 35.83 4.17
3002 3133 4.523173 ACAAGTAAGACTCTCGAATGGACA 59.477 41.667 0.00 0.00 0.00 4.02
3021 3152 6.036626 ACAAAGTATTTTCCCGCAAAAACAAG 59.963 34.615 0.00 0.00 35.03 3.16
3024 3155 5.977171 ACAAAGTATTTTCCCGCAAAAAC 57.023 34.783 0.00 0.00 35.03 2.43
3075 3206 2.988493 GTGGTCGTAAATCGCTGTAACA 59.012 45.455 0.00 0.00 39.67 2.41
3114 3245 2.922335 GCTTTCTGCATTCACCGGAAAC 60.922 50.000 9.46 0.00 42.31 2.78
3115 3246 1.269448 GCTTTCTGCATTCACCGGAAA 59.731 47.619 9.46 1.65 42.31 3.13
3116 3247 0.881118 GCTTTCTGCATTCACCGGAA 59.119 50.000 9.46 0.00 42.31 4.30
3117 3248 0.036732 AGCTTTCTGCATTCACCGGA 59.963 50.000 9.46 0.00 45.94 5.14
3118 3249 0.449388 GAGCTTTCTGCATTCACCGG 59.551 55.000 0.00 0.00 45.94 5.28
3119 3250 1.159285 TGAGCTTTCTGCATTCACCG 58.841 50.000 0.00 0.00 45.94 4.94
3120 3251 2.751259 TCATGAGCTTTCTGCATTCACC 59.249 45.455 0.00 0.00 45.94 4.02
3121 3252 3.439476 AGTCATGAGCTTTCTGCATTCAC 59.561 43.478 0.00 0.00 45.94 3.18
3122 3253 3.682696 AGTCATGAGCTTTCTGCATTCA 58.317 40.909 0.00 0.00 45.94 2.57
3123 3254 3.940221 AGAGTCATGAGCTTTCTGCATTC 59.060 43.478 0.00 0.00 45.94 2.67
3124 3255 3.952931 AGAGTCATGAGCTTTCTGCATT 58.047 40.909 0.00 0.00 45.94 3.56
3125 3256 3.630892 AGAGTCATGAGCTTTCTGCAT 57.369 42.857 0.00 0.00 45.94 3.96
3126 3257 4.248859 GTTAGAGTCATGAGCTTTCTGCA 58.751 43.478 0.00 0.00 45.94 4.41
3127 3258 3.620821 GGTTAGAGTCATGAGCTTTCTGC 59.379 47.826 0.00 0.00 43.29 4.26
3128 3259 4.825422 TGGTTAGAGTCATGAGCTTTCTG 58.175 43.478 0.00 0.00 0.00 3.02
3129 3260 5.489792 TTGGTTAGAGTCATGAGCTTTCT 57.510 39.130 0.00 0.00 0.00 2.52
3130 3261 6.372659 TCATTTGGTTAGAGTCATGAGCTTTC 59.627 38.462 0.00 0.00 0.00 2.62
3131 3262 6.150140 GTCATTTGGTTAGAGTCATGAGCTTT 59.850 38.462 0.00 0.00 0.00 3.51
3132 3263 5.645497 GTCATTTGGTTAGAGTCATGAGCTT 59.355 40.000 0.00 0.00 0.00 3.74
3133 3264 5.181748 GTCATTTGGTTAGAGTCATGAGCT 58.818 41.667 0.00 0.00 0.00 4.09
3134 3265 4.937620 TGTCATTTGGTTAGAGTCATGAGC 59.062 41.667 0.00 0.00 0.00 4.26
3135 3266 6.091849 CACTGTCATTTGGTTAGAGTCATGAG 59.908 42.308 0.00 0.00 0.00 2.90
3136 3267 5.934043 CACTGTCATTTGGTTAGAGTCATGA 59.066 40.000 0.00 0.00 0.00 3.07
3137 3268 5.391310 GCACTGTCATTTGGTTAGAGTCATG 60.391 44.000 0.00 0.00 0.00 3.07
