Multiple sequence alignment - TraesCS3D01G120400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G120400 chr3D 100.000 3452 0 0 1 3452 75961094 75964545 0.000000e+00 6375.0
1 TraesCS3D01G120400 chr3D 91.766 1433 89 16 1027 2446 75946811 75948227 0.000000e+00 1965.0
2 TraesCS3D01G120400 chr3D 87.413 429 19 18 2913 3317 579532688 579532271 8.730000e-126 460.0
3 TraesCS3D01G120400 chr3A 92.533 2290 92 28 507 2760 90363570 90365816 0.000000e+00 3208.0
4 TraesCS3D01G120400 chr3A 91.795 1426 94 12 1027 2445 90293322 90294731 0.000000e+00 1964.0
5 TraesCS3D01G120400 chr3A 86.861 137 12 5 2837 2969 742348199 742348065 7.720000e-32 148.0
6 TraesCS3D01G120400 chr3B 93.333 2085 92 25 658 2729 123032970 123035020 0.000000e+00 3037.0
7 TraesCS3D01G120400 chr3B 90.413 1429 111 14 1027 2445 122826284 122827696 0.000000e+00 1857.0
8 TraesCS3D01G120400 chr3B 88.000 225 24 2 245 468 123032739 123032961 2.640000e-66 263.0
9 TraesCS3D01G120400 chr3B 80.892 157 23 7 2831 2983 17790395 17790548 2.180000e-22 117.0
10 TraesCS3D01G120400 chr3B 90.909 88 6 2 20 106 270949046 270949132 2.180000e-22 117.0
11 TraesCS3D01G120400 chr6B 85.534 1424 166 22 1042 2445 6213365 6211962 0.000000e+00 1452.0
12 TraesCS3D01G120400 chr6B 78.437 371 65 10 1874 2244 276303167 276302812 9.640000e-56 228.0
13 TraesCS3D01G120400 chr6B 87.500 72 7 2 30 100 202511550 202511480 7.940000e-12 82.4
14 TraesCS3D01G120400 chr6B 86.486 74 9 1 2831 2904 132122271 132122343 2.860000e-11 80.5
15 TraesCS3D01G120400 chr6D 86.353 828 90 12 1601 2413 3038419 3037600 0.000000e+00 881.0
16 TraesCS3D01G120400 chr6D 84.886 569 59 8 1042 1609 3040178 3039636 1.810000e-152 549.0
17 TraesCS3D01G120400 chr6D 88.043 92 11 0 18 109 159983887 159983796 3.640000e-20 110.0
18 TraesCS3D01G120400 chr6D 97.619 42 0 1 66 106 138401475 138401516 1.720000e-08 71.3
19 TraesCS3D01G120400 chr6A 90.778 553 32 9 2913 3446 518604578 518605130 0.000000e+00 721.0
20 TraesCS3D01G120400 chr6A 88.612 562 31 12 2912 3446 600310705 600311260 0.000000e+00 652.0
21 TraesCS3D01G120400 chr6A 95.238 42 2 0 65 106 35922014 35922055 2.220000e-07 67.6
22 TraesCS3D01G120400 chrUn 90.647 556 25 9 2916 3446 132103485 132104038 0.000000e+00 713.0
23 TraesCS3D01G120400 chr4D 90.580 552 31 11 2916 3446 505322837 505323388 0.000000e+00 712.0
24 TraesCS3D01G120400 chr2D 90.433 554 28 10 2916 3446 405397441 405397992 0.000000e+00 706.0
25 TraesCS3D01G120400 chr5D 90.000 550 31 11 2919 3446 345969448 345968901 0.000000e+00 689.0
26 TraesCS3D01G120400 chr5D 74.118 340 68 18 1872 2201 224760891 224760562 4.680000e-24 122.0
27 TraesCS3D01G120400 chr5D 91.667 72 6 0 25 96 113381004 113381075 2.190000e-17 100.0
28 TraesCS3D01G120400 chr5D 84.706 85 13 0 2109 2193 469243336 469243420 6.140000e-13 86.1
29 TraesCS3D01G120400 chr5D 94.444 36 2 0 2138 2173 542107239 542107274 4.810000e-04 56.5
30 TraesCS3D01G120400 chr1D 90.577 520 26 11 2914 3412 320210011 320210528 0.000000e+00 667.0
31 TraesCS3D01G120400 chr1D 72.758 1483 286 87 1045 2445 118510524 118511970 3.230000e-105 392.0
32 TraesCS3D01G120400 chr7D 87.569 547 41 21 2909 3446 13070616 13070088 2.950000e-170 608.0
33 TraesCS3D01G120400 chr7D 87.109 543 42 23 2913 3444 37106360 37106885 1.070000e-164 590.0
34 TraesCS3D01G120400 chr7D 81.185 574 54 28 2910 3449 566126789 566126236 2.480000e-111 412.0
35 TraesCS3D01G120400 chr7D 79.099 555 68 30 2916 3449 16804219 16804746 4.270000e-89 339.0
36 TraesCS3D01G120400 chr7D 85.714 280 24 11 3175 3450 576654719 576654986 7.290000e-72 281.0
37 TraesCS3D01G120400 chr7D 85.560 277 24 11 3175 3447 92714292 92714028 3.390000e-70 276.0
38 TraesCS3D01G120400 chr7D 89.744 117 12 0 2078 2194 454379293 454379409 2.150000e-32 150.0
39 TraesCS3D01G120400 chr2A 84.324 555 39 21 2917 3446 768425566 768426097 1.850000e-137 499.0
40 TraesCS3D01G120400 chr2A 84.585 506 38 19 2961 3446 748901930 748902415 1.880000e-127 466.0
41 TraesCS3D01G120400 chr2A 81.603 549 49 27 2916 3446 55939118 55939632 1.150000e-109 407.0
42 TraesCS3D01G120400 chr2A 85.135 370 28 14 3101 3446 736555134 736554768 1.520000e-93 353.0
43 TraesCS3D01G120400 chr2A 85.714 84 10 2 1423 1505 719205005 719205087 1.710000e-13 87.9
44 TraesCS3D01G120400 chr2A 89.091 55 4 2 2837 2890 754043258 754043205 2.220000e-07 67.6
45 TraesCS3D01G120400 chr1A 73.255 1447 270 87 1045 2410 130149255 130150665 1.480000e-113 420.0
46 TraesCS3D01G120400 chr1B 78.507 335 68 4 2078 2410 180406948 180407280 2.090000e-52 217.0
47 TraesCS3D01G120400 chr7B 87.179 117 15 0 2078 2194 478538244 478538360 2.160000e-27 134.0
48 TraesCS3D01G120400 chr5B 74.412 340 67 16 1872 2201 246952298 246952627 1.010000e-25 128.0
49 TraesCS3D01G120400 chr5B 93.220 59 2 2 2117 2173 576257907 576257965 6.140000e-13 86.1
50 TraesCS3D01G120400 chr5B 89.130 46 3 2 65 109 492785818 492785862 4.810000e-04 56.5
51 TraesCS3D01G120400 chr4B 89.130 92 6 4 20 109 580533820 580533731 1.010000e-20 111.0
52 TraesCS3D01G120400 chr2B 88.506 87 10 0 20 106 458623148 458623234 4.710000e-19 106.0
53 TraesCS3D01G120400 chr2B 88.235 85 10 0 20 104 725613353 725613437 6.100000e-18 102.0
54 TraesCS3D01G120400 chr2B 81.373 102 17 2 1423 1523 705327742 705327642 7.940000e-12 82.4
55 TraesCS3D01G120400 chr2B 84.524 84 11 2 1423 1505 705530493 705530575 7.940000e-12 82.4
56 TraesCS3D01G120400 chr2B 85.185 81 9 2 2836 2916 672651046 672651123 2.860000e-11 80.5
57 TraesCS3D01G120400 chr2B 87.755 49 5 1 2857 2905 523090193 523090146 4.810000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G120400 chr3D 75961094 75964545 3451 False 6375 6375 100.0000 1 3452 1 chr3D.!!$F2 3451
1 TraesCS3D01G120400 chr3D 75946811 75948227 1416 False 1965 1965 91.7660 1027 2446 1 chr3D.!!$F1 1419
2 TraesCS3D01G120400 chr3A 90363570 90365816 2246 False 3208 3208 92.5330 507 2760 1 chr3A.!!$F2 2253
3 TraesCS3D01G120400 chr3A 90293322 90294731 1409 False 1964 1964 91.7950 1027 2445 1 chr3A.!!$F1 1418
4 TraesCS3D01G120400 chr3B 122826284 122827696 1412 False 1857 1857 90.4130 1027 2445 1 chr3B.!!$F2 1418
5 TraesCS3D01G120400 chr3B 123032739 123035020 2281 False 1650 3037 90.6665 245 2729 2 chr3B.!!$F4 2484
6 TraesCS3D01G120400 chr6B 6211962 6213365 1403 True 1452 1452 85.5340 1042 2445 1 chr6B.!!$R1 1403
7 TraesCS3D01G120400 chr6D 3037600 3040178 2578 True 715 881 85.6195 1042 2413 2 chr6D.!!$R2 1371
8 TraesCS3D01G120400 chr6A 518604578 518605130 552 False 721 721 90.7780 2913 3446 1 chr6A.!!$F2 533
9 TraesCS3D01G120400 chr6A 600310705 600311260 555 False 652 652 88.6120 2912 3446 1 chr6A.!!$F3 534
10 TraesCS3D01G120400 chrUn 132103485 132104038 553 False 713 713 90.6470 2916 3446 1 chrUn.!!$F1 530
11 TraesCS3D01G120400 chr4D 505322837 505323388 551 False 712 712 90.5800 2916 3446 1 chr4D.!!$F1 530
12 TraesCS3D01G120400 chr2D 405397441 405397992 551 False 706 706 90.4330 2916 3446 1 chr2D.!!$F1 530
13 TraesCS3D01G120400 chr5D 345968901 345969448 547 True 689 689 90.0000 2919 3446 1 chr5D.!!$R2 527
14 TraesCS3D01G120400 chr1D 320210011 320210528 517 False 667 667 90.5770 2914 3412 1 chr1D.!!$F2 498
15 TraesCS3D01G120400 chr1D 118510524 118511970 1446 False 392 392 72.7580 1045 2445 1 chr1D.!!$F1 1400
16 TraesCS3D01G120400 chr7D 13070088 13070616 528 True 608 608 87.5690 2909 3446 1 chr7D.!!$R1 537
17 TraesCS3D01G120400 chr7D 37106360 37106885 525 False 590 590 87.1090 2913 3444 1 chr7D.!!$F2 531
18 TraesCS3D01G120400 chr7D 566126236 566126789 553 True 412 412 81.1850 2910 3449 1 chr7D.!!$R3 539
