Multiple sequence alignment - TraesCS3D01G110500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G110500 chr3D 100.000 4131 0 0 1 4131 64197070 64192940 0.000000e+00 7629.0
1 TraesCS3D01G110500 chr3D 93.182 88 3 2 2211 2298 477907359 477907443 4.340000e-25 126.0
2 TraesCS3D01G110500 chr3A 89.803 2030 137 28 2 1990 74368083 74366083 0.000000e+00 2538.0
3 TraesCS3D01G110500 chr3A 87.816 673 63 13 2475 3142 74365720 74365062 0.000000e+00 771.0
4 TraesCS3D01G110500 chr3A 88.161 397 44 3 3160 3555 74365078 74364684 1.740000e-128 470.0
5 TraesCS3D01G110500 chr3A 93.574 249 15 1 3722 3969 74364581 74364333 1.810000e-98 370.0
6 TraesCS3D01G110500 chr3A 87.391 230 18 5 1990 2210 74365969 74365742 1.910000e-63 254.0
7 TraesCS3D01G110500 chr3A 95.385 130 6 0 4002 4131 74363657 74363528 1.510000e-49 207.0
8 TraesCS3D01G110500 chr3B 90.681 837 37 21 749 1556 106422765 106421941 0.000000e+00 1075.0
9 TraesCS3D01G110500 chr3B 95.130 575 28 0 1636 2210 106421936 106421362 0.000000e+00 907.0
10 TraesCS3D01G110500 chr3B 94.203 552 26 3 2596 3146 106420996 106420450 0.000000e+00 837.0
11 TraesCS3D01G110500 chr3B 93.333 495 25 7 3640 4131 106420053 106419564 0.000000e+00 725.0
12 TraesCS3D01G110500 chr3B 95.238 294 13 1 3160 3452 106420470 106420177 8.090000e-127 464.0
13 TraesCS3D01G110500 chr3B 88.272 324 28 6 188 501 106453668 106453345 3.010000e-101 379.0
14 TraesCS3D01G110500 chr3B 89.879 247 25 0 507 753 106450894 106450648 6.660000e-83 318.0
15 TraesCS3D01G110500 chr3B 70.697 703 179 13 41 721 694266721 694266024 9.320000e-27 132.0
16 TraesCS3D01G110500 chr3B 93.182 88 3 2 2211 2298 637089697 637089781 4.340000e-25 126.0
17 TraesCS3D01G110500 chr3B 71.875 480 109 17 41 499 776543661 776543187 9.380000e-22 115.0
18 TraesCS3D01G110500 chr3B 94.915 59 3 0 3497 3555 106420172 106420114 4.400000e-15 93.5
19 TraesCS3D01G110500 chr3B 97.917 48 0 1 2547 2594 106421149 106421103 9.520000e-12 82.4
20 TraesCS3D01G110500 chr3B 88.525 61 6 1 3584 3644 823579282 823579223 5.730000e-09 73.1
21 TraesCS3D01G110500 chr7D 97.633 169 4 0 2294 2462 203494536 203494704 1.450000e-74 291.0
22 TraesCS3D01G110500 chr7D 97.633 169 4 0 2294 2462 381914515 381914683 1.450000e-74 291.0
23 TraesCS3D01G110500 chr6D 97.633 169 4 0 2294 2462 124512061 124512229 1.450000e-74 291.0
24 TraesCS3D01G110500 chr6D 96.512 172 6 0 2294 2465 283227992 283227821 6.760000e-73 285.0
25 TraesCS3D01G110500 chr6D 73.333 480 107 15 41 501 119108877 119108400 1.540000e-34 158.0
26 TraesCS3D01G110500 chrUn 96.512 172 6 0 2294 2465 413529747 413529576 6.760000e-73 285.0
27 TraesCS3D01G110500 chrUn 95.930 172 7 0 2294 2465 402628634 402628463 3.140000e-71 279.0
28 TraesCS3D01G110500 chr7B 96.512 172 6 0 2294 2465 716844926 716844755 6.760000e-73 285.0
29 TraesCS3D01G110500 chr7A 96.512 172 6 0 2294 2465 686657833 686657662 6.760000e-73 285.0
30 TraesCS3D01G110500 chr7A 100.000 29 0 0 3910 3938 696546769 696546797 2.000000e-03 54.7
31 TraesCS3D01G110500 chr4D 97.041 169 5 0 2294 2462 123298252 123298420 6.760000e-73 285.0
32 TraesCS3D01G110500 chr4D 71.366 688 170 19 41 712 103256622 103257298 1.990000e-33 154.0
33 TraesCS3D01G110500 chr2B 78.904 365 62 10 3 357 789600840 789601199 2.480000e-57 233.0
34 TraesCS3D01G110500 chr1D 71.449 697 168 24 41 713 50915037 50914348 5.530000e-34 156.0
35 TraesCS3D01G110500 chr1D 77.228 303 38 23 997 1288 18077401 18077683 9.250000e-32 148.0
36 TraesCS3D01G110500 chr1D 94.565 92 1 3 2211 2301 101285232 101285144 5.570000e-29 139.0
37 TraesCS3D01G110500 chr1D 93.617 47 3 0 3591 3637 365438995 365438949 2.060000e-08 71.3
38 TraesCS3D01G110500 chr4B 92.000 100 3 4 2207 2305 41531504 41531409 7.200000e-28 135.0
39 TraesCS3D01G110500 chr4B 89.216 102 5 4 2197 2298 163758226 163758321 5.610000e-24 122.0
40 TraesCS3D01G110500 chr1A 92.391 92 3 3 2211 2301 104216463 104216551 1.210000e-25 128.0
41 TraesCS3D01G110500 chr1A 100.000 28 0 0 3914 3941 49974275 49974302 7.000000e-03 52.8
42 TraesCS3D01G110500 chr4A 93.182 88 3 2 2211 2298 27643610 27643526 4.340000e-25 126.0
43 TraesCS3D01G110500 chr2D 93.182 88 3 2 2211 2298 86080913 86080997 4.340000e-25 126.0
44 TraesCS3D01G110500 chr1B 89.691 97 6 3 2211 2307 593785896 593785988 2.020000e-23 121.0
45 TraesCS3D01G110500 chr5D 88.889 54 3 3 3591 3641 428475278 428475331 3.450000e-06 63.9
46 TraesCS3D01G110500 chr2A 85.246 61 3 4 3590 3644 20860868 20860928 1.600000e-04 58.4
47 TraesCS3D01G110500 chr5A 100.000 28 0 0 3914 3941 578440206 578440233 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G110500 chr3D 64192940 64197070 4130 True 7629.000000 7629 100.000000 1 4131 1 chr3D.!!$R1 4130
1 TraesCS3D01G110500 chr3A 74363528 74368083 4555 True 768.333333 2538 90.355000 2 4131 6 chr3A.!!$R1 4129
2 TraesCS3D01G110500 chr3B 106419564 106422765 3201 True 597.700000 1075 94.488143 749 4131 7 chr3B.!!$R4 3382
3 TraesCS3D01G110500 chr3B 106450648 106453668 3020 True 348.500000 379 89.075500 188 753 2 chr3B.!!$R5 565

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
68 69 0.036765 AAGATGCAAGCGTTCCGGTA 60.037 50.0 0.00 0.0 36.27 4.02 F
176 178 0.109873 ACGTCTAGAAAGCCGTGTCG 60.110 55.0 5.43 0.0 35.70 4.35 F
308 318 0.250727 CACAAATGGACTCGTGGGGT 60.251 55.0 0.00 0.0 0.00 4.95 F
958 3448 0.319040 GCAGTCTCGCAGAACAGTCA 60.319 55.0 0.00 0.0 34.09 3.41 F
2413 5138 0.319083 AACCTTCGTATGGTGACGCA 59.681 50.0 0.00 0.0 42.62 5.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1836 4357 0.183014 ATCAGGCCATGCTTCTCCAG 59.817 55.000 5.01 0.00 0.00 3.86 R
2009 4646 5.332808 GCAAATGCAAATGTTCAGAACTGAC 60.333 40.000 14.51 2.68 39.12 3.51 R
2302 5027 4.630894 TGAGCGTGATTTGTCAAAAAGT 57.369 36.364 1.31 0.00 0.00 2.66 R
2439 5164 0.178992 AAAACAGGTGCAGCAGGCTA 60.179 50.000 19.63 0.00 45.15 3.93 R
3662 6534 0.607489 GATAGCTCCGCCATTGCCAT 60.607 55.000 0.00 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 3.165875 AGAGACTGGAAATCGAAGGTCA 58.834 45.455 0.00 0.00 0.00 4.02
40 41 4.223923 AGAGACTGGAAATCGAAGGTCAAT 59.776 41.667 0.00 0.00 0.00 2.57
47 48 0.527817 ATCGAAGGTCAATCGCCGTC 60.528 55.000 0.00 0.00 40.04 4.79
57 58 2.260126 TCGCCGTCGAAGATGCAA 59.740 55.556 0.00 0.00 43.31 4.08
59 60 2.401195 GCCGTCGAAGATGCAAGC 59.599 61.111 0.00 0.00 43.31 4.01
66 67 1.425428 GAAGATGCAAGCGTTCCGG 59.575 57.895 0.00 0.00 0.00 5.14
68 69 0.036765 AAGATGCAAGCGTTCCGGTA 60.037 50.000 0.00 0.00 36.27 4.02
72 73 0.947180 TGCAAGCGTTCCGGTACTTC 60.947 55.000 9.70 1.28 36.27 3.01
74 75 0.320073 CAAGCGTTCCGGTACTTCCA 60.320 55.000 9.70 0.00 36.27 3.53
98 99 1.296715 ACCAAGCGGTGAGGATGAC 59.703 57.895 12.70 0.00 46.79 3.06
103 104 2.808315 CGGTGAGGATGACGAGGG 59.192 66.667 0.00 0.00 0.00 4.30
107 108 0.179097 GTGAGGATGACGAGGGAAGC 60.179 60.000 0.00 0.00 0.00 3.86
110 111 1.144936 GGATGACGAGGGAAGCCAG 59.855 63.158 0.00 0.00 0.00 4.85
119 120 2.747855 GGAAGCCAGTCCCTTGCG 60.748 66.667 0.00 0.00 0.00 4.85
130 131 2.105128 CCTTGCGAGTAGGAGCGG 59.895 66.667 0.00 0.00 34.56 5.52
174 176 3.491581 CACGTCTAGAAAGCCGTGT 57.508 52.632 19.85 0.00 46.94 4.49
176 178 0.109873 ACGTCTAGAAAGCCGTGTCG 60.110 55.000 5.43 0.00 35.70 4.35
186 188 2.452813 GCCGTGTCGCTATGTGGTG 61.453 63.158 0.00 0.00 0.00 4.17
238 248 3.594134 CAAATCTGCCGAGAGAAAGAGT 58.406 45.455 0.00 0.00 0.00 3.24
258 268 0.403271 AGCCTGCCAAGAGATGTTGT 59.597 50.000 0.00 0.00 0.00 3.32
308 318 0.250727 CACAAATGGACTCGTGGGGT 60.251 55.000 0.00 0.00 0.00 4.95
333 343 2.107141 GACGGGCAAGAGGATCGG 59.893 66.667 0.00 0.00 42.67 4.18
