Multiple sequence alignment - TraesCS3D01G119000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G119000 chr3D 100.000 5474 0 0 1 5474 73718220 73712747 0.000000e+00 10109
1 TraesCS3D01G119000 chr3D 96.860 637 19 1 1 637 8902105 8901470 0.000000e+00 1064
2 TraesCS3D01G119000 chr3D 95.619 662 29 0 2 663 584043593 584044254 0.000000e+00 1062
3 TraesCS3D01G119000 chr3D 86.563 387 23 14 3350 3735 4502175 4501817 3.070000e-107 399
4 TraesCS3D01G119000 chr3D 82.921 404 46 9 3350 3735 596700496 596700098 5.250000e-90 342
5 TraesCS3D01G119000 chr3B 93.081 1532 57 25 874 2368 118810995 118809476 0.000000e+00 2196
6 TraesCS3D01G119000 chr3B 93.361 964 45 13 3870 4831 118809094 118808148 0.000000e+00 1408
7 TraesCS3D01G119000 chr3B 93.684 665 40 2 1 664 546918973 546918310 0.000000e+00 994
8 TraesCS3D01G119000 chr3B 76.445 917 181 24 1013 1911 796839482 796838583 1.070000e-126 464
9 TraesCS3D01G119000 chr3B 93.770 305 17 2 4911 5215 118808148 118807846 1.800000e-124 457
10 TraesCS3D01G119000 chr3B 92.114 317 18 5 2402 2713 118809400 118809086 1.810000e-119 440
11 TraesCS3D01G119000 chr3B 93.258 178 12 0 5297 5474 118807518 118807341 4.210000e-66 263
12 TraesCS3D01G119000 chr3B 92.353 170 12 1 661 829 118811322 118811153 1.970000e-59 241
13 TraesCS3D01G119000 chr3B 97.468 79 2 0 5211 5289 118807806 118807728 9.560000e-28 135
14 TraesCS3D01G119000 chr3A 93.734 766 31 10 663 1427 86604609 86603860 0.000000e+00 1133
15 TraesCS3D01G119000 chr3A 94.831 503 11 4 1418 1917 86602899 86602409 0.000000e+00 771
16 TraesCS3D01G119000 chr3A 92.114 317 19 3 2402 2713 86601754 86601439 5.030000e-120 442
17 TraesCS3D01G119000 chr3A 92.787 305 18 3 4911 5215 86601114 86600814 6.510000e-119 438
18 TraesCS3D01G119000 chr3A 92.424 264 18 2 5211 5474 86600774 86600513 5.180000e-100 375
19 TraesCS3D01G119000 chr3A 85.816 282 20 12 4552 4831 86601377 86601114 1.160000e-71 281
20 TraesCS3D01G119000 chr3A 95.652 69 3 0 3870 3938 86601447 86601379 1.610000e-20 111
21 TraesCS3D01G119000 chr2B 95.345 666 31 0 1 666 757202086 757202751 0.000000e+00 1059
22 TraesCS3D01G119000 chr2B 94.880 664 24 6 1 663 176702946 176703600 0.000000e+00 1029
23 TraesCS3D01G119000 chr2B 93.083 665 45 1 3 666 106767127 106767791 0.000000e+00 972
24 TraesCS3D01G119000 chr2B 78.030 924 165 22 996 1900 513481221 513480317 1.040000e-151 547
25 TraesCS3D01G119000 chr2B 77.989 527 108 7 4024 4547 787818902 787818381 1.900000e-84 324
26 TraesCS3D01G119000 chr2B 80.645 403 51 12 3350 3733 728612927 728613321 2.500000e-73 287
27 TraesCS3D01G119000 chr2B 75.763 557 121 13 3984 4534 513480003 513479455 9.040000e-68 268
28 TraesCS3D01G119000 chr2B 94.059 101 5 1 573 673 157997359 157997458 9.500000e-33 152
29 TraesCS3D01G119000 chr5D 95.468 662 29 1 1 661 279310923 279311584 0.000000e+00 1055
30 TraesCS3D01G119000 chr5D 79.207 933 167 19 1000 1913 441927045 441926121 1.670000e-174 623
31 TraesCS3D01G119000 chr5D 91.228 399 20 7 3345 3733 417035305 417034912 3.760000e-146 529
32 TraesCS3D01G119000 chr5D 86.260 393 24 17 3350 3740 274568773 274569137 3.070000e-107 399
33 TraesCS3D01G119000 chr5D 82.439 410 49 9 3349 3740 460403642 460404046 2.440000e-88 337
34 TraesCS3D01G119000 chr5D 82.134 403 49 8 3351 3735 9285756 9285359 1.900000e-84 324
35 TraesCS3D01G119000 chr5D 81.931 404 49 10 3350 3735 456614082 456614479 2.460000e-83 320
36 TraesCS3D01G119000 chr5D 75.487 616 137 13 3906 4515 522759643 522759036 6.940000e-74 289
37 TraesCS3D01G119000 chr4B 95.015 662 32 1 2 663 125379945 125380605 0.000000e+00 1038
38 TraesCS3D01G119000 chr7A 94.627 670 35 1 1 670 131941032 131940364 0.000000e+00 1037
39 TraesCS3D01G119000 chr7A 89.706 136 12 2 3736 3871 649113827 649113694 7.290000e-39 172
40 TraesCS3D01G119000 chr7D 79.978 924 170 14 986 1900 591206888 591207805 0.000000e+00 667
41 TraesCS3D01G119000 chr7D 88.462 390 33 8 3349 3735 585313581 585313961 1.390000e-125 460
42 TraesCS3D01G119000 chr7D 86.563 387 23 14 3350 3735 33043566 33043208 3.070000e-107 399
43 TraesCS3D01G119000 chr7D 82.921 404 46 9 3350 3735 28783678 28783280 5.250000e-90 342
44 TraesCS3D01G119000 chr7D 93.103 174 5 1 3569 3735 585744339 585744166 1.180000e-61 248
45 TraesCS3D01G119000 chr5B 79.871 929 160 20 1000 1911 537964066 537963148 0.000000e+00 654
46 TraesCS3D01G119000 chr5B 81.436 404 51 10 3350 3735 705383526 705383129 5.330000e-80 309
47 TraesCS3D01G119000 chr5B 76.875 480 103 8 4066 4541 622555530 622556005 1.170000e-66 265
48 TraesCS3D01G119000 chr2D 96.259 401 6 7 2958 3349 10204917 10204517 0.000000e+00 649
49 TraesCS3D01G119000 chr2D 77.564 936 183 19 984 1905 3035764 3034842 1.730000e-149 540
50 TraesCS3D01G119000 chr2D 90.977 399 22 4 3350 3739 338338502 338338895 4.860000e-145 525
51 TraesCS3D01G119000 chr2D 77.263 928 183 20 996 1903 4029544 4028625 2.260000e-143 520
52 TraesCS3D01G119000 chr2D 76.989 930 182 21 996 1903 3971949 3971030 2.280000e-138 503
53 TraesCS3D01G119000 chr2D 88.144 388 25 12 3350 3735 155167113 155167481 5.030000e-120 442
54 TraesCS3D01G119000 chr2D 97.992 249 4 1 2714 2961 10205285 10205037 1.090000e-116 431
55 TraesCS3D01G119000 chr2D 86.835 395 24 15 3347 3739 121363468 121363836 3.050000e-112 416
56 TraesCS3D01G119000 chr2D 97.391 230 6 0 3350 3579 311554310 311554539 5.140000e-105 392
57 TraesCS3D01G119000 chr2D 83.005 406 44 10 3349 3735 293156093 293156492 1.460000e-90 344
58 TraesCS3D01G119000 chr2D 78.220 528 105 9 4024 4547 650654668 650654147 4.090000e-86 329
59 TraesCS3D01G119000 chr2D 81.931 404 50 11 3350 3735 44916888 44917286 2.460000e-83 320
60 TraesCS3D01G119000 chr2D 77.153 569 118 11 3984 4547 650660879 650660318 2.460000e-83 320
61 TraesCS3D01G119000 chr2D 75.710 634 142 11 3906 4534 435071083 435070457 1.920000e-79 307
62 TraesCS3D01G119000 chr2D 76.923 468 94 14 4072 4532 11963221 11962761 2.530000e-63 254
63 TraesCS3D01G119000 chr2D 95.522 134 4 2 3736 3869 10204524 10204393 4.300000e-51 213
64 TraesCS3D01G119000 chr5A 79.460 852 143 23 1045 1877 558311908 558311070 4.760000e-160 575
65 TraesCS3D01G119000 chr1D 90.886 395 22 4 3350 3735 55033665 55033276 8.130000e-143 518
66 TraesCS3D01G119000 chr1D 82.294 401 48 9 3350 3732 433280467 433280862 5.290000e-85 326
67 TraesCS3D01G119000 chr1D 91.429 175 7 1 3569 3735 487347137 487346963 3.300000e-57 233
68 TraesCS3D01G119000 chr2A 79.418 481 89 10 4072 4547 772219270 772218795 1.140000e-86 331
69 TraesCS3D01G119000 chr2A 77.925 453 86 13 4072 4517 12588668 12588223 2.510000e-68 270
70 TraesCS3D01G119000 chr2A 74.214 636 148 15 3904 4532 12701015 12700389 9.100000e-63 252
71 TraesCS3D01G119000 chr4D 89.286 140 7 1 3604 3735 418852926 418853065 9.430000e-38 169
72 TraesCS3D01G119000 chr4D 92.308 78 6 0 3660 3737 498757620 498757697 1.610000e-20 111


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G119000 chr3D 73712747 73718220 5473 True 10109.000000 10109 100.000000 1 5474 1 chr3D.!!$R3 5473
1 TraesCS3D01G119000 chr3D 8901470 8902105 635 True 1064.000000 1064 96.860000 1 637 1 chr3D.!!$R2 636
2 TraesCS3D01G119000 chr3D 584043593 584044254 661 False 1062.000000 1062 95.619000 2 663 1 chr3D.!!$F1 661
3 TraesCS3D01G119000 chr3B 546918310 546918973 663 True 994.000000 994 93.684000 1 664 1 chr3B.!!$R1 663
4 TraesCS3D01G119000 chr3B 118807341 118811322 3981 True 734.285714 2196 93.629286 661 5474 7 chr3B.!!$R3 4813
5 TraesCS3D01G119000 chr3B 796838583 796839482 899 True 464.000000 464 76.445000 1013 1911 1 chr3B.!!$R2 898
6 TraesCS3D01G119000 chr3A 86600513 86604609 4096 True 507.285714 1133 92.479714 663 5474 7 chr3A.!!$R1 4811
7 TraesCS3D01G119000 chr2B 757202086 757202751 665 False 1059.000000 1059 95.345000 1 666 1 chr2B.!!$F5 665
8 TraesCS3D01G119000 chr2B 176702946 176703600 654 False 1029.000000 1029 94.880000 1 663 1 chr2B.!!$F3 662
9 TraesCS3D01G119000 chr2B 106767127 106767791 664 False 972.000000 972 93.083000 3 666 1 chr2B.!!$F1 663
10 TraesCS3D01G119000 chr2B 513479455 513481221 1766 True 407.500000 547 76.896500 996 4534 2 chr2B.!!$R2 3538
11 TraesCS3D01G119000 chr2B 787818381 787818902 521 True 324.000000 324 77.989000 4024 4547 1 chr2B.!!$R1 523
12 TraesCS3D01G119000 chr5D 279310923 279311584 661 False 1055.000000 1055 95.468000 1 661 1 chr5D.!!$F2 660
13 TraesCS3D01G119000 chr5D 441926121 441927045 924 True 623.000000 623 79.207000 1000 1913 1 chr5D.!!$R3 913
14 TraesCS3D01G119000 chr5D 522759036 522759643 607 True 289.000000 289 75.487000 3906 4515 1 chr5D.!!$R4 609
15 TraesCS3D01G119000 chr4B 125379945 125380605 660 False 1038.000000 1038 95.015000 2 663 1 chr4B.!!$F1 661
16 TraesCS3D01G119000 chr7A 131940364 131941032 668 True 1037.000000 1037 94.627000 1 670 1 chr7A.!!$R1 669
