Multiple sequence alignment - TraesCS3D01G114900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G114900 chr3D 100.000 2489 0 0 1 2489 68326579 68324091 0.000000e+00 4597.0
1 TraesCS3D01G114900 chr3D 85.938 1024 84 24 789 1781 68336012 68335018 0.000000e+00 1038.0
2 TraesCS3D01G114900 chr3D 83.348 1135 92 38 845 1940 68833105 68834181 0.000000e+00 959.0
3 TraesCS3D01G114900 chr3D 88.235 782 58 15 788 1545 68430343 68431114 0.000000e+00 904.0
4 TraesCS3D01G114900 chr3D 88.588 701 41 19 825 1491 68170070 68170765 0.000000e+00 815.0
5 TraesCS3D01G114900 chr3D 94.632 503 27 0 989 1491 68273791 68274293 0.000000e+00 780.0
6 TraesCS3D01G114900 chr3D 88.684 380 27 9 1567 1941 68431201 68431569 1.360000e-122 449.0
7 TraesCS3D01G114900 chr3D 90.863 197 14 3 23 216 68468913 68468718 6.830000e-66 261.0
8 TraesCS3D01G114900 chr7B 90.379 977 52 13 618 1573 603656878 603657833 0.000000e+00 1245.0
9 TraesCS3D01G114900 chr7B 80.645 341 40 11 2155 2489 579606238 579605918 8.900000e-60 241.0
10 TraesCS3D01G114900 chr7B 89.815 108 11 0 2039 2146 393400839 393400732 3.340000e-29 139.0
11 TraesCS3D01G114900 chr3A 92.157 867 52 8 721 1573 80289740 80288876 0.000000e+00 1210.0
12 TraesCS3D01G114900 chr3A 88.381 809 60 13 788 1571 80412894 80413693 0.000000e+00 942.0
13 TraesCS3D01G114900 chr3A 88.605 430 32 11 1567 1986 80288834 80288412 7.940000e-140 507.0
14 TraesCS3D01G114900 chr3A 84.935 385 38 11 1567 1941 80410183 80409809 3.020000e-99 372.0
15 TraesCS3D01G114900 chr3A 82.903 310 36 7 229 534 583580466 583580762 1.900000e-66 263.0
16 TraesCS3D01G114900 chr3A 79.310 232 40 7 308 534 12166587 12166815 3.310000e-34 156.0
17 TraesCS3D01G114900 chr3A 96.774 62 1 1 558 618 80408206 80408145 4.380000e-18 102.0
18 TraesCS3D01G114900 chr3B 91.908 865 46 10 721 1573 113503458 113504310 0.000000e+00 1188.0
19 TraesCS3D01G114900 chr3B 85.860 1075 99 27 788 1834 112497354 112496305 0.000000e+00 1094.0
20 TraesCS3D01G114900 chr3B 90.387 749 55 10 788 1522 112836247 112835502 0.000000e+00 968.0
21 TraesCS3D01G114900 chr3B 88.742 755 66 8 788 1525 112465856 112465104 0.000000e+00 905.0
22 TraesCS3D01G114900 chr3B 88.889 711 53 11 786 1480 113483291 113483991 0.000000e+00 852.0
23 TraesCS3D01G114900 chr3B 88.252 698 49 15 825 1491 113512762 113512067 0.000000e+00 804.0
24 TraesCS3D01G114900 chr3B 89.175 388 29 9 1567 1944 113504352 113504736 2.900000e-129 472.0
25 TraesCS3D01G114900 chr3B 88.594 377 32 6 1567 1941 112835377 112835010 4.880000e-122 448.0
26 TraesCS3D01G114900 chr3B 91.617 167 10 3 1776 1941 113298297 113298134 6.930000e-56 228.0
27 TraesCS3D01G114900 chr3B 87.857 140 12 5 1804 1941 113487631 113487767 2.560000e-35 159.0
28 TraesCS3D01G114900 chr3B 86.916 107 5 5 1567 1664 113487448 113487554 7.280000e-21 111.0
29 TraesCS3D01G114900 chr4D 90.315 857 57 13 724 1566 134563021 134563865 0.000000e+00 1099.0
30 TraesCS3D01G114900 chr4D 90.286 175 15 2 1782 1955 134564269 134564442 6.930000e-56 228.0
31 TraesCS3D01G114900 chr4D 91.358 162 12 2 1795 1955 134566410 134566250 1.160000e-53 220.0
32 TraesCS3D01G114900 chr4D 86.432 199 18 6 1567 1762 134563925 134564117 2.510000e-50 209.0
33 TraesCS3D01G114900 chr4D 90.654 107 10 0 2040 2146 97930489 97930595 2.580000e-30 143.0
34 TraesCS3D01G114900 chr6A 82.848 309 40 4 229 534 350839382 350839680 5.280000e-67 265.0
35 TraesCS3D01G114900 chr6A 79.245 318 50 8 220 534 273116218 273115914 9.020000e-50 207.0
36 TraesCS3D01G114900 chr6A 77.848 316 47 9 229 534 522419438 522419740 9.150000e-40 174.0
37 TraesCS3D01G114900 chr6A 90.654 107 10 0 2040 2146 129342743 129342637 2.580000e-30 143.0
38 TraesCS3D01G114900 chr5A 82.903 310 38 5 229 534 123979828 123979530 5.280000e-67 265.0
39 TraesCS3D01G114900 chr5A 100.000 28 0 0 1983 2010 611547505 611547532 4.000000e-03 52.8
40 TraesCS3D01G114900 chr1D 83.803 284 31 5 256 536 318557547 318557276 3.180000e-64 255.0
41 TraesCS3D01G114900 chr5D 82.188 320 34 5 2171 2489 130191126 130191423 1.140000e-63 254.0
42 TraesCS3D01G114900 chrUn 84.524 252 28 8 2241 2489 115397396 115397639 3.200000e-59 239.0
43 TraesCS3D01G114900 chrUn 88.587 184 16 3 23 204 27160590 27160770 4.170000e-53 219.0
44 TraesCS3D01G114900 chrUn 79.741 232 39 7 308 534 32305494 32305722 7.120000e-36 161.0
45 TraesCS3D01G114900 chrUn 81.176 170 29 3 2153 2320 49594355 49594187 1.550000e-27 134.0
46 TraesCS3D01G114900 chr2D 79.936 314 44 9 229 535 520531490 520531189 1.940000e-51 213.0
47 TraesCS3D01G114900 chr2D 89.815 108 10 1 2040 2146 591561439 591561332 1.200000e-28 137.0
48 TraesCS3D01G114900 chr4A 79.710 276 36 11 229 501 568899051 568899309 5.470000e-42 182.0
49 TraesCS3D01G114900 chr6B 86.164 159 17 3 23 179 80838979 80838824 1.530000e-37 167.0
50 TraesCS3D01G114900 chr5B 90.654 107 10 0 2040 2146 663232305 663232199 2.580000e-30 143.0
51 TraesCS3D01G114900 chr5B 89.720 107 11 0 2040 2146 588880042 588879936 1.200000e-28 137.0
52 TraesCS3D01G114900 chr1B 90.654 107 10 0 2040 2146 427469913 427469807 2.580000e-30 143.0
53 TraesCS3D01G114900 chr4B 90.566 106 9 1 2040 2145 531069516 531069620 3.340000e-29 139.0
54 TraesCS3D01G114900 chr7D 89.720 107 11 0 2040 2146 102575565 102575671 1.200000e-28 137.0
55 TraesCS3D01G114900 chr1A 86.517 89 12 0 2222 2310 529784221 529784133 5.670000e-17 99.0
56 TraesCS3D01G114900 chr6D 100.000 31 0 0 1 31 445581744 445581714 9.620000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G114900 chr3D 68324091 68326579 2488 True 4597.0 4597 100.000000 1 2489 1 chr3D.!!$R1 2488
1 TraesCS3D01G114900 chr3D 68335018 68336012 994 True 1038.0 1038 85.938000 789 1781 1 chr3D.!!$R2 992
2 TraesCS3D01G114900 chr3D 68833105 68834181 1076 False 959.0 959 83.348000 845 1940 1 chr3D.!!$F3 1095
3 TraesCS3D01G114900 chr3D 68170070 68170765 695 False 815.0 815 88.588000 825 1491 1 chr3D.!!$F1 666
4 TraesCS3D01G114900 chr3D 68273791 68274293 502 False 780.0 780 94.632000 989 1491 1 chr3D.!!$F2 502
5 TraesCS3D01G114900 chr3D 68430343 68431569 1226 False 676.5 904 88.459500 788 1941 2 chr3D.!!$F4 1153
6 TraesCS3D01G114900 chr7B 603656878 603657833 955 False 1245.0 1245 90.379000 618 1573 1 chr7B.!!$F1 955
7 TraesCS3D01G114900 chr3A 80412894 80413693 799 False 942.0 942 88.381000 788 1571 1 chr3A.!!$F2 783
8 TraesCS3D01G114900 chr3A 80288412 80289740 1328 True 858.5 1210 90.381000 721 1986 2 chr3A.!!$R1 1265
9 TraesCS3D01G114900 chr3A 80408145 80410183 2038 True 237.0 372 90.854500 558 1941 2 chr3A.!!$R2 1383
10 TraesCS3D01G114900 chr3B 112496305 112497354 1049 True 1094.0 1094 85.860000 788 1834 1 chr3B.!!$R2 1046
11 TraesCS3D01G114900 chr3B 112465104 112465856 752 True 905.0 905 88.742000 788 1525 1 chr3B.!!$R1 737
12 TraesCS3D01G114900 chr3B 113503458 113504736 1278 False 830.0 1188 90.541500 721 1944 2 chr3B.!!$F2 1223
13 TraesCS3D01G114900 chr3B 113512067 113512762 695 True 804.0 804 88.252000 825 1491 1 chr3B.!!$R4 666
14 TraesCS3D01G114900 chr3B 112835010 112836247 1237 True 708.0 968 89.490500 788 1941 2 chr3B.!!$R5 1153
15 TraesCS3D01G114900 chr3B 113483291 113487767 4476 False 374.0 852 87.887333 786 1941 3 chr3B.!!$F1 1155
16 TraesCS3D01G114900 chr4D 134563021 134564442 1421 False 512.0 1099 89.011000 724 1955 3 chr4D.!!$F2 1231

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
553 554 0.105778 TTGATCGCATCCACCGCATA 59.894 50.0 0.0 0.0 0.0 3.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2143 6971 0.266753 GGGGTGGGGGTGATACTAGA 59.733 60.0 0.0 0.0 0.0 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 8.980832 ATTATGGGACAGAAGGAGTAATAGAT 57.019 34.615 0.00 0.00 45.00 1.98
32 33 7.162973 TGGGACAGAAGGAGTAATAGATAGA 57.837 40.000 0.00 0.00 0.00 1.98
33 34 7.770662 TGGGACAGAAGGAGTAATAGATAGAT 58.229 38.462 0.00 0.00 0.00 1.98
34 35 7.891183 TGGGACAGAAGGAGTAATAGATAGATC 59.109 40.741 0.00 0.00 0.00 2.75
35 36 7.891183 GGGACAGAAGGAGTAATAGATAGATCA 59.109 40.741 0.00 0.00 0.00 2.92
36 37 9.474313 GGACAGAAGGAGTAATAGATAGATCAT 57.526 37.037 0.00 0.00 0.00 2.45
50 51 9.698309 ATAGATAGATCATTTACGTGAAGGTTG 57.302 33.333 4.61 0.00 0.00 3.77
51 52 6.986817 AGATAGATCATTTACGTGAAGGTTGG 59.013 38.462 4.61 0.00 0.00 3.77
52 53 5.160607 AGATCATTTACGTGAAGGTTGGA 57.839 39.130 4.61 0.00 0.00 3.53
53 54 5.556915 AGATCATTTACGTGAAGGTTGGAA 58.443 37.500 4.61 0.00 0.00 3.53
54 55 6.001460 AGATCATTTACGTGAAGGTTGGAAA 58.999 36.000 4.61 0.00 0.00 3.13
55 56 6.659242 AGATCATTTACGTGAAGGTTGGAAAT 59.341 34.615 4.61 0.00 0.00 2.17
56 57 7.827236 AGATCATTTACGTGAAGGTTGGAAATA 59.173 33.333 4.61 0.00 0.00 1.40
57 58 7.747155 TCATTTACGTGAAGGTTGGAAATAA 57.253 32.000 4.61 0.00 0.00 1.40
58 59 8.167605 TCATTTACGTGAAGGTTGGAAATAAA 57.832 30.769 4.61 0.00 0.00 1.40
59 60 8.630917 TCATTTACGTGAAGGTTGGAAATAAAA 58.369 29.630 4.61 0.00 0.00 1.52
60 61 9.418045 CATTTACGTGAAGGTTGGAAATAAAAT 57.582 29.630 0.00 0.00 0.00 1.82
61 62 9.634163 ATTTACGTGAAGGTTGGAAATAAAATC 57.366 29.630 0.00 0.00 0.00 2.17
62 63 6.894339 ACGTGAAGGTTGGAAATAAAATCT 57.106 33.333 0.00 0.00 0.00 2.40
63 64 6.677913 ACGTGAAGGTTGGAAATAAAATCTG 58.322 36.000 0.00 0.00 0.00 2.90
64 65 6.092748 CGTGAAGGTTGGAAATAAAATCTGG 58.907 40.000 0.00 0.00 0.00 3.86
65 66 6.398095 GTGAAGGTTGGAAATAAAATCTGGG 58.602 40.000 0.00 0.00 0.00 4.45
66 67 6.210584 GTGAAGGTTGGAAATAAAATCTGGGA 59.789 38.462 0.00 0.00 0.00 4.37
67 68 6.959366 TGAAGGTTGGAAATAAAATCTGGGAT 59.041 34.615 0.00 0.00 0.00 3.85
68 69 8.119246 TGAAGGTTGGAAATAAAATCTGGGATA 58.881 33.333 0.00 0.00 0.00 2.59
69 70 8.909423 AAGGTTGGAAATAAAATCTGGGATAA 57.091 30.769 0.00 0.00 0.00 1.75
70 71 8.909423 AGGTTGGAAATAAAATCTGGGATAAA 57.091 30.769 0.00 0.00 0.00 1.40
71 72 9.332713 AGGTTGGAAATAAAATCTGGGATAAAA 57.667 29.630 0.00 0.00 0.00 1.52
72 73 9.952030 GGTTGGAAATAAAATCTGGGATAAAAA 57.048 29.630 0.00 0.00 0.00 1.94
88 89 6.573434 GGATAAAAACATCCCAAAAGCTAGG 58.427 40.000 0.00 0.00 38.91 3.02
89 90 4.890158 AAAAACATCCCAAAAGCTAGGG 57.110 40.909 11.61 11.61 46.90 3.53
90 91 3.542969 AAACATCCCAAAAGCTAGGGT 57.457 42.857 16.03 4.14 45.64 4.34
91 92 4.668138 AAACATCCCAAAAGCTAGGGTA 57.332 40.909 16.03 6.20 45.64 3.69