19 TraesCS3D01G120400 chr7D 16804219 16804746 527 False 339 339 79.0990 2916 3449 1 chr7D.!!$F1 533
20 TraesCS3D01G120400 chr2A 768425566 768426097 531 False 499 499 84.3240 2917 3446 1 chr2A.!!$F4 529
21 TraesCS3D01G120400 chr2A 55939118 55939632 514 False 407 407 81.6030 2916 3446 1 chr2A.!!$F1 530
22 TraesCS3D01G120400 chr1A 130149255 130150665 1410 False 420 420 73.2550 1045 2410 1 chr1A.!!$F1 1365

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
113 114 0.035739 TTGGGACGGAGGTAGCAAAC 59.964 55.0 0.0 0.0 0.0 2.93 F
494 496 0.108138 GCAACATCGAGCTACCACCT 60.108 55.0 0.0 0.0 0.0 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1828 3118 0.727970 TCGTTGTTGTTGTTGACCGG 59.272 50.0 0.0 0.0 0.00 5.28 R
2487 3850 0.811281 TTCGCTCTCGATCTTGCAGA 59.189 50.0 0.0 0.0 45.04 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.738740 CGTAGCTATAAACAACCTCCTTCG 59.261 45.833 0.00 0.00 0.00 3.79
25 26 4.820894 AGCTATAAACAACCTCCTTCGT 57.179 40.909 0.00 0.00 0.00 3.85
26 27 4.756502 AGCTATAAACAACCTCCTTCGTC 58.243 43.478 0.00 0.00 0.00 4.20
27 28 4.466726 AGCTATAAACAACCTCCTTCGTCT 59.533 41.667 0.00 0.00 0.00 4.18
28 29 4.804665 GCTATAAACAACCTCCTTCGTCTC 59.195 45.833 0.00 0.00 0.00 3.36
29 30 4.884668 ATAAACAACCTCCTTCGTCTCA 57.115 40.909 0.00 0.00 0.00 3.27
30 31 3.553828 AAACAACCTCCTTCGTCTCAA 57.446 42.857 0.00 0.00 0.00 3.02
31 32 3.553828 AACAACCTCCTTCGTCTCAAA 57.446 42.857 0.00 0.00 0.00 2.69
32 33 3.553828 ACAACCTCCTTCGTCTCAAAA 57.446 42.857 0.00 0.00 0.00 2.44
33 34 4.086706 ACAACCTCCTTCGTCTCAAAAT 57.913 40.909 0.00 0.00 0.00 1.82
34 35 5.223449 ACAACCTCCTTCGTCTCAAAATA 57.777 39.130 0.00 0.00 0.00 1.40
35 36 5.617252 ACAACCTCCTTCGTCTCAAAATAA 58.383 37.500 0.00 0.00 0.00 1.40
36 37 5.701290 ACAACCTCCTTCGTCTCAAAATAAG 59.299 40.000 0.00 0.00 0.00 1.73
37 38 5.485209 ACCTCCTTCGTCTCAAAATAAGT 57.515 39.130 0.00 0.00 0.00 2.24
38 39 5.238583 ACCTCCTTCGTCTCAAAATAAGTG 58.761 41.667 0.00 0.00 0.00 3.16
39 40 5.221661 ACCTCCTTCGTCTCAAAATAAGTGT 60.222 40.000 0.00 0.00 0.00 3.55
40 41 5.348997 CCTCCTTCGTCTCAAAATAAGTGTC 59.651 44.000 0.00 0.00 0.00 3.67
41 42 6.097915 TCCTTCGTCTCAAAATAAGTGTCT 57.902 37.500 0.00 0.00 0.00 3.41
42 43 6.157211 TCCTTCGTCTCAAAATAAGTGTCTC 58.843 40.000 0.00 0.00 0.00 3.36
43 44 5.926542 CCTTCGTCTCAAAATAAGTGTCTCA 59.073 40.000 0.00 0.00 0.00 3.27
44 45 6.128795 CCTTCGTCTCAAAATAAGTGTCTCAC 60.129 42.308 0.00 0.00 34.10 3.51
45 46 5.227908 TCGTCTCAAAATAAGTGTCTCACC 58.772 41.667 0.00 0.00 34.49 4.02
46 47 5.010719 TCGTCTCAAAATAAGTGTCTCACCT 59.989 40.000 0.00 0.00 34.49 4.00
47 48 5.696724 CGTCTCAAAATAAGTGTCTCACCTT 59.303 40.000 0.00 0.00 34.49 3.50
48 49 6.202954 CGTCTCAAAATAAGTGTCTCACCTTT 59.797 38.462 0.00 0.00 34.49 3.11
49 50 7.355778 GTCTCAAAATAAGTGTCTCACCTTTG 58.644 38.462 0.00 3.27 34.49 2.77
50 51 7.012421 GTCTCAAAATAAGTGTCTCACCTTTGT 59.988 37.037 0.00 0.00 34.49 2.83
51 52 8.208224 TCTCAAAATAAGTGTCTCACCTTTGTA 58.792 33.333 0.00 0.00 34.49 2.41
52 53 8.149973 TCAAAATAAGTGTCTCACCTTTGTAC 57.850 34.615 0.00 0.00 34.49 2.90
53 54 7.990886 TCAAAATAAGTGTCTCACCTTTGTACT 59.009 33.333 0.00 0.00 34.49 2.73
54 55 9.268268 CAAAATAAGTGTCTCACCTTTGTACTA 57.732 33.333 0.00 0.00 34.49 1.82
55 56 9.841295 AAAATAAGTGTCTCACCTTTGTACTAA 57.159 29.630 0.00 0.00 34.49 2.24
59 60 8.747538 AAGTGTCTCACCTTTGTACTAATTTT 57.252 30.769 0.00 0.00 34.49 1.82
60 61 9.841295 AAGTGTCTCACCTTTGTACTAATTTTA 57.159 29.630 0.00 0.00 34.49 1.52
61 62 9.490379 AGTGTCTCACCTTTGTACTAATTTTAG 57.510 33.333 0.00 0.00 34.49 1.85
62 63 9.269453 GTGTCTCACCTTTGTACTAATTTTAGT 57.731 33.333 8.00 8.00 45.39 2.24
63 64 9.268268 TGTCTCACCTTTGTACTAATTTTAGTG 57.732 33.333 12.20 0.00 43.44 2.74
64 65 9.269453 GTCTCACCTTTGTACTAATTTTAGTGT 57.731 33.333 12.20 0.00 43.44 3.55
99 100 9.362151 ACTAAGTTTGAGACATTTATTTTGGGA 57.638 29.630 0.00 0.00 0.00 4.37
100 101 9.626045 CTAAGTTTGAGACATTTATTTTGGGAC 57.374 33.333 0.00 0.00 0.00 4.46
101 102 6.677913 AGTTTGAGACATTTATTTTGGGACG 58.322 36.000 0.00 0.00 0.00 4.79
102 103 5.637006 TTGAGACATTTATTTTGGGACGG 57.363 39.130 0.00 0.00 0.00 4.79
103 104 4.912586 TGAGACATTTATTTTGGGACGGA 58.087 39.130 0.00 0.00 0.00 4.69
104 105 4.941263 TGAGACATTTATTTTGGGACGGAG 59.059 41.667 0.00 0.00 0.00 4.63
105 106 4.270008 AGACATTTATTTTGGGACGGAGG 58.730 43.478 0.00 0.00 0.00 4.30
106 107 4.014406 GACATTTATTTTGGGACGGAGGT 58.986 43.478 0.00 0.00 0.00 3.85
107 108 5.045432 AGACATTTATTTTGGGACGGAGGTA 60.045 40.000 0.00 0.00 0.00 3.08
108 109 5.190677 ACATTTATTTTGGGACGGAGGTAG 58.809 41.667 0.00 0.00 0.00 3.18
109 110 2.994186 TATTTTGGGACGGAGGTAGC 57.006 50.000 0.00 0.00 0.00 3.58
110 111 0.988832 ATTTTGGGACGGAGGTAGCA 59.011 50.000 0.00 0.00 0.00 3.49
111 112 0.766131 TTTTGGGACGGAGGTAGCAA 59.234 50.000 0.00 0.00 0.00 3.91
112 113 0.766131 TTTGGGACGGAGGTAGCAAA 59.234 50.000 0.00 0.00 0.00 3.68
113 114 0.035739 TTGGGACGGAGGTAGCAAAC 59.964 55.000 0.00 0.00 0.00 2.93
122 123 2.653557 GGTAGCAAACCCAGGGTTG 58.346 57.895 25.70 17.53 46.20 3.77
123 124 0.178973 GGTAGCAAACCCAGGGTTGT 60.179 55.000 25.70 14.71 46.20 3.32
124 125 1.074244 GGTAGCAAACCCAGGGTTGTA 59.926 52.381 25.70 13.69 46.20 2.41
125 126 2.156917 GTAGCAAACCCAGGGTTGTAC 58.843 52.381 25.70 20.58 46.20 2.90
126 127 0.850784 AGCAAACCCAGGGTTGTACT 59.149 50.000 25.70 18.42 46.20 2.73
127 128 1.202891 AGCAAACCCAGGGTTGTACTC 60.203 52.381 25.70 11.77 46.20 2.59
128 129 1.905637 CAAACCCAGGGTTGTACTCC 58.094 55.000 25.70 0.00 46.20 3.85
129 130 0.399075 AAACCCAGGGTTGTACTCCG 59.601 55.000 25.70 0.00 46.20 4.63
130 131 1.486145 AACCCAGGGTTGTACTCCGG 61.486 60.000 24.40 0.00 45.07 5.14
131 132 2.267961 CCAGGGTTGTACTCCGGC 59.732 66.667 0.00 0.00 0.00 6.13
132 133 2.291043 CCAGGGTTGTACTCCGGCT 61.291 63.158 0.00 0.00 0.00 5.52
133 134 1.677552 CAGGGTTGTACTCCGGCTT 59.322 57.895 0.00 0.00 0.00 4.35
134 135 0.391263 CAGGGTTGTACTCCGGCTTC 60.391 60.000 0.00 0.00 0.00 3.86
135 136 1.447314 GGGTTGTACTCCGGCTTCG 60.447 63.158 0.00 0.00 0.00 3.79
136 137 1.588082 GGTTGTACTCCGGCTTCGA 59.412 57.895 0.00 0.00 35.61 3.71
137 138 0.458025 GGTTGTACTCCGGCTTCGAG 60.458 60.000 0.00 0.00 35.61 4.04
138 139 0.524862 GTTGTACTCCGGCTTCGAGA 59.475 55.000 0.00 0.00 35.61 4.04
139 140 0.524862 TTGTACTCCGGCTTCGAGAC 59.475 55.000 0.00 0.00 35.61 3.36
140 141 0.607217 TGTACTCCGGCTTCGAGACA 60.607 55.000 0.00 0.00 35.61 3.41
141 142 0.179169 GTACTCCGGCTTCGAGACAC 60.179 60.000 0.00 0.00 35.61 3.67
142 143 0.607217 TACTCCGGCTTCGAGACACA 60.607 55.000 0.00 0.00 35.61 3.72
143 144 1.289066 CTCCGGCTTCGAGACACAA 59.711 57.895 0.00 0.00 35.61 3.33
144 145 1.006571 TCCGGCTTCGAGACACAAC 60.007 57.895 0.00 0.00 35.61 3.32
145 146 1.300620 CCGGCTTCGAGACACAACA 60.301 57.895 0.00 0.00 35.61 3.33
146 147 0.878523 CCGGCTTCGAGACACAACAA 60.879 55.000 0.00 0.00 35.61 2.83
147 148 1.148310 CGGCTTCGAGACACAACAAT 58.852 50.000 0.00 0.00 35.61 2.71
148 149 1.126846 CGGCTTCGAGACACAACAATC 59.873 52.381 0.00 0.00 35.61 2.67
149 150 2.143122 GGCTTCGAGACACAACAATCA 58.857 47.619 0.00 0.00 0.00 2.57
150 151 2.744202 GGCTTCGAGACACAACAATCAT 59.256 45.455 0.00 0.00 0.00 2.45
151 152 3.189287 GGCTTCGAGACACAACAATCATT 59.811 43.478 0.00 0.00 0.00 2.57
152 153 4.398247 GCTTCGAGACACAACAATCATTC 58.602 43.478 0.00 0.00 0.00 2.67
153 154 4.083855 GCTTCGAGACACAACAATCATTCA 60.084 41.667 0.00 0.00 0.00 2.57
154 155 5.596268 TTCGAGACACAACAATCATTCAG 57.404 39.130 0.00 0.00 0.00 3.02
155 156 3.996363 TCGAGACACAACAATCATTCAGG 59.004 43.478 0.00 0.00 0.00 3.86
