Multiple sequence alignment - TraesCS3D01G120000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G120000 chr3D 100.000 7861 0 0 1 7861 75732947 75740807 0.000000e+00 14517.0
1 TraesCS3D01G120000 chr3D 96.100 1282 44 4 2162 3440 362878229 362876951 0.000000e+00 2085.0
2 TraesCS3D01G120000 chr3D 95.541 157 7 0 2002 2158 594961755 594961599 1.310000e-62 252.0
3 TraesCS3D01G120000 chr3D 96.667 150 5 0 2011 2160 378246599 378246748 4.710000e-62 250.0
4 TraesCS3D01G120000 chr3D 89.706 68 7 0 7600 7667 591356308 591356375 3.910000e-13 87.9
5 TraesCS3D01G120000 chr3D 91.489 47 2 2 7541 7585 68044420 68044466 6.590000e-06 63.9
6 TraesCS3D01G120000 chr3D 96.875 32 1 0 3447 3478 594961597 594961566 4.000000e-03 54.7
7 TraesCS3D01G120000 chr3A 89.908 3696 210 72 4115 7746 90280453 90284049 0.000000e+00 4608.0
8 TraesCS3D01G120000 chr3A 86.648 1056 58 27 529 1549 90277926 90278933 0.000000e+00 1092.0
9 TraesCS3D01G120000 chr3A 88.531 497 22 13 3640 4111 90279881 90280367 3.180000e-158 569.0
10 TraesCS3D01G120000 chr3A 88.669 353 19 7 1 341 90277462 90277805 2.040000e-110 411.0
11 TraesCS3D01G120000 chr3A 79.297 256 24 16 1709 1959 90279116 90279347 1.370000e-32 152.0
12 TraesCS3D01G120000 chr3A 89.474 76 7 1 7603 7678 51573133 51573059 2.340000e-15 95.3
13 TraesCS3D01G120000 chr3A 90.909 66 6 0 7600 7665 169083274 169083339 1.090000e-13 89.8
14 TraesCS3D01G120000 chr3B 88.282 3055 225 75 3642 6618 122574630 122577629 0.000000e+00 3535.0
15 TraesCS3D01G120000 chr3B 84.681 1632 126 73 414 2011 122572762 122574303 0.000000e+00 1515.0
16 TraesCS3D01G120000 chr3B 94.415 752 29 9 6543 7288 122577674 122578418 0.000000e+00 1144.0
17 TraesCS3D01G120000 chr3B 88.083 579 60 8 7284 7856 122580810 122581385 0.000000e+00 678.0
18 TraesCS3D01G120000 chr3B 85.794 359 24 9 1 341 122572391 122572740 9.700000e-94 355.0
19 TraesCS3D01G120000 chr3B 92.308 65 5 0 7599 7663 81809295 81809359 8.400000e-15 93.5
20 TraesCS3D01G120000 chr5D 97.020 1275 34 3 2160 3431 441124460 441123187 0.000000e+00 2141.0
21 TraesCS3D01G120000 chr5D 93.750 160 9 1 2002 2160 539072638 539072797 1.020000e-58 239.0
22 TraesCS3D01G120000 chr5D 89.706 68 7 0 7600 7667 433196785 433196852 3.910000e-13 87.9
23 TraesCS3D01G120000 chr5D 89.855 69 6 1 7600 7667 509562785 509562853 3.910000e-13 87.9
24 TraesCS3D01G120000 chr5D 100.000 29 0 0 3445 3473 218937326 218937298 4.000000e-03 54.7
25 TraesCS3D01G120000 chr5D 100.000 29 0 0 3445 3473 380079466 380079438 4.000000e-03 54.7
26 TraesCS3D01G120000 chr1D 96.659 1287 37 3 2159 3442 480621700 480620417 0.000000e+00 2134.0
27 TraesCS3D01G120000 chr1D 96.576 1285 39 4 2163 3443 216319648 216318365 0.000000e+00 2124.0
28 TraesCS3D01G120000 chr1D 96.479 1278 41 3 2162 3436 61948850 61950126 0.000000e+00 2108.0
29 TraesCS3D01G120000 chr1D 96.617 1271 40 2 2163 3430 467781936 467783206 0.000000e+00 2106.0
30 TraesCS3D01G120000 chr1D 95.000 160 6 2 2002 2160 297155795 297155953 4.710000e-62 250.0
31 TraesCS3D01G120000 chr1D 89.706 68 7 0 7600 7667 102828800 102828867 3.910000e-13 87.9
32 TraesCS3D01G120000 chr1D 88.571 70 7 1 7605 7673 341232716 341232647 5.050000e-12 84.2
33 TraesCS3D01G120000 chr1D 90.476 63 6 0 7602 7664 462095479 462095541 5.050000e-12 84.2
34 TraesCS3D01G120000 chr1D 89.231 65 7 0 7603 7667 338858527 338858463 1.820000e-11 82.4
35 TraesCS3D01G120000 chr1D 97.059 34 0 1 3445 3478 297155951 297155983 1.000000e-03 56.5
36 TraesCS3D01G120000 chr1D 90.476 42 3 1 7541 7581 248926669 248926628 4.000000e-03 54.7
37 TraesCS3D01G120000 chr7D 96.342 1285 44 2 2161 3442 162016989 162015705 0.000000e+00 2109.0
38 TraesCS3D01G120000 chr7D 96.172 1280 45 3 2160 3436 66101860 66103138 0.000000e+00 2089.0
39 TraesCS3D01G120000 chr7D 90.769 65 6 0 7600 7664 28407923 28407987 3.910000e-13 87.9
40 TraesCS3D01G120000 chr7D 89.706 68 7 0 7600 7667 104668420 104668487 3.910000e-13 87.9
41 TraesCS3D01G120000 chr4D 96.696 1271 37 4 2161 3428 484764399 484763131 0.000000e+00 2109.0
42 TraesCS3D01G120000 chr4D 96.667 150 5 0 2011 2160 374834181 374834032 4.710000e-62 250.0
43 TraesCS3D01G120000 chr4D 96.000 150 5 1 2011 2160 472412060 472411912 7.880000e-60 243.0
44 TraesCS3D01G120000 chr4D 100.000 28 0 0 7541 7568 487453268 487453295 1.400000e-02 52.8
45 TraesCS3D01G120000 chr6D 97.333 150 4 0 2011 2160 447736849 447736998 1.010000e-63 255.0
46 TraesCS3D01G120000 chr6D 97.333 150 4 0 2011 2160 470664640 470664491 1.010000e-63 255.0
47 TraesCS3D01G120000 chr6D 86.957 69 9 0 7599 7667 4175741 4175673 2.350000e-10 78.7
48 TraesCS3D01G120000 chr6D 87.037 54 4 3 7531 7583 317015475 317015526 3.060000e-04 58.4
49 TraesCS3D01G120000 chr6D 92.857 42 0 3 7541 7582 450269272 450269234 3.060000e-04 58.4
50 TraesCS3D01G120000 chr5B 94.340 159 8 1 2003 2160 313350948 313351106 7.880000e-60 243.0
51 TraesCS3D01G120000 chr5B 90.909 55 1 3 7533 7584 706370822 706370875 3.940000e-08 71.3
52 TraesCS3D01G120000 chr7A 92.188 64 5 0 7604 7667 144659025 144658962 3.020000e-14 91.6
53 TraesCS3D01G120000 chr7A 85.965 57 7 1 7533 7589 83366145 83366090 8.520000e-05 60.2
54 TraesCS3D01G120000 chr7A 84.615 65 5 5 7522 7584 678931537 678931476 8.520000e-05 60.2
55 TraesCS3D01G120000 chr6A 90.769 65 6 0 7600 7664 401202732 401202796 3.910000e-13 87.9
56 TraesCS3D01G120000 chr6A 85.714 84 8 4 7600 7683 55034099 55034020 1.410000e-12 86.1
57 TraesCS3D01G120000 chr6A 86.154 65 9 0 7603 7667 45770322 45770258 3.940000e-08 71.3
58 TraesCS3D01G120000 chr6A 86.538 52 7 0 7541 7592 270787070 270787019 3.060000e-04 58.4
59 TraesCS3D01G120000 chr6A 89.130 46 4 1 7541 7585 551985849 551985804 1.000000e-03 56.5
60 TraesCS3D01G120000 chr1B 87.692 65 8 0 7603 7667 8616504 8616440 8.460000e-10 76.8
61 TraesCS3D01G120000 chr1B 93.182 44 2 1 7539 7582 229528589 229528547 6.590000e-06 63.9
62 TraesCS3D01G120000 chr4B 87.692 65 5 3 7540 7601 193409161 193409225 1.090000e-08 73.1
63 TraesCS3D01G120000 chr4B 90.000 50 3 2 7532 7581 278424932 278424979 6.590000e-06 63.9
64 TraesCS3D01G120000 chr4B 89.583 48 3 2 7535 7581 575682408 575682454 8.520000e-05 60.2
65 TraesCS3D01G120000 chr4B 92.683 41 1 2 7541 7581 610436953 610436991 3.060000e-04 58.4
66 TraesCS3D01G120000 chr4A 90.566 53 2 3 7530 7581 521268580 521268630 5.090000e-07 67.6
67 TraesCS3D01G120000 chr2D 90.741 54 0 5 7533 7583 55402139 55402088 5.090000e-07 67.6
68 TraesCS3D01G120000 chr2D 88.462 52 5 1 7533 7584 334149027 334149077 2.370000e-05 62.1
69 TraesCS3D01G120000 chr2D 100.000 29 0 0 3445 3473 62026259 62026287 4.000000e-03 54.7
70 TraesCS3D01G120000 chr5A 87.719 57 5 2 7529 7585 362144195 362144249 1.830000e-06 65.8
71 TraesCS3D01G120000 chr5A 88.889 54 5 1 7534 7587 398893635 398893583 1.830000e-06 65.8
72 TraesCS3D01G120000 chr7B 85.000 60 7 2 7528 7585 373778215 373778274 8.520000e-05 60.2
73 TraesCS3D01G120000 chr7B 100.000 28 0 0 3445 3472 59924356 59924383 1.400000e-02 52.8
74 TraesCS3D01G120000 chr1A 92.500 40 3 0 7541 7580 354065104 354065143 3.060000e-04 58.4
75 TraesCS3D01G120000 chrUn 100.000 28 0 0 7541 7568 68839206 68839179 1.400000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G120000 chr3D 75732947 75740807 7860 False 14517.0 14517 100.0000 1 7861 1 chr3D.!!$F2 7860
1 TraesCS3D01G120000 chr3D 362876951 362878229 1278 True 2085.0 2085 96.1000 2162 3440 1 chr3D.!!$R1 1278
2 TraesCS3D01G120000 chr3A 90277462 90284049 6587 False 1366.4 4608 86.6106 1 7746 5 chr3A.!!$F2 7745
3 TraesCS3D01G120000 chr3B 122572391 122581385 8994 False 1445.4 3535 88.2510 1 7856 5 chr3B.!!$F2 7855
4 TraesCS3D01G120000 chr5D 441123187 441124460 1273 True 2141.0 2141 97.0200 2160 3431 1 chr5D.!!$R3 1271
5 TraesCS3D01G120000 chr1D 480620417 480621700 1283 True 2134.0 2134 96.6590 2159 3442 1 chr1D.!!$R5 1283
6 TraesCS3D01G120000 chr1D 216318365 216319648 1283 True 2124.0 2124 96.5760 2163 3443 1 chr1D.!!$R1 1280
7 TraesCS3D01G120000 chr1D 61948850 61950126 1276 False 2108.0 2108 96.4790 2162 3436 1 chr1D.!!$F1 1274
8 TraesCS3D01G120000 chr1D 467781936 467783206 1270 False 2106.0 2106 96.6170 2163 3430 1 chr1D.!!$F4 1267
9 TraesCS3D01G120000 chr7D 162015705 162016989 1284 True 2109.0 2109 96.3420 2161 3442 1 chr7D.!!$R1 1281
10 TraesCS3D01G120000 chr7D 66101860 66103138 1278 False 2089.0 2089 96.1720 2160 3436 1 chr7D.!!$F2 1276
11 TraesCS3D01G120000 chr4D 484763131 484764399 1268 True 2109.0 2109 96.6960 2161 3428 1 chr4D.!!$R3 1267

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
442 467 0.249911 ACTGACAACCTGAACCTCGC 60.250 55.0 0.00 0.0 0.00 5.03 F
1017 1071 0.107459 GCATGTGAGTTCCTCCTCCC 60.107 60.0 0.00 0.0 0.00 4.30 F
1889 2009 0.109342 AGTAGCAGCAGCAACTTGGT 59.891 50.0 3.17 0.0 45.49 3.67 F
2115 2626 0.531090 GTGTGCTGACGTGGGTTGTA 60.531 55.0 0.00 0.0 0.00 2.41 F
3453 3967 0.113190 GGGAGGGGGCCATCTAAATG 59.887 60.0 4.39 0.0 0.00 2.32 F
5217 5913 0.374758 CGTTGCTGATCGATGTTGGG 59.625 55.0 0.54 0.0 0.00 4.12 F
5372 6068 0.255318 CCTGATCAGCTTTGCCTCCT 59.745 55.0 17.76 0.0 0.00 3.69 F
5956 6672 0.391263 GACCTGTCCGTCCAACATCC 60.391 60.0 0.00 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2423 2934 0.108424 AGAAGCACGCCAGACTGATC 60.108 55.0 3.32 0.00 0.00 2.92 R
2478 2989 0.632835 ATGGATTGATGGCAGGTGGT 59.367 50.0 0.00 0.00 0.00 4.16 R
2818 3329 0.821301 TGGAGGCATCGTTGTTGCAA 60.821 50.0 0.00 0.00 41.95 4.08 R
3999 4533 0.521735 GGATTGAGTGTTGAACGGCC 59.478 55.0 0.00 0.00 0.00 6.13 R
5353 6049 0.255318 AGGAGGCAAAGCTGATCAGG 59.745 55.0 23.89 8.49 0.00 3.86 R
6535 7394 0.103026 TCAGGAACATCTGGCGATCG 59.897 55.0 11.69 11.69 35.58 3.69 R
6540 7399 0.465705 TCGGATCAGGAACATCTGGC 59.534 55.0 0.00 0.00 35.58 4.85 R
7822 11106 0.172578 TACGACAACGCTGATGGAGG 59.827 55.0 0.00 0.00 43.96 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
112 117 3.465403 CCCTGGGCCGAGAGACTG 61.465 72.222 17.59 0.00 0.00 3.51
113 118 4.154347 CCTGGGCCGAGAGACTGC 62.154 72.222 17.59 0.00 0.00 4.40
114 119 3.385384 CTGGGCCGAGAGACTGCA 61.385 66.667 9.58 0.00 0.00 4.41
115 120 2.922503 TGGGCCGAGAGACTGCAA 60.923 61.111 0.00 0.00 0.00 4.08
116 121 2.249413 CTGGGCCGAGAGACTGCAAT 62.249 60.000 9.58 0.00 0.00 3.56
117 122 1.522580 GGGCCGAGAGACTGCAATC 60.523 63.158 0.00 0.00 0.00 2.67
118 123 1.519719 GGCCGAGAGACTGCAATCT 59.480 57.895 0.00 0.00 0.00 2.40
157 162 1.081509 CCGTGAAATTGTGGCGGTG 60.082 57.895 0.00 0.00 37.87 4.94
251 274 2.032071 GTGGTGGGGTCAACTCGG 59.968 66.667 0.00 0.00 0.00 4.63