92 93 4.881157 AACATCCCAAAAGCTAGGGTAT 57.119 40.909 16.03 7.83 45.64 2.73
93 94 5.987019 AACATCCCAAAAGCTAGGGTATA 57.013 39.130 16.03 1.04 45.64 1.47
94 95 6.530601 AACATCCCAAAAGCTAGGGTATAT 57.469 37.500 16.03 3.09 45.64 0.86
95 96 7.642094 AACATCCCAAAAGCTAGGGTATATA 57.358 36.000 16.03 0.41 45.64 0.86
96 97 7.642094 ACATCCCAAAAGCTAGGGTATATAA 57.358 36.000 16.03 0.00 45.64 0.98
97 98 8.232098 ACATCCCAAAAGCTAGGGTATATAAT 57.768 34.615 16.03 1.89 45.64 1.28
98 99 8.678798 ACATCCCAAAAGCTAGGGTATATAATT 58.321 33.333 16.03 0.00 45.64 1.40
102 103 9.408648 CCCAAAAGCTAGGGTATATAATTATGG 57.591 37.037 8.28 0.00 40.34 2.74
103 104 8.903820 CCAAAAGCTAGGGTATATAATTATGGC 58.096 37.037 8.28 0.00 0.00 4.40
104 105 9.461312 CAAAAGCTAGGGTATATAATTATGGCA 57.539 33.333 8.28 0.00 0.00 4.92
107 108 9.632638 AAGCTAGGGTATATAATTATGGCAATG 57.367 33.333 8.28 0.00 0.00 2.82
108 109 8.781951 AGCTAGGGTATATAATTATGGCAATGT 58.218 33.333 8.28 0.00 0.00 2.71
109 110 9.408648 GCTAGGGTATATAATTATGGCAATGTT 57.591 33.333 8.28 0.00 0.00 2.71
119 120 5.514274 TTATGGCAATGTTTAGCTAAGCC 57.486 39.130 21.12 21.12 40.93 4.35
121 122 3.364549 TGGCAATGTTTAGCTAAGCCAT 58.635 40.909 24.81 18.67 44.89 4.40
122 123 3.381272 TGGCAATGTTTAGCTAAGCCATC 59.619 43.478 24.81 12.43 44.89 3.51
123 124 3.633986 GGCAATGTTTAGCTAAGCCATCT 59.366 43.478 22.35 10.67 40.29 2.90
124 125 4.498682 GGCAATGTTTAGCTAAGCCATCTG 60.499 45.833 22.35 18.52 40.29 2.90
125 126 4.604976 CAATGTTTAGCTAAGCCATCTGC 58.395 43.478 16.58 0.00 41.71 4.26
156 157 3.198863 GCTTCTCTGAAGCAATGTGTG 57.801 47.619 22.54 0.00 42.56 3.82
157 158 2.810274 GCTTCTCTGAAGCAATGTGTGA 59.190 45.455 22.54 0.00 42.56 3.58
158 159 3.251729 GCTTCTCTGAAGCAATGTGTGAA 59.748 43.478 22.54 0.00 42.56 3.18
159 160 4.781071 CTTCTCTGAAGCAATGTGTGAAC 58.219 43.478 0.00 0.00 0.00 3.18
160 161 4.077300 TCTCTGAAGCAATGTGTGAACT 57.923 40.909 0.00 0.00 0.00 3.01
161 162 3.811497 TCTCTGAAGCAATGTGTGAACTG 59.189 43.478 0.00 0.00 0.00 3.16
162 163 3.807553 TCTGAAGCAATGTGTGAACTGA 58.192 40.909 0.00 0.00 0.00 3.41
163 164 4.198530 TCTGAAGCAATGTGTGAACTGAA 58.801 39.130 0.00 0.00 0.00 3.02
164 165 4.035558 TCTGAAGCAATGTGTGAACTGAAC 59.964 41.667 0.00 0.00 0.00 3.18
165 166 3.947196 TGAAGCAATGTGTGAACTGAACT 59.053 39.130 0.00 0.00 0.00 3.01
166 167 4.398988 TGAAGCAATGTGTGAACTGAACTT 59.601 37.500 0.00 0.00 0.00 2.66
167 168 4.989279 AGCAATGTGTGAACTGAACTTT 57.011 36.364 0.00 0.00 0.00 2.66
168 169 5.329035 AGCAATGTGTGAACTGAACTTTT 57.671 34.783 0.00 0.00 0.00 2.27
169 170 5.104374 AGCAATGTGTGAACTGAACTTTTG 58.896 37.500 0.00 0.00 0.00 2.44
170 171 4.259930 GCAATGTGTGAACTGAACTTTTGC 60.260 41.667 0.00 0.00 31.52 3.68
171 172 4.717233 ATGTGTGAACTGAACTTTTGCA 57.283 36.364 0.00 0.00 0.00 4.08
172 173 4.511617 TGTGTGAACTGAACTTTTGCAA 57.488 36.364 0.00 0.00 0.00 4.08
173 174 4.876125 TGTGTGAACTGAACTTTTGCAAA 58.124 34.783 8.05 8.05 0.00 3.68
174 175 5.292765 TGTGTGAACTGAACTTTTGCAAAA 58.707 33.333 22.61 22.61 0.00 2.44
175 176 5.931146 TGTGTGAACTGAACTTTTGCAAAAT 59.069 32.000 24.06 11.30 0.00 1.82
176 177 6.090628 TGTGTGAACTGAACTTTTGCAAAATC 59.909 34.615 24.06 19.29 0.00 2.17
177 178 5.580297 TGTGAACTGAACTTTTGCAAAATCC 59.420 36.000 24.06 15.79 0.00 3.01
178 179 5.006649 GTGAACTGAACTTTTGCAAAATCCC 59.993 40.000 24.06 15.48 0.00 3.85
179 180 4.751767 ACTGAACTTTTGCAAAATCCCA 57.248 36.364 24.06 18.59 0.00 4.37
180 181 5.294734 ACTGAACTTTTGCAAAATCCCAT 57.705 34.783 24.06 9.42 0.00 4.00
181 182 6.418057 ACTGAACTTTTGCAAAATCCCATA 57.582 33.333 24.06 8.80 0.00 2.74
182 183 7.008021 ACTGAACTTTTGCAAAATCCCATAT 57.992 32.000 24.06 10.44 0.00 1.78
183 184 7.099120 ACTGAACTTTTGCAAAATCCCATATC 58.901 34.615 24.06 14.15 0.00 1.63
184 185 7.002250 TGAACTTTTGCAAAATCCCATATCA 57.998 32.000 24.06 16.10 0.00 2.15
185 186 7.448420 TGAACTTTTGCAAAATCCCATATCAA 58.552 30.769 24.06 0.00 0.00 2.57
186 187 7.603404 TGAACTTTTGCAAAATCCCATATCAAG 59.397 33.333 24.06 10.76 0.00 3.02
187 188 7.008021 ACTTTTGCAAAATCCCATATCAAGT 57.992 32.000 24.06 11.38 0.00 3.16
188 189 7.099120 ACTTTTGCAAAATCCCATATCAAGTC 58.901 34.615 24.06 0.00 0.00 3.01
189 190 6.855763 TTTGCAAAATCCCATATCAAGTCT 57.144 33.333 10.02 0.00 0.00 3.24
190 191 6.855763 TTGCAAAATCCCATATCAAGTCTT 57.144 33.333 0.00 0.00 0.00 3.01
191 192 6.855763 TGCAAAATCCCATATCAAGTCTTT 57.144 33.333 0.00 0.00 0.00 2.52
192 193 6.632909 TGCAAAATCCCATATCAAGTCTTTG 58.367 36.000 0.00 0.00 35.57 2.77
193 194 5.521372 GCAAAATCCCATATCAAGTCTTTGC 59.479 40.000 0.00 0.00 39.28 3.68
194 195 6.632909 CAAAATCCCATATCAAGTCTTTGCA 58.367 36.000 0.00 0.00 34.21 4.08
195 196 5.841957 AATCCCATATCAAGTCTTTGCAC 57.158 39.130 0.00 0.00 34.21 4.57
196 197 4.574674 TCCCATATCAAGTCTTTGCACT 57.425 40.909 0.00 0.00 34.21 4.40
197 198 4.517285 TCCCATATCAAGTCTTTGCACTC 58.483 43.478 0.00 0.00 34.21 3.51
198 199 4.225942 TCCCATATCAAGTCTTTGCACTCT 59.774 41.667 0.00 0.00 34.21 3.24
199 200 5.425217 TCCCATATCAAGTCTTTGCACTCTA 59.575 40.000 0.00 0.00 34.21 2.43
200 201 5.525378 CCCATATCAAGTCTTTGCACTCTAC 59.475 44.000 0.00 0.00 34.21 2.59
201 202 6.344500 CCATATCAAGTCTTTGCACTCTACT 58.656 40.000 0.00 0.00 34.21 2.57
202 203 7.417911 CCCATATCAAGTCTTTGCACTCTACTA 60.418 40.741 0.00 0.00 34.21 1.82
203 204 8.147058 CCATATCAAGTCTTTGCACTCTACTAT 58.853 37.037 0.00 0.00 34.21 2.12
204 205 9.190858 CATATCAAGTCTTTGCACTCTACTATC 57.809 37.037 0.00 0.00 34.21 2.08
205 206 5.641709 TCAAGTCTTTGCACTCTACTATCG 58.358 41.667 0.00 0.00 34.21 2.92
206 207 5.183331 TCAAGTCTTTGCACTCTACTATCGT 59.817 40.000 0.00 0.00 34.21 3.73
207 208 4.987832 AGTCTTTGCACTCTACTATCGTG 58.012 43.478 0.00 0.00 0.00 4.35
208 209 4.106197 GTCTTTGCACTCTACTATCGTGG 58.894 47.826 0.00 0.00 0.00 4.94
209 210 2.579207 TTGCACTCTACTATCGTGGC 57.421 50.000 0.00 0.00 0.00 5.01
210 211 0.380733 TGCACTCTACTATCGTGGCG 59.619 55.000 0.00 0.00 0.00 5.69
211 212 0.661552 GCACTCTACTATCGTGGCGA 59.338 55.000 0.00 0.00 41.13 5.54
212 213 1.597445 GCACTCTACTATCGTGGCGAC 60.597 57.143 0.00 0.00 39.18 5.19
213 214 1.669265 CACTCTACTATCGTGGCGACA 59.331 52.381 0.00 0.00 39.18 4.35
214 215 2.290916 CACTCTACTATCGTGGCGACAT 59.709 50.000 0.00 0.00 46.14 3.06
215 216 2.548904 ACTCTACTATCGTGGCGACATC 59.451 50.000 0.00 0.00 46.14 3.06
216 217 2.548480 CTCTACTATCGTGGCGACATCA 59.452 50.000 0.00 0.00 46.14 3.07
217 218 2.946990 TCTACTATCGTGGCGACATCAA 59.053 45.455 0.00 0.00 46.14 2.57
218 219 2.209838 ACTATCGTGGCGACATCAAG 57.790 50.000 0.00 0.00 46.14 3.02
219 220 1.749063 ACTATCGTGGCGACATCAAGA 59.251 47.619 0.00 0.00 46.14 3.02
220 221 2.362397 ACTATCGTGGCGACATCAAGAT 59.638 45.455 0.00 0.00 46.14 2.40
221 222 2.315925 ATCGTGGCGACATCAAGATT 57.684 45.000 0.00 0.00 46.14 2.40
222 223 1.358877 TCGTGGCGACATCAAGATTG 58.641 50.000 0.00 0.00 46.14 2.67
223 224 1.067213 TCGTGGCGACATCAAGATTGA 60.067 47.619 0.00 0.00 46.14 2.57
224 225 1.325640 CGTGGCGACATCAAGATTGAG 59.674 52.381 0.00 0.00 46.14 3.02
225 226 1.667724 GTGGCGACATCAAGATTGAGG 59.332 52.381 0.00 5.73 46.14 3.86
236 237 7.627298 CATCAAGATTGAGGTTCTCTTTGAT 57.373 36.000 1.32 0.00 41.08 2.57
237 238 8.053026 CATCAAGATTGAGGTTCTCTTTGATT 57.947 34.615 1.32 0.00 41.08 2.57
238 239 7.678947 TCAAGATTGAGGTTCTCTTTGATTC 57.321 36.000 0.00 0.00 32.50 2.52
239 240 7.226441 TCAAGATTGAGGTTCTCTTTGATTCA 58.774 34.615 0.00 0.00 32.50 2.57
240 241 7.886970 TCAAGATTGAGGTTCTCTTTGATTCAT 59.113 33.333 0.00 0.00 32.50 2.57
241 242 9.170734 CAAGATTGAGGTTCTCTTTGATTCATA 57.829 33.333 0.00 0.00 0.00 2.15
242 243 9.745018 AAGATTGAGGTTCTCTTTGATTCATAA 57.255 29.630 0.00 0.00 0.00 1.90
243 244 9.393512 AGATTGAGGTTCTCTTTGATTCATAAG 57.606 33.333 0.00 0.00 0.00 1.73
244 245 9.388506 GATTGAGGTTCTCTTTGATTCATAAGA 57.611 33.333 9.44 9.44 0.00 2.10
245 246 9.917887 ATTGAGGTTCTCTTTGATTCATAAGAT 57.082 29.630 9.96 0.00 30.57 2.40
246 247 9.745018 TTGAGGTTCTCTTTGATTCATAAGATT 57.255 29.630 9.96 0.00 30.57 2.40
247 248 9.388506 TGAGGTTCTCTTTGATTCATAAGATTC 57.611 33.333 9.96 0.00 30.57 2.52
248 249 9.612066 GAGGTTCTCTTTGATTCATAAGATTCT 57.388 33.333 9.96 0.00 30.57 2.40
249 250 9.612066 AGGTTCTCTTTGATTCATAAGATTCTC 57.388 33.333 9.96 4.47 30.57 2.87
250 251 8.547069 GGTTCTCTTTGATTCATAAGATTCTCG 58.453 37.037 9.96 0.00 30.57 4.04
251 252 9.307121 GTTCTCTTTGATTCATAAGATTCTCGA 57.693 33.333 9.96 0.00 30.57 4.04
252 253 9.875691 TTCTCTTTGATTCATAAGATTCTCGAA 57.124 29.630 9.96 7.96 30.57 3.71
253 254 9.875691 TCTCTTTGATTCATAAGATTCTCGAAA 57.124 29.630 9.96 0.00 30.57 3.46
254 255 9.913451 CTCTTTGATTCATAAGATTCTCGAAAC 57.087 33.333 9.96 0.00 30.57 2.78
255 256 8.595533 TCTTTGATTCATAAGATTCTCGAAACG 58.404 33.333 7.00 0.00 0.00 3.60
256 257 6.274001 TGATTCATAAGATTCTCGAAACGC 57.726 37.500 0.00 0.00 0.00 4.84
257 258 4.755191 TTCATAAGATTCTCGAAACGCG 57.245 40.909 3.53 3.53 42.69 6.01
258 259 3.113322 TCATAAGATTCTCGAAACGCGG 58.887 45.455 12.47 0.00 41.33 6.46
259 260 2.925578 TAAGATTCTCGAAACGCGGA 57.074 45.000 12.47 0.00 41.33 5.54
260 261 2.074547 AAGATTCTCGAAACGCGGAA 57.925 45.000 12.47 2.96 41.33 4.30
261 262 2.074547 AGATTCTCGAAACGCGGAAA 57.925 45.000 12.47 0.00 41.33 3.13
262 263 2.618053 AGATTCTCGAAACGCGGAAAT 58.382 42.857 12.47 0.00 41.33 2.17
263 264 3.777478 AGATTCTCGAAACGCGGAAATA 58.223 40.909 12.47 0.00 41.33 1.40
264 265 3.797256 AGATTCTCGAAACGCGGAAATAG 59.203 43.478 12.47 2.02 41.33 1.73
265 266 1.917273 TCTCGAAACGCGGAAATAGG 58.083 50.000 12.47 0.00 41.33 2.57
266 267 1.473677 TCTCGAAACGCGGAAATAGGA 59.526 47.619 12.47 0.00 41.33 2.94
267 268 2.094597 TCTCGAAACGCGGAAATAGGAA 60.095 45.455 12.47 0.00 41.33 3.36
268 269 2.669434 CTCGAAACGCGGAAATAGGAAA 59.331 45.455 12.47 0.00 41.33 3.13
269 270 3.065655 TCGAAACGCGGAAATAGGAAAA 58.934 40.909 12.47 0.00 41.33 2.29
270 271 3.497640 TCGAAACGCGGAAATAGGAAAAA 59.502 39.130 12.47 0.00 41.33 1.94
271 272 4.154556 TCGAAACGCGGAAATAGGAAAAAT 59.845 37.500 12.47 0.00 41.33 1.82
272 273 5.350914 TCGAAACGCGGAAATAGGAAAAATA 59.649 36.000 12.47 0.00 41.33 1.40
273 274 6.022821 CGAAACGCGGAAATAGGAAAAATAA 58.977 36.000 12.47 0.00 36.03 1.40
274 275 6.523893 CGAAACGCGGAAATAGGAAAAATAAA 59.476 34.615 12.47 0.00 36.03 1.40
