Multiple sequence alignment - TraesCS3D01G105000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G105000 chr3D 100.000 4048 0 0 1 4048 57233005 57237052 0.000000e+00 7476.0
1 TraesCS3D01G105000 chr3D 97.680 905 20 1 3144 4048 250259012 250259915 0.000000e+00 1554.0
2 TraesCS3D01G105000 chr3A 94.779 1111 57 1 1957 3067 66354032 66355141 0.000000e+00 1729.0
3 TraesCS3D01G105000 chr3A 89.180 841 37 23 644 1472 66353178 66353976 0.000000e+00 1000.0
4 TraesCS3D01G105000 chr3A 89.071 183 15 5 481 661 66352676 66352855 5.270000e-54 222.0
5 TraesCS3D01G105000 chr3A 92.308 39 3 0 1630 1668 151320081 151320043 5.650000e-04 56.5
6 TraesCS3D01G105000 chr3B 94.155 1112 65 0 1957 3068 90165844 90166955 0.000000e+00 1694.0
7 TraesCS3D01G105000 chr3B 92.120 533 34 4 940 1472 90165273 90165797 0.000000e+00 745.0
8 TraesCS3D01G105000 chr3B 89.054 539 37 10 415 935 90164702 90165236 0.000000e+00 649.0
9 TraesCS3D01G105000 chr3B 87.430 358 38 3 1 351 90164016 90164373 4.870000e-109 405.0
10 TraesCS3D01G105000 chr3B 100.000 33 0 0 1630 1662 193979066 193979034 1.210000e-05 62.1
11 TraesCS3D01G105000 chr4D 97.680 905 19 2 3144 4048 161214819 161213917 0.000000e+00 1554.0
12 TraesCS3D01G105000 chr4D 97.459 905 22 1 3144 4048 164861365 164860462 0.000000e+00 1543.0
13 TraesCS3D01G105000 chr4D 97.456 904 22 1 3145 4048 204796707 204797609 0.000000e+00 1541.0
14 TraesCS3D01G105000 chr7D 97.459 905 22 1 3144 4048 331705004 331704101 0.000000e+00 1543.0
15 TraesCS3D01G105000 chr7D 97.459 905 22 1 3144 4048 337099421 337098518 0.000000e+00 1543.0
16 TraesCS3D01G105000 chr7D 97.459 905 22 1 3144 4048 337592667 337593570 0.000000e+00 1543.0
17 TraesCS3D01G105000 chr7D 97.351 906 22 2 3144 4048 330608743 330609647 0.000000e+00 1539.0
18 TraesCS3D01G105000 chr7D 79.426 418 77 9 1052 1466 47403414 47403003 1.840000e-73 287.0
19 TraesCS3D01G105000 chr5D 97.459 905 22 1 3144 4048 188348510 188347607 0.000000e+00 1543.0
20 TraesCS3D01G105000 chr1B 83.962 424 67 1 1045 1467 670187770 670187347 4.870000e-109 405.0
21 TraesCS3D01G105000 chr4A 79.087 416 82 5 1052 1466 662325162 662325573 8.570000e-72 281.0
22 TraesCS3D01G105000 chrUn 84.279 229 34 2 1052 1279 296183021 296183248 5.270000e-54 222.0
23 TraesCS3D01G105000 chr6A 92.857 42 3 0 1613 1654 537874031 537873990 1.210000e-05 62.1