156 157 3.125829 CGAGACACAACAATCATTCAGGG 59.874 47.826 0.00 0.00 0.00 4.45
157 158 4.326826 GAGACACAACAATCATTCAGGGA 58.673 43.478 0.00 0.00 0.00 4.20
158 159 4.330250 AGACACAACAATCATTCAGGGAG 58.670 43.478 0.00 0.00 0.00 4.30
159 160 4.042062 AGACACAACAATCATTCAGGGAGA 59.958 41.667 0.00 0.00 0.00 3.71
160 161 4.074970 ACACAACAATCATTCAGGGAGAC 58.925 43.478 0.00 0.00 0.00 3.36
161 162 3.125829 CACAACAATCATTCAGGGAGACG 59.874 47.826 0.00 0.00 0.00 4.18
162 163 3.007940 ACAACAATCATTCAGGGAGACGA 59.992 43.478 0.00 0.00 0.00 4.20
163 164 4.194640 CAACAATCATTCAGGGAGACGAT 58.805 43.478 0.00 0.00 0.00 3.73
164 165 5.104941 ACAACAATCATTCAGGGAGACGATA 60.105 40.000 0.00 0.00 0.00 2.92
165 166 4.950050 ACAATCATTCAGGGAGACGATAC 58.050 43.478 0.00 0.00 0.00 2.24
166 167 4.405680 ACAATCATTCAGGGAGACGATACA 59.594 41.667 0.00 0.00 0.00 2.29
167 168 5.070981 ACAATCATTCAGGGAGACGATACAT 59.929 40.000 0.00 0.00 0.00 2.29
168 169 6.267699 ACAATCATTCAGGGAGACGATACATA 59.732 38.462 0.00 0.00 0.00 2.29
169 170 5.966742 TCATTCAGGGAGACGATACATAG 57.033 43.478 0.00 0.00 0.00 2.23
170 171 5.386060 TCATTCAGGGAGACGATACATAGT 58.614 41.667 0.00 0.00 0.00 2.12
171 172 5.473846 TCATTCAGGGAGACGATACATAGTC 59.526 44.000 0.00 0.00 37.63 2.59
172 173 3.400255 TCAGGGAGACGATACATAGTCG 58.600 50.000 0.00 0.00 44.26 4.18
173 174 2.095668 CAGGGAGACGATACATAGTCGC 60.096 54.545 0.00 0.00 42.56 5.19
174 175 2.615489 GGAGACGATACATAGTCGCC 57.385 55.000 8.90 8.90 46.68 5.54
175 176 1.136029 GGAGACGATACATAGTCGCCG 60.136 57.143 8.90 0.00 44.76 6.46
176 177 0.237761 AGACGATACATAGTCGCCGC 59.762 55.000 0.00 0.00 42.56 6.53
177 178 1.058590 GACGATACATAGTCGCCGCG 61.059 60.000 6.39 6.39 42.56 6.46
178 179 2.426183 CGATACATAGTCGCCGCGC 61.426 63.158 8.21 0.00 31.85 6.86
179 180 1.081376 GATACATAGTCGCCGCGCT 60.081 57.895 8.21 11.17 0.00 5.92
180 181 0.663568 GATACATAGTCGCCGCGCTT 60.664 55.000 8.21 0.69 0.00 4.68
181 182 0.249322 ATACATAGTCGCCGCGCTTT 60.249 50.000 8.21 1.26 0.00 3.51
182 183 0.458889 TACATAGTCGCCGCGCTTTT 60.459 50.000 8.21 0.00 0.00 2.27
183 184 1.296056 ACATAGTCGCCGCGCTTTTT 61.296 50.000 8.21 0.00 0.00 1.94
202 203 4.595762 TTTTTAGACTCGCACTAGGTGT 57.404 40.909 0.00 0.00 35.75 4.16
203 204 3.844577 TTTAGACTCGCACTAGGTGTC 57.155 47.619 0.00 0.00 35.75 3.67
204 205 2.484742 TAGACTCGCACTAGGTGTCA 57.515 50.000 0.00 0.00 35.75 3.58
205 206 1.169577 AGACTCGCACTAGGTGTCAG 58.830 55.000 0.00 0.00 35.75 3.51
206 207 0.456995 GACTCGCACTAGGTGTCAGC 60.457 60.000 0.00 0.00 35.75 4.26
207 208 1.153745 CTCGCACTAGGTGTCAGCC 60.154 63.158 0.00 0.00 35.75 4.85
208 209 2.125512 CGCACTAGGTGTCAGCCC 60.126 66.667 0.00 0.00 35.75 5.19
209 210 2.942796 CGCACTAGGTGTCAGCCCA 61.943 63.158 0.00 0.00 35.75 5.36
210 211 1.604378 GCACTAGGTGTCAGCCCAT 59.396 57.895 0.00 0.00 35.75 4.00
211 212 0.830648 GCACTAGGTGTCAGCCCATA 59.169 55.000 0.00 0.00 35.75 2.74
212 213 1.473434 GCACTAGGTGTCAGCCCATAC 60.473 57.143 0.00 0.00 35.75 2.39
213 214 1.139058 CACTAGGTGTCAGCCCATACC 59.861 57.143 0.00 0.00 0.00 2.73
214 215 0.759346 CTAGGTGTCAGCCCATACCC 59.241 60.000 0.00 0.00 33.67 3.69
215 216 0.693092 TAGGTGTCAGCCCATACCCC 60.693 60.000 0.00 0.00 33.67 4.95
216 217 2.001269 GGTGTCAGCCCATACCCCT 61.001 63.158 0.00 0.00 0.00 4.79
217 218 1.527370 GTGTCAGCCCATACCCCTC 59.473 63.158 0.00 0.00 0.00 4.30
218 219 1.082019 TGTCAGCCCATACCCCTCA 59.918 57.895 0.00 0.00 0.00 3.86
219 220 0.548926 TGTCAGCCCATACCCCTCAA 60.549 55.000 0.00 0.00 0.00 3.02
220 221 0.623723 GTCAGCCCATACCCCTCAAA 59.376 55.000 0.00 0.00 0.00 2.69
221 222 1.005450 GTCAGCCCATACCCCTCAAAA 59.995 52.381 0.00 0.00 0.00 2.44
222 223 1.713647 TCAGCCCATACCCCTCAAAAA 59.286 47.619 0.00 0.00 0.00 1.94
253 254 0.680921 GGCATCAACCCAAGCTGCTA 60.681 55.000 0.90 0.00 33.43 3.49
269 270 1.670295 TGCTACAACAACAGCACACAG 59.330 47.619 0.00 0.00 42.68 3.66
309 310 0.320421 AGACGTACGGTTGCAGCATT 60.320 50.000 21.06 0.00 0.00 3.56
379 380 0.250234 AGCACTGCATCTTCGGCTTA 59.750 50.000 3.30 0.00 0.00 3.09
382 383 1.662629 CACTGCATCTTCGGCTTACTG 59.337 52.381 0.00 0.00 0.00 2.74
383 384 1.276421 ACTGCATCTTCGGCTTACTGT 59.724 47.619 0.00 0.00 0.00 3.55
385 386 0.375106 GCATCTTCGGCTTACTGTGC 59.625 55.000 0.00 0.00 0.00 4.57
386 387 1.725641 CATCTTCGGCTTACTGTGCA 58.274 50.000 0.00 0.00 0.00 4.57
401 402 3.118992 ACTGTGCATGATGAGACATACGT 60.119 43.478 0.00 0.00 0.00 3.57
461 463 0.456312 CCGAGTCCTTACAGCGTGAC 60.456 60.000 0.00 0.00 0.00 3.67
485 487 2.046023 TGCCCCTGCAACATCGAG 60.046 61.111 0.00 0.00 46.66 4.04
486 488 3.512516 GCCCCTGCAACATCGAGC 61.513 66.667 0.00 0.00 37.47 5.03
487 489 2.270205 CCCCTGCAACATCGAGCT 59.730 61.111 0.00 0.00 0.00 4.09
488 490 1.522092 CCCCTGCAACATCGAGCTA 59.478 57.895 0.00 0.00 0.00 3.32
489 491 0.811616 CCCCTGCAACATCGAGCTAC 60.812 60.000 0.00 0.00 0.00 3.58
490 492 0.811616 CCCTGCAACATCGAGCTACC 60.812 60.000 0.00 0.00 0.00 3.18
491 493 0.108186 CCTGCAACATCGAGCTACCA 60.108 55.000 0.00 0.00 0.00 3.25
492 494 1.002366 CTGCAACATCGAGCTACCAC 58.998 55.000 0.00 0.00 0.00 4.16
493 495 0.391130 TGCAACATCGAGCTACCACC 60.391 55.000 0.00 0.00 0.00 4.61
494 496 0.108138 GCAACATCGAGCTACCACCT 60.108 55.000 0.00 0.00 0.00 4.00
495 497 1.645034 CAACATCGAGCTACCACCTG 58.355 55.000 0.00 0.00 0.00 4.00
496 498 0.537188 AACATCGAGCTACCACCTGG 59.463 55.000 0.00 0.00 42.17 4.45
497 499 1.227380 CATCGAGCTACCACCTGGC 60.227 63.158 0.00 0.00 39.32 4.85
498 500 1.381872 ATCGAGCTACCACCTGGCT 60.382 57.895 0.00 0.00 39.32 4.75
499 501 0.978146 ATCGAGCTACCACCTGGCTT 60.978 55.000 0.00 0.00 39.32 4.35
500 502 1.448540 CGAGCTACCACCTGGCTTG 60.449 63.158 0.00 0.00 39.32 4.01
501 503 1.746991 GAGCTACCACCTGGCTTGC 60.747 63.158 0.00 0.00 39.32 4.01
502 504 2.034066 GCTACCACCTGGCTTGCA 59.966 61.111 0.00 0.00 39.32 4.08
503 505 2.042831 GCTACCACCTGGCTTGCAG 61.043 63.158 0.00 0.00 39.32 4.41
504 506 2.034066 TACCACCTGGCTTGCAGC 59.966 61.111 0.00 0.11 41.46 5.25
505 507 3.899981 TACCACCTGGCTTGCAGCG 62.900 63.158 0.00 0.00 43.62 5.18
530 532 3.890756 AGTGAATGTTGATTTGAGCACCA 59.109 39.130 0.00 0.00 0.00 4.17
531 533 3.983344 GTGAATGTTGATTTGAGCACCAC 59.017 43.478 0.00 0.00 0.00 4.16
589 594 0.405585 CCCACACCATCAACCTCCTT 59.594 55.000 0.00 0.00 0.00 3.36
590 595 1.614317 CCCACACCATCAACCTCCTTC 60.614 57.143 0.00 0.00 0.00 3.46
591 596 1.073763 CCACACCATCAACCTCCTTCA 59.926 52.381 0.00 0.00 0.00 3.02
637 643 2.158959 GCCGTGTTGATCCGTCTCG 61.159 63.158 0.00 0.00 0.00 4.04
830 851 1.206132 TGGCTTACATCTGTACCGTGG 59.794 52.381 0.00 0.00 0.00 4.94
859 885 2.598686 GCCCAGGCTTACTACACTAC 57.401 55.000 0.08 0.00 38.26 2.73
860 886 1.829222 GCCCAGGCTTACTACACTACA 59.171 52.381 0.08 0.00 38.26 2.74
861 887 2.418334 GCCCAGGCTTACTACACTACAC 60.418 54.545 0.08 0.00 38.26 2.90
880 906 0.459237 CCTCAGCGCTTTCGTCATCT 60.459 55.000 7.50 0.00 38.14 2.90
881 907 1.354040 CTCAGCGCTTTCGTCATCTT 58.646 50.000 7.50 0.00 38.14 2.40
899 931 2.029649 TCTTCGCCGTATATAACAGGCC 60.030 50.000 15.39 0.00 41.70 5.19
920 952 2.355126 CCCATCGATCACTCGCCG 60.355 66.667 0.00 0.00 44.65 6.46
975 1013 3.162068 CGACAAGACACTCTTACGTAGC 58.838 50.000 0.00 0.00 33.78 3.58
1183 1233 0.516877 CGCTTTCCGCAAGATGTTCA 59.483 50.000 0.00 0.00 39.08 3.18
1257 1310 3.834799 GTGCCCTACTCCGACGGG 61.835 72.222 15.25 7.45 41.06 5.28
1506 1562 1.275573 GCCTACTTCCACTTCTTCCGT 59.724 52.381 0.00 0.00 0.00 4.69
1848 3159 1.332375 CCGGTCAACAACAACAACGAT 59.668 47.619 0.00 0.00 0.00 3.73
2143 3500 4.619227 CGGTGGGGTGCTTCGTGT 62.619 66.667 0.00 0.00 0.00 4.49