275 276 7.253190 CGAAACGCGGAAATAGGAAAAATAAAG 60.253 37.037 12.47 0.00 36.03 1.85
276 277 5.886992 ACGCGGAAATAGGAAAAATAAAGG 58.113 37.500 12.47 0.00 0.00 3.11
277 278 5.163591 ACGCGGAAATAGGAAAAATAAAGGG 60.164 40.000 12.47 0.00 0.00 3.95
278 279 5.163591 CGCGGAAATAGGAAAAATAAAGGGT 60.164 40.000 0.00 0.00 0.00 4.34
279 280 6.626402 CGCGGAAATAGGAAAAATAAAGGGTT 60.626 38.462 0.00 0.00 0.00 4.11
280 281 7.415429 CGCGGAAATAGGAAAAATAAAGGGTTA 60.415 37.037 0.00 0.00 0.00 2.85
281 282 7.919091 GCGGAAATAGGAAAAATAAAGGGTTAG 59.081 37.037 0.00 0.00 0.00 2.34
282 283 9.181061 CGGAAATAGGAAAAATAAAGGGTTAGA 57.819 33.333 0.00 0.00 0.00 2.10
286 287 9.475620 AATAGGAAAAATAAAGGGTTAGAGTGG 57.524 33.333 0.00 0.00 0.00 4.00
287 288 5.715279 AGGAAAAATAAAGGGTTAGAGTGGC 59.285 40.000 0.00 0.00 0.00 5.01
288 289 5.479027 GGAAAAATAAAGGGTTAGAGTGGCA 59.521 40.000 0.00 0.00 0.00 4.92
289 290 6.154534 GGAAAAATAAAGGGTTAGAGTGGCAT 59.845 38.462 0.00 0.00 0.00 4.40
290 291 6.530019 AAAATAAAGGGTTAGAGTGGCATG 57.470 37.500 0.00 0.00 0.00 4.06
291 292 4.862641 ATAAAGGGTTAGAGTGGCATGT 57.137 40.909 0.00 0.00 0.00 3.21
292 293 2.789409 AAGGGTTAGAGTGGCATGTC 57.211 50.000 0.00 0.00 0.00 3.06
293 294 0.912486 AGGGTTAGAGTGGCATGTCC 59.088 55.000 0.00 0.00 0.00 4.02
294 295 0.618458 GGGTTAGAGTGGCATGTCCA 59.382 55.000 4.93 4.93 44.18 4.02
304 305 2.733956 TGGCATGTCCACTTTAATCCC 58.266 47.619 4.93 0.00 40.72 3.85
305 306 2.042297 TGGCATGTCCACTTTAATCCCA 59.958 45.455 4.93 0.00 40.72 4.37
306 307 3.299503 GGCATGTCCACTTTAATCCCAT 58.700 45.455 0.00 0.00 34.01 4.00
307 308 4.079500 TGGCATGTCCACTTTAATCCCATA 60.080 41.667 4.93 0.00 40.72 2.74
308 309 4.892934 GGCATGTCCACTTTAATCCCATAA 59.107 41.667 0.00 0.00 34.01 1.90
309 310 5.539955 GGCATGTCCACTTTAATCCCATAAT 59.460 40.000 0.00 0.00 34.01 1.28
310 311 6.294731 GGCATGTCCACTTTAATCCCATAATC 60.295 42.308 0.00 0.00 34.01 1.75
311 312 6.294731 GCATGTCCACTTTAATCCCATAATCC 60.295 42.308 0.00 0.00 0.00 3.01
312 313 5.701224 TGTCCACTTTAATCCCATAATCCC 58.299 41.667 0.00 0.00 0.00 3.85
313 314 5.194740 TGTCCACTTTAATCCCATAATCCCA 59.805 40.000 0.00 0.00 0.00 4.37
314 315 6.125919 TGTCCACTTTAATCCCATAATCCCAT 60.126 38.462 0.00 0.00 0.00 4.00
315 316 7.074366 TGTCCACTTTAATCCCATAATCCCATA 59.926 37.037 0.00 0.00 0.00 2.74
316 317 7.611855 GTCCACTTTAATCCCATAATCCCATAG 59.388 40.741 0.00 0.00 0.00 2.23
317 318 6.891908 CCACTTTAATCCCATAATCCCATAGG 59.108 42.308 0.00 0.00 0.00 2.57
341 342 8.757877 AGGATTAGCATAAAGTTTTTAATGCCA 58.242 29.630 15.15 2.88 35.82 4.92
342 343 8.817100 GGATTAGCATAAAGTTTTTAATGCCAC 58.183 33.333 15.15 7.14 35.82 5.01
343 344 9.364989 GATTAGCATAAAGTTTTTAATGCCACA 57.635 29.630 15.15 3.95 35.82 4.17
344 345 8.755696 TTAGCATAAAGTTTTTAATGCCACAG 57.244 30.769 15.15 0.00 35.82 3.66
345 346 6.991938 AGCATAAAGTTTTTAATGCCACAGA 58.008 32.000 15.15 0.00 35.82 3.41
346 347 7.441017 AGCATAAAGTTTTTAATGCCACAGAA 58.559 30.769 15.15 0.00 35.82 3.02
347 348 7.930865 AGCATAAAGTTTTTAATGCCACAGAAA 59.069 29.630 15.15 0.00 35.82 2.52
348 349 8.555361 GCATAAAGTTTTTAATGCCACAGAAAA 58.445 29.630 9.72 0.00 0.00 2.29
370 371 7.767250 AAAAATAAAGGAAGTGAAGAGGGAG 57.233 36.000 0.00 0.00 0.00 4.30
371 372 5.443230 AATAAAGGAAGTGAAGAGGGAGG 57.557 43.478 0.00 0.00 0.00 4.30
372 373 2.424684 AAGGAAGTGAAGAGGGAGGT 57.575 50.000 0.00 0.00 0.00 3.85
373 374 2.424684 AGGAAGTGAAGAGGGAGGTT 57.575 50.000 0.00 0.00 0.00 3.50
374 375 3.562108 AGGAAGTGAAGAGGGAGGTTA 57.438 47.619 0.00 0.00 0.00 2.85
375 376 3.445987 AGGAAGTGAAGAGGGAGGTTAG 58.554 50.000 0.00 0.00 0.00 2.34
376 377 3.077695 AGGAAGTGAAGAGGGAGGTTAGA 59.922 47.826 0.00 0.00 0.00 2.10
377 378 3.449377 GGAAGTGAAGAGGGAGGTTAGAG 59.551 52.174 0.00 0.00 0.00 2.43
378 379 3.837399 AGTGAAGAGGGAGGTTAGAGT 57.163 47.619 0.00 0.00 0.00 3.24
379 380 4.949966 AGTGAAGAGGGAGGTTAGAGTA 57.050 45.455 0.00 0.00 0.00 2.59
380 381 4.862371 AGTGAAGAGGGAGGTTAGAGTAG 58.138 47.826 0.00 0.00 0.00 2.57
381 382 4.540906 AGTGAAGAGGGAGGTTAGAGTAGA 59.459 45.833 0.00 0.00 0.00 2.59
382 383 5.194942 AGTGAAGAGGGAGGTTAGAGTAGAT 59.805 44.000 0.00 0.00 0.00 1.98
383 384 5.300792 GTGAAGAGGGAGGTTAGAGTAGATG 59.699 48.000 0.00 0.00 0.00 2.90
384 385 3.839778 AGAGGGAGGTTAGAGTAGATGC 58.160 50.000 0.00 0.00 0.00 3.91
385 386 3.465588 AGAGGGAGGTTAGAGTAGATGCT 59.534 47.826 0.00 0.00 0.00 3.79
386 387 3.571590 AGGGAGGTTAGAGTAGATGCTG 58.428 50.000 0.00 0.00 0.00 4.41
387 388 2.630580 GGGAGGTTAGAGTAGATGCTGG 59.369 54.545 0.00 0.00 0.00 4.85
388 389 3.567397 GGAGGTTAGAGTAGATGCTGGA 58.433 50.000 0.00 0.00 0.00 3.86
389 390 4.156477 GGAGGTTAGAGTAGATGCTGGAT 58.844 47.826 0.00 0.00 0.00 3.41
390 391 4.021544 GGAGGTTAGAGTAGATGCTGGATG 60.022 50.000 0.00 0.00 0.00 3.51
391 392 4.551671 AGGTTAGAGTAGATGCTGGATGT 58.448 43.478 0.00 0.00 0.00 3.06
392 393 4.965532 AGGTTAGAGTAGATGCTGGATGTT 59.034 41.667 0.00 0.00 0.00 2.71
393 394 5.069781 AGGTTAGAGTAGATGCTGGATGTTC 59.930 44.000 0.00 0.00 0.00 3.18
394 395 5.163405 GGTTAGAGTAGATGCTGGATGTTCA 60.163 44.000 0.00 0.00 0.00 3.18
395 396 6.341316 GTTAGAGTAGATGCTGGATGTTCAA 58.659 40.000 0.00 0.00 0.00 2.69
396 397 5.627182 AGAGTAGATGCTGGATGTTCAAT 57.373 39.130 0.00 0.00 0.00 2.57
397 398 5.366460 AGAGTAGATGCTGGATGTTCAATG 58.634 41.667 0.00 0.00 0.00 2.82
398 399 5.129980 AGAGTAGATGCTGGATGTTCAATGA 59.870 40.000 0.00 0.00 0.00 2.57
399 400 5.748402 AGTAGATGCTGGATGTTCAATGAA 58.252 37.500 0.00 0.00 0.00 2.57
400 401 6.182627 AGTAGATGCTGGATGTTCAATGAAA 58.817 36.000 0.00 0.00 0.00 2.69
401 402 6.832384 AGTAGATGCTGGATGTTCAATGAAAT 59.168 34.615 0.00 0.00 0.00 2.17
402 403 5.902681 AGATGCTGGATGTTCAATGAAATG 58.097 37.500 0.00 0.00 0.00 2.32
403 404 5.421056 AGATGCTGGATGTTCAATGAAATGT 59.579 36.000 0.00 0.00 0.00 2.71
404 405 6.604396 AGATGCTGGATGTTCAATGAAATGTA 59.396 34.615 0.00 0.00 0.00 2.29
405 406 5.953183 TGCTGGATGTTCAATGAAATGTAC 58.047 37.500 0.00 0.00 0.00 2.90
406 407 5.711506 TGCTGGATGTTCAATGAAATGTACT 59.288 36.000 0.00 0.00 0.00 2.73
407 408 6.883756 TGCTGGATGTTCAATGAAATGTACTA 59.116 34.615 0.00 0.00 0.00 1.82
408 409 7.066163 TGCTGGATGTTCAATGAAATGTACTAG 59.934 37.037 0.00 0.00 0.00 2.57
409 410 7.280876 GCTGGATGTTCAATGAAATGTACTAGA 59.719 37.037 0.00 0.00 0.00 2.43
410 411 8.492673 TGGATGTTCAATGAAATGTACTAGAC 57.507 34.615 0.00 0.00 0.00 2.59
411 412 8.100164 TGGATGTTCAATGAAATGTACTAGACA 58.900 33.333 0.00 0.00 43.97 3.41
473 474 9.511272 TCCTATGAATCAAATGATCAATGTAGG 57.489 33.333 0.00 8.84 32.75 3.18
474 475 9.511272 CCTATGAATCAAATGATCAATGTAGGA 57.489 33.333 0.00 0.00 32.75 2.94
494 495 9.901172 TGTAGGAATTTCTAAGAATTCTTACCC 57.099 33.333 21.46 14.98 46.80 3.69
497 498 8.275758 AGGAATTTCTAAGAATTCTTACCCTCC 58.724 37.037 21.46 19.71 42.75 4.30
498 499 8.053355 GGAATTTCTAAGAATTCTTACCCTCCA 58.947 37.037 21.46 4.37 42.75 3.86
499 500 9.462606 GAATTTCTAAGAATTCTTACCCTCCAA 57.537 33.333 21.46 9.88 40.94 3.53
500 501 9.822727 AATTTCTAAGAATTCTTACCCTCCAAA 57.177 29.630 21.46 13.63 37.40 3.28
501 502 9.997172 ATTTCTAAGAATTCTTACCCTCCAAAT 57.003 29.630 21.46 14.84 37.40 2.32
516 517 8.712228 ACCCTCCAAATATTCTATGAAATTCC 57.288 34.615 0.00 0.00 0.00 3.01
517 518 8.514504 ACCCTCCAAATATTCTATGAAATTCCT 58.485 33.333 0.00 0.00 0.00 3.36
518 519 9.372189 CCCTCCAAATATTCTATGAAATTCCTT 57.628 33.333 0.00 0.00 0.00 3.36
538 539 5.656213 CTTTGAATCAAAGGAGCCTTGAT 57.344 39.130 23.96 5.64 44.75 2.57
539 540 5.648572 CTTTGAATCAAAGGAGCCTTGATC 58.351 41.667 23.96 0.64 44.75 2.92
540 541 3.273434 TGAATCAAAGGAGCCTTGATCG 58.727 45.455 1.91 0.00 36.26 3.69
541 542 1.673168 ATCAAAGGAGCCTTGATCGC 58.327 50.000 1.91 0.00 36.26 4.58
542 543 0.324614 TCAAAGGAGCCTTGATCGCA 59.675 50.000 1.91 0.00 36.26 5.10
543 544 1.065199 TCAAAGGAGCCTTGATCGCAT 60.065 47.619 1.91 0.00 36.26 4.73
544 545 1.332997 CAAAGGAGCCTTGATCGCATC 59.667 52.381 1.91 0.00 36.26 3.91
545 546 0.179034 AAGGAGCCTTGATCGCATCC 60.179 55.000 0.00 0.00 34.60 3.51
546 547 1.146930 GGAGCCTTGATCGCATCCA 59.853 57.895 0.00 0.00 0.00 3.41
547 548 1.162800 GGAGCCTTGATCGCATCCAC 61.163 60.000 0.00 0.00 0.00 4.02
548 549 1.153086 AGCCTTGATCGCATCCACC 60.153 57.895 0.00 0.00 0.00 4.61
549 550 2.537560 GCCTTGATCGCATCCACCG 61.538 63.158 0.00 0.00 0.00 4.94
550 551 2.537560 CCTTGATCGCATCCACCGC 61.538 63.158 0.00 0.00 0.00 5.68
551 552 1.815003 CTTGATCGCATCCACCGCA 60.815 57.895 0.00 0.00 0.00 5.69
552 553 1.153188 TTGATCGCATCCACCGCAT 60.153 52.632 0.00 0.00 0.00 4.73
553 554 0.105778 TTGATCGCATCCACCGCATA 59.894 50.000 0.00 0.00 0.00 3.14
554 555 0.105778 TGATCGCATCCACCGCATAA 59.894 50.000 0.00 0.00 0.00 1.90
555 556 1.270785 TGATCGCATCCACCGCATAAT 60.271 47.619 0.00 0.00 0.00 1.28
556 557 1.129251 GATCGCATCCACCGCATAATG 59.871 52.381 0.00 0.00 0.00 1.90
557 558 0.179059 TCGCATCCACCGCATAATGT 60.179 50.000 0.00 0.00 0.00 2.71
558 559 0.662619 CGCATCCACCGCATAATGTT 59.337 50.000 0.00 0.00 0.00 2.71
559 560 1.870402 CGCATCCACCGCATAATGTTA 59.130 47.619 0.00 0.00 0.00 2.41
560 561 2.289274 CGCATCCACCGCATAATGTTAA 59.711 45.455 0.00 0.00 0.00 2.01
561 562 3.058293 CGCATCCACCGCATAATGTTAAT 60.058 43.478 0.00 0.00 0.00 1.40
562 563 4.229096 GCATCCACCGCATAATGTTAATG 58.771 43.478 0.00 0.00 0.00 1.90
563 564 4.797471 CATCCACCGCATAATGTTAATGG 58.203 43.478 0.00 0.00 0.00 3.16
564 565 2.621055 TCCACCGCATAATGTTAATGGC 59.379 45.455 0.00 0.00 0.00 4.40
565 566 2.360483 CCACCGCATAATGTTAATGGCA 59.640 45.455 0.00 0.00 0.00 4.92
566 567 3.550639 CCACCGCATAATGTTAATGGCAG 60.551 47.826 0.00 0.00 0.00 4.85
567 568 3.066621 CACCGCATAATGTTAATGGCAGT 59.933 43.478 0.00 0.00 0.00 4.40
568 569 4.274705 CACCGCATAATGTTAATGGCAGTA 59.725 41.667 0.00 0.00 0.00 2.74
569 570 4.884744 ACCGCATAATGTTAATGGCAGTAA 59.115 37.500 2.84 2.84 0.00 2.24
570 571 5.534654 ACCGCATAATGTTAATGGCAGTAAT 59.465 36.000 10.85 0.00 0.00 1.89
571 572 6.040391 ACCGCATAATGTTAATGGCAGTAATT 59.960 34.615 10.85 4.87 0.00 1.40
572 573 6.922957 CCGCATAATGTTAATGGCAGTAATTT 59.077 34.615 10.85 10.12 0.00 1.82
573 574 8.079203 CCGCATAATGTTAATGGCAGTAATTTA 58.921 33.333 10.85 11.77 0.00 1.40
574 575 8.901748 CGCATAATGTTAATGGCAGTAATTTAC 58.098 33.333 10.85 0.00 0.00 2.01
575 576 9.965824 GCATAATGTTAATGGCAGTAATTTACT 57.034 29.630 10.85 3.16 40.28 2.24