322 347 3.036084 GTCCACACGGTCGCTGTG 61.036 66.667 14.63 14.63 45.33 3.66
323 348 4.961511 TCCACACGGTCGCTGTGC 62.962 66.667 15.72 0.00 43.84 4.57
341 366 3.108144 GTGCAAACGATGATATGGCAAC 58.892 45.455 0.00 0.00 0.00 4.17
342 367 2.223226 TGCAAACGATGATATGGCAACG 60.223 45.455 0.00 0.00 39.53 4.10
343 368 2.031560 GCAAACGATGATATGGCAACGA 59.968 45.455 0.00 0.00 37.47 3.85
344 369 3.846023 GCAAACGATGATATGGCAACGAG 60.846 47.826 0.00 0.00 37.47 4.18
346 371 3.179443 ACGATGATATGGCAACGAGTT 57.821 42.857 0.00 0.00 37.47 3.01
347 372 3.123804 ACGATGATATGGCAACGAGTTC 58.876 45.455 0.00 0.00 37.47 3.01
348 373 2.476619 CGATGATATGGCAACGAGTTCC 59.523 50.000 0.00 0.00 36.34 3.62
351 376 2.499693 TGATATGGCAACGAGTTCCAGA 59.500 45.455 0.00 8.05 42.51 3.86
352 377 3.055458 TGATATGGCAACGAGTTCCAGAA 60.055 43.478 0.00 4.98 42.51 3.02
353 378 2.270352 ATGGCAACGAGTTCCAGAAA 57.730 45.000 0.00 0.00 42.51 2.52
354 379 2.045561 TGGCAACGAGTTCCAGAAAA 57.954 45.000 0.00 0.00 42.51 2.29
356 381 2.955660 TGGCAACGAGTTCCAGAAAAAT 59.044 40.909 0.00 0.00 42.51 1.82
358 383 3.004315 GGCAACGAGTTCCAGAAAAATGA 59.996 43.478 0.00 0.00 0.00 2.57
359 384 4.321230 GGCAACGAGTTCCAGAAAAATGAT 60.321 41.667 0.00 0.00 0.00 2.45
360 385 5.106317 GGCAACGAGTTCCAGAAAAATGATA 60.106 40.000 0.00 0.00 0.00 2.15
361 386 6.404734 GGCAACGAGTTCCAGAAAAATGATAT 60.405 38.462 0.00 0.00 0.00 1.63
362 387 6.470235 GCAACGAGTTCCAGAAAAATGATATG 59.530 38.462 0.00 0.00 0.00 1.78
365 390 5.505173 AGTTCCAGAAAAATGATATGGCG 57.495 39.130 0.00 0.00 0.00 5.69
366 391 3.988379 TCCAGAAAAATGATATGGCGC 57.012 42.857 0.00 0.00 0.00 6.53
367 392 3.286353 TCCAGAAAAATGATATGGCGCA 58.714 40.909 10.83 0.00 0.00 6.09
384 409 3.441244 CAGCATGCTTAGTCGGTCA 57.559 52.632 19.98 0.00 0.00 4.02
385 410 1.002366 CAGCATGCTTAGTCGGTCAC 58.998 55.000 19.98 0.00 0.00 3.67
387 412 1.208052 AGCATGCTTAGTCGGTCACAT 59.792 47.619 16.30 0.00 0.00 3.21
388 413 2.009774 GCATGCTTAGTCGGTCACATT 58.990 47.619 11.37 0.00 0.00 2.71
390 415 3.728864 GCATGCTTAGTCGGTCACATTTG 60.729 47.826 11.37 0.00 0.00 2.32
393 418 2.422597 CTTAGTCGGTCACATTTGGCA 58.577 47.619 0.00 0.00 0.00 4.92
394 419 2.552599 TAGTCGGTCACATTTGGCAA 57.447 45.000 0.00 0.00 0.00 4.52
395 420 1.686355 AGTCGGTCACATTTGGCAAA 58.314 45.000 16.01 16.01 0.00 3.68
396 421 2.028130 AGTCGGTCACATTTGGCAAAA 58.972 42.857 17.70 0.00 0.00 2.44
397 422 2.428890 AGTCGGTCACATTTGGCAAAAA 59.571 40.909 17.70 0.00 0.00 1.94
417 442 4.654091 AAAAATGGTCAGTTGGTCACAG 57.346 40.909 0.00 0.00 0.00 3.66
418 443 3.297134 AAATGGTCAGTTGGTCACAGT 57.703 42.857 0.00 0.00 0.00 3.55
419 444 2.260844 ATGGTCAGTTGGTCACAGTG 57.739 50.000 0.00 0.00 0.00 3.66
420 445 1.199615 TGGTCAGTTGGTCACAGTGA 58.800 50.000 0.00 0.00 0.00 3.41
421 446 1.134521 TGGTCAGTTGGTCACAGTGAC 60.135 52.381 23.60 23.60 46.23 3.67
436 461 3.627395 AGTGACAACTGACAACCTGAA 57.373 42.857 0.00 0.00 34.48 3.02
437 462 3.270877 AGTGACAACTGACAACCTGAAC 58.729 45.455 0.00 0.00 34.48 3.18
438 463 2.354821 GTGACAACTGACAACCTGAACC 59.645 50.000 0.00 0.00 0.00 3.62
439 464 2.238646 TGACAACTGACAACCTGAACCT 59.761 45.455 0.00 0.00 0.00 3.50
440 465 2.872858 GACAACTGACAACCTGAACCTC 59.127 50.000 0.00 0.00 0.00 3.85
441 466 1.867233 CAACTGACAACCTGAACCTCG 59.133 52.381 0.00 0.00 0.00 4.63
442 467 0.249911 ACTGACAACCTGAACCTCGC 60.250 55.000 0.00 0.00 0.00 5.03
459 484 0.738412 CGCGGGTAGATCCAAAACGT 60.738 55.000 0.00 0.00 38.11 3.99
460 485 1.469595 CGCGGGTAGATCCAAAACGTA 60.470 52.381 0.00 0.00 38.11 3.57
496 526 1.202627 GCTCAGAAGATTCAGCCGGAT 60.203 52.381 5.05 0.00 0.00 4.18
555 585 2.048597 CGGAGCCAAGCGTGTGTA 60.049 61.111 0.00 0.00 0.00 2.90
564 594 2.412870 CAAGCGTGTGTATGTGGAGAA 58.587 47.619 0.00 0.00 0.00 2.87
670 713 4.781959 GGCGCGCGTACAGGTACA 62.782 66.667 32.35 0.00 35.87 2.90
671 714 3.245315 GCGCGCGTACAGGTACAG 61.245 66.667 32.35 0.00 35.87 2.74
786 829 2.203998 CCACCTCCACCTCCACCT 60.204 66.667 0.00 0.00 0.00 4.00
807 850 0.900647 CACTCTCCAACCCGTCTCCT 60.901 60.000 0.00 0.00 0.00 3.69
838 881 2.474612 CGCCCGAATAAAACCCCCG 61.475 63.158 0.00 0.00 0.00 5.73
842 885 1.378778 CGAATAAAACCCCCGGGCA 60.379 57.895 17.73 0.00 39.32 5.36
881 924 0.813610 CACCGCCAATCCGCTATTGA 60.814 55.000 9.53 0.00 46.81 2.57
901 947 2.762535 TAACCACAGTTGAGCTAGCC 57.237 50.000 12.13 3.49 36.68 3.93
911 957 2.754658 AGCTAGCCGCGTACACCT 60.755 61.111 12.13 0.00 45.59 4.00
913 959 2.024305 CTAGCCGCGTACACCTCG 59.976 66.667 4.92 0.00 0.00 4.63
914 960 2.436469 TAGCCGCGTACACCTCGA 60.436 61.111 4.92 0.00 0.00 4.04
969 1018 4.344102 CCGGGAAGACATTATCAAGGAGTA 59.656 45.833 0.00 0.00 0.00 2.59
1017 1071 0.107459 GCATGTGAGTTCCTCCTCCC 60.107 60.000 0.00 0.00 0.00 4.30
1043 1103 1.909141 CTCTGTCCGCTTGCTTGCTG 61.909 60.000 0.00 0.00 0.00 4.41
1082 1142 0.739813 ACGAACACCATAAGCTCGCC 60.740 55.000 0.00 0.00 32.86 5.54
1159 1219 7.617041 ACATTAGAACTCTAACCAAATCAGC 57.383 36.000 1.30 0.00 40.81 4.26
1165 1225 4.319177 ACTCTAACCAAATCAGCACAGAC 58.681 43.478 0.00 0.00 0.00 3.51
1242 1302 1.215647 GGATCTGTTCGGCTGTCGT 59.784 57.895 0.09 0.00 40.32 4.34
1246 1306 3.553437 CTGTTCGGCTGTCGTCCGT 62.553 63.158 0.09 0.00 46.49 4.69
1247 1307 2.355481 GTTCGGCTGTCGTCCGTT 60.355 61.111 0.09 0.00 46.49 4.44
1295 1355 7.874940 ACCGAATAGTATAATACGCAACAGTA 58.125 34.615 0.00 0.00 0.00 2.74
1298 1358 7.536281 CGAATAGTATAATACGCAACAGTAGCA 59.464 37.037 0.00 0.00 0.00 3.49
1299 1359 9.188588 GAATAGTATAATACGCAACAGTAGCAA 57.811 33.333 0.00 0.00 0.00 3.91
1454 1522 4.600111 AGAGGTAGGATCGGATTCTCTACT 59.400 45.833 1.02 0.00 33.06 2.57
1462 1530 1.595003 CGGATTCTCTACTGCGACGTC 60.595 57.143 5.18 5.18 0.00 4.34
1467 1535 2.202623 CTACTGCGACGTCCAGCC 60.203 66.667 24.90 8.15 33.65 4.85
1468 1536 2.986979 TACTGCGACGTCCAGCCA 60.987 61.111 24.90 15.14 33.65 4.75
1507 1575 0.914551 CTAATCAAGGTGCGTCGTCG 59.085 55.000 0.00 0.00 40.37 5.12
1537 1605 6.378564 TGATTTAGTTACTCACCCTCTCTGAG 59.621 42.308 0.00 0.00 40.97 3.35
1540 1608 4.850680 AGTTACTCACCCTCTCTGAGTAG 58.149 47.826 4.32 1.33 46.80 2.57
1541 1609 4.290196 AGTTACTCACCCTCTCTGAGTAGT 59.710 45.833 4.32 0.00 46.80 2.73
1542 1610 5.488203 AGTTACTCACCCTCTCTGAGTAGTA 59.512 44.000 4.32 2.61 46.80 1.82
1552 1620 7.776500 ACCCTCTCTGAGTAGTAAGATTCTAAC 59.224 40.741 4.32 0.00 0.00 2.34
1554 1622 7.776030 CCTCTCTGAGTAGTAAGATTCTAACCA 59.224 40.741 4.32 0.00 0.00 3.67
1558 1626 5.163581 TGAGTAGTAAGATTCTAACCACGGC 60.164 44.000 0.00 0.00 0.00 5.68
1561 1629 4.284178 AGTAAGATTCTAACCACGGCCTA 58.716 43.478 0.00 0.00 0.00 3.93
1562 1630 3.821421 AAGATTCTAACCACGGCCTAG 57.179 47.619 0.00 0.00 0.00 3.02
1564 1632 3.577919 AGATTCTAACCACGGCCTAGAT 58.422 45.455 0.00 0.00 0.00 1.98
1565 1633 3.322254 AGATTCTAACCACGGCCTAGATG 59.678 47.826 0.00 0.00 0.00 2.90
1566 1634 2.447408 TCTAACCACGGCCTAGATGA 57.553 50.000 0.00 0.00 0.00 2.92
1567 1635 2.029623 TCTAACCACGGCCTAGATGAC 58.970 52.381 0.00 0.00 0.00 3.06
1568 1636 0.742505 TAACCACGGCCTAGATGACG 59.257 55.000 0.00 0.00 0.00 4.35
1570 1638 0.755698 ACCACGGCCTAGATGACGAT 60.756 55.000 0.00 0.00 0.00 3.73
1571 1639 0.389391 CCACGGCCTAGATGACGATT 59.611 55.000 0.00 0.00 0.00 3.34
1573 1641 2.035449 CCACGGCCTAGATGACGATTAA 59.965 50.000 0.00 0.00 0.00 1.40
1574 1642 3.050619 CACGGCCTAGATGACGATTAAC 58.949 50.000 0.00 0.00 0.00 2.01
1576 1644 2.296471 CGGCCTAGATGACGATTAACCT 59.704 50.000 0.00 0.00 0.00 3.50
1577 1645 3.654414 GGCCTAGATGACGATTAACCTG 58.346 50.000 0.00 0.00 0.00 4.00
1578 1646 3.069729 GGCCTAGATGACGATTAACCTGT 59.930 47.826 0.00 0.00 0.00 4.00
1579 1647 4.051922 GCCTAGATGACGATTAACCTGTG 58.948 47.826 0.00 0.00 0.00 3.66
1598 1676 4.076394 TGTGTTTAGTGGCTGGGATAAAC 58.924 43.478 0.00 0.00 38.18 2.01
1600 1678 2.681344 GTTTAGTGGCTGGGATAAACGG 59.319 50.000 0.00 0.00 30.91 4.44
1601 1679 0.834612 TAGTGGCTGGGATAAACGGG 59.165 55.000 0.00 0.00 0.00 5.28
1602 1680 0.912487 AGTGGCTGGGATAAACGGGA 60.912 55.000 0.00 0.00 0.00 5.14
1615 1693 3.545366 AAACGGGAGGAATCTCTAAGC 57.455 47.619 0.00 0.00 39.86 3.09
1632 1710 3.686622 GCTCATGTAGCGGATGGAA 57.313 52.632 0.00 0.00 42.53 3.53
1633 1711 1.221414 GCTCATGTAGCGGATGGAAC 58.779 55.000 0.00 0.00 42.53 3.62
1634 1712 1.871080 CTCATGTAGCGGATGGAACC 58.129 55.000 0.00 0.00 0.00 3.62
1644 1757 0.244450 GGATGGAACCGTACGTGTGA 59.756 55.000 15.21 1.07 0.00 3.58
1661 1774 9.245962 GTACGTGTGAAAATATCTAGCAGTAAT 57.754 33.333 0.00 0.00 0.00 1.89
1674 1787 8.824756 ATCTAGCAGTAATATATCCCGAAGAA 57.175 34.615 0.00 0.00 0.00 2.52
1675 1788 8.645814 TCTAGCAGTAATATATCCCGAAGAAA 57.354 34.615 0.00 0.00 0.00 2.52
1676 1789 8.740906 TCTAGCAGTAATATATCCCGAAGAAAG 58.259 37.037 0.00 0.00 0.00 2.62
1677 1790 7.540474 AGCAGTAATATATCCCGAAGAAAGA 57.460 36.000 0.00 0.00 0.00 2.52
1678 1791 8.140112 AGCAGTAATATATCCCGAAGAAAGAT 57.860 34.615 0.00 0.00 0.00 2.40
1679 1792 8.037758 AGCAGTAATATATCCCGAAGAAAGATG 58.962 37.037 0.00 0.00 0.00 2.90
1680 1793 7.201565 GCAGTAATATATCCCGAAGAAAGATGC 60.202 40.741 0.00 0.00 0.00 3.91
1681 1794 7.009631 CAGTAATATATCCCGAAGAAAGATGCG 59.990 40.741 0.00 0.00 0.00 4.73
1683 1796 1.656652 ATCCCGAAGAAAGATGCGTG 58.343 50.000 0.00 0.00 0.00 5.34
1687 1800 2.223112 CCCGAAGAAAGATGCGTGATTG 60.223 50.000 0.00 0.00 0.00 2.67
1688 1801 2.434761 CGAAGAAAGATGCGTGATTGC 58.565 47.619 0.00 0.00 0.00 3.56
1689 1802 2.789092 CGAAGAAAGATGCGTGATTGCC 60.789 50.000 0.00 0.00 0.00 4.52
1690 1803 2.119801 AGAAAGATGCGTGATTGCCT 57.880 45.000 0.00 0.00 0.00 4.75
1691 1804 3.266510 AGAAAGATGCGTGATTGCCTA 57.733 42.857 0.00 0.00 0.00 3.93
1692 1805 3.813443 AGAAAGATGCGTGATTGCCTAT 58.187 40.909 0.00 0.00 0.00 2.57
1693 1806 3.812053 AGAAAGATGCGTGATTGCCTATC 59.188 43.478 0.00 0.00 0.00 2.08
1694 1807 2.916702 AGATGCGTGATTGCCTATCA 57.083 45.000 0.00 0.00 40.96 2.15
1695 1808 3.413846 AGATGCGTGATTGCCTATCAT 57.586 42.857 2.39 0.00 44.75 2.45
1696 1809 3.748083 AGATGCGTGATTGCCTATCATT 58.252 40.909 2.39 0.00 44.75 2.57
1697 1810 3.750130 AGATGCGTGATTGCCTATCATTC 59.250 43.478 2.39 0.00 44.75 2.67
1698 1811 2.916640 TGCGTGATTGCCTATCATTCA 58.083 42.857 2.39 1.95 44.75 2.57
1699 1812 2.874086 TGCGTGATTGCCTATCATTCAG 59.126 45.455 2.39 0.00 44.75 3.02
1700 1813 3.133691 GCGTGATTGCCTATCATTCAGA 58.866 45.455 2.39 0.00 44.75 3.27
1701 1814 3.186001 GCGTGATTGCCTATCATTCAGAG 59.814 47.826 2.39 0.00 44.75 3.35
1702 1815 4.375272 CGTGATTGCCTATCATTCAGAGT 58.625 43.478 2.39 0.00 44.75 3.24
1703 1816 4.447054 CGTGATTGCCTATCATTCAGAGTC 59.553 45.833 2.39 0.00 44.75 3.36