2318 3678 4.500116 GGAGACCGACGAGCTGCC 62.500 72.222 0.00 0.00 0.00 4.85
2500 3863 1.329906 GCATGGTTCTGCAAGATCGAG 59.670 52.381 0.00 0.00 46.36 4.04
2534 3897 1.420702 GAGACGAGTGACGAGACGG 59.579 63.158 0.00 0.00 45.77 4.79
2551 3914 1.587054 GGCTCGAGCAGTACTGTGT 59.413 57.895 36.27 11.81 44.36 3.72
2552 3915 0.734253 GGCTCGAGCAGTACTGTGTG 60.734 60.000 36.27 14.78 44.36 3.82
2553 3916 0.039074 GCTCGAGCAGTACTGTGTGT 60.039 55.000 31.91 6.79 41.59 3.72
2554 3917 1.970447 CTCGAGCAGTACTGTGTGTC 58.030 55.000 23.44 13.82 0.00 3.67
2555 3918 1.537638 CTCGAGCAGTACTGTGTGTCT 59.462 52.381 23.44 11.79 0.00 3.41
2556 3919 1.266989 TCGAGCAGTACTGTGTGTCTG 59.733 52.381 23.44 11.42 0.00 3.51
2557 3920 1.001268 CGAGCAGTACTGTGTGTCTGT 60.001 52.381 23.44 0.00 0.00 3.41
2558 3921 2.398498 GAGCAGTACTGTGTGTCTGTG 58.602 52.381 23.44 0.00 0.00 3.66
2566 3929 0.177836 TGTGTGTCTGTGTCCCTGTG 59.822 55.000 0.00 0.00 0.00 3.66
2617 3980 3.398954 TGTTGTTGCGAAAGACTGTTC 57.601 42.857 0.00 0.00 0.00 3.18
2638 4004 8.364129 TGTTCTTTTTATCAAGTTTGGATTGC 57.636 30.769 0.00 0.00 0.00 3.56
2708 4085 1.622811 GGGAGAGATCGAATGCCATCT 59.377 52.381 0.00 0.00 31.70 2.90
2751 4128 0.509929 CAGTGTCAGATGTGTGTGCG 59.490 55.000 0.00 0.00 0.00 5.34
2760 4137 2.432146 AGATGTGTGTGCGTCATAGGAT 59.568 45.455 0.00 0.00 0.00 3.24
2761 4138 2.008752 TGTGTGTGCGTCATAGGATG 57.991 50.000 0.00 0.00 0.00 3.51
2762 4139 1.290203 GTGTGTGCGTCATAGGATGG 58.710 55.000 0.00 0.00 0.00 3.51
2763 4140 0.461870 TGTGTGCGTCATAGGATGGC 60.462 55.000 0.00 0.00 0.00 4.40
2764 4141 0.461870 GTGTGCGTCATAGGATGGCA 60.462 55.000 0.00 0.42 33.60 4.92
2765 4142 0.251634 TGTGCGTCATAGGATGGCAA 59.748 50.000 7.51 0.00 37.17 4.52
2766 4143 1.134128 TGTGCGTCATAGGATGGCAAT 60.134 47.619 7.51 0.00 37.17 3.56
2767 4144 1.949525 GTGCGTCATAGGATGGCAATT 59.050 47.619 7.51 0.00 37.17 2.32
2768 4145 2.031682 GTGCGTCATAGGATGGCAATTC 60.032 50.000 7.51 0.00 37.17 2.17
2769 4146 2.158769 TGCGTCATAGGATGGCAATTCT 60.159 45.455 3.96 0.00 33.97 2.40
2770 4147 2.481952 GCGTCATAGGATGGCAATTCTC 59.518 50.000 0.00 0.00 33.60 2.87
2771 4148 3.805108 GCGTCATAGGATGGCAATTCTCT 60.805 47.826 0.00 0.00 33.60 3.10
2772 4149 3.993081 CGTCATAGGATGGCAATTCTCTC 59.007 47.826 0.00 0.00 33.60 3.20
2773 4150 4.262377 CGTCATAGGATGGCAATTCTCTCT 60.262 45.833 0.00 0.00 33.60 3.10
2774 4151 4.996122 GTCATAGGATGGCAATTCTCTCTG 59.004 45.833 0.00 0.00 34.33 3.35
2775 4152 4.657504 TCATAGGATGGCAATTCTCTCTGT 59.342 41.667 0.00 0.00 0.00 3.41
2776 4153 5.131642 TCATAGGATGGCAATTCTCTCTGTT 59.868 40.000 0.00 0.00 0.00 3.16
2777 4154 6.327365 TCATAGGATGGCAATTCTCTCTGTTA 59.673 38.462 0.00 0.00 0.00 2.41
2778 4155 5.441718 AGGATGGCAATTCTCTCTGTTAA 57.558 39.130 0.00 0.00 0.00 2.01
2779 4156 5.819991 AGGATGGCAATTCTCTCTGTTAAA 58.180 37.500 0.00 0.00 0.00 1.52
2780 4157 6.248433 AGGATGGCAATTCTCTCTGTTAAAA 58.752 36.000 0.00 0.00 0.00 1.52
2781 4158 6.894103 AGGATGGCAATTCTCTCTGTTAAAAT 59.106 34.615 0.00 0.00 0.00 1.82
2782 4159 8.055181 AGGATGGCAATTCTCTCTGTTAAAATA 58.945 33.333 0.00 0.00 0.00 1.40
2783 4160 8.854117 GGATGGCAATTCTCTCTGTTAAAATAT 58.146 33.333 0.00 0.00 0.00 1.28
2809 4186 6.459670 TTTTGTTAGAGAAAAAGGGGTGAC 57.540 37.500 0.00 0.00 0.00 3.67
2810 4187 5.382664 TTGTTAGAGAAAAAGGGGTGACT 57.617 39.130 0.00 0.00 0.00 3.41
2811 4188 4.969484 TGTTAGAGAAAAAGGGGTGACTC 58.031 43.478 0.00 0.00 0.00 3.36
2812 4189 4.410883 TGTTAGAGAAAAAGGGGTGACTCA 59.589 41.667 0.00 0.00 0.00 3.41
2813 4190 5.104277 TGTTAGAGAAAAAGGGGTGACTCAA 60.104 40.000 0.00 0.00 0.00 3.02
2814 4191 3.821748 AGAGAAAAAGGGGTGACTCAAC 58.178 45.455 0.00 0.00 0.00 3.18
2815 4192 3.459969 AGAGAAAAAGGGGTGACTCAACT 59.540 43.478 0.00 0.00 0.00 3.16
2816 4193 4.079730 AGAGAAAAAGGGGTGACTCAACTT 60.080 41.667 0.00 0.00 0.00 2.66
2817 4194 4.610333 AGAAAAAGGGGTGACTCAACTTT 58.390 39.130 0.00 0.00 33.19 2.66
2818 4195 4.402474 AGAAAAAGGGGTGACTCAACTTTG 59.598 41.667 0.00 0.00 32.27 2.77
2819 4196 3.382083 AAAGGGGTGACTCAACTTTGT 57.618 42.857 0.00 0.00 30.86 2.83
2820 4197 4.513406 AAAGGGGTGACTCAACTTTGTA 57.487 40.909 0.00 0.00 30.86 2.41
2821 4198 3.487120 AGGGGTGACTCAACTTTGTAC 57.513 47.619 0.00 0.00 0.00 2.90
2822 4199 2.775384 AGGGGTGACTCAACTTTGTACA 59.225 45.455 0.00 0.00 0.00 2.90
2823 4200 3.201266 AGGGGTGACTCAACTTTGTACAA 59.799 43.478 3.59 3.59 0.00 2.41
2824 4201 3.564225 GGGGTGACTCAACTTTGTACAAG 59.436 47.826 8.56 6.02 0.00 3.16
2825 4202 3.003378 GGGTGACTCAACTTTGTACAAGC 59.997 47.826 8.56 0.00 0.00 4.01
2826 4203 3.877508 GGTGACTCAACTTTGTACAAGCT 59.122 43.478 8.56 0.00 0.00 3.74
2827 4204 4.335594 GGTGACTCAACTTTGTACAAGCTT 59.664 41.667 8.56 0.00 0.00 3.74
2828 4205 5.163652 GGTGACTCAACTTTGTACAAGCTTT 60.164 40.000 8.56 0.84 0.00 3.51
2829 4206 6.037830 GGTGACTCAACTTTGTACAAGCTTTA 59.962 38.462 8.56 0.00 0.00 1.85
2830 4207 7.126398 GTGACTCAACTTTGTACAAGCTTTAG 58.874 38.462 8.56 5.59 0.00 1.85
2831 4208 6.061231 ACTCAACTTTGTACAAGCTTTAGC 57.939 37.500 8.56 0.00 42.49 3.09
2832 4209 5.008712 ACTCAACTTTGTACAAGCTTTAGCC 59.991 40.000 8.56 0.00 43.38 3.93
2833 4210 4.024387 TCAACTTTGTACAAGCTTTAGCCG 60.024 41.667 8.56 0.00 43.38 5.52
2834 4211 3.735591 ACTTTGTACAAGCTTTAGCCGA 58.264 40.909 8.56 0.00 43.38 5.54
2835 4212 4.131596 ACTTTGTACAAGCTTTAGCCGAA 58.868 39.130 8.56 0.00 43.38 4.30
2836 4213 4.577283 ACTTTGTACAAGCTTTAGCCGAAA 59.423 37.500 8.56 0.00 43.38 3.46
2837 4214 5.066764 ACTTTGTACAAGCTTTAGCCGAAAA 59.933 36.000 8.56 0.00 43.38 2.29
2838 4215 5.699097 TTGTACAAGCTTTAGCCGAAAAT 57.301 34.783 3.59 0.00 43.38 1.82
2839 4216 5.699097 TGTACAAGCTTTAGCCGAAAATT 57.301 34.783 0.00 0.00 43.38 1.82
2840 4217 5.695818 TGTACAAGCTTTAGCCGAAAATTC 58.304 37.500 0.00 0.00 43.38 2.17
2841 4218 5.472137 TGTACAAGCTTTAGCCGAAAATTCT 59.528 36.000 0.00 0.00 43.38 2.40
2842 4219 4.798574 ACAAGCTTTAGCCGAAAATTCTG 58.201 39.130 0.00 0.00 43.38 3.02
2843 4220 4.518970 ACAAGCTTTAGCCGAAAATTCTGA 59.481 37.500 0.00 0.00 43.38 3.27
2844 4221 5.009610 ACAAGCTTTAGCCGAAAATTCTGAA 59.990 36.000 0.00 0.00 43.38 3.02
2845 4222 5.705609 AGCTTTAGCCGAAAATTCTGAAA 57.294 34.783 0.00 0.00 43.38 2.69
2846 4223 6.272822 AGCTTTAGCCGAAAATTCTGAAAT 57.727 33.333 0.00 0.00 43.38 2.17
2847 4224 7.391148 AGCTTTAGCCGAAAATTCTGAAATA 57.609 32.000 0.00 0.00 43.38 1.40
2848 4225 7.826690 AGCTTTAGCCGAAAATTCTGAAATAA 58.173 30.769 0.00 0.00 43.38 1.40
2849 4226 8.303876 AGCTTTAGCCGAAAATTCTGAAATAAA 58.696 29.630 0.00 0.00 43.38 1.40
2850 4227 9.087424 GCTTTAGCCGAAAATTCTGAAATAAAT 57.913 29.630 0.00 0.00 34.31 1.40
2852 4229 9.581099 TTTAGCCGAAAATTCTGAAATAAATCC 57.419 29.630 0.00 0.00 0.00 3.01
2853 4230 7.169158 AGCCGAAAATTCTGAAATAAATCCA 57.831 32.000 0.00 0.00 0.00 3.41
2854 4231 7.785033 AGCCGAAAATTCTGAAATAAATCCAT 58.215 30.769 0.00 0.00 0.00 3.41
2855 4232 7.707893 AGCCGAAAATTCTGAAATAAATCCATG 59.292 33.333 0.00 0.00 0.00 3.66
2856 4233 7.706179 GCCGAAAATTCTGAAATAAATCCATGA 59.294 33.333 0.00 0.00 0.00 3.07
2857 4234 9.754382 CCGAAAATTCTGAAATAAATCCATGAT 57.246 29.630 0.00 0.00 0.00 2.45
2864 4241 9.681692 TTCTGAAATAAATCCATGATAAATGCG 57.318 29.630 0.00 0.00 0.00 4.73
2865 4242 9.065798 TCTGAAATAAATCCATGATAAATGCGA 57.934 29.630 0.00 0.00 0.00 5.10
2866 4243 9.338291 CTGAAATAAATCCATGATAAATGCGAG 57.662 33.333 0.00 0.00 0.00 5.03
2867 4244 7.809331 TGAAATAAATCCATGATAAATGCGAGC 59.191 33.333 0.00 0.00 0.00 5.03
2868 4245 6.822667 ATAAATCCATGATAAATGCGAGCA 57.177 33.333 0.00 0.00 0.00 4.26
2869 4246 4.494350 AATCCATGATAAATGCGAGCAC 57.506 40.909 0.00 0.00 0.00 4.40
2870 4247 2.221169 TCCATGATAAATGCGAGCACC 58.779 47.619 0.00 0.00 0.00 5.01