590 591 8.516811 AGTAATTTACTGTTTACACGAGTCTG 57.483 34.615 8.27 0.00 37.69 3.51
591 592 5.840940 ATTTACTGTTTACACGAGTCTGC 57.159 39.130 0.00 0.00 0.00 4.26
592 593 2.882927 ACTGTTTACACGAGTCTGCA 57.117 45.000 0.00 0.00 0.00 4.41
593 594 3.386768 ACTGTTTACACGAGTCTGCAT 57.613 42.857 0.00 0.00 0.00 3.96
594 595 3.728845 ACTGTTTACACGAGTCTGCATT 58.271 40.909 0.00 0.00 0.00 3.56
595 596 4.127171 ACTGTTTACACGAGTCTGCATTT 58.873 39.130 0.00 0.00 0.00 2.32
596 597 5.294356 ACTGTTTACACGAGTCTGCATTTA 58.706 37.500 0.00 0.00 0.00 1.40
597 598 5.756347 ACTGTTTACACGAGTCTGCATTTAA 59.244 36.000 0.00 0.00 0.00 1.52
598 599 5.981174 TGTTTACACGAGTCTGCATTTAAC 58.019 37.500 0.00 0.00 0.00 2.01
599 600 5.756347 TGTTTACACGAGTCTGCATTTAACT 59.244 36.000 0.00 0.00 0.00 2.24
600 601 6.259167 TGTTTACACGAGTCTGCATTTAACTT 59.741 34.615 0.00 0.00 0.00 2.66
601 602 6.854496 TTACACGAGTCTGCATTTAACTTT 57.146 33.333 0.00 0.00 0.00 2.66
602 603 5.095691 ACACGAGTCTGCATTTAACTTTG 57.904 39.130 0.00 0.00 0.00 2.77
603 604 4.024048 ACACGAGTCTGCATTTAACTTTGG 60.024 41.667 0.00 0.00 0.00 3.28
604 605 4.213270 CACGAGTCTGCATTTAACTTTGGA 59.787 41.667 0.00 0.00 0.00 3.53
605 606 4.819630 ACGAGTCTGCATTTAACTTTGGAA 59.180 37.500 0.00 0.00 0.00 3.53
606 607 5.473504 ACGAGTCTGCATTTAACTTTGGAAT 59.526 36.000 0.00 0.00 0.00 3.01
607 608 6.016276 ACGAGTCTGCATTTAACTTTGGAATT 60.016 34.615 0.00 0.00 0.00 2.17
608 609 7.174253 ACGAGTCTGCATTTAACTTTGGAATTA 59.826 33.333 0.00 0.00 0.00 1.40
609 610 8.184192 CGAGTCTGCATTTAACTTTGGAATTAT 58.816 33.333 0.00 0.00 0.00 1.28
646 647 7.801783 CACGTTCAAAATTTTAAGTACCTCTCC 59.198 37.037 2.44 0.00 0.00 3.71
661 662 4.775236 ACCTCTCCGTAAGTATCGTAGTT 58.225 43.478 0.00 0.00 0.00 2.24
665 670 2.951642 TCCGTAAGTATCGTAGTTGGGG 59.048 50.000 0.00 0.00 0.00 4.96
690 695 1.364626 ATTTCTCTGCTTGCCGCTCG 61.365 55.000 0.00 0.00 40.11 5.03
697 702 2.577059 CTTGCCGCTCGGAAGGTA 59.423 61.111 13.11 0.00 37.50 3.08
698 703 1.810030 CTTGCCGCTCGGAAGGTAC 60.810 63.158 13.11 0.00 37.50 3.34
699 704 3.305177 TTGCCGCTCGGAAGGTACC 62.305 63.158 13.11 2.73 37.50 3.34
700 705 3.459063 GCCGCTCGGAAGGTACCT 61.459 66.667 9.21 9.21 37.50 3.08
701 706 2.806237 CCGCTCGGAAGGTACCTC 59.194 66.667 16.64 8.80 37.50 3.85
702 707 1.753463 CCGCTCGGAAGGTACCTCT 60.753 63.158 16.64 5.54 37.50 3.69
703 708 1.726533 CCGCTCGGAAGGTACCTCTC 61.727 65.000 16.64 14.30 37.50 3.20
704 709 1.726533 CGCTCGGAAGGTACCTCTCC 61.727 65.000 16.64 20.96 0.00 3.71
705 710 1.726533 GCTCGGAAGGTACCTCTCCG 61.727 65.000 35.45 35.45 44.43 4.63
706 711 0.394080 CTCGGAAGGTACCTCTCCGT 60.394 60.000 37.02 19.60 43.61 4.69
707 712 0.911769 TCGGAAGGTACCTCTCCGTA 59.088 55.000 37.02 28.55 43.61 4.02
708 713 1.281867 TCGGAAGGTACCTCTCCGTAA 59.718 52.381 37.02 27.26 43.61 3.18
709 714 1.674962 CGGAAGGTACCTCTCCGTAAG 59.325 57.143 34.17 19.88 38.94 2.34
710 715 2.732763 GGAAGGTACCTCTCCGTAAGT 58.267 52.381 16.64 0.00 0.00 2.24
711 716 3.682718 CGGAAGGTACCTCTCCGTAAGTA 60.683 52.174 34.17 0.00 38.94 2.24
712 717 4.468713 GGAAGGTACCTCTCCGTAAGTAT 58.531 47.826 16.64 0.00 0.00 2.12
713 718 4.518590 GGAAGGTACCTCTCCGTAAGTATC 59.481 50.000 16.64 4.01 0.00 2.24
714 719 3.737850 AGGTACCTCTCCGTAAGTATCG 58.262 50.000 9.21 0.00 0.00 2.92
715 720 3.135530 AGGTACCTCTCCGTAAGTATCGT 59.864 47.826 9.21 0.00 0.00 3.73
716 721 4.345257 AGGTACCTCTCCGTAAGTATCGTA 59.655 45.833 9.21 0.00 0.00 3.43
717 722 4.449405 GGTACCTCTCCGTAAGTATCGTAC 59.551 50.000 4.06 0.00 0.00 3.67
718 723 4.414337 ACCTCTCCGTAAGTATCGTACT 57.586 45.455 0.00 0.00 41.73 2.73
806 811 3.491792 CCGCTCTAGAACTTTCTCCATCC 60.492 52.174 0.00 0.00 38.70 3.51
921 936 3.151022 CTCCCTCCTCCTCGCCAC 61.151 72.222 0.00 0.00 0.00 5.01
944 959 0.684153 ATCCCCACCAAAGCATTCCG 60.684 55.000 0.00 0.00 0.00 4.30
971 1025 0.673437 CAACAAGCAATCCAACCCGT 59.327 50.000 0.00 0.00 0.00 5.28
1020 1088 2.367202 GGAGGGCAGGATGTTCGGA 61.367 63.158 0.00 0.00 39.31 4.55
1260 1355 4.803426 CAGGTGGAGGACGAGCGC 62.803 72.222 0.00 0.00 0.00 5.92
1426 1521 4.057428 GCGTGCTCACCGTCTCCT 62.057 66.667 0.00 0.00 0.00 3.69
1615 5114 3.569250 GGCTTCGCCTGAATAAAACAA 57.431 42.857 0.00 0.00 46.69 2.83
1618 5117 3.366374 GCTTCGCCTGAATAAAACAAGCT 60.366 43.478 0.00 0.00 32.61 3.74
1629 5136 8.635765 TGAATAAAACAAGCTAATCTCTTGGT 57.364 30.769 7.52 0.00 42.75 3.67
1664 5171 7.642071 ATTGAAAAATCCAAGATGTTCGTTG 57.358 32.000 0.00 0.00 0.00 4.10
1672 5179 4.511454 TCCAAGATGTTCGTTGAAGTTCTG 59.489 41.667 4.17 0.00 0.00 3.02
1681 5188 1.072331 GTTGAAGTTCTGAGAGGGCCA 59.928 52.381 6.18 0.00 0.00 5.36
1718 5227 4.324267 AGGAAACTGCGTTTGTAGCTTAT 58.676 39.130 10.61 0.00 41.13 1.73
1720 5229 4.153475 GGAAACTGCGTTTGTAGCTTATCA 59.847 41.667 10.61 0.00 35.77 2.15
1740 5249 9.757227 CTTATCAGAAAACTGGATAAGACTAGG 57.243 37.037 12.86 0.00 37.79 3.02
1793 5437 4.682860 CGAACTAGTTCCGAAGTGCTTTTA 59.317 41.667 26.12 0.00 36.27 1.52
1800 5444 3.745799 TCCGAAGTGCTTTTATCACCAA 58.254 40.909 0.00 0.00 35.14 3.67
1868 5520 5.124617 GTCTGGCTTTTGGGAAGATAGAAAG 59.875 44.000 0.00 0.00 0.00 2.62
1879 5531 5.760743 GGGAAGATAGAAAGAGGAAATTCCG 59.239 44.000 6.35 0.00 42.75 4.30
1944 5603 6.864685 TGAATGAAACATGTGAAATCTCTTGC 59.135 34.615 0.00 0.00 0.00 4.01
1955 6591 7.370383 TGTGAAATCTCTTGCCTACATTTTTC 58.630 34.615 0.00 0.00 0.00 2.29
1956 6592 7.014134 TGTGAAATCTCTTGCCTACATTTTTCA 59.986 33.333 0.00 0.00 0.00 2.69
1963 6599 9.905713 TCTCTTGCCTACATTTTTCATATTACT 57.094 29.630 0.00 0.00 0.00 2.24
1980 6619 8.892723 TCATATTACTCTTGGCTACATTTTGTG 58.107 33.333 0.00 0.00 0.00 3.33
1985 6624 7.145932 ACTCTTGGCTACATTTTGTGTAATC 57.854 36.000 0.00 0.00 42.50 1.75
1988 6627 8.263940 TCTTGGCTACATTTTGTGTAATCTAC 57.736 34.615 0.00 0.00 42.50 2.59
1990 6629 7.843490 TGGCTACATTTTGTGTAATCTACTC 57.157 36.000 0.00 0.00 42.50 2.59
1991 6630 6.821665 TGGCTACATTTTGTGTAATCTACTCC 59.178 38.462 0.00 0.00 42.50 3.85
1992 6631 6.260271 GGCTACATTTTGTGTAATCTACTCCC 59.740 42.308 0.00 0.00 42.50 4.30
1994 6633 7.224949 GCTACATTTTGTGTAATCTACTCCCTC 59.775 40.741 0.00 0.00 42.50 4.30
1996 6635 4.730949 TTTGTGTAATCTACTCCCTCGG 57.269 45.455 0.00 0.00 0.00 4.63
1998 6637 3.705051 TGTGTAATCTACTCCCTCGGTT 58.295 45.455 0.00 0.00 0.00 4.44
1999 6638 3.698040 TGTGTAATCTACTCCCTCGGTTC 59.302 47.826 0.00 0.00 0.00 3.62
2000 6639 3.067883 GTGTAATCTACTCCCTCGGTTCC 59.932 52.174 0.00 0.00 0.00 3.62
2002 6641 3.967467 AATCTACTCCCTCGGTTCCTA 57.033 47.619 0.00 0.00 0.00 2.94
2004 6643 3.744940 TCTACTCCCTCGGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
2005 6644 4.261411 TCTACTCCCTCGGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
2006 6645 5.393068 TCTACTCCCTCGGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
2007 6646 5.961897 TCTACTCCCTCGGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
2008 6647 6.379579 TCTACTCCCTCGGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
2009 6648 5.970501 ACTCCCTCGGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2010 6649 5.926663 ACTCCCTCGGTTCCTAAATATTTC 58.073 41.667 3.39 0.00 0.00 2.17
2012 6651 6.069847 ACTCCCTCGGTTCCTAAATATTTCAA 60.070 38.462 3.39 0.00 0.00 2.69
2013 6652 6.906848 TCCCTCGGTTCCTAAATATTTCAAT 58.093 36.000 3.39 0.00 0.00 2.57
2014 6653 7.351166 TCCCTCGGTTCCTAAATATTTCAATT 58.649 34.615 3.39 0.00 0.00 2.32
2015 6654 8.496088 TCCCTCGGTTCCTAAATATTTCAATTA 58.504 33.333 3.39 0.00 0.00 1.40
2033 6672 8.719560 TTCAATTAATAACTACATACGGTGCA 57.280 30.769 0.00 0.00 0.00 4.57
2034 6673 8.719560 TCAATTAATAACTACATACGGTGCAA 57.280 30.769 0.00 0.00 0.00 4.08
2035 6674 9.163899 TCAATTAATAACTACATACGGTGCAAA 57.836 29.630 0.00 0.00 0.00 3.68
2036 6675 9.776158 CAATTAATAACTACATACGGTGCAAAA 57.224 29.630 0.00 0.00 0.00 2.44
2038 6677 9.944663 ATTAATAACTACATACGGTGCAAAATG 57.055 29.630 0.00 0.00 0.00 2.32
2039 6678 4.695217 AACTACATACGGTGCAAAATGG 57.305 40.909 0.00 0.00 0.00 3.16
2040 6679 3.681593 ACTACATACGGTGCAAAATGGT 58.318 40.909 0.00 0.00 0.00 3.55
2041 6680 3.687698 ACTACATACGGTGCAAAATGGTC 59.312 43.478 0.00 0.00 0.00 4.02
2042 6681 2.790433 ACATACGGTGCAAAATGGTCT 58.210 42.857 0.00 0.00 0.00 3.85
2043 6682 3.153919 ACATACGGTGCAAAATGGTCTT 58.846 40.909 0.00 0.00 0.00 3.01
2044 6683 3.572255 ACATACGGTGCAAAATGGTCTTT 59.428 39.130 0.00 0.00 0.00 2.52
2045 6684 4.038642 ACATACGGTGCAAAATGGTCTTTT 59.961 37.500 0.00 0.00 0.00 2.27
2046 6685 3.535280 ACGGTGCAAAATGGTCTTTTT 57.465 38.095 0.00 0.00 0.00 1.94
2047 6686 4.657436 ACGGTGCAAAATGGTCTTTTTA 57.343 36.364 0.00 0.00 0.00 1.52
2048 6687 5.012328 ACGGTGCAAAATGGTCTTTTTAA 57.988 34.783 0.00 0.00 0.00 1.52
2049 6688 5.420409 ACGGTGCAAAATGGTCTTTTTAAA 58.580 33.333 0.00 0.00 0.00 1.52
2050 6689 6.052360 ACGGTGCAAAATGGTCTTTTTAAAT 58.948 32.000 0.00 0.00 0.00 1.40
2051 6690 7.210873 ACGGTGCAAAATGGTCTTTTTAAATA 58.789 30.769 0.00 0.00 0.00 1.40
2052 6691 7.875554 ACGGTGCAAAATGGTCTTTTTAAATAT 59.124 29.630 0.00 0.00 0.00 1.28
2053 6692 8.716909 CGGTGCAAAATGGTCTTTTTAAATATT 58.283 29.630 0.00 0.00 0.00 1.28
2088 6727 8.565896 AACTACATATGAAGCAAAATGAGTGA 57.434 30.769 10.38 0.00 0.00 3.41
2094 6733 9.661187 CATATGAAGCAAAATGAGTGAATCTAC 57.339 33.333 0.00 0.00 0.00 2.59
2096 6735 6.902341 TGAAGCAAAATGAGTGAATCTACAC 58.098 36.000 0.00 0.00 40.60 2.90
2097 6736 5.886960 AGCAAAATGAGTGAATCTACACC 57.113 39.130 0.00 0.00 41.12 4.16
2098 6737 4.702131 AGCAAAATGAGTGAATCTACACCC 59.298 41.667 0.00 0.00 41.12 4.61
2099 6738 4.702131 GCAAAATGAGTGAATCTACACCCT 59.298 41.667 0.00 0.00 41.12 4.34
2100 6739 5.880332 GCAAAATGAGTGAATCTACACCCTA 59.120 40.000 0.00 0.00 41.12 3.53
2102 6741 7.067494 GCAAAATGAGTGAATCTACACCCTAAT 59.933 37.037 0.00 0.00 41.12 1.73
2108 6936 9.601810 TGAGTGAATCTACACCCTAATATATGT 57.398 33.333 0.00 0.00 41.12 2.29
2142 6970 8.470002 CATCCGTATATGATAGTCCATCTGAAA 58.530 37.037 0.00 0.00 34.46 2.69
2143 6971 8.595362 TCCGTATATGATAGTCCATCTGAAAT 57.405 34.615 0.00 0.00 34.46 2.17
2145 6973 8.690884 CCGTATATGATAGTCCATCTGAAATCT 58.309 37.037 0.00 0.00 34.46 2.40
2152 6980 9.813826 TGATAGTCCATCTGAAATCTAGTATCA 57.186 33.333 0.00 0.00 34.46 2.15
2155 6983 6.268847 AGTCCATCTGAAATCTAGTATCACCC 59.731 42.308 0.00 0.00 0.00 4.61