3138 3269 4.697352 GCACTGTCATTTGGTTAGAGTCAT 59.303 41.667 0.00 0.00 0.00 3.06
3139 3270 4.065088 GCACTGTCATTTGGTTAGAGTCA 58.935 43.478 0.00 0.00 0.00 3.41
3140 3271 3.123621 CGCACTGTCATTTGGTTAGAGTC 59.876 47.826 0.00 0.00 0.00 3.36
3141 3272 3.067106 CGCACTGTCATTTGGTTAGAGT 58.933 45.455 0.00 0.00 0.00 3.24
3142 3273 3.067106 ACGCACTGTCATTTGGTTAGAG 58.933 45.455 0.00 0.00 0.00 2.43
3143 3274 3.120321 ACGCACTGTCATTTGGTTAGA 57.880 42.857 0.00 0.00 0.00 2.10
3144 3275 3.896648 AACGCACTGTCATTTGGTTAG 57.103 42.857 0.00 0.00 0.00 2.34
3145 3276 3.880490 AGAAACGCACTGTCATTTGGTTA 59.120 39.130 0.00 0.00 0.00 2.85
3146 3277 2.687935 AGAAACGCACTGTCATTTGGTT 59.312 40.909 0.00 0.00 0.00 3.67
3147 3278 2.297701 AGAAACGCACTGTCATTTGGT 58.702 42.857 0.00 0.00 0.00 3.67
3148 3279 4.481930 TTAGAAACGCACTGTCATTTGG 57.518 40.909 0.00 0.00 0.00 3.28
3153 3284 3.936453 AGTTGTTTAGAAACGCACTGTCA 59.064 39.130 8.33 0.00 41.74 3.58
3154 3285 4.531659 AGTTGTTTAGAAACGCACTGTC 57.468 40.909 8.33 0.00 41.74 3.51
3156 3287 8.889000 GTTTTATAGTTGTTTAGAAACGCACTG 58.111 33.333 15.23 0.00 41.74 3.66
3224 3410 7.820648 TGGAAAAGCTCTTTCAACTATGAATC 58.179 34.615 17.41 3.61 44.70 2.52
3225 3411 7.765695 TGGAAAAGCTCTTTCAACTATGAAT 57.234 32.000 17.41 0.00 44.70 2.57
3296 3485 9.190317 CCCTCTATTTTAGGCTAAAGTTTGATT 57.810 33.333 18.41 4.05 32.34 2.57
3311 3500 8.599792 CCCGATTTATTAGACCCCTCTATTTTA 58.400 37.037 0.00 0.00 0.00 1.52
3333 3523 0.107508 CGGTACTACCTCTGTCCCGA 60.108 60.000 3.68 0.00 35.66 5.14
3335 3525 2.022934 CTTCGGTACTACCTCTGTCCC 58.977 57.143 3.68 0.00 35.66 4.46
3338 3528 2.746362 CGAACTTCGGTACTACCTCTGT 59.254 50.000 3.06 0.00 35.66 3.41
3350 3540 0.040425 CCTTTGTTGGCGAACTTCGG 60.040 55.000 13.01 6.25 40.84 4.30
3360 3550 3.967332 AATCATGGAAGCCTTTGTTGG 57.033 42.857 0.00 0.00 0.00 3.77
3361 3551 5.299148 TCAAAATCATGGAAGCCTTTGTTG 58.701 37.500 0.00 0.00 0.00 3.33
3368 3558 3.440173 TCGAACTCAAAATCATGGAAGCC 59.560 43.478 0.00 0.00 0.00 4.35
3370 3560 4.641954 CGTCGAACTCAAAATCATGGAAG 58.358 43.478 0.00 0.00 0.00 3.46
3371 3561 3.120338 GCGTCGAACTCAAAATCATGGAA 60.120 43.478 0.00 0.00 0.00 3.53
3373 3563 2.159430 TGCGTCGAACTCAAAATCATGG 59.841 45.455 0.00 0.00 0.00 3.66