17 TraesCS3D01G119000 chr7D 591206888 591207805 917 False 667.000000 667 79.978000 986 1900 1 chr7D.!!$F2 914
18 TraesCS3D01G119000 chr5B 537963148 537964066 918 True 654.000000 654 79.871000 1000 1911 1 chr5B.!!$R1 911
19 TraesCS3D01G119000 chr2D 3034842 3035764 922 True 540.000000 540 77.564000 984 1905 1 chr2D.!!$R1 921
20 TraesCS3D01G119000 chr2D 4028625 4029544 919 True 520.000000 520 77.263000 996 1903 1 chr2D.!!$R3 907
21 TraesCS3D01G119000 chr2D 3971030 3971949 919 True 503.000000 503 76.989000 996 1903 1 chr2D.!!$R2 907
22 TraesCS3D01G119000 chr2D 10204393 10205285 892 True 431.000000 649 96.591000 2714 3869 3 chr2D.!!$R8 1155
23 TraesCS3D01G119000 chr2D 650654147 650654668 521 True 329.000000 329 78.220000 4024 4547 1 chr2D.!!$R6 523
24 TraesCS3D01G119000 chr2D 650660318 650660879 561 True 320.000000 320 77.153000 3984 4547 1 chr2D.!!$R7 563
25 TraesCS3D01G119000 chr2D 435070457 435071083 626 True 307.000000 307 75.710000 3906 4534 1 chr2D.!!$R5 628
26 TraesCS3D01G119000 chr5A 558311070 558311908 838 True 575.000000 575 79.460000 1045 1877 1 chr5A.!!$R1 832
27 TraesCS3D01G119000 chr2A 12700389 12701015 626 True 252.000000 252 74.214000 3904 4532 1 chr2A.!!$R2 628

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
956 1104 0.749091 TGCGCCATGCTTAAGCTGAT 60.749 50.0 26.90 11.47 46.63 2.90 F
1940 3264 1.087771 GTACACACATACCTGCCGGC 61.088 60.0 22.73 22.73 0.00 6.13 F
3495 5042 0.030773 CGCCTCACAGATAAGCGCTA 59.969 55.0 12.05 0.00 40.35 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1973 3316 0.104855 AGCCGATAGCAGCAAATCGA 59.895 50.0 24.28 0.0 46.08 3.59 R
3764 5311 0.171679 CATGCGCAGGAGATTTTGCA 59.828 50.0 18.87 0.0 40.28 4.08 R
4929 6479 0.036388 ACCCCTACATCGCACACAAG 60.036 55.0 0.00 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
129 130 2.890945 GAGAGAGAAGTAGATGAGGGCC 59.109 54.545 0.00 0.00 0.00 5.80
227 228 6.226052 TGATTTATGAGTTGATCATCGGAGG 58.774 40.000 0.00 0.00 46.01 4.30
279 282 3.842820 CTCGATCATCGGTATTCAGCAT 58.157 45.455 7.33 0.00 40.88 3.79
280 283 4.675408 GCTCGATCATCGGTATTCAGCATA 60.675 45.833 7.33 0.00 40.88 3.14
434 437 4.585955 AGAAGAAGCGACTGACAGTAAA 57.414 40.909 8.41 0.00 0.00 2.01
631 644 8.900781 GGATGTATAATATAAGCTGTAGACGGA 58.099 37.037 0.00 0.00 0.00 4.69
734 747 4.437390 GGATATGTTTTTGCTCGGTGACTG 60.437 45.833 0.00 0.00 0.00 3.51
739 752 0.750249 TTTGCTCGGTGACTGTCTCA 59.250 50.000 9.51 0.00 0.00 3.27
757 770 1.746787 TCATCCACAATCTGCATGCAC 59.253 47.619 18.46 0.00 0.00 4.57
766 779 1.521580 TCTGCATGCACACGAATTGA 58.478 45.000 18.46 7.13 0.00 2.57
788 801 2.224113 ACGAAAGTTTGACCCTTAGCGA 60.224 45.455 0.00 0.00 46.40 4.93
818 832 5.950023 ACTACTCCCTCCGTCTCATAATAA 58.050 41.667 0.00 0.00 0.00 1.40
821 835 4.589374 ACTCCCTCCGTCTCATAATAAAGG 59.411 45.833 0.00 0.00 0.00 3.11
823 837 5.213519 TCCCTCCGTCTCATAATAAAGGAA 58.786 41.667 0.00 0.00 0.00 3.36
830 844 9.893634 TCCGTCTCATAATAAAGGAATGTTTAA 57.106 29.630 0.00 0.00 0.00 1.52
868 1016 6.770286 AAGTGATACCATATGTGATCCCTT 57.230 37.500 1.24 4.36 0.00 3.95
956 1104 0.749091 TGCGCCATGCTTAAGCTGAT 60.749 50.000 26.90 11.47 46.63 2.90
1176 1336 1.414919 GTCCTCCCGCACCATACAATA 59.585 52.381 0.00 0.00 0.00 1.90
1177 1337 1.691976 TCCTCCCGCACCATACAATAG 59.308 52.381 0.00 0.00 0.00 1.73
1905 3056 8.718734 ACCGTCTTATTTGTGAGTATTCTTTTC 58.281 33.333 0.00 0.00 0.00 2.29
1932 3255 5.496133 ACTCATAGACCGTACACACATAC 57.504 43.478 0.00 0.00 0.00 2.39
1940 3264 1.087771 GTACACACATACCTGCCGGC 61.088 60.000 22.73 22.73 0.00 6.13
1970 3313 5.527214 TGTTCTGTTCACCTTATGTCACTTG 59.473 40.000 0.00 0.00 0.00 3.16
1973 3316 4.460263 TGTTCACCTTATGTCACTTGCTT 58.540 39.130 0.00 0.00 0.00 3.91
2008 3351 2.485795 GCTGAGATCGAGGCGGAGT 61.486 63.158 0.00 0.00 0.00 3.85
2057 3420 4.762251 GGGGAAACTAACCATGCATCTATC 59.238 45.833 0.00 0.00 0.00 2.08
2058 3421 5.456763 GGGGAAACTAACCATGCATCTATCT 60.457 44.000 0.00 0.00 0.00 1.98
2059 3422 6.239887 GGGGAAACTAACCATGCATCTATCTA 60.240 42.308 0.00 0.00 0.00 1.98
2060 3423 7.398024 GGGAAACTAACCATGCATCTATCTAT 58.602 38.462 0.00 0.00 0.00 1.98
2241 3604 5.666969 TTCACAAATACAACCTCAGTTCG 57.333 39.130 0.00 0.00 32.45 3.95
2248 3611 7.383300 ACAAATACAACCTCAGTTCGTAAGTAC 59.617 37.037 0.00 0.00 37.98 2.73
2330 3698 4.927978 TGTGTTGGGTGGATAAAAACAG 57.072 40.909 0.00 0.00 31.80 3.16
2390 3758 4.957759 AACAGTTCCGTAAACATATGGC 57.042 40.909 7.80 0.00 40.56 4.40
2391 3759 3.945346 ACAGTTCCGTAAACATATGGCA 58.055 40.909 7.80 0.00 40.56 4.92
2392 3760 4.328536 ACAGTTCCGTAAACATATGGCAA 58.671 39.130 7.80 0.00 40.56 4.52
2393 3761 4.762765 ACAGTTCCGTAAACATATGGCAAA 59.237 37.500 7.80 0.00 40.56 3.68
2394 3762 5.241949 ACAGTTCCGTAAACATATGGCAAAA 59.758 36.000 7.80 0.00 40.56 2.44
2395 3763 6.071616 ACAGTTCCGTAAACATATGGCAAAAT 60.072 34.615 7.80 0.00 40.56 1.82
2397 3765 8.134895 CAGTTCCGTAAACATATGGCAAAATAT 58.865 33.333 7.80 0.00 40.56 1.28
2399 3767 9.953697 GTTCCGTAAACATATGGCAAAATATTA 57.046 29.630 7.80 0.00 37.82 0.98
2400 3768 9.953697 TTCCGTAAACATATGGCAAAATATTAC 57.046 29.630 7.80 0.00 0.00 1.89
2452 3862 9.467258 AAGTGTCAATGTTTAAAATGTCATCTG 57.533 29.630 0.00 0.00 0.00 2.90
2504 3914 5.419542 TCTCATTGGTCAAATCCGAGTAAG 58.580 41.667 0.00 0.00 0.00 2.34
2602 4012 9.544579 AAGTTGTCTTCCCTAAGTAACTATAGT 57.455 33.333 0.00 0.00 38.76 2.12
2762 4177 1.129811 GACACCGCCTTATCAAAACCG 59.870 52.381 0.00 0.00 0.00 4.44
3060 4599 5.127682 AGAAAAATGGAGAGAGAGAGAGAGC 59.872 44.000 0.00 0.00 0.00 4.09
3081 4622 2.604914 CGCGCATATGACAGAGAACTTT 59.395 45.455 8.75 0.00 0.00 2.66
3126 4668 7.495279 CACATAGAAAAATGGAGAGAGGAAGAG 59.505 40.741 0.00 0.00 0.00 2.85
3187 4729 0.106708 TCTGAAACGGCAGAGCAAGT 59.893 50.000 0.00 0.00 39.84 3.16
3219 4761 2.491693 GTGGCGAAAAGGAATCCATTGA 59.508 45.455 0.61 0.00 0.00 2.57
3221 4763 3.130869 TGGCGAAAAGGAATCCATTGATG 59.869 43.478 0.61 0.00 0.00 3.07
3344 4891 1.072489 TCCCTGTTTGACCGCATAACA 59.928 47.619 0.00 0.00 0.00 2.41
3345 4892 1.883275 CCCTGTTTGACCGCATAACAA 59.117 47.619 0.00 0.00 31.98 2.83
3346 4893 2.351350 CCCTGTTTGACCGCATAACAAC 60.351 50.000 0.00 0.00 31.98 3.32
3347 4894 2.292016 CCTGTTTGACCGCATAACAACA 59.708 45.455 0.00 0.00 31.98 3.33
3348 4895 3.554524 CTGTTTGACCGCATAACAACAG 58.445 45.455 0.00 0.00 31.98 3.16
3349 4896 2.292016 TGTTTGACCGCATAACAACAGG 59.708 45.455 0.00 0.00 0.00 4.00
3350 4897 1.529226 TTGACCGCATAACAACAGGG 58.471 50.000 0.00 0.00 0.00 4.45
3351 4898 0.958382 TGACCGCATAACAACAGGGC 60.958 55.000 0.00 0.00 0.00 5.19
3352 4899 0.958382 GACCGCATAACAACAGGGCA 60.958 55.000 0.00 0.00 0.00 5.36
3353 4900 0.538516 ACCGCATAACAACAGGGCAA 60.539 50.000 0.00 0.00 0.00 4.52
3354 4901 0.600557 CCGCATAACAACAGGGCAAA 59.399 50.000 0.00 0.00 0.00 3.68
3355 4902 1.204467 CCGCATAACAACAGGGCAAAT 59.796 47.619 0.00 0.00 0.00 2.32
3356 4903 2.353605 CCGCATAACAACAGGGCAAATT 60.354 45.455 0.00 0.00 0.00 1.82
3357 4904 3.324993 CGCATAACAACAGGGCAAATTT 58.675 40.909 0.00 0.00 0.00 1.82
3358 4905 3.123284 CGCATAACAACAGGGCAAATTTG 59.877 43.478 14.03 14.03 0.00 2.32
3359 4906 4.314121 GCATAACAACAGGGCAAATTTGA 58.686 39.130 22.31 0.00 0.00 2.69
3360 4907 4.152223 GCATAACAACAGGGCAAATTTGAC 59.848 41.667 22.31 19.34 34.70 3.18
3361 4908 3.902881 AACAACAGGGCAAATTTGACA 57.097 38.095 25.05 0.00 38.18 3.58
3362 4909 3.902881 ACAACAGGGCAAATTTGACAA 57.097 38.095 25.05 0.00 38.18 3.18
3363 4910 4.420522 ACAACAGGGCAAATTTGACAAT 57.579 36.364 25.05 10.59 38.18 2.71
3364 4911 4.779696 ACAACAGGGCAAATTTGACAATT 58.220 34.783 25.05 12.73 38.18 2.32
3365 4912 5.192176 ACAACAGGGCAAATTTGACAATTT 58.808 33.333 25.05 11.27 42.37 1.82
3366 4913 5.651576 ACAACAGGGCAAATTTGACAATTTT 59.348 32.000 25.05 9.77 40.09 1.82
3367 4914 5.754543 ACAGGGCAAATTTGACAATTTTG 57.245 34.783 25.05 22.48 40.09 2.44
3368 4915 5.435291 ACAGGGCAAATTTGACAATTTTGA 58.565 33.333 27.56 0.07 40.09 2.69
3369 4916 5.296531 ACAGGGCAAATTTGACAATTTTGAC 59.703 36.000 27.56 25.82 40.09 3.18
3370 4917 5.528320 CAGGGCAAATTTGACAATTTTGACT 59.472 36.000 27.85 22.55 40.09 3.41
3371 4918 6.038492 CAGGGCAAATTTGACAATTTTGACTT 59.962 34.615 27.85 22.41 40.09 3.01
3372 4919 7.226325 CAGGGCAAATTTGACAATTTTGACTTA 59.774 33.333 27.85 0.00 40.09 2.24
3373 4920 7.938490 AGGGCAAATTTGACAATTTTGACTTAT 59.062 29.630 27.85 17.63 40.09 1.73
3374 4921 9.213799 GGGCAAATTTGACAATTTTGACTTATA 57.786 29.630 27.85 0.00 40.09 0.98
3399 4946 8.679288 AATCGAAATCAAATCACAGAATGAAC 57.321 30.769 0.00 0.00 41.93 3.18
3400 4947 7.439157 TCGAAATCAAATCACAGAATGAACT 57.561 32.000 0.00 0.00 41.93 3.01
3401 4948 7.300320 TCGAAATCAAATCACAGAATGAACTG 58.700 34.615 0.00 0.00 41.93 3.16
3402 4949 6.525628 CGAAATCAAATCACAGAATGAACTGG 59.474 38.462 0.00 0.00 41.93 4.00
3403 4950 6.906157 AATCAAATCACAGAATGAACTGGT 57.094 33.333 0.00 0.00 41.93 4.00
3404 4951 6.906157 ATCAAATCACAGAATGAACTGGTT 57.094 33.333 0.00 0.00 41.93 3.67