2156 6984 5.544176 TCCATCTGAAATCTAGTATCACCCC 59.456 44.000 0.00 0.00 0.00 4.95
2158 6986 4.890988 TCTGAAATCTAGTATCACCCCCA 58.109 43.478 0.00 0.00 0.00 4.96
2159 6987 4.654262 TCTGAAATCTAGTATCACCCCCAC 59.346 45.833 0.00 0.00 0.00 4.61
2160 6988 3.714798 TGAAATCTAGTATCACCCCCACC 59.285 47.826 0.00 0.00 0.00 4.61
2161 6989 2.417719 ATCTAGTATCACCCCCACCC 57.582 55.000 0.00 0.00 0.00 4.61
2163 6991 0.267960 CTAGTATCACCCCCACCCCT 59.732 60.000 0.00 0.00 0.00 4.79
2164 6992 0.266753 TAGTATCACCCCCACCCCTC 59.733 60.000 0.00 0.00 0.00 4.30
2165 6993 2.076803 GTATCACCCCCACCCCTCC 61.077 68.421 0.00 0.00 0.00 4.30
2166 6994 3.356766 TATCACCCCCACCCCTCCC 62.357 68.421 0.00 0.00 0.00 4.30
2188 7016 3.150949 CCAGCCTCTGGTGACACA 58.849 61.111 8.08 0.00 45.82 3.72
2189 7017 1.004080 CCAGCCTCTGGTGACACAG 60.004 63.158 8.08 3.51 45.82 3.66
2195 7023 0.764890 CTCTGGTGACACAGGGGAAA 59.235 55.000 8.08 0.00 38.98 3.13
2196 7024 0.472471 TCTGGTGACACAGGGGAAAC 59.528 55.000 8.08 0.00 38.98 2.78
2197 7025 0.537371 CTGGTGACACAGGGGAAACC 60.537 60.000 8.08 0.00 43.90 3.27
2224 7052 4.547367 GCCGCTACAATCCGCCCT 62.547 66.667 0.00 0.00 0.00 5.19
2225 7053 2.280186 CCGCTACAATCCGCCCTC 60.280 66.667 0.00 0.00 0.00 4.30
2226 7054 2.658593 CGCTACAATCCGCCCTCG 60.659 66.667 0.00 0.00 0.00 4.63
2227 7055 2.499685 GCTACAATCCGCCCTCGT 59.500 61.111 0.00 0.00 0.00 4.18
2228 7056 1.591863 GCTACAATCCGCCCTCGTC 60.592 63.158 0.00 0.00 0.00 4.20
2229 7057 1.299165 CTACAATCCGCCCTCGTCG 60.299 63.158 0.00 0.00 0.00 5.12
2240 7068 4.821589 CTCGTCGCCCTTCCCTGC 62.822 72.222 0.00 0.00 0.00 4.85
2242 7070 4.473520 CGTCGCCCTTCCCTGCAT 62.474 66.667 0.00 0.00 0.00 3.96
2243 7071 2.514824 GTCGCCCTTCCCTGCATC 60.515 66.667 0.00 0.00 0.00 3.91
2244 7072 4.161295 TCGCCCTTCCCTGCATCG 62.161 66.667 0.00 0.00 0.00 3.84
2289 7117 3.217231 CCGTTGCGGTCCTAGGAT 58.783 61.111 16.27 0.00 42.73 3.24
2290 7118 1.227263 CCGTTGCGGTCCTAGGATG 60.227 63.158 16.27 12.07 42.73 3.51
2291 7119 1.227263 CGTTGCGGTCCTAGGATGG 60.227 63.158 16.27 11.10 0.00 3.51
2292 7120 1.523938 GTTGCGGTCCTAGGATGGC 60.524 63.158 23.18 23.18 0.00 4.40
2293 7121 3.088941 TTGCGGTCCTAGGATGGCG 62.089 63.158 23.85 8.26 0.00 5.69
2294 7122 4.301027 GCGGTCCTAGGATGGCGG 62.301 72.222 16.27 7.86 0.00 6.13
2295 7123 4.301027 CGGTCCTAGGATGGCGGC 62.301 72.222 16.27 0.00 0.00 6.53
2296 7124 4.301027 GGTCCTAGGATGGCGGCG 62.301 72.222 16.27 0.51 0.00 6.46
2321 7149 3.564218 GGATCTGGCCCCTCGCAT 61.564 66.667 0.00 0.00 40.31 4.73
2322 7150 2.281345 GATCTGGCCCCTCGCATG 60.281 66.667 0.00 0.00 40.31 4.06
2323 7151 4.575973 ATCTGGCCCCTCGCATGC 62.576 66.667 7.91 7.91 40.31 4.06
2328 7156 4.496336 GCCCCTCGCATGCTTCCT 62.496 66.667 17.13 0.00 37.47 3.36
2329 7157 2.203126 CCCCTCGCATGCTTCCTC 60.203 66.667 17.13 0.00 0.00 3.71
2330 7158 2.587194 CCCTCGCATGCTTCCTCG 60.587 66.667 17.13 0.00 0.00 4.63
2331 7159 3.267860 CCTCGCATGCTTCCTCGC 61.268 66.667 17.13 0.00 0.00 5.03
2332 7160 3.267860 CTCGCATGCTTCCTCGCC 61.268 66.667 17.13 0.00 0.00 5.54
2333 7161 4.081185 TCGCATGCTTCCTCGCCA 62.081 61.111 17.13 0.00 0.00 5.69
2334 7162 3.869272 CGCATGCTTCCTCGCCAC 61.869 66.667 17.13 0.00 0.00 5.01
2336 7164 2.046023 CATGCTTCCTCGCCACCA 60.046 61.111 0.00 0.00 0.00 4.17
2337 7165 1.452651 CATGCTTCCTCGCCACCAT 60.453 57.895 0.00 0.00 0.00 3.55
2338 7166 1.153086 ATGCTTCCTCGCCACCATC 60.153 57.895 0.00 0.00 0.00 3.51
2339 7167 2.514824 GCTTCCTCGCCACCATCC 60.515 66.667 0.00 0.00 0.00 3.51
2340 7168 2.190578 CTTCCTCGCCACCATCCC 59.809 66.667 0.00 0.00 0.00 3.85
2341 7169 3.740128 CTTCCTCGCCACCATCCCG 62.740 68.421 0.00 0.00 0.00 5.14
2344 7172 4.899239 CTCGCCACCATCCCGCTC 62.899 72.222 0.00 0.00 0.00 5.03
2347 7175 3.785859 GCCACCATCCCGCTCTGA 61.786 66.667 0.00 0.00 0.00 3.27
2348 7176 2.187946 CCACCATCCCGCTCTGAC 59.812 66.667 0.00 0.00 0.00 3.51
2351 7179 3.083349 CCATCCCGCTCTGACCCA 61.083 66.667 0.00 0.00 0.00 4.51
2352 7180 2.187946 CATCCCGCTCTGACCCAC 59.812 66.667 0.00 0.00 0.00 4.61
2353 7181 3.083997 ATCCCGCTCTGACCCACC 61.084 66.667 0.00 0.00 0.00 4.61
2372 7200 4.394712 CGCCCTGTCCCACCTCAC 62.395 72.222 0.00 0.00 0.00 3.51
2374 7202 3.330720 CCCTGTCCCACCTCACCC 61.331 72.222 0.00 0.00 0.00 4.61
2375 7203 3.330720 CCTGTCCCACCTCACCCC 61.331 72.222 0.00 0.00 0.00 4.95
2376 7204 3.706373 CTGTCCCACCTCACCCCG 61.706 72.222 0.00 0.00 0.00 5.73
2424 7252 3.114616 CTGTTCTGGCGTCGGCTG 61.115 66.667 20.29 19.03 39.81 4.85
2456 7284 4.827087 CGTGCTGCGAGGCTGGAT 62.827 66.667 0.00 0.00 44.77 3.41
2457 7285 2.894387 GTGCTGCGAGGCTGGATC 60.894 66.667 0.00 0.00 30.50 3.36
2458 7286 4.166888 TGCTGCGAGGCTGGATCC 62.167 66.667 4.20 4.20 0.00 3.36
2460 7288 4.598894 CTGCGAGGCTGGATCCGG 62.599 72.222 16.98 16.98 0.00 5.14
2467 7295 3.934962 GCTGGATCCGGCCTCTCC 61.935 72.222 32.19 6.08 42.15 3.71
2468 7296 2.123077 CTGGATCCGGCCTCTCCT 60.123 66.667 7.89 0.00 0.00 3.69
2470 7298 3.299190 GGATCCGGCCTCTCCTCG 61.299 72.222 0.00 0.00 0.00 4.63
2471 7299 3.984749 GATCCGGCCTCTCCTCGC 61.985 72.222 0.00 0.00 0.00 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 8.980832 ATCTATTACTCCTTCTGTCCCATAAT 57.019 34.615 0.00 0.00 0.00 1.28
5 6 9.535170 CTATCTATTACTCCTTCTGTCCCATAA 57.465 37.037 0.00 0.00 0.00 1.90
6 7 8.901841 TCTATCTATTACTCCTTCTGTCCCATA 58.098 37.037 0.00 0.00 0.00 2.74
7 8 7.770662 TCTATCTATTACTCCTTCTGTCCCAT 58.229 38.462 0.00 0.00 0.00 4.00
8 9 7.162973 TCTATCTATTACTCCTTCTGTCCCA 57.837 40.000 0.00 0.00 0.00 4.37
9 10 7.891183 TGATCTATCTATTACTCCTTCTGTCCC 59.109 40.741 0.00 0.00 0.00 4.46
10 11 8.871629 TGATCTATCTATTACTCCTTCTGTCC 57.128 38.462 0.00 0.00 0.00 4.02
24 25 9.698309 CAACCTTCACGTAAATGATCTATCTAT 57.302 33.333 0.00 0.00 0.00 1.98
25 26 8.141909 CCAACCTTCACGTAAATGATCTATCTA 58.858 37.037 0.00 0.00 0.00 1.98
26 27 6.986817 CCAACCTTCACGTAAATGATCTATCT 59.013 38.462 0.00 0.00 0.00 1.98
27 28 6.984474 TCCAACCTTCACGTAAATGATCTATC 59.016 38.462 0.00 0.00 0.00 2.08
28 29 6.884832 TCCAACCTTCACGTAAATGATCTAT 58.115 36.000 0.00 0.00 0.00 1.98
29 30 6.288941 TCCAACCTTCACGTAAATGATCTA 57.711 37.500 0.00 0.00 0.00 1.98
30 31 5.160607 TCCAACCTTCACGTAAATGATCT 57.839 39.130 0.00 0.00 0.00 2.75
31 32 5.873179 TTCCAACCTTCACGTAAATGATC 57.127 39.130 0.00 0.00 0.00 2.92
32 33 6.834168 ATTTCCAACCTTCACGTAAATGAT 57.166 33.333 0.00 0.00 0.00 2.45
33 34 7.747155 TTATTTCCAACCTTCACGTAAATGA 57.253 32.000 0.00 0.00 0.00 2.57
34 35 8.804688 TTTTATTTCCAACCTTCACGTAAATG 57.195 30.769 0.00 0.00 0.00 2.32
35 36 9.634163 GATTTTATTTCCAACCTTCACGTAAAT 57.366 29.630 0.00 0.00 0.00 1.40
36 37 8.852135 AGATTTTATTTCCAACCTTCACGTAAA 58.148 29.630 0.00 0.00 0.00 2.01
37 38 8.293867 CAGATTTTATTTCCAACCTTCACGTAA 58.706 33.333 0.00 0.00 0.00 3.18
38 39 7.094549 CCAGATTTTATTTCCAACCTTCACGTA 60.095 37.037 0.00 0.00 0.00 3.57
39 40 6.294508 CCAGATTTTATTTCCAACCTTCACGT 60.295 38.462 0.00 0.00 0.00 4.49
40 41 6.092748 CCAGATTTTATTTCCAACCTTCACG 58.907 40.000 0.00 0.00 0.00 4.35
41 42 6.210584 TCCCAGATTTTATTTCCAACCTTCAC 59.789 38.462 0.00 0.00 0.00 3.18
42 43 6.318913 TCCCAGATTTTATTTCCAACCTTCA 58.681 36.000 0.00 0.00 0.00 3.02
43 44 6.850752 TCCCAGATTTTATTTCCAACCTTC 57.149 37.500 0.00 0.00 0.00 3.46
44 45 8.909423 TTATCCCAGATTTTATTTCCAACCTT 57.091 30.769 0.00 0.00 0.00 3.50
45 46 8.909423 TTTATCCCAGATTTTATTTCCAACCT 57.091 30.769 0.00 0.00 0.00 3.50
46 47 9.952030 TTTTTATCCCAGATTTTATTTCCAACC 57.048 29.630 0.00 0.00 0.00 3.77
64 65 6.406961 CCCTAGCTTTTGGGATGTTTTTATCC 60.407 42.308 12.24 0.00 46.15 2.59
65 66 6.154534 ACCCTAGCTTTTGGGATGTTTTTATC 59.845 38.462 21.26 0.00 46.15 1.75
66 67 6.022958 ACCCTAGCTTTTGGGATGTTTTTAT 58.977 36.000 21.26 0.00 46.15 1.40
67 68 5.399113 ACCCTAGCTTTTGGGATGTTTTTA 58.601 37.500 21.26 0.00 46.15 1.52
68 69 4.231273 ACCCTAGCTTTTGGGATGTTTTT 58.769 39.130 21.26 0.00 46.15 1.94
69 70 3.856900 ACCCTAGCTTTTGGGATGTTTT 58.143 40.909 21.26 0.45 46.15 2.43
70 71 3.542969 ACCCTAGCTTTTGGGATGTTT 57.457 42.857 21.26 1.05 46.15 2.83
71 72 4.881157 ATACCCTAGCTTTTGGGATGTT 57.119 40.909 21.26 5.90 46.15 2.71
72 73 7.642094 TTATATACCCTAGCTTTTGGGATGT 57.358 36.000 21.26 9.88 46.15 3.06
77 78 8.903820 GCCATAATTATATACCCTAGCTTTTGG 58.096 37.037 0.00 0.00 0.00 3.28
78 79 9.461312 TGCCATAATTATATACCCTAGCTTTTG 57.539 33.333 0.00 0.00 0.00 2.44
81 82 9.632638 CATTGCCATAATTATATACCCTAGCTT 57.367 33.333 0.00 0.00 0.00 3.74
82 83 8.781951 ACATTGCCATAATTATATACCCTAGCT 58.218 33.333 0.00 0.00 0.00 3.32
83 84 8.980481 ACATTGCCATAATTATATACCCTAGC 57.020 34.615 0.00 0.00 0.00 3.42
93 94 8.306761 GGCTTAGCTAAACATTGCCATAATTAT 58.693 33.333 22.35 0.00 38.79 1.28
94 95 7.286546 TGGCTTAGCTAAACATTGCCATAATTA 59.713 33.333 24.81 8.15 43.09 1.40
95 96 6.098124 TGGCTTAGCTAAACATTGCCATAATT 59.902 34.615 24.81 0.00 43.09 1.40
96 97 5.598005 TGGCTTAGCTAAACATTGCCATAAT 59.402 36.000 24.81 0.00 43.09 1.28
97 98 4.952957 TGGCTTAGCTAAACATTGCCATAA 59.047 37.500 24.81 9.31 43.09 1.90
98 99 4.531854 TGGCTTAGCTAAACATTGCCATA 58.468 39.130 24.81 9.89 43.09 2.74
99 100 3.364549 TGGCTTAGCTAAACATTGCCAT 58.635 40.909 24.81 0.00 43.09 4.40
100 101 2.801483 TGGCTTAGCTAAACATTGCCA 58.199 42.857 24.81 24.81 45.31 4.92
101 102 3.633986 AGATGGCTTAGCTAAACATTGCC 59.366 43.478 21.12 21.12 39.33 4.52
102 103 4.604976 CAGATGGCTTAGCTAAACATTGC 58.395 43.478 18.89 13.23 0.00 3.56
103 104 4.604976 GCAGATGGCTTAGCTAAACATTG 58.395 43.478 18.89 17.92 40.25 2.82
104 105 4.907879 GCAGATGGCTTAGCTAAACATT 57.092 40.909 18.89 10.15 40.25 2.71
136 137 2.810274 TCACACATTGCTTCAGAGAAGC 59.190 45.455 21.38 21.38 43.29 3.86
137 138 4.514441 AGTTCACACATTGCTTCAGAGAAG 59.486 41.667 2.48 2.48 0.00 2.85
138 139 4.274214 CAGTTCACACATTGCTTCAGAGAA 59.726 41.667 0.00 0.00 0.00 2.87
139 140 3.811497 CAGTTCACACATTGCTTCAGAGA 59.189 43.478 0.00 0.00 0.00 3.10
140 141 3.811497 TCAGTTCACACATTGCTTCAGAG 59.189 43.478 0.00 0.00 0.00 3.35
141 142 3.807553 TCAGTTCACACATTGCTTCAGA 58.192 40.909 0.00 0.00 0.00 3.27
142 143 4.036027 AGTTCAGTTCACACATTGCTTCAG 59.964 41.667 0.00 0.00 0.00 3.02
143 144 3.947196 AGTTCAGTTCACACATTGCTTCA 59.053 39.130 0.00 0.00 0.00 3.02
144 145 4.558538 AGTTCAGTTCACACATTGCTTC 57.441 40.909 0.00 0.00 0.00 3.86