2871 4248 1.948834 CCATGATAAATGCGAGCACCA 59.051 47.619 0.00 0.00 0.00 4.17
2872 4249 2.358582 CCATGATAAATGCGAGCACCAA 59.641 45.455 0.00 0.00 0.00 3.67
2873 4250 3.549423 CCATGATAAATGCGAGCACCAAG 60.549 47.826 0.00 0.00 0.00 3.61
2874 4251 2.984562 TGATAAATGCGAGCACCAAGA 58.015 42.857 0.00 0.00 0.00 3.02
2875 4252 2.677836 TGATAAATGCGAGCACCAAGAC 59.322 45.455 0.00 0.00 0.00 3.01
2876 4253 2.472695 TAAATGCGAGCACCAAGACT 57.527 45.000 0.00 0.00 0.00 3.24
2877 4254 1.609208 AAATGCGAGCACCAAGACTT 58.391 45.000 0.00 0.00 0.00 3.01
2878 4255 0.877071 AATGCGAGCACCAAGACTTG 59.123 50.000 8.31 8.31 0.00 3.16
2879 4256 0.035317 ATGCGAGCACCAAGACTTGA 59.965 50.000 16.99 0.00 0.00 3.02
2880 4257 0.179059 TGCGAGCACCAAGACTTGAA 60.179 50.000 16.99 0.00 0.00 2.69
2881 4258 0.944386 GCGAGCACCAAGACTTGAAA 59.056 50.000 16.99 0.00 0.00 2.69
2882 4259 1.334149 GCGAGCACCAAGACTTGAAAC 60.334 52.381 16.99 5.13 0.00 2.78
2883 4260 1.264288 CGAGCACCAAGACTTGAAACC 59.736 52.381 16.99 2.40 0.00 3.27
2884 4261 1.609072 GAGCACCAAGACTTGAAACCC 59.391 52.381 16.99 0.00 0.00 4.11
2885 4262 1.215423 AGCACCAAGACTTGAAACCCT 59.785 47.619 16.99 2.93 0.00 4.34
2886 4263 1.338020 GCACCAAGACTTGAAACCCTG 59.662 52.381 16.99 0.50 0.00 4.45
2887 4264 1.956477 CACCAAGACTTGAAACCCTGG 59.044 52.381 16.99 0.18 0.00 4.45
2888 4265 1.569072 ACCAAGACTTGAAACCCTGGT 59.431 47.619 16.99 0.87 0.00 4.00
2889 4266 1.956477 CCAAGACTTGAAACCCTGGTG 59.044 52.381 16.99 0.00 0.00 4.17
2890 4267 2.422803 CCAAGACTTGAAACCCTGGTGA 60.423 50.000 16.99 0.00 0.00 4.02
2891 4268 2.880890 CAAGACTTGAAACCCTGGTGAG 59.119 50.000 9.76 0.00 0.00 3.51
2892 4269 1.202818 AGACTTGAAACCCTGGTGAGC 60.203 52.381 0.00 0.00 0.00 4.26
2893 4270 0.846693 ACTTGAAACCCTGGTGAGCT 59.153 50.000 0.00 0.00 0.00 4.09
2894 4271 1.242076 CTTGAAACCCTGGTGAGCTG 58.758 55.000 0.00 0.00 0.00 4.24
2895 4272 0.178992 TTGAAACCCTGGTGAGCTGG 60.179 55.000 0.00 0.09 0.00 4.85
2896 4273 1.303643 GAAACCCTGGTGAGCTGGG 60.304 63.158 22.84 22.84 46.07 4.45
2897 4274 1.774217 AAACCCTGGTGAGCTGGGA 60.774 57.895 29.69 0.00 43.47 4.37
2898 4275 1.142688 AAACCCTGGTGAGCTGGGAT 61.143 55.000 29.69 17.60 43.47 3.85
2899 4276 1.142688 AACCCTGGTGAGCTGGGATT 61.143 55.000 29.69 17.75 43.47 3.01
2900 4277 0.253160 ACCCTGGTGAGCTGGGATTA 60.253 55.000 29.69 0.00 43.47 1.75
2901 4278 0.181350 CCCTGGTGAGCTGGGATTAC 59.819 60.000 20.42 0.00 43.47 1.89
2902 4279 0.181350 CCTGGTGAGCTGGGATTACC 59.819 60.000 0.00 0.00 40.81 2.85
2904 4281 0.618458 TGGTGAGCTGGGATTACCAC 59.382 55.000 0.00 0.00 46.80 4.16
2905 4282 0.912486 GGTGAGCTGGGATTACCACT 59.088 55.000 0.00 0.00 46.80 4.00
2906 4283 2.116238 GGTGAGCTGGGATTACCACTA 58.884 52.381 0.00 0.00 46.80 2.74
2907 4284 2.158943 GGTGAGCTGGGATTACCACTAC 60.159 54.545 0.00 0.00 46.80 2.73
2908 4285 2.116238 TGAGCTGGGATTACCACTACC 58.884 52.381 0.00 0.00 46.80 3.18
2909 4286 1.416772 GAGCTGGGATTACCACTACCC 59.583 57.143 0.00 0.00 46.80 3.69
2910 4287 1.209621 GCTGGGATTACCACTACCCA 58.790 55.000 0.00 0.00 46.80 4.51
3228 4696 4.308458 CTTGACACGGGCGTCCCA 62.308 66.667 14.17 0.00 45.83 4.37
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.056092 AGGAGGTTGTTTATAGCTACGC 57.944 45.455 0.00 0.00 0.00 4.42
2 3 5.658468 ACGAAGGAGGTTGTTTATAGCTAC 58.342 41.667 0.00 0.00 0.00 3.58
3 4 5.655532 AGACGAAGGAGGTTGTTTATAGCTA 59.344 40.000 0.00 0.00 0.00 3.32
5 6 4.756502 AGACGAAGGAGGTTGTTTATAGC 58.243 43.478 0.00 0.00 0.00 2.97
6 7 5.962433 TGAGACGAAGGAGGTTGTTTATAG 58.038 41.667 0.00 0.00 0.00 1.31
7 8 5.988310 TGAGACGAAGGAGGTTGTTTATA 57.012 39.130 0.00 0.00 0.00 0.98
8 9 4.884668 TGAGACGAAGGAGGTTGTTTAT 57.115 40.909 0.00 0.00 0.00 1.40
9 10 4.675976 TTGAGACGAAGGAGGTTGTTTA 57.324 40.909 0.00 0.00 0.00 2.01
10 11 3.553828 TTGAGACGAAGGAGGTTGTTT 57.446 42.857 0.00 0.00 0.00 2.83
11 12 3.553828 TTTGAGACGAAGGAGGTTGTT 57.446 42.857 0.00 0.00 0.00 2.83
12 13 3.553828 TTTTGAGACGAAGGAGGTTGT 57.446 42.857 0.00 0.00 0.00 3.32
13 14 5.701290 ACTTATTTTGAGACGAAGGAGGTTG 59.299 40.000 0.00 0.00 0.00 3.77
14 15 5.701290 CACTTATTTTGAGACGAAGGAGGTT 59.299 40.000 0.00 0.00 0.00 3.50
15 16 5.221661 ACACTTATTTTGAGACGAAGGAGGT 60.222 40.000 0.00 0.00 0.00 3.85
16 17 5.238583 ACACTTATTTTGAGACGAAGGAGG 58.761 41.667 0.00 0.00 0.00 4.30
17 18 6.159988 AGACACTTATTTTGAGACGAAGGAG 58.840 40.000 0.00 0.00 0.00 3.69
18 19 6.097915 AGACACTTATTTTGAGACGAAGGA 57.902 37.500 0.00 0.00 0.00 3.36
19 20 5.926542 TGAGACACTTATTTTGAGACGAAGG 59.073 40.000 0.00 0.00 0.00 3.46
20 21 6.128795 GGTGAGACACTTATTTTGAGACGAAG 60.129 42.308 0.00 0.00 34.40 3.79
21 22 5.694910 GGTGAGACACTTATTTTGAGACGAA 59.305 40.000 0.00 0.00 34.40 3.85
22 23 5.010719 AGGTGAGACACTTATTTTGAGACGA 59.989 40.000 0.00 0.00 34.40 4.20
23 24 5.230942 AGGTGAGACACTTATTTTGAGACG 58.769 41.667 0.00 0.00 34.40 4.18
24 25 7.012421 ACAAAGGTGAGACACTTATTTTGAGAC 59.988 37.037 17.89 0.00 34.40 3.36
25 26 7.054124 ACAAAGGTGAGACACTTATTTTGAGA 58.946 34.615 17.89 0.00 34.40 3.27
26 27 7.264373 ACAAAGGTGAGACACTTATTTTGAG 57.736 36.000 17.89 0.00 34.40 3.02
27 28 7.990886 AGTACAAAGGTGAGACACTTATTTTGA 59.009 33.333 17.89 7.93 34.40 2.69
28 29 8.154649 AGTACAAAGGTGAGACACTTATTTTG 57.845 34.615 0.00 0.51 34.40 2.44
29 30 9.841295 TTAGTACAAAGGTGAGACACTTATTTT 57.159 29.630 0.00 0.00 34.40 1.82
33 34 9.841295 AAAATTAGTACAAAGGTGAGACACTTA 57.159 29.630 0.00 0.00 34.40 2.24
34 35 8.747538 AAAATTAGTACAAAGGTGAGACACTT 57.252 30.769 0.00 0.00 34.40 3.16
35 36 9.490379 CTAAAATTAGTACAAAGGTGAGACACT 57.510 33.333 0.00 0.00 34.40 3.55
36 37 9.269453 ACTAAAATTAGTACAAAGGTGAGACAC 57.731 33.333 4.05 0.00 41.92 3.67
37 38 9.268268 CACTAAAATTAGTACAAAGGTGAGACA 57.732 33.333 5.56 0.00 41.82 3.41
38 39 9.269453 ACACTAAAATTAGTACAAAGGTGAGAC 57.731 33.333 5.56 0.00 41.82 3.36
73 74 9.362151 TCCCAAAATAAATGTCTCAAACTTAGT 57.638 29.630 0.00 0.00 0.00 2.24
74 75 9.626045 GTCCCAAAATAAATGTCTCAAACTTAG 57.374 33.333 0.00 0.00 0.00 2.18
75 76 8.293867 CGTCCCAAAATAAATGTCTCAAACTTA 58.706 33.333 0.00 0.00 0.00 2.24
76 77 7.145323 CGTCCCAAAATAAATGTCTCAAACTT 58.855 34.615 0.00 0.00 0.00 2.66
77 78 6.294508 CCGTCCCAAAATAAATGTCTCAAACT 60.295 38.462 0.00 0.00 0.00 2.66
78 79 5.861787 CCGTCCCAAAATAAATGTCTCAAAC 59.138 40.000 0.00 0.00 0.00 2.93
79 80 5.770663 TCCGTCCCAAAATAAATGTCTCAAA 59.229 36.000 0.00 0.00 0.00 2.69
80 81 5.317808 TCCGTCCCAAAATAAATGTCTCAA 58.682 37.500 0.00 0.00 0.00 3.02
81 82 4.912586 TCCGTCCCAAAATAAATGTCTCA 58.087 39.130 0.00 0.00 0.00 3.27
82 83 4.335594 CCTCCGTCCCAAAATAAATGTCTC 59.664 45.833 0.00 0.00 0.00 3.36
83 84 4.263771 ACCTCCGTCCCAAAATAAATGTCT 60.264 41.667 0.00 0.00 0.00 3.41
84 85 4.014406 ACCTCCGTCCCAAAATAAATGTC 58.986 43.478 0.00 0.00 0.00 3.06
85 86 4.042271 ACCTCCGTCCCAAAATAAATGT 57.958 40.909 0.00 0.00 0.00 2.71
86 87 4.036380 GCTACCTCCGTCCCAAAATAAATG 59.964 45.833 0.00 0.00 0.00 2.32
87 88 4.204799 GCTACCTCCGTCCCAAAATAAAT 58.795 43.478 0.00 0.00 0.00 1.40
88 89 3.009253 TGCTACCTCCGTCCCAAAATAAA 59.991 43.478 0.00 0.00 0.00 1.40
89 90 2.572556 TGCTACCTCCGTCCCAAAATAA 59.427 45.455 0.00 0.00 0.00 1.40
90 91 2.189676 TGCTACCTCCGTCCCAAAATA 58.810 47.619 0.00 0.00 0.00 1.40
91 92 0.988832 TGCTACCTCCGTCCCAAAAT 59.011 50.000 0.00 0.00 0.00 1.82
92 93 0.766131 TTGCTACCTCCGTCCCAAAA 59.234 50.000 0.00 0.00 0.00 2.44
93 94 0.766131 TTTGCTACCTCCGTCCCAAA 59.234 50.000 0.00 0.00 0.00 3.28
94 95 0.035739 GTTTGCTACCTCCGTCCCAA 59.964 55.000 0.00 0.00 0.00 4.12
95 96 1.675219 GTTTGCTACCTCCGTCCCA 59.325 57.895 0.00 0.00 0.00 4.37