363 373 1.672030 CGGTCCTGCATCACAAGCA 60.672 57.895 0.00 0.00 40.19 3.91
377 397 2.033675 CACAAGCAACAGATGTGAAGCA 59.966 45.455 12.16 0.00 45.61 3.91
407 427 0.687354 TCTCCAGGTCAACTTCCAGC 59.313 55.000 0.00 0.00 0.00 4.85
417 437 0.838987 AACTTCCAGCGGGGGTCTTA 60.839 55.000 2.05 0.00 37.22 2.10
441 461 3.239861 CACCAAGGAAGAGTGCCTC 57.760 57.895 0.00 0.00 33.76 4.70
487 507 3.706373 GAGGAGGTCCAGCGCCAA 61.706 66.667 2.29 0.00 38.89 4.52
490 510 2.268920 GAGGTCCAGCGCCAATGA 59.731 61.111 2.29 0.00 0.00 2.57
497 517 1.973281 CAGCGCCAATGAAGGGTGT 60.973 57.895 2.29 0.00 38.20 4.16
498 518 1.675641 AGCGCCAATGAAGGGTGTC 60.676 57.895 2.29 0.00 38.20 3.67
499 519 2.700773 GCGCCAATGAAGGGTGTCC 61.701 63.158 0.00 0.00 38.20 4.02
500 520 2.398554 CGCCAATGAAGGGTGTCCG 61.399 63.158 0.00 0.00 38.33 4.79
501 521 1.002624 GCCAATGAAGGGTGTCCGA 60.003 57.895 0.00 0.00 38.33 4.55
502 522 0.608035 GCCAATGAAGGGTGTCCGAA 60.608 55.000 0.00 0.00 38.33 4.30
503 523 1.453155 CCAATGAAGGGTGTCCGAAG 58.547 55.000 0.00 0.00 38.33 3.79
504 524 0.804989 CAATGAAGGGTGTCCGAAGC 59.195 55.000 0.00 0.00 38.33 3.86
505 525 0.400213 AATGAAGGGTGTCCGAAGCA 59.600 50.000 0.00 0.00 38.33 3.91
553 3028 3.134804 GGCACCAGAGGTCTATGTATTGT 59.865 47.826 0.00 0.00 31.02 2.71
639 3114 3.767230 CACGGTGCGAGTCTTGCG 61.767 66.667 7.59 0.00 34.24 4.85
693 3168 1.435515 CTAGCTCGGCCACTGACTC 59.564 63.158 2.24 0.00 0.00 3.36
791 3272 2.504367 CTACCAACAGGTCACCTTTGG 58.496 52.381 25.04 25.04 42.22 3.28
879 3360 1.447838 CCCGTCCACGTTCATCCAG 60.448 63.158 0.00 0.00 37.74 3.86
955 3445 1.005748 TGGCAGTCTCGCAGAACAG 60.006 57.895 0.00 0.00 34.09 3.16
956 3446 1.005630 GGCAGTCTCGCAGAACAGT 60.006 57.895 0.00 0.00 34.09 3.55
957 3447 1.011451 GGCAGTCTCGCAGAACAGTC 61.011 60.000 0.00 0.00 34.09 3.51
958 3448 0.319040 GCAGTCTCGCAGAACAGTCA 60.319 55.000 0.00 0.00 34.09 3.41
959 3449 1.695813 CAGTCTCGCAGAACAGTCAG 58.304 55.000 0.00 0.00 34.09 3.51
973 3463 1.827789 GTCAGCCACAGCCCAAACA 60.828 57.895 0.00 0.00 41.25 2.83
975 3465 0.403655 TCAGCCACAGCCCAAACATA 59.596 50.000 0.00 0.00 41.25 2.29
1146 3636 2.202492 CTCGACGAGTTCCTGGCG 60.202 66.667 16.83 0.00 0.00 5.69
1147 3637 2.670592 TCGACGAGTTCCTGGCGA 60.671 61.111 0.00 0.00 0.00 5.54
1427 3934 0.676466 TTCGCCCAACACCATAGCAG 60.676 55.000 0.00 0.00 0.00 4.24
1445 3952 7.009540 CCATAGCAGATTGAAAATTTCGAAACC 59.990 37.037 13.81 3.79 0.00 3.27
1478 3991 6.615264 AAAGCTTGATATGATACTGCACTG 57.385 37.500 0.00 0.00 0.00 3.66
1508 4021 3.011014 TGGCAAACCACTCCACCA 58.989 55.556 0.00 0.00 42.67 4.17
1511 4024 1.047801 GGCAAACCACTCCACCAATT 58.952 50.000 0.00 0.00 35.26 2.32
1512 4025 2.243810 GGCAAACCACTCCACCAATTA 58.756 47.619 0.00 0.00 35.26 1.40
1514 4027 3.119137 GGCAAACCACTCCACCAATTATC 60.119 47.826 0.00 0.00 35.26 1.75
1589 4110 6.721318 AGAAACCCTGAATTGCAAGATACTA 58.279 36.000 4.94 0.00 0.00 1.82
1596 4117 6.201806 CCTGAATTGCAAGATACTAGCACTAC 59.798 42.308 4.94 0.00 38.11 2.73
1598 4119 6.758416 TGAATTGCAAGATACTAGCACTACAG 59.242 38.462 4.94 0.00 38.11 2.74
1796 4317 2.093973 AGTGCTGAGCCACTATGTGTAC 60.094 50.000 0.23 0.00 43.86 2.90
1836 4357 4.584743 ACTTCCCTGAATTTGTGGAGAAAC 59.415 41.667 0.00 0.00 0.00 2.78
1987 4510 6.183360 GGCTTCTTGTTCCTTTAAAACAGAGT 60.183 38.462 0.00 0.00 37.86 3.24
1990 4513 9.937175 CTTCTTGTTCCTTTAAAACAGAGTTAG 57.063 33.333 0.00 0.00 37.86 2.34
2009 4646 9.988815 AGAGTTAGTATATTATTGGCTCTGTTG 57.011 33.333 0.00 0.00 30.71 3.33
2219 4899 8.951541 AGGTGTATCTAGAATTCTACTACCTCT 58.048 37.037 11.24 11.58 0.00 3.69
2225 4905 8.098963 TCTAGAATTCTACTACCTCTGTACCA 57.901 38.462 11.24 0.00 0.00 3.25
2240 4920 9.975218 ACCTCTGTACCAAAATATAAGATGTTT 57.025 29.630 0.00 0.00 0.00 2.83
2284 5009 9.005777 AGCCTACAAAAACGTCTTATATTTTGA 57.994 29.630 21.46 9.08 42.48 2.69
2285 5010 9.783256 GCCTACAAAAACGTCTTATATTTTGAT 57.217 29.630 21.46 11.72 42.48 2.57
2298 5023 9.370930 TCTTATATTTTGATACGGAGGGAGTAA 57.629 33.333 0.00 0.00 0.00 2.24
2303 5028 8.672823 ATTTTGATACGGAGGGAGTAATAAAC 57.327 34.615 0.00 0.00 0.00 2.01
2304 5029 7.427989 TTTGATACGGAGGGAGTAATAAACT 57.572 36.000 0.00 0.00 42.80 2.66
2305 5030 7.427989 TTGATACGGAGGGAGTAATAAACTT 57.572 36.000 0.00 0.00 39.07 2.66
2306 5031 7.427989 TGATACGGAGGGAGTAATAAACTTT 57.572 36.000 0.00 0.00 39.07 2.66
2307 5032 7.854337 TGATACGGAGGGAGTAATAAACTTTT 58.146 34.615 0.00 0.00 39.07 2.27
2308 5033 8.323567 TGATACGGAGGGAGTAATAAACTTTTT 58.676 33.333 0.00 0.00 39.07 1.94
2309 5034 6.812879 ACGGAGGGAGTAATAAACTTTTTG 57.187 37.500 0.00 0.00 39.07 2.44
2310 5035 6.536447 ACGGAGGGAGTAATAAACTTTTTGA 58.464 36.000 0.00 0.00 39.07 2.69
2311 5036 6.429078 ACGGAGGGAGTAATAAACTTTTTGAC 59.571 38.462 0.00 0.00 39.07 3.18
2312 5037 6.428771 CGGAGGGAGTAATAAACTTTTTGACA 59.571 38.462 0.00 0.00 39.07 3.58
2313 5038 7.040961 CGGAGGGAGTAATAAACTTTTTGACAA 60.041 37.037 0.00 0.00 39.07 3.18
2314 5039 8.635328 GGAGGGAGTAATAAACTTTTTGACAAA 58.365 33.333 0.00 0.00 39.07 2.83
2317 5042 9.974980 GGGAGTAATAAACTTTTTGACAAATCA 57.025 29.630 0.50 0.00 39.07 2.57
2320 5045 8.964150 AGTAATAAACTTTTTGACAAATCACGC 58.036 29.630 0.50 0.00 33.35 5.34
2321 5046 8.964150 GTAATAAACTTTTTGACAAATCACGCT 58.036 29.630 0.50 0.00 33.38 5.07
2322 5047 5.949233 AAACTTTTTGACAAATCACGCTC 57.051 34.783 0.50 0.00 33.38 5.03
2323 5048 4.630894 ACTTTTTGACAAATCACGCTCA 57.369 36.364 0.50 0.00 33.38 4.26
2324 5049 5.186996 ACTTTTTGACAAATCACGCTCAT 57.813 34.783 0.50 0.00 33.38 2.90
2325 5050 4.977963 ACTTTTTGACAAATCACGCTCATG 59.022 37.500 0.50 0.00 33.38 3.07
2326 5051 4.827304 TTTTGACAAATCACGCTCATGA 57.173 36.364 0.50 0.00 33.38 3.07
2327 5052 4.827304 TTTGACAAATCACGCTCATGAA 57.173 36.364 0.00 0.00 33.38 2.57
2328 5053 4.827304 TTGACAAATCACGCTCATGAAA 57.173 36.364 0.00 0.00 33.38 2.69
2329 5054 4.827304 TGACAAATCACGCTCATGAAAA 57.173 36.364 0.00 0.00 30.82 2.29
2330 5055 5.375417 TGACAAATCACGCTCATGAAAAT 57.625 34.783 0.00 0.00 30.82 1.82
2331 5056 5.155643 TGACAAATCACGCTCATGAAAATG 58.844 37.500 0.00 0.00 30.82 2.32
2332 5057 3.922240 ACAAATCACGCTCATGAAAATGC 59.078 39.130 0.00 0.00 30.82 3.56
2333 5058 3.853831 AATCACGCTCATGAAAATGCA 57.146 38.095 0.00 0.00 30.82 3.96
2334 5059 3.853831 ATCACGCTCATGAAAATGCAA 57.146 38.095 0.00 0.00 30.82 4.08
2335 5060 3.853831 TCACGCTCATGAAAATGCAAT 57.146 38.095 0.00 0.00 0.00 3.56
2336 5061 4.961435 TCACGCTCATGAAAATGCAATA 57.039 36.364 0.00 0.00 0.00 1.90
2337 5062 4.661125 TCACGCTCATGAAAATGCAATAC 58.339 39.130 0.00 0.00 0.00 1.89
2338 5063 4.155644 TCACGCTCATGAAAATGCAATACA 59.844 37.500 0.00 0.00 0.00 2.29
2339 5064 4.263677 CACGCTCATGAAAATGCAATACAC 59.736 41.667 0.00 0.00 0.00 2.90
2340 5065 3.792956 CGCTCATGAAAATGCAATACACC 59.207 43.478 0.00 0.00 0.00 4.16
2341 5066 4.439153 CGCTCATGAAAATGCAATACACCT 60.439 41.667 0.00 0.00 0.00 4.00
2342 5067 4.802039 GCTCATGAAAATGCAATACACCTG 59.198 41.667 0.00 0.00 0.00 4.00
2343 5068 5.393352 GCTCATGAAAATGCAATACACCTGA 60.393 40.000 0.00 0.00 0.00 3.86
2344 5069 6.587206 TCATGAAAATGCAATACACCTGAA 57.413 33.333 0.00 0.00 0.00 3.02
2345 5070 6.990798 TCATGAAAATGCAATACACCTGAAA 58.009 32.000 0.00 0.00 0.00 2.69
2346 5071 7.092079 TCATGAAAATGCAATACACCTGAAAG 58.908 34.615 0.00 0.00 0.00 2.62
2361 5086 2.972625 TGAAAGGCAGATTCTACCACG 58.027 47.619 5.72 0.00 0.00 4.94
2362 5087 2.280628 GAAAGGCAGATTCTACCACGG 58.719 52.381 5.72 0.00 0.00 4.94
2363 5088 1.568504 AAGGCAGATTCTACCACGGA 58.431 50.000 5.72 0.00 0.00 4.69
2364 5089 1.568504 AGGCAGATTCTACCACGGAA 58.431 50.000 5.72 0.00 0.00 4.30