1704 1817 5.363101 GTGATTGCCTATCATTCAGAGTCA 58.637 41.667 2.39 0.00 44.75 3.41
1705 1818 5.466058 GTGATTGCCTATCATTCAGAGTCAG 59.534 44.000 2.39 0.00 44.75 3.51
1706 1819 5.364735 TGATTGCCTATCATTCAGAGTCAGA 59.635 40.000 0.00 0.00 38.35 3.27
1707 1820 4.933505 TGCCTATCATTCAGAGTCAGAG 57.066 45.455 0.00 0.00 0.00 3.35
1721 1834 4.341806 AGAGTCAGAGGAGAATATGTGCAG 59.658 45.833 0.00 0.00 0.00 4.41
1748 1861 5.876651 AAAGGAAAGGATGGGATTATTGC 57.123 39.130 0.00 0.00 0.00 3.56
1797 1910 9.092876 CTTCCTAGCTTTACACAGAATTTAGAG 57.907 37.037 0.00 0.00 0.00 2.43
1809 1929 8.747471 ACACAGAATTTAGAGGTTACCTAGTAC 58.253 37.037 2.88 0.00 31.76 2.73
1810 1930 8.746530 CACAGAATTTAGAGGTTACCTAGTACA 58.253 37.037 2.88 0.00 31.76 2.90
1811 1931 8.968969 ACAGAATTTAGAGGTTACCTAGTACAG 58.031 37.037 2.88 0.00 31.76 2.74
1820 1940 9.850198 AGAGGTTACCTAGTACAGTAATCTAAG 57.150 37.037 2.88 0.00 39.45 2.18
1821 1941 9.625747 GAGGTTACCTAGTACAGTAATCTAAGT 57.374 37.037 2.88 0.00 39.45 2.24
1889 2009 0.109342 AGTAGCAGCAGCAACTTGGT 59.891 50.000 3.17 0.00 45.49 3.67
1890 2010 0.954452 GTAGCAGCAGCAACTTGGTT 59.046 50.000 3.17 0.00 45.49 3.67
1913 2036 0.730265 CGACAGAGAAGAGGAGGACG 59.270 60.000 0.00 0.00 0.00 4.79
1927 2050 0.613777 AGGACGGGACTAAGCAAAGG 59.386 55.000 0.00 0.00 0.00 3.11
1947 2070 4.464262 GCCCTAAGCAATCCTCCG 57.536 61.111 0.00 0.00 42.97 4.63
1949 2072 0.533085 GCCCTAAGCAATCCTCCGAC 60.533 60.000 0.00 0.00 42.97 4.79
1959 2082 0.822164 ATCCTCCGACCCAAACTACG 59.178 55.000 0.00 0.00 0.00 3.51
1973 2484 8.449251 ACCCAAACTACGTACAGATTTTTAAA 57.551 30.769 0.00 0.00 0.00 1.52
2011 2522 4.997565 GCTCCAAGCACAATTAATTAGCA 58.002 39.130 20.44 5.48 41.89 3.49
2012 2523 5.039333 GCTCCAAGCACAATTAATTAGCAG 58.961 41.667 20.44 14.32 41.89 4.24
2014 2525 6.588719 TCCAAGCACAATTAATTAGCAGTT 57.411 33.333 20.44 9.24 0.00 3.16
2015 2526 6.991938 TCCAAGCACAATTAATTAGCAGTTT 58.008 32.000 20.44 8.73 0.00 2.66
2017 2528 7.384660 TCCAAGCACAATTAATTAGCAGTTTTG 59.615 33.333 20.44 16.16 0.00 2.44
2068 2579 9.860898 AGTTTGGTTTCATTCATCTTTTATAGC 57.139 29.630 0.00 0.00 0.00 2.97
2069 2580 9.087424 GTTTGGTTTCATTCATCTTTTATAGCC 57.913 33.333 0.00 0.00 0.00 3.93
2071 2582 8.537728 TGGTTTCATTCATCTTTTATAGCCAT 57.462 30.769 0.00 0.00 0.00 4.40
2072 2583 8.980596 TGGTTTCATTCATCTTTTATAGCCATT 58.019 29.630 0.00 0.00 0.00 3.16
2092 2603 9.887629 AGCCATTAGATGTGATTCTATAAGATG 57.112 33.333 0.00 0.00 0.00 2.90
2093 2604 8.610896 GCCATTAGATGTGATTCTATAAGATGC 58.389 37.037 0.00 0.00 0.00 3.91
2096 2607 8.748380 TTAGATGTGATTCTATAAGATGCGTG 57.252 34.615 0.00 0.00 0.00 5.34
2097 2608 6.753180 AGATGTGATTCTATAAGATGCGTGT 58.247 36.000 0.00 0.00 0.00 4.49
2098 2609 6.644181 AGATGTGATTCTATAAGATGCGTGTG 59.356 38.462 0.00 0.00 0.00 3.82
2099 2610 5.660460 TGTGATTCTATAAGATGCGTGTGT 58.340 37.500 0.00 0.00 0.00 3.72
2100 2611 5.519927 TGTGATTCTATAAGATGCGTGTGTG 59.480 40.000 0.00 0.00 0.00 3.82
2101 2612 4.507756 TGATTCTATAAGATGCGTGTGTGC 59.492 41.667 0.00 0.00 0.00 4.57
2102 2613 3.801114 TCTATAAGATGCGTGTGTGCT 57.199 42.857 0.00 0.00 35.36 4.40
2103 2614 3.447742 TCTATAAGATGCGTGTGTGCTG 58.552 45.455 0.00 0.00 35.36 4.41
2104 2615 2.385013 ATAAGATGCGTGTGTGCTGA 57.615 45.000 0.00 0.00 35.36 4.26
2105 2616 1.428448 TAAGATGCGTGTGTGCTGAC 58.572 50.000 0.00 0.00 35.36 3.51
2107 2618 2.280119 ATGCGTGTGTGCTGACGT 60.280 55.556 0.00 0.00 37.89 4.34
2108 2619 2.484631 GATGCGTGTGTGCTGACGTG 62.485 60.000 0.00 0.00 37.89 4.49
2109 2620 4.000557 GCGTGTGTGCTGACGTGG 62.001 66.667 0.00 0.00 37.89 4.94
2110 2621 3.337889 CGTGTGTGCTGACGTGGG 61.338 66.667 0.00 0.00 0.00 4.61
2113 2624 1.817520 TGTGTGCTGACGTGGGTTG 60.818 57.895 0.00 0.00 0.00 3.77
2114 2625 1.817941 GTGTGCTGACGTGGGTTGT 60.818 57.895 0.00 0.00 0.00 3.32
2115 2626 0.531090 GTGTGCTGACGTGGGTTGTA 60.531 55.000 0.00 0.00 0.00 2.41
2117 2628 1.076332 GTGCTGACGTGGGTTGTATC 58.924 55.000 0.00 0.00 0.00 2.24
2118 2629 0.973632 TGCTGACGTGGGTTGTATCT 59.026 50.000 0.00 0.00 0.00 1.98
2120 2631 1.337823 GCTGACGTGGGTTGTATCTGT 60.338 52.381 0.00 0.00 0.00 3.41
2121 2632 2.870435 GCTGACGTGGGTTGTATCTGTT 60.870 50.000 0.00 0.00 0.00 3.16
2122 2633 3.399330 CTGACGTGGGTTGTATCTGTTT 58.601 45.455 0.00 0.00 0.00 2.83
2123 2634 3.811083 TGACGTGGGTTGTATCTGTTTT 58.189 40.909 0.00 0.00 0.00 2.43
2124 2635 4.200874 TGACGTGGGTTGTATCTGTTTTT 58.799 39.130 0.00 0.00 0.00 1.94
2125 2636 4.035792 TGACGTGGGTTGTATCTGTTTTTG 59.964 41.667 0.00 0.00 0.00 2.44
2127 2638 4.399934 ACGTGGGTTGTATCTGTTTTTGTT 59.600 37.500 0.00 0.00 0.00 2.83
2128 2639 5.105675 ACGTGGGTTGTATCTGTTTTTGTTT 60.106 36.000 0.00 0.00 0.00 2.83
2129 2640 5.808030 CGTGGGTTGTATCTGTTTTTGTTTT 59.192 36.000 0.00 0.00 0.00 2.43
2130 2641 6.020201 CGTGGGTTGTATCTGTTTTTGTTTTC 60.020 38.462 0.00 0.00 0.00 2.29
2133 2644 7.547370 TGGGTTGTATCTGTTTTTGTTTTCAAG 59.453 33.333 0.00 0.00 41.09 3.02
2134 2645 7.762159 GGGTTGTATCTGTTTTTGTTTTCAAGA 59.238 33.333 0.00 0.00 41.09 3.02
2135 2646 9.313118 GGTTGTATCTGTTTTTGTTTTCAAGAT 57.687 29.630 0.00 0.00 41.09 2.40
2141 2652 9.820725 ATCTGTTTTTGTTTTCAAGATGAATGA 57.179 25.926 0.00 0.00 41.09 2.57
2142 2653 9.304731 TCTGTTTTTGTTTTCAAGATGAATGAG 57.695 29.630 0.00 0.00 41.09 2.90
2143 2654 9.304731 CTGTTTTTGTTTTCAAGATGAATGAGA 57.695 29.630 0.00 0.00 41.09 3.27
2144 2655 9.086336 TGTTTTTGTTTTCAAGATGAATGAGAC 57.914 29.630 0.00 0.00 41.09 3.36
2145 2656 8.542953 GTTTTTGTTTTCAAGATGAATGAGACC 58.457 33.333 0.00 0.00 41.09 3.85
2146 2657 6.957920 TTGTTTTCAAGATGAATGAGACCA 57.042 33.333 0.00 0.00 36.11 4.02
2147 2658 6.957920 TGTTTTCAAGATGAATGAGACCAA 57.042 33.333 0.00 0.00 36.11 3.67
2148 2659 7.345422 TGTTTTCAAGATGAATGAGACCAAA 57.655 32.000 0.00 0.00 36.11 3.28
2149 2660 7.954835 TGTTTTCAAGATGAATGAGACCAAAT 58.045 30.769 0.00 0.00 36.11 2.32
2150 2661 8.423349 TGTTTTCAAGATGAATGAGACCAAATT 58.577 29.630 0.00 0.00 36.11 1.82
2151 2662 9.912634 GTTTTCAAGATGAATGAGACCAAATTA 57.087 29.630 0.00 0.00 36.11 1.40
2293 2804 2.965147 AGCCACCAAACTAAGCAACATT 59.035 40.909 0.00 0.00 0.00 2.71
2321 2832 5.047306 CGCTATCCCTATCCAGTTGATGTAA 60.047 44.000 0.00 0.00 34.76 2.41
2396 2907 4.785376 ACATCTAAGACTTGAGGTCCCAAT 59.215 41.667 0.00 0.00 45.54 3.16
2455 2966 1.004440 GCTTCTCAACCAGGACGCT 60.004 57.895 0.00 0.00 0.00 5.07
2478 2989 4.849310 GGTATGAGGCCGCCGCAA 62.849 66.667 20.38 6.90 36.81 4.85
2818 3329 1.208052 CCCGATCAGGTTGATGTGACT 59.792 52.381 0.00 0.00 37.20 3.41
2825 3336 2.358582 CAGGTTGATGTGACTTGCAACA 59.641 45.455 14.15 0.00 41.65 3.33
3014 3527 2.060980 GCATCTCCTCACCGGTCCT 61.061 63.158 2.59 0.00 0.00 3.85
3449 3963 4.202030 GGGGGAGGGGGCCATCTA 62.202 72.222 4.39 0.00 0.00 1.98
3450 3964 2.038762 GGGGAGGGGGCCATCTAA 60.039 66.667 4.39 0.00 0.00 2.10
3451 3965 1.699930 GGGGAGGGGGCCATCTAAA 60.700 63.158 4.39 0.00 0.00 1.85
3452 3966 1.074296 GGGGAGGGGGCCATCTAAAT 61.074 60.000 4.39 0.00 0.00 1.40
3453 3967 0.113190 GGGAGGGGGCCATCTAAATG 59.887 60.000 4.39 0.00 0.00 2.32
3454 3968 1.149101 GGAGGGGGCCATCTAAATGA 58.851 55.000 4.39 0.00 34.61 2.57
3455 3969 1.074566 GGAGGGGGCCATCTAAATGAG 59.925 57.143 4.39 0.00 34.61 2.90
3456 3970 1.777272 GAGGGGGCCATCTAAATGAGT 59.223 52.381 4.39 0.00 34.61 3.41
3457 3971 2.175715 GAGGGGGCCATCTAAATGAGTT 59.824 50.000 4.39 0.00 34.61 3.01
3458 3972 2.175715 AGGGGGCCATCTAAATGAGTTC 59.824 50.000 4.39 0.00 34.61 3.01
3459 3973 2.175715 GGGGGCCATCTAAATGAGTTCT 59.824 50.000 4.39 0.00 34.61 3.01
3460 3974 3.394606 GGGGGCCATCTAAATGAGTTCTA 59.605 47.826 4.39 0.00 34.61 2.10
3461 3975 4.505742 GGGGGCCATCTAAATGAGTTCTAG 60.506 50.000 4.39 0.00 34.61 2.43
3462 3976 4.505742 GGGGCCATCTAAATGAGTTCTAGG 60.506 50.000 4.39 0.00 34.61 3.02
3463 3977 4.068599 GGCCATCTAAATGAGTTCTAGGC 58.931 47.826 0.00 0.00 34.61 3.93
3464 3978 4.444876 GGCCATCTAAATGAGTTCTAGGCA 60.445 45.833 0.00 0.00 40.06 4.75
3465 3979 4.513318 GCCATCTAAATGAGTTCTAGGCAC 59.487 45.833 0.00 0.00 38.27 5.01
3466 3980 5.686124 GCCATCTAAATGAGTTCTAGGCACT 60.686 44.000 0.00 0.00 37.53 4.40
3467 3981 5.988561 CCATCTAAATGAGTTCTAGGCACTC 59.011 44.000 13.40 13.40 41.08 3.51
3468 3982 5.599999 TCTAAATGAGTTCTAGGCACTCC 57.400 43.478 16.20 4.17 40.12 3.85
3469 3983 3.636153 AAATGAGTTCTAGGCACTCCC 57.364 47.619 16.20 0.00 40.12 4.30
3470 3984 2.254152 ATGAGTTCTAGGCACTCCCA 57.746 50.000 16.20 4.50 40.12 4.37
3471 3985 2.254152 TGAGTTCTAGGCACTCCCAT 57.746 50.000 16.20 0.00 40.12 4.00
3472 3986 2.551270 TGAGTTCTAGGCACTCCCATT 58.449 47.619 16.20 0.00 40.12 3.16
3473 3987 3.719871 TGAGTTCTAGGCACTCCCATTA 58.280 45.455 16.20 0.39 40.12 1.90
3474 3988 3.706594 TGAGTTCTAGGCACTCCCATTAG 59.293 47.826 16.20 0.00 40.12 1.73
3475 3989 3.707102 GAGTTCTAGGCACTCCCATTAGT 59.293 47.826 10.44 0.00 41.75 2.24
3476 3990 4.104831 AGTTCTAGGCACTCCCATTAGTT 58.895 43.478 0.00 0.00 41.75 2.24
3477 3991 5.278061 AGTTCTAGGCACTCCCATTAGTTA 58.722 41.667 0.00 0.00 41.75 2.24
3478 3992 5.364157 AGTTCTAGGCACTCCCATTAGTTAG 59.636 44.000 0.00 0.00 41.75 2.34
3479 3993 4.223953 TCTAGGCACTCCCATTAGTTAGG 58.776 47.826 0.00 0.00 41.75 2.69
3480 3994 2.127708 AGGCACTCCCATTAGTTAGGG 58.872 52.381 0.00 0.00 46.90 3.53
3481 3995 1.477014 GGCACTCCCATTAGTTAGGGC 60.477 57.143 0.00 0.00 45.07 5.19
3482 3996 1.211949 GCACTCCCATTAGTTAGGGCA 59.788 52.381 0.00 0.00 45.07 5.36
3483 3997 2.158608 GCACTCCCATTAGTTAGGGCAT 60.159 50.000 0.00 0.00 45.07 4.40
3484 3998 3.688414 GCACTCCCATTAGTTAGGGCATT 60.688 47.826 0.00 0.00 45.07 3.56
3485 3999 4.536765 CACTCCCATTAGTTAGGGCATTT 58.463 43.478 0.00 0.00 45.07 2.32
3486 4000 4.956075 CACTCCCATTAGTTAGGGCATTTT 59.044 41.667 0.00 0.00 45.07 1.82
3487 4001 5.422012 CACTCCCATTAGTTAGGGCATTTTT 59.578 40.000 0.00 0.00 45.07 1.94
3488 4002 5.422012 ACTCCCATTAGTTAGGGCATTTTTG 59.578 40.000 0.00 0.00 45.07 2.44
3489 4003 5.337788 TCCCATTAGTTAGGGCATTTTTGT 58.662 37.500 0.00 0.00 45.07 2.83
3490 4004 5.782845 TCCCATTAGTTAGGGCATTTTTGTT 59.217 36.000 0.00 0.00 45.07 2.83
3491 4005 6.954684 TCCCATTAGTTAGGGCATTTTTGTTA 59.045 34.615 0.00 0.00 45.07 2.41
3492 4006 7.455008 TCCCATTAGTTAGGGCATTTTTGTTAA 59.545 33.333 0.00 0.00 45.07 2.01
3493 4007 8.264347 CCCATTAGTTAGGGCATTTTTGTTAAT 58.736 33.333 0.00 0.00 38.44 1.40
3494 4008 9.665719 CCATTAGTTAGGGCATTTTTGTTAATT 57.334 29.630 0.00 0.00 0.00 1.40
3498 4012 7.033185 AGTTAGGGCATTTTTGTTAATTAGCG 58.967 34.615 0.00 0.00 0.00 4.26
3502 4016 7.425606 AGGGCATTTTTGTTAATTAGCGATAG 58.574 34.615 0.00 0.00 0.00 2.08
3503 4017 7.284489 AGGGCATTTTTGTTAATTAGCGATAGA 59.716 33.333 0.00 0.00 39.76 1.98