96 97 1.078637 GGTTTGCTACCTCCGTCCC 60.079 63.158 1.81 0.00 44.10 4.46
97 98 1.078637 GGGTTTGCTACCTCCGTCC 60.079 63.158 8.22 0.00 46.86 4.79
98 99 0.391263 CTGGGTTTGCTACCTCCGTC 60.391 60.000 8.22 0.00 46.86 4.79
99 100 1.677552 CTGGGTTTGCTACCTCCGT 59.322 57.895 8.22 0.00 46.86 4.69
100 101 1.078426 CCTGGGTTTGCTACCTCCG 60.078 63.158 8.22 0.00 46.86 4.63
101 102 1.303282 CCCTGGGTTTGCTACCTCC 59.697 63.158 3.97 0.00 46.86 4.30
102 103 0.404426 AACCCTGGGTTTGCTACCTC 59.596 55.000 25.42 0.93 44.33 3.85
103 104 0.112412 CAACCCTGGGTTTGCTACCT 59.888 55.000 28.30 2.03 44.33 3.08
104 105 0.178973 ACAACCCTGGGTTTGCTACC 60.179 55.000 28.30 0.43 44.33 3.18
105 106 2.156917 GTACAACCCTGGGTTTGCTAC 58.843 52.381 28.30 21.10 44.33 3.58
106 107 2.039348 GAGTACAACCCTGGGTTTGCTA 59.961 50.000 28.30 14.58 44.33 3.49
107 108 0.850784 AGTACAACCCTGGGTTTGCT 59.149 50.000 28.30 22.23 44.33 3.91
108 109 1.244816 GAGTACAACCCTGGGTTTGC 58.755 55.000 28.30 20.60 44.33 3.68
109 110 1.880646 CGGAGTACAACCCTGGGTTTG 60.881 57.143 28.30 23.23 44.33 2.93
110 111 0.399075 CGGAGTACAACCCTGGGTTT 59.601 55.000 28.30 20.25 44.33 3.27
112 113 1.916777 CCGGAGTACAACCCTGGGT 60.917 63.158 14.05 14.05 37.65 4.51
113 114 2.987125 CCGGAGTACAACCCTGGG 59.013 66.667 12.28 12.28 0.00 4.45
114 115 1.838073 AAGCCGGAGTACAACCCTGG 61.838 60.000 5.05 0.00 0.00 4.45
115 116 0.391263 GAAGCCGGAGTACAACCCTG 60.391 60.000 5.05 0.00 0.00 4.45
116 117 1.885163 CGAAGCCGGAGTACAACCCT 61.885 60.000 5.05 0.00 0.00 4.34
117 118 1.447314 CGAAGCCGGAGTACAACCC 60.447 63.158 5.05 0.00 0.00 4.11
118 119 0.458025 CTCGAAGCCGGAGTACAACC 60.458 60.000 5.05 0.00 36.24 3.77
119 120 0.524862 TCTCGAAGCCGGAGTACAAC 59.475 55.000 5.05 0.00 36.24 3.32
120 121 0.524862 GTCTCGAAGCCGGAGTACAA 59.475 55.000 5.05 0.00 36.24 2.41
121 122 0.607217 TGTCTCGAAGCCGGAGTACA 60.607 55.000 5.05 0.00 36.24 2.90
122 123 0.179169 GTGTCTCGAAGCCGGAGTAC 60.179 60.000 5.05 0.00 36.24 2.73
123 124 0.607217 TGTGTCTCGAAGCCGGAGTA 60.607 55.000 5.05 0.00 36.24 2.59
124 125 1.461091 TTGTGTCTCGAAGCCGGAGT 61.461 55.000 5.05 0.00 36.24 3.85
125 126 1.009389 GTTGTGTCTCGAAGCCGGAG 61.009 60.000 5.05 0.00 36.24 4.63
126 127 1.006571 GTTGTGTCTCGAAGCCGGA 60.007 57.895 5.05 0.00 36.24 5.14
127 128 0.878523 TTGTTGTGTCTCGAAGCCGG 60.879 55.000 0.00 0.00 36.24 6.13
128 129 1.126846 GATTGTTGTGTCTCGAAGCCG 59.873 52.381 0.00 0.00 37.07 5.52
129 130 2.143122 TGATTGTTGTGTCTCGAAGCC 58.857 47.619 0.00 0.00 0.00 4.35
130 131 4.083855 TGAATGATTGTTGTGTCTCGAAGC 60.084 41.667 0.00 0.00 0.00 3.86
131 132 5.390251 CCTGAATGATTGTTGTGTCTCGAAG 60.390 44.000 0.00 0.00 0.00 3.79
132 133 4.452114 CCTGAATGATTGTTGTGTCTCGAA 59.548 41.667 0.00 0.00 0.00 3.71
133 134 3.996363 CCTGAATGATTGTTGTGTCTCGA 59.004 43.478 0.00 0.00 0.00 4.04
134 135 3.125829 CCCTGAATGATTGTTGTGTCTCG 59.874 47.826 0.00 0.00 0.00 4.04
135 136 4.326826 TCCCTGAATGATTGTTGTGTCTC 58.673 43.478 0.00 0.00 0.00 3.36
136 137 4.042062 TCTCCCTGAATGATTGTTGTGTCT 59.958 41.667 0.00 0.00 0.00 3.41
137 138 4.154918 GTCTCCCTGAATGATTGTTGTGTC 59.845 45.833 0.00 0.00 0.00 3.67
138 139 4.074970 GTCTCCCTGAATGATTGTTGTGT 58.925 43.478 0.00 0.00 0.00 3.72
139 140 3.125829 CGTCTCCCTGAATGATTGTTGTG 59.874 47.826 0.00 0.00 0.00 3.33
140 141 3.007940 TCGTCTCCCTGAATGATTGTTGT 59.992 43.478 0.00 0.00 0.00 3.32
141 142 3.599343 TCGTCTCCCTGAATGATTGTTG 58.401 45.455 0.00 0.00 0.00 3.33
142 143 3.981071 TCGTCTCCCTGAATGATTGTT 57.019 42.857 0.00 0.00 0.00 2.83
143 144 4.405680 TGTATCGTCTCCCTGAATGATTGT 59.594 41.667 0.00 0.00 0.00 2.71
144 145 4.948847 TGTATCGTCTCCCTGAATGATTG 58.051 43.478 0.00 0.00 0.00 2.67
145 146 5.815233 ATGTATCGTCTCCCTGAATGATT 57.185 39.130 0.00 0.00 0.00 2.57
146 147 6.013379 ACTATGTATCGTCTCCCTGAATGAT 58.987 40.000 0.00 0.00 0.00 2.45
147 148 5.386060 ACTATGTATCGTCTCCCTGAATGA 58.614 41.667 0.00 0.00 0.00 2.57
148 149 5.617973 CGACTATGTATCGTCTCCCTGAATG 60.618 48.000 0.00 0.00 34.84 2.67
149 150 4.456222 CGACTATGTATCGTCTCCCTGAAT 59.544 45.833 0.00 0.00 34.84 2.57
150 151 3.813724 CGACTATGTATCGTCTCCCTGAA 59.186 47.826 0.00 0.00 34.84 3.02
151 152 3.400255 CGACTATGTATCGTCTCCCTGA 58.600 50.000 0.00 0.00 34.84 3.86
152 153 2.095668 GCGACTATGTATCGTCTCCCTG 60.096 54.545 0.00 0.00 41.68 4.45
153 154 2.152830 GCGACTATGTATCGTCTCCCT 58.847 52.381 0.00 0.00 41.68 4.20
154 155 1.199558 GGCGACTATGTATCGTCTCCC 59.800 57.143 0.00 0.00 40.97 4.30
155 156 1.136029 CGGCGACTATGTATCGTCTCC 60.136 57.143 0.00 0.00 41.98 3.71
156 157 1.725292 GCGGCGACTATGTATCGTCTC 60.725 57.143 12.98 0.00 41.98 3.36
157 158 0.237761 GCGGCGACTATGTATCGTCT 59.762 55.000 12.98 0.00 41.98 4.18
158 159 1.058590 CGCGGCGACTATGTATCGTC 61.059 60.000 19.16 0.00 41.68 4.20
159 160 1.082300 CGCGGCGACTATGTATCGT 60.082 57.895 19.16 0.00 41.68 3.73
160 161 2.426183 GCGCGGCGACTATGTATCG 61.426 63.158 28.54 1.54 42.55 2.92
161 162 0.663568 AAGCGCGGCGACTATGTATC 60.664 55.000 28.54 4.52 0.00 2.24
162 163 0.249322 AAAGCGCGGCGACTATGTAT 60.249 50.000 28.54 4.45 0.00 2.29
163 164 0.458889 AAAAGCGCGGCGACTATGTA 60.459 50.000 28.54 0.00 0.00 2.29
164 165 1.296056 AAAAAGCGCGGCGACTATGT 61.296 50.000 28.54 8.80 0.00 2.29
165 166 1.423845 AAAAAGCGCGGCGACTATG 59.576 52.632 28.54 0.00 0.00 2.23
166 167 3.884900 AAAAAGCGCGGCGACTAT 58.115 50.000 28.54 11.99 0.00 2.12
181 182 4.038282 TGACACCTAGTGCGAGTCTAAAAA 59.962 41.667 0.00 0.00 36.98 1.94
182 183 3.570975 TGACACCTAGTGCGAGTCTAAAA 59.429 43.478 0.00 0.00 36.98 1.52
183 184 3.151554 TGACACCTAGTGCGAGTCTAAA 58.848 45.455 0.00 0.00 36.98 1.85
184 185 2.747989 CTGACACCTAGTGCGAGTCTAA 59.252 50.000 0.00 0.00 36.98 2.10
185 186 2.357075 CTGACACCTAGTGCGAGTCTA 58.643 52.381 0.00 0.00 36.98 2.59
186 187 1.169577 CTGACACCTAGTGCGAGTCT 58.830 55.000 0.00 0.00 36.98 3.24
187 188 0.456995 GCTGACACCTAGTGCGAGTC 60.457 60.000 0.00 0.00 36.98 3.36
188 189 1.587054 GCTGACACCTAGTGCGAGT 59.413 57.895 0.00 0.00 36.98 4.18
189 190 1.153745 GGCTGACACCTAGTGCGAG 60.154 63.158 0.00 0.00 36.98 5.03
190 191 2.646175 GGGCTGACACCTAGTGCGA 61.646 63.158 0.00 0.00 36.98 5.10
191 192 2.125512 GGGCTGACACCTAGTGCG 60.126 66.667 0.00 0.00 36.98 5.34
192 193 0.830648 TATGGGCTGACACCTAGTGC 59.169 55.000 0.00 0.00 36.98 4.40
193 194 1.139058 GGTATGGGCTGACACCTAGTG 59.861 57.143 0.00 0.00 39.75 2.74
194 195 1.497161 GGTATGGGCTGACACCTAGT 58.503 55.000 0.00 0.00 0.00 2.57
195 196 0.759346 GGGTATGGGCTGACACCTAG 59.241 60.000 0.00 0.00 0.00 3.02
196 197 0.693092 GGGGTATGGGCTGACACCTA 60.693 60.000 0.00 0.00 36.11 3.08
197 198 2.001269 GGGGTATGGGCTGACACCT 61.001 63.158 0.00 0.00 36.11 4.00
198 199 1.984288 GAGGGGTATGGGCTGACACC 61.984 65.000 0.00 0.00 39.65 4.16
199 200 1.271840 TGAGGGGTATGGGCTGACAC 61.272 60.000 0.00 0.00 0.00 3.67
200 201 0.548926 TTGAGGGGTATGGGCTGACA 60.549 55.000 0.00 0.00 0.00 3.58
201 202 0.623723 TTTGAGGGGTATGGGCTGAC 59.376 55.000 0.00 0.00 0.00 3.51
202 203 1.377690 TTTTGAGGGGTATGGGCTGA 58.622 50.000 0.00 0.00 0.00 4.26
203 204 2.230130 TTTTTGAGGGGTATGGGCTG 57.770 50.000 0.00 0.00 0.00 4.85
226 227 3.006859 GCTTGGGTTGATGCCTAGTTTTT 59.993 43.478 0.00 0.00 0.00 1.94
227 228 2.562738 GCTTGGGTTGATGCCTAGTTTT 59.437 45.455 0.00 0.00 0.00 2.43
228 229 2.171003 GCTTGGGTTGATGCCTAGTTT 58.829 47.619 0.00 0.00 0.00 2.66
229 230 1.355720 AGCTTGGGTTGATGCCTAGTT 59.644 47.619 0.00 0.00 0.00 2.24
230 231 0.995024 AGCTTGGGTTGATGCCTAGT 59.005 50.000 0.00 0.00 0.00 2.57
231 232 1.386533 CAGCTTGGGTTGATGCCTAG 58.613 55.000 0.00 0.00 0.00 3.02
232 233 0.680921 GCAGCTTGGGTTGATGCCTA 60.681 55.000 0.00 0.00 0.00 3.93