2365 5090 1.482593 AGGCAGATTCTACCACGGAAG 59.517 52.381 5.72 0.00 0.00 3.46
2378 5103 1.742761 ACGGAAGTCCATGAATGCTG 58.257 50.000 0.00 0.00 44.19 4.41
2379 5104 1.019673 CGGAAGTCCATGAATGCTGG 58.980 55.000 0.00 0.00 35.14 4.85
2380 5105 0.743097 GGAAGTCCATGAATGCTGGC 59.257 55.000 0.00 0.00 33.56 4.85
2381 5106 1.466856 GAAGTCCATGAATGCTGGCA 58.533 50.000 0.00 0.00 33.56 4.92
2382 5107 1.820519 GAAGTCCATGAATGCTGGCAA 59.179 47.619 0.00 0.00 33.56 4.52
2383 5108 1.927487 AGTCCATGAATGCTGGCAAA 58.073 45.000 0.00 0.00 33.56 3.68
2384 5109 2.463752 AGTCCATGAATGCTGGCAAAT 58.536 42.857 0.00 0.00 33.56 2.32
2385 5110 3.634504 AGTCCATGAATGCTGGCAAATA 58.365 40.909 0.00 0.00 33.56 1.40
2386 5111 3.635373 AGTCCATGAATGCTGGCAAATAG 59.365 43.478 0.00 0.00 33.56 1.73
2387 5112 3.633525 GTCCATGAATGCTGGCAAATAGA 59.366 43.478 0.00 0.00 33.56 1.98
2388 5113 4.098349 GTCCATGAATGCTGGCAAATAGAA 59.902 41.667 0.00 0.00 33.56 2.10
2389 5114 4.897076 TCCATGAATGCTGGCAAATAGAAT 59.103 37.500 0.00 0.00 33.56 2.40
2390 5115 5.364446 TCCATGAATGCTGGCAAATAGAATT 59.636 36.000 0.00 0.00 33.56 2.17
2391 5116 5.465390 CCATGAATGCTGGCAAATAGAATTG 59.535 40.000 0.00 0.00 0.00 2.32
2392 5117 5.918426 TGAATGCTGGCAAATAGAATTGA 57.082 34.783 0.00 0.00 31.84 2.57
2393 5118 6.474140 TGAATGCTGGCAAATAGAATTGAT 57.526 33.333 0.00 0.00 31.84 2.57
2394 5119 7.585579 TGAATGCTGGCAAATAGAATTGATA 57.414 32.000 0.00 0.00 31.84 2.15
2395 5120 8.009622 TGAATGCTGGCAAATAGAATTGATAA 57.990 30.769 0.00 0.00 31.84 1.75
2396 5121 7.922278 TGAATGCTGGCAAATAGAATTGATAAC 59.078 33.333 0.00 0.00 31.84 1.89
2397 5122 6.147864 TGCTGGCAAATAGAATTGATAACC 57.852 37.500 0.00 0.00 31.84 2.85
2398 5123 5.893255 TGCTGGCAAATAGAATTGATAACCT 59.107 36.000 0.00 0.00 31.84 3.50
2399 5124 6.380846 TGCTGGCAAATAGAATTGATAACCTT 59.619 34.615 0.00 0.00 31.84 3.50
2400 5125 6.920210 GCTGGCAAATAGAATTGATAACCTTC 59.080 38.462 0.00 0.00 31.84 3.46
2401 5126 7.026631 TGGCAAATAGAATTGATAACCTTCG 57.973 36.000 0.00 0.00 31.84 3.79
2402 5127 6.601613 TGGCAAATAGAATTGATAACCTTCGT 59.398 34.615 0.00 0.00 31.84 3.85
2403 5128 7.771361 TGGCAAATAGAATTGATAACCTTCGTA 59.229 33.333 0.00 0.00 31.84 3.43
2404 5129 8.784043 GGCAAATAGAATTGATAACCTTCGTAT 58.216 33.333 0.00 0.00 31.84 3.06
2405 5130 9.599322 GCAAATAGAATTGATAACCTTCGTATG 57.401 33.333 0.00 0.00 31.84 2.39
2407 5132 9.847224 AAATAGAATTGATAACCTTCGTATGGT 57.153 29.630 0.00 0.00 39.91 3.55
2408 5133 8.833231 ATAGAATTGATAACCTTCGTATGGTG 57.167 34.615 0.00 0.00 37.93 4.17
2409 5134 6.884832 AGAATTGATAACCTTCGTATGGTGA 58.115 36.000 0.00 0.00 37.93 4.02
2410 5135 6.761714 AGAATTGATAACCTTCGTATGGTGAC 59.238 38.462 0.00 0.00 37.93 3.67
2411 5136 4.036567 TGATAACCTTCGTATGGTGACG 57.963 45.455 0.00 0.00 44.29 4.35
2412 5137 2.282701 TAACCTTCGTATGGTGACGC 57.717 50.000 0.00 0.00 42.62 5.19
2413 5138 0.319083 AACCTTCGTATGGTGACGCA 59.681 50.000 0.00 0.00 42.62 5.24
2414 5139 0.319083 ACCTTCGTATGGTGACGCAA 59.681 50.000 0.00 0.00 42.62 4.85
2415 5140 0.999406 CCTTCGTATGGTGACGCAAG 59.001 55.000 0.00 0.00 42.62 4.01
2416 5141 5.669030 AACCTTCGTATGGTGACGCAAGT 62.669 47.826 0.00 0.00 46.73 3.16
2433 5158 6.660486 CGCAAGTCTTGTTACAAAATCTTC 57.340 37.500 14.03 0.00 0.00 2.87
2434 5159 6.198687 CGCAAGTCTTGTTACAAAATCTTCA 58.801 36.000 14.03 0.00 0.00 3.02
2435 5160 6.857964 CGCAAGTCTTGTTACAAAATCTTCAT 59.142 34.615 14.03 0.00 0.00 2.57
2436 5161 8.015087 CGCAAGTCTTGTTACAAAATCTTCATA 58.985 33.333 14.03 0.00 0.00 2.15
2437 5162 9.677567 GCAAGTCTTGTTACAAAATCTTCATAA 57.322 29.630 14.03 0.00 0.00 1.90
2443 5168 9.774742 CTTGTTACAAAATCTTCATAACTAGCC 57.225 33.333 0.00 0.00 0.00 3.93
2444 5169 9.515226 TTGTTACAAAATCTTCATAACTAGCCT 57.485 29.630 0.00 0.00 0.00 4.58
2445 5170 8.946085 TGTTACAAAATCTTCATAACTAGCCTG 58.054 33.333 0.00 0.00 0.00 4.85
2446 5171 6.442513 ACAAAATCTTCATAACTAGCCTGC 57.557 37.500 0.00 0.00 0.00 4.85
2447 5172 6.183347 ACAAAATCTTCATAACTAGCCTGCT 58.817 36.000 0.00 0.00 0.00 4.24
2448 5173 6.094603 ACAAAATCTTCATAACTAGCCTGCTG 59.905 38.462 0.97 0.00 0.00 4.41
2449 5174 3.185246 TCTTCATAACTAGCCTGCTGC 57.815 47.619 0.97 0.00 41.71 5.25
2450 5175 2.501316 TCTTCATAACTAGCCTGCTGCA 59.499 45.455 0.88 0.88 44.83 4.41
2451 5176 2.315925 TCATAACTAGCCTGCTGCAC 57.684 50.000 0.00 0.00 44.83 4.57
2452 5177 1.134401 TCATAACTAGCCTGCTGCACC 60.134 52.381 0.00 0.00 44.83 5.01
2453 5178 1.134280 CATAACTAGCCTGCTGCACCT 60.134 52.381 0.00 0.40 44.83 4.00
2454 5179 0.250234 TAACTAGCCTGCTGCACCTG 59.750 55.000 0.00 0.00 44.83 4.00
2455 5180 1.772819 AACTAGCCTGCTGCACCTGT 61.773 55.000 0.00 0.00 44.83 4.00
2456 5181 1.002868 CTAGCCTGCTGCACCTGTT 60.003 57.895 0.00 0.00 44.83 3.16
2457 5182 0.607489 CTAGCCTGCTGCACCTGTTT 60.607 55.000 0.00 0.00 44.83 2.83
2458 5183 0.178992 TAGCCTGCTGCACCTGTTTT 60.179 50.000 0.00 0.00 44.83 2.43
2459 5184 0.178992 AGCCTGCTGCACCTGTTTTA 60.179 50.000 0.00 0.00 44.83 1.52
2460 5185 0.673437 GCCTGCTGCACCTGTTTTAA 59.327 50.000 0.00 0.00 40.77 1.52
2461 5186 1.273327 GCCTGCTGCACCTGTTTTAAT 59.727 47.619 0.00 0.00 40.77 1.40
2462 5187 2.672195 GCCTGCTGCACCTGTTTTAATC 60.672 50.000 0.00 0.00 40.77 1.75
2463 5188 2.557924 CCTGCTGCACCTGTTTTAATCA 59.442 45.455 0.00 0.00 0.00 2.57
2464 5189 3.194116 CCTGCTGCACCTGTTTTAATCAT 59.806 43.478 0.00 0.00 0.00 2.45
2465 5190 4.171005 CTGCTGCACCTGTTTTAATCATG 58.829 43.478 0.00 0.00 0.00 3.07
2466 5191 2.925563 GCTGCACCTGTTTTAATCATGC 59.074 45.455 0.00 0.00 0.00 4.06
2467 5192 3.614630 GCTGCACCTGTTTTAATCATGCA 60.615 43.478 0.00 0.00 39.16 3.96
2468 5193 4.751060 CTGCACCTGTTTTAATCATGCAT 58.249 39.130 0.00 0.00 40.52 3.96
2469 5194 4.496360 TGCACCTGTTTTAATCATGCATG 58.504 39.130 21.07 21.07 36.72 4.06
2470 5195 3.866910 GCACCTGTTTTAATCATGCATGG 59.133 43.478 25.97 8.74 0.00 3.66
2471 5196 3.866910 CACCTGTTTTAATCATGCATGGC 59.133 43.478 25.97 8.69 0.00 4.40
2472 5197 3.770933 ACCTGTTTTAATCATGCATGGCT 59.229 39.130 25.97 15.49 0.00 4.75
2473 5198 4.223477 ACCTGTTTTAATCATGCATGGCTT 59.777 37.500 25.97 20.34 0.00 4.35
2490 5215 6.676456 GCATGGCTTTGTCTTAGTTACATCTG 60.676 42.308 0.00 0.00 0.00 2.90
2494 5219 7.039293 TGGCTTTGTCTTAGTTACATCTGTAGA 60.039 37.037 0.00 0.00 0.00 2.59
2508 5233 4.873746 TCTGTAGAGCAGTACAAGCTTT 57.126 40.909 13.18 10.53 43.58 3.51
2509 5234 5.977489 TCTGTAGAGCAGTACAAGCTTTA 57.023 39.130 13.18 9.65 43.58 1.85
2522 5247 8.268738 CAGTACAAGCTTTAAACATTTTTCTGC 58.731 33.333 0.00 0.00 0.00 4.26
2528 5253 8.171164 AGCTTTAAACATTTTTCTGCTACTCT 57.829 30.769 0.00 0.00 0.00 3.24
2538 5263 3.827008 TCTGCTACTCTAATGGCCTTG 57.173 47.619 3.32 0.00 0.00 3.61
2543 5287 5.509498 TGCTACTCTAATGGCCTTGATTTT 58.491 37.500 3.32 0.00 0.00 1.82
2737 5587 1.105457 TAGCCCATTCACAATGCTGC 58.895 50.000 0.00 0.00 37.57 5.25
2739 5589 0.459585 GCCCATTCACAATGCTGCTG 60.460 55.000 0.00 0.00 37.57 4.41
2750 5600 3.243301 ACAATGCTGCTGACTGAACTTTG 60.243 43.478 0.00 0.00 0.00 2.77
2762 5612 1.239347 GAACTTTGACCCTGCTGTCC 58.761 55.000 0.00 0.00 34.25 4.02
2807 5657 0.036388 GAAGCTGGAATGGACCGACA 60.036 55.000 0.00 0.00 0.00 4.35
2920 5770 3.239253 ACGGGTTGGAAGGACGCT 61.239 61.111 0.00 0.00 0.00 5.07
2992 5842 2.072298 GCCGATGTCATAGAGGAATGC 58.928 52.381 5.84 0.00 0.00 3.56
3067 5917 0.684535 TTCTCATCGACAACTGGGCA 59.315 50.000 0.00 0.00 0.00 5.36
3146 5996 9.325198 TCTGTAAATAGCATGTAAATGTTCGAT 57.675 29.630 0.00 0.00 0.00 3.59
3147 5997 9.586150 CTGTAAATAGCATGTAAATGTTCGATC 57.414 33.333 0.00 0.00 0.00 3.69
3148 5998 8.556194 TGTAAATAGCATGTAAATGTTCGATCC 58.444 33.333 0.00 0.00 0.00 3.36
3149 5999 6.560253 AATAGCATGTAAATGTTCGATCCC 57.440 37.500 0.00 0.00 0.00 3.85