3519 4033 5.128499 AGCGATAGATAATCCTGATGAAGGG 59.872 44.000 0.00 0.00 43.14 3.95
3524 4038 6.385766 AGATAATCCTGATGAAGGGATTCC 57.614 41.667 10.01 0.00 45.84 3.01
3527 4041 3.528905 AATCCTGATGAAGGGATTCCACA 59.471 43.478 4.80 2.22 45.84 4.17
3553 4067 6.007076 GTCTCTCTTTCCTTTTCCCTTCATT 58.993 40.000 0.00 0.00 0.00 2.57
3568 4082 4.142227 CCCTTCATTCAATCTCTTTGCCAG 60.142 45.833 0.00 0.00 35.16 4.85
3569 4083 4.461781 CCTTCATTCAATCTCTTTGCCAGT 59.538 41.667 0.00 0.00 35.16 4.00
3570 4084 5.649395 CCTTCATTCAATCTCTTTGCCAGTA 59.351 40.000 0.00 0.00 35.16 2.74
3571 4085 6.320672 CCTTCATTCAATCTCTTTGCCAGTAT 59.679 38.462 0.00 0.00 35.16 2.12
3572 4086 6.932356 TCATTCAATCTCTTTGCCAGTATC 57.068 37.500 0.00 0.00 35.16 2.24
3573 4087 6.417258 TCATTCAATCTCTTTGCCAGTATCA 58.583 36.000 0.00 0.00 35.16 2.15
3574 4088 7.058525 TCATTCAATCTCTTTGCCAGTATCAT 58.941 34.615 0.00 0.00 35.16 2.45
3597 4111 2.568696 TTTGTACGCTTTGCTTTGCA 57.431 40.000 0.00 0.00 36.47 4.08
3610 4124 2.207590 GCTTTGCAGCTTTGCTCTTTT 58.792 42.857 0.00 0.00 43.51 2.27
3611 4125 2.610833 GCTTTGCAGCTTTGCTCTTTTT 59.389 40.909 0.00 0.00 43.51 1.94
3661 4175 4.631377 AGCTTTGCTCTTTTGTTTTTCCAC 59.369 37.500 0.00 0.00 30.62 4.02
3662 4176 4.391523 GCTTTGCTCTTTTGTTTTTCCACA 59.608 37.500 0.00 0.00 0.00 4.17
3663 4177 5.106752 GCTTTGCTCTTTTGTTTTTCCACAA 60.107 36.000 0.00 0.00 34.76 3.33
3667 4190 5.936956 TGCTCTTTTGTTTTTCCACAAACAT 59.063 32.000 0.08 0.00 44.51 2.71
3711 4234 2.483106 CACATGACAGGCACAGAAAGAG 59.517 50.000 0.00 0.00 0.00 2.85
3716 4239 1.001860 ACAGGCACAGAAAGAGAGAGC 59.998 52.381 0.00 0.00 0.00 4.09
3717 4240 0.612744 AGGCACAGAAAGAGAGAGCC 59.387 55.000 0.00 0.00 40.85 4.70
3719 4242 1.065564 GGCACAGAAAGAGAGAGCCAT 60.066 52.381 0.00 0.00 40.29 4.40
3720 4243 2.008329 GCACAGAAAGAGAGAGCCATG 58.992 52.381 0.00 0.00 0.00 3.66
3721 4244 2.614987 GCACAGAAAGAGAGAGCCATGT 60.615 50.000 0.00 0.00 0.00 3.21
3722 4245 3.001414 CACAGAAAGAGAGAGCCATGTG 58.999 50.000 0.00 0.00 0.00 3.21
3723 4246 2.008329 CAGAAAGAGAGAGCCATGTGC 58.992 52.381 0.00 0.00 41.71 4.57
3743 4266 2.887568 GCGACTGTGCATCCTCCG 60.888 66.667 0.00 0.00 34.15 4.63
3801 4324 6.610425 TCTCTTTACTTACCTTACCTCCATCC 59.390 42.308 0.00 0.00 0.00 3.51
3939 4468 9.874205 TTTTTAATCATCCAGATCAAATTGGAC 57.126 29.630 3.67 0.00 45.66 4.02
3951 4480 5.497464 TCAAATTGGACACCACTCTATGA 57.503 39.130 0.00 0.00 30.78 2.15
3999 4533 1.741706 ACTTTTGATGGATCAGCAGCG 59.258 47.619 0.00 0.00 38.19 5.18
4001 4535 1.378882 TTTGATGGATCAGCAGCGGC 61.379 55.000 0.00 0.00 38.19 6.53
4012 4552 2.972505 CAGCGGCCGTTCAACACT 60.973 61.111 28.70 10.48 0.00 3.55
4037 4577 2.307686 TCCTAGCCGTTGAAAGGGAAAT 59.692 45.455 5.97 0.00 36.04 2.17
4040 4580 1.886542 AGCCGTTGAAAGGGAAATGAC 59.113 47.619 5.97 0.00 36.04 3.06
4054 4594 5.241728 AGGGAAATGACTAAGCAGTGAAAAC 59.758 40.000 0.00 0.00 34.21 2.43
4057 4597 7.361286 GGGAAATGACTAAGCAGTGAAAACTAG 60.361 40.741 0.00 0.00 34.21 2.57
4058 4598 6.487689 AATGACTAAGCAGTGAAAACTAGC 57.512 37.500 0.00 0.00 34.21 3.42
4113 4653 9.759473 TTACTCAGGTGGTAGTAGTTATTAGTT 57.241 33.333 0.00 0.00 30.27 2.24
4158 4781 3.945981 TTGCTGGTCGTTAGTCATGTA 57.054 42.857 0.00 0.00 0.00 2.29
4159 4782 4.465632 TTGCTGGTCGTTAGTCATGTAT 57.534 40.909 0.00 0.00 0.00 2.29
4160 4783 5.585820 TTGCTGGTCGTTAGTCATGTATA 57.414 39.130 0.00 0.00 0.00 1.47
4162 4785 4.037565 TGCTGGTCGTTAGTCATGTATAGG 59.962 45.833 0.00 0.00 0.00 2.57
4163 4786 4.558898 GCTGGTCGTTAGTCATGTATAGGG 60.559 50.000 0.00 0.00 0.00 3.53
4164 4787 4.539726 TGGTCGTTAGTCATGTATAGGGT 58.460 43.478 0.00 0.00 0.00 4.34
4165 4788 4.581824 TGGTCGTTAGTCATGTATAGGGTC 59.418 45.833 0.00 0.00 0.00 4.46
4166 4789 4.320057 GGTCGTTAGTCATGTATAGGGTCG 60.320 50.000 0.00 0.00 0.00 4.79
4167 4790 4.512944 GTCGTTAGTCATGTATAGGGTCGA 59.487 45.833 0.00 0.00 0.00 4.20
4168 4791 5.180868 GTCGTTAGTCATGTATAGGGTCGAT 59.819 44.000 0.00 0.00 0.00 3.59
4169 4792 6.369890 GTCGTTAGTCATGTATAGGGTCGATA 59.630 42.308 0.00 0.00 0.00 2.92
4170 4793 6.936335 TCGTTAGTCATGTATAGGGTCGATAA 59.064 38.462 0.00 0.00 0.00 1.75
4171 4794 7.609146 TCGTTAGTCATGTATAGGGTCGATAAT 59.391 37.037 0.00 0.00 0.00 1.28
4172 4795 8.886719 CGTTAGTCATGTATAGGGTCGATAATA 58.113 37.037 0.00 0.00 0.00 0.98
4274 4897 3.626924 AGCGGCTTGGAACGGTCT 61.627 61.111 0.00 0.00 35.80 3.85
4283 4906 3.332034 CTTGGAACGGTCTTAATTCGGT 58.668 45.455 0.00 0.00 0.00 4.69
4390 5024 1.550065 CGCGCCTATTCATAGATCCG 58.450 55.000 0.00 0.00 32.05 4.18
4623 5263 4.699522 GTGGTGGTGGAGCGGGAC 62.700 72.222 0.00 0.00 0.00 4.46
4652 5325 3.395702 TGCCGGCGTTACCATCCT 61.396 61.111 23.90 0.00 39.03 3.24
4668 5341 0.399091 TCCTTGCGATGGAGAGGGAT 60.399 55.000 0.00 0.00 0.00 3.85
4677 5350 4.162690 GAGAGGGATGGCGGCGTT 62.163 66.667 9.37 0.00 0.00 4.84
5067 5743 4.742201 CACTCCGAGTGGTGGCCG 62.742 72.222 19.29 0.00 42.35 6.13
5151 5827 0.966370 AGCTCTACGGTCAGTCCCAC 60.966 60.000 0.00 0.00 0.00 4.61
5152 5828 0.966370 GCTCTACGGTCAGTCCCACT 60.966 60.000 0.00 0.00 0.00 4.00
5167 5857 4.079253 GTCCCACTCCAAGCAGAAATTTA 58.921 43.478 0.00 0.00 0.00 1.40
5168 5858 4.079253 TCCCACTCCAAGCAGAAATTTAC 58.921 43.478 0.00 0.00 0.00 2.01
5169 5859 4.082125 CCCACTCCAAGCAGAAATTTACT 58.918 43.478 0.00 0.00 0.00 2.24
5170 5860 4.156739 CCCACTCCAAGCAGAAATTTACTC 59.843 45.833 0.00 0.00 0.00 2.59
5171 5861 4.142816 CCACTCCAAGCAGAAATTTACTCG 60.143 45.833 0.00 0.00 0.00 4.18
5172 5862 3.437049 ACTCCAAGCAGAAATTTACTCGC 59.563 43.478 0.00 0.00 0.00 5.03
5173 5863 2.415168 TCCAAGCAGAAATTTACTCGCG 59.585 45.455 0.00 0.00 0.00 5.87
5175 5865 1.726853 AGCAGAAATTTACTCGCGCT 58.273 45.000 5.56 0.00 0.00 5.92
5183 5873 7.376072 GCAGAAATTTACTCGCGCTTATTAAAT 59.624 33.333 5.56 7.39 0.00 1.40
5190 5880 6.216750 ACTCGCGCTTATTAAATCTTCATC 57.783 37.500 5.56 0.00 0.00 2.92
5191 5881 5.177696 ACTCGCGCTTATTAAATCTTCATCC 59.822 40.000 5.56 0.00 0.00 3.51
5217 5913 0.374758 CGTTGCTGATCGATGTTGGG 59.625 55.000 0.54 0.00 0.00 4.12
5222 5918 1.133025 GCTGATCGATGTTGGGGTTTG 59.867 52.381 0.54 0.00 0.00 2.93
5309 6005 2.363306 TCTTGCCTGCCTTTTCTCAA 57.637 45.000 0.00 0.00 0.00 3.02
5352 6048 3.341823 AGTCACATTCTTGGAGCATGTC 58.658 45.455 0.00 0.00 0.00 3.06
5365 6061 1.284198 AGCATGTCCCTGATCAGCTTT 59.716 47.619 17.76 0.00 0.00 3.51
5372 6068 0.255318 CCTGATCAGCTTTGCCTCCT 59.745 55.000 17.76 0.00 0.00 3.69
5382 6078 3.011257 AGCTTTGCCTCCTGGGTTAAATA 59.989 43.478 0.00 0.00 37.43 1.40
5488 6184 1.364626 CCTCAAGAGATGGTGCGTGC 61.365 60.000 0.00 0.00 0.00 5.34
5542 6238 2.624838 ACCAAGTTGCTGTGAAATCTGG 59.375 45.455 0.00 0.00 0.00 3.86
5568 6269 0.533491 TAACGAACGACTGGGGATGG 59.467 55.000 0.14 0.00 0.00 3.51
5569 6270 1.189524 AACGAACGACTGGGGATGGA 61.190 55.000 0.14 0.00 0.00 3.41
5570 6271 0.976073 ACGAACGACTGGGGATGGAT 60.976 55.000 0.14 0.00 0.00 3.41
5571 6272 0.530650 CGAACGACTGGGGATGGATG 60.531 60.000 0.00 0.00 0.00 3.51
5713 6418 1.183030 TTCATCACCGTCACCCTCGT 61.183 55.000 0.00 0.00 0.00 4.18
5780 6493 1.813753 TCAGGCTTAATGGCGTCGC 60.814 57.895 9.22 9.22 46.88 5.19
5831 6544 1.872952 TGCGTTCTGATCTGTTGGTTG 59.127 47.619 0.00 0.00 0.00 3.77
5903 6619 1.734477 CGTGTTCCTCTGCTGGTCG 60.734 63.158 0.00 0.00 0.00 4.79
5945 6661 4.405358 AGAGAGATGAATTCAGACCTGTCC 59.595 45.833 14.54 0.66 0.00 4.02
5956 6672 0.391263 GACCTGTCCGTCCAACATCC 60.391 60.000 0.00 0.00 0.00 3.51
6022 6745 7.879160 ACATCTTGTTTGCATGGTGAAATTTAT 59.121 29.630 0.00 0.00 35.28 1.40
6064 6787 0.595095 GCAACAGGAAAGCAGAGGTG 59.405 55.000 0.00 0.00 0.00 4.00
6070 6793 1.301716 GAAAGCAGAGGTGGCGACA 60.302 57.895 0.00 0.00 36.08 4.35
6103 6826 1.320555 CTCAACATCGCGGTAAGAACG 59.679 52.381 6.13 0.00 0.00 3.95
6116 6839 2.355717 AAGAACGCCTTCTCTCTTCG 57.644 50.000 0.00 0.00 35.52 3.79
6133 6856 8.306038 TCTCTCTTCGGTGATATACTACTACTC 58.694 40.741 0.00 0.00 0.00 2.59
6136 6859 9.577110 CTCTTCGGTGATATACTACTACTCTAG 57.423 40.741 0.00 0.00 0.00 2.43
6138 6861 9.709495 CTTCGGTGATATACTACTACTCTAGTT 57.291 37.037 0.00 0.00 40.14 2.24
6139 6862 9.703892 TTCGGTGATATACTACTACTCTAGTTC 57.296 37.037 0.00 0.00 40.14 3.01
6140 6863 8.864087 TCGGTGATATACTACTACTCTAGTTCA 58.136 37.037 0.00 0.00 40.14 3.18
6141 6864 9.142515 CGGTGATATACTACTACTCTAGTTCAG 57.857 40.741 0.00 0.00 40.14 3.02
6150 6873 7.981225 ACTACTACTCTAGTTCAGTACAGTAGC 59.019 40.741 14.32 0.00 40.14 3.58
6253 6978 4.826274 ATGTATGTACTGTTGGCAGAGT 57.174 40.909 6.50 6.50 45.28 3.24
6319 7044 4.715297 ACGGGGATAGACTCAAAGTGTATT 59.285 41.667 0.00 0.00 35.17 1.89
6470 7195 7.287061 TCAGGAAATGGAGAAGTAAGTTTCAA 58.713 34.615 0.00 0.00 0.00 2.69
6471 7196 7.445402 TCAGGAAATGGAGAAGTAAGTTTCAAG 59.555 37.037 0.00 0.00 0.00 3.02
6473 7198 5.966742 AATGGAGAAGTAAGTTTCAAGCC 57.033 39.130 0.00 0.00 0.00 4.35
6474 7199 3.751518 TGGAGAAGTAAGTTTCAAGCCC 58.248 45.455 0.00 0.00 0.00 5.19
6475 7200 3.137544 TGGAGAAGTAAGTTTCAAGCCCA 59.862 43.478 0.00 0.00 0.00 5.36
6476 7201 4.142038 GGAGAAGTAAGTTTCAAGCCCAA 58.858 43.478 0.00 0.00 0.00 4.12
6477 7202 4.583073 GGAGAAGTAAGTTTCAAGCCCAAA 59.417 41.667 0.00 0.00 0.00 3.28
6479 7204 4.953579 AGAAGTAAGTTTCAAGCCCAAACA 59.046 37.500 5.76 0.00 36.38 2.83
6481 7206 5.006153 AGTAAGTTTCAAGCCCAAACAAC 57.994 39.130 5.76 3.97 36.38 3.32
6485 7210 3.197549 AGTTTCAAGCCCAAACAACACAT 59.802 39.130 5.76 0.00 36.38 3.21
6486 7211 3.902881 TTCAAGCCCAAACAACACATT 57.097 38.095 0.00 0.00 0.00 2.71
6490 7349 2.106566 AGCCCAAACAACACATTGACA 58.893 42.857 0.00 0.00 39.30 3.58
6517 7376 6.524398 ACAGACTGAACTGACTGACTGCAG 62.524 50.000 13.48 13.48 42.73 4.41
6529 7388 1.852942 GACTGCAGTCAGAACGTTCA 58.147 50.000 36.23 7.67 44.18 3.18
6530 7389 1.789464 GACTGCAGTCAGAACGTTCAG 59.211 52.381 36.23 21.58 44.18 3.02
6531 7390 1.409064 ACTGCAGTCAGAACGTTCAGA 59.591 47.619 28.78 23.54 42.95 3.27
6540 7399 2.590276 CAGAACGTTCAGACTTCGATCG 59.410 50.000 28.78 9.36 33.09 3.69
6557 7416 0.465705 TCGCCAGATGTTCCTGATCC 59.534 55.000 0.00 0.00 36.29 3.36
6596 7455 4.707563 TGATTAACGCGTTGTCTGATTTG 58.292 39.130 33.40 0.00 0.00 2.32
6716 7575 5.048504 CCATTGCTGAGCTGAAGTTTTCTTA 60.049 40.000 5.83 0.00 40.61 2.10
6773 7632 5.359860 TGTGTACATCTACTGACGAATGGAT 59.640 40.000 0.00 0.00 0.00 3.41
6774 7633 5.687730 GTGTACATCTACTGACGAATGGATG 59.312 44.000 0.00 0.00 37.26 3.51
6785 7644 2.048498 CGAATGGATGATTTGCGCATG 58.952 47.619 12.75 0.00 0.00 4.06
6935 7794 7.954788 TCTACAAGAAAGAAAAGAGAGAAGC 57.045 36.000 0.00 0.00 0.00 3.86
6992 7851 1.224069 GACGCATGGACGGATGATGG 61.224 60.000 0.00 0.00 37.37 3.51