3405 4952 6.075762 TCAAATCACAGAATGAACTGGTTG 57.924 37.500 0.00 0.00 41.93 3.77
3406 4953 4.510038 AATCACAGAATGAACTGGTTGC 57.490 40.909 0.00 0.00 41.93 4.17
3407 4954 1.872952 TCACAGAATGAACTGGTTGCG 59.127 47.619 0.00 0.00 39.69 4.85
3408 4955 1.872952 CACAGAATGAACTGGTTGCGA 59.127 47.619 0.00 0.00 39.69 5.10
3409 4956 2.290367 CACAGAATGAACTGGTTGCGAA 59.710 45.455 0.00 0.00 39.69 4.70
3410 4957 2.948979 ACAGAATGAACTGGTTGCGAAA 59.051 40.909 0.00 0.00 39.69 3.46
3411 4958 3.243068 ACAGAATGAACTGGTTGCGAAAC 60.243 43.478 0.00 0.00 39.69 2.78
3412 4959 3.003689 CAGAATGAACTGGTTGCGAAACT 59.996 43.478 6.17 0.00 39.69 2.66
3413 4960 4.213270 CAGAATGAACTGGTTGCGAAACTA 59.787 41.667 6.17 0.00 39.69 2.24
3414 4961 5.003804 AGAATGAACTGGTTGCGAAACTAT 58.996 37.500 6.17 0.00 0.00 2.12
3415 4962 5.473504 AGAATGAACTGGTTGCGAAACTATT 59.526 36.000 6.17 0.00 0.00 1.73
3416 4963 5.705609 ATGAACTGGTTGCGAAACTATTT 57.294 34.783 6.17 0.00 0.00 1.40
3417 4964 5.103290 TGAACTGGTTGCGAAACTATTTC 57.897 39.130 13.74 13.74 36.32 2.17
3418 4965 4.576873 TGAACTGGTTGCGAAACTATTTCA 59.423 37.500 17.86 17.86 39.63 2.69
3419 4966 4.483476 ACTGGTTGCGAAACTATTTCAC 57.517 40.909 6.17 0.00 39.63 3.18
3420 4967 4.134563 ACTGGTTGCGAAACTATTTCACT 58.865 39.130 6.17 0.00 39.63 3.41
3421 4968 4.578928 ACTGGTTGCGAAACTATTTCACTT 59.421 37.500 6.17 0.00 39.63 3.16
3422 4969 5.103290 TGGTTGCGAAACTATTTCACTTC 57.897 39.130 6.17 0.00 39.63 3.01
3423 4970 4.023536 TGGTTGCGAAACTATTTCACTTCC 60.024 41.667 6.17 1.11 39.63 3.46
3424 4971 4.473199 GTTGCGAAACTATTTCACTTCCC 58.527 43.478 0.00 0.00 39.63 3.97
3425 4972 4.015872 TGCGAAACTATTTCACTTCCCT 57.984 40.909 2.50 0.00 39.63 4.20
3426 4973 3.751175 TGCGAAACTATTTCACTTCCCTG 59.249 43.478 2.50 0.00 39.63 4.45
3427 4974 4.000988 GCGAAACTATTTCACTTCCCTGA 58.999 43.478 2.50 0.00 39.63 3.86
3428 4975 4.142881 GCGAAACTATTTCACTTCCCTGAC 60.143 45.833 2.50 0.00 39.63 3.51
3429 4976 4.392138 CGAAACTATTTCACTTCCCTGACC 59.608 45.833 2.50 0.00 39.63 4.02
3430 4977 4.302559 AACTATTTCACTTCCCTGACCC 57.697 45.455 0.00 0.00 0.00 4.46
3431 4978 3.532102 ACTATTTCACTTCCCTGACCCT 58.468 45.455 0.00 0.00 0.00 4.34
3432 4979 3.916989 ACTATTTCACTTCCCTGACCCTT 59.083 43.478 0.00 0.00 0.00 3.95
3433 4980 3.903530 ATTTCACTTCCCTGACCCTTT 57.096 42.857 0.00 0.00 0.00 3.11
3434 4981 3.680777 TTTCACTTCCCTGACCCTTTT 57.319 42.857 0.00 0.00 0.00 2.27
3435 4982 2.656947 TCACTTCCCTGACCCTTTTG 57.343 50.000 0.00 0.00 0.00 2.44
3436 4983 1.850345 TCACTTCCCTGACCCTTTTGT 59.150 47.619 0.00 0.00 0.00 2.83
3437 4984 1.956477 CACTTCCCTGACCCTTTTGTG 59.044 52.381 0.00 0.00 0.00 3.33
3438 4985 1.569072 ACTTCCCTGACCCTTTTGTGT 59.431 47.619 0.00 0.00 0.00 3.72
3439 4986 2.781174 ACTTCCCTGACCCTTTTGTGTA 59.219 45.455 0.00 0.00 0.00 2.90
3440 4987 3.181443 ACTTCCCTGACCCTTTTGTGTAG 60.181 47.826 0.00 0.00 0.00 2.74
3441 4988 1.073284 TCCCTGACCCTTTTGTGTAGC 59.927 52.381 0.00 0.00 0.00 3.58
3442 4989 1.156736 CCTGACCCTTTTGTGTAGCG 58.843 55.000 0.00 0.00 0.00 4.26
3443 4990 0.517316 CTGACCCTTTTGTGTAGCGC 59.483 55.000 0.00 0.00 0.00 5.92
3444 4991 0.887387 TGACCCTTTTGTGTAGCGCC 60.887 55.000 2.29 0.00 0.00 6.53
3445 4992 1.583495 GACCCTTTTGTGTAGCGCCC 61.583 60.000 2.29 0.00 0.00 6.13
3446 4993 2.686816 CCCTTTTGTGTAGCGCCCG 61.687 63.158 2.29 0.00 0.00 6.13
3447 4994 2.175811 CTTTTGTGTAGCGCCCGC 59.824 61.111 2.29 4.20 42.33 6.13
3448 4995 3.322706 CTTTTGTGTAGCGCCCGCC 62.323 63.158 2.29 0.00 43.17 6.13
3449 4996 4.627801 TTTGTGTAGCGCCCGCCA 62.628 61.111 2.29 0.00 43.17 5.69
3471 5018 4.016706 GGCGCCACACCCTACTGT 62.017 66.667 24.80 0.00 0.00 3.55
3472 5019 2.742372 GCGCCACACCCTACTGTG 60.742 66.667 0.00 0.00 41.19 3.66
3473 5020 2.742372 CGCCACACCCTACTGTGC 60.742 66.667 0.00 0.00 40.33 4.57
3474 5021 2.429930 GCCACACCCTACTGTGCA 59.570 61.111 0.00 0.00 40.33 4.57
3475 5022 1.228124 GCCACACCCTACTGTGCAA 60.228 57.895 0.00 0.00 40.33 4.08
3476 5023 1.515521 GCCACACCCTACTGTGCAAC 61.516 60.000 0.00 0.00 40.33 4.17
3477 5024 1.227999 CCACACCCTACTGTGCAACG 61.228 60.000 0.00 0.00 42.39 4.10
3478 5025 1.597027 ACACCCTACTGTGCAACGC 60.597 57.895 0.00 0.00 42.39 4.84
3479 5026 2.032071 ACCCTACTGTGCAACGCC 59.968 61.111 0.00 0.00 42.39 5.68
3480 5027 2.347490 CCCTACTGTGCAACGCCT 59.653 61.111 0.00 0.00 42.39 5.52
3481 5028 1.741770 CCCTACTGTGCAACGCCTC 60.742 63.158 0.00 0.00 42.39 4.70
3482 5029 1.005037 CCTACTGTGCAACGCCTCA 60.005 57.895 0.00 0.00 42.39 3.86
3483 5030 1.291877 CCTACTGTGCAACGCCTCAC 61.292 60.000 0.00 0.00 42.39 3.51
3484 5031 0.599991 CTACTGTGCAACGCCTCACA 60.600 55.000 0.00 4.54 42.39 3.58
3486 5033 2.503546 TGTGCAACGCCTCACAGA 59.496 55.556 0.00 0.00 42.39 3.41
3487 5034 1.071299 TGTGCAACGCCTCACAGAT 59.929 52.632 0.00 0.00 42.39 2.90
3488 5035 0.320050 TGTGCAACGCCTCACAGATA 59.680 50.000 0.00 0.00 42.39 1.98
3489 5036 1.270571 TGTGCAACGCCTCACAGATAA 60.271 47.619 0.00 0.00 42.39 1.75
3490 5037 1.394917 GTGCAACGCCTCACAGATAAG 59.605 52.381 0.00 0.00 33.63 1.73
3491 5038 0.375106 GCAACGCCTCACAGATAAGC 59.625 55.000 0.00 0.00 0.00 3.09
3493 5040 3.313750 CGCCTCACAGATAAGCGC 58.686 61.111 0.00 0.00 40.35 5.92
3494 5041 1.227089 CGCCTCACAGATAAGCGCT 60.227 57.895 2.64 2.64 40.35 5.92
3495 5042 0.030773 CGCCTCACAGATAAGCGCTA 59.969 55.000 12.05 0.00 40.35 4.26
3496 5043 1.492720 GCCTCACAGATAAGCGCTAC 58.507 55.000 12.05 5.62 0.00 3.58
3497 5044 1.202417 GCCTCACAGATAAGCGCTACA 60.202 52.381 12.05 1.08 0.00 2.74
3498 5045 2.464865 CCTCACAGATAAGCGCTACAC 58.535 52.381 12.05 4.79 0.00 2.90
3500 5047 1.200483 CACAGATAAGCGCTACACGG 58.800 55.000 12.05 8.27 43.93 4.94
3501 5048 0.527817 ACAGATAAGCGCTACACGGC 60.528 55.000 12.05 0.00 43.93 5.68
3502 5049 1.067582 AGATAAGCGCTACACGGCC 59.932 57.895 12.05 0.00 43.93 6.13
3503 5050 1.227147 GATAAGCGCTACACGGCCA 60.227 57.895 12.05 0.00 43.93 5.36
3504 5051 1.215655 GATAAGCGCTACACGGCCAG 61.216 60.000 12.05 0.00 43.93 4.85
3517 5064 4.830765 GCCAGCGTCGCACCCATA 62.831 66.667 21.09 0.00 0.00 2.74
3518 5065 2.108976 CCAGCGTCGCACCCATAT 59.891 61.111 21.09 0.00 0.00 1.78
3519 5066 2.246739 CCAGCGTCGCACCCATATG 61.247 63.158 21.09 6.70 0.00 1.78
3520 5067 1.521457 CAGCGTCGCACCCATATGT 60.521 57.895 21.09 0.00 0.00 2.29
3521 5068 1.521457 AGCGTCGCACCCATATGTG 60.521 57.895 21.09 0.00 39.29 3.21
3530 5077 2.989909 CACCCATATGTGCTCAAGTCA 58.010 47.619 1.24 0.00 0.00 3.41
3531 5078 2.941064 CACCCATATGTGCTCAAGTCAG 59.059 50.000 1.24 0.00 0.00 3.51
3532 5079 1.945394 CCCATATGTGCTCAAGTCAGC 59.055 52.381 1.24 0.00 40.13 4.26
3533 5080 1.596260 CCATATGTGCTCAAGTCAGCG 59.404 52.381 1.24 0.00 42.92 5.18
3534 5081 2.274437 CATATGTGCTCAAGTCAGCGT 58.726 47.619 0.00 0.00 42.92 5.07
3535 5082 1.713597 TATGTGCTCAAGTCAGCGTG 58.286 50.000 0.00 0.00 42.92 5.34
3536 5083 1.572085 ATGTGCTCAAGTCAGCGTGC 61.572 55.000 0.00 0.00 42.92 5.34
3537 5084 2.108771 TGCTCAAGTCAGCGTGCA 59.891 55.556 0.00 0.00 42.92 4.57
3538 5085 1.957695 TGCTCAAGTCAGCGTGCAG 60.958 57.895 0.00 0.00 42.92 4.41
3555 5102 2.025441 GCGCCTGAGAGCTAGACG 59.975 66.667 0.00 0.00 35.67 4.18
3556 5103 2.025441 CGCCTGAGAGCTAGACGC 59.975 66.667 0.00 0.00 39.57 5.19
3557 5104 2.415426 GCCTGAGAGCTAGACGCC 59.585 66.667 0.00 0.00 40.39 5.68
3558 5105 2.418910 GCCTGAGAGCTAGACGCCA 61.419 63.158 0.00 0.00 40.39 5.69
3559 5106 1.435515 CCTGAGAGCTAGACGCCAC 59.564 63.158 0.00 0.00 40.39 5.01
3560 5107 1.315981 CCTGAGAGCTAGACGCCACA 61.316 60.000 0.00 0.00 40.39 4.17
3561 5108 0.179150 CTGAGAGCTAGACGCCACAC 60.179 60.000 0.00 0.00 40.39 3.82
3562 5109 0.609406 TGAGAGCTAGACGCCACACT 60.609 55.000 0.00 0.00 40.39 3.55
3563 5110 1.339727 TGAGAGCTAGACGCCACACTA 60.340 52.381 0.00 0.00 40.39 2.74
3564 5111 1.064357 GAGAGCTAGACGCCACACTAC 59.936 57.143 0.00 0.00 40.39 2.73
3565 5112 0.809385 GAGCTAGACGCCACACTACA 59.191 55.000 0.00 0.00 40.39 2.74
3566 5113 0.526662 AGCTAGACGCCACACTACAC 59.473 55.000 0.00 0.00 40.39 2.90
3567 5114 0.242825 GCTAGACGCCACACTACACA 59.757 55.000 0.00 0.00 0.00 3.72
3568 5115 1.732732 GCTAGACGCCACACTACACAG 60.733 57.143 0.00 0.00 0.00 3.66
3569 5116 1.540267 CTAGACGCCACACTACACAGT 59.460 52.381 0.00 0.00 34.42 3.55
3576 5123 2.856032 CACTACACAGTGCAGCGC 59.144 61.111 0.00 0.00 45.44 5.92
3577 5124 2.357517 ACTACACAGTGCAGCGCC 60.358 61.111 2.29 0.00 32.25 6.53
3578 5125 2.047844 CTACACAGTGCAGCGCCT 60.048 61.111 2.29 0.00 0.00 5.52
3579 5126 2.357396 TACACAGTGCAGCGCCTG 60.357 61.111 2.29 6.84 34.62 4.85
3580 5127 2.770132 CTACACAGTGCAGCGCCTGA 62.770 60.000 16.77 0.00 33.40 3.86
3581 5128 2.770132 TACACAGTGCAGCGCCTGAG 62.770 60.000 16.77 11.77 33.40 3.35
3582 5129 3.619767 ACAGTGCAGCGCCTGAGA 61.620 61.111 16.77 0.00 33.40 3.27
3583 5130 2.814341 CAGTGCAGCGCCTGAGAG 60.814 66.667 2.29 0.00 32.44 3.20
3584 5131 4.756458 AGTGCAGCGCCTGAGAGC 62.756 66.667 2.29 0.00 39.42 4.09
3593 5140 3.150335 CCTGAGAGCTAGGCGCCA 61.150 66.667 31.54 14.00 40.39 5.69