3150 6000 3.214328 AGCATGTAAATGTTCGATCCCC 58.786 45.455 0.00 0.00 0.00 4.81
3151 6001 2.032030 GCATGTAAATGTTCGATCCCCG 60.032 50.000 0.00 0.00 40.25 5.73
3152 6002 1.658994 TGTAAATGTTCGATCCCCGC 58.341 50.000 0.00 0.00 38.37 6.13
3153 6003 1.066071 TGTAAATGTTCGATCCCCGCA 60.066 47.619 0.00 0.00 38.37 5.69
3154 6004 2.011222 GTAAATGTTCGATCCCCGCAA 58.989 47.619 0.00 0.00 38.37 4.85
3155 6005 1.540267 AAATGTTCGATCCCCGCAAA 58.460 45.000 0.00 0.00 38.37 3.68
3156 6006 1.540267 AATGTTCGATCCCCGCAAAA 58.460 45.000 0.00 0.00 38.37 2.44
3157 6007 1.540267 ATGTTCGATCCCCGCAAAAA 58.460 45.000 0.00 0.00 38.37 1.94
3158 6008 0.594110 TGTTCGATCCCCGCAAAAAC 59.406 50.000 0.00 0.00 38.37 2.43
3159 6009 0.594110 GTTCGATCCCCGCAAAAACA 59.406 50.000 0.00 0.00 38.37 2.83
3160 6010 1.001158 GTTCGATCCCCGCAAAAACAA 60.001 47.619 0.00 0.00 38.37 2.83
3161 6011 1.319541 TCGATCCCCGCAAAAACAAA 58.680 45.000 0.00 0.00 38.37 2.83
3162 6012 1.681793 TCGATCCCCGCAAAAACAAAA 59.318 42.857 0.00 0.00 38.37 2.44
3163 6013 2.058057 CGATCCCCGCAAAAACAAAAG 58.942 47.619 0.00 0.00 0.00 2.27
3164 6014 1.798223 GATCCCCGCAAAAACAAAAGC 59.202 47.619 0.00 0.00 0.00 3.51
3165 6015 0.537188 TCCCCGCAAAAACAAAAGCA 59.463 45.000 0.00 0.00 0.00 3.91
3166 6016 1.139853 TCCCCGCAAAAACAAAAGCAT 59.860 42.857 0.00 0.00 0.00 3.79
3167 6017 1.263752 CCCCGCAAAAACAAAAGCATG 59.736 47.619 0.00 0.00 0.00 4.06
3168 6018 1.939255 CCCGCAAAAACAAAAGCATGT 59.061 42.857 0.00 0.00 34.24 3.21
3169 6019 3.126831 CCCGCAAAAACAAAAGCATGTA 58.873 40.909 0.00 0.00 32.02 2.29
3170 6020 3.557595 CCCGCAAAAACAAAAGCATGTAA 59.442 39.130 0.00 0.00 32.02 2.41
3171 6021 4.034510 CCCGCAAAAACAAAAGCATGTAAA 59.965 37.500 0.00 0.00 32.02 2.01
3172 6022 5.277731 CCCGCAAAAACAAAAGCATGTAAAT 60.278 36.000 0.00 0.00 32.02 1.40
3173 6023 5.620417 CCGCAAAAACAAAAGCATGTAAATG 59.380 36.000 0.00 0.00 32.02 2.32
3174 6024 6.190962 CGCAAAAACAAAAGCATGTAAATGT 58.809 32.000 0.00 0.00 32.02 2.71
3175 6025 6.686253 CGCAAAAACAAAAGCATGTAAATGTT 59.314 30.769 0.00 0.00 32.02 2.71
3176 6026 7.097490 CGCAAAAACAAAAGCATGTAAATGTTC 60.097 33.333 8.72 0.00 32.02 3.18
3177 6027 7.097490 GCAAAAACAAAAGCATGTAAATGTTCG 60.097 33.333 8.72 4.23 32.02 3.95
3178 6028 7.763172 AAAACAAAAGCATGTAAATGTTCGA 57.237 28.000 8.72 0.00 32.02 3.71
3206 6056 0.811616 ACGATGCTTTGCTCGGGATC 60.812 55.000 12.86 0.00 39.16 3.36
3345 6195 4.941263 TGCAACCTGTAACATATGAAGTCC 59.059 41.667 10.38 0.00 0.00 3.85
3411 6261 0.670162 ACAGCAACATGTGGCACTTC 59.330 50.000 26.79 0.00 30.46 3.01
3412 6262 0.386352 CAGCAACATGTGGCACTTCG 60.386 55.000 26.79 9.41 0.00 3.79
3413 6263 0.819259 AGCAACATGTGGCACTTCGT 60.819 50.000 26.79 10.07 0.00 3.85
3449 6299 9.796180 AATTTTACAACATGTACTAAGTACCCA 57.204 29.630 0.00 0.00 38.14 4.51
3458 6308 1.270550 ACTAAGTACCCACACGTTCCG 59.729 52.381 0.00 0.00 0.00 4.30
3465 6315 2.651361 CACACGTTCCGGCTCTCT 59.349 61.111 0.00 0.00 0.00 3.10
3475 6325 3.780173 GGCTCTCTCCGGCAGCTT 61.780 66.667 0.00 0.00 33.38 3.74
3537 6387 2.185608 GAGACTTCAGAGGCGGCC 59.814 66.667 12.11 12.11 35.43 6.13
3538 6388 2.604686 AGACTTCAGAGGCGGCCA 60.605 61.111 23.09 0.00 35.43 5.36
3552 6402 2.709475 GCCACGAATCACGCCATC 59.291 61.111 0.00 0.00 46.94 3.51
3555 6405 2.890474 ACGAATCACGCCATCGCC 60.890 61.111 0.00 0.00 46.94 5.54
3556 6406 3.640000 CGAATCACGCCATCGCCC 61.640 66.667 0.00 0.00 39.84 6.13
3558 6408 1.819632 GAATCACGCCATCGCCCTT 60.820 57.895 0.00 0.00 39.84 3.95
3559 6409 1.776034 GAATCACGCCATCGCCCTTC 61.776 60.000 0.00 0.00 39.84 3.46
3560 6410 4.812476 TCACGCCATCGCCCTTCG 62.812 66.667 0.00 0.00 39.84 3.79
3562 6412 4.388499 ACGCCATCGCCCTTCGTT 62.388 61.111 0.00 0.00 39.84 3.85
3564 6414 3.202706 GCCATCGCCCTTCGTTCC 61.203 66.667 0.00 0.00 39.67 3.62
3565 6415 2.267642 CCATCGCCCTTCGTTCCA 59.732 61.111 0.00 0.00 39.67 3.53
3566 6416 1.153168 CCATCGCCCTTCGTTCCAT 60.153 57.895 0.00 0.00 39.67 3.41
3568 6418 0.744414 CATCGCCCTTCGTTCCATGT 60.744 55.000 0.00 0.00 39.67 3.21
3569 6419 0.035439 ATCGCCCTTCGTTCCATGTT 60.035 50.000 0.00 0.00 39.67 2.71
3571 6421 1.002201 TCGCCCTTCGTTCCATGTTAA 59.998 47.619 0.00 0.00 39.67 2.01
3572 6422 2.014128 CGCCCTTCGTTCCATGTTAAT 58.986 47.619 0.00 0.00 0.00 1.40
3573 6423 2.422127 CGCCCTTCGTTCCATGTTAATT 59.578 45.455 0.00 0.00 0.00 1.40
3574 6424 3.730662 CGCCCTTCGTTCCATGTTAATTG 60.731 47.826 0.00 0.00 0.00 2.32
3575 6425 3.192633 GCCCTTCGTTCCATGTTAATTGT 59.807 43.478 0.00 0.00 0.00 2.71
3576 6426 4.674362 GCCCTTCGTTCCATGTTAATTGTC 60.674 45.833 0.00 0.00 0.00 3.18
3577 6427 4.457603 CCCTTCGTTCCATGTTAATTGTCA 59.542 41.667 0.00 0.00 0.00 3.58
3578 6428 5.390613 CCTTCGTTCCATGTTAATTGTCAC 58.609 41.667 0.00 0.00 0.00 3.67
3579 6429 5.181245 CCTTCGTTCCATGTTAATTGTCACT 59.819 40.000 0.00 0.00 0.00 3.41
3580 6430 5.605564 TCGTTCCATGTTAATTGTCACTG 57.394 39.130 0.00 0.00 0.00 3.66
3581 6431 5.301555 TCGTTCCATGTTAATTGTCACTGA 58.698 37.500 0.00 0.00 0.00 3.41
3582 6432 5.937540 TCGTTCCATGTTAATTGTCACTGAT 59.062 36.000 0.00 0.00 0.00 2.90
3584 6434 7.040755 TCGTTCCATGTTAATTGTCACTGATTT 60.041 33.333 0.00 0.00 0.00 2.17
3585 6435 8.233868 CGTTCCATGTTAATTGTCACTGATTTA 58.766 33.333 0.00 0.00 0.00 1.40
3586 6436 9.559958 GTTCCATGTTAATTGTCACTGATTTAG 57.440 33.333 0.00 0.00 0.00 1.85
3587 6437 8.862325 TCCATGTTAATTGTCACTGATTTAGT 57.138 30.769 0.00 0.00 41.36 2.24
3589 6439 9.559958 CCATGTTAATTGTCACTGATTTAGTTC 57.440 33.333 0.00 0.00 37.60 3.01
3596 6446 9.520204 AATTGTCACTGATTTAGTTCAAAGTTG 57.480 29.630 0.00 0.00 37.60 3.16
3597 6447 7.624360 TGTCACTGATTTAGTTCAAAGTTGT 57.376 32.000 0.00 0.00 37.60 3.32
3598 6448 8.725405 TGTCACTGATTTAGTTCAAAGTTGTA 57.275 30.769 0.00 0.00 37.60 2.41
3599 6449 8.609176 TGTCACTGATTTAGTTCAAAGTTGTAC 58.391 33.333 0.00 0.00 37.60 2.90
3600 6450 8.827677 GTCACTGATTTAGTTCAAAGTTGTACT 58.172 33.333 8.18 8.18 40.98 2.73
3608 6458 6.061231 AGTTCAAAGTTGTACTAAAGCAGC 57.939 37.500 1.89 0.00 37.09 5.25
3609 6459 4.725556 TCAAAGTTGTACTAAAGCAGCG 57.274 40.909 0.00 0.00 0.00 5.18
3610 6460 4.373527 TCAAAGTTGTACTAAAGCAGCGA 58.626 39.130 0.00 0.00 0.00 4.93
3611 6461 4.210537 TCAAAGTTGTACTAAAGCAGCGAC 59.789 41.667 0.00 0.00 0.00 5.19
3612 6462 3.380479 AGTTGTACTAAAGCAGCGACA 57.620 42.857 0.00 0.00 0.00 4.35
3613 6463 3.318017 AGTTGTACTAAAGCAGCGACAG 58.682 45.455 0.00 0.00 0.00 3.51
3614 6464 3.057734 GTTGTACTAAAGCAGCGACAGT 58.942 45.455 0.00 2.08 0.00 3.55
3615 6465 3.380479 TGTACTAAAGCAGCGACAGTT 57.620 42.857 0.00 0.00 0.00 3.16
3616 6466 4.508461 TGTACTAAAGCAGCGACAGTTA 57.492 40.909 0.00 0.00 0.00 2.24
3617 6467 4.873817 TGTACTAAAGCAGCGACAGTTAA 58.126 39.130 0.00 0.00 0.00 2.01
3618 6468 5.475719 TGTACTAAAGCAGCGACAGTTAAT 58.524 37.500 0.00 0.00 0.00 1.40
3619 6469 6.623486 TGTACTAAAGCAGCGACAGTTAATA 58.377 36.000 0.00 0.00 0.00 0.98
3620 6470 7.262772 TGTACTAAAGCAGCGACAGTTAATAT 58.737 34.615 0.00 0.00 0.00 1.28
3621 6471 6.589830 ACTAAAGCAGCGACAGTTAATATG 57.410 37.500 0.00 0.00 0.00 1.78
3622 6472 6.338146 ACTAAAGCAGCGACAGTTAATATGA 58.662 36.000 0.00 0.00 0.00 2.15
3623 6473 6.816640 ACTAAAGCAGCGACAGTTAATATGAA 59.183 34.615 0.00 0.00 0.00 2.57
3624 6474 6.683974 AAAGCAGCGACAGTTAATATGAAT 57.316 33.333 0.00 0.00 0.00 2.57
3625 6475 5.914085 AGCAGCGACAGTTAATATGAATC 57.086 39.130 0.00 0.00 0.00 2.52
3626 6476 5.359756 AGCAGCGACAGTTAATATGAATCA 58.640 37.500 0.00 0.00 0.00 2.57
3627 6477 5.464722 AGCAGCGACAGTTAATATGAATCAG 59.535 40.000 0.00 0.00 0.00 2.90
3628 6478 5.463392 GCAGCGACAGTTAATATGAATCAGA 59.537 40.000 0.00 0.00 0.00 3.27