24 TraesCS3D01G105000 chr7A 100.000 32 0 0 1221 1252 49476452 49476483 4.370000e-05 60.2
25 TraesCS3D01G105000 chr6D 97.059 34 0 1 360 392 168219170 168219203 5.650000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G105000 chr3D 57233005 57237052 4047 False 7476.000000 7476 100.00000 1 4048 1 chr3D.!!$F1 4047
1 TraesCS3D01G105000 chr3D 250259012 250259915 903 False 1554.000000 1554 97.68000 3144 4048 1 chr3D.!!$F2 904
2 TraesCS3D01G105000 chr3A 66352676 66355141 2465 False 983.666667 1729 91.01000 481 3067 3 chr3A.!!$F1 2586
3 TraesCS3D01G105000 chr3B 90164016 90166955 2939 False 873.250000 1694 90.68975 1 3068 4 chr3B.!!$F1 3067
4 TraesCS3D01G105000 chr4D 161213917 161214819 902 True 1554.000000 1554 97.68000 3144 4048 1 chr4D.!!$R1 904
5 TraesCS3D01G105000 chr4D 164860462 164861365 903 True 1543.000000 1543 97.45900 3144 4048 1 chr4D.!!$R2 904
6 TraesCS3D01G105000 chr4D 204796707 204797609 902 False 1541.000000 1541 97.45600 3145 4048 1 chr4D.!!$F1 903
7 TraesCS3D01G105000 chr7D 331704101 331705004 903 True 1543.000000 1543 97.45900 3144 4048 1 chr7D.!!$R2 904
8 TraesCS3D01G105000 chr7D 337098518 337099421 903 True 1543.000000 1543 97.45900 3144 4048 1 chr7D.!!$R3 904
9 TraesCS3D01G105000 chr7D 337592667 337593570 903 False 1543.000000 1543 97.45900 3144 4048 1 chr7D.!!$F2 904
10 TraesCS3D01G105000 chr7D 330608743 330609647 904 False 1539.000000 1539 97.35100 3144 4048 1 chr7D.!!$F1 904
11 TraesCS3D01G105000 chr5D 188347607 188348510 903 True 1543.000000 1543 97.45900 3144 4048 1 chr5D.!!$R1 904

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
354 362 0.182775 AAGGAGGTTTTGTGTCGGCT 59.817 50.0 0.0 0.0 0.00 5.52 F
526 798 0.451783 GGTGATTTGGTGATCCGTGC 59.548 55.0 0.0 0.0 36.30 5.34 F
929 1559 1.546834 CAGCCTCGCTACGTTAGTTC 58.453 55.0 0.0 0.0 36.40 3.01 F
2060 2722 0.107945 AATTCAGCCTCTGTCTCGGC 60.108 55.0 0.0 0.0 46.65 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1398 2060 0.394938 TGGCCATGTACACGTTCACT 59.605 50.0 0.0 0.0 0.00 3.41 R
1588 2250 0.524816 ATACGGTACAGACGCAAGCG 60.525 55.0 13.5 13.5 46.03 4.68 R
2698 3360 0.105039 GAAGCCGGTGGAGTAGATGG 59.895 60.0 1.9 0.0 0.00 3.51 R
3123 3785 0.035056 CAGGCTCCACCCTTTTCGAT 60.035 55.0 0.0 0.0 40.58 3.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 2.054232 ATCGTCTCGGACATGGTACT 57.946 50.000 0.00 0.00 32.09 2.73