3374 3564 3.155998 GTGCGTCGAACTCAAAATCATG 58.844 45.455 0.00 0.00 0.00 3.07
3375 3565 2.805671 TGTGCGTCGAACTCAAAATCAT 59.194 40.909 4.68 0.00 0.00 2.45
3376 3566 2.205911 TGTGCGTCGAACTCAAAATCA 58.794 42.857 4.68 0.00 0.00 2.57
3377 3567 2.941891 TGTGCGTCGAACTCAAAATC 57.058 45.000 4.68 0.00 0.00 2.17
3378 3568 2.805671 TCATGTGCGTCGAACTCAAAAT 59.194 40.909 4.68 0.00 0.00 1.82
3379 3569 2.205911 TCATGTGCGTCGAACTCAAAA 58.794 42.857 4.68 0.00 0.00 2.44
3380 3570 1.792367 CTCATGTGCGTCGAACTCAAA 59.208 47.619 4.68 0.00 0.00 2.69
3381 3571 1.269569 ACTCATGTGCGTCGAACTCAA 60.270 47.619 4.68 0.00 0.00 3.02
3382 3572 0.313987 ACTCATGTGCGTCGAACTCA 59.686 50.000 4.68 0.00 0.00 3.41
3383 3573 2.257974 TACTCATGTGCGTCGAACTC 57.742 50.000 4.68 0.00 0.00 3.01
3384 3574 2.717580 TTACTCATGTGCGTCGAACT 57.282 45.000 4.68 0.00 0.00 3.01
3385 3575 3.855379 TGTATTACTCATGTGCGTCGAAC 59.145 43.478 0.00 0.00 0.00 3.95
3386 3576 4.099380 TGTATTACTCATGTGCGTCGAA 57.901 40.909 0.00 0.00 0.00 3.71
3387 3577 3.768468 TGTATTACTCATGTGCGTCGA 57.232 42.857 0.00 0.00 0.00 4.20
3388 3578 3.857665 ACTTGTATTACTCATGTGCGTCG 59.142 43.478 0.00 0.00 0.00 5.12
3389 3579 7.464830 AATACTTGTATTACTCATGTGCGTC 57.535 36.000 4.39 0.00 0.00 5.19
3390 3580 7.253983 CGAAATACTTGTATTACTCATGTGCGT 60.254 37.037 6.46 0.00 0.00 5.24
3391 3581 7.057402 CGAAATACTTGTATTACTCATGTGCG 58.943 38.462 6.46 0.00 0.00 5.34
3392 3582 7.906160 ACGAAATACTTGTATTACTCATGTGC 58.094 34.615 6.46 0.00 0.00 4.57
3393 3583 9.901724 GAACGAAATACTTGTATTACTCATGTG 57.098 33.333 6.46 0.00 0.00 3.21
3402 3592 5.585047 GCTGGAGGAACGAAATACTTGTATT 59.415 40.000 0.00 0.60 0.00 1.89
3403 3593 5.104900 AGCTGGAGGAACGAAATACTTGTAT 60.105 40.000 0.00 0.00 0.00 2.29
3404 3594 4.222145 AGCTGGAGGAACGAAATACTTGTA 59.778 41.667 0.00 0.00 0.00 2.41
3407 3597 3.983044 AGCTGGAGGAACGAAATACTT 57.017 42.857 0.00 0.00 0.00 2.24
3415 3605 1.813513 AATGTGAAGCTGGAGGAACG 58.186 50.000 0.00 0.00 0.00 3.95
3421 3611 5.951148 TGGATGAAATAAATGTGAAGCTGGA 59.049 36.000 0.00 0.00 0.00 3.86
3423 3613 6.038356 GGTGGATGAAATAAATGTGAAGCTG 58.962 40.000 0.00 0.00 0.00 4.24
3424 3614 5.716228 TGGTGGATGAAATAAATGTGAAGCT 59.284 36.000 0.00 0.00 0.00 3.74