3629 6479 6.346439 GCAGCGACAGTTAATATGAATCAGAG 60.346 42.308 0.00 0.00 0.00 3.35
3630 6480 6.145209 CAGCGACAGTTAATATGAATCAGAGG 59.855 42.308 0.00 0.00 0.00 3.69
3631 6481 5.406780 GCGACAGTTAATATGAATCAGAGGG 59.593 44.000 0.00 0.00 0.00 4.30
3632 6482 6.516718 CGACAGTTAATATGAATCAGAGGGT 58.483 40.000 0.00 0.00 0.00 4.34
3633 6483 6.422100 CGACAGTTAATATGAATCAGAGGGTG 59.578 42.308 0.00 0.00 0.00 4.61
3634 6484 7.200434 ACAGTTAATATGAATCAGAGGGTGT 57.800 36.000 0.00 0.00 0.00 4.16
3635 6485 8.319057 ACAGTTAATATGAATCAGAGGGTGTA 57.681 34.615 0.00 0.00 0.00 2.90
3636 6486 8.204836 ACAGTTAATATGAATCAGAGGGTGTAC 58.795 37.037 0.00 0.00 0.00 2.90
3637 6487 8.204160 CAGTTAATATGAATCAGAGGGTGTACA 58.796 37.037 0.00 0.00 0.00 2.90
3638 6488 8.938883 AGTTAATATGAATCAGAGGGTGTACAT 58.061 33.333 0.00 0.00 0.00 2.29
3662 6534 2.281139 TGCGGCGGTGAATCACAA 60.281 55.556 15.86 0.00 35.86 3.33
3671 6545 2.736081 CGGTGAATCACAATGGCAATGG 60.736 50.000 15.86 0.00 35.86 3.16
3718 6592 3.282831 AGGTCTTGCATGCGTTTTAAC 57.717 42.857 14.09 5.16 0.00 2.01
3720 6594 2.287909 GGTCTTGCATGCGTTTTAACCA 60.288 45.455 14.09 0.00 0.00 3.67
3786 6660 5.909621 ACAAATCAGCAATGCATAGACTT 57.090 34.783 8.35 0.00 0.00 3.01
3787 6661 5.647589 ACAAATCAGCAATGCATAGACTTG 58.352 37.500 8.35 10.95 0.00 3.16
3833 6707 6.039616 TGTGCAACAGGTTACTCAATTTTTC 58.960 36.000 0.00 0.00 45.67 2.29
3938 6813 7.480760 AATAGTTTGGATTGCTTACCACATT 57.519 32.000 0.00 0.00 35.81 2.71
3943 6818 3.253230 GGATTGCTTACCACATTTGCAC 58.747 45.455 0.00 0.00 33.13 4.57
3972 6847 2.799207 CGCCAAAGCTGAACATTTGTGT 60.799 45.455 0.00 0.00 35.16 3.72
4030 7548 9.088987 ACAAGTGAATAACTATTTCCAAACCAT 57.911 29.630 0.00 0.00 38.56 3.55
4115 7633 8.702438 CATCCAAGCAGTTTGTTTGTTTATTAG 58.298 33.333 5.21 0.00 36.94 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.370166 CCAGTCTCTCCAACATCTTTAAAGAC 59.630 42.308 19.94 3.93 37.98 3.01
6 7 4.982241 TTCCAGTCTCTCCAACATCTTT 57.018 40.909 0.00 0.00 0.00 2.52
8 9 4.382470 CGATTTCCAGTCTCTCCAACATCT 60.382 45.833 0.00 0.00 0.00 2.90
23 24 2.006888 GCGATTGACCTTCGATTTCCA 58.993 47.619 0.00 0.00 38.88 3.53
40 41 1.805539 CTTGCATCTTCGACGGCGA 60.806 57.895 10.67 10.67 46.33 5.54
66 67 1.269723 GCTTGGTGGCTTTGGAAGTAC 59.730 52.381 0.00 0.00 0.00 2.73
68 69 1.455383 CGCTTGGTGGCTTTGGAAGT 61.455 55.000 0.00 0.00 0.00 3.01
72 73 2.912025 ACCGCTTGGTGGCTTTGG 60.912 61.111 0.00 0.00 46.92 3.28
107 108 0.970937 TCCTACTCGCAAGGGACTGG 60.971 60.000 0.00 0.00 44.69 4.00
110 111 1.142097 GCTCCTACTCGCAAGGGAC 59.858 63.158 0.00 0.00 44.69 4.46
161 163 2.120232 CATAGCGACACGGCTTTCTAG 58.880 52.381 0.00 0.00 41.39 2.43
163 165 0.246635 ACATAGCGACACGGCTTTCT 59.753 50.000 0.00 0.00 41.39 2.52
164 166 0.370273 CACATAGCGACACGGCTTTC 59.630 55.000 0.00 0.00 41.39 2.62
174 176 0.464036 GATCACCCACCACATAGCGA 59.536 55.000 0.00 0.00 0.00 4.93
176 178 0.464036 TCGATCACCCACCACATAGC 59.536 55.000 0.00 0.00 0.00 2.97
217 227 3.594134 ACTCTTTCTCTCGGCAGATTTG 58.406 45.455 0.00 0.00 0.00 2.32
221 231 1.746220 GCTACTCTTTCTCTCGGCAGA 59.254 52.381 0.00 0.00 0.00 4.26
238 248 1.630369 ACAACATCTCTTGGCAGGCTA 59.370 47.619 0.00 0.00 0.00 3.93
258 268 4.589908 GACCAAGAAGAGGAAAAGCCATA 58.410 43.478 0.00 0.00 40.02 2.74
263 273 2.481952 CTGCGACCAAGAAGAGGAAAAG 59.518 50.000 0.00 0.00 0.00 2.27
327 337 4.899239 CTGCTGGACGGCCGATCC 62.899 72.222 35.90 31.55 36.79 3.36
357 367 2.292569 CTGCTTCACATCTGTTGCTTGT 59.707 45.455 0.00 0.00 0.00 3.16
363 373 1.242076 GGCACTGCTTCACATCTGTT 58.758 50.000 0.00 0.00 0.00 3.16
377 397 3.314331 CTGGAGACCGTGGGCACT 61.314 66.667 0.00 0.00 0.00 4.40
407 427 1.745489 GTGCTTGCTAAGACCCCCG 60.745 63.158 0.00 0.00 0.00 5.73
417 437 0.475906 ACTCTTCCTTGGTGCTTGCT 59.524 50.000 0.00 0.00 0.00 3.91
441 461 3.444703 ACTCGGCTAGTTCTTGCTATG 57.555 47.619 6.27 0.83 33.35 2.23
487 507 0.620556 ATGCTTCGGACACCCTTCAT 59.379 50.000 0.00 0.00 0.00 2.57
490 510 1.299976 GGATGCTTCGGACACCCTT 59.700 57.895 0.00 0.00 0.00 3.95
497 517 0.460284 GAGCTTTCGGATGCTTCGGA 60.460 55.000 5.44 5.85 39.91 4.55
498 518 1.432270 GGAGCTTTCGGATGCTTCGG 61.432 60.000 5.44 1.18 39.91 4.30
499 519 2.009888 GGAGCTTTCGGATGCTTCG 58.990 57.895 5.44 0.00 39.91 3.79
500 520 0.741221 ACGGAGCTTTCGGATGCTTC 60.741 55.000 5.44 2.37 39.91 3.86
501 521 1.021390 CACGGAGCTTTCGGATGCTT 61.021 55.000 5.44 0.00 39.91 3.91
502 522 1.448540 CACGGAGCTTTCGGATGCT 60.449 57.895 3.26 3.26 42.82 3.79
503 523 1.741770 ACACGGAGCTTTCGGATGC 60.742 57.895 13.55 0.00 0.00 3.91
504 524 1.361668 CCACACGGAGCTTTCGGATG 61.362 60.000 13.55 10.63 0.00 3.51
505 525 1.079127 CCACACGGAGCTTTCGGAT 60.079 57.895 13.55 0.51 0.00 4.18
581 3056 2.420129 GGTCGTGGGTGCAAGATATTCT 60.420 50.000 0.00 0.00 0.00 2.40
619 3094 2.661866 AAGACTCGCACCGTGCAC 60.662 61.111 22.89 6.82 45.36 4.57
693 3168 1.609783 GACCACTGGATTGAGGGGG 59.390 63.158 0.71 0.00 41.40 5.40
791 3272 2.139118 GTGTTCAGTGAAGCTGGAGAC 58.861 52.381 5.62 0.00 45.08 3.36
879 3360 0.884704 TTCAGGCTCAGCGTTTGGTC 60.885 55.000 0.00 0.00 0.00 4.02
955 3445 1.181098 ATGTTTGGGCTGTGGCTGAC 61.181 55.000 0.00 0.00 38.73 3.51
956 3446 0.403655 TATGTTTGGGCTGTGGCTGA 59.596 50.000 0.00 0.00 38.73 4.26
957 3447 0.527565 GTATGTTTGGGCTGTGGCTG 59.472 55.000 0.00 0.00 38.73 4.85
958 3448 0.960364 CGTATGTTTGGGCTGTGGCT 60.960 55.000 0.00 0.00 38.73 4.75
959 3449 1.506262 CGTATGTTTGGGCTGTGGC 59.494 57.895 0.00 0.00 37.82 5.01
973 3463 1.449601 CAGGGTTTGGCTCGCGTAT 60.450 57.895 5.77 0.00 0.00 3.06
1410 3906 0.464373 ATCTGCTATGGTGTTGGGCG 60.464 55.000 0.00 0.00 0.00 6.13
1457 3967 4.639334 CCAGTGCAGTATCATATCAAGCT 58.361 43.478 0.00 0.00 0.00 3.74
1478 3991 0.679002 TTTGCCATCAGCTCAGAGCC 60.679 55.000 19.40 2.93 43.77 4.70
1572 4093 6.758416 TGTAGTGCTAGTATCTTGCAATTCAG 59.242 38.462 0.00 0.00 42.83 3.02
1589 4110 5.778862 ACAACAAAACAAAACTGTAGTGCT 58.221 33.333 0.00 0.00 0.00 4.40
1596 4117 8.167985 CCTTAACATGACAACAAAACAAAACTG 58.832 33.333 0.00 0.00 0.00 3.16
1598 4119 8.245701 TCCTTAACATGACAACAAAACAAAAC 57.754 30.769 0.00 0.00 0.00 2.43
1836 4357 0.183014 ATCAGGCCATGCTTCTCCAG 59.817 55.000 5.01 0.00 0.00 3.86
1987 4510 9.764363 CTGACAACAGAGCCAATAATATACTAA 57.236 33.333 0.00 0.00 46.03 2.24
1990 4513 8.438676 AACTGACAACAGAGCCAATAATATAC 57.561 34.615 0.00 0.00 46.03 1.47
2009 4646 5.332808 GCAAATGCAAATGTTCAGAACTGAC 60.333 40.000 14.51 2.68 39.12 3.51
2170 4815 7.548075 ACCTTGTAATACACTTCTAATCAACGG 59.452 37.037 0.00 0.00 0.00 4.44
2214 4894 9.975218 AAACATCTTATATTTTGGTACAGAGGT 57.025 29.630 0.00 0.00 42.39 3.85
2248 4928 7.277319 AGACGTTTTTGTAGGCTAGTTTATAGC 59.723 37.037 0.00 0.00 39.70 2.97
2249 4929 8.699283 AGACGTTTTTGTAGGCTAGTTTATAG 57.301 34.615 0.00 0.00 0.00 1.31
2251 4931 7.974482 AAGACGTTTTTGTAGGCTAGTTTAT 57.026 32.000 0.00 0.00 0.00 1.40
2253 4933 7.974482 ATAAGACGTTTTTGTAGGCTAGTTT 57.026 32.000 0.00 0.00 0.00 2.66
2255 4935 9.662947 AAATATAAGACGTTTTTGTAGGCTAGT 57.337 29.630 0.00 0.00 0.00 2.57
2258 4938 9.005777 TCAAAATATAAGACGTTTTTGTAGGCT 57.994 29.630 16.32 0.00 39.13 4.58
2263 4943 9.763465 CCGTATCAAAATATAAGACGTTTTTGT 57.237 29.630 16.32 9.41 39.13 2.83
2264 4944 9.976255 TCCGTATCAAAATATAAGACGTTTTTG 57.024 29.630 12.50 12.50 39.33 2.44
2271 4996 7.668492 ACTCCCTCCGTATCAAAATATAAGAC 58.332 38.462 0.00 0.00 0.00 3.01
2282 5007 7.427989 AAAGTTTATTACTCCCTCCGTATCA 57.572 36.000 0.00 0.00 35.54 2.15
2283 5008 8.610035 CAAAAAGTTTATTACTCCCTCCGTATC 58.390 37.037 0.00 0.00 35.54 2.24
2284 5009 8.323567 TCAAAAAGTTTATTACTCCCTCCGTAT 58.676 33.333 0.00 0.00 35.54 3.06