145 146 4.989279 AAGTTCAGTTCACACATTGCTT 57.011 36.364 0.00 0.00 0.00 3.91
146 147 4.989279 AAAGTTCAGTTCACACATTGCT 57.011 36.364 0.00 0.00 0.00 3.91
147 148 4.259930 GCAAAAGTTCAGTTCACACATTGC 60.260 41.667 0.00 0.00 32.20 3.56
148 149 4.863689 TGCAAAAGTTCAGTTCACACATTG 59.136 37.500 0.00 0.00 0.00 2.82
149 150 5.070770 TGCAAAAGTTCAGTTCACACATT 57.929 34.783 0.00 0.00 0.00 2.71
150 151 4.717233 TGCAAAAGTTCAGTTCACACAT 57.283 36.364 0.00 0.00 0.00 3.21
151 152 4.511617 TTGCAAAAGTTCAGTTCACACA 57.488 36.364 0.00 0.00 0.00 3.72
152 153 5.837586 TTTTGCAAAAGTTCAGTTCACAC 57.162 34.783 20.46 0.00 0.00 3.82
153 154 5.580297 GGATTTTGCAAAAGTTCAGTTCACA 59.420 36.000 27.08 2.43 0.00 3.58
154 155 5.006649 GGGATTTTGCAAAAGTTCAGTTCAC 59.993 40.000 27.08 16.29 0.00 3.18
155 156 5.115480 GGGATTTTGCAAAAGTTCAGTTCA 58.885 37.500 27.08 3.15 0.00 3.18
156 157 5.115480 TGGGATTTTGCAAAAGTTCAGTTC 58.885 37.500 27.08 17.90 0.00 3.01
157 158 5.096443 TGGGATTTTGCAAAAGTTCAGTT 57.904 34.783 27.08 10.81 0.00 3.16
158 159 4.751767 TGGGATTTTGCAAAAGTTCAGT 57.248 36.364 27.08 11.51 0.00 3.41
159 160 7.098477 TGATATGGGATTTTGCAAAAGTTCAG 58.902 34.615 27.08 0.00 0.00 3.02
160 161 7.002250 TGATATGGGATTTTGCAAAAGTTCA 57.998 32.000 27.08 22.52 0.00 3.18
161 162 7.603784 ACTTGATATGGGATTTTGCAAAAGTTC 59.396 33.333 27.08 20.43 0.00 3.01
162 163 7.452562 ACTTGATATGGGATTTTGCAAAAGTT 58.547 30.769 27.08 13.66 0.00 2.66
163 164 7.008021 ACTTGATATGGGATTTTGCAAAAGT 57.992 32.000 27.08 16.31 0.00 2.66
164 165 7.325694 AGACTTGATATGGGATTTTGCAAAAG 58.674 34.615 27.08 12.93 0.00 2.27
165 166 7.243604 AGACTTGATATGGGATTTTGCAAAA 57.756 32.000 25.76 25.76 0.00 2.44
166 167 6.855763 AGACTTGATATGGGATTTTGCAAA 57.144 33.333 8.05 8.05 0.00 3.68
167 168 6.855763 AAGACTTGATATGGGATTTTGCAA 57.144 33.333 0.00 0.00 0.00 4.08
168 169 6.632909 CAAAGACTTGATATGGGATTTTGCA 58.367 36.000 0.00 0.00 34.14 4.08
169 170 5.521372 GCAAAGACTTGATATGGGATTTTGC 59.479 40.000 2.88 2.88 40.38 3.68
170 171 6.532657 GTGCAAAGACTTGATATGGGATTTTG 59.467 38.462 0.00 0.00 34.14 2.44
171 172 6.438425 AGTGCAAAGACTTGATATGGGATTTT 59.562 34.615 0.00 0.00 34.14 1.82
172 173 5.954150 AGTGCAAAGACTTGATATGGGATTT 59.046 36.000 0.00 0.00 34.14 2.17
173 174 5.513233 AGTGCAAAGACTTGATATGGGATT 58.487 37.500 0.00 0.00 34.14 3.01
174 175 5.104193 AGAGTGCAAAGACTTGATATGGGAT 60.104 40.000 0.00 0.00 34.14 3.85
175 176 4.225942 AGAGTGCAAAGACTTGATATGGGA 59.774 41.667 0.00 0.00 34.14 4.37
176 177 4.521146 AGAGTGCAAAGACTTGATATGGG 58.479 43.478 0.00 0.00 34.14 4.00
177 178 6.344500 AGTAGAGTGCAAAGACTTGATATGG 58.656 40.000 0.00 0.00 34.14 2.74
178 179 9.190858 GATAGTAGAGTGCAAAGACTTGATATG 57.809 37.037 0.00 0.00 34.14 1.78
179 180 8.079203 CGATAGTAGAGTGCAAAGACTTGATAT 58.921 37.037 0.00 0.00 34.14 1.63
180 181 7.418408 CGATAGTAGAGTGCAAAGACTTGATA 58.582 38.462 0.00 0.00 34.14 2.15
181 182 6.269315 CGATAGTAGAGTGCAAAGACTTGAT 58.731 40.000 0.00 0.00 34.14 2.57
182 183 5.641709 CGATAGTAGAGTGCAAAGACTTGA 58.358 41.667 0.00 0.00 34.14 3.02
183 184 5.940603 CGATAGTAGAGTGCAAAGACTTG 57.059 43.478 0.00 0.00 35.49 3.16
197 198 9.789713 TCAATCTTGATGTCGCCACGATAGTAG 62.790 44.444 0.00 0.00 39.04 2.57
198 199 8.119736 TCAATCTTGATGTCGCCACGATAGTA 62.120 42.308 0.00 0.00 39.04 1.82
199 200 7.402959 TCAATCTTGATGTCGCCACGATAGT 62.403 44.000 0.00 0.00 41.05 2.12
200 201 2.492019 TCTTGATGTCGCCACGATAG 57.508 50.000 0.00 0.00 38.42 2.08
201 202 3.123050 CAATCTTGATGTCGCCACGATA 58.877 45.455 0.00 0.00 38.42 2.92
202 203 1.935873 CAATCTTGATGTCGCCACGAT 59.064 47.619 0.00 0.00 38.42 3.73
203 204 1.067213 TCAATCTTGATGTCGCCACGA 60.067 47.619 0.00 0.00 31.01 4.35
204 205 1.325640 CTCAATCTTGATGTCGCCACG 59.674 52.381 0.00 0.00 36.46 4.94
205 206 1.667724 CCTCAATCTTGATGTCGCCAC 59.332 52.381 0.00 0.00 36.46 5.01
206 207 1.278985 ACCTCAATCTTGATGTCGCCA 59.721 47.619 0.00 0.00 36.46 5.69
207 208 2.029838 ACCTCAATCTTGATGTCGCC 57.970 50.000 0.00 0.00 36.46 5.54
208 209 3.265791 AGAACCTCAATCTTGATGTCGC 58.734 45.455 2.05 0.00 35.45 5.19
209 210 4.753233 AGAGAACCTCAATCTTGATGTCG 58.247 43.478 2.05 0.00 35.45 4.35
210 211 6.652481 TCAAAGAGAACCTCAATCTTGATGTC 59.348 38.462 2.05 0.00 35.45 3.06
211 212 6.537355 TCAAAGAGAACCTCAATCTTGATGT 58.463 36.000 0.00 0.00 37.59 3.06
212 213 7.627298 ATCAAAGAGAACCTCAATCTTGATG 57.373 36.000 0.00 0.00 36.46 3.07
213 214 7.886970 TGAATCAAAGAGAACCTCAATCTTGAT 59.113 33.333 0.00 0.00 36.46 2.57
214 215 7.226441 TGAATCAAAGAGAACCTCAATCTTGA 58.774 34.615 0.00 0.00 33.67 3.02
215 216 7.444629 TGAATCAAAGAGAACCTCAATCTTG 57.555 36.000 0.00 0.00 33.67 3.02
216 217 9.745018 TTATGAATCAAAGAGAACCTCAATCTT 57.255 29.630 0.00 0.00 34.81 2.40
217 218 9.393512 CTTATGAATCAAAGAGAACCTCAATCT 57.606 33.333 0.00 0.00 32.06 2.40
218 219 9.388506 TCTTATGAATCAAAGAGAACCTCAATC 57.611 33.333 0.00 0.00 32.06 2.67
219 220 9.917887 ATCTTATGAATCAAAGAGAACCTCAAT 57.082 29.630 11.40 0.00 35.32 2.57
220 221 9.745018 AATCTTATGAATCAAAGAGAACCTCAA 57.255 29.630 11.40 0.00 35.32 3.02
221 222 9.388506 GAATCTTATGAATCAAAGAGAACCTCA 57.611 33.333 11.40 0.00 35.32 3.86
222 223 9.612066 AGAATCTTATGAATCAAAGAGAACCTC 57.388 33.333 11.40 0.00 35.32 3.85
223 224 9.612066 GAGAATCTTATGAATCAAAGAGAACCT 57.388 33.333 11.40 6.26 35.32 3.50
224 225 8.547069 CGAGAATCTTATGAATCAAAGAGAACC 58.453 37.037 11.40 2.95 35.32 3.62
225 226 9.307121 TCGAGAATCTTATGAATCAAAGAGAAC 57.693 33.333 11.40 7.11 35.32 3.01
226 227 9.875691 TTCGAGAATCTTATGAATCAAAGAGAA 57.124 29.630 11.40 7.66 35.32 2.87
227 228 9.875691 TTTCGAGAATCTTATGAATCAAAGAGA 57.124 29.630 11.40 5.47 35.32 3.10
228 229 9.913451 GTTTCGAGAATCTTATGAATCAAAGAG 57.087 33.333 11.40 1.09 35.32 2.85
229 230 8.595533 CGTTTCGAGAATCTTATGAATCAAAGA 58.404 33.333 9.20 9.20 36.24 2.52
230 231 7.371875 GCGTTTCGAGAATCTTATGAATCAAAG 59.628 37.037 0.00 0.00 0.00 2.77
231 232 7.180079 GCGTTTCGAGAATCTTATGAATCAAA 58.820 34.615 0.00 0.00 0.00 2.69
232 233 6.507929 CGCGTTTCGAGAATCTTATGAATCAA 60.508 38.462 0.00 0.00 41.67 2.57
233 234 5.051708 CGCGTTTCGAGAATCTTATGAATCA 60.052 40.000 0.00 0.00 41.67 2.57
234 235 5.358691 CGCGTTTCGAGAATCTTATGAATC 58.641 41.667 0.00 0.00 41.67 2.52
235 236 4.209288 CCGCGTTTCGAGAATCTTATGAAT 59.791 41.667 4.92 0.00 41.67 2.57
236 237 3.550275 CCGCGTTTCGAGAATCTTATGAA 59.450 43.478 4.92 0.00 41.67 2.57
237 238 3.113322 CCGCGTTTCGAGAATCTTATGA 58.887 45.455 4.92 0.00 41.67 2.15
238 239 3.113322 TCCGCGTTTCGAGAATCTTATG 58.887 45.455 4.92 0.00 41.67 1.90
239 240 3.431922 TCCGCGTTTCGAGAATCTTAT 57.568 42.857 4.92 0.00 41.67 1.73
240 241 2.925578 TCCGCGTTTCGAGAATCTTA 57.074 45.000 4.92 0.00 41.67 2.10
241 242 2.074547 TTCCGCGTTTCGAGAATCTT 57.925 45.000 4.92 0.00 41.67 2.40
242 243 2.074547 TTTCCGCGTTTCGAGAATCT 57.925 45.000 4.92 0.00 41.67 2.40
243 244 3.060473 CCTATTTCCGCGTTTCGAGAATC 60.060 47.826 4.92 0.00 41.67 2.52
244 245 2.864343 CCTATTTCCGCGTTTCGAGAAT 59.136 45.455 4.92 1.41 41.67 2.40
245 246 2.094597 TCCTATTTCCGCGTTTCGAGAA 60.095 45.455 4.92 0.00 41.67 2.87
246 247 1.473677 TCCTATTTCCGCGTTTCGAGA 59.526 47.619 4.92 0.00 41.67 4.04
247 248 1.917273 TCCTATTTCCGCGTTTCGAG 58.083 50.000 4.92 0.00 41.67 4.04
248 249 2.367030 TTCCTATTTCCGCGTTTCGA 57.633 45.000 4.92 0.00 41.67 3.71
249 250 3.458779 TTTTCCTATTTCCGCGTTTCG 57.541 42.857 4.92 0.00 38.08 3.46
250 251 7.008901 CCTTTATTTTTCCTATTTCCGCGTTTC 59.991 37.037 4.92 0.00 0.00 2.78
251 252 6.809689 CCTTTATTTTTCCTATTTCCGCGTTT 59.190 34.615 4.92 0.00 0.00 3.60
252 253 6.327154 CCTTTATTTTTCCTATTTCCGCGTT 58.673 36.000 4.92 0.00 0.00 4.84
253 254 5.163591 CCCTTTATTTTTCCTATTTCCGCGT 60.164 40.000 4.92 0.00 0.00 6.01
254 255 5.163591 ACCCTTTATTTTTCCTATTTCCGCG 60.164 40.000 0.00 0.00 0.00 6.46
255 256 6.216801 ACCCTTTATTTTTCCTATTTCCGC 57.783 37.500 0.00 0.00 0.00 5.54
256 257 9.181061 TCTAACCCTTTATTTTTCCTATTTCCG 57.819 33.333 0.00 0.00 0.00 4.30
260 261 9.475620 CCACTCTAACCCTTTATTTTTCCTATT 57.524 33.333 0.00 0.00 0.00 1.73
261 262 7.560262 GCCACTCTAACCCTTTATTTTTCCTAT 59.440 37.037 0.00 0.00 0.00 2.57
262 263 6.888088 GCCACTCTAACCCTTTATTTTTCCTA 59.112 38.462 0.00 0.00 0.00 2.94
263 264 5.715279 GCCACTCTAACCCTTTATTTTTCCT 59.285 40.000 0.00 0.00 0.00 3.36
264 265 5.479027 TGCCACTCTAACCCTTTATTTTTCC 59.521 40.000 0.00 0.00 0.00 3.13
265 266 6.584185 TGCCACTCTAACCCTTTATTTTTC 57.416 37.500 0.00 0.00 0.00 2.29
266 267 6.496911 ACATGCCACTCTAACCCTTTATTTTT 59.503 34.615 0.00 0.00 0.00 1.94
267 268 6.016555 ACATGCCACTCTAACCCTTTATTTT 58.983 36.000 0.00 0.00 0.00 1.82
268 269 5.580022 ACATGCCACTCTAACCCTTTATTT 58.420 37.500 0.00 0.00 0.00 1.40
269 270 5.193099 ACATGCCACTCTAACCCTTTATT 57.807 39.130 0.00 0.00 0.00 1.40
270 271 4.385310 GGACATGCCACTCTAACCCTTTAT 60.385 45.833 0.00 0.00 36.34 1.40
271 272 3.054655 GGACATGCCACTCTAACCCTTTA 60.055 47.826 0.00 0.00 36.34 1.85
272 273 2.290960 GGACATGCCACTCTAACCCTTT 60.291 50.000 0.00 0.00 36.34 3.11
273 274 1.282157 GGACATGCCACTCTAACCCTT 59.718 52.381 0.00 0.00 36.34 3.95
274 275 0.912486 GGACATGCCACTCTAACCCT 59.088 55.000 0.00 0.00 36.34 4.34
275 276 0.618458 TGGACATGCCACTCTAACCC 59.382 55.000 4.93 0.00 43.33 4.11
284 285 2.042297 TGGGATTAAAGTGGACATGCCA 59.958 45.455 4.93 4.93 46.96 4.92
285 286 2.733956 TGGGATTAAAGTGGACATGCC 58.266 47.619 0.00 0.00 37.10 4.40
286 287 6.294731 GGATTATGGGATTAAAGTGGACATGC 60.295 42.308 0.00 0.00 0.00 4.06
287 288 6.209391 GGGATTATGGGATTAAAGTGGACATG 59.791 42.308 0.00 0.00 0.00 3.21
288 289 6.125919 TGGGATTATGGGATTAAAGTGGACAT 60.126 38.462 0.00 0.00 0.00 3.06
289 290 5.194740 TGGGATTATGGGATTAAAGTGGACA 59.805 40.000 0.00 0.00 0.00 4.02
290 291 5.701224 TGGGATTATGGGATTAAAGTGGAC 58.299 41.667 0.00 0.00 0.00 4.02
291 292 6.544327 ATGGGATTATGGGATTAAAGTGGA 57.456 37.500 0.00 0.00 0.00 4.02
292 293 6.891908 CCTATGGGATTATGGGATTAAAGTGG 59.108 42.308 0.00 0.00 30.81 4.00
293 294 7.698912 TCCTATGGGATTATGGGATTAAAGTG 58.301 38.462 0.00 0.00 36.57 3.16
294 295 7.905144 TCCTATGGGATTATGGGATTAAAGT 57.095 36.000 0.00 0.00 36.57 2.66
315 316 8.757877 TGGCATTAAAAACTTTATGCTAATCCT 58.242 29.630 0.00 0.00 35.57 3.24
316 317 8.817100 GTGGCATTAAAAACTTTATGCTAATCC 58.183 33.333 0.00 0.00 35.57 3.01