55 56 8.598202 TGGTACTACAATGGTGAACTCTAATA 57.402 34.615 0.00 0.00 0.00 0.98
81 82 7.733773 TTAAACTGACCTCATCTTCCTATGA 57.266 36.000 0.00 0.00 34.72 2.15
108 110 2.351726 GCCACCTTTATGATCGTGTCAC 59.648 50.000 0.00 0.00 40.28 3.67
110 112 3.865745 CCACCTTTATGATCGTGTCACTC 59.134 47.826 0.65 0.00 40.28 3.51
112 114 5.163550 CCACCTTTATGATCGTGTCACTCTA 60.164 44.000 0.65 0.00 40.28 2.43
143 150 3.230976 CCTCCCTGTTTTTGGTAAAGCT 58.769 45.455 0.00 0.00 0.00 3.74
146 153 5.056553 TCCCTGTTTTTGGTAAAGCTAGT 57.943 39.130 0.00 0.00 0.00 2.57
179 187 1.480545 AGGTTGCACCACTTTTGTTCC 59.519 47.619 7.86 0.00 41.95 3.62
180 188 1.205893 GGTTGCACCACTTTTGTTCCA 59.794 47.619 0.00 0.00 38.42 3.53
190 198 4.141959 CCACTTTTGTTCCAAGGACAATGT 60.142 41.667 0.00 0.00 0.00 2.71
193 201 4.647424 TTTGTTCCAAGGACAATGTCAC 57.353 40.909 15.86 4.14 33.68 3.67
244 252 3.112709 GCGAACGTCTGGTCTGCC 61.113 66.667 0.00 0.00 0.00 4.85
260 268 1.307355 TGCCGACATGAATGCAGGTG 61.307 55.000 0.00 0.00 39.45 4.00
267 275 2.308570 ACATGAATGCAGGTGGGAAGTA 59.691 45.455 0.00 0.00 37.69 2.24
269 277 1.985159 TGAATGCAGGTGGGAAGTAGT 59.015 47.619 0.00 0.00 0.00 2.73
296 304 3.733960 TCACGTCCGCTCTGACCG 61.734 66.667 0.00 0.00 31.35 4.79
339 347 2.922950 CGGACACGACGGGAAAGGA 61.923 63.158 2.90 0.00 44.60 3.36
347 355 1.812708 CGACGGGAAAGGAGGTTTTGT 60.813 52.381 0.00 0.00 0.00 2.83
351 359 1.607148 GGGAAAGGAGGTTTTGTGTCG 59.393 52.381 0.00 0.00 0.00 4.35
352 360 1.607148 GGAAAGGAGGTTTTGTGTCGG 59.393 52.381 0.00 0.00 0.00 4.79
353 361 1.001706 GAAAGGAGGTTTTGTGTCGGC 60.002 52.381 0.00 0.00 0.00 5.54
354 362 0.182775 AAGGAGGTTTTGTGTCGGCT 59.817 50.000 0.00 0.00 0.00 5.52
355 363 0.535102 AGGAGGTTTTGTGTCGGCTG 60.535 55.000 0.00 0.00 0.00 4.85
356 364 1.515521 GGAGGTTTTGTGTCGGCTGG 61.516 60.000 0.00 0.00 0.00 4.85
357 365 1.515521 GAGGTTTTGTGTCGGCTGGG 61.516 60.000 0.00 0.00 0.00 4.45
358 366 2.561037 GGTTTTGTGTCGGCTGGGG 61.561 63.158 0.00 0.00 0.00 4.96
359 367 2.203422 TTTTGTGTCGGCTGGGGG 60.203 61.111 0.00 0.00 0.00 5.40
360 368 3.063197 TTTTGTGTCGGCTGGGGGT 62.063 57.895 0.00 0.00 0.00 4.95
361 369 3.783362 TTTGTGTCGGCTGGGGGTG 62.783 63.158 0.00 0.00 0.00 4.61
370 378 3.721706 CTGGGGGTGGCAGAGGTC 61.722 72.222 0.00 0.00 0.00 3.85
375 383 4.083862 GGTGGCAGAGGTCCGGAC 62.084 72.222 27.04 27.04 0.00 4.79
376 384 4.436998 GTGGCAGAGGTCCGGACG 62.437 72.222 27.68 15.21 0.00 4.79