2285 5010 7.603784 GTCAAAAAGTTTATTACTCCCTCCGTA 59.396 37.037 0.00 0.00 35.54 4.02
2298 5023 7.199766 TGAGCGTGATTTGTCAAAAAGTTTAT 58.800 30.769 1.31 0.00 0.00 1.40
2299 5024 6.556212 TGAGCGTGATTTGTCAAAAAGTTTA 58.444 32.000 1.31 0.00 0.00 2.01
2300 5025 5.406649 TGAGCGTGATTTGTCAAAAAGTTT 58.593 33.333 1.31 0.00 0.00 2.66
2301 5026 4.992688 TGAGCGTGATTTGTCAAAAAGTT 58.007 34.783 1.31 0.00 0.00 2.66
2302 5027 4.630894 TGAGCGTGATTTGTCAAAAAGT 57.369 36.364 1.31 0.00 0.00 2.66
2303 5028 5.214417 TCATGAGCGTGATTTGTCAAAAAG 58.786 37.500 1.31 0.00 0.00 2.27
2304 5029 5.180367 TCATGAGCGTGATTTGTCAAAAA 57.820 34.783 1.31 0.00 0.00 1.94
2305 5030 4.827304 TCATGAGCGTGATTTGTCAAAA 57.173 36.364 1.31 0.00 0.00 2.44
2306 5031 4.827304 TTCATGAGCGTGATTTGTCAAA 57.173 36.364 0.00 0.00 0.00 2.69
2307 5032 4.827304 TTTCATGAGCGTGATTTGTCAA 57.173 36.364 0.00 0.00 0.00 3.18
2308 5033 4.827304 TTTTCATGAGCGTGATTTGTCA 57.173 36.364 0.00 0.00 0.00 3.58
2309 5034 4.030977 GCATTTTCATGAGCGTGATTTGTC 59.969 41.667 0.00 0.00 31.07 3.18
2310 5035 3.922240 GCATTTTCATGAGCGTGATTTGT 59.078 39.130 0.00 0.00 31.07 2.83
2311 5036 3.921630 TGCATTTTCATGAGCGTGATTTG 59.078 39.130 0.00 0.00 31.07 2.32
2312 5037 4.177165 TGCATTTTCATGAGCGTGATTT 57.823 36.364 0.00 0.00 31.07 2.17
2313 5038 3.853831 TGCATTTTCATGAGCGTGATT 57.146 38.095 0.00 0.00 31.07 2.57
2314 5039 3.853831 TTGCATTTTCATGAGCGTGAT 57.146 38.095 0.00 0.00 31.07 3.06
2315 5040 3.853831 ATTGCATTTTCATGAGCGTGA 57.146 38.095 0.00 0.00 31.07 4.35
2316 5041 4.263677 GTGTATTGCATTTTCATGAGCGTG 59.736 41.667 0.00 0.00 31.07 5.34
2317 5042 4.414852 GTGTATTGCATTTTCATGAGCGT 58.585 39.130 0.00 0.00 31.07 5.07
2318 5043 3.792956 GGTGTATTGCATTTTCATGAGCG 59.207 43.478 0.00 0.00 31.07 5.03
2319 5044 4.802039 CAGGTGTATTGCATTTTCATGAGC 59.198 41.667 0.00 0.00 31.07 4.26
2320 5045 6.198650 TCAGGTGTATTGCATTTTCATGAG 57.801 37.500 0.00 0.00 31.07 2.90
2321 5046 6.587206 TTCAGGTGTATTGCATTTTCATGA 57.413 33.333 0.00 0.00 31.07 3.07
2322 5047 6.311935 CCTTTCAGGTGTATTGCATTTTCATG 59.688 38.462 0.00 0.00 0.00 3.07
2323 5048 6.400568 CCTTTCAGGTGTATTGCATTTTCAT 58.599 36.000 0.00 0.00 0.00 2.57
2324 5049 5.782047 CCTTTCAGGTGTATTGCATTTTCA 58.218 37.500 0.00 0.00 0.00 2.69
2325 5050 4.627035 GCCTTTCAGGTGTATTGCATTTTC 59.373 41.667 0.00 0.00 37.80 2.29
2326 5051 4.040217 TGCCTTTCAGGTGTATTGCATTTT 59.960 37.500 0.00 0.00 37.80 1.82
2327 5052 3.577848 TGCCTTTCAGGTGTATTGCATTT 59.422 39.130 0.00 0.00 37.80 2.32
2328 5053 3.164268 TGCCTTTCAGGTGTATTGCATT 58.836 40.909 0.00 0.00 37.80 3.56
2329 5054 2.756760 CTGCCTTTCAGGTGTATTGCAT 59.243 45.455 0.00 0.00 37.80 3.96
2330 5055 2.161855 CTGCCTTTCAGGTGTATTGCA 58.838 47.619 0.00 0.00 37.80 4.08
2331 5056 2.436417 TCTGCCTTTCAGGTGTATTGC 58.564 47.619 0.00 0.00 43.06 3.56
2332 5057 4.946157 AGAATCTGCCTTTCAGGTGTATTG 59.054 41.667 0.00 0.00 43.06 1.90
2333 5058 5.184892 AGAATCTGCCTTTCAGGTGTATT 57.815 39.130 0.00 0.00 43.06 1.89
2334 5059 4.851639 AGAATCTGCCTTTCAGGTGTAT 57.148 40.909 0.00 0.00 43.06 2.29
2335 5060 4.081087 GGTAGAATCTGCCTTTCAGGTGTA 60.081 45.833 10.25 0.00 43.06 2.90
2336 5061 3.307762 GGTAGAATCTGCCTTTCAGGTGT 60.308 47.826 10.25 0.00 43.06 4.16
2337 5062 3.274288 GGTAGAATCTGCCTTTCAGGTG 58.726 50.000 10.25 0.00 43.06 4.00
2338 5063 2.912956 TGGTAGAATCTGCCTTTCAGGT 59.087 45.455 17.97 0.00 43.06 4.00
2339 5064 3.274288 GTGGTAGAATCTGCCTTTCAGG 58.726 50.000 17.97 0.00 43.06 3.86
2340 5065 2.932614 CGTGGTAGAATCTGCCTTTCAG 59.067 50.000 17.97 2.14 44.21 3.02
2341 5066 2.354704 CCGTGGTAGAATCTGCCTTTCA 60.355 50.000 17.97 0.00 37.16 2.69
2342 5067 2.093658 TCCGTGGTAGAATCTGCCTTTC 60.094 50.000 17.97 8.01 37.16 2.62
2343 5068 1.906574 TCCGTGGTAGAATCTGCCTTT 59.093 47.619 17.97 0.00 37.16 3.11
2344 5069 1.568504 TCCGTGGTAGAATCTGCCTT 58.431 50.000 17.97 0.00 37.16 4.35
2345 5070 1.482593 CTTCCGTGGTAGAATCTGCCT 59.517 52.381 17.97 0.00 37.16 4.75
2346 5071 1.207329 ACTTCCGTGGTAGAATCTGCC 59.793 52.381 10.60 10.60 36.77 4.85
2347 5072 2.541556 GACTTCCGTGGTAGAATCTGC 58.458 52.381 0.00 0.00 0.00 4.26
2348 5073 2.496070 TGGACTTCCGTGGTAGAATCTG 59.504 50.000 0.00 0.00 39.43 2.90
2349 5074 2.816411 TGGACTTCCGTGGTAGAATCT 58.184 47.619 0.00 0.00 39.43 2.40
2350 5075 3.458189 CATGGACTTCCGTGGTAGAATC 58.542 50.000 9.37 0.00 46.69 2.52
2351 5076 3.543680 CATGGACTTCCGTGGTAGAAT 57.456 47.619 9.37 0.00 46.69 2.40
2359 5084 1.679944 CCAGCATTCATGGACTTCCGT 60.680 52.381 0.00 0.00 40.51 4.69
2360 5085 1.019673 CCAGCATTCATGGACTTCCG 58.980 55.000 0.00 0.00 40.51 4.30
2361 5086 0.743097 GCCAGCATTCATGGACTTCC 59.257 55.000 0.00 0.00 40.51 3.46
2362 5087 1.466856 TGCCAGCATTCATGGACTTC 58.533 50.000 0.00 0.00 40.51 3.01
2363 5088 1.927487 TTGCCAGCATTCATGGACTT 58.073 45.000 0.00 0.00 40.51 3.01
2364 5089 1.927487 TTTGCCAGCATTCATGGACT 58.073 45.000 0.00 0.00 40.51 3.85
2365 5090 2.973694 ATTTGCCAGCATTCATGGAC 57.026 45.000 0.00 0.00 40.51 4.02
2366 5091 3.900971 TCTATTTGCCAGCATTCATGGA 58.099 40.909 0.00 0.00 40.51 3.41
2367 5092 4.659111 TTCTATTTGCCAGCATTCATGG 57.341 40.909 0.00 0.00 41.04 3.66
2368 5093 6.277605 TCAATTCTATTTGCCAGCATTCATG 58.722 36.000 0.00 0.00 0.00 3.07
2369 5094 6.474140 TCAATTCTATTTGCCAGCATTCAT 57.526 33.333 0.00 0.00 0.00 2.57
2370 5095 5.918426 TCAATTCTATTTGCCAGCATTCA 57.082 34.783 0.00 0.00 0.00 2.57
2371 5096 7.383300 GGTTATCAATTCTATTTGCCAGCATTC 59.617 37.037 0.00 0.00 0.00 2.67
2372 5097 7.070322 AGGTTATCAATTCTATTTGCCAGCATT 59.930 33.333 0.00 0.00 0.00 3.56
2373 5098 6.552350 AGGTTATCAATTCTATTTGCCAGCAT 59.448 34.615 0.00 0.00 0.00 3.79
2374 5099 5.893255 AGGTTATCAATTCTATTTGCCAGCA 59.107 36.000 0.00 0.00 0.00 4.41
2375 5100 6.396829 AGGTTATCAATTCTATTTGCCAGC 57.603 37.500 0.00 0.00 0.00 4.85
2376 5101 7.134815 CGAAGGTTATCAATTCTATTTGCCAG 58.865 38.462 0.00 0.00 0.00 4.85
2377 5102 6.601613 ACGAAGGTTATCAATTCTATTTGCCA 59.398 34.615 0.00 0.00 0.00 4.92
2378 5103 7.027778 ACGAAGGTTATCAATTCTATTTGCC 57.972 36.000 0.00 0.00 0.00 4.52
2379 5104 9.599322 CATACGAAGGTTATCAATTCTATTTGC 57.401 33.333 0.00 0.00 0.00 3.68
2381 5106 9.847224 ACCATACGAAGGTTATCAATTCTATTT 57.153 29.630 0.00 0.00 35.33 1.40
2382 5107 9.273016 CACCATACGAAGGTTATCAATTCTATT 57.727 33.333 0.00 0.00 37.23 1.73
2383 5108 8.647796 TCACCATACGAAGGTTATCAATTCTAT 58.352 33.333 0.00 0.00 37.23 1.98
2384 5109 7.924412 GTCACCATACGAAGGTTATCAATTCTA 59.076 37.037 0.00 0.00 37.23 2.10
2385 5110 6.761714 GTCACCATACGAAGGTTATCAATTCT 59.238 38.462 0.00 0.00 37.23 2.40
2386 5111 6.292168 CGTCACCATACGAAGGTTATCAATTC 60.292 42.308 0.00 0.00 45.68 2.17
2387 5112 5.522460 CGTCACCATACGAAGGTTATCAATT 59.478 40.000 0.00 0.00 45.68 2.32
2388 5113 5.047847 CGTCACCATACGAAGGTTATCAAT 58.952 41.667 0.00 0.00 45.68 2.57
2389 5114 4.426416 CGTCACCATACGAAGGTTATCAA 58.574 43.478 0.00 0.00 45.68 2.57
2390 5115 3.735820 GCGTCACCATACGAAGGTTATCA 60.736 47.826 0.00 0.00 45.68 2.15
2391 5116 2.793232 GCGTCACCATACGAAGGTTATC 59.207 50.000 0.00 0.00 45.68 1.75
2392 5117 2.166870 TGCGTCACCATACGAAGGTTAT 59.833 45.455 0.00 0.00 45.68 1.89
2393 5118 1.545136 TGCGTCACCATACGAAGGTTA 59.455 47.619 0.00 0.00 45.68 2.85
2394 5119 0.319083 TGCGTCACCATACGAAGGTT 59.681 50.000 0.00 0.00 45.68 3.50
2395 5120 0.319083 TTGCGTCACCATACGAAGGT 59.681 50.000 0.00 0.00 45.68 3.50
2396 5121 0.999406 CTTGCGTCACCATACGAAGG 59.001 55.000 0.00 0.00 45.68 3.46
2397 5122 1.654105 GACTTGCGTCACCATACGAAG 59.346 52.381 0.00 4.32 45.68 3.79
2398 5123 1.271379 AGACTTGCGTCACCATACGAA 59.729 47.619 0.00 0.00 45.68 3.85