6993 7852 2.610694 CGCATGGACGGATGATGGC 61.611 63.158 0.00 0.00 0.00 4.40
7111 7977 6.197842 CCGAACGTGTTCCTCTTTGTATATAC 59.802 42.308 5.89 5.89 36.27 1.47
7189 8057 8.200120 TGAGTTGATTGTATATTCTCACTCCAG 58.800 37.037 0.00 0.00 0.00 3.86
7194 8062 9.605275 TGATTGTATATTCTCACTCCAGAAAAG 57.395 33.333 0.00 0.00 35.99 2.27
7265 8180 1.578926 CCGAAATGTTTGCGCCTGA 59.421 52.632 4.18 0.00 0.00 3.86
7299 10563 7.173735 AGGCCAAAATTCTTGAAATGTTTGATC 59.826 33.333 5.01 0.00 0.00 2.92
7381 10661 6.278172 ACTTAAAAGGTACCCTTAGACTCG 57.722 41.667 8.74 0.00 43.92 4.18
7382 10662 6.012745 ACTTAAAAGGTACCCTTAGACTCGA 58.987 40.000 8.74 0.00 43.92 4.04
7383 10663 4.797800 AAAAGGTACCCTTAGACTCGAC 57.202 45.455 8.74 0.00 43.92 4.20
7384 10664 3.735720 AAGGTACCCTTAGACTCGACT 57.264 47.619 8.74 0.00 42.74 4.18
7385 10665 3.002038 AGGTACCCTTAGACTCGACTG 57.998 52.381 8.74 0.00 0.00 3.51
7386 10666 1.404748 GGTACCCTTAGACTCGACTGC 59.595 57.143 0.00 0.00 0.00 4.40
7387 10667 1.404748 GTACCCTTAGACTCGACTGCC 59.595 57.143 0.00 0.00 0.00 4.85
7388 10668 1.313812 ACCCTTAGACTCGACTGCCG 61.314 60.000 0.00 0.00 40.25 5.69
7389 10669 1.030488 CCCTTAGACTCGACTGCCGA 61.030 60.000 0.00 0.00 46.35 5.54
7390 10670 0.099082 CCTTAGACTCGACTGCCGAC 59.901 60.000 0.00 0.00 43.23 4.79
7391 10671 1.088306 CTTAGACTCGACTGCCGACT 58.912 55.000 0.00 0.00 43.23 4.18
7392 10672 1.062880 CTTAGACTCGACTGCCGACTC 59.937 57.143 0.00 0.00 43.23 3.36
7393 10673 0.036671 TAGACTCGACTGCCGACTCA 60.037 55.000 0.00 0.00 43.23 3.41
7394 10674 0.678366 AGACTCGACTGCCGACTCAT 60.678 55.000 0.00 0.00 43.23 2.90
7395 10675 0.248296 GACTCGACTGCCGACTCATC 60.248 60.000 0.00 0.00 43.23 2.92
7413 10693 6.498538 ACTCATCTTTTCTCCCTTCTCTCTA 58.501 40.000 0.00 0.00 0.00 2.43
7421 10701 5.319043 TCTCCCTTCTCTCTATTCTCTCC 57.681 47.826 0.00 0.00 0.00 3.71
7441 10721 0.182299 CCATCTCCTTCCCTTGAGCC 59.818 60.000 0.00 0.00 0.00 4.70
7478 10758 0.405973 GCTCCCCACCTTTCCTTCTT 59.594 55.000 0.00 0.00 0.00 2.52
7568 10850 2.183504 ATGTCCGTGCGTTGCAACA 61.184 52.632 28.01 8.05 41.47 3.33
7580 10863 3.857093 GCGTTGCAACAGAAGAAGAAAAA 59.143 39.130 28.01 0.00 0.00 1.94
7604 10887 9.912634 AAAATACCACATGCTAATATATGTTGC 57.087 29.630 0.00 0.00 35.46 4.17
7605 10888 8.868522 AATACCACATGCTAATATATGTTGCT 57.131 30.769 0.00 0.00 35.46 3.91
7609 10892 7.449395 ACCACATGCTAATATATGTTGCTCATT 59.551 33.333 0.00 0.00 35.46 2.57
7614 10897 7.687445 TGCTAATATATGTTGCTCATTATGCG 58.313 34.615 0.00 0.00 37.91 4.73
7634 10917 3.772932 CGTTGTATCCGCTTGGTACTAA 58.227 45.455 0.00 0.00 0.00 2.24
7667 10951 8.190784 AGTCAATAAAAATGCCCTTTATCGAAG 58.809 33.333 0.00 0.00 30.41 3.79
7675 10959 3.450817 TGCCCTTTATCGAAGAGATGTGA 59.549 43.478 0.00 0.00 43.63 3.58
7690 10974 2.682155 TGTGACAGTGTGTTGCTACA 57.318 45.000 0.00 0.00 0.00 2.74
7699 10983 5.820423 ACAGTGTGTTGCTACAGTTTGATTA 59.180 36.000 0.00 0.00 34.24 1.75
7729 11013 9.665719 TTTTATTTTTAGGCCATGAGGAATTTC 57.334 29.630 5.01 0.00 36.89 2.17
7742 11026 4.647853 TGAGGAATTTCGCTAAGCCTAGTA 59.352 41.667 0.00 0.00 0.00 1.82
7746 11030 6.483640 AGGAATTTCGCTAAGCCTAGTATTTG 59.516 38.462 0.00 0.00 0.00 2.32
7754 11038 2.735151 AGCCTAGTATTTGTTTGGGCC 58.265 47.619 0.00 0.00 38.95 5.80
7782 11066 5.689819 AGCACATTTAGAATTGTCGTTGTC 58.310 37.500 0.00 0.00 0.00 3.18
7815 11099 5.538433 GGAGTGTAGAGATCAAGAAGCCTAT 59.462 44.000 0.00 0.00 0.00 2.57
7818 11102 5.918011 GTGTAGAGATCAAGAAGCCTATTCG 59.082 44.000 0.00 0.00 0.00 3.34
7819 11103 5.594725 TGTAGAGATCAAGAAGCCTATTCGT 59.405 40.000 0.00 0.00 0.00 3.85
7822 11106 6.045955 AGAGATCAAGAAGCCTATTCGTTTC 58.954 40.000 0.00 0.00 0.00 2.78
7824 11108 4.553330 TCAAGAAGCCTATTCGTTTCCT 57.447 40.909 0.00 0.00 0.00 3.36
7829 11113 3.477210 AGCCTATTCGTTTCCTCCATC 57.523 47.619 0.00 0.00 0.00 3.51
7830 11114 2.771943 AGCCTATTCGTTTCCTCCATCA 59.228 45.455 0.00 0.00 0.00 3.07
7833 11117 1.656652 ATTCGTTTCCTCCATCAGCG 58.343 50.000 0.00 0.00 0.00 5.18
7834 11118 0.320374 TTCGTTTCCTCCATCAGCGT 59.680 50.000 0.00 0.00 0.00 5.07
7839 11123 0.389817 TTCCTCCATCAGCGTTGTCG 60.390 55.000 0.00 0.00 40.37 4.35
7856 11140 3.578978 TGTCGTAATAGGGCCAAGGATA 58.421 45.455 6.18 0.00 0.00 2.59
7857 11141 3.576982 TGTCGTAATAGGGCCAAGGATAG 59.423 47.826 6.18 0.00 0.00 2.08
7858 11142 3.056035 GTCGTAATAGGGCCAAGGATAGG 60.056 52.174 6.18 0.00 0.00 2.57
7859 11143 3.170717 CGTAATAGGGCCAAGGATAGGA 58.829 50.000 6.18 0.00 0.00 2.94
7860 11144 3.775316 CGTAATAGGGCCAAGGATAGGAT 59.225 47.826 6.18 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 72 1.813753 CGTATCCGCCACAACTGGG 60.814 63.158 0.00 0.00 38.13 4.45
97 102 2.249413 ATTGCAGTCTCTCGGCCCAG 62.249 60.000 0.00 0.00 36.45 4.45
98 103 2.244117 GATTGCAGTCTCTCGGCCCA 62.244 60.000 1.27 0.00 36.45 5.36
100 105 0.529555 GAGATTGCAGTCTCTCGGCC 60.530 60.000 26.93 4.96 41.12 6.13
106 111 1.838913 GAGCGAGAGATTGCAGTCTC 58.161 55.000 26.94 26.94 43.95 3.36
108 113 0.179150 ACGAGCGAGAGATTGCAGTC 60.179 55.000 0.00 0.00 33.09 3.51
109 114 0.179150 GACGAGCGAGAGATTGCAGT 60.179 55.000 0.00 0.00 33.09 4.40
110 115 0.100325 AGACGAGCGAGAGATTGCAG 59.900 55.000 0.00 0.00 33.09 4.41
111 116 0.528017 AAGACGAGCGAGAGATTGCA 59.472 50.000 0.00 0.00 33.09 4.08
112 117 1.322936 CAAAGACGAGCGAGAGATTGC 59.677 52.381 0.00 0.00 33.09 3.56
113 118 1.322936 GCAAAGACGAGCGAGAGATTG 59.677 52.381 0.00 0.00 36.82 2.67
114 119 1.634702 GCAAAGACGAGCGAGAGATT 58.365 50.000 0.00 0.00 0.00 2.40
115 120 0.179124 GGCAAAGACGAGCGAGAGAT 60.179 55.000 0.00 0.00 0.00 2.75
116 121 1.213013 GGCAAAGACGAGCGAGAGA 59.787 57.895 0.00 0.00 0.00 3.10
117 122 2.155194 CGGCAAAGACGAGCGAGAG 61.155 63.158 0.00 0.00 35.20 3.20
118 123 2.126463 CGGCAAAGACGAGCGAGA 60.126 61.111 0.00 0.00 35.20 4.04
178 183 2.415357 CGGCTTGGATTTTTGCGTACAT 60.415 45.455 0.00 0.00 0.00 2.29
181 186 1.466950 CTCGGCTTGGATTTTTGCGTA 59.533 47.619 0.00 0.00 0.00 4.42
313 336 1.154413 CATCGTTTGCACAGCGACC 60.154 57.895 8.32 0.00 37.47 4.79
322 347 2.031560 TCGTTGCCATATCATCGTTTGC 59.968 45.455 0.00 0.00 32.70 3.68
323 348 3.309682 ACTCGTTGCCATATCATCGTTTG 59.690 43.478 0.00 0.00 32.70 2.93
341 366 5.514279 GCCATATCATTTTTCTGGAACTCG 58.486 41.667 0.00 0.00 0.00 4.18
342 367 5.514279 CGCCATATCATTTTTCTGGAACTC 58.486 41.667 0.00 0.00 0.00 3.01
343 368 4.202050 GCGCCATATCATTTTTCTGGAACT 60.202 41.667 0.00 0.00 0.00 3.01
344 369 4.044426 GCGCCATATCATTTTTCTGGAAC 58.956 43.478 0.00 0.00 0.00 3.62
346 371 3.286353 TGCGCCATATCATTTTTCTGGA 58.714 40.909 4.18 0.00 0.00 3.86
347 372 3.635331 CTGCGCCATATCATTTTTCTGG 58.365 45.455 4.18 0.00 0.00 3.86
348 373 3.047796 GCTGCGCCATATCATTTTTCTG 58.952 45.455 4.18 0.00 0.00 3.02
351 376 3.386486 CATGCTGCGCCATATCATTTTT 58.614 40.909 4.18 0.00 0.00 1.94
352 377 2.864882 GCATGCTGCGCCATATCATTTT 60.865 45.455 11.37 0.00 31.71 1.82
353 378 1.336517 GCATGCTGCGCCATATCATTT 60.337 47.619 11.37 0.00 31.71 2.32
354 379 0.242825 GCATGCTGCGCCATATCATT 59.757 50.000 11.37 0.00 31.71 2.57
356 381 3.347168 GCATGCTGCGCCATATCA 58.653 55.556 11.37 0.00 31.71 2.15
365 390 0.740868 TGACCGACTAAGCATGCTGC 60.741 55.000 23.48 10.34 45.46 5.25
366 391 1.002366 GTGACCGACTAAGCATGCTG 58.998 55.000 23.48 12.58 0.00 4.41
367 392 0.608130 TGTGACCGACTAAGCATGCT 59.392 50.000 16.30 16.30 0.00 3.79
369 394 3.181507 CCAAATGTGACCGACTAAGCATG 60.182 47.826 0.00 0.00 0.00 4.06
370 395 3.009723 CCAAATGTGACCGACTAAGCAT 58.990 45.455 0.00 0.00 0.00 3.79
371 396 2.422597 CCAAATGTGACCGACTAAGCA 58.577 47.619 0.00 0.00 0.00 3.91
372 397 1.130561 GCCAAATGTGACCGACTAAGC 59.869 52.381 0.00 0.00 0.00 3.09
373 398 2.422597 TGCCAAATGTGACCGACTAAG 58.577 47.619 0.00 0.00 0.00 2.18
374 399 2.552599 TGCCAAATGTGACCGACTAA 57.447 45.000 0.00 0.00 0.00 2.24
376 401 1.686355 TTTGCCAAATGTGACCGACT 58.314 45.000 0.00 0.00 0.00 4.18
377 402 2.500509 TTTTGCCAAATGTGACCGAC 57.499 45.000 0.00 0.00 0.00 4.79
396 421 4.023291 ACTGTGACCAACTGACCATTTTT 58.977 39.130 0.00 0.00 0.00 1.94
397 422 3.381272 CACTGTGACCAACTGACCATTTT 59.619 43.478 0.32 0.00 0.00 1.82
398 423 2.951642 CACTGTGACCAACTGACCATTT 59.048 45.455 0.32 0.00 0.00 2.32
399 424 2.172505 TCACTGTGACCAACTGACCATT 59.827 45.455 6.36 0.00 0.00 3.16
400 425 1.768275 TCACTGTGACCAACTGACCAT 59.232 47.619 6.36 0.00 0.00 3.55
401 426 1.134521 GTCACTGTGACCAACTGACCA 60.135 52.381 26.50 0.00 41.37 4.02
402 427 1.134521 TGTCACTGTGACCAACTGACC 60.135 52.381 31.58 9.82 46.40 4.02
403 428 2.309528 TGTCACTGTGACCAACTGAC 57.690 50.000 31.58 11.00 46.40 3.51
404 429 2.236146 AGTTGTCACTGTGACCAACTGA 59.764 45.455 32.96 18.84 46.40 3.41
405 430 2.352651 CAGTTGTCACTGTGACCAACTG 59.647 50.000 36.62 36.62 46.40 3.16
406 431 2.632377 CAGTTGTCACTGTGACCAACT 58.368 47.619 30.76 30.76 46.40 3.16
416 441 3.270877 GTTCAGGTTGTCAGTTGTCACT 58.729 45.455 0.00 0.00 0.00 3.41
417 442 2.354821 GGTTCAGGTTGTCAGTTGTCAC 59.645 50.000 0.00 0.00 0.00 3.67
418 443 2.238646 AGGTTCAGGTTGTCAGTTGTCA 59.761 45.455 0.00 0.00 0.00 3.58
419 444 2.872858 GAGGTTCAGGTTGTCAGTTGTC 59.127 50.000 0.00 0.00 0.00 3.18
420 445 2.741878 CGAGGTTCAGGTTGTCAGTTGT 60.742 50.000 0.00 0.00 0.00 3.32
421 446 1.867233 CGAGGTTCAGGTTGTCAGTTG 59.133 52.381 0.00 0.00 0.00 3.16
422 447 1.810412 GCGAGGTTCAGGTTGTCAGTT 60.810 52.381 0.00 0.00 0.00 3.16
423 448 0.249911 GCGAGGTTCAGGTTGTCAGT 60.250 55.000 0.00 0.00 0.00 3.41
424 449 1.284982 CGCGAGGTTCAGGTTGTCAG 61.285 60.000 0.00 0.00 0.00 3.51
425 450 1.300620 CGCGAGGTTCAGGTTGTCA 60.301 57.895 0.00 0.00 0.00 3.58
426 451 3.550656 CGCGAGGTTCAGGTTGTC 58.449 61.111 0.00 0.00 0.00 3.18
438 463 1.287425 GTTTTGGATCTACCCGCGAG 58.713 55.000 8.23 0.00 38.00 5.03
439 464 0.458889 CGTTTTGGATCTACCCGCGA 60.459 55.000 8.23 0.00 38.00 5.87
440 465 0.738412 ACGTTTTGGATCTACCCGCG 60.738 55.000 0.00 0.00 38.00 6.46
441 466 2.298411 TACGTTTTGGATCTACCCGC 57.702 50.000 0.00 0.00 38.00 6.13
442 467 4.741676 GTGTATACGTTTTGGATCTACCCG 59.258 45.833 0.00 0.00 38.00 5.28
459 484 3.829026 CTGAGCTCCATAGGCTGTGTATA 59.171 47.826 12.15 0.00 40.40 1.47
460 485 2.632028 CTGAGCTCCATAGGCTGTGTAT 59.368 50.000 12.15 0.00 40.40 2.29
496 526 3.654143 ATGTCCAGCCAGCAGCCA 61.654 61.111 0.00 0.00 45.47 4.75
555 585 0.898320 CTCCACCTCGTTCTCCACAT 59.102 55.000 0.00 0.00 0.00 3.21
564 594 3.626924 GCACCACCTCCACCTCGT 61.627 66.667 0.00 0.00 0.00 4.18
666 709 3.060602 GTTGTCTCTCTGTTGGCTGTAC 58.939 50.000 0.00 0.00 0.00 2.90
667 710 2.288213 CGTTGTCTCTCTGTTGGCTGTA 60.288 50.000 0.00 0.00 0.00 2.74
668 711 1.539065 CGTTGTCTCTCTGTTGGCTGT 60.539 52.381 0.00 0.00 0.00 4.40