3594 5141 2.105930 CTGAGAGCTAGGCGCCAC 59.894 66.667 31.54 17.93 40.39 5.01
3595 5142 2.679996 TGAGAGCTAGGCGCCACA 60.680 61.111 31.54 15.42 40.39 4.17
3596 5143 2.202810 GAGAGCTAGGCGCCACAC 60.203 66.667 31.54 17.11 40.39 3.82
3597 5144 2.681778 AGAGCTAGGCGCCACACT 60.682 61.111 31.54 21.99 40.39 3.55
3598 5145 1.379977 AGAGCTAGGCGCCACACTA 60.380 57.895 31.54 11.42 40.39 2.74
3599 5146 1.227002 GAGCTAGGCGCCACACTAC 60.227 63.158 31.54 11.53 40.39 2.73
3600 5147 1.945354 GAGCTAGGCGCCACACTACA 61.945 60.000 31.54 2.99 40.39 2.74
3601 5148 1.810030 GCTAGGCGCCACACTACAC 60.810 63.158 31.54 4.76 0.00 2.90
3602 5149 1.589630 CTAGGCGCCACACTACACA 59.410 57.895 31.54 0.33 0.00 3.72
3603 5150 0.458543 CTAGGCGCCACACTACACAG 60.459 60.000 31.54 6.91 0.00 3.66
3604 5151 1.183030 TAGGCGCCACACTACACAGT 61.183 55.000 31.54 5.27 34.42 3.55
3611 5158 2.856032 CACTACACAGTGCAGCGC 59.144 61.111 0.00 0.00 45.44 5.92
3612 5159 2.357517 ACTACACAGTGCAGCGCC 60.358 61.111 2.29 0.00 32.25 6.53
3613 5160 2.047844 CTACACAGTGCAGCGCCT 60.048 61.111 2.29 0.00 0.00 5.52
3614 5161 1.215382 CTACACAGTGCAGCGCCTA 59.785 57.895 2.29 0.00 0.00 3.93
3615 5162 0.803768 CTACACAGTGCAGCGCCTAG 60.804 60.000 2.29 0.00 0.00 3.02
3628 5175 2.187946 CCTAGCTCCTGGGCGTTG 59.812 66.667 0.00 0.00 37.29 4.10
3629 5176 2.512515 CTAGCTCCTGGGCGTTGC 60.513 66.667 0.00 0.00 37.29 4.17
3630 5177 3.315142 CTAGCTCCTGGGCGTTGCA 62.315 63.158 0.00 0.00 37.29 4.08
3631 5178 3.605749 TAGCTCCTGGGCGTTGCAC 62.606 63.158 0.00 0.00 37.29 4.57
3633 5180 2.662596 CTCCTGGGCGTTGCACTA 59.337 61.111 0.00 0.00 30.56 2.74
3634 5181 1.448540 CTCCTGGGCGTTGCACTAG 60.449 63.158 0.00 0.00 30.56 2.57
3635 5182 2.172483 CTCCTGGGCGTTGCACTAGT 62.172 60.000 0.00 0.00 30.56 2.57
3636 5183 2.034879 CCTGGGCGTTGCACTAGTG 61.035 63.158 18.93 18.93 30.56 2.74
3646 5193 2.262603 CACTAGTGCAGCGCCTGA 59.737 61.111 10.54 0.00 32.44 3.86
3647 5194 1.808799 CACTAGTGCAGCGCCTGAG 60.809 63.158 10.54 0.34 32.44 3.35
3648 5195 1.979155 ACTAGTGCAGCGCCTGAGA 60.979 57.895 2.29 0.00 32.44 3.27
3649 5196 1.226916 CTAGTGCAGCGCCTGAGAG 60.227 63.158 2.29 0.00 32.44 3.20
3650 5197 1.943116 CTAGTGCAGCGCCTGAGAGT 61.943 60.000 2.29 0.00 32.44 3.24
3651 5198 1.536073 TAGTGCAGCGCCTGAGAGTT 61.536 55.000 2.29 0.00 32.44 3.01
3652 5199 1.079819 GTGCAGCGCCTGAGAGTTA 60.080 57.895 2.29 0.00 32.44 2.24
3653 5200 1.080995 GTGCAGCGCCTGAGAGTTAG 61.081 60.000 2.29 0.00 32.44 2.34
3654 5201 1.520342 GCAGCGCCTGAGAGTTAGG 60.520 63.158 2.29 0.00 38.39 2.69
3659 5206 3.298958 CCTGAGAGTTAGGCGCCA 58.701 61.111 31.54 12.31 0.00 5.69
3660 5207 1.153549 CCTGAGAGTTAGGCGCCAC 60.154 63.158 31.54 19.69 0.00 5.01
3661 5208 1.153549 CTGAGAGTTAGGCGCCACC 60.154 63.158 31.54 15.77 39.61 4.61
3662 5209 2.202756 GAGAGTTAGGCGCCACCG 60.203 66.667 31.54 0.00 46.52 4.94
3673 5220 3.884900 GCCACCGCGTGAAATAGT 58.115 55.556 4.92 0.00 35.23 2.12
3674 5221 2.168054 GCCACCGCGTGAAATAGTT 58.832 52.632 4.92 0.00 35.23 2.24
3675 5222 0.519961 GCCACCGCGTGAAATAGTTT 59.480 50.000 4.92 0.00 35.23 2.66
3676 5223 1.068816 GCCACCGCGTGAAATAGTTTT 60.069 47.619 4.92 0.00 35.23 2.43
3677 5224 2.160022 GCCACCGCGTGAAATAGTTTTA 59.840 45.455 4.92 0.00 35.23 1.52
3678 5225 3.726782 GCCACCGCGTGAAATAGTTTTAG 60.727 47.826 4.92 0.00 35.23 1.85
3679 5226 3.181514 CCACCGCGTGAAATAGTTTTAGG 60.182 47.826 4.92 0.00 35.23 2.69
3680 5227 3.004862 ACCGCGTGAAATAGTTTTAGGG 58.995 45.455 4.92 0.00 0.00 3.53
3681 5228 3.264104 CCGCGTGAAATAGTTTTAGGGA 58.736 45.455 4.92 0.00 0.00 4.20
3682 5229 3.063045 CCGCGTGAAATAGTTTTAGGGAC 59.937 47.826 4.92 0.00 0.00 4.46
3683 5230 3.680937 CGCGTGAAATAGTTTTAGGGACA 59.319 43.478 0.00 0.00 0.00 4.02
3684 5231 4.201685 CGCGTGAAATAGTTTTAGGGACAG 60.202 45.833 0.00 0.00 0.00 3.51
3685 5232 4.694037 GCGTGAAATAGTTTTAGGGACAGT 59.306 41.667 0.00 0.00 0.00 3.55
3686 5233 5.180680 GCGTGAAATAGTTTTAGGGACAGTT 59.819 40.000 0.00 0.00 0.00 3.16
3687 5234 6.293790 GCGTGAAATAGTTTTAGGGACAGTTT 60.294 38.462 0.00 0.00 0.00 2.66
3688 5235 7.095102 GCGTGAAATAGTTTTAGGGACAGTTTA 60.095 37.037 0.00 0.00 0.00 2.01
3689 5236 8.943002 CGTGAAATAGTTTTAGGGACAGTTTAT 58.057 33.333 0.00 0.00 0.00 1.40
3697 5244 9.975218 AGTTTTAGGGACAGTTTATTATGTGAT 57.025 29.630 0.00 0.00 0.00 3.06
3701 5248 9.967451 TTAGGGACAGTTTATTATGTGATTTGA 57.033 29.630 0.00 0.00 0.00 2.69
3703 5250 9.479549 AGGGACAGTTTATTATGTGATTTGATT 57.520 29.630 0.00 0.00 0.00 2.57
3717 5264 8.956533 TGTGATTTGATTTCGATTATAGGTCA 57.043 30.769 0.00 0.00 0.00 4.02
3718 5265 9.389755 TGTGATTTGATTTCGATTATAGGTCAA 57.610 29.630 0.00 0.00 0.00 3.18
3760 5307 5.294552 ACAACAGCTCACTTTTTACTCTGAC 59.705 40.000 0.00 0.00 0.00 3.51
3763 5310 3.075148 GCTCACTTTTTACTCTGACCCC 58.925 50.000 0.00 0.00 0.00 4.95
3764 5311 3.244596 GCTCACTTTTTACTCTGACCCCT 60.245 47.826 0.00 0.00 0.00 4.79
3765 5312 4.319177 CTCACTTTTTACTCTGACCCCTG 58.681 47.826 0.00 0.00 0.00 4.45
3766 5313 2.814336 CACTTTTTACTCTGACCCCTGC 59.186 50.000 0.00 0.00 0.00 4.85
3767 5314 2.441750 ACTTTTTACTCTGACCCCTGCA 59.558 45.455 0.00 0.00 0.00 4.41
3783 5330 0.171679 TGCAAAATCTCCTGCGCATG 59.828 50.000 12.24 8.91 41.63 4.06
3798 5345 1.201812 CGCATGAACAGTAACTCGCAC 60.202 52.381 0.00 0.00 0.00 5.34
3837 5384 1.672854 CGGACAGGATAAGCGGGTGA 61.673 60.000 0.00 0.00 0.00 4.02
3869 5416 2.030562 CCTGTCGCACCTTTCCGT 59.969 61.111 0.00 0.00 0.00 4.69
3870 5417 1.597027 CCTGTCGCACCTTTCCGTT 60.597 57.895 0.00 0.00 0.00 4.44
3871 5418 0.320073 CCTGTCGCACCTTTCCGTTA 60.320 55.000 0.00 0.00 0.00 3.18
3872 5419 1.068474 CTGTCGCACCTTTCCGTTAG 58.932 55.000 0.00 0.00 0.00 2.34
3873 5420 0.947180 TGTCGCACCTTTCCGTTAGC 60.947 55.000 0.00 0.00 0.00 3.09
3874 5421 0.669625 GTCGCACCTTTCCGTTAGCT 60.670 55.000 0.00 0.00 0.00 3.32
3875 5422 0.889994 TCGCACCTTTCCGTTAGCTA 59.110 50.000 0.00 0.00 0.00 3.32
3876 5423 1.479323 TCGCACCTTTCCGTTAGCTAT 59.521 47.619 0.00 0.00 0.00 2.97
3877 5424 2.689471 TCGCACCTTTCCGTTAGCTATA 59.311 45.455 0.00 0.00 0.00 1.31
3963 5510 0.392336 GGCTTGTTTTGGCATGGACA 59.608 50.000 0.00 0.00 0.00 4.02
3981 5528 3.120060 GGACAATGTCACAGCTCATGAAC 60.120 47.826 15.86 0.00 33.68 3.18
4021 5568 2.105930 CGCAGCTAGAGGTCAGGC 59.894 66.667 0.00 0.00 0.00 4.85
4045 5592 3.873952 GGTGCTAGGACAAGATAAAGCTG 59.126 47.826 16.81 0.00 0.00 4.24
4079 5627 1.609208 CACCCCTTGTTGAACTCCAG 58.391 55.000 0.00 0.00 0.00 3.86
4202 5750 8.807948 ACATTCTTAAAGGCACAACTGTATAT 57.192 30.769 0.00 0.00 0.00 0.86
4367 5915 2.912956 TCCTGGGATGTTGTTTAGCTCT 59.087 45.455 0.00 0.00 0.00 4.09
4625 6173 8.815565 TTATGCATTAGAATAAGGGAAACACA 57.184 30.769 3.54 0.00 0.00 3.72
4626 6174 6.757897 TGCATTAGAATAAGGGAAACACAG 57.242 37.500 0.00 0.00 0.00 3.66
4656 6204 7.392494 AGAACAACATCTTCTATCTACGTGA 57.608 36.000 0.00 0.00 0.00 4.35
4657 6205 8.001881 AGAACAACATCTTCTATCTACGTGAT 57.998 34.615 0.00 1.82 39.11 3.06
4658 6206 9.121658 AGAACAACATCTTCTATCTACGTGATA 57.878 33.333 0.00 3.00 36.65 2.15
4659 6207 9.171701 GAACAACATCTTCTATCTACGTGATAC 57.828 37.037 0.00 0.00 36.65 2.24
4660 6208 7.649973 ACAACATCTTCTATCTACGTGATACC 58.350 38.462 0.00 0.00 36.65 2.73
4661 6209 7.284716 ACAACATCTTCTATCTACGTGATACCA 59.715 37.037 0.00 0.00 36.65 3.25
4662 6210 8.300286 CAACATCTTCTATCTACGTGATACCAT 58.700 37.037 0.00 0.00 36.65 3.55
4663 6211 8.046294 ACATCTTCTATCTACGTGATACCATC 57.954 38.462 0.00 0.00 36.65 3.51
4664 6212 7.885922 ACATCTTCTATCTACGTGATACCATCT 59.114 37.037 0.00 0.00 36.65 2.90
4665 6213 7.674471 TCTTCTATCTACGTGATACCATCTG 57.326 40.000 0.00 0.00 36.65 2.90
4666 6214 7.450903 TCTTCTATCTACGTGATACCATCTGA 58.549 38.462 0.00 0.00 36.65 3.27
4667 6215 7.604545 TCTTCTATCTACGTGATACCATCTGAG 59.395 40.741 0.00 0.00 36.65 3.35
4668 6216 6.174049 TCTATCTACGTGATACCATCTGAGG 58.826 44.000 0.00 0.00 36.65 3.86
4669 6217 2.885266 TCTACGTGATACCATCTGAGGC 59.115 50.000 0.00 0.00 0.00 4.70
4670 6218 1.781786 ACGTGATACCATCTGAGGCT 58.218 50.000 0.00 0.00 0.00 4.58
4671 6219 2.945456 ACGTGATACCATCTGAGGCTA 58.055 47.619 0.00 0.00 0.00 3.93
4672 6220 3.501349 ACGTGATACCATCTGAGGCTAT 58.499 45.455 0.00 0.00 0.00 2.97
4673 6221 4.663334 ACGTGATACCATCTGAGGCTATA 58.337 43.478 0.00 0.00 0.00 1.31
4678 6226 6.379703 GTGATACCATCTGAGGCTATAGTCAT 59.620 42.308 7.19 0.00 0.00 3.06
4728 6277 6.765036 TGCCTTTGAAATGTTGAATAAAGCAA 59.235 30.769 0.00 0.00 0.00 3.91
4776 6326 7.433708 TGGTACAAATACAAGATTCACACAG 57.566 36.000 0.00 0.00 31.92 3.66
4777 6327 6.995686 TGGTACAAATACAAGATTCACACAGT 59.004 34.615 0.00 0.00 31.92 3.55
4795 6345 2.079158 AGTGTTGAGAACATGCATCGG 58.921 47.619 0.00 0.00 44.35 4.18
4813 6363 1.534729 GGGCACAGTTTTAGAGGGTG 58.465 55.000 0.00 0.00 0.00 4.61
4826 6376 1.305381 AGGGTGGAGGAAGGTCTCG 60.305 63.158 0.00 0.00 34.74 4.04
4830 6380 0.974383 GTGGAGGAAGGTCTCGGAAA 59.026 55.000 0.00 0.00 34.74 3.13