317 318 9.364989 TGTGGCATTAAAAACTTTATGCTAATC 57.635 29.630 0.00 0.00 35.57 1.75
318 319 9.369904 CTGTGGCATTAAAAACTTTATGCTAAT 57.630 29.630 0.00 0.00 35.57 1.73
319 320 8.580720 TCTGTGGCATTAAAAACTTTATGCTAA 58.419 29.630 0.00 0.00 35.57 3.09
320 321 8.116651 TCTGTGGCATTAAAAACTTTATGCTA 57.883 30.769 0.00 0.00 35.57 3.49
321 322 6.991938 TCTGTGGCATTAAAAACTTTATGCT 58.008 32.000 0.00 0.00 35.57 3.79
322 323 7.650834 TTCTGTGGCATTAAAAACTTTATGC 57.349 32.000 0.00 0.00 0.00 3.14
346 347 6.721668 CCTCCCTCTTCACTTCCTTTATTTTT 59.278 38.462 0.00 0.00 0.00 1.94
347 348 6.183361 ACCTCCCTCTTCACTTCCTTTATTTT 60.183 38.462 0.00 0.00 0.00 1.82
348 349 5.313506 ACCTCCCTCTTCACTTCCTTTATTT 59.686 40.000 0.00 0.00 0.00 1.40
349 350 4.852697 ACCTCCCTCTTCACTTCCTTTATT 59.147 41.667 0.00 0.00 0.00 1.40
350 351 4.439860 ACCTCCCTCTTCACTTCCTTTAT 58.560 43.478 0.00 0.00 0.00 1.40
351 352 3.870559 ACCTCCCTCTTCACTTCCTTTA 58.129 45.455 0.00 0.00 0.00 1.85
352 353 2.707554 ACCTCCCTCTTCACTTCCTTT 58.292 47.619 0.00 0.00 0.00 3.11
353 354 2.424684 ACCTCCCTCTTCACTTCCTT 57.575 50.000 0.00 0.00 0.00 3.36
354 355 2.424684 AACCTCCCTCTTCACTTCCT 57.575 50.000 0.00 0.00 0.00 3.36
355 356 3.442076 TCTAACCTCCCTCTTCACTTCC 58.558 50.000 0.00 0.00 0.00 3.46
356 357 4.090819 ACTCTAACCTCCCTCTTCACTTC 58.909 47.826 0.00 0.00 0.00 3.01
357 358 4.134933 ACTCTAACCTCCCTCTTCACTT 57.865 45.455 0.00 0.00 0.00 3.16
358 359 3.837399 ACTCTAACCTCCCTCTTCACT 57.163 47.619 0.00 0.00 0.00 3.41
359 360 4.857679 TCTACTCTAACCTCCCTCTTCAC 58.142 47.826 0.00 0.00 0.00 3.18
360 361 5.450453 CATCTACTCTAACCTCCCTCTTCA 58.550 45.833 0.00 0.00 0.00 3.02
361 362 4.279922 GCATCTACTCTAACCTCCCTCTTC 59.720 50.000 0.00 0.00 0.00 2.87
362 363 4.078863 AGCATCTACTCTAACCTCCCTCTT 60.079 45.833 0.00 0.00 0.00 2.85
363 364 3.465588 AGCATCTACTCTAACCTCCCTCT 59.534 47.826 0.00 0.00 0.00 3.69
364 365 3.572255 CAGCATCTACTCTAACCTCCCTC 59.428 52.174 0.00 0.00 0.00 4.30
365 366 3.571590 CAGCATCTACTCTAACCTCCCT 58.428 50.000 0.00 0.00 0.00 4.20
366 367 2.630580 CCAGCATCTACTCTAACCTCCC 59.369 54.545 0.00 0.00 0.00 4.30
367 368 3.567397 TCCAGCATCTACTCTAACCTCC 58.433 50.000 0.00 0.00 0.00 4.30
368 369 4.586841 ACATCCAGCATCTACTCTAACCTC 59.413 45.833 0.00 0.00 0.00 3.85
369 370 4.551671 ACATCCAGCATCTACTCTAACCT 58.448 43.478 0.00 0.00 0.00 3.50
370 371 4.946478 ACATCCAGCATCTACTCTAACC 57.054 45.455 0.00 0.00 0.00 2.85
371 372 5.907207 TGAACATCCAGCATCTACTCTAAC 58.093 41.667 0.00 0.00 0.00 2.34
372 373 6.544928 TTGAACATCCAGCATCTACTCTAA 57.455 37.500 0.00 0.00 0.00 2.10
373 374 6.324770 TCATTGAACATCCAGCATCTACTCTA 59.675 38.462 0.00 0.00 0.00 2.43
374 375 5.129980 TCATTGAACATCCAGCATCTACTCT 59.870 40.000 0.00 0.00 0.00 3.24
375 376 5.363101 TCATTGAACATCCAGCATCTACTC 58.637 41.667 0.00 0.00 0.00 2.59
376 377 5.363562 TCATTGAACATCCAGCATCTACT 57.636 39.130 0.00 0.00 0.00 2.57
377 378 6.441093 TTTCATTGAACATCCAGCATCTAC 57.559 37.500 0.00 0.00 0.00 2.59
378 379 6.604396 ACATTTCATTGAACATCCAGCATCTA 59.396 34.615 0.00 0.00 0.00 1.98
379 380 5.421056 ACATTTCATTGAACATCCAGCATCT 59.579 36.000 0.00 0.00 0.00 2.90
380 381 5.657474 ACATTTCATTGAACATCCAGCATC 58.343 37.500 0.00 0.00 0.00 3.91
381 382 5.670792 ACATTTCATTGAACATCCAGCAT 57.329 34.783 0.00 0.00 0.00 3.79
382 383 5.711506 AGTACATTTCATTGAACATCCAGCA 59.288 36.000 0.00 0.00 0.00 4.41
383 384 6.199937 AGTACATTTCATTGAACATCCAGC 57.800 37.500 0.00 0.00 0.00 4.85
384 385 8.607459 GTCTAGTACATTTCATTGAACATCCAG 58.393 37.037 0.00 0.00 0.00 3.86
385 386 8.100164 TGTCTAGTACATTTCATTGAACATCCA 58.900 33.333 0.00 0.00 31.43 3.41
386 387 8.492673 TGTCTAGTACATTTCATTGAACATCC 57.507 34.615 0.00 0.00 31.43 3.51
447 448 9.511272 CCTACATTGATCATTTGATTCATAGGA 57.489 33.333 11.88 0.00 34.37 2.94
448 449 9.511272 TCCTACATTGATCATTTGATTCATAGG 57.489 33.333 11.88 11.10 34.37 2.57
468 469 9.901172 GGGTAAGAATTCTTAGAAATTCCTACA 57.099 33.333 24.92 1.66 43.59 2.74
471 472 8.275758 GGAGGGTAAGAATTCTTAGAAATTCCT 58.724 37.037 24.92 21.39 43.59 3.36
472 473 8.053355 TGGAGGGTAAGAATTCTTAGAAATTCC 58.947 37.037 24.92 23.31 43.59 3.01
473 474 9.462606 TTGGAGGGTAAGAATTCTTAGAAATTC 57.537 33.333 24.92 17.39 43.12 2.17
474 475 9.822727 TTTGGAGGGTAAGAATTCTTAGAAATT 57.177 29.630 24.92 11.35 38.94 1.82
475 476 9.997172 ATTTGGAGGGTAAGAATTCTTAGAAAT 57.003 29.630 24.92 17.64 38.94 2.17
490 491 9.807921 GGAATTTCATAGAATATTTGGAGGGTA 57.192 33.333 0.00 0.00 0.00 3.69
491 492 8.514504 AGGAATTTCATAGAATATTTGGAGGGT 58.485 33.333 0.00 0.00 0.00 4.34
492 493 8.946797 AGGAATTTCATAGAATATTTGGAGGG 57.053 34.615 0.00 0.00 0.00 4.30
517 518 4.156556 CGATCAAGGCTCCTTTGATTCAAA 59.843 41.667 11.19 11.19 33.42 2.69
518 519 3.691118 CGATCAAGGCTCCTTTGATTCAA 59.309 43.478 0.00 0.00 33.42 2.69
519 520 3.273434 CGATCAAGGCTCCTTTGATTCA 58.727 45.455 0.00 0.00 33.42 2.57
520 521 2.032675 GCGATCAAGGCTCCTTTGATTC 59.967 50.000 0.00 0.64 33.42 2.52
521 522 2.019984 GCGATCAAGGCTCCTTTGATT 58.980 47.619 0.00 0.00 33.42 2.57
522 523 1.065199 TGCGATCAAGGCTCCTTTGAT 60.065 47.619 0.00 5.99 33.42 2.57
523 524 0.324614 TGCGATCAAGGCTCCTTTGA 59.675 50.000 0.00 1.49 33.42 2.69
524 525 1.332997 GATGCGATCAAGGCTCCTTTG 59.667 52.381 0.00 0.00 33.42 2.77
525 526 1.673168 GATGCGATCAAGGCTCCTTT 58.327 50.000 0.00 0.00 33.42 3.11
526 527 0.179034 GGATGCGATCAAGGCTCCTT 60.179 55.000 0.00 0.00 36.60 3.36
527 528 1.340399 TGGATGCGATCAAGGCTCCT 61.340 55.000 0.00 0.00 32.46 3.69
528 529 1.146930 TGGATGCGATCAAGGCTCC 59.853 57.895 0.00 0.00 0.00 4.70
529 530 1.162800 GGTGGATGCGATCAAGGCTC 61.163 60.000 0.00 0.00 0.00 4.70
530 531 1.153086 GGTGGATGCGATCAAGGCT 60.153 57.895 0.00 0.00 0.00 4.58
531 532 2.537560 CGGTGGATGCGATCAAGGC 61.538 63.158 0.00 0.00 0.00 4.35
532 533 2.537560 GCGGTGGATGCGATCAAGG 61.538 63.158 0.00 0.00 0.00 3.61
533 534 1.162181 ATGCGGTGGATGCGATCAAG 61.162 55.000 0.00 0.00 34.24 3.02
534 535 0.105778 TATGCGGTGGATGCGATCAA 59.894 50.000 0.00 0.00 34.24 2.57
535 536 0.105778 TTATGCGGTGGATGCGATCA 59.894 50.000 0.00 0.00 34.24 2.92
536 537 1.129251 CATTATGCGGTGGATGCGATC 59.871 52.381 0.00 0.00 34.24 3.69
537 538 1.159285 CATTATGCGGTGGATGCGAT 58.841 50.000 0.00 0.00 34.24 4.58
538 539 0.179059 ACATTATGCGGTGGATGCGA 60.179 50.000 0.00 0.00 34.24 5.10
539 540 0.662619 AACATTATGCGGTGGATGCG 59.337 50.000 0.00 0.00 34.24 4.73
540 541 3.980646 TTAACATTATGCGGTGGATGC 57.019 42.857 0.00 0.00 0.00 3.91
541 542 4.797471 CCATTAACATTATGCGGTGGATG 58.203 43.478 0.00 0.00 0.00 3.51
542 543 3.255642 GCCATTAACATTATGCGGTGGAT 59.744 43.478 9.58 0.00 0.00 3.41
543 544 2.621055 GCCATTAACATTATGCGGTGGA 59.379 45.455 9.58 0.00 0.00 4.02
544 545 2.360483 TGCCATTAACATTATGCGGTGG 59.640 45.455 0.00 0.00 0.00 4.61
545 546 3.066621 ACTGCCATTAACATTATGCGGTG 59.933 43.478 0.00 0.00 36.98 4.94
546 547 3.287222 ACTGCCATTAACATTATGCGGT 58.713 40.909 0.00 0.00 33.72 5.68
547 548 3.988379 ACTGCCATTAACATTATGCGG 57.012 42.857 0.00 0.00 0.00 5.69
548 549 7.928908 AAATTACTGCCATTAACATTATGCG 57.071 32.000 0.00 0.00 0.00 4.73
549 550 9.965824 AGTAAATTACTGCCATTAACATTATGC 57.034 29.630 4.66 0.00 37.69 3.14
565 566 7.115947 GCAGACTCGTGTAAACAGTAAATTACT 59.884 37.037 0.00 0.00 40.28 2.24
566 567 7.095940 TGCAGACTCGTGTAAACAGTAAATTAC 60.096 37.037 0.00 0.00 33.59 1.89
567 568 6.924612 TGCAGACTCGTGTAAACAGTAAATTA 59.075 34.615 0.00 0.00 0.00 1.40
568 569 5.756347 TGCAGACTCGTGTAAACAGTAAATT 59.244 36.000 0.00 0.00 0.00 1.82
569 570 5.294356 TGCAGACTCGTGTAAACAGTAAAT 58.706 37.500 0.00 0.00 0.00 1.40
570 571 4.684877 TGCAGACTCGTGTAAACAGTAAA 58.315 39.130 0.00 0.00 0.00 2.01
571 572 4.310357 TGCAGACTCGTGTAAACAGTAA 57.690 40.909 0.00 0.00 0.00 2.24
572 573 3.994204 TGCAGACTCGTGTAAACAGTA 57.006 42.857 0.00 0.00 0.00 2.74
573 574 2.882927 TGCAGACTCGTGTAAACAGT 57.117 45.000 0.00 0.00 0.00 3.55
574 575 4.732285 AAATGCAGACTCGTGTAAACAG 57.268 40.909 0.00 0.00 0.00 3.16
575 576 5.756347 AGTTAAATGCAGACTCGTGTAAACA 59.244 36.000 0.00 0.00 0.00 2.83
576 577 6.224420 AGTTAAATGCAGACTCGTGTAAAC 57.776 37.500 0.00 0.00 0.00 2.01
577 578 6.854496 AAGTTAAATGCAGACTCGTGTAAA 57.146 33.333 0.00 0.00 0.00 2.01
578 579 6.293190 CCAAAGTTAAATGCAGACTCGTGTAA 60.293 38.462 0.00 0.00 0.00 2.41
579 580 5.178623 CCAAAGTTAAATGCAGACTCGTGTA 59.821 40.000 0.00 0.00 0.00 2.90
580 581 4.024048 CCAAAGTTAAATGCAGACTCGTGT 60.024 41.667 0.00 0.00 0.00 4.49
581 582 4.213270 TCCAAAGTTAAATGCAGACTCGTG 59.787 41.667 0.00 0.00 0.00 4.35
582 583 4.385825 TCCAAAGTTAAATGCAGACTCGT 58.614 39.130 0.00 0.00 0.00 4.18
583 584 5.356882 TTCCAAAGTTAAATGCAGACTCG 57.643 39.130 0.00 0.00 0.00 4.18
615 616 9.720667 GGTACTTAAAATTTTGAACGTGTTAGT 57.279 29.630 13.76 0.27 0.00 2.24
616 617 9.940166 AGGTACTTAAAATTTTGAACGTGTTAG 57.060 29.630 13.76 0.00 27.25 2.34
623 624 7.868775 ACGGAGAGGTACTTAAAATTTTGAAC 58.131 34.615 13.76 1.72 41.55 3.18
631 632 7.336931 ACGATACTTACGGAGAGGTACTTAAAA 59.663 37.037 0.00 0.00 34.71 1.52
637 638 5.293560 ACTACGATACTTACGGAGAGGTAC 58.706 45.833 6.56 0.00 43.42 3.34
646 647 4.637483 TTCCCCAACTACGATACTTACG 57.363 45.455 0.00 0.00 0.00 3.18
690 695 2.732763 ACTTACGGAGAGGTACCTTCC 58.267 52.381 17.53 21.22 0.00 3.46
696 701 5.537300 AGTACGATACTTACGGAGAGGTA 57.463 43.478 0.00 0.00 34.86 3.08
697 702 4.414337 AGTACGATACTTACGGAGAGGT 57.586 45.455 0.00 0.00 34.86 3.85
706 711 5.449041 CCGGCAAGTGTAAGTACGATACTTA 60.449 44.000 10.94 11.27 46.53 2.24
708 713 3.181493 CCGGCAAGTGTAAGTACGATACT 60.181 47.826 11.51 4.49 41.73 2.12
709 714 3.111098 CCGGCAAGTGTAAGTACGATAC 58.889 50.000 0.00 5.27 0.00 2.24
710 715 2.754552 ACCGGCAAGTGTAAGTACGATA 59.245 45.455 0.00 0.00 0.00 2.92
711 716 1.547372 ACCGGCAAGTGTAAGTACGAT 59.453 47.619 0.00 0.00 0.00 3.73
712 717 0.961019 ACCGGCAAGTGTAAGTACGA 59.039 50.000 0.00 0.00 0.00 3.43
713 718 1.458064 CAACCGGCAAGTGTAAGTACG 59.542 52.381 0.00 0.00 0.00 3.67
714 719 1.196127 GCAACCGGCAAGTGTAAGTAC 59.804 52.381 0.00 0.00 43.97 2.73
715 720 1.515081 GCAACCGGCAAGTGTAAGTA 58.485 50.000 0.00 0.00 43.97 2.24
716 721 2.327228 GCAACCGGCAAGTGTAAGT 58.673 52.632 0.00 0.00 43.97 2.24
717 722 1.169661 TGGCAACCGGCAAGTGTAAG 61.170 55.000 0.00 0.00 46.20 2.34