3425 3615 5.964758 TGGTGGATGAAATAAATGTGAAGC 58.035 37.500 0.00 0.00 0.00 3.86
3426 3616 6.982141 CCATGGTGGATGAAATAAATGTGAAG 59.018 38.462 2.57 0.00 40.96 3.02
3427 3617 6.666980 TCCATGGTGGATGAAATAAATGTGAA 59.333 34.615 12.58 0.00 42.67 3.18
3428 3618 6.193504 TCCATGGTGGATGAAATAAATGTGA 58.806 36.000 12.58 0.00 42.67 3.58
3429 3619 6.468333 TCCATGGTGGATGAAATAAATGTG 57.532 37.500 12.58 0.00 42.67 3.21
3451 3641 7.589587 CGACACTGATAGATCAAGATACACTTC 59.410 40.741 0.00 0.00 36.61 3.01
3476 3666 1.750193 TAATCTTCCAAAGGCCAGCG 58.250 50.000 5.01 0.00 0.00 5.18
3480 3670 4.743057 AGCATTTAATCTTCCAAAGGCC 57.257 40.909 0.00 0.00 41.12 5.19
3501 3691 5.186992 TCTGATAGAGACGGATTGTTTGGAA 59.813 40.000 0.00 0.00 0.00 3.53
3513 3703 7.863375 AGTAATTTCCGAATTCTGATAGAGACG 59.137 37.037 3.52 0.00 36.82 4.18
3519 3709 7.926555 GTCTGGAGTAATTTCCGAATTCTGATA 59.073 37.037 3.52 0.00 40.27 2.15
3527 3717 6.168389 GTTTAGGTCTGGAGTAATTTCCGAA 58.832 40.000 0.00 0.00 40.27 4.30
3529 3719 4.874396 GGTTTAGGTCTGGAGTAATTTCCG 59.126 45.833 0.00 0.00 40.27 4.30
3543 3733 2.947448 ATCCGTACGTGGTTTAGGTC 57.053 50.000 15.21 0.00 0.00 3.85
3544 3734 2.099756 GCTATCCGTACGTGGTTTAGGT 59.900 50.000 15.21 0.00 0.00 3.08
3545 3735 2.544486 GGCTATCCGTACGTGGTTTAGG 60.544 54.545 15.21 0.00 0.00 2.69
3546 3736 2.360165 AGGCTATCCGTACGTGGTTTAG 59.640 50.000 15.21 8.34 37.47 1.85
3547 3737 2.378038 AGGCTATCCGTACGTGGTTTA 58.622 47.619 15.21 0.00 37.47 2.01
3548 3738 1.188863 AGGCTATCCGTACGTGGTTT 58.811 50.000 15.21 0.00 37.47 3.27
3549 3739 1.135721 GAAGGCTATCCGTACGTGGTT 59.864 52.381 15.21 0.00 37.47 3.67
3550 3740 0.743097 GAAGGCTATCCGTACGTGGT 59.257 55.000 15.21 4.64 37.47 4.16
3551 3741 0.031721 GGAAGGCTATCCGTACGTGG 59.968 60.000 15.21 0.00 37.47 4.94
3552 3742 0.742505 TGGAAGGCTATCCGTACGTG 59.257 55.000 15.21 5.96 42.76 4.49
3553 3743 1.700955 ATGGAAGGCTATCCGTACGT 58.299 50.000 15.21 0.00 42.76 3.57
3554 3744 3.079578 TCTATGGAAGGCTATCCGTACG 58.920 50.000 8.69 8.69 42.76 3.67
3555 3745 3.193056 GGTCTATGGAAGGCTATCCGTAC 59.807 52.174 11.33 7.47 42.76 3.67
3556 3746 3.428532 GGTCTATGGAAGGCTATCCGTA 58.571 50.000 13.49 13.49 42.76 4.02
3557 3747 2.249139 GGTCTATGGAAGGCTATCCGT 58.751 52.381 12.84 12.84 42.76 4.69