4831 6381 1.346722 GTGGAGGAAGGTCTCGGAAAA 59.653 52.381 0.00 0.00 34.74 2.29
4832 6382 2.051692 TGGAGGAAGGTCTCGGAAAAA 58.948 47.619 0.00 0.00 34.74 1.94
4852 6402 5.938438 AAAAGCAAATGTGTGTTGTTTGT 57.062 30.435 0.00 0.00 35.75 2.83
4853 6403 4.925061 AAGCAAATGTGTGTTGTTTGTG 57.075 36.364 0.00 0.00 35.75 3.33
4854 6404 3.260740 AGCAAATGTGTGTTGTTTGTGG 58.739 40.909 0.00 0.00 35.75 4.17
4855 6405 3.056250 AGCAAATGTGTGTTGTTTGTGGA 60.056 39.130 0.00 0.00 35.75 4.02
4856 6406 3.306703 GCAAATGTGTGTTGTTTGTGGAG 59.693 43.478 0.00 0.00 35.75 3.86
4857 6407 3.799281 AATGTGTGTTGTTTGTGGAGG 57.201 42.857 0.00 0.00 0.00 4.30
4858 6408 1.468985 TGTGTGTTGTTTGTGGAGGG 58.531 50.000 0.00 0.00 0.00 4.30
4859 6409 0.744281 GTGTGTTGTTTGTGGAGGGG 59.256 55.000 0.00 0.00 0.00 4.79
4860 6410 0.396417 TGTGTTGTTTGTGGAGGGGG 60.396 55.000 0.00 0.00 0.00 5.40
4861 6411 0.396556 GTGTTGTTTGTGGAGGGGGT 60.397 55.000 0.00 0.00 0.00 4.95
4862 6412 0.396417 TGTTGTTTGTGGAGGGGGTG 60.396 55.000 0.00 0.00 0.00 4.61
4863 6413 1.112916 GTTGTTTGTGGAGGGGGTGG 61.113 60.000 0.00 0.00 0.00 4.61
4864 6414 2.117423 GTTTGTGGAGGGGGTGGG 59.883 66.667 0.00 0.00 0.00 4.61
4865 6415 3.189646 TTTGTGGAGGGGGTGGGG 61.190 66.667 0.00 0.00 0.00 4.96
4866 6416 4.542627 TTGTGGAGGGGGTGGGGT 62.543 66.667 0.00 0.00 0.00 4.95
4867 6417 4.542627 TGTGGAGGGGGTGGGGTT 62.543 66.667 0.00 0.00 0.00 4.11
4868 6418 3.979497 GTGGAGGGGGTGGGGTTG 61.979 72.222 0.00 0.00 0.00 3.77
4869 6419 4.209620 TGGAGGGGGTGGGGTTGA 62.210 66.667 0.00 0.00 0.00 3.18
4870 6420 2.861974 GGAGGGGGTGGGGTTGAA 60.862 66.667 0.00 0.00 0.00 2.69
4871 6421 2.475172 GGAGGGGGTGGGGTTGAAA 61.475 63.158 0.00 0.00 0.00 2.69
4872 6422 1.076727 GAGGGGGTGGGGTTGAAAG 59.923 63.158 0.00 0.00 0.00 2.62
4873 6423 1.388217 AGGGGGTGGGGTTGAAAGA 60.388 57.895 0.00 0.00 0.00 2.52
4874 6424 0.780090 AGGGGGTGGGGTTGAAAGAT 60.780 55.000 0.00 0.00 0.00 2.40
4875 6425 0.614697 GGGGGTGGGGTTGAAAGATG 60.615 60.000 0.00 0.00 0.00 2.90
4876 6426 0.614697 GGGGTGGGGTTGAAAGATGG 60.615 60.000 0.00 0.00 0.00 3.51
4877 6427 0.407918 GGGTGGGGTTGAAAGATGGA 59.592 55.000 0.00 0.00 0.00 3.41
4878 6428 1.203125 GGGTGGGGTTGAAAGATGGAA 60.203 52.381 0.00 0.00 0.00 3.53
4879 6429 2.604139 GGTGGGGTTGAAAGATGGAAA 58.396 47.619 0.00 0.00 0.00 3.13
4880 6430 3.173151 GGTGGGGTTGAAAGATGGAAAT 58.827 45.455 0.00 0.00 0.00 2.17
4881 6431 4.349365 GGTGGGGTTGAAAGATGGAAATA 58.651 43.478 0.00 0.00 0.00 1.40
4882 6432 4.962362 GGTGGGGTTGAAAGATGGAAATAT 59.038 41.667 0.00 0.00 0.00 1.28
4883 6433 5.163416 GGTGGGGTTGAAAGATGGAAATATG 60.163 44.000 0.00 0.00 0.00 1.78
4884 6434 5.422012 GTGGGGTTGAAAGATGGAAATATGT 59.578 40.000 0.00 0.00 0.00 2.29
4885 6435 5.421693 TGGGGTTGAAAGATGGAAATATGTG 59.578 40.000 0.00 0.00 0.00 3.21
4886 6436 5.422012 GGGGTTGAAAGATGGAAATATGTGT 59.578 40.000 0.00 0.00 0.00 3.72
4887 6437 6.332630 GGGTTGAAAGATGGAAATATGTGTG 58.667 40.000 0.00 0.00 0.00 3.82
4888 6438 6.332630 GGTTGAAAGATGGAAATATGTGTGG 58.667 40.000 0.00 0.00 0.00 4.17
4889 6439 6.071391 GGTTGAAAGATGGAAATATGTGTGGT 60.071 38.462 0.00 0.00 0.00 4.16
4890 6440 7.378181 GTTGAAAGATGGAAATATGTGTGGTT 58.622 34.615 0.00 0.00 0.00 3.67
4891 6441 6.923012 TGAAAGATGGAAATATGTGTGGTTG 58.077 36.000 0.00 0.00 0.00 3.77
4892 6442 5.920193 AAGATGGAAATATGTGTGGTTGG 57.080 39.130 0.00 0.00 0.00 3.77
4893 6443 5.191727 AGATGGAAATATGTGTGGTTGGA 57.808 39.130 0.00 0.00 0.00 3.53
4894 6444 5.195940 AGATGGAAATATGTGTGGTTGGAG 58.804 41.667 0.00 0.00 0.00 3.86
4895 6445 3.696045 TGGAAATATGTGTGGTTGGAGG 58.304 45.455 0.00 0.00 0.00 4.30
4896 6446 3.332187 TGGAAATATGTGTGGTTGGAGGA 59.668 43.478 0.00 0.00 0.00 3.71
4897 6447 3.947834 GGAAATATGTGTGGTTGGAGGAG 59.052 47.826 0.00 0.00 0.00 3.69
4898 6448 3.652057 AATATGTGTGGTTGGAGGAGG 57.348 47.619 0.00 0.00 0.00 4.30
4899 6449 1.285280 TATGTGTGGTTGGAGGAGGG 58.715 55.000 0.00 0.00 0.00 4.30
4900 6450 1.500783 ATGTGTGGTTGGAGGAGGGG 61.501 60.000 0.00 0.00 0.00 4.79
4901 6451 2.531685 TGTGGTTGGAGGAGGGGG 60.532 66.667 0.00 0.00 0.00 5.40
4902 6452 2.531942 GTGGTTGGAGGAGGGGGT 60.532 66.667 0.00 0.00 0.00 4.95
4903 6453 1.229723 GTGGTTGGAGGAGGGGGTA 60.230 63.158 0.00 0.00 0.00 3.69
4904 6454 1.229723 TGGTTGGAGGAGGGGGTAC 60.230 63.158 0.00 0.00 0.00 3.34
4905 6455 1.229723 GGTTGGAGGAGGGGGTACA 60.230 63.158 0.00 0.00 0.00 2.90
4906 6456 0.623617 GGTTGGAGGAGGGGGTACAT 60.624 60.000 0.00 0.00 0.00 2.29
4907 6457 0.837940 GTTGGAGGAGGGGGTACATC 59.162 60.000 0.00 0.00 0.00 3.06
4908 6458 0.689745 TTGGAGGAGGGGGTACATCG 60.690 60.000 0.00 0.00 0.00 3.84
4909 6459 2.508751 GGAGGAGGGGGTACATCGC 61.509 68.421 0.00 0.00 0.00 4.58
4929 6479 0.450184 ACGTGTTGTGCAAGGAACAC 59.550 50.000 20.17 20.17 45.60 3.32
4987 6537 3.058501 GTGTTTCTAAACCATGTGGACCG 60.059 47.826 5.96 0.00 38.11 4.79
4996 6546 1.209504 CCATGTGGACCGGAACTATGT 59.790 52.381 9.46 0.00 37.39 2.29
5041 6591 1.236616 TGGCGCACATGGTCAGAAAG 61.237 55.000 10.83 0.00 0.00 2.62
5066 6616 1.884075 AACATGTGCGACTAGGCGGA 61.884 55.000 21.78 15.87 35.06 5.54
5080 6630 1.663388 GCGGACATCACACACGTCA 60.663 57.895 0.00 0.00 0.00 4.35
5082 6632 1.282248 CGGACATCACACACGTCACC 61.282 60.000 0.00 0.00 0.00 4.02
5110 6660 6.573434 AGAATAATTGTGTGCGATGTAGAGA 58.427 36.000 0.00 0.00 0.00 3.10
5168 6718 5.163488 CCATGTGCAACTCAATGACCATTAT 60.163 40.000 0.00 0.00 38.04 1.28
5269 6862 3.495331 AGCACCATATGAACAACACCAA 58.505 40.909 3.65 0.00 0.00 3.67
5314 7109 4.271776 ACAAGTAACAAAACGGTAGCACTC 59.728 41.667 0.00 0.00 0.00 3.51
5393 7188 1.909700 TTGTTTCCTCCTGGATGTGC 58.090 50.000 0.00 0.00 42.81 4.57
5425 7220 1.565288 TGATGATCACATGCCCCTCAA 59.435 47.619 0.00 0.00 36.82 3.02
5430 7225 3.196039 TGATCACATGCCCCTCAATTTTG 59.804 43.478 0.00 0.00 0.00 2.44
5465 7260 5.759059 AGGGACTTCAAAATCAGCATCATA 58.241 37.500 0.00 0.00 27.25 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
129 130 2.450160 GTCAAGCACAAGTTTTCACCG 58.550 47.619 0.00 0.00 0.00 4.94
227 228 1.069668 CCTATTACTACACACCGCCCC 59.930 57.143 0.00 0.00 0.00 5.80
236 239 4.223477 AGCACCGGAAAACCTATTACTACA 59.777 41.667 9.46 0.00 0.00 2.74
279 282 5.297527 TCGCTACATTTCTCATAGGTTCGTA 59.702 40.000 0.00 0.00 0.00 3.43
280 283 4.097437 TCGCTACATTTCTCATAGGTTCGT 59.903 41.667 0.00 0.00 0.00 3.85
739 752 1.475280 GTGTGCATGCAGATTGTGGAT 59.525 47.619 23.41 0.00 37.81 3.41
757 770 4.436523 GGTCAAACTTTCGTTCAATTCGTG 59.563 41.667 0.00 0.00 31.66 4.35
766 779 2.546789 CGCTAAGGGTCAAACTTTCGTT 59.453 45.455 0.00 0.00 34.03 3.85
788 801 0.974383 CGGAGGGAGTAGTTTGTGGT 59.026 55.000 0.00 0.00 0.00 4.16
861 1009 1.452108 CCTTGGTCGGCAAGGGATC 60.452 63.158 9.55 0.00 44.02 3.36
1176 1336 2.415010 CGGCGAGATAGCTGTGCT 59.585 61.111 0.00 0.00 43.41 4.40
1177 1337 2.071844 TACCGGCGAGATAGCTGTGC 62.072 60.000 9.30 0.00 41.72 4.57
1905 3056 6.384224 TGTGTGTACGGTCTATGAGTTAAAG 58.616 40.000 0.00 0.00 0.00 1.85
1921 3244 1.087771 GCCGGCAGGTATGTGTGTAC 61.088 60.000 24.80 0.00 40.50 2.90
1940 3264 1.901591 AGGTGAACAGAACAGCATGG 58.098 50.000 0.00 0.00 43.62 3.66
1970 3313 1.070309 CCGATAGCAGCAAATCGAAGC 60.070 52.381 24.28 0.00 46.08 3.86
1973 3316 0.104855 AGCCGATAGCAGCAAATCGA 59.895 50.000 24.28 0.00 46.08 3.59
2004 3347 3.897122 TGGGTGGTGGGCAACTCC 61.897 66.667 0.00 0.00 0.00 3.85
2008 3351 0.468400 GTTAAGTGGGTGGTGGGCAA 60.468 55.000 0.00 0.00 0.00 4.52
2220 3583 4.699637 ACGAACTGAGGTTGTATTTGTGA 58.300 39.130 0.00 0.00 35.58 3.58
2241 3604 7.095271 ACACTTTCTAGAGAGTCGTGTACTTAC 60.095 40.741 12.82 0.00 39.07 2.34
2248 3611 4.491234 ACACACTTTCTAGAGAGTCGTG 57.509 45.455 26.37 26.37 34.29 4.35
2369 3737 4.328536 TGCCATATGTTTACGGAACTGTT 58.671 39.130 1.24 0.00 39.08 3.16
2370 3738 3.945346 TGCCATATGTTTACGGAACTGT 58.055 40.909 1.24 0.00 39.08 3.55
2371 3739 4.955925 TTGCCATATGTTTACGGAACTG 57.044 40.909 1.24 0.00 39.08 3.16
2372 3740 5.968528 TTTTGCCATATGTTTACGGAACT 57.031 34.783 1.24 0.00 39.08 3.01
2373 3741 8.865590 AATATTTTGCCATATGTTTACGGAAC 57.134 30.769 1.24 0.00 38.78 3.62
2374 3742 9.953697 GTAATATTTTGCCATATGTTTACGGAA 57.046 29.630 1.24 0.00 0.00 4.30
2375 3743 9.344772 AGTAATATTTTGCCATATGTTTACGGA 57.655 29.630 1.24 0.00 0.00 4.69
2452 3862 8.617290 TGGAAATACTCCTTCTCTTTGTAAAC 57.383 34.615 0.00 0.00 45.64 2.01
2551 3961 9.605275 TTGATTCTCATAGAAGATCGAACAATT 57.395 29.630 0.00 0.00 37.69 2.32
2559 3969 9.598517 AAGACAACTTGATTCTCATAGAAGATC 57.401 33.333 0.00 0.00 34.80 2.75
2565 3975 6.648192 AGGGAAGACAACTTGATTCTCATAG 58.352 40.000 11.47 0.00 36.39 2.23
2566 3976 6.627087 AGGGAAGACAACTTGATTCTCATA 57.373 37.500 11.47 0.00 36.39 2.15
2567 3977 5.511386 AGGGAAGACAACTTGATTCTCAT 57.489 39.130 11.47 0.98 36.39 2.90
2602 4012 7.493971 GTCTAGTCTATGTCGACACTAAAGGTA 59.506 40.741 22.71 6.50 36.38 3.08
2709 4123 7.256190 CCCGGTACTGAAAATCCATTCTCTATA 60.256 40.741 2.31 0.00 0.00 1.31