669 712 1.143305 CGTTGTCTCTCTGTTGGCTG 58.857 55.000 0.00 0.00 0.00 4.85
670 713 1.040646 TCGTTGTCTCTCTGTTGGCT 58.959 50.000 0.00 0.00 0.00 4.75
671 714 1.865865 TTCGTTGTCTCTCTGTTGGC 58.134 50.000 0.00 0.00 0.00 4.52
721 764 3.804193 GAAAGGAAGCAGCGCCCG 61.804 66.667 2.29 0.00 0.00 6.13
786 829 0.898789 GAGACGGGTTGGAGAGTGGA 60.899 60.000 0.00 0.00 0.00 4.02
838 881 3.129913 GATGCGTCAATGCCTGCCC 62.130 63.158 0.00 0.00 0.00 5.36
842 885 2.117156 GCTGGATGCGTCAATGCCT 61.117 57.895 8.47 0.00 0.00 4.75
881 924 2.418746 CGGCTAGCTCAACTGTGGTTAT 60.419 50.000 15.72 0.00 33.88 1.89
901 947 2.577112 CTGCTCGAGGTGTACGCG 60.577 66.667 15.58 3.53 44.16 6.01
1017 1071 1.684049 AAGCGGACAGAGAGGAGGG 60.684 63.158 0.00 0.00 0.00 4.30
1043 1103 2.094700 GTGCATGGATGATGATCATGGC 60.095 50.000 14.30 11.05 37.20 4.40
1082 1142 1.071128 GCCAGGAGCTAGGATGCTG 59.929 63.158 0.00 0.00 44.17 4.41
1126 1186 9.542462 TGGTTAGAGTTCTAATGTATTGTATGC 57.458 33.333 5.01 0.00 40.20 3.14
1159 1219 1.821241 CGCTCGTTGTGGTGTCTGTG 61.821 60.000 0.00 0.00 0.00 3.66
1181 1241 3.000727 CGAATATATGCGGGAAAGGGAC 58.999 50.000 5.07 0.00 0.00 4.46
1242 1302 3.171828 TTTGCGGCCTCTCAACGGA 62.172 57.895 0.00 0.00 0.00 4.69
1246 1306 1.227704 TTCGTTTGCGGCCTCTCAA 60.228 52.632 0.00 0.00 38.89 3.02
1247 1307 1.959226 GTTCGTTTGCGGCCTCTCA 60.959 57.895 0.00 0.00 38.89 3.27
1295 1355 1.748591 GCTGCTAGCTACCCAATTGCT 60.749 52.381 17.23 0.00 42.45 3.91
1298 1358 0.815615 GCGCTGCTAGCTACCCAATT 60.816 55.000 17.23 0.00 39.60 2.32
1299 1359 1.227674 GCGCTGCTAGCTACCCAAT 60.228 57.895 17.23 0.00 39.60 3.16
1507 1575 5.903810 AGGGTGAGTAACTAAATCATCGTC 58.096 41.667 0.00 0.00 0.00 4.20
1514 1582 6.783708 CTCAGAGAGGGTGAGTAACTAAAT 57.216 41.667 0.00 0.00 37.29 1.40
1537 1605 4.099113 AGGCCGTGGTTAGAATCTTACTAC 59.901 45.833 5.94 5.94 0.00 2.73
1540 1608 3.538634 AGGCCGTGGTTAGAATCTTAC 57.461 47.619 0.00 0.00 0.00 2.34
1541 1609 4.539726 TCTAGGCCGTGGTTAGAATCTTA 58.460 43.478 0.00 0.00 0.00 2.10
1542 1610 3.371965 TCTAGGCCGTGGTTAGAATCTT 58.628 45.455 0.00 0.00 0.00 2.40
1552 1620 0.389391 AATCGTCATCTAGGCCGTGG 59.611 55.000 0.00 0.00 0.00 4.94
1554 1622 2.035576 GGTTAATCGTCATCTAGGCCGT 59.964 50.000 0.00 0.00 0.00 5.68
1558 1626 5.263968 ACACAGGTTAATCGTCATCTAGG 57.736 43.478 0.00 0.00 0.00 3.02
1561 1629 6.590292 CACTAAACACAGGTTAATCGTCATCT 59.410 38.462 0.00 0.00 35.82 2.90
1562 1630 6.183360 CCACTAAACACAGGTTAATCGTCATC 60.183 42.308 0.00 0.00 35.82 2.92
1564 1632 4.992319 CCACTAAACACAGGTTAATCGTCA 59.008 41.667 0.00 0.00 35.82 4.35
1565 1633 4.142966 GCCACTAAACACAGGTTAATCGTC 60.143 45.833 0.00 0.00 35.82 4.20
1566 1634 3.749609 GCCACTAAACACAGGTTAATCGT 59.250 43.478 0.00 0.00 35.82 3.73
1567 1635 4.000988 AGCCACTAAACACAGGTTAATCG 58.999 43.478 0.00 0.00 35.82 3.34
1568 1636 4.156008 CCAGCCACTAAACACAGGTTAATC 59.844 45.833 0.00 0.00 35.82 1.75
1570 1638 3.482436 CCAGCCACTAAACACAGGTTAA 58.518 45.455 0.00 0.00 35.82 2.01
1571 1639 2.224670 CCCAGCCACTAAACACAGGTTA 60.225 50.000 0.00 0.00 35.82 2.85
1573 1641 0.110486 CCCAGCCACTAAACACAGGT 59.890 55.000 0.00 0.00 0.00 4.00
1574 1642 0.400213 TCCCAGCCACTAAACACAGG 59.600 55.000 0.00 0.00 0.00 4.00
1576 1644 4.076394 GTTTATCCCAGCCACTAAACACA 58.924 43.478 0.00 0.00 35.28 3.72
1577 1645 3.126343 CGTTTATCCCAGCCACTAAACAC 59.874 47.826 0.00 0.00 35.02 3.32
1578 1646 3.340034 CGTTTATCCCAGCCACTAAACA 58.660 45.455 0.00 0.00 35.02 2.83
1579 1647 2.681344 CCGTTTATCCCAGCCACTAAAC 59.319 50.000 0.00 0.00 33.04 2.01
1598 1676 2.311463 TGAGCTTAGAGATTCCTCCCG 58.689 52.381 0.00 0.00 40.30 5.14
1600 1678 4.953940 ACATGAGCTTAGAGATTCCTCC 57.046 45.455 0.00 0.00 40.30 4.30
1615 1693 1.869754 CGGTTCCATCCGCTACATGAG 60.870 57.143 0.00 0.00 43.96 2.90
1627 1705 2.529780 TTTCACACGTACGGTTCCAT 57.470 45.000 21.06 0.00 0.00 3.41
1628 1706 2.306341 TTTTCACACGTACGGTTCCA 57.694 45.000 21.06 0.00 0.00 3.53
1630 1708 6.291479 GCTAGATATTTTCACACGTACGGTTC 60.291 42.308 21.06 7.18 0.00 3.62
1631 1709 5.517770 GCTAGATATTTTCACACGTACGGTT 59.482 40.000 21.06 2.20 0.00 4.44
1632 1710 5.039333 GCTAGATATTTTCACACGTACGGT 58.961 41.667 21.06 11.73 0.00 4.83
1633 1711 5.038683 TGCTAGATATTTTCACACGTACGG 58.961 41.667 21.06 11.05 0.00 4.02
1634 1712 5.742453 ACTGCTAGATATTTTCACACGTACG 59.258 40.000 15.01 15.01 0.00 3.67
1635 1713 8.624701 TTACTGCTAGATATTTTCACACGTAC 57.375 34.615 0.00 0.00 0.00 3.67
1637 1715 9.982651 ATATTACTGCTAGATATTTTCACACGT 57.017 29.630 0.00 0.00 0.00 4.49
1661 1774 4.279922 TCACGCATCTTTCTTCGGGATATA 59.720 41.667 0.00 0.00 28.54 0.86
1662 1775 3.069586 TCACGCATCTTTCTTCGGGATAT 59.930 43.478 0.00 0.00 28.54 1.63
1664 1777 1.207089 TCACGCATCTTTCTTCGGGAT 59.793 47.619 0.00 0.00 28.54 3.85
1665 1778 0.606096 TCACGCATCTTTCTTCGGGA 59.394 50.000 0.00 0.00 31.36 5.14
1666 1779 1.656652 ATCACGCATCTTTCTTCGGG 58.343 50.000 0.00 0.00 0.00 5.14
1667 1780 2.789092 GCAATCACGCATCTTTCTTCGG 60.789 50.000 0.00 0.00 0.00 4.30
1668 1781 2.434761 GCAATCACGCATCTTTCTTCG 58.565 47.619 0.00 0.00 0.00 3.79
1669 1782 2.421424 AGGCAATCACGCATCTTTCTTC 59.579 45.455 0.00 0.00 0.00 2.87
1671 1784 2.119801 AGGCAATCACGCATCTTTCT 57.880 45.000 0.00 0.00 0.00 2.52
1673 1786 3.544684 TGATAGGCAATCACGCATCTTT 58.455 40.909 0.00 0.00 39.77 2.52
1674 1787 3.198409 TGATAGGCAATCACGCATCTT 57.802 42.857 0.00 0.00 39.77 2.40
1675 1788 2.916702 TGATAGGCAATCACGCATCT 57.083 45.000 0.00 0.00 39.77 2.90
1683 1796 5.851720 TCTGACTCTGAATGATAGGCAATC 58.148 41.667 0.00 0.00 34.93 2.67
1687 1800 3.894427 TCCTCTGACTCTGAATGATAGGC 59.106 47.826 0.00 0.00 0.00 3.93
1688 1801 5.384336 TCTCCTCTGACTCTGAATGATAGG 58.616 45.833 0.00 0.00 0.00 2.57
1689 1802 6.957920 TTCTCCTCTGACTCTGAATGATAG 57.042 41.667 0.00 0.00 0.00 2.08
1690 1803 9.022884 CATATTCTCCTCTGACTCTGAATGATA 57.977 37.037 0.00 0.00 0.00 2.15
1691 1804 7.510001 ACATATTCTCCTCTGACTCTGAATGAT 59.490 37.037 0.00 0.00 0.00 2.45
1692 1805 6.838090 ACATATTCTCCTCTGACTCTGAATGA 59.162 38.462 0.00 0.00 0.00 2.57
1693 1806 6.924612 CACATATTCTCCTCTGACTCTGAATG 59.075 42.308 0.00 0.00 0.00 2.67
1694 1807 6.462768 GCACATATTCTCCTCTGACTCTGAAT 60.463 42.308 0.00 0.00 0.00 2.57
1695 1808 5.163468 GCACATATTCTCCTCTGACTCTGAA 60.163 44.000 0.00 0.00 0.00 3.02
1696 1809 4.340666 GCACATATTCTCCTCTGACTCTGA 59.659 45.833 0.00 0.00 0.00 3.27
1697 1810 4.099113 TGCACATATTCTCCTCTGACTCTG 59.901 45.833 0.00 0.00 0.00 3.35
1698 1811 4.285020 TGCACATATTCTCCTCTGACTCT 58.715 43.478 0.00 0.00 0.00 3.24
1699 1812 4.501229 CCTGCACATATTCTCCTCTGACTC 60.501 50.000 0.00 0.00 0.00 3.36
1700 1813 3.387374 CCTGCACATATTCTCCTCTGACT 59.613 47.826 0.00 0.00 0.00 3.41
1701 1814 3.726607 CCTGCACATATTCTCCTCTGAC 58.273 50.000 0.00 0.00 0.00 3.51
1702 1815 2.103771 GCCTGCACATATTCTCCTCTGA 59.896 50.000 0.00 0.00 0.00 3.27
1703 1816 2.158856 TGCCTGCACATATTCTCCTCTG 60.159 50.000 0.00 0.00 0.00 3.35
1704 1817 2.121948 TGCCTGCACATATTCTCCTCT 58.878 47.619 0.00 0.00 0.00 3.69
1705 1818 2.627515 TGCCTGCACATATTCTCCTC 57.372 50.000 0.00 0.00 0.00 3.71
1706 1819 3.370840 TTTGCCTGCACATATTCTCCT 57.629 42.857 0.00 0.00 0.00 3.69
1707 1820 4.427312 CTTTTTGCCTGCACATATTCTCC 58.573 43.478 0.00 0.00 0.00 3.71
1721 1834 2.256306 TCCCATCCTTTCCTTTTTGCC 58.744 47.619 0.00 0.00 0.00 4.52
1748 1861 5.307926 GAAGGATCTTCTTTCCAAGCAAG 57.692 43.478 0.00 0.00 35.59 4.01
1770 1883 8.041323 TCTAAATTCTGTGTAAAGCTAGGAAGG 58.959 37.037 0.00 0.00 0.00 3.46
1771 1884 9.092876 CTCTAAATTCTGTGTAAAGCTAGGAAG 57.907 37.037 0.00 0.00 0.00 3.46
1772 1885 8.041323 CCTCTAAATTCTGTGTAAAGCTAGGAA 58.959 37.037 0.00 0.00 0.00 3.36
1773 1886 7.180408 ACCTCTAAATTCTGTGTAAAGCTAGGA 59.820 37.037 0.00 0.00 0.00 2.94
1871 1991 0.954452 AACCAAGTTGCTGCTGCTAC 59.046 50.000 19.46 19.46 43.42 3.58
1872 1992 0.953727 CAACCAAGTTGCTGCTGCTA 59.046 50.000 17.00 6.36 36.73 3.49
1874 1994 4.331356 CAACCAAGTTGCTGCTGC 57.669 55.556 8.89 8.89 36.73 5.25
1889 2009 1.270826 CTCCTCTTCTCTGTCGTGCAA 59.729 52.381 0.00 0.00 0.00 4.08
1890 2010 0.884514 CTCCTCTTCTCTGTCGTGCA 59.115 55.000 0.00 0.00 0.00 4.57
1913 2036 1.464734 GGCTTCCTTTGCTTAGTCCC 58.535 55.000 0.00 0.00 0.00 4.46
1927 2050 1.811941 CGGAGGATTGCTTAGGGCTTC 60.812 57.143 0.00 0.00 42.39 3.86
1947 2070 6.549912 AAAAATCTGTACGTAGTTTGGGTC 57.450 37.500 0.00 0.00 37.78 4.46
1949 2072 9.902196 ATTTTAAAAATCTGTACGTAGTTTGGG 57.098 29.630 4.44 0.00 37.78 4.12
1973 2484 7.736447 GCTTGGAGCAAGTACATAATCTATT 57.264 36.000 0.00 0.00 42.77 1.73
1993 2504 7.011189 GCAAAACTGCTAATTAATTGTGCTTG 58.989 34.615 20.72 17.78 0.00 4.01
1998 2509 9.626045 GTTCTAGCAAAACTGCTAATTAATTGT 57.374 29.630 11.05 0.00 45.46 2.71
2042 2553 9.860898 GCTATAAAAGATGAATGAAACCAAACT 57.139 29.630 0.00 0.00 0.00 2.66
2045 2556 8.359875 TGGCTATAAAAGATGAATGAAACCAA 57.640 30.769 0.00 0.00 0.00 3.67
2046 2557 7.953005 TGGCTATAAAAGATGAATGAAACCA 57.047 32.000 0.00 0.00 0.00 3.67
2066 2577 9.887629 CATCTTATAGAATCACATCTAATGGCT 57.112 33.333 0.00 0.00 35.64 4.75
2067 2578 8.610896 GCATCTTATAGAATCACATCTAATGGC 58.389 37.037 0.00 0.00 35.64 4.40
2068 2579 8.815189 CGCATCTTATAGAATCACATCTAATGG 58.185 37.037 0.00 0.00 35.64 3.16
2069 2580 9.363763 ACGCATCTTATAGAATCACATCTAATG 57.636 33.333 0.00 0.00 35.64 1.90
2071 2582 8.360390 ACACGCATCTTATAGAATCACATCTAA 58.640 33.333 0.00 0.00 35.64 2.10
2072 2583 7.809806 CACACGCATCTTATAGAATCACATCTA 59.190 37.037 0.00 0.00 36.41 1.98
2073 2584 6.644181 CACACGCATCTTATAGAATCACATCT 59.356 38.462 0.00 0.00 0.00 2.90
2074 2585 6.422100 ACACACGCATCTTATAGAATCACATC 59.578 38.462 0.00 0.00 0.00 3.06
2075 2586 6.201615 CACACACGCATCTTATAGAATCACAT 59.798 38.462 0.00 0.00 0.00 3.21
2077 2588 5.557136 GCACACACGCATCTTATAGAATCAC 60.557 44.000 0.00 0.00 0.00 3.06
2078 2589 4.507756 GCACACACGCATCTTATAGAATCA 59.492 41.667 0.00 0.00 0.00 2.57
2079 2590 4.747108 AGCACACACGCATCTTATAGAATC 59.253 41.667 0.00 0.00 0.00 2.52
2080 2591 4.509230 CAGCACACACGCATCTTATAGAAT 59.491 41.667 0.00 0.00 0.00 2.40
2081 2592 3.865164 CAGCACACACGCATCTTATAGAA 59.135 43.478 0.00 0.00 0.00 2.10
2082 2593 3.130340 TCAGCACACACGCATCTTATAGA 59.870 43.478 0.00 0.00 0.00 1.98
2083 2594 3.243877 GTCAGCACACACGCATCTTATAG 59.756 47.826 0.00 0.00 0.00 1.31
2084 2595 3.186909 GTCAGCACACACGCATCTTATA 58.813 45.455 0.00 0.00 0.00 0.98
2086 2597 1.428448 GTCAGCACACACGCATCTTA 58.572 50.000 0.00 0.00 0.00 2.10
2087 2598 1.560004 CGTCAGCACACACGCATCTT 61.560 55.000 0.00 0.00 0.00 2.40
2088 2599 2.023771 CGTCAGCACACACGCATCT 61.024 57.895 0.00 0.00 0.00 2.90