3558 3748 1.550976 GGGTCTATGGAAGGCTATCCG 59.449 57.143 9.98 0.00 42.76 4.18
3559 3749 2.303311 GTGGGTCTATGGAAGGCTATCC 59.697 54.545 8.30 8.30 40.10 2.59
3560 3750 2.972713 TGTGGGTCTATGGAAGGCTATC 59.027 50.000 0.00 0.00 0.00 2.08
3561 3751 2.706190 GTGTGGGTCTATGGAAGGCTAT 59.294 50.000 0.00 0.00 0.00 2.97
3562 3752 2.116238 GTGTGGGTCTATGGAAGGCTA 58.884 52.381 0.00 0.00 0.00 3.93
3563 3753 0.912486 GTGTGGGTCTATGGAAGGCT 59.088 55.000 0.00 0.00 0.00 4.58
3564 3754 0.912486 AGTGTGGGTCTATGGAAGGC 59.088 55.000 0.00 0.00 0.00 4.35
3565 3755 2.571653 TCAAGTGTGGGTCTATGGAAGG 59.428 50.000 0.00 0.00 0.00 3.46
3566 3756 3.981071 TCAAGTGTGGGTCTATGGAAG 57.019 47.619 0.00 0.00 0.00 3.46
3567 3757 3.244770 GGTTCAAGTGTGGGTCTATGGAA 60.245 47.826 0.00 0.00 0.00 3.53
3568 3758 2.304761 GGTTCAAGTGTGGGTCTATGGA 59.695 50.000 0.00 0.00 0.00 3.41
3569 3759 2.039746 TGGTTCAAGTGTGGGTCTATGG 59.960 50.000 0.00 0.00 0.00 2.74
3570 3760 3.007940 TCTGGTTCAAGTGTGGGTCTATG 59.992 47.826 0.00 0.00 0.00 2.23
3571 3761 3.008049 GTCTGGTTCAAGTGTGGGTCTAT 59.992 47.826 0.00 0.00 0.00 1.98
3572 3762 2.367567 GTCTGGTTCAAGTGTGGGTCTA 59.632 50.000 0.00 0.00 0.00 2.59
3573 3763 1.141053 GTCTGGTTCAAGTGTGGGTCT 59.859 52.381 0.00 0.00 0.00 3.85
3574 3764 1.141053 AGTCTGGTTCAAGTGTGGGTC 59.859 52.381 0.00 0.00 0.00 4.46
3575 3765 1.134098 CAGTCTGGTTCAAGTGTGGGT 60.134 52.381 0.00 0.00 0.00 4.51
3576 3766 1.140852 TCAGTCTGGTTCAAGTGTGGG 59.859 52.381 0.00 0.00 0.00 4.61
3577 3767 2.620251 TCAGTCTGGTTCAAGTGTGG 57.380 50.000 0.00 0.00 0.00 4.17
3578 3768 2.810274 CCATCAGTCTGGTTCAAGTGTG 59.190 50.000 0.00 0.00 0.00 3.82
3579 3769 3.131709 CCATCAGTCTGGTTCAAGTGT 57.868 47.619 0.00 0.00 0.00 3.55
3589 3779 0.177604 GAGGCCTGACCATCAGTCTG 59.822 60.000 12.00 0.00 46.46 3.51
3590 3780 0.042431 AGAGGCCTGACCATCAGTCT 59.958 55.000 12.00 0.00 46.46 3.24
3591 3781 0.908198 AAGAGGCCTGACCATCAGTC 59.092 55.000 12.00 0.00 42.80 3.51
3592 3782 1.366319 AAAGAGGCCTGACCATCAGT 58.634 50.000 12.00 0.00 42.80 3.41
3593 3783 2.503895 AAAAGAGGCCTGACCATCAG 57.496 50.000 12.00 0.00 43.91 2.90
3594 3784 2.978156 AAAAAGAGGCCTGACCATCA 57.022 45.000 12.00 0.00 43.14 3.07
3611 3801 6.701145 TGTACAAGAGGCATACAACAAAAA 57.299 33.333 0.00 0.00 0.00 1.94