2399 5124 0.885879 AGACTTGCGTCACCATACGA 59.114 50.000 0.00 0.00 45.68 3.43
2400 5125 1.390123 CAAGACTTGCGTCACCATACG 59.610 52.381 1.43 0.00 42.73 3.06
2401 5126 2.413837 ACAAGACTTGCGTCACCATAC 58.586 47.619 15.24 0.00 42.73 2.39
2402 5127 2.831685 ACAAGACTTGCGTCACCATA 57.168 45.000 15.24 0.00 42.73 2.74
2403 5128 1.967319 AACAAGACTTGCGTCACCAT 58.033 45.000 15.24 0.00 42.73 3.55
2404 5129 2.206750 GTAACAAGACTTGCGTCACCA 58.793 47.619 15.24 0.00 42.73 4.17
2405 5130 2.206750 TGTAACAAGACTTGCGTCACC 58.793 47.619 15.24 0.00 42.73 4.02
2406 5131 3.936902 TTGTAACAAGACTTGCGTCAC 57.063 42.857 15.24 8.29 42.73 3.67
2407 5132 4.948608 TTTTGTAACAAGACTTGCGTCA 57.051 36.364 15.24 8.58 42.73 4.35
2408 5133 5.748592 AGATTTTGTAACAAGACTTGCGTC 58.251 37.500 15.24 6.19 40.54 5.19
2409 5134 5.751243 AGATTTTGTAACAAGACTTGCGT 57.249 34.783 15.24 6.19 0.00 5.24
2410 5135 6.198687 TGAAGATTTTGTAACAAGACTTGCG 58.801 36.000 15.24 0.00 0.00 4.85
2411 5136 9.677567 TTATGAAGATTTTGTAACAAGACTTGC 57.322 29.630 15.24 0.00 0.00 4.01
2417 5142 9.774742 GGCTAGTTATGAAGATTTTGTAACAAG 57.225 33.333 0.00 0.00 0.00 3.16
2418 5143 9.515226 AGGCTAGTTATGAAGATTTTGTAACAA 57.485 29.630 0.00 0.00 0.00 2.83
2419 5144 8.946085 CAGGCTAGTTATGAAGATTTTGTAACA 58.054 33.333 0.00 0.00 0.00 2.41
2420 5145 7.910683 GCAGGCTAGTTATGAAGATTTTGTAAC 59.089 37.037 0.00 0.00 0.00 2.50
2421 5146 7.829211 AGCAGGCTAGTTATGAAGATTTTGTAA 59.171 33.333 0.00 0.00 0.00 2.41
2422 5147 7.280876 CAGCAGGCTAGTTATGAAGATTTTGTA 59.719 37.037 0.00 0.00 0.00 2.41
2423 5148 6.094603 CAGCAGGCTAGTTATGAAGATTTTGT 59.905 38.462 0.00 0.00 0.00 2.83
2424 5149 6.493116 CAGCAGGCTAGTTATGAAGATTTTG 58.507 40.000 0.00 0.00 0.00 2.44
2425 5150 5.067023 GCAGCAGGCTAGTTATGAAGATTTT 59.933 40.000 0.00 0.00 40.25 1.82
2426 5151 4.578105 GCAGCAGGCTAGTTATGAAGATTT 59.422 41.667 0.00 0.00 40.25 2.17
2427 5152 4.133078 GCAGCAGGCTAGTTATGAAGATT 58.867 43.478 0.00 0.00 40.25 2.40
2428 5153 3.135348 TGCAGCAGGCTAGTTATGAAGAT 59.865 43.478 0.00 0.00 45.15 2.40
2429 5154 2.501316 TGCAGCAGGCTAGTTATGAAGA 59.499 45.455 0.00 0.00 45.15 2.87
2430 5155 2.611292 GTGCAGCAGGCTAGTTATGAAG 59.389 50.000 0.00 0.00 45.15 3.02
2431 5156 2.632377 GTGCAGCAGGCTAGTTATGAA 58.368 47.619 0.00 0.00 45.15 2.57
2432 5157 1.134401 GGTGCAGCAGGCTAGTTATGA 60.134 52.381 11.86 0.00 45.15 2.15
2433 5158 1.134280 AGGTGCAGCAGGCTAGTTATG 60.134 52.381 19.63 0.00 45.15 1.90
2434 5159 1.134280 CAGGTGCAGCAGGCTAGTTAT 60.134 52.381 19.63 0.00 45.15 1.89
2435 5160 0.250234 CAGGTGCAGCAGGCTAGTTA 59.750 55.000 19.63 0.00 45.15 2.24
2436 5161 1.002868 CAGGTGCAGCAGGCTAGTT 60.003 57.895 19.63 0.00 45.15 2.24
2437 5162 1.772819 AACAGGTGCAGCAGGCTAGT 61.773 55.000 19.63 3.66 45.15 2.57
2438 5163 0.607489 AAACAGGTGCAGCAGGCTAG 60.607 55.000 19.63 3.03 45.15 3.42
2439 5164 0.178992 AAAACAGGTGCAGCAGGCTA 60.179 50.000 19.63 0.00 45.15 3.93
2440 5165 0.178992 TAAAACAGGTGCAGCAGGCT 60.179 50.000 19.63 0.00 45.15 4.58
2441 5166 0.673437 TTAAAACAGGTGCAGCAGGC 59.327 50.000 19.63 0.00 45.13 4.85
2442 5167 2.557924 TGATTAAAACAGGTGCAGCAGG 59.442 45.455 19.63 12.23 0.00 4.85
2443 5168 3.921119 TGATTAAAACAGGTGCAGCAG 57.079 42.857 19.63 13.21 0.00 4.24
2444 5169 3.614630 GCATGATTAAAACAGGTGCAGCA 60.615 43.478 19.63 0.00 0.00 4.41
2445 5170 2.925563 GCATGATTAAAACAGGTGCAGC 59.074 45.455 8.11 8.11 0.00 5.25
2446 5171 4.177165 TGCATGATTAAAACAGGTGCAG 57.823 40.909 0.00 0.00 36.33 4.41
2447 5172 4.496360 CATGCATGATTAAAACAGGTGCA 58.504 39.130 22.59 12.94 44.05 4.57
2448 5173 3.866910 CCATGCATGATTAAAACAGGTGC 59.133 43.478 28.31 0.00 0.00 5.01
2449 5174 3.866910 GCCATGCATGATTAAAACAGGTG 59.133 43.478 28.31 7.28 0.00 4.00
2450 5175 3.770933 AGCCATGCATGATTAAAACAGGT 59.229 39.130 28.31 10.22 0.00 4.00
2451 5176 4.395959 AGCCATGCATGATTAAAACAGG 57.604 40.909 28.31 8.12 0.00 4.00
2452 5177 5.640357 ACAAAGCCATGCATGATTAAAACAG 59.360 36.000 28.31 8.75 0.00 3.16
2453 5178 5.549347 ACAAAGCCATGCATGATTAAAACA 58.451 33.333 28.31 0.00 0.00 2.83
2454 5179 5.870978 AGACAAAGCCATGCATGATTAAAAC 59.129 36.000 28.31 13.37 0.00 2.43
2455 5180 6.040209 AGACAAAGCCATGCATGATTAAAA 57.960 33.333 28.31 0.00 0.00 1.52
2456 5181 5.664294 AGACAAAGCCATGCATGATTAAA 57.336 34.783 28.31 0.00 0.00 1.52
2457 5182 5.664294 AAGACAAAGCCATGCATGATTAA 57.336 34.783 28.31 0.00 0.00 1.40
2458 5183 5.887598 ACTAAGACAAAGCCATGCATGATTA 59.112 36.000 28.31 11.30 0.00 1.75
2459 5184 4.708421 ACTAAGACAAAGCCATGCATGATT 59.292 37.500 28.31 18.26 0.00 2.57
2460 5185 4.275810 ACTAAGACAAAGCCATGCATGAT 58.724 39.130 28.31 13.19 0.00 2.45
2461 5186 3.689347 ACTAAGACAAAGCCATGCATGA 58.311 40.909 28.31 2.69 0.00 3.07
2462 5187 4.445452 AACTAAGACAAAGCCATGCATG 57.555 40.909 20.19 20.19 0.00 4.06
2463 5188 5.009631 TGTAACTAAGACAAAGCCATGCAT 58.990 37.500 0.00 0.00 0.00 3.96
2464 5189 4.393834 TGTAACTAAGACAAAGCCATGCA 58.606 39.130 0.00 0.00 0.00 3.96
2465 5190 5.355350 AGATGTAACTAAGACAAAGCCATGC 59.645 40.000 0.00 0.00 0.00 4.06
2466 5191 6.372659 ACAGATGTAACTAAGACAAAGCCATG 59.627 38.462 0.00 0.00 0.00 3.66
2467 5192 6.476378 ACAGATGTAACTAAGACAAAGCCAT 58.524 36.000 0.00 0.00 0.00 4.40
2468 5193 5.865085 ACAGATGTAACTAAGACAAAGCCA 58.135 37.500 0.00 0.00 0.00 4.75
2469 5194 7.321153 TCTACAGATGTAACTAAGACAAAGCC 58.679 38.462 0.00 0.00 0.00 4.35
2470 5195 7.009723 GCTCTACAGATGTAACTAAGACAAAGC 59.990 40.741 0.00 0.00 0.00 3.51
2471 5196 8.029522 TGCTCTACAGATGTAACTAAGACAAAG 58.970 37.037 0.00 0.00 0.00 2.77
2472 5197 7.892609 TGCTCTACAGATGTAACTAAGACAAA 58.107 34.615 0.00 0.00 0.00 2.83
2473 5198 7.462571 TGCTCTACAGATGTAACTAAGACAA 57.537 36.000 0.00 0.00 0.00 3.18
2490 5215 6.780706 TGTTTAAAGCTTGTACTGCTCTAC 57.219 37.500 0.00 9.66 40.22 2.59
2494 5219 8.197439 AGAAAAATGTTTAAAGCTTGTACTGCT 58.803 29.630 0.00 7.88 43.32 4.24
2508 5233 8.458843 GCCATTAGAGTAGCAGAAAAATGTTTA 58.541 33.333 0.00 0.00 0.00 2.01
2509 5234 7.315890 GCCATTAGAGTAGCAGAAAAATGTTT 58.684 34.615 0.00 0.00 0.00 2.83
2618 5467 0.946528 TGTGATGTGCTGCACTCAAC 59.053 50.000 30.43 23.73 36.05 3.18
2619 5468 1.677942 TTGTGATGTGCTGCACTCAA 58.322 45.000 30.43 24.07 36.05 3.02
2737 5587 1.876156 GCAGGGTCAAAGTTCAGTCAG 59.124 52.381 0.00 0.00 0.00 3.51
2739 5589 1.876156 CAGCAGGGTCAAAGTTCAGTC 59.124 52.381 0.00 0.00 0.00 3.51
2750 5600 0.321122 CTGTGAAGGACAGCAGGGTC 60.321 60.000 0.00 0.00 45.72 4.46
2807 5657 2.888414 CCATCACTGTTTTAACCCCGTT 59.112 45.455 0.00 0.00 0.00 4.44
2908 5758 0.387622 CGTTACGAGCGTCCTTCCAA 60.388 55.000 0.00 0.00 0.00 3.53
2920 5770 2.159198 GGCCTTAACTGGATCGTTACGA 60.159 50.000 10.62 10.62 41.13 3.43
3082 5932 3.647771 GGGGGCTCAAAGGACCGT 61.648 66.667 0.00 0.00 34.56 4.83
3146 5996 0.537188 TGCTTTTGTTTTTGCGGGGA 59.463 45.000 0.00 0.00 0.00 4.81
3147 5997 1.263752 CATGCTTTTGTTTTTGCGGGG 59.736 47.619 0.00 0.00 0.00 5.73
3148 5998 1.939255 ACATGCTTTTGTTTTTGCGGG 59.061 42.857 0.00 0.00 0.00 6.13
3149 5999 4.785669 TTACATGCTTTTGTTTTTGCGG 57.214 36.364 0.00 0.00 0.00 5.69
3150 6000 6.190962 ACATTTACATGCTTTTGTTTTTGCG 58.809 32.000 0.00 0.00 33.05 4.85
3151 6001 7.097490 CGAACATTTACATGCTTTTGTTTTTGC 60.097 33.333 0.00 0.00 33.05 3.68
3152 6002 8.113062 TCGAACATTTACATGCTTTTGTTTTTG 58.887 29.630 0.00 0.00 33.05 2.44
3153 6003 8.113675 GTCGAACATTTACATGCTTTTGTTTTT 58.886 29.630 0.00 0.00 33.05 1.94
3154 6004 7.276658 TGTCGAACATTTACATGCTTTTGTTTT 59.723 29.630 0.00 0.00 33.05 2.43
3155 6005 6.754209 TGTCGAACATTTACATGCTTTTGTTT 59.246 30.769 0.00 0.00 33.05 2.83
3156 6006 6.269315 TGTCGAACATTTACATGCTTTTGTT 58.731 32.000 0.00 0.00 33.05 2.83