393 401 4.678743 GCCCGCAAACCTCCCCTT 62.679 66.667 0.00 0.00 0.00 3.95
394 402 2.361230 CCCGCAAACCTCCCCTTC 60.361 66.667 0.00 0.00 0.00 3.46
395 403 2.746277 CCGCAAACCTCCCCTTCG 60.746 66.667 0.00 0.00 0.00 3.79
396 404 2.032071 CGCAAACCTCCCCTTCGT 59.968 61.111 0.00 0.00 0.00 3.85
397 405 1.599797 CGCAAACCTCCCCTTCGTT 60.600 57.895 0.00 0.00 0.00 3.85
398 406 1.170290 CGCAAACCTCCCCTTCGTTT 61.170 55.000 0.00 0.00 0.00 3.60
399 407 1.037493 GCAAACCTCCCCTTCGTTTT 58.963 50.000 0.00 0.00 0.00 2.43
400 408 1.411246 GCAAACCTCCCCTTCGTTTTT 59.589 47.619 0.00 0.00 0.00 1.94
434 706 1.977056 AACTTTTGGACTTCCGGACC 58.023 50.000 1.83 2.29 39.43 4.46
443 715 0.841289 ACTTCCGGACCTGTTTGGAA 59.159 50.000 1.83 0.00 38.13 3.53
449 721 3.707102 TCCGGACCTGTTTGGAAAAATTT 59.293 39.130 0.00 0.00 39.71 1.82
456 728 5.045942 ACCTGTTTGGAAAAATTTGGTGACT 60.046 36.000 0.00 0.00 39.71 3.41
526 798 0.451783 GGTGATTTGGTGATCCGTGC 59.548 55.000 0.00 0.00 36.30 5.34
565 838 5.757808 GGTTGTGTATTTGTGCAATTTCCTT 59.242 36.000 0.00 0.00 0.00 3.36
570 843 6.701400 GTGTATTTGTGCAATTTCCTTCAACT 59.299 34.615 0.00 0.00 0.00 3.16
572 845 7.768120 TGTATTTGTGCAATTTCCTTCAACTTT 59.232 29.630 0.00 0.00 0.00 2.66
573 846 6.660887 TTTGTGCAATTTCCTTCAACTTTC 57.339 33.333 0.00 0.00 0.00 2.62
700 1314 5.240844 AGGTACACTGCCAATTAAGTCAAAC 59.759 40.000 0.00 0.00 0.00 2.93
722 1342 2.604969 TCGCGTGGAAAAAGTTATGC 57.395 45.000 5.77 0.00 0.00 3.14
814 1434 1.957668 ATGACTGCATCGCATTAGCA 58.042 45.000 0.00 0.00 42.27 3.49
830 1450 2.105128 CACAGCGACGGGATCCTC 59.895 66.667 12.58 0.76 0.00 3.71
929 1559 1.546834 CAGCCTCGCTACGTTAGTTC 58.453 55.000 0.00 0.00 36.40 3.01
940 1570 6.037940 TCGCTACGTTAGTTCTCAATCATAGT 59.962 38.462 0.00 0.00 0.00 2.12
942 1572 6.973474 GCTACGTTAGTTCTCAATCATAGTGT 59.027 38.462 0.00 0.00 0.00 3.55
947 1609 7.649705 CGTTAGTTCTCAATCATAGTGTGCTAT 59.350 37.037 0.00 0.00 38.38 2.97
957 1619 2.428544 AGTGTGCTATCCTCGAGTCT 57.571 50.000 12.31 0.12 0.00 3.24
990 1652 5.008811 GCTCCTACTCTAGCTTTGAATCGTA 59.991 44.000 0.00 0.00 35.80 3.43
991 1653 6.374565 TCCTACTCTAGCTTTGAATCGTAC 57.625 41.667 0.00 0.00 0.00 3.67
992 1654 5.298777 TCCTACTCTAGCTTTGAATCGTACC 59.701 44.000 0.00 0.00 0.00 3.34
993 1655 5.067413 CCTACTCTAGCTTTGAATCGTACCA 59.933 44.000 0.00 0.00 0.00 3.25