2089 2600 2.310233 ACGTCAGCACACACGCATC 61.310 57.895 0.00 0.00 39.73 3.91
2090 2601 2.280119 ACGTCAGCACACACGCAT 60.280 55.556 0.00 0.00 39.73 4.73
2091 2602 3.261216 CACGTCAGCACACACGCA 61.261 61.111 0.00 0.00 39.73 5.24
2092 2603 4.000557 CCACGTCAGCACACACGC 62.001 66.667 0.00 0.00 39.73 5.34
2093 2604 3.337889 CCCACGTCAGCACACACG 61.338 66.667 0.00 0.00 41.90 4.49
2096 2607 0.531090 TACAACCCACGTCAGCACAC 60.531 55.000 0.00 0.00 0.00 3.82
2097 2608 0.394938 ATACAACCCACGTCAGCACA 59.605 50.000 0.00 0.00 0.00 4.57
2098 2609 1.076332 GATACAACCCACGTCAGCAC 58.924 55.000 0.00 0.00 0.00 4.40
2099 2610 0.973632 AGATACAACCCACGTCAGCA 59.026 50.000 0.00 0.00 0.00 4.41
2100 2611 1.337823 ACAGATACAACCCACGTCAGC 60.338 52.381 0.00 0.00 0.00 4.26
2101 2612 2.743636 ACAGATACAACCCACGTCAG 57.256 50.000 0.00 0.00 0.00 3.51
2102 2613 3.478857 AAACAGATACAACCCACGTCA 57.521 42.857 0.00 0.00 0.00 4.35
2103 2614 4.035909 ACAAAAACAGATACAACCCACGTC 59.964 41.667 0.00 0.00 0.00 4.34
2104 2615 3.949113 ACAAAAACAGATACAACCCACGT 59.051 39.130 0.00 0.00 0.00 4.49
2105 2616 4.561735 ACAAAAACAGATACAACCCACG 57.438 40.909 0.00 0.00 0.00 4.94
2107 2618 6.936279 TGAAAACAAAAACAGATACAACCCA 58.064 32.000 0.00 0.00 0.00 4.51
2108 2619 7.762159 TCTTGAAAACAAAAACAGATACAACCC 59.238 33.333 0.00 0.00 0.00 4.11
2109 2620 8.696410 TCTTGAAAACAAAAACAGATACAACC 57.304 30.769 0.00 0.00 0.00 3.77
2115 2626 9.820725 TCATTCATCTTGAAAACAAAAACAGAT 57.179 25.926 0.00 0.00 40.12 2.90
2117 2628 9.304731 TCTCATTCATCTTGAAAACAAAAACAG 57.695 29.630 0.00 0.00 40.12 3.16
2118 2629 9.086336 GTCTCATTCATCTTGAAAACAAAAACA 57.914 29.630 0.00 0.00 40.12 2.83
2120 2631 8.256605 TGGTCTCATTCATCTTGAAAACAAAAA 58.743 29.630 0.00 0.00 40.12 1.94
2121 2632 7.780064 TGGTCTCATTCATCTTGAAAACAAAA 58.220 30.769 0.00 0.00 40.12 2.44
2122 2633 7.345422 TGGTCTCATTCATCTTGAAAACAAA 57.655 32.000 0.00 0.00 40.12 2.83
2123 2634 6.957920 TGGTCTCATTCATCTTGAAAACAA 57.042 33.333 0.00 0.00 40.12 2.83
2124 2635 6.957920 TTGGTCTCATTCATCTTGAAAACA 57.042 33.333 0.00 0.00 40.12 2.83
2125 2636 8.822652 AATTTGGTCTCATTCATCTTGAAAAC 57.177 30.769 0.00 0.00 40.12 2.43
2243 2754 8.100791 AGGCTTATTGTTGTATGACTCTGTAAA 58.899 33.333 0.00 0.00 0.00 2.01
2293 2804 2.958818 ACTGGATAGGGATAGCGACAA 58.041 47.619 0.00 0.00 0.00 3.18
2321 2832 1.302832 CCAAGACTTTCAGCGCCCT 60.303 57.895 2.29 0.00 0.00 5.19
2423 2934 0.108424 AGAAGCACGCCAGACTGATC 60.108 55.000 3.32 0.00 0.00 2.92
2478 2989 0.632835 ATGGATTGATGGCAGGTGGT 59.367 50.000 0.00 0.00 0.00 4.16
2790 3301 1.003118 CAACCTGATCGGGAAGTTCCA 59.997 52.381 27.90 4.21 38.64 3.53
2818 3329 0.821301 TGGAGGCATCGTTGTTGCAA 60.821 50.000 0.00 0.00 41.95 4.08
2825 3336 0.909610 TCCCTTCTGGAGGCATCGTT 60.910 55.000 0.00 0.00 44.85 3.85
2871 3382 2.031012 CTGACTGCGGTCTTGGCA 59.969 61.111 25.54 5.55 42.54 4.92
2932 3445 2.031465 GGTTCCGCTCGGTTCCAA 59.969 61.111 8.28 0.00 36.47 3.53
3443 3957 5.923204 AGTGCCTAGAACTCATTTAGATGG 58.077 41.667 0.00 0.00 33.93 3.51
3444 3958 5.988561 GGAGTGCCTAGAACTCATTTAGATG 59.011 44.000 20.54 0.00 44.86 2.90
3445 3959 5.071115 GGGAGTGCCTAGAACTCATTTAGAT 59.929 44.000 20.54 0.00 44.86 1.98
3446 3960 4.406003 GGGAGTGCCTAGAACTCATTTAGA 59.594 45.833 20.54 0.00 44.86 2.10
3447 3961 4.162320 TGGGAGTGCCTAGAACTCATTTAG 59.838 45.833 20.54 0.00 44.86 1.85
3448 3962 4.101114 TGGGAGTGCCTAGAACTCATTTA 58.899 43.478 20.54 6.88 44.86 1.40
3449 3963 2.912956 TGGGAGTGCCTAGAACTCATTT 59.087 45.455 20.54 0.00 44.86 2.32
3450 3964 2.551270 TGGGAGTGCCTAGAACTCATT 58.449 47.619 20.54 0.25 44.86 2.57
3451 3965 2.254152 TGGGAGTGCCTAGAACTCAT 57.746 50.000 20.54 0.00 44.86 2.90
3452 3966 2.254152 ATGGGAGTGCCTAGAACTCA 57.746 50.000 20.54 8.03 44.86 3.41
3453 3967 3.707102 ACTAATGGGAGTGCCTAGAACTC 59.293 47.826 14.10 14.10 42.79 3.01
3454 3968 3.725634 ACTAATGGGAGTGCCTAGAACT 58.274 45.455 1.06 0.00 0.00 3.01
3455 3969 4.489306 AACTAATGGGAGTGCCTAGAAC 57.511 45.455 1.06 0.00 0.00 3.01
3456 3970 4.654262 CCTAACTAATGGGAGTGCCTAGAA 59.346 45.833 1.06 0.00 0.00 2.10
3457 3971 4.223953 CCTAACTAATGGGAGTGCCTAGA 58.776 47.826 1.06 0.00 0.00 2.43
3458 3972 3.325135 CCCTAACTAATGGGAGTGCCTAG 59.675 52.174 1.06 0.00 46.15 3.02
3459 3973 3.314693 CCCTAACTAATGGGAGTGCCTA 58.685 50.000 1.06 0.00 46.15 3.93
3460 3974 2.127708 CCCTAACTAATGGGAGTGCCT 58.872 52.381 1.06 0.00 46.15 4.75
3461 3975 1.477014 GCCCTAACTAATGGGAGTGCC 60.477 57.143 1.75 0.00 46.15 5.01
3462 3976 1.211949 TGCCCTAACTAATGGGAGTGC 59.788 52.381 1.75 0.00 46.15 4.40
3463 3977 3.864789 ATGCCCTAACTAATGGGAGTG 57.135 47.619 1.75 0.00 46.15 3.51
3464 3978 4.881157 AAATGCCCTAACTAATGGGAGT 57.119 40.909 1.75 0.00 46.15 3.85
3465 3979 5.422012 ACAAAAATGCCCTAACTAATGGGAG 59.578 40.000 1.75 0.00 46.15 4.30
3466 3980 5.337788 ACAAAAATGCCCTAACTAATGGGA 58.662 37.500 1.75 0.00 46.15 4.37
3467 3981 5.675684 ACAAAAATGCCCTAACTAATGGG 57.324 39.130 0.00 0.00 46.00 4.00
3468 3982 9.665719 AATTAACAAAAATGCCCTAACTAATGG 57.334 29.630 0.00 0.00 0.00 3.16
3471 3985 9.863845 GCTAATTAACAAAAATGCCCTAACTAA 57.136 29.630 0.00 0.00 0.00 2.24
3472 3986 8.185505 CGCTAATTAACAAAAATGCCCTAACTA 58.814 33.333 0.00 0.00 0.00 2.24
3473 3987 7.033185 CGCTAATTAACAAAAATGCCCTAACT 58.967 34.615 0.00 0.00 0.00 2.24
3474 3988 7.030768 TCGCTAATTAACAAAAATGCCCTAAC 58.969 34.615 0.00 0.00 0.00 2.34
3475 3989 7.159322 TCGCTAATTAACAAAAATGCCCTAA 57.841 32.000 0.00 0.00 0.00 2.69
3476 3990 6.761099 TCGCTAATTAACAAAAATGCCCTA 57.239 33.333 0.00 0.00 0.00 3.53
3477 3991 5.652994 TCGCTAATTAACAAAAATGCCCT 57.347 34.783 0.00 0.00 0.00 5.19
3478 3992 7.422399 TCTATCGCTAATTAACAAAAATGCCC 58.578 34.615 0.00 0.00 0.00 5.36
3491 4005 9.814899 CTTCATCAGGATTATCTATCGCTAATT 57.185 33.333 0.00 0.00 33.82 1.40
3519 4033 5.096443 AGGAAAGAGAGACATGTGGAATC 57.904 43.478 1.15 0.00 0.00 2.52
3524 4038 4.457257 GGGAAAAGGAAAGAGAGACATGTG 59.543 45.833 1.15 0.00 0.00 3.21
3527 4041 5.073691 TGAAGGGAAAAGGAAAGAGAGACAT 59.926 40.000 0.00 0.00 0.00 3.06
3553 4067 6.417258 TGAATGATACTGGCAAAGAGATTGA 58.583 36.000 0.00 0.00 41.85 2.57
3568 4082 6.258160 AGCAAAGCGTACAAATGAATGATAC 58.742 36.000 0.00 0.00 0.00 2.24
3569 4083 6.435430 AGCAAAGCGTACAAATGAATGATA 57.565 33.333 0.00 0.00 0.00 2.15
3570 4084 5.314923 AGCAAAGCGTACAAATGAATGAT 57.685 34.783 0.00 0.00 0.00 2.45
3571 4085 4.764679 AGCAAAGCGTACAAATGAATGA 57.235 36.364 0.00 0.00 0.00 2.57
3572 4086 5.601582 CAAAGCAAAGCGTACAAATGAATG 58.398 37.500 0.00 0.00 0.00 2.67
3573 4087 4.150451 GCAAAGCAAAGCGTACAAATGAAT 59.850 37.500 0.00 0.00 0.00 2.57
3574 4088 3.489047 GCAAAGCAAAGCGTACAAATGAA 59.511 39.130 0.00 0.00 0.00 2.57
3626 4140 7.912056 AAAGAGCAAAGCTTTTTCTCTTTTT 57.088 28.000 33.90 24.51 46.09 1.94
3629 4143 6.401394 ACAAAAGAGCAAAGCTTTTTCTCTT 58.599 32.000 29.71 29.71 41.08 2.85
3630 4144 5.970592 ACAAAAGAGCAAAGCTTTTTCTCT 58.029 33.333 24.49 24.49 41.08 3.10
3631 4145 6.653273 AACAAAAGAGCAAAGCTTTTTCTC 57.347 33.333 21.85 21.85 41.08 2.87
3632 4146 7.439157 AAAACAAAAGAGCAAAGCTTTTTCT 57.561 28.000 9.53 12.57 41.08 2.52
3633 4147 7.271223 GGAAAAACAAAAGAGCAAAGCTTTTTC 59.729 33.333 9.53 10.42 41.08 2.29
3634 4148 7.083858 GGAAAAACAAAAGAGCAAAGCTTTTT 58.916 30.769 9.53 0.18 43.19 1.94
3635 4149 6.206438 TGGAAAAACAAAAGAGCAAAGCTTTT 59.794 30.769 9.53 0.00 44.04 2.27
3636 4150 5.704978 TGGAAAAACAAAAGAGCAAAGCTTT 59.295 32.000 5.69 5.69 39.88 3.51
3637 4151 5.122239 GTGGAAAAACAAAAGAGCAAAGCTT 59.878 36.000 0.00 0.00 39.88 3.74
3638 4152 4.631377 GTGGAAAAACAAAAGAGCAAAGCT 59.369 37.500 0.00 0.00 43.88 3.74
3661 4175 3.030652 GGCCGGCCGATATGTTTG 58.969 61.111 33.60 8.26 0.00 2.93
3711 4234 3.857854 CGCACGCACATGGCTCTC 61.858 66.667 0.00 0.00 41.67 3.20
3716 4239 3.043713 ACAGTCGCACGCACATGG 61.044 61.111 0.00 0.00 0.00 3.66
3717 4240 2.171701 CACAGTCGCACGCACATG 59.828 61.111 0.00 0.00 0.00 3.21
3720 4243 3.635734 GATGCACAGTCGCACGCAC 62.636 63.158 0.00 0.00 46.56 5.34
3721 4244 3.413861 GATGCACAGTCGCACGCA 61.414 61.111 0.00 0.00 46.56 5.24
3722 4245 4.152625 GGATGCACAGTCGCACGC 62.153 66.667 0.00 0.00 46.56 5.34
3723 4246 2.433145 AGGATGCACAGTCGCACG 60.433 61.111 0.00 0.00 46.56 5.34
3743 4266 4.635223 TGCATGAGTAGTCATAGGATTGC 58.365 43.478 12.74 12.65 41.85 3.56
3939 4468 6.930722 TGCATACATACATTCATAGAGTGGTG 59.069 38.462 0.00 0.00 0.00 4.17
3951 4480 3.700539 TGCCAAAGCTGCATACATACATT 59.299 39.130 1.02 0.00 40.80 2.71
3979 4508 1.741706 CGCTGCTGATCCATCAAAAGT 59.258 47.619 0.00 0.00 36.18 2.66
3984 4513 2.203112 GCCGCTGCTGATCCATCA 60.203 61.111 0.00 0.00 35.16 3.07
3999 4533 0.521735 GGATTGAGTGTTGAACGGCC 59.478 55.000 0.00 0.00 0.00 6.13
4001 4535 2.673368 GCTAGGATTGAGTGTTGAACGG 59.327 50.000 0.00 0.00 0.00 4.44
4012 4552 2.355716 CCCTTTCAACGGCTAGGATTGA 60.356 50.000 0.00 0.00 0.00 2.57
4037 4577 5.215252 AGCTAGTTTTCACTGCTTAGTCA 57.785 39.130 0.00 0.00 35.24 3.41
4040 4580 5.171476 TGCTAGCTAGTTTTCACTGCTTAG 58.829 41.667 21.62 0.00 38.01 2.18
4054 4594 2.076863 ACAAAACGGCTTGCTAGCTAG 58.923 47.619 20.17 20.17 46.90 3.42
4058 4598 2.218530 GCAAAACAAAACGGCTTGCTAG 59.781 45.455 0.00 0.00 39.39 3.42
4133 4755 4.325028 TGACTAACGACCAGCAAACTAA 57.675 40.909 0.00 0.00 0.00 2.24
4175 4798 8.909923 CCGGTTGACCTCCTATATTTTTAAATT 58.090 33.333 0.00 0.00 0.00 1.82
4176 4799 7.504574 CCCGGTTGACCTCCTATATTTTTAAAT 59.495 37.037 0.00 0.00 0.00 1.40
4177 4800 6.829811 CCCGGTTGACCTCCTATATTTTTAAA 59.170 38.462 0.00 0.00 0.00 1.52
4178 4801 6.358991 CCCGGTTGACCTCCTATATTTTTAA 58.641 40.000 0.00 0.00 0.00 1.52
4265 4888 2.963432 TGACCGAATTAAGACCGTTCC 58.037 47.619 0.00 0.00 0.00 3.62
4333 4957 1.783140 GAGCGAAAACGACGTGTTACT 59.217 47.619 2.74 4.53 40.84 2.24
4652 5325 1.832219 CCATCCCTCTCCATCGCAA 59.168 57.895 0.00 0.00 0.00 4.85
5067 5743 0.532573 TCCAGAGCACGATCTTCACC 59.467 55.000 0.00 0.00 0.00 4.02
5070 5746 1.863267 CCATCCAGAGCACGATCTTC 58.137 55.000 0.00 0.00 0.00 2.87
5151 5827 3.484229 CGCGAGTAAATTTCTGCTTGGAG 60.484 47.826 0.00 0.00 0.00 3.86
5152 5828 2.415168 CGCGAGTAAATTTCTGCTTGGA 59.585 45.455 0.00 0.00 0.00 3.53
5167 5857 5.177696 GGATGAAGATTTAATAAGCGCGAGT 59.822 40.000 12.10 0.00 0.00 4.18
5168 5858 5.177511 TGGATGAAGATTTAATAAGCGCGAG 59.822 40.000 12.10 0.00 0.00 5.03
5169 5859 5.053811 TGGATGAAGATTTAATAAGCGCGA 58.946 37.500 12.10 0.00 0.00 5.87
5170 5860 5.342806 TGGATGAAGATTTAATAAGCGCG 57.657 39.130 0.00 0.00 0.00 6.86
5171 5861 7.358683 GCAATTGGATGAAGATTTAATAAGCGC 60.359 37.037 7.72 0.00 0.00 5.92
5172 5862 7.115378 GGCAATTGGATGAAGATTTAATAAGCG 59.885 37.037 7.72 0.00 0.00 4.68