3157 6007 5.826586 TGTCGAACATTTACATGCTTTTGT 58.173 33.333 0.00 0.00 33.05 2.83
3158 6008 6.932901 ATGTCGAACATTTACATGCTTTTG 57.067 33.333 0.00 0.00 34.67 2.44
3159 6009 8.511321 TCTAATGTCGAACATTTACATGCTTTT 58.489 29.630 15.21 0.00 45.80 2.27
3160 6010 8.039603 TCTAATGTCGAACATTTACATGCTTT 57.960 30.769 15.21 0.00 45.80 3.51
3161 6011 7.549134 TCTCTAATGTCGAACATTTACATGCTT 59.451 33.333 15.21 0.00 45.80 3.91
3162 6012 7.010552 GTCTCTAATGTCGAACATTTACATGCT 59.989 37.037 15.21 0.00 45.80 3.79
3163 6013 7.119997 GTCTCTAATGTCGAACATTTACATGC 58.880 38.462 15.21 0.00 45.80 4.06
3164 6014 7.220108 TCGTCTCTAATGTCGAACATTTACATG 59.780 37.037 15.21 0.00 45.80 3.21
3165 6015 7.255569 TCGTCTCTAATGTCGAACATTTACAT 58.744 34.615 15.21 0.00 45.80 2.29
3166 6016 6.614160 TCGTCTCTAATGTCGAACATTTACA 58.386 36.000 15.21 0.00 45.80 2.41
3167 6017 7.547961 CATCGTCTCTAATGTCGAACATTTAC 58.452 38.462 15.21 9.76 45.80 2.01
3168 6018 6.198403 GCATCGTCTCTAATGTCGAACATTTA 59.802 38.462 15.21 6.81 45.80 1.40
3169 6019 5.005779 GCATCGTCTCTAATGTCGAACATTT 59.994 40.000 15.21 0.00 45.80 2.32
3171 6021 4.045104 GCATCGTCTCTAATGTCGAACAT 58.955 43.478 0.00 0.00 41.31 2.71
3172 6022 3.128764 AGCATCGTCTCTAATGTCGAACA 59.871 43.478 0.00 0.00 35.99 3.18
3173 6023 3.696898 AGCATCGTCTCTAATGTCGAAC 58.303 45.455 0.00 0.00 35.99 3.95
3174 6024 4.371855 AAGCATCGTCTCTAATGTCGAA 57.628 40.909 0.00 0.00 35.99 3.71
3175 6025 4.105486 CAAAGCATCGTCTCTAATGTCGA 58.895 43.478 0.00 0.00 36.77 4.20
3176 6026 3.302092 GCAAAGCATCGTCTCTAATGTCG 60.302 47.826 0.00 0.00 0.00 4.35
3177 6027 3.868077 AGCAAAGCATCGTCTCTAATGTC 59.132 43.478 0.00 0.00 0.00 3.06
3178 6028 3.866651 AGCAAAGCATCGTCTCTAATGT 58.133 40.909 0.00 0.00 0.00 2.71
3191 6041 2.978000 TCGATCCCGAGCAAAGCA 59.022 55.556 0.00 0.00 40.30 3.91
3345 6195 5.404366 CAGATTTGTTGATTGCAAGGTTCAG 59.596 40.000 4.94 0.00 34.01 3.02
3458 6308 2.811542 AAAAGCTGCCGGAGAGAGCC 62.812 60.000 5.05 0.00 32.96 4.70
3537 6387 2.321060 GCGATGGCGTGATTCGTG 59.679 61.111 0.00 0.00 42.13 4.35
3538 6388 2.890474 GGCGATGGCGTGATTCGT 60.890 61.111 0.00 0.00 41.24 3.85
3555 6405 5.181245 AGTGACAATTAACATGGAACGAAGG 59.819 40.000 0.00 0.00 0.00 3.46
3556 6406 6.073276 TCAGTGACAATTAACATGGAACGAAG 60.073 38.462 0.00 0.00 0.00 3.79
3558 6408 5.301555 TCAGTGACAATTAACATGGAACGA 58.698 37.500 0.00 0.00 0.00 3.85
3559 6409 5.605564 TCAGTGACAATTAACATGGAACG 57.394 39.130 0.00 0.00 0.00 3.95
3560 6410 9.559958 CTAAATCAGTGACAATTAACATGGAAC 57.440 33.333 0.00 0.00 0.00 3.62
3561 6411 9.295825 ACTAAATCAGTGACAATTAACATGGAA 57.704 29.630 0.00 0.00 35.62 3.53
3562 6412 8.862325 ACTAAATCAGTGACAATTAACATGGA 57.138 30.769 0.00 0.00 35.62 3.41
3571 6421 8.686334 ACAACTTTGAACTAAATCAGTGACAAT 58.314 29.630 0.00 0.00 37.63 2.71
3572 6422 8.050778 ACAACTTTGAACTAAATCAGTGACAA 57.949 30.769 0.00 0.00 37.63 3.18
3573 6423 7.624360 ACAACTTTGAACTAAATCAGTGACA 57.376 32.000 0.00 0.00 37.63 3.58
3574 6424 8.827677 AGTACAACTTTGAACTAAATCAGTGAC 58.172 33.333 0.00 0.00 37.63 3.67
3575 6425 8.958119 AGTACAACTTTGAACTAAATCAGTGA 57.042 30.769 0.00 0.00 37.63 3.41
3582 6432 8.126700 GCTGCTTTAGTACAACTTTGAACTAAA 58.873 33.333 0.00 6.41 0.00 1.85
3584 6434 6.073980 CGCTGCTTTAGTACAACTTTGAACTA 60.074 38.462 0.00 0.00 0.00 2.24
3585 6435 5.277345 CGCTGCTTTAGTACAACTTTGAACT 60.277 40.000 0.00 0.00 0.00 3.01
3586 6436 4.904154 CGCTGCTTTAGTACAACTTTGAAC 59.096 41.667 0.00 0.00 0.00 3.18
3587 6437 4.812091 TCGCTGCTTTAGTACAACTTTGAA 59.188 37.500 0.00 0.00 0.00 2.69
3589 6439 4.025229 TGTCGCTGCTTTAGTACAACTTTG 60.025 41.667 0.00 0.00 0.00 2.77
3591 6441 3.724374 TGTCGCTGCTTTAGTACAACTT 58.276 40.909 0.00 0.00 0.00 2.66
3593 6443 3.057734 ACTGTCGCTGCTTTAGTACAAC 58.942 45.455 0.00 0.00 0.00 3.32
3596 6446 7.434307 TCATATTAACTGTCGCTGCTTTAGTAC 59.566 37.037 0.00 0.00 0.00 2.73
3597 6447 7.485810 TCATATTAACTGTCGCTGCTTTAGTA 58.514 34.615 0.00 0.00 0.00 1.82
3598 6448 6.338146 TCATATTAACTGTCGCTGCTTTAGT 58.662 36.000 0.00 0.00 0.00 2.24
3599 6449 6.828502 TCATATTAACTGTCGCTGCTTTAG 57.171 37.500 0.00 0.00 0.00 1.85
3600 6450 7.494298 TGATTCATATTAACTGTCGCTGCTTTA 59.506 33.333 0.00 0.00 0.00 1.85
3601 6451 6.316140 TGATTCATATTAACTGTCGCTGCTTT 59.684 34.615 0.00 0.00 0.00 3.51
3602 6452 5.817296 TGATTCATATTAACTGTCGCTGCTT 59.183 36.000 0.00 0.00 0.00 3.91
3603 6453 5.359756 TGATTCATATTAACTGTCGCTGCT 58.640 37.500 0.00 0.00 0.00 4.24
3604 6454 5.463392 TCTGATTCATATTAACTGTCGCTGC 59.537 40.000 0.00 0.00 0.00 5.25
3606 6456 6.219473 CCTCTGATTCATATTAACTGTCGCT 58.781 40.000 0.00 0.00 0.00 4.93
3607 6457 5.406780 CCCTCTGATTCATATTAACTGTCGC 59.593 44.000 0.00 0.00 0.00 5.19
3608 6458 6.422100 CACCCTCTGATTCATATTAACTGTCG 59.578 42.308 0.00 0.00 0.00 4.35
3609 6459 7.275920 ACACCCTCTGATTCATATTAACTGTC 58.724 38.462 0.00 0.00 0.00 3.51
3610 6460 7.200434 ACACCCTCTGATTCATATTAACTGT 57.800 36.000 0.00 0.00 0.00 3.55
3611 6461 8.204160 TGTACACCCTCTGATTCATATTAACTG 58.796 37.037 0.00 0.00 0.00 3.16
3612 6462 8.319057 TGTACACCCTCTGATTCATATTAACT 57.681 34.615 0.00 0.00 0.00 2.24
3619 6469 9.331466 AGAATATATGTACACCCTCTGATTCAT 57.669 33.333 0.00 0.00 0.00 2.57
3620 6470 8.588472 CAGAATATATGTACACCCTCTGATTCA 58.412 37.037 0.00 0.00 32.58 2.57
3621 6471 7.547370 GCAGAATATATGTACACCCTCTGATTC 59.453 40.741 18.94 12.16 32.58 2.52
3622 6472 7.390027 GCAGAATATATGTACACCCTCTGATT 58.610 38.462 18.94 5.87 32.58 2.57
3623 6473 6.350528 CGCAGAATATATGTACACCCTCTGAT 60.351 42.308 18.94 0.00 32.58 2.90
3624 6474 5.048013 CGCAGAATATATGTACACCCTCTGA 60.048 44.000 18.94 0.00 32.58 3.27
3625 6475 5.164233 CGCAGAATATATGTACACCCTCTG 58.836 45.833 0.00 7.69 33.72 3.35
3626 6476 4.220821 CCGCAGAATATATGTACACCCTCT 59.779 45.833 0.00 0.00 0.00 3.69
3627 6477 4.495422 CCGCAGAATATATGTACACCCTC 58.505 47.826 0.00 0.00 0.00 4.30
3628 6478 3.306780 GCCGCAGAATATATGTACACCCT 60.307 47.826 0.00 0.00 0.00 4.34
3629 6479 3.000727 GCCGCAGAATATATGTACACCC 58.999 50.000 0.00 0.00 0.00 4.61
3630 6480 2.666508 CGCCGCAGAATATATGTACACC 59.333 50.000 0.00 0.00 0.00 4.16
3631 6481 2.666508 CCGCCGCAGAATATATGTACAC 59.333 50.000 0.00 0.00 0.00 2.90
3632 6482 2.297880 ACCGCCGCAGAATATATGTACA 59.702 45.455 0.00 0.00 0.00 2.90
3633 6483 2.666508 CACCGCCGCAGAATATATGTAC 59.333 50.000 0.00 0.00 0.00 2.90
3634 6484 2.559231 TCACCGCCGCAGAATATATGTA 59.441 45.455 0.00 0.00 0.00 2.29
3635 6485 1.343142 TCACCGCCGCAGAATATATGT 59.657 47.619 0.00 0.00 0.00 2.29
3636 6486 2.078849 TCACCGCCGCAGAATATATG 57.921 50.000 0.00 0.00 0.00 1.78
3637 6487 2.831685 TTCACCGCCGCAGAATATAT 57.168 45.000 0.00 0.00 0.00 0.86
3638 6488 2.036604 TGATTCACCGCCGCAGAATATA 59.963 45.455 2.88 0.00 32.51 0.86
3662 6534 0.607489 GATAGCTCCGCCATTGCCAT 60.607 55.000 0.00 0.00 0.00 4.40
3671 6545 1.810606 TAGCCTGCAGATAGCTCCGC 61.811 60.000 17.39 7.29 45.94 5.54
3687 6561 4.672801 GCATGCAAGACCTACAGTTTTAGC 60.673 45.833 14.21 0.00 0.00 3.09
3718 6592 4.389374 TGGAGCTCTGTTAGTTTCTTTGG 58.611 43.478 14.64 0.00 0.00 3.28
3720 6594 6.207614 GGAAATGGAGCTCTGTTAGTTTCTTT 59.792 38.462 14.64 0.00 0.00 2.52
3786 6660 8.028354 CACATGCAAGAAGAAACCAAATATACA 58.972 33.333 0.00 0.00 0.00 2.29
3787 6661 7.009540 GCACATGCAAGAAGAAACCAAATATAC 59.990 37.037 0.00 0.00 41.59 1.47
3833 6707 2.159198 CCAAATGCATCCTCCTTTTCGG 60.159 50.000 0.00 0.00 0.00 4.30
3943 6818 4.409218 AGCTTTGGCGTGCATGCG 62.409 61.111 23.96 11.66 44.37 4.73
3972 6847 8.109705 ACAACAACAATATGAGTATCTGCAAA 57.890 30.769 0.00 0.00 34.92 3.68
4030 7548 6.833041 TGAGATTTTGGTTTCCTGTACTACA 58.167 36.000 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.