233 234 1.980772 GCAGCTTGGGTTGATGCCT 60.981 57.895 0.00 0.00 0.00 4.75
234 235 0.680921 TAGCAGCTTGGGTTGATGCC 60.681 55.000 0.00 0.00 37.61 4.40
235 236 0.453390 GTAGCAGCTTGGGTTGATGC 59.547 55.000 0.00 0.00 37.15 3.91
236 237 1.825090 TGTAGCAGCTTGGGTTGATG 58.175 50.000 0.00 0.00 0.00 3.07
237 238 2.162681 GTTGTAGCAGCTTGGGTTGAT 58.837 47.619 0.00 0.00 0.00 2.57
238 239 1.133945 TGTTGTAGCAGCTTGGGTTGA 60.134 47.619 0.00 0.00 0.00 3.18
239 240 1.317613 TGTTGTAGCAGCTTGGGTTG 58.682 50.000 0.00 0.00 0.00 3.77
240 241 1.681264 GTTGTTGTAGCAGCTTGGGTT 59.319 47.619 0.00 0.00 0.00 4.11
241 242 1.318576 GTTGTTGTAGCAGCTTGGGT 58.681 50.000 0.00 0.00 0.00 4.51
242 243 1.267806 CTGTTGTTGTAGCAGCTTGGG 59.732 52.381 0.00 0.00 30.67 4.12
243 244 2.693797 CTGTTGTTGTAGCAGCTTGG 57.306 50.000 0.00 0.00 30.67 3.61
253 254 0.171007 GTGCTGTGTGCTGTTGTTGT 59.829 50.000 0.00 0.00 43.37 3.32
286 287 1.007038 TGCAACCGTACGTCTCACC 60.007 57.895 15.21 0.00 0.00 4.02
287 288 1.615107 GCTGCAACCGTACGTCTCAC 61.615 60.000 15.21 0.10 0.00 3.51
373 374 1.596260 CTCATCATGCACAGTAAGCCG 59.404 52.381 0.00 0.00 0.00 5.52
379 380 3.118992 ACGTATGTCTCATCATGCACAGT 60.119 43.478 0.00 0.00 32.26 3.55
382 383 4.581493 CAAACGTATGTCTCATCATGCAC 58.419 43.478 0.00 0.00 32.26 4.57
383 384 3.063861 GCAAACGTATGTCTCATCATGCA 59.936 43.478 0.00 0.00 32.26 3.96
385 386 4.784394 GCTGCAAACGTATGTCTCATCATG 60.784 45.833 0.00 0.00 0.00 3.07
386 387 3.310774 GCTGCAAACGTATGTCTCATCAT 59.689 43.478 0.00 0.00 0.00 2.45
439 440 2.187163 GCTGTAAGGACTCGGGGC 59.813 66.667 0.00 0.00 0.00 5.80
447 448 1.292223 GGCAGTCACGCTGTAAGGA 59.708 57.895 0.00 0.00 46.64 3.36
452 453 4.320456 CAGGGGCAGTCACGCTGT 62.320 66.667 0.00 0.00 46.64 4.40
469 471 2.593468 TAGCTCGATGTTGCAGGGGC 62.593 60.000 0.00 0.00 41.68 5.80
474 476 0.391130 GGTGGTAGCTCGATGTTGCA 60.391 55.000 0.00 0.00 0.00 4.08
475 477 0.108138 AGGTGGTAGCTCGATGTTGC 60.108 55.000 0.00 0.00 0.00 4.17
476 478 1.645034 CAGGTGGTAGCTCGATGTTG 58.355 55.000 0.00 0.00 0.00 3.33
477 479 0.537188 CCAGGTGGTAGCTCGATGTT 59.463 55.000 0.00 0.00 0.00 2.71
478 480 1.961180 GCCAGGTGGTAGCTCGATGT 61.961 60.000 0.00 0.00 37.57 3.06
479 481 1.227380 GCCAGGTGGTAGCTCGATG 60.227 63.158 0.00 0.00 37.57 3.84
480 482 0.978146 AAGCCAGGTGGTAGCTCGAT 60.978 55.000 0.00 0.00 35.30 3.59
481 483 1.609501 AAGCCAGGTGGTAGCTCGA 60.610 57.895 0.00 0.00 35.30 4.04
482 484 1.448540 CAAGCCAGGTGGTAGCTCG 60.449 63.158 0.00 0.00 35.30 5.03
483 485 1.746991 GCAAGCCAGGTGGTAGCTC 60.747 63.158 0.00 0.00 35.30 4.09
484 486 2.352805 GCAAGCCAGGTGGTAGCT 59.647 61.111 0.00 0.00 38.88 3.32
485 487 2.034066 TGCAAGCCAGGTGGTAGC 59.966 61.111 0.00 0.64 37.57 3.58
486 488 4.308526 CTGCAAGCCAGGTGGTAG 57.691 61.111 0.00 0.00 37.93 3.18
497 499 1.081892 ACATTCACTAGCGCTGCAAG 58.918 50.000 22.90 12.68 0.00 4.01
498 500 1.197492 CAACATTCACTAGCGCTGCAA 59.803 47.619 22.90 7.41 0.00 4.08
499 501 0.798159 CAACATTCACTAGCGCTGCA 59.202 50.000 22.90 0.00 0.00 4.41
500 502 1.078709 TCAACATTCACTAGCGCTGC 58.921 50.000 22.90 0.00 0.00 5.25
501 503 4.093514 CAAATCAACATTCACTAGCGCTG 58.906 43.478 22.90 12.81 0.00 5.18
502 504 4.002982 TCAAATCAACATTCACTAGCGCT 58.997 39.130 17.26 17.26 0.00 5.92
503 505 4.337763 CTCAAATCAACATTCACTAGCGC 58.662 43.478 0.00 0.00 0.00 5.92
504 506 4.142838 TGCTCAAATCAACATTCACTAGCG 60.143 41.667 0.00 0.00 0.00 4.26
505 507 5.091431 GTGCTCAAATCAACATTCACTAGC 58.909 41.667 0.00 0.00 0.00 3.42
562 564 2.601367 ATGGTGTGGGTGCAAGGC 60.601 61.111 0.00 0.00 0.00 4.35
846 867 3.731264 CGCTGAGGTGTAGTGTAGTAAGC 60.731 52.174 0.00 0.00 0.00 3.09
857 883 0.388134 GACGAAAGCGCTGAGGTGTA 60.388 55.000 12.58 0.00 42.48 2.90
858 884 1.664965 GACGAAAGCGCTGAGGTGT 60.665 57.895 12.58 5.61 42.48 4.16
859 885 1.016130 ATGACGAAAGCGCTGAGGTG 61.016 55.000 12.58 1.77 42.48 4.00
860 886 0.737715 GATGACGAAAGCGCTGAGGT 60.738 55.000 12.58 9.23 42.48 3.85
861 887 0.459237 AGATGACGAAAGCGCTGAGG 60.459 55.000 12.58 5.35 42.48 3.86
880 906 1.687660 TGGCCTGTTATATACGGCGAA 59.312 47.619 16.62 0.00 43.11 4.70
881 907 1.330234 TGGCCTGTTATATACGGCGA 58.670 50.000 16.62 0.00 43.11 5.54
899 931 1.493950 GCGAGTGATCGATGGGCTTG 61.494 60.000 0.54 3.09 34.64 4.01
906 938 1.878522 GTTGCGGCGAGTGATCGAT 60.879 57.895 12.98 0.00 34.64 3.59
912 944 4.025401 GTTGGGTTGCGGCGAGTG 62.025 66.667 12.98 0.00 0.00 3.51
920 952 2.421314 GTTGCTGGGTTGGGTTGC 59.579 61.111 0.00 0.00 0.00 4.17
975 1013 2.724708 GAGTGCAAGAGCGAGCGTG 61.725 63.158 0.00 0.00 46.23 5.34
1734 3024 1.447217 CACCGCATCAGGCTCCATA 59.553 57.895 0.00 0.00 41.67 2.74
1828 3118 0.727970 TCGTTGTTGTTGTTGACCGG 59.272 50.000 0.00 0.00 0.00 5.28
1848 3159 1.301716 GCCGTCCAGCTTGAACAGA 60.302 57.895 0.00 0.00 0.00 3.41
2487 3850 0.811281 TTCGCTCTCGATCTTGCAGA 59.189 50.000 0.00 0.00 45.04 4.26
2494 3857 1.537638 TCCTGCTATTCGCTCTCGATC 59.462 52.381 0.00 0.00 45.04 3.69
2500 3863 0.663688 TCTCGTCCTGCTATTCGCTC 59.336 55.000 0.00 0.00 40.11 5.03
2534 3897 0.039074 ACACACAGTACTGCTCGAGC 60.039 55.000 30.42 30.42 42.50 5.03
2551 3914 4.718143 TCCACAGGGACACAGACA 57.282 55.556 0.00 0.00 38.64 3.41
2566 3929 0.671781 ACAGCTGCAGTGTCGAATCC 60.672 55.000 15.27 0.00 0.00 3.01
2591 3954 4.384247 CAGTCTTTCGCAACAACAACAAAA 59.616 37.500 0.00 0.00 0.00 2.44
2592 3955 3.917380 CAGTCTTTCGCAACAACAACAAA 59.083 39.130 0.00 0.00 0.00 2.83
2593 3956 3.057876 ACAGTCTTTCGCAACAACAACAA 60.058 39.130 0.00 0.00 0.00 2.83
2594 3957 2.486203 ACAGTCTTTCGCAACAACAACA 59.514 40.909 0.00 0.00 0.00 3.33
2751 4128 4.996122 CAGAGAGAATTGCCATCCTATGAC 59.004 45.833 0.00 0.00 0.00 3.06
2785 4162 6.666113 AGTCACCCCTTTTTCTCTAACAAAAA 59.334 34.615 0.00 0.00 32.93 1.94
2786 4163 6.192044 AGTCACCCCTTTTTCTCTAACAAAA 58.808 36.000 0.00 0.00 0.00 2.44
2787 4164 5.762279 AGTCACCCCTTTTTCTCTAACAAA 58.238 37.500 0.00 0.00 0.00 2.83
2788 4165 5.104277 TGAGTCACCCCTTTTTCTCTAACAA 60.104 40.000 0.00 0.00 0.00 2.83
2789 4166 4.410883 TGAGTCACCCCTTTTTCTCTAACA 59.589 41.667 0.00 0.00 0.00 2.41
2790 4167 4.969484 TGAGTCACCCCTTTTTCTCTAAC 58.031 43.478 0.00 0.00 0.00 2.34
2791 4168 5.132144 AGTTGAGTCACCCCTTTTTCTCTAA 59.868 40.000 0.00 0.00 0.00 2.10
2792 4169 4.658901 AGTTGAGTCACCCCTTTTTCTCTA 59.341 41.667 0.00 0.00 0.00 2.43
2793 4170 3.459969 AGTTGAGTCACCCCTTTTTCTCT 59.540 43.478 0.00 0.00 0.00 3.10
2794 4171 3.821748 AGTTGAGTCACCCCTTTTTCTC 58.178 45.455 0.00 0.00 0.00 2.87
2795 4172 3.953542 AGTTGAGTCACCCCTTTTTCT 57.046 42.857 0.00 0.00 0.00 2.52
2796 4173 4.159693 ACAAAGTTGAGTCACCCCTTTTTC 59.840 41.667 8.27 0.00 0.00 2.29
2797 4174 4.093743 ACAAAGTTGAGTCACCCCTTTTT 58.906 39.130 8.27 2.09 0.00 1.94
2798 4175 3.708451 ACAAAGTTGAGTCACCCCTTTT 58.292 40.909 8.27 0.00 0.00 2.27
2799 4176 3.382083 ACAAAGTTGAGTCACCCCTTT 57.618 42.857 0.00 0.00 0.00 3.11
2800 4177 3.201266 TGTACAAAGTTGAGTCACCCCTT 59.799 43.478 0.00 0.00 0.00 3.95
2801 4178 2.775384 TGTACAAAGTTGAGTCACCCCT 59.225 45.455 0.00 0.00 0.00 4.79
2802 4179 3.202829 TGTACAAAGTTGAGTCACCCC 57.797 47.619 0.00 0.00 0.00 4.95
2803 4180 3.003378 GCTTGTACAAAGTTGAGTCACCC 59.997 47.826 10.03 0.00 0.00 4.61
2804 4181 3.877508 AGCTTGTACAAAGTTGAGTCACC 59.122 43.478 10.03 0.00 0.00 4.02
2805 4182 5.485662 AAGCTTGTACAAAGTTGAGTCAC 57.514 39.130 10.03 0.00 0.00 3.67
2806 4183 6.238374 GCTAAAGCTTGTACAAAGTTGAGTCA 60.238 38.462 10.03 0.00 38.21 3.41
2807 4184 6.136743 GCTAAAGCTTGTACAAAGTTGAGTC 58.863 40.000 10.03 2.39 38.21 3.36
2808 4185 5.008712 GGCTAAAGCTTGTACAAAGTTGAGT 59.991 40.000 10.03 0.00 41.70 3.41