5173 5863 7.115378 CGGCAATTGGATGAAGATTTAATAAGC 59.885 37.037 7.72 0.00 0.00 3.09
5175 5865 8.006298 ACGGCAATTGGATGAAGATTTAATAA 57.994 30.769 7.72 0.00 0.00 1.40
5183 5873 1.202114 GCAACGGCAATTGGATGAAGA 59.798 47.619 7.72 0.00 40.72 2.87
5190 5880 0.523968 CGATCAGCAACGGCAATTGG 60.524 55.000 7.72 0.00 44.61 3.16
5191 5881 0.447406 TCGATCAGCAACGGCAATTG 59.553 50.000 0.00 0.00 44.61 2.32
5217 5913 7.010460 CCTGAGAAAATTCAGACAAAACAAACC 59.990 37.037 4.67 0.00 45.95 3.27
5222 5918 6.391227 TCCCTGAGAAAATTCAGACAAAAC 57.609 37.500 4.67 0.00 45.95 2.43
5309 6005 5.829924 ACTCAAGAACAAGGTGATCAATGTT 59.170 36.000 17.76 17.76 38.62 2.71
5352 6048 0.750911 GGAGGCAAAGCTGATCAGGG 60.751 60.000 23.89 0.81 0.00 4.45
5353 6049 0.255318 AGGAGGCAAAGCTGATCAGG 59.745 55.000 23.89 8.49 0.00 3.86
5365 6061 4.340617 CAGTTTATTTAACCCAGGAGGCA 58.659 43.478 0.00 0.00 40.58 4.75
5372 6068 2.829120 GCCCTGCAGTTTATTTAACCCA 59.171 45.455 13.81 0.00 37.46 4.51
5382 6078 2.515901 AGGAACGCCCTGCAGTTT 59.484 55.556 13.81 0.00 45.61 2.66
5488 6184 2.040412 AGGAGGAAAAAGGTAGTGGCAG 59.960 50.000 0.00 0.00 0.00 4.85
5568 6269 1.108776 ATGTGGCTGCAACATCCATC 58.891 50.000 16.81 0.00 32.83 3.51
5569 6270 0.821517 CATGTGGCTGCAACATCCAT 59.178 50.000 19.51 0.00 36.10 3.41
5570 6271 1.879737 GCATGTGGCTGCAACATCCA 61.880 55.000 19.51 0.00 41.87 3.41
5571 6272 1.153706 GCATGTGGCTGCAACATCC 60.154 57.895 19.51 7.57 41.87 3.51
5780 6493 1.831736 AGACCAACCATAGAACCGAGG 59.168 52.381 0.00 0.00 0.00 4.63
5831 6544 1.303309 CCGCCTTCACCTGATCATTC 58.697 55.000 0.00 0.00 0.00 2.67
5868 6584 5.512404 GGAACACGATGTATATCCCCATCAA 60.512 44.000 0.00 0.00 37.84 2.57
5903 6619 0.532573 TGTCTCACCTTCTGATCGCC 59.467 55.000 0.00 0.00 0.00 5.54
5956 6672 9.066939 CCGTGTCGAGAGATGAAATAATAATAG 57.933 37.037 0.00 0.00 45.19 1.73
5971 6687 1.444553 GCAACTCCCGTGTCGAGAG 60.445 63.158 0.00 0.00 0.00 3.20
6070 6793 4.314440 TTGAGCCAGTCCGCGCTT 62.314 61.111 5.56 0.00 34.84 4.68
6076 6799 2.456119 CGCGATGTTGAGCCAGTCC 61.456 63.158 0.00 0.00 0.00 3.85
6103 6826 4.521256 AGTATATCACCGAAGAGAGAAGGC 59.479 45.833 0.00 0.00 0.00 4.35
6105 6828 7.972832 AGTAGTATATCACCGAAGAGAGAAG 57.027 40.000 0.00 0.00 0.00 2.85
6106 6829 8.649591 AGTAGTAGTATATCACCGAAGAGAGAA 58.350 37.037 0.00 0.00 0.00 2.87
6133 6856 7.759886 TGCTAAATTGCTACTGTACTGAACTAG 59.240 37.037 6.77 0.00 0.00 2.57
6136 6859 6.590292 TCTGCTAAATTGCTACTGTACTGAAC 59.410 38.462 6.77 0.00 0.00 3.18
6138 6861 6.280855 TCTGCTAAATTGCTACTGTACTGA 57.719 37.500 6.77 0.00 0.00 3.41
6139 6862 5.521735 CCTCTGCTAAATTGCTACTGTACTG 59.478 44.000 0.00 0.00 0.00 2.74
6140 6863 5.422331 TCCTCTGCTAAATTGCTACTGTACT 59.578 40.000 0.00 0.00 0.00 2.73
6141 6864 5.661458 TCCTCTGCTAAATTGCTACTGTAC 58.339 41.667 0.00 0.00 0.00 2.90
6144 6867 4.125703 CCTCCTCTGCTAAATTGCTACTG 58.874 47.826 0.00 0.00 0.00 2.74
6148 6871 1.283029 TGCCTCCTCTGCTAAATTGCT 59.717 47.619 0.00 0.00 0.00 3.91
6150 6873 3.507233 TGTTTGCCTCCTCTGCTAAATTG 59.493 43.478 0.00 0.00 0.00 2.32
6181 6904 6.824305 AGCAAGTACAGCAACTAATTTGAT 57.176 33.333 12.08 0.00 37.39 2.57
6183 6906 7.118390 AGACTAGCAAGTACAGCAACTAATTTG 59.882 37.037 12.08 0.00 35.56 2.32
6186 6910 6.287589 AGACTAGCAAGTACAGCAACTAAT 57.712 37.500 12.08 0.00 35.56 1.73
6226 6950 5.660460 TGCCAACAGTACATACATAGTCAG 58.340 41.667 0.00 0.00 0.00 3.51
6227 6951 5.420739 TCTGCCAACAGTACATACATAGTCA 59.579 40.000 0.00 0.00 44.77 3.41
6228 6952 5.902681 TCTGCCAACAGTACATACATAGTC 58.097 41.667 0.00 0.00 44.77 2.59
6231 6956 5.932619 ACTCTGCCAACAGTACATACATA 57.067 39.130 0.00 0.00 44.77 2.29
6253 6978 4.902308 ATCACCGCGATCACGAAA 57.098 50.000 8.23 0.00 42.66 3.46
6286 7011 0.953003 CTATCCCCGTCGAGAAGGTC 59.047 60.000 4.50 0.00 0.00 3.85
6319 7044 1.080501 CTCGGCGCTCTTGAACTGA 60.081 57.895 7.64 0.00 0.00 3.41
6470 7195 2.106566 TGTCAATGTGTTGTTTGGGCT 58.893 42.857 0.00 0.00 36.69 5.19
6471 7196 2.159114 AGTGTCAATGTGTTGTTTGGGC 60.159 45.455 0.00 0.00 36.69 5.36
6473 7198 4.104776 GTCAGTGTCAATGTGTTGTTTGG 58.895 43.478 0.00 0.00 36.69 3.28
6474 7199 4.731720 TGTCAGTGTCAATGTGTTGTTTG 58.268 39.130 0.00 0.00 36.69 2.93
6475 7200 4.699735 TCTGTCAGTGTCAATGTGTTGTTT 59.300 37.500 0.00 0.00 36.69 2.83
6476 7201 4.094887 GTCTGTCAGTGTCAATGTGTTGTT 59.905 41.667 0.00 0.00 36.69 2.83
6477 7202 3.623060 GTCTGTCAGTGTCAATGTGTTGT 59.377 43.478 0.00 0.00 36.69 3.32
6479 7204 3.873361 CAGTCTGTCAGTGTCAATGTGTT 59.127 43.478 0.00 0.00 0.00 3.32
6481 7206 3.721035 TCAGTCTGTCAGTGTCAATGTG 58.279 45.455 0.00 0.00 0.00 3.21
6485 7210 3.447229 TCAGTTCAGTCTGTCAGTGTCAA 59.553 43.478 0.00 0.00 36.85 3.18
6486 7211 3.023832 TCAGTTCAGTCTGTCAGTGTCA 58.976 45.455 0.00 0.00 36.85 3.58
6490 7349 3.067461 GTCAGTCAGTTCAGTCTGTCAGT 59.933 47.826 0.00 0.00 36.85 3.41
6519 7378 2.590276 CGATCGAAGTCTGAACGTTCTG 59.410 50.000 27.32 25.83 0.00 3.02
6520 7379 2.852748 CGATCGAAGTCTGAACGTTCT 58.147 47.619 27.32 8.28 0.00 3.01
6521 7380 1.317904 GCGATCGAAGTCTGAACGTTC 59.682 52.381 21.57 21.42 34.58 3.95
6523 7382 0.456312 GGCGATCGAAGTCTGAACGT 60.456 55.000 21.57 0.00 34.58 3.99
6524 7383 0.456142 TGGCGATCGAAGTCTGAACG 60.456 55.000 21.57 0.00 35.12 3.95
6525 7384 1.135373 TCTGGCGATCGAAGTCTGAAC 60.135 52.381 21.57 0.00 0.00 3.18
6526 7385 1.173913 TCTGGCGATCGAAGTCTGAA 58.826 50.000 21.57 0.00 0.00 3.02
6527 7386 1.066152 CATCTGGCGATCGAAGTCTGA 59.934 52.381 21.57 13.45 0.00 3.27
6528 7387 1.202348 ACATCTGGCGATCGAAGTCTG 60.202 52.381 21.57 17.22 0.00 3.51
6529 7388 1.107114 ACATCTGGCGATCGAAGTCT 58.893 50.000 21.57 4.98 0.00 3.24
6530 7389 1.855360 GAACATCTGGCGATCGAAGTC 59.145 52.381 21.57 5.29 0.00 3.01
6531 7390 1.471676 GGAACATCTGGCGATCGAAGT 60.472 52.381 21.57 4.05 0.00 3.01
6535 7394 0.103026 TCAGGAACATCTGGCGATCG 59.897 55.000 11.69 11.69 35.58 3.69
6540 7399 0.465705 TCGGATCAGGAACATCTGGC 59.534 55.000 0.00 0.00 35.58 4.85
6557 7416 9.144085 GCGTTAATCAATTACTTAATGTTCTCG 57.856 33.333 10.49 0.00 0.00 4.04
6567 7426 6.146510 TCAGACAACGCGTTAATCAATTACTT 59.853 34.615 26.11 4.87 0.00 2.24
6716 7575 4.780815 TGACAGTTTCTTCCAGAACACAT 58.219 39.130 0.00 0.00 33.26 3.21
6773 7632 4.172346 GCAAGCATGCGCAAATCA 57.828 50.000 17.11 0.00 43.83 2.57
6785 7644 2.478134 GACGATCATCCATACTGCAAGC 59.522 50.000 0.00 0.00 37.60 4.01
6935 7794 0.809385 CATGTCAAGCAAGCTCCCTG 59.191 55.000 0.00 0.00 0.00 4.45
6992 7851 1.384742 CGTCGTCATCATCATCATCGC 59.615 52.381 0.00 0.00 0.00 4.58
6993 7852 2.921126 TCGTCGTCATCATCATCATCG 58.079 47.619 0.00 0.00 0.00 3.84
7111 7977 1.431496 CCAGAAAGCAAAATTGGCCG 58.569 50.000 0.00 0.00 0.00 6.13
7194 8062 7.118680 TCACGAGTTGTTTCCTTGGTAAATATC 59.881 37.037 0.00 0.00 0.00 1.63
7265 8180 7.878547 TTCAAGAATTTTGGCCTGAAATTTT 57.121 28.000 22.69 17.50 36.96 1.82
7276 8191 8.828644 TGTGATCAAACATTTCAAGAATTTTGG 58.171 29.630 0.00 0.00 0.00 3.28
7299 10563 7.594758 ACATCGAAACTATTCCAACATTTTGTG 59.405 33.333 0.00 0.00 31.52 3.33
7381 10661 2.926838 GAGAAAAGATGAGTCGGCAGTC 59.073 50.000 0.00 0.00 0.00 3.51
7382 10662 2.354203 GGAGAAAAGATGAGTCGGCAGT 60.354 50.000 0.00 0.00 0.00 4.40
7383 10663 2.275318 GGAGAAAAGATGAGTCGGCAG 58.725 52.381 0.00 0.00 0.00 4.85
7384 10664 1.066143 GGGAGAAAAGATGAGTCGGCA 60.066 52.381 0.00 0.00 0.00 5.69
7385 10665 1.208293 AGGGAGAAAAGATGAGTCGGC 59.792 52.381 0.00 0.00 0.00 5.54
7386 10666 3.196685 AGAAGGGAGAAAAGATGAGTCGG 59.803 47.826 0.00 0.00 0.00 4.79
7387 10667 4.159506 AGAGAAGGGAGAAAAGATGAGTCG 59.840 45.833 0.00 0.00 0.00 4.18
7388 10668 5.422012 AGAGAGAAGGGAGAAAAGATGAGTC 59.578 44.000 0.00 0.00 0.00 3.36
7389 10669 5.341169 AGAGAGAAGGGAGAAAAGATGAGT 58.659 41.667 0.00 0.00 0.00 3.41
7390 10670 5.937975 AGAGAGAAGGGAGAAAAGATGAG 57.062 43.478 0.00 0.00 0.00 2.90
7391 10671 7.843760 AGAATAGAGAGAAGGGAGAAAAGATGA 59.156 37.037 0.00 0.00 0.00 2.92
7392 10672 8.021898 AGAATAGAGAGAAGGGAGAAAAGATG 57.978 38.462 0.00 0.00 0.00 2.90
7393 10673 8.067488 AGAGAATAGAGAGAAGGGAGAAAAGAT 58.933 37.037 0.00 0.00 0.00 2.40
7394 10674 7.418378 AGAGAATAGAGAGAAGGGAGAAAAGA 58.582 38.462 0.00 0.00 0.00 2.52
7395 10675 7.201911 GGAGAGAATAGAGAGAAGGGAGAAAAG 60.202 44.444 0.00 0.00 0.00 2.27
7413 10693 2.698653 GGGAAGGAGATGGGGAGAGAAT 60.699 54.545 0.00 0.00 0.00 2.40
7421 10701 0.182299 GCTCAAGGGAAGGAGATGGG 59.818 60.000 0.00 0.00 32.87 4.00
7492 10772 0.397254 CACCCATCCCTACTCCGACT 60.397 60.000 0.00 0.00 0.00 4.18
7580 10863 8.868522 AGCAACATATATTAGCATGTGGTATT 57.131 30.769 0.00 0.00 35.59 1.89
7584 10867 6.806388 TGAGCAACATATATTAGCATGTGG 57.194 37.500 0.00 0.00 35.59 4.17
7594 10877 7.439157 ACAACGCATAATGAGCAACATATAT 57.561 32.000 0.00 0.00 38.38 0.86
7597 10880 6.073276 GGATACAACGCATAATGAGCAACATA 60.073 38.462 0.00 0.00 38.38 2.29
7614 10897 6.673154 AATTTAGTACCAAGCGGATACAAC 57.327 37.500 0.00 0.00 35.59 3.32
7634 10917 8.922931 AAGGGCATTTTTATTGACTCAAAATT 57.077 26.923 0.00 0.00 29.49 1.82
7655 10938 5.011090 TGTCACATCTCTTCGATAAAGGG 57.989 43.478 0.00 0.00 36.74 3.95
7667 10951 2.487934 AGCAACACACTGTCACATCTC 58.512 47.619 0.00 0.00 0.00 2.75
7675 10959 3.605634 TCAAACTGTAGCAACACACTGT 58.394 40.909 0.00 0.00 0.00 3.55
7721 11005 5.810080 ATACTAGGCTTAGCGAAATTCCT 57.190 39.130 2.18 0.00 0.00 3.36
7722 11006 6.260271 ACAAATACTAGGCTTAGCGAAATTCC 59.740 38.462 2.18 0.00 0.00 3.01
7727 11011 5.353123 CCAAACAAATACTAGGCTTAGCGAA 59.647 40.000 2.18 0.00 0.00 4.70
7729 11013 4.035208 CCCAAACAAATACTAGGCTTAGCG 59.965 45.833 2.18 0.00 0.00 4.26
7742 11026 2.037121 GTGCTAACTGGCCCAAACAAAT 59.963 45.455 0.00 0.00 0.00 2.32
7746 11030 1.256812 ATGTGCTAACTGGCCCAAAC 58.743 50.000 0.00 0.00 0.00 2.93
7754 11038 6.831769 ACGACAATTCTAAATGTGCTAACTG 58.168 36.000 0.00 0.00 0.00 3.16
7782 11066 2.739943 TCTCTACACTCCATGGTCAGG 58.260 52.381 12.58 2.82 0.00 3.86
7815 11099 0.320374 ACGCTGATGGAGGAAACGAA 59.680 50.000 0.00 0.00 0.00 3.85
7818 11102 1.464997 GACAACGCTGATGGAGGAAAC 59.535 52.381 0.00 0.00 0.00 2.78
7819 11103 1.808411 GACAACGCTGATGGAGGAAA 58.192 50.000 0.00 0.00 0.00 3.13
7822 11106 0.172578 TACGACAACGCTGATGGAGG 59.827 55.000 0.00 0.00 43.96 4.30
7824 11108 2.665649 ATTACGACAACGCTGATGGA 57.334 45.000 0.00 0.00 43.96 3.41
7829 11113 0.928229 GCCCTATTACGACAACGCTG 59.072 55.000 0.00 0.00 43.96 5.18
7830 11114 0.179092 GGCCCTATTACGACAACGCT 60.179 55.000 0.00 0.00 43.96 5.07
7833 11117 2.093341 TCCTTGGCCCTATTACGACAAC 60.093 50.000 0.00 0.00 0.00 3.32
7834 11118 2.189676 TCCTTGGCCCTATTACGACAA 58.810 47.619 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.