3612 3802 6.892658 ATGTACAAGAGGCATACAACAAAA 57.107 33.333 0.00 0.00 32.80 2.44
3613 3803 6.714810 AGAATGTACAAGAGGCATACAACAAA 59.285 34.615 0.00 0.00 32.80 2.83
3614 3804 6.237901 AGAATGTACAAGAGGCATACAACAA 58.762 36.000 0.00 0.00 32.80 2.83
3615 3805 5.804639 AGAATGTACAAGAGGCATACAACA 58.195 37.500 0.00 0.00 32.80 3.33
3616 3806 6.743575 AAGAATGTACAAGAGGCATACAAC 57.256 37.500 0.00 0.00 32.80 3.32
3617 3807 9.109393 GATAAAGAATGTACAAGAGGCATACAA 57.891 33.333 0.00 0.00 32.80 2.41
3618 3808 8.486210 AGATAAAGAATGTACAAGAGGCATACA 58.514 33.333 0.00 0.00 33.54 2.29
3619 3809 8.894768 AGATAAAGAATGTACAAGAGGCATAC 57.105 34.615 0.00 0.00 0.00 2.39
3626 3816 9.678941 CGCACTATAGATAAAGAATGTACAAGA 57.321 33.333 6.78 0.00 0.00 3.02
3627 3817 9.678941 TCGCACTATAGATAAAGAATGTACAAG 57.321 33.333 6.78 0.00 0.00 3.16
3629 3819 9.678941 CTTCGCACTATAGATAAAGAATGTACA 57.321 33.333 6.78 0.00 0.00 2.90
3630 3820 9.130312 CCTTCGCACTATAGATAAAGAATGTAC 57.870 37.037 6.78 0.00 0.00 2.90
3631 3821 7.813148 GCCTTCGCACTATAGATAAAGAATGTA 59.187 37.037 6.78 0.00 34.03 2.29
3632 3822 6.647067 GCCTTCGCACTATAGATAAAGAATGT 59.353 38.462 6.78 0.00 34.03 2.71
3633 3823 6.646653 TGCCTTCGCACTATAGATAAAGAATG 59.353 38.462 6.78 3.70 41.12 2.67
3634 3824 6.759272 TGCCTTCGCACTATAGATAAAGAAT 58.241 36.000 6.78 0.00 41.12 2.40
3635 3825 6.040504 TCTGCCTTCGCACTATAGATAAAGAA 59.959 38.462 6.78 4.18 41.12 2.52
3636 3826 5.535030 TCTGCCTTCGCACTATAGATAAAGA 59.465 40.000 6.78 0.00 41.12 2.52
3637 3827 5.773575 TCTGCCTTCGCACTATAGATAAAG 58.226 41.667 6.78 4.66 41.12 1.85
3638 3828 5.773575 CTCTGCCTTCGCACTATAGATAAA 58.226 41.667 6.78 0.00 41.12 1.40
3639 3829 4.321304 GCTCTGCCTTCGCACTATAGATAA 60.321 45.833 6.78 0.00 41.12 1.75
3640 3830 3.191581 GCTCTGCCTTCGCACTATAGATA 59.808 47.826 6.78 0.00 41.12 1.98
3641 3831 2.029470 GCTCTGCCTTCGCACTATAGAT 60.029 50.000 6.78 0.00 41.12 1.98
3642 3832 1.338337 GCTCTGCCTTCGCACTATAGA 59.662 52.381 6.78 0.00 41.12 1.98
3643 3833 1.777101 GCTCTGCCTTCGCACTATAG 58.223 55.000 0.00 0.00 41.12 1.31
3644 3834 3.967886 GCTCTGCCTTCGCACTATA 57.032 52.632 0.00 0.00 41.12 1.31
3645 3835 4.844420 GCTCTGCCTTCGCACTAT 57.156 55.556 0.00 0.00 41.12 2.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.