2748 4163 3.432933 TGAACGTACGGTTTTGATAAGGC 59.567 43.478 21.06 0.00 39.50 4.35
2750 4165 6.456447 TTCTGAACGTACGGTTTTGATAAG 57.544 37.500 21.06 3.89 39.50 1.73
2762 4177 6.489675 TCTATACGGTGAATTCTGAACGTAC 58.510 40.000 15.76 0.55 39.23 3.67
3023 4561 6.772233 TCTCCATTTTTCTGTCACATCTTCAA 59.228 34.615 0.00 0.00 0.00 2.69
3060 4599 1.845266 AGTTCTCTGTCATATGCGCG 58.155 50.000 0.00 0.00 0.00 6.86
3126 4668 4.442706 TGGTTTCTCTCTCACAAGTGTTC 58.557 43.478 0.00 0.00 0.00 3.18
3187 4729 0.803117 TTTCGCCACGTGTTGTTCAA 59.197 45.000 15.65 0.00 0.00 2.69
3219 4761 3.502455 CGTGCATGCGACTGCCAT 61.502 61.111 14.09 0.00 41.58 4.40
3222 4764 4.511443 GAGCGTGCATGCGACTGC 62.511 66.667 24.51 17.32 42.62 4.40
3223 4765 0.873312 ATAGAGCGTGCATGCGACTG 60.873 55.000 29.67 9.67 40.67 3.51
3344 4891 5.884792 TCAAAATTGTCAAATTTGCCCTGTT 59.115 32.000 17.69 2.38 43.63 3.16
3345 4892 5.296531 GTCAAAATTGTCAAATTTGCCCTGT 59.703 36.000 17.69 0.00 43.63 4.00
3346 4893 5.528320 AGTCAAAATTGTCAAATTTGCCCTG 59.472 36.000 17.69 4.13 43.63 4.45
3347 4894 5.683681 AGTCAAAATTGTCAAATTTGCCCT 58.316 33.333 17.69 13.54 43.63 5.19
3348 4895 6.375945 AAGTCAAAATTGTCAAATTTGCCC 57.624 33.333 17.69 11.97 43.63 5.36
3373 4920 9.773328 GTTCATTCTGTGATTTGATTTCGATTA 57.227 29.630 0.00 0.00 36.54 1.75
3374 4921 8.517878 AGTTCATTCTGTGATTTGATTTCGATT 58.482 29.630 0.00 0.00 36.54 3.34
3375 4922 7.966753 CAGTTCATTCTGTGATTTGATTTCGAT 59.033 33.333 0.00 0.00 36.54 3.59
3376 4923 7.300320 CAGTTCATTCTGTGATTTGATTTCGA 58.700 34.615 0.00 0.00 36.54 3.71
3377 4924 6.525628 CCAGTTCATTCTGTGATTTGATTTCG 59.474 38.462 0.00 0.00 36.54 3.46
3378 4925 7.373493 ACCAGTTCATTCTGTGATTTGATTTC 58.627 34.615 0.00 0.00 36.54 2.17
3379 4926 7.294017 ACCAGTTCATTCTGTGATTTGATTT 57.706 32.000 0.00 0.00 36.54 2.17
3380 4927 6.906157 ACCAGTTCATTCTGTGATTTGATT 57.094 33.333 0.00 0.00 36.54 2.57
3381 4928 6.684686 CAACCAGTTCATTCTGTGATTTGAT 58.315 36.000 0.00 0.00 36.54 2.57
3382 4929 5.507817 GCAACCAGTTCATTCTGTGATTTGA 60.508 40.000 0.00 0.00 36.54 2.69
3383 4930 4.682860 GCAACCAGTTCATTCTGTGATTTG 59.317 41.667 0.00 0.00 36.54 2.32
3384 4931 4.557296 CGCAACCAGTTCATTCTGTGATTT 60.557 41.667 0.00 0.00 36.54 2.17
3385 4932 3.058016 CGCAACCAGTTCATTCTGTGATT 60.058 43.478 0.00 0.00 36.54 2.57
3386 4933 2.485426 CGCAACCAGTTCATTCTGTGAT 59.515 45.455 0.00 0.00 36.54 3.06
3387 4934 1.872952 CGCAACCAGTTCATTCTGTGA 59.127 47.619 0.00 0.00 34.02 3.58
3388 4935 1.872952 TCGCAACCAGTTCATTCTGTG 59.127 47.619 0.00 0.00 34.02 3.66
3389 4936 2.254546 TCGCAACCAGTTCATTCTGT 57.745 45.000 0.00 0.00 34.02 3.41
3390 4937 3.003689 AGTTTCGCAACCAGTTCATTCTG 59.996 43.478 0.00 0.00 32.70 3.02
3391 4938 3.214328 AGTTTCGCAACCAGTTCATTCT 58.786 40.909 0.00 0.00 32.70 2.40
3392 4939 3.626028 AGTTTCGCAACCAGTTCATTC 57.374 42.857 0.00 0.00 32.70 2.67
3393 4940 5.705609 AATAGTTTCGCAACCAGTTCATT 57.294 34.783 0.00 0.00 32.70 2.57
3394 4941 5.240623 TGAAATAGTTTCGCAACCAGTTCAT 59.759 36.000 5.34 0.00 42.55 2.57
3395 4942 4.576873 TGAAATAGTTTCGCAACCAGTTCA 59.423 37.500 5.34 5.34 42.55 3.18
3396 4943 4.909880 GTGAAATAGTTTCGCAACCAGTTC 59.090 41.667 10.21 0.41 46.56 3.01
3397 4944 4.855531 GTGAAATAGTTTCGCAACCAGTT 58.144 39.130 10.21 0.00 46.56 3.16
3398 4945 4.483476 GTGAAATAGTTTCGCAACCAGT 57.517 40.909 10.21 0.00 46.56 4.00
3406 4953 4.392138 GGTCAGGGAAGTGAAATAGTTTCG 59.608 45.833 0.00 0.00 42.55 3.46
3407 4954 4.700692 GGGTCAGGGAAGTGAAATAGTTTC 59.299 45.833 0.00 0.00 40.08 2.78
3408 4955 4.354087 AGGGTCAGGGAAGTGAAATAGTTT 59.646 41.667 0.00 0.00 0.00 2.66
3409 4956 3.916989 AGGGTCAGGGAAGTGAAATAGTT 59.083 43.478 0.00 0.00 0.00 2.24
3410 4957 3.532102 AGGGTCAGGGAAGTGAAATAGT 58.468 45.455 0.00 0.00 0.00 2.12
3411 4958 4.576330 AAGGGTCAGGGAAGTGAAATAG 57.424 45.455 0.00 0.00 0.00 1.73
3412 4959 5.076873 CAAAAGGGTCAGGGAAGTGAAATA 58.923 41.667 0.00 0.00 0.00 1.40
3413 4960 3.897505 CAAAAGGGTCAGGGAAGTGAAAT 59.102 43.478 0.00 0.00 0.00 2.17
3414 4961 3.295973 CAAAAGGGTCAGGGAAGTGAAA 58.704 45.455 0.00 0.00 0.00 2.69
3415 4962 2.243736 ACAAAAGGGTCAGGGAAGTGAA 59.756 45.455 0.00 0.00 0.00 3.18
3416 4963 1.850345 ACAAAAGGGTCAGGGAAGTGA 59.150 47.619 0.00 0.00 0.00 3.41
3417 4964 1.956477 CACAAAAGGGTCAGGGAAGTG 59.044 52.381 0.00 0.00 0.00 3.16
3418 4965 1.569072 ACACAAAAGGGTCAGGGAAGT 59.431 47.619 0.00 0.00 0.00 3.01
3419 4966 2.364972 ACACAAAAGGGTCAGGGAAG 57.635 50.000 0.00 0.00 0.00 3.46
3420 4967 2.488347 GCTACACAAAAGGGTCAGGGAA 60.488 50.000 0.00 0.00 0.00 3.97
3421 4968 1.073284 GCTACACAAAAGGGTCAGGGA 59.927 52.381 0.00 0.00 0.00 4.20
3422 4969 1.534729 GCTACACAAAAGGGTCAGGG 58.465 55.000 0.00 0.00 0.00 4.45
3423 4970 1.156736 CGCTACACAAAAGGGTCAGG 58.843 55.000 0.00 0.00 0.00 3.86
3424 4971 0.517316 GCGCTACACAAAAGGGTCAG 59.483 55.000 0.00 0.00 0.00 3.51
3425 4972 0.887387 GGCGCTACACAAAAGGGTCA 60.887 55.000 7.64 0.00 32.25 4.02
3426 4973 1.583495 GGGCGCTACACAAAAGGGTC 61.583 60.000 7.64 0.00 0.00 4.46
3427 4974 1.602605 GGGCGCTACACAAAAGGGT 60.603 57.895 7.64 0.00 0.00 4.34
3428 4975 2.686816 CGGGCGCTACACAAAAGGG 61.687 63.158 7.64 0.00 0.00 3.95
3429 4976 2.867472 CGGGCGCTACACAAAAGG 59.133 61.111 7.64 0.00 0.00 3.11
3430 4977 2.175811 GCGGGCGCTACACAAAAG 59.824 61.111 7.64 0.00 38.26 2.27
3431 4978 3.358707 GGCGGGCGCTACACAAAA 61.359 61.111 7.64 0.00 41.60 2.44
3432 4979 4.627801 TGGCGGGCGCTACACAAA 62.628 61.111 7.64 0.00 41.60 2.83
3454 5001 4.016706 ACAGTAGGGTGTGGCGCC 62.017 66.667 22.73 22.73 0.00 6.53
3455 5002 2.742372 CACAGTAGGGTGTGGCGC 60.742 66.667 0.00 0.00 43.56 6.53
3456 5003 2.742372 GCACAGTAGGGTGTGGCG 60.742 66.667 6.16 0.00 46.73 5.69
3457 5004 1.228124 TTGCACAGTAGGGTGTGGC 60.228 57.895 6.16 0.03 46.73 5.01
3458 5005 1.227999 CGTTGCACAGTAGGGTGTGG 61.228 60.000 6.16 0.00 46.73 4.17
3460 5007 1.597027 GCGTTGCACAGTAGGGTGT 60.597 57.895 0.00 0.00 40.89 4.16
3461 5008 2.325082 GGCGTTGCACAGTAGGGTG 61.325 63.158 0.00 0.00 41.72 4.61
3462 5009 2.032071 GGCGTTGCACAGTAGGGT 59.968 61.111 0.00 0.00 0.00 4.34
3463 5010 1.741770 GAGGCGTTGCACAGTAGGG 60.742 63.158 0.00 0.00 0.00 3.53
3464 5011 1.005037 TGAGGCGTTGCACAGTAGG 60.005 57.895 0.00 0.00 0.00 3.18
3465 5012 0.599991 TGTGAGGCGTTGCACAGTAG 60.600 55.000 0.00 0.00 39.86 2.57
3466 5013 1.443828 TGTGAGGCGTTGCACAGTA 59.556 52.632 0.00 0.00 39.86 2.74
3467 5014 2.189257 TGTGAGGCGTTGCACAGT 59.811 55.556 0.00 0.00 39.86 3.55
3469 5016 0.320050 TATCTGTGAGGCGTTGCACA 59.680 50.000 0.00 0.00 42.25 4.57
3470 5017 1.394917 CTTATCTGTGAGGCGTTGCAC 59.605 52.381 0.00 0.00 35.63 4.57
3471 5018 1.725641 CTTATCTGTGAGGCGTTGCA 58.274 50.000 0.00 0.00 0.00 4.08
3472 5019 0.375106 GCTTATCTGTGAGGCGTTGC 59.625 55.000 0.00 0.00 0.00 4.17
3473 5020 0.647410 CGCTTATCTGTGAGGCGTTG 59.353 55.000 0.00 0.00 40.78 4.10
3474 5021 1.084370 GCGCTTATCTGTGAGGCGTT 61.084 55.000 0.00 0.00 46.20 4.84
3475 5022 1.519455 GCGCTTATCTGTGAGGCGT 60.519 57.895 0.00 0.00 46.20 5.68
3477 5024 1.202417 TGTAGCGCTTATCTGTGAGGC 60.202 52.381 18.68 0.00 0.00 4.70
3478 5025 2.464865 GTGTAGCGCTTATCTGTGAGG 58.535 52.381 18.68 0.00 0.00 3.86
3479 5026 2.112522 CGTGTAGCGCTTATCTGTGAG 58.887 52.381 18.68 0.00 0.00 3.51
3480 5027 1.202256 CCGTGTAGCGCTTATCTGTGA 60.202 52.381 18.68 0.00 39.71 3.58
3481 5028 1.200483 CCGTGTAGCGCTTATCTGTG 58.800 55.000 18.68 0.00 39.71 3.66
3482 5029 0.527817 GCCGTGTAGCGCTTATCTGT 60.528 55.000 18.68 0.00 39.71 3.41
3483 5030 1.215655 GGCCGTGTAGCGCTTATCTG 61.216 60.000 18.68 3.06 39.71 2.90
3484 5031 1.067582 GGCCGTGTAGCGCTTATCT 59.932 57.895 18.68 0.00 39.71 1.98
3485 5032 1.215655 CTGGCCGTGTAGCGCTTATC 61.216 60.000 18.68 7.67 39.71 1.75
3486 5033 1.227263 CTGGCCGTGTAGCGCTTAT 60.227 57.895 18.68 0.00 39.71 1.73
3487 5034 2.183300 CTGGCCGTGTAGCGCTTA 59.817 61.111 18.68 1.63 39.71 3.09
3500 5047 4.830765 TATGGGTGCGACGCTGGC 62.831 66.667 22.08 10.89 31.67 4.85
3501 5048 2.108976 ATATGGGTGCGACGCTGG 59.891 61.111 22.08 0.00 31.67 4.85
3502 5049 1.521457 ACATATGGGTGCGACGCTG 60.521 57.895 22.08 11.28 31.67 5.18
3503 5050 1.521457 CACATATGGGTGCGACGCT 60.521 57.895 22.08 2.17 31.67 5.07
3504 5051 3.014036 CACATATGGGTGCGACGC 58.986 61.111 14.19 14.19 31.10 5.19
3510 5057 2.941064 CTGACTTGAGCACATATGGGTG 59.059 50.000 6.86 0.00 41.72 4.61
3511 5058 2.681976 GCTGACTTGAGCACATATGGGT 60.682 50.000 6.86 1.16 38.95 4.51
3512 5059 1.945394 GCTGACTTGAGCACATATGGG 59.055 52.381 7.80 3.61 38.95 4.00
3513 5060 1.596260 CGCTGACTTGAGCACATATGG 59.404 52.381 7.80 0.00 39.07 2.74
3514 5061 2.030091 CACGCTGACTTGAGCACATATG 59.970 50.000 0.00 0.00 39.07 1.78
3515 5062 2.274437 CACGCTGACTTGAGCACATAT 58.726 47.619 0.00 0.00 39.07 1.78
3516 5063 1.713597 CACGCTGACTTGAGCACATA 58.286 50.000 0.00 0.00 39.07 2.29
3517 5064 1.572085 GCACGCTGACTTGAGCACAT 61.572 55.000 0.00 0.00 39.07 3.21
3518 5065 2.246739 GCACGCTGACTTGAGCACA 61.247 57.895 0.00 0.00 39.07 4.57