718 723 1.152943 TGGCAACCGGCAAGTGTAA 60.153 52.632 0.00 0.00 46.20 2.41
719 724 2.511403 TGGCAACCGGCAAGTGTA 59.489 55.556 0.00 0.00 46.20 2.90
806 811 1.751927 AGGGAGTACTACCGCCGTG 60.752 63.158 18.87 0.00 39.08 4.94
921 936 3.451894 GCTTTGGTGGGGATGCGG 61.452 66.667 0.00 0.00 0.00 5.69
944 959 5.207033 GTTGGATTGCTTGTTGAATTTTGC 58.793 37.500 0.00 0.00 0.00 3.68
971 1025 3.197549 TCGGTGATTGTGATTGATCTCCA 59.802 43.478 0.00 0.00 36.29 3.86
1020 1088 2.039624 ATCAGCGGGGTCTCCAGT 59.960 61.111 0.00 0.00 34.36 4.00
1260 1355 3.027170 GCCGCTGATCACCAACACG 62.027 63.158 0.00 0.00 0.00 4.49
1264 1359 2.125552 CTCGCCGCTGATCACCAA 60.126 61.111 0.00 0.00 0.00 3.67
1449 1544 0.555769 TGGTCTTGGGCTTCTTGGTT 59.444 50.000 0.00 0.00 0.00 3.67
1450 1545 0.779997 ATGGTCTTGGGCTTCTTGGT 59.220 50.000 0.00 0.00 0.00 3.67
1493 4896 1.197988 GATTCGACGCGCACACGATA 61.198 55.000 18.00 11.21 43.93 2.92
1615 5114 6.479884 AGAAAATGTGACCAAGAGATTAGCT 58.520 36.000 0.00 0.00 0.00 3.32
1618 5117 9.958180 TCAATAGAAAATGTGACCAAGAGATTA 57.042 29.630 0.00 0.00 0.00 1.75
1664 5171 1.280421 ACATGGCCCTCTCAGAACTTC 59.720 52.381 0.00 0.00 0.00 3.01
1672 5179 2.496899 TTTCAGAACATGGCCCTCTC 57.503 50.000 0.00 0.00 0.00 3.20
1720 5229 7.741554 ATGTCCTAGTCTTATCCAGTTTTCT 57.258 36.000 0.00 0.00 0.00 2.52
1740 5249 6.476706 GCACCTAATTTGCTATTCCAAATGTC 59.523 38.462 1.39 0.00 42.78 3.06
1793 5437 4.044571 TCCAGGATTTTTCTCCTTGGTGAT 59.955 41.667 0.00 0.00 43.33 3.06
1800 5444 5.259632 CAAGACATCCAGGATTTTTCTCCT 58.740 41.667 0.00 0.00 46.92 3.69
1868 5520 6.113411 TCTCAATTCTAACCGGAATTTCCTC 58.887 40.000 9.46 0.00 42.02 3.71
1944 5603 9.125026 AGCCAAGAGTAATATGAAAAATGTAGG 57.875 33.333 0.00 0.00 0.00 3.18
1955 6591 8.677300 ACACAAAATGTAGCCAAGAGTAATATG 58.323 33.333 0.00 0.00 40.88 1.78
1956 6592 8.807948 ACACAAAATGTAGCCAAGAGTAATAT 57.192 30.769 0.00 0.00 40.88 1.28
1961 6597 6.942576 AGATTACACAAAATGTAGCCAAGAGT 59.057 34.615 0.00 0.00 44.68 3.24
1962 6598 7.383102 AGATTACACAAAATGTAGCCAAGAG 57.617 36.000 0.00 0.00 44.68 2.85
1963 6599 8.100791 AGTAGATTACACAAAATGTAGCCAAGA 58.899 33.333 0.00 0.00 44.68 3.02
1978 6617 3.067883 GGAACCGAGGGAGTAGATTACAC 59.932 52.174 0.00 0.00 0.00 2.90
1980 6619 3.564264 AGGAACCGAGGGAGTAGATTAC 58.436 50.000 0.00 0.00 0.00 1.89
1985 6624 6.667558 AATATTTAGGAACCGAGGGAGTAG 57.332 41.667 0.00 0.00 0.00 2.57
1988 6627 5.925509 TGAAATATTTAGGAACCGAGGGAG 58.074 41.667 0.00 0.00 0.00 4.30
1990 6629 7.582667 AATTGAAATATTTAGGAACCGAGGG 57.417 36.000 0.00 0.00 0.00 4.30
2007 6646 9.163899 TGCACCGTATGTAGTTATTAATTGAAA 57.836 29.630 0.00 0.00 0.00 2.69
2008 6647 8.719560 TGCACCGTATGTAGTTATTAATTGAA 57.280 30.769 0.00 0.00 0.00 2.69
2009 6648 8.719560 TTGCACCGTATGTAGTTATTAATTGA 57.280 30.769 0.00 0.00 0.00 2.57
2010 6649 9.776158 TTTTGCACCGTATGTAGTTATTAATTG 57.224 29.630 0.00 0.00 0.00 2.32
2012 6651 9.944663 CATTTTGCACCGTATGTAGTTATTAAT 57.055 29.630 0.00 0.00 0.00 1.40
2013 6652 8.399425 CCATTTTGCACCGTATGTAGTTATTAA 58.601 33.333 0.00 0.00 0.00 1.40
2014 6653 7.553402 ACCATTTTGCACCGTATGTAGTTATTA 59.447 33.333 0.00 0.00 0.00 0.98
2015 6654 6.376018 ACCATTTTGCACCGTATGTAGTTATT 59.624 34.615 0.00 0.00 0.00 1.40
2017 6656 5.247084 ACCATTTTGCACCGTATGTAGTTA 58.753 37.500 0.00 0.00 0.00 2.24
2019 6658 3.681593 ACCATTTTGCACCGTATGTAGT 58.318 40.909 0.00 0.00 0.00 2.73
2020 6659 3.938963 AGACCATTTTGCACCGTATGTAG 59.061 43.478 0.00 0.00 0.00 2.74
2021 6660 3.945346 AGACCATTTTGCACCGTATGTA 58.055 40.909 0.00 0.00 0.00 2.29
2022 6661 2.790433 AGACCATTTTGCACCGTATGT 58.210 42.857 0.00 0.00 0.00 2.29
2023 6662 3.848272 AAGACCATTTTGCACCGTATG 57.152 42.857 0.00 0.00 0.00 2.39
2024 6663 4.864704 AAAAGACCATTTTGCACCGTAT 57.135 36.364 0.00 0.00 0.00 3.06
2025 6664 4.657436 AAAAAGACCATTTTGCACCGTA 57.343 36.364 0.00 0.00 31.55 4.02
2026 6665 3.535280 AAAAAGACCATTTTGCACCGT 57.465 38.095 0.00 0.00 31.55 4.83
2027 6666 5.975410 TTTAAAAAGACCATTTTGCACCG 57.025 34.783 0.00 0.00 34.51 4.94
2062 6701 9.665719 TCACTCATTTTGCTTCATATGTAGTTA 57.334 29.630 10.61 0.00 0.00 2.24
2065 6704 9.661187 GATTCACTCATTTTGCTTCATATGTAG 57.339 33.333 5.04 5.04 0.00 2.74
2068 6707 9.661187 GTAGATTCACTCATTTTGCTTCATATG 57.339 33.333 0.00 0.00 0.00 1.78
2070 6709 8.668353 GTGTAGATTCACTCATTTTGCTTCATA 58.332 33.333 0.00 0.00 35.68 2.15
2074 6713 5.183904 GGGTGTAGATTCACTCATTTTGCTT 59.816 40.000 0.00 0.00 38.54 3.91
2075 6714 4.702131 GGGTGTAGATTCACTCATTTTGCT 59.298 41.667 0.00 0.00 38.54 3.91
2076 6715 4.702131 AGGGTGTAGATTCACTCATTTTGC 59.298 41.667 0.00 0.00 40.86 3.68
2082 6721 9.601810 ACATATATTAGGGTGTAGATTCACTCA 57.398 33.333 0.00 0.00 40.86 3.41
2084 6723 9.830186 AGACATATATTAGGGTGTAGATTCACT 57.170 33.333 0.00 0.00 38.28 3.41
2119 6947 8.690884 AGATTTCAGATGGACTATCATATACGG 58.309 37.037 1.30 0.00 38.31 4.02
2126 6954 9.813826 TGATACTAGATTTCAGATGGACTATCA 57.186 33.333 0.00 0.00 38.31 2.15
2128 6956 9.030452 GGTGATACTAGATTTCAGATGGACTAT 57.970 37.037 0.00 0.00 0.00 2.12
2130 6958 6.268847 GGGTGATACTAGATTTCAGATGGACT 59.731 42.308 0.00 0.00 0.00 3.85
2131 6959 6.459923 GGGTGATACTAGATTTCAGATGGAC 58.540 44.000 0.00 0.00 0.00 4.02
2135 6963 5.308237 GTGGGGGTGATACTAGATTTCAGAT 59.692 44.000 0.00 0.00 0.00 2.90
2137 6965 4.202367 GGTGGGGGTGATACTAGATTTCAG 60.202 50.000 0.00 0.00 0.00 3.02
2142 6970 1.132495 GGGGTGGGGGTGATACTAGAT 60.132 57.143 0.00 0.00 0.00 1.98
2143 6971 0.266753 GGGGTGGGGGTGATACTAGA 59.733 60.000 0.00 0.00 0.00 2.43
2145 6973 0.266753 GAGGGGTGGGGGTGATACTA 59.733 60.000 0.00 0.00 0.00 1.82
2146 6974 1.004361 GAGGGGTGGGGGTGATACT 59.996 63.158 0.00 0.00 0.00 2.12
2147 6975 2.076803 GGAGGGGTGGGGGTGATAC 61.077 68.421 0.00 0.00 0.00 2.24
2148 6976 2.375173 GGAGGGGTGGGGGTGATA 59.625 66.667 0.00 0.00 0.00 2.15
2172 7000 1.004080 CCTGTGTCACCAGAGGCTG 60.004 63.158 0.00 0.00 44.34 4.85
2173 7001 3.476386 CCTGTGTCACCAGAGGCT 58.524 61.111 0.00 0.00 44.34 4.58
2176 7004 0.764890 TTTCCCCTGTGTCACCAGAG 59.235 55.000 0.00 0.00 34.23 3.35
2177 7005 0.472471 GTTTCCCCTGTGTCACCAGA 59.528 55.000 0.00 0.00 34.23 3.86
2178 7006 0.537371 GGTTTCCCCTGTGTCACCAG 60.537 60.000 0.00 0.00 0.00 4.00
2179 7007 1.534697 GGTTTCCCCTGTGTCACCA 59.465 57.895 0.00 0.00 0.00 4.17
2180 7008 4.494515 GGTTTCCCCTGTGTCACC 57.505 61.111 0.00 0.00 0.00 4.02
2207 7035 4.547367 AGGGCGGATTGTAGCGGC 62.547 66.667 0.00 0.00 0.00 6.53
2208 7036 2.280186 GAGGGCGGATTGTAGCGG 60.280 66.667 0.00 0.00 0.00 5.52
2209 7037 2.658593 CGAGGGCGGATTGTAGCG 60.659 66.667 0.00 0.00 0.00 4.26
2210 7038 1.591863 GACGAGGGCGGATTGTAGC 60.592 63.158 0.00 0.00 43.17 3.58
2211 7039 1.299165 CGACGAGGGCGGATTGTAG 60.299 63.158 0.00 0.00 43.17 2.74
2212 7040 2.802792 CGACGAGGGCGGATTGTA 59.197 61.111 0.00 0.00 43.17 2.41
2222 7050 4.148825 CAGGGAAGGGCGACGAGG 62.149 72.222 0.00 0.00 0.00 4.63
2223 7051 4.821589 GCAGGGAAGGGCGACGAG 62.822 72.222 0.00 0.00 0.00 4.18
2225 7053 4.473520 ATGCAGGGAAGGGCGACG 62.474 66.667 0.00 0.00 0.00 5.12
2226 7054 2.514824 GATGCAGGGAAGGGCGAC 60.515 66.667 0.00 0.00 0.00 5.19
2227 7055 4.161295 CGATGCAGGGAAGGGCGA 62.161 66.667 0.00 0.00 0.00 5.54
2274 7102 1.523938 GCCATCCTAGGACCGCAAC 60.524 63.158 15.42 0.00 0.00 4.17
2275 7103 2.908015 GCCATCCTAGGACCGCAA 59.092 61.111 15.42 0.00 0.00 4.85
2276 7104 3.536917 CGCCATCCTAGGACCGCA 61.537 66.667 24.56 1.47 0.00 5.69
2277 7105 4.301027 CCGCCATCCTAGGACCGC 62.301 72.222 15.42 17.15 0.00 5.68
2278 7106 4.301027 GCCGCCATCCTAGGACCG 62.301 72.222 15.42 16.48 0.00 4.79
2279 7107 4.301027 CGCCGCCATCCTAGGACC 62.301 72.222 15.42 4.70 0.00 4.46
2280 7108 4.301027 CCGCCGCCATCCTAGGAC 62.301 72.222 15.42 0.00 0.00 3.85
2304 7132 3.564218 ATGCGAGGGGCCAGATCC 61.564 66.667 4.39 0.00 42.61 3.36
2306 7134 4.575973 GCATGCGAGGGGCCAGAT 62.576 66.667 4.39 0.00 42.61 2.90
2308 7136 4.809496 AAGCATGCGAGGGGCCAG 62.809 66.667 13.01 0.00 42.61 4.85
2309 7137 4.802051 GAAGCATGCGAGGGGCCA 62.802 66.667 13.01 0.00 42.61 5.36
2311 7139 4.496336 AGGAAGCATGCGAGGGGC 62.496 66.667 13.01 0.00 43.96 5.80
2312 7140 2.203126 GAGGAAGCATGCGAGGGG 60.203 66.667 13.01 0.00 0.00 4.79
2314 7142 3.267860 GCGAGGAAGCATGCGAGG 61.268 66.667 13.01 1.01 37.05 4.63
2315 7143 3.267860 GGCGAGGAAGCATGCGAG 61.268 66.667 13.01 2.55 39.27 5.03
2316 7144 4.081185 TGGCGAGGAAGCATGCGA 62.081 61.111 13.01 0.00 39.27 5.10
2317 7145 3.869272 GTGGCGAGGAAGCATGCG 61.869 66.667 13.01 0.00 39.27 4.73
2318 7146 3.512516 GGTGGCGAGGAAGCATGC 61.513 66.667 10.51 10.51 39.27 4.06
2319 7147 1.442526 GATGGTGGCGAGGAAGCATG 61.443 60.000 0.00 0.00 39.27 4.06
2320 7148 1.153086 GATGGTGGCGAGGAAGCAT 60.153 57.895 0.00 0.00 39.27 3.79
2321 7149 2.268920 GATGGTGGCGAGGAAGCA 59.731 61.111 0.00 0.00 39.27 3.91
2322 7150 2.514824 GGATGGTGGCGAGGAAGC 60.515 66.667 0.00 0.00 0.00 3.86
2323 7151 2.190578 GGGATGGTGGCGAGGAAG 59.809 66.667 0.00 0.00 0.00 3.46
2324 7152 3.781307 CGGGATGGTGGCGAGGAA 61.781 66.667 0.00 0.00 0.00 3.36
2327 7155 4.899239 GAGCGGGATGGTGGCGAG 62.899 72.222 0.00 0.00 0.00 5.03
2330 7158 3.785859 TCAGAGCGGGATGGTGGC 61.786 66.667 0.00 0.00 0.00 5.01
2331 7159 2.187946 GTCAGAGCGGGATGGTGG 59.812 66.667 0.00 0.00 0.00 4.61
2332 7160 2.187946 GGTCAGAGCGGGATGGTG 59.812 66.667 0.00 0.00 0.00 4.17
2333 7161 3.083997 GGGTCAGAGCGGGATGGT 61.084 66.667 0.00 0.00 0.00 3.55
2334 7162 3.083349 TGGGTCAGAGCGGGATGG 61.083 66.667 0.00 0.00 0.00 3.51
2336 7164 3.083997 GGTGGGTCAGAGCGGGAT 61.084 66.667 0.00 0.00 0.00 3.85
2355 7183 4.394712 GTGAGGTGGGACAGGGCG 62.395 72.222 0.00 0.00 41.80 6.13
2356 7184 4.035102 GGTGAGGTGGGACAGGGC 62.035 72.222 0.00 0.00 41.80 5.19
2359 7187 3.706373 CGGGGTGAGGTGGGACAG 61.706 72.222 0.00 0.00 41.80 3.51
2401 7229 4.379243 ACGCCAGAACAGCCGGAG 62.379 66.667 5.05 0.00 0.00 4.63
2439 7267 4.827087 ATCCAGCCTCGCAGCACG 62.827 66.667 0.00 0.00 45.62 5.34
2440 7268 2.894387 GATCCAGCCTCGCAGCAC 60.894 66.667 0.00 0.00 34.23 4.40
2450 7278 3.934962 GGAGAGGCCGGATCCAGC 61.935 72.222 11.84 11.84 33.08 4.85
2451 7279 2.123077 AGGAGAGGCCGGATCCAG 60.123 66.667 21.44 0.36 43.43 3.86
2453 7281 3.299190 CGAGGAGAGGCCGGATCC 61.299 72.222 5.05 14.19 43.43 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.