2809 4186 5.452777 GGCTAAAGCTTGTACAAAGTTGAG 58.547 41.667 10.03 9.20 41.70 3.02
2810 4187 4.024387 CGGCTAAAGCTTGTACAAAGTTGA 60.024 41.667 10.03 0.00 41.70 3.18
2811 4188 4.024387 TCGGCTAAAGCTTGTACAAAGTTG 60.024 41.667 10.03 0.00 41.70 3.16
2812 4189 4.131596 TCGGCTAAAGCTTGTACAAAGTT 58.868 39.130 10.03 6.54 41.70 2.66
2813 4190 3.735591 TCGGCTAAAGCTTGTACAAAGT 58.264 40.909 10.03 0.00 41.70 2.66
2814 4191 4.742438 TTCGGCTAAAGCTTGTACAAAG 57.258 40.909 10.03 4.86 41.70 2.77
2815 4192 5.502153 TTTTCGGCTAAAGCTTGTACAAA 57.498 34.783 10.03 0.00 41.70 2.83
2816 4193 5.699097 ATTTTCGGCTAAAGCTTGTACAA 57.301 34.783 8.28 8.28 41.70 2.41
2817 4194 5.472137 AGAATTTTCGGCTAAAGCTTGTACA 59.528 36.000 0.00 0.00 41.70 2.90
2818 4195 5.795441 CAGAATTTTCGGCTAAAGCTTGTAC 59.205 40.000 0.00 0.00 41.70 2.90
2819 4196 5.703592 TCAGAATTTTCGGCTAAAGCTTGTA 59.296 36.000 0.00 0.00 41.70 2.41
2820 4197 4.518970 TCAGAATTTTCGGCTAAAGCTTGT 59.481 37.500 0.00 0.00 41.70 3.16
2821 4198 5.046910 TCAGAATTTTCGGCTAAAGCTTG 57.953 39.130 0.00 0.00 41.70 4.01
2822 4199 5.705609 TTCAGAATTTTCGGCTAAAGCTT 57.294 34.783 0.00 0.00 41.70 3.74
2823 4200 5.705609 TTTCAGAATTTTCGGCTAAAGCT 57.294 34.783 1.39 0.00 41.70 3.74
2824 4201 8.460831 TTTATTTCAGAATTTTCGGCTAAAGC 57.539 30.769 0.00 0.00 41.14 3.51
2826 4203 9.581099 GGATTTATTTCAGAATTTTCGGCTAAA 57.419 29.630 0.00 0.00 0.00 1.85
2827 4204 8.744652 TGGATTTATTTCAGAATTTTCGGCTAA 58.255 29.630 0.00 0.00 0.00 3.09
2828 4205 8.287439 TGGATTTATTTCAGAATTTTCGGCTA 57.713 30.769 0.00 0.00 0.00 3.93
2829 4206 7.169158 TGGATTTATTTCAGAATTTTCGGCT 57.831 32.000 0.00 0.00 0.00 5.52
2830 4207 7.706179 TCATGGATTTATTTCAGAATTTTCGGC 59.294 33.333 0.00 0.00 0.00 5.54
2831 4208 9.754382 ATCATGGATTTATTTCAGAATTTTCGG 57.246 29.630 0.00 0.00 0.00 4.30
2838 4215 9.681692 CGCATTTATCATGGATTTATTTCAGAA 57.318 29.630 0.00 0.00 0.00 3.02
2839 4216 9.065798 TCGCATTTATCATGGATTTATTTCAGA 57.934 29.630 0.00 0.00 0.00 3.27
2840 4217 9.338291 CTCGCATTTATCATGGATTTATTTCAG 57.662 33.333 0.00 0.00 0.00 3.02
2841 4218 7.809331 GCTCGCATTTATCATGGATTTATTTCA 59.191 33.333 0.00 0.00 0.00 2.69
2842 4219 7.809331 TGCTCGCATTTATCATGGATTTATTTC 59.191 33.333 0.00 0.00 0.00 2.17
2843 4220 7.596248 GTGCTCGCATTTATCATGGATTTATTT 59.404 33.333 0.00 0.00 0.00 1.40
2844 4221 7.086376 GTGCTCGCATTTATCATGGATTTATT 58.914 34.615 0.00 0.00 0.00 1.40
2845 4222 6.349611 GGTGCTCGCATTTATCATGGATTTAT 60.350 38.462 0.00 0.00 0.00 1.40
2846 4223 5.048782 GGTGCTCGCATTTATCATGGATTTA 60.049 40.000 0.00 0.00 0.00 1.40
2847 4224 4.261741 GGTGCTCGCATTTATCATGGATTT 60.262 41.667 0.00 0.00 0.00 2.17
2848 4225 3.254166 GGTGCTCGCATTTATCATGGATT 59.746 43.478 0.00 0.00 0.00 3.01
2849 4226 2.816087 GGTGCTCGCATTTATCATGGAT 59.184 45.455 0.00 0.00 0.00 3.41
2850 4227 2.221169 GGTGCTCGCATTTATCATGGA 58.779 47.619 0.00 0.00 0.00 3.41
2851 4228 1.948834 TGGTGCTCGCATTTATCATGG 59.051 47.619 0.00 0.00 0.00 3.66
2852 4229 3.313249 TCTTGGTGCTCGCATTTATCATG 59.687 43.478 0.00 0.00 0.00 3.07
2853 4230 3.313526 GTCTTGGTGCTCGCATTTATCAT 59.686 43.478 0.00 0.00 0.00 2.45
2854 4231 2.677836 GTCTTGGTGCTCGCATTTATCA 59.322 45.455 0.00 0.00 0.00 2.15
2855 4232 2.939103 AGTCTTGGTGCTCGCATTTATC 59.061 45.455 0.00 0.00 0.00 1.75
2856 4233 2.991250 AGTCTTGGTGCTCGCATTTAT 58.009 42.857 0.00 0.00 0.00 1.40
2857 4234 2.472695 AGTCTTGGTGCTCGCATTTA 57.527 45.000 0.00 0.00 0.00 1.40
2858 4235 1.267806 CAAGTCTTGGTGCTCGCATTT 59.732 47.619 4.52 0.00 0.00 2.32
2859 4236 0.877071 CAAGTCTTGGTGCTCGCATT 59.123 50.000 4.52 0.00 0.00 3.56
2860 4237 0.035317 TCAAGTCTTGGTGCTCGCAT 59.965 50.000 12.66 0.00 0.00 4.73
2861 4238 0.179059 TTCAAGTCTTGGTGCTCGCA 60.179 50.000 12.66 0.00 0.00 5.10
2862 4239 0.944386 TTTCAAGTCTTGGTGCTCGC 59.056 50.000 12.66 0.00 0.00 5.03
2863 4240 1.264288 GGTTTCAAGTCTTGGTGCTCG 59.736 52.381 12.66 0.00 0.00 5.03
2864 4241 1.609072 GGGTTTCAAGTCTTGGTGCTC 59.391 52.381 12.66 0.00 0.00 4.26
2865 4242 1.215423 AGGGTTTCAAGTCTTGGTGCT 59.785 47.619 12.66 0.00 0.00 4.40
2866 4243 1.338020 CAGGGTTTCAAGTCTTGGTGC 59.662 52.381 12.66 3.25 0.00 5.01
2867 4244 1.956477 CCAGGGTTTCAAGTCTTGGTG 59.044 52.381 12.66 1.96 0.00 4.17
2868 4245 1.569072 ACCAGGGTTTCAAGTCTTGGT 59.431 47.619 12.66 0.00 0.00 3.67
2869 4246 1.956477 CACCAGGGTTTCAAGTCTTGG 59.044 52.381 12.66 0.00 0.00 3.61
2870 4247 2.880890 CTCACCAGGGTTTCAAGTCTTG 59.119 50.000 6.21 6.21 0.00 3.02
2871 4248 2.749800 GCTCACCAGGGTTTCAAGTCTT 60.750 50.000 0.00 0.00 0.00 3.01
2872 4249 1.202818 GCTCACCAGGGTTTCAAGTCT 60.203 52.381 0.00 0.00 0.00 3.24
2873 4250 1.202818 AGCTCACCAGGGTTTCAAGTC 60.203 52.381 0.00 0.00 0.00 3.01
2874 4251 0.846693 AGCTCACCAGGGTTTCAAGT 59.153 50.000 0.00 0.00 0.00 3.16
2875 4252 1.242076 CAGCTCACCAGGGTTTCAAG 58.758 55.000 0.00 0.00 0.00 3.02
2876 4253 0.178992 CCAGCTCACCAGGGTTTCAA 60.179 55.000 0.00 0.00 0.00 2.69
2877 4254 1.455849 CCAGCTCACCAGGGTTTCA 59.544 57.895 0.00 0.00 0.00 2.69
2878 4255 1.303643 CCCAGCTCACCAGGGTTTC 60.304 63.158 0.00 0.00 37.81 2.78
2879 4256 1.142688 ATCCCAGCTCACCAGGGTTT 61.143 55.000 5.99 0.00 43.31 3.27
2880 4257 1.142688 AATCCCAGCTCACCAGGGTT 61.143 55.000 5.99 0.00 43.31 4.11
2881 4258 0.253160 TAATCCCAGCTCACCAGGGT 60.253 55.000 5.99 0.00 43.31 4.34
2882 4259 0.181350 GTAATCCCAGCTCACCAGGG 59.819 60.000 0.00 0.00 44.22 4.45
2883 4260 0.181350 GGTAATCCCAGCTCACCAGG 59.819 60.000 0.00 0.00 0.00 4.45
2884 4261 0.911769 TGGTAATCCCAGCTCACCAG 59.088 55.000 0.00 0.00 38.72 4.00
2885 4262 0.618458 GTGGTAATCCCAGCTCACCA 59.382 55.000 0.00 0.00 46.45 4.17
2886 4263 0.912486 AGTGGTAATCCCAGCTCACC 59.088 55.000 0.00 0.00 46.45 4.02
2887 4264 2.158943 GGTAGTGGTAATCCCAGCTCAC 60.159 54.545 0.00 0.00 46.45 3.51
2888 4265 2.116238 GGTAGTGGTAATCCCAGCTCA 58.884 52.381 0.00 0.00 46.45 4.26
2889 4266 1.416772 GGGTAGTGGTAATCCCAGCTC 59.583 57.143 0.00 0.00 46.45 4.09
2890 4267 1.274184 TGGGTAGTGGTAATCCCAGCT 60.274 52.381 0.00 0.00 46.45 4.24
2891 4268 1.209621 TGGGTAGTGGTAATCCCAGC 58.790 55.000 0.00 0.00 46.45 4.85
2893 4270 1.081513 AGGTGGGTAGTGGTAATCCCA 59.918 52.381 0.00 0.00 46.34 4.37
2894 4271 1.889174 AGGTGGGTAGTGGTAATCCC 58.111 55.000 0.00 0.00 40.26 3.85
2895 4272 4.292643 TCTTAGGTGGGTAGTGGTAATCC 58.707 47.826 0.00 0.00 0.00 3.01
2896 4273 4.202233 GCTCTTAGGTGGGTAGTGGTAATC 60.202 50.000 0.00 0.00 0.00 1.75
2897 4274 3.710165 GCTCTTAGGTGGGTAGTGGTAAT 59.290 47.826 0.00 0.00 0.00 1.89
2898 4275 3.102204 GCTCTTAGGTGGGTAGTGGTAA 58.898 50.000 0.00 0.00 0.00 2.85
2899 4276 2.043389 TGCTCTTAGGTGGGTAGTGGTA 59.957 50.000 0.00 0.00 0.00 3.25
2900 4277 1.203262 TGCTCTTAGGTGGGTAGTGGT 60.203 52.381 0.00 0.00 0.00 4.16
2901 4278 1.568504 TGCTCTTAGGTGGGTAGTGG 58.431 55.000 0.00 0.00 0.00 4.00
2902 4279 3.034635 AGATGCTCTTAGGTGGGTAGTG 58.965 50.000 0.00 0.00 0.00 2.74
2903 4280 3.301274 GAGATGCTCTTAGGTGGGTAGT 58.699 50.000 0.00 0.00 0.00 2.73
2904 4281 2.630580 GGAGATGCTCTTAGGTGGGTAG 59.369 54.545 0.00 0.00 0.00 3.18
2905 4282 2.023404 TGGAGATGCTCTTAGGTGGGTA 60.023 50.000 0.00 0.00 0.00 3.69
2906 4283 1.273838 TGGAGATGCTCTTAGGTGGGT 60.274 52.381 0.00 0.00 0.00 4.51
2907 4284 1.415659 CTGGAGATGCTCTTAGGTGGG 59.584 57.143 0.00 0.00 0.00 4.61
2908 4285 1.202627 GCTGGAGATGCTCTTAGGTGG 60.203 57.143 0.00 0.00 0.00 4.61
2909 4286 1.202627 GGCTGGAGATGCTCTTAGGTG 60.203 57.143 0.00 0.00 0.00 4.00
2910 4287 1.127343 GGCTGGAGATGCTCTTAGGT 58.873 55.000 0.00 0.00 0.00 3.08
2940 4318 3.949047 GCGATTTTAGGCGCCCCG 61.949 66.667 26.15 17.57 46.93 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.