3519 5066 2.167808 CTGCACGCTGACTTGAGCAC 62.168 60.000 0.00 0.00 39.07 4.40
3520 5067 1.957695 CTGCACGCTGACTTGAGCA 60.958 57.895 0.00 0.00 39.07 4.26
3521 5068 2.858868 CTGCACGCTGACTTGAGC 59.141 61.111 0.00 0.00 35.46 4.26
3522 5069 2.858868 GCTGCACGCTGACTTGAG 59.141 61.111 0.00 0.00 35.14 3.02
3523 5070 3.037833 CGCTGCACGCTGACTTGA 61.038 61.111 0.00 0.00 36.13 3.02
3533 5080 3.362399 TAGCTCTCAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
3534 5081 3.070576 TAGCTCTCAGGCGCTGCA 61.071 61.111 7.64 0.00 37.05 4.41
3535 5082 2.279385 CTAGCTCTCAGGCGCTGC 60.279 66.667 7.64 2.66 37.05 5.25
3536 5083 1.065600 GTCTAGCTCTCAGGCGCTG 59.934 63.158 7.64 3.67 37.05 5.18
3537 5084 2.477176 CGTCTAGCTCTCAGGCGCT 61.477 63.158 7.64 0.00 33.95 5.92
3538 5085 2.025441 CGTCTAGCTCTCAGGCGC 59.975 66.667 0.00 0.00 33.95 6.53
3539 5086 2.025441 GCGTCTAGCTCTCAGGCG 59.975 66.667 4.62 4.62 43.80 5.52
3548 5095 4.279885 ACTGTGTAGTGTGGCGTCTAGC 62.280 54.545 0.00 0.00 39.66 3.42
3549 5096 1.540267 ACTGTGTAGTGTGGCGTCTAG 59.460 52.381 0.00 0.00 35.34 2.43
3550 5097 1.612676 ACTGTGTAGTGTGGCGTCTA 58.387 50.000 0.00 0.00 35.34 2.59
3551 5098 2.426651 ACTGTGTAGTGTGGCGTCT 58.573 52.632 0.00 0.00 35.34 4.18
3560 5107 2.357517 GGCGCTGCACTGTGTAGT 60.358 61.111 23.60 0.00 37.75 2.73
3561 5108 2.047844 AGGCGCTGCACTGTGTAG 60.048 61.111 19.77 19.77 33.01 2.74
3562 5109 2.357396 CAGGCGCTGCACTGTGTA 60.357 61.111 7.64 3.78 0.00 2.90
3563 5110 4.240103 TCAGGCGCTGCACTGTGT 62.240 61.111 7.64 0.00 36.17 3.72
3564 5111 3.420606 CTCAGGCGCTGCACTGTG 61.421 66.667 7.64 2.76 36.17 3.66
3565 5112 3.586461 CTCTCAGGCGCTGCACTGT 62.586 63.158 7.64 0.00 36.17 3.55
3566 5113 2.814341 CTCTCAGGCGCTGCACTG 60.814 66.667 7.64 13.33 36.07 3.66
3567 5114 4.756458 GCTCTCAGGCGCTGCACT 62.756 66.667 7.64 0.00 0.00 4.40
3568 5115 3.362399 TAGCTCTCAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
3569 5116 3.070576 TAGCTCTCAGGCGCTGCA 61.071 61.111 7.64 0.00 37.05 4.41
3570 5117 2.279385 CTAGCTCTCAGGCGCTGC 60.279 66.667 7.64 2.66 37.05 5.25
3571 5118 2.416678 CCTAGCTCTCAGGCGCTG 59.583 66.667 7.64 3.67 37.05 5.18
3584 5131 0.458543 CTGTGTAGTGTGGCGCCTAG 60.459 60.000 29.70 7.79 0.00 3.02
3585 5132 1.183030 ACTGTGTAGTGTGGCGCCTA 61.183 55.000 29.70 14.39 35.34 3.93
3586 5133 2.343758 CTGTGTAGTGTGGCGCCT 59.656 61.111 29.70 9.99 0.00 5.52
3587 5134 2.030562 ACTGTGTAGTGTGGCGCC 59.969 61.111 22.73 22.73 35.34 6.53
3595 5142 1.532604 TAGGCGCTGCACTGTGTAGT 61.533 55.000 23.60 9.32 37.75 2.73
3596 5143 0.803768 CTAGGCGCTGCACTGTGTAG 60.804 60.000 19.77 19.77 33.01 2.74
3597 5144 1.215382 CTAGGCGCTGCACTGTGTA 59.785 57.895 7.64 3.78 0.00 2.90
3598 5145 2.047844 CTAGGCGCTGCACTGTGT 60.048 61.111 7.64 0.00 0.00 3.72
3599 5146 3.494336 GCTAGGCGCTGCACTGTG 61.494 66.667 7.64 2.76 35.14 3.66
3610 5157 3.787001 AACGCCCAGGAGCTAGGC 61.787 66.667 6.50 6.50 43.53 3.93
3611 5158 2.187946 CAACGCCCAGGAGCTAGG 59.812 66.667 0.00 0.00 0.00 3.02
3612 5159 2.512515 GCAACGCCCAGGAGCTAG 60.513 66.667 0.00 0.00 0.00 3.42
3613 5160 3.318384 TGCAACGCCCAGGAGCTA 61.318 61.111 0.00 0.00 0.00 3.32
3615 5162 3.605749 TAGTGCAACGCCCAGGAGC 62.606 63.158 0.00 0.00 45.86 4.70
3616 5163 1.448540 CTAGTGCAACGCCCAGGAG 60.449 63.158 0.00 0.00 45.86 3.69
3617 5164 2.214216 ACTAGTGCAACGCCCAGGA 61.214 57.895 0.00 0.00 45.86 3.86
3618 5165 2.034879 CACTAGTGCAACGCCCAGG 61.035 63.158 10.54 0.00 45.86 4.45
3619 5166 3.566261 CACTAGTGCAACGCCCAG 58.434 61.111 10.54 0.00 45.86 4.45
3629 5176 1.808799 CTCAGGCGCTGCACTAGTG 60.809 63.158 18.93 18.93 39.95 2.74
3630 5177 1.943116 CTCTCAGGCGCTGCACTAGT 61.943 60.000 7.64 0.00 0.00 2.57
3631 5178 1.226916 CTCTCAGGCGCTGCACTAG 60.227 63.158 7.64 0.00 0.00 2.57
3632 5179 1.536073 AACTCTCAGGCGCTGCACTA 61.536 55.000 7.64 0.00 0.00 2.74
3633 5180 1.536073 TAACTCTCAGGCGCTGCACT 61.536 55.000 7.64 0.00 0.00 4.40
3634 5181 1.079819 TAACTCTCAGGCGCTGCAC 60.080 57.895 7.64 0.00 0.00 4.57
3635 5182 1.216444 CTAACTCTCAGGCGCTGCA 59.784 57.895 7.64 0.00 0.00 4.41
3636 5183 1.520342 CCTAACTCTCAGGCGCTGC 60.520 63.158 7.64 0.00 0.00 5.25
3637 5184 4.823276 CCTAACTCTCAGGCGCTG 57.177 61.111 7.64 3.67 0.00 5.18
3642 5189 1.153549 GTGGCGCCTAACTCTCAGG 60.154 63.158 29.70 0.00 36.16 3.86
3643 5190 1.153549 GGTGGCGCCTAACTCTCAG 60.154 63.158 29.70 0.00 0.00 3.35
3644 5191 2.978824 GGTGGCGCCTAACTCTCA 59.021 61.111 29.70 0.07 0.00 3.27
3645 5192 2.202756 CGGTGGCGCCTAACTCTC 60.203 66.667 29.70 4.81 34.25 3.20
3646 5193 4.452733 GCGGTGGCGCCTAACTCT 62.453 66.667 29.70 0.00 34.25 3.24
3656 5203 0.519961 AAACTATTTCACGCGGTGGC 59.480 50.000 12.47 0.00 33.87 5.01
3657 5204 2.981400 AAAACTATTTCACGCGGTGG 57.019 45.000 12.47 0.00 33.87 4.61
3658 5205 3.181514 CCCTAAAACTATTTCACGCGGTG 60.182 47.826 12.47 6.71 34.45 4.94
3659 5206 3.004862 CCCTAAAACTATTTCACGCGGT 58.995 45.455 12.47 0.00 0.00 5.68
3660 5207 3.063045 GTCCCTAAAACTATTTCACGCGG 59.937 47.826 12.47 0.00 0.00 6.46
3661 5208 3.680937 TGTCCCTAAAACTATTTCACGCG 59.319 43.478 3.53 3.53 0.00 6.01
3662 5209 4.694037 ACTGTCCCTAAAACTATTTCACGC 59.306 41.667 0.00 0.00 0.00 5.34
3663 5210 6.796705 AACTGTCCCTAAAACTATTTCACG 57.203 37.500 0.00 0.00 0.00 4.35
3671 5218 9.975218 ATCACATAATAAACTGTCCCTAAAACT 57.025 29.630 0.00 0.00 0.00 2.66
3675 5222 9.967451 TCAAATCACATAATAAACTGTCCCTAA 57.033 29.630 0.00 0.00 0.00 2.69
3677 5224 9.479549 AATCAAATCACATAATAAACTGTCCCT 57.520 29.630 0.00 0.00 0.00 4.20
3691 5238 9.559732 TGACCTATAATCGAAATCAAATCACAT 57.440 29.630 0.00 0.00 0.00 3.21
3692 5239 8.956533 TGACCTATAATCGAAATCAAATCACA 57.043 30.769 0.00 0.00 0.00 3.58
3718 5265 7.229106 AGCTGTTGTTGGCAAATTTGATAAATT 59.771 29.630 22.31 0.00 42.62 1.82
3719 5266 6.711645 AGCTGTTGTTGGCAAATTTGATAAAT 59.288 30.769 22.31 0.00 36.22 1.40
3720 5267 6.054295 AGCTGTTGTTGGCAAATTTGATAAA 58.946 32.000 22.31 9.12 36.22 1.40
3721 5268 5.609423 AGCTGTTGTTGGCAAATTTGATAA 58.391 33.333 22.31 12.14 36.22 1.75
3722 5269 5.212532 AGCTGTTGTTGGCAAATTTGATA 57.787 34.783 22.31 6.54 36.22 2.15
3723 5270 4.060205 GAGCTGTTGTTGGCAAATTTGAT 58.940 39.130 22.31 0.00 36.22 2.57
3724 5271 3.118847 TGAGCTGTTGTTGGCAAATTTGA 60.119 39.130 22.31 0.00 36.22 2.69
3725 5272 3.001533 GTGAGCTGTTGTTGGCAAATTTG 59.998 43.478 14.03 14.03 36.22 2.32
3726 5273 3.118665 AGTGAGCTGTTGTTGGCAAATTT 60.119 39.130 0.00 0.00 36.22 1.82
3727 5274 2.431782 AGTGAGCTGTTGTTGGCAAATT 59.568 40.909 0.00 0.00 36.22 1.82
3728 5275 2.034124 AGTGAGCTGTTGTTGGCAAAT 58.966 42.857 0.00 0.00 36.22 2.32
3729 5276 1.473258 AGTGAGCTGTTGTTGGCAAA 58.527 45.000 0.00 0.00 36.22 3.68
3730 5277 1.473258 AAGTGAGCTGTTGTTGGCAA 58.527 45.000 0.00 0.00 0.00 4.52
3731 5278 1.473258 AAAGTGAGCTGTTGTTGGCA 58.527 45.000 0.00 0.00 0.00 4.92
3732 5279 2.584492 AAAAGTGAGCTGTTGTTGGC 57.416 45.000 0.00 0.00 0.00 4.52
3733 5280 5.066505 AGAGTAAAAAGTGAGCTGTTGTTGG 59.933 40.000 0.00 0.00 0.00 3.77
3734 5281 5.967674 CAGAGTAAAAAGTGAGCTGTTGTTG 59.032 40.000 0.00 0.00 0.00 3.33
3735 5282 5.880332 TCAGAGTAAAAAGTGAGCTGTTGTT 59.120 36.000 0.00 0.00 0.00 2.83
3736 5283 5.294552 GTCAGAGTAAAAAGTGAGCTGTTGT 59.705 40.000 0.00 0.00 0.00 3.32
3737 5284 5.277538 GGTCAGAGTAAAAAGTGAGCTGTTG 60.278 44.000 0.00 0.00 35.13 3.33
3760 5307 1.660560 CGCAGGAGATTTTGCAGGGG 61.661 60.000 0.00 0.00 40.28 4.79
3763 5310 0.454600 ATGCGCAGGAGATTTTGCAG 59.545 50.000 18.32 0.00 40.28 4.41
3764 5311 0.171679 CATGCGCAGGAGATTTTGCA 59.828 50.000 18.87 0.00 40.28 4.08
3765 5312 0.452987 TCATGCGCAGGAGATTTTGC 59.547 50.000 22.47 0.00 36.97 3.68
3766 5313 2.095110 TGTTCATGCGCAGGAGATTTTG 60.095 45.455 24.84 10.96 0.00 2.44
3767 5314 2.161855 TGTTCATGCGCAGGAGATTTT 58.838 42.857 24.84 0.00 0.00 1.82
3783 5330 3.243336 AGATTCGTGCGAGTTACTGTTC 58.757 45.455 0.00 0.00 0.00 3.18
3875 5422 9.106070 GGTCGTGGTTCTTAGAATTAAACATAT 57.894 33.333 0.00 0.00 0.00 1.78
3876 5423 8.095792 TGGTCGTGGTTCTTAGAATTAAACATA 58.904 33.333 0.00 0.00 0.00 2.29
3877 5424 6.938030 TGGTCGTGGTTCTTAGAATTAAACAT 59.062 34.615 0.00 0.00 0.00 2.71
3898 5445 6.183360 CCAAGTATGTCCTGAAAATGATGGTC 60.183 42.308 0.00 0.00 0.00 4.02
3963 5510 4.157289 GGATTGTTCATGAGCTGTGACATT 59.843 41.667 11.09 1.09 0.00 2.71
3970 5517 3.181499 GCTTCAGGATTGTTCATGAGCTG 60.181 47.826 11.09 0.54 43.00 4.24
3981 5528 3.881688 CCTTAGACATGGCTTCAGGATTG 59.118 47.826 18.18 0.00 0.00 2.67
4021 5568 3.458189 CTTTATCTTGTCCTAGCACCCG 58.542 50.000 0.00 0.00 0.00 5.28
4045 5592 5.104235 ACAAGGGGTGGGTATTAGTAATGAC 60.104 44.000 5.61 0.00 0.00 3.06
4079 5627 5.798132 TCCTTGATGACCATCTGCATATAC 58.202 41.667 10.87 0.00 38.60 1.47
4202 5750 4.439057 GGGAGATTGCGTAGACATTAACA 58.561 43.478 0.00 0.00 0.00 2.41
4253 5801 5.901552 TCAAACCTTTCTGGCTTAAAACTG 58.098 37.500 0.00 0.00 40.22 3.16
4367 5915 5.597594 TGCCAATACAATCTCCATAATTGCA 59.402 36.000 0.00 0.00 37.58 4.08
4625 6173 7.790027 AGATAGAAGATGTTGTTCTATGCACT 58.210 34.615 10.57 1.72 43.99 4.40
4626 6174 8.973378 GTAGATAGAAGATGTTGTTCTATGCAC 58.027 37.037 10.57 5.81 43.99 4.57
4656 6204 5.128499 GCATGACTATAGCCTCAGATGGTAT 59.872 44.000 0.00 3.31 0.00 2.73
4657 6205 4.464244 GCATGACTATAGCCTCAGATGGTA 59.536 45.833 0.00 0.00 0.00 3.25
4658 6206 3.260380 GCATGACTATAGCCTCAGATGGT 59.740 47.826 0.00 0.00 0.00 3.55
4659 6207 3.260128 TGCATGACTATAGCCTCAGATGG 59.740 47.826 0.00 0.00 0.00 3.51
4660 6208 4.532314 TGCATGACTATAGCCTCAGATG 57.468 45.455 0.00 0.00 0.00 2.90
4661 6209 4.081031 CCATGCATGACTATAGCCTCAGAT 60.081 45.833 28.31 0.00 0.00 2.90
4662 6210 3.260128 CCATGCATGACTATAGCCTCAGA 59.740 47.826 28.31 0.00 0.00 3.27
4663 6211 3.260128 TCCATGCATGACTATAGCCTCAG 59.740 47.826 28.31 6.34 0.00 3.35
4664 6212 3.242011 TCCATGCATGACTATAGCCTCA 58.758 45.455 28.31 0.00 0.00 3.86
4665 6213 3.969287 TCCATGCATGACTATAGCCTC 57.031 47.619 28.31 0.00 0.00 4.70
4666 6214 4.923516 AATCCATGCATGACTATAGCCT 57.076 40.909 28.31 1.16 0.00 4.58
4667 6215 6.351711 TGATAATCCATGCATGACTATAGCC 58.648 40.000 28.31 9.98 0.00 3.93
4668 6216 9.722184 ATATGATAATCCATGCATGACTATAGC 57.278 33.333 28.31 16.59 0.00 2.97
4672 6220 9.743581 ACAAATATGATAATCCATGCATGACTA 57.256 29.630 28.31 15.16 0.00 2.59
4673 6221 8.645814 ACAAATATGATAATCCATGCATGACT 57.354 30.769 28.31 13.49 0.00 3.41
4678 6226 9.752961 CAAAGAACAAATATGATAATCCATGCA 57.247 29.630 0.00 0.00 0.00 3.96
4776 6326 1.131126 CCCGATGCATGTTCTCAACAC 59.869 52.381 2.46 0.00 45.50 3.32
4777 6327 1.452110 CCCGATGCATGTTCTCAACA 58.548 50.000 2.46 0.00 46.94 3.33
4795 6345 1.073284 TCCACCCTCTAAAACTGTGCC 59.927 52.381 0.00 0.00 0.00 5.01
4813 6363 2.853235 TTTTTCCGAGACCTTCCTCC 57.147 50.000 0.00 0.00 0.00 4.30
4830 6380 5.334724 CCACAAACAACACACATTTGCTTTT 60.335 36.000 0.00 0.00 36.91 2.27
4831 6381 4.153835 CCACAAACAACACACATTTGCTTT 59.846 37.500 0.00 0.00 36.91 3.51
4832 6382 3.683822 CCACAAACAACACACATTTGCTT 59.316 39.130 0.00 0.00 36.91 3.91
4833 6383 3.056250 TCCACAAACAACACACATTTGCT 60.056 39.130 0.00 0.00 36.91 3.91
4834 6384 3.257393 TCCACAAACAACACACATTTGC 58.743 40.909 0.00 0.00 36.91 3.68
4835 6385 3.864583 CCTCCACAAACAACACACATTTG 59.135 43.478 0.00 0.00 38.89 2.32
4836 6386 3.118811 CCCTCCACAAACAACACACATTT 60.119 43.478 0.00 0.00 0.00 2.32
4837 6387 2.430332 CCCTCCACAAACAACACACATT 59.570 45.455 0.00 0.00 0.00 2.71
4838 6388 2.031120 CCCTCCACAAACAACACACAT 58.969 47.619 0.00 0.00 0.00 3.21
4839 6389 1.468985 CCCTCCACAAACAACACACA 58.531 50.000 0.00 0.00 0.00 3.72
4840 6390 0.744281 CCCCTCCACAAACAACACAC 59.256 55.000 0.00 0.00 0.00 3.82
4841 6391 0.396417 CCCCCTCCACAAACAACACA 60.396 55.000 0.00 0.00 0.00 3.72
4842 6392 0.396556 ACCCCCTCCACAAACAACAC 60.397 55.000 0.00 0.00 0.00 3.32
4843 6393 0.396417 CACCCCCTCCACAAACAACA 60.396 55.000 0.00 0.00 0.00 3.33
4844 6394 1.112916 CCACCCCCTCCACAAACAAC 61.113 60.000 0.00 0.00 0.00 3.32
4845 6395 1.231641 CCACCCCCTCCACAAACAA 59.768 57.895 0.00 0.00 0.00 2.83
4846 6396 2.773527 CCCACCCCCTCCACAAACA 61.774 63.158 0.00 0.00 0.00 2.83
4847 6397 2.117423 CCCACCCCCTCCACAAAC 59.883 66.667 0.00 0.00 0.00 2.93
4848 6398 3.189646 CCCCACCCCCTCCACAAA 61.190 66.667 0.00 0.00 0.00 2.83
4849 6399 4.542627 ACCCCACCCCCTCCACAA 62.543 66.667 0.00 0.00 0.00 3.33
4850 6400 4.542627 AACCCCACCCCCTCCACA 62.543 66.667 0.00 0.00 0.00 4.17
4851 6401 3.979497 CAACCCCACCCCCTCCAC 61.979 72.222 0.00 0.00 0.00 4.02
4852 6402 3.759073 TTCAACCCCACCCCCTCCA 62.759 63.158 0.00 0.00 0.00 3.86
4853 6403 2.441035 CTTTCAACCCCACCCCCTCC 62.441 65.000 0.00 0.00 0.00 4.30
4854 6404 1.076727 CTTTCAACCCCACCCCCTC 59.923 63.158 0.00 0.00 0.00 4.30
4855 6405 0.780090 ATCTTTCAACCCCACCCCCT 60.780 55.000 0.00 0.00 0.00 4.79
4856 6406 0.614697 CATCTTTCAACCCCACCCCC 60.615 60.000 0.00 0.00 0.00 5.40
4857 6407 0.614697 CCATCTTTCAACCCCACCCC 60.615 60.000 0.00 0.00 0.00 4.95
4858 6408 0.407918 TCCATCTTTCAACCCCACCC 59.592 55.000 0.00 0.00 0.00 4.61
4859 6409 2.302587 TTCCATCTTTCAACCCCACC 57.697 50.000 0.00 0.00 0.00 4.61
4860 6410 5.422012 ACATATTTCCATCTTTCAACCCCAC 59.578 40.000 0.00 0.00 0.00 4.61
4861 6411 5.421693 CACATATTTCCATCTTTCAACCCCA 59.578 40.000 0.00 0.00 0.00 4.96
4862 6412 5.422012 ACACATATTTCCATCTTTCAACCCC 59.578 40.000 0.00 0.00 0.00 4.95
4863 6413 6.332630 CACACATATTTCCATCTTTCAACCC 58.667 40.000 0.00 0.00 0.00 4.11
4864 6414 6.071391 ACCACACATATTTCCATCTTTCAACC 60.071 38.462 0.00 0.00 0.00 3.77
4865 6415 6.924111 ACCACACATATTTCCATCTTTCAAC 58.076 36.000 0.00 0.00 0.00 3.18
4866 6416 7.377398 CAACCACACATATTTCCATCTTTCAA 58.623 34.615 0.00 0.00 0.00 2.69
4867 6417 6.071447 CCAACCACACATATTTCCATCTTTCA 60.071 38.462 0.00 0.00 0.00 2.69
4868 6418 6.152661 TCCAACCACACATATTTCCATCTTTC 59.847 38.462 0.00 0.00 0.00 2.62
4869 6419 6.015918 TCCAACCACACATATTTCCATCTTT 58.984 36.000 0.00 0.00 0.00 2.52
4870 6420 5.579047 TCCAACCACACATATTTCCATCTT 58.421 37.500 0.00 0.00 0.00 2.40
4871 6421 5.191727 TCCAACCACACATATTTCCATCT 57.808 39.130 0.00 0.00 0.00 2.90
4872 6422 4.339247 CCTCCAACCACACATATTTCCATC 59.661 45.833 0.00 0.00 0.00 3.51
4873 6423 4.017591 TCCTCCAACCACACATATTTCCAT 60.018 41.667 0.00 0.00 0.00 3.41
4874 6424 3.332187 TCCTCCAACCACACATATTTCCA 59.668 43.478 0.00 0.00 0.00 3.53
4875 6425 3.947834 CTCCTCCAACCACACATATTTCC 59.052 47.826 0.00 0.00 0.00 3.13
4876 6426 3.947834 CCTCCTCCAACCACACATATTTC 59.052 47.826 0.00 0.00 0.00 2.17
4877 6427 3.309121 CCCTCCTCCAACCACACATATTT 60.309 47.826 0.00 0.00 0.00 1.40
4878 6428 2.242196 CCCTCCTCCAACCACACATATT 59.758 50.000 0.00 0.00 0.00 1.28
4879 6429 1.846439 CCCTCCTCCAACCACACATAT 59.154 52.381 0.00 0.00 0.00 1.78
4880 6430 1.285280 CCCTCCTCCAACCACACATA 58.715 55.000 0.00 0.00 0.00 2.29
4881 6431 1.500783 CCCCTCCTCCAACCACACAT 61.501 60.000 0.00 0.00 0.00 3.21
4882 6432 2.153401 CCCCTCCTCCAACCACACA 61.153 63.158 0.00 0.00 0.00 3.72
4883 6433 2.757077 CCCCTCCTCCAACCACAC 59.243 66.667 0.00 0.00 0.00 3.82
4884 6434 2.051050 TACCCCCTCCTCCAACCACA 62.051 60.000 0.00 0.00 0.00 4.17
4885 6435 1.229723 TACCCCCTCCTCCAACCAC 60.230 63.158 0.00 0.00 0.00 4.16
4886 6436 1.229723 GTACCCCCTCCTCCAACCA 60.230 63.158 0.00 0.00 0.00 3.67
4887 6437 0.623617 ATGTACCCCCTCCTCCAACC 60.624 60.000 0.00 0.00 0.00 3.77
4888 6438 0.837940 GATGTACCCCCTCCTCCAAC 59.162 60.000 0.00 0.00 0.00 3.77
4889 6439 0.689745 CGATGTACCCCCTCCTCCAA 60.690 60.000 0.00 0.00 0.00 3.53
4890 6440 1.075525 CGATGTACCCCCTCCTCCA 60.076 63.158 0.00 0.00 0.00 3.86
4891 6441 2.508751 GCGATGTACCCCCTCCTCC 61.509 68.421 0.00 0.00 0.00 4.30
4892 6442 1.760875 TGCGATGTACCCCCTCCTC 60.761 63.158 0.00 0.00 0.00 3.71
4893 6443 2.064581 GTGCGATGTACCCCCTCCT 61.065 63.158 0.00 0.00 0.00 3.69
4894 6444 2.504519 GTGCGATGTACCCCCTCC 59.495 66.667 0.00 0.00 0.00 4.30
4895 6445 2.106332 CGTGCGATGTACCCCCTC 59.894 66.667 0.00 0.00 0.00 4.30
4896 6446 2.682494 ACGTGCGATGTACCCCCT 60.682 61.111 0.00 0.00 0.00 4.79
4897 6447 2.510691 CACGTGCGATGTACCCCC 60.511 66.667 0.82 0.00 0.00 5.40
4898 6448 1.375013 AACACGTGCGATGTACCCC 60.375 57.895 17.22 0.00 0.00 4.95
4899 6449 0.947180 ACAACACGTGCGATGTACCC 60.947 55.000 17.22 0.00 0.00 3.69
4900 6450 0.162933 CACAACACGTGCGATGTACC 59.837 55.000 17.22 0.00 39.19 3.34
4901 6451 3.631962 CACAACACGTGCGATGTAC 57.368 52.632 17.22 0.00 39.19 2.90
4929 6479 0.036388 ACCCCTACATCGCACACAAG 60.036 55.000 0.00 0.00 0.00 3.16
4978 6528 2.168521 CAGACATAGTTCCGGTCCACAT 59.831 50.000 0.00 0.00 31.99 3.21
4987 6537 3.062639 CGCACATGTTCAGACATAGTTCC 59.937 47.826 0.00 0.00 44.55 3.62
4996 6546 0.249120 CCCTACCGCACATGTTCAGA 59.751 55.000 0.00 0.00 0.00 3.27
5019 6569 0.461870 TCTGACCATGTGCGCCATAC 60.462 55.000 4.18 0.00 30.71 2.39
5020 6570 0.251634 TTCTGACCATGTGCGCCATA 59.748 50.000 4.18 0.00 30.71 2.74
5021 6571 0.608856 TTTCTGACCATGTGCGCCAT 60.609 50.000 4.18 5.09 0.00 4.40
5041 6591 2.673368 CCTAGTCGCACATGTTTCCTTC 59.327 50.000 0.00 0.00 0.00 3.46
5080 6630 3.749088 TCGCACACAATTATTCTTTCGGT 59.251 39.130 0.00 0.00 0.00 4.69
5082 6632 5.323900 ACATCGCACACAATTATTCTTTCG 58.676 37.500 0.00 0.00 0.00 3.46
5110 6660 5.998981 ACAAACCATGCATGTTCAATGAAAT 59.001 32.000 24.58 0.48 0.00 2.17
5299 7094 1.263217 GTGTGGAGTGCTACCGTTTTG 59.737 52.381 0.00 0.00 0.00 2.44
5314 7109 5.514274 AATGGTTTTGTACTCAAGTGTGG 57.486 39.130 0.00 0.00 34.88 4.17
5393 7188 2.489329 GTGATCATCACAAGTGGTTGGG 59.511 50.000 13.26 0.00 46.22 4.12
5415 7210 6.610830 TCAATATGTACAAAATTGAGGGGCAT 59.389 34.615 23.15 0.00 35.32 4.40
5425 7220 8.328758 TGAAGTCCCTCTCAATATGTACAAAAT 58.671 33.333 0.00 0.00 0.00 1.82
5430 7225 8.738645 ATTTTGAAGTCCCTCTCAATATGTAC 57.261 34.615 0.00 0.00 0.00 2.90
5441 7236 4.012374 TGATGCTGATTTTGAAGTCCCTC 58.988 43.478 0.00 0.00 0.00 4.30
5442 7237 4.038271 TGATGCTGATTTTGAAGTCCCT 57.962 40.909 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.