994 1656 5.599999 ACTCTAGCTTTGAATCGTACCAT 57.400 39.130 0.00 0.00 0.00 3.55
995 1657 5.593010 ACTCTAGCTTTGAATCGTACCATC 58.407 41.667 0.00 0.00 0.00 3.51
996 1658 4.607955 TCTAGCTTTGAATCGTACCATCG 58.392 43.478 0.00 0.00 0.00 3.84
1014 1676 1.906333 GACCATGGCCGTGGGTTTT 60.906 57.895 40.61 24.59 43.77 2.43
1020 1682 3.223589 GCCGTGGGTTTTGCTGGT 61.224 61.111 0.00 0.00 0.00 4.00
1021 1683 1.899534 GCCGTGGGTTTTGCTGGTA 60.900 57.895 0.00 0.00 0.00 3.25
1050 1712 2.786495 CGAGGACCAGCAGCGGTAT 61.786 63.158 8.65 2.06 40.22 2.73
1065 1727 2.039787 TATGGCGGGAGGGTCACA 59.960 61.111 0.00 0.00 0.00 3.58
1401 2063 4.767255 GTCAGCGGAGGGGCAGTG 62.767 72.222 0.00 0.00 34.64 3.66
1467 2129 1.674322 CGGGTTCGCCAATCAGGTT 60.674 57.895 0.00 0.00 40.61 3.50
1472 2134 2.554893 GGTTCGCCAATCAGGTTACAAA 59.445 45.455 0.00 0.00 40.61 2.83
1474 2136 4.321675 GGTTCGCCAATCAGGTTACAAAAT 60.322 41.667 0.00 0.00 40.61 1.82
1475 2137 5.227152 GTTCGCCAATCAGGTTACAAAATT 58.773 37.500 0.00 0.00 40.61 1.82
1476 2138 5.461032 TCGCCAATCAGGTTACAAAATTT 57.539 34.783 0.00 0.00 40.61 1.82
1477 2139 5.848406 TCGCCAATCAGGTTACAAAATTTT 58.152 33.333 0.00 0.00 40.61 1.82
1478 2140 6.284459 TCGCCAATCAGGTTACAAAATTTTT 58.716 32.000 0.00 0.00 40.61 1.94
1523 2185 8.842358 TTTTTAGGATCGTCATTAGTCAAGTT 57.158 30.769 0.00 0.00 0.00 2.66
1524 2186 9.932207 TTTTTAGGATCGTCATTAGTCAAGTTA 57.068 29.630 0.00 0.00 0.00 2.24
1525 2187 9.932207 TTTTAGGATCGTCATTAGTCAAGTTAA 57.068 29.630 0.00 0.00 0.00 2.01
1529 2191 9.530633 AGGATCGTCATTAGTCAAGTTAATTAC 57.469 33.333 0.00 0.00 0.00 1.89
1530 2192 9.530633 GGATCGTCATTAGTCAAGTTAATTACT 57.469 33.333 0.00 0.00 39.32 2.24
1564 2226 9.810870 TTTAAATAAGTGTGTGTTTATAGGGGT 57.189 29.630 0.00 0.00 0.00 4.95
1567 2229 9.457436 AAATAAGTGTGTGTTTATAGGGGTAAG 57.543 33.333 0.00 0.00 0.00 2.34
1568 2230 6.443995 AAGTGTGTGTTTATAGGGGTAAGT 57.556 37.500 0.00 0.00 0.00 2.24
1569 2231 7.557875 AAGTGTGTGTTTATAGGGGTAAGTA 57.442 36.000 0.00 0.00 0.00 2.24
1570 2232 7.744678 AGTGTGTGTTTATAGGGGTAAGTAT 57.255 36.000 0.00 0.00 0.00 2.12
1571 2233 8.843308 AGTGTGTGTTTATAGGGGTAAGTATA 57.157 34.615 0.00 0.00 0.00 1.47
1572 2234 9.443365 AGTGTGTGTTTATAGGGGTAAGTATAT 57.557 33.333 0.00 0.00 0.00 0.86
1575 2237 9.846248 GTGTGTTTATAGGGGTAAGTATATACG 57.154 37.037 7.23 0.00 0.00 3.06
1576 2238 8.522830 TGTGTTTATAGGGGTAAGTATATACGC 58.477 37.037 7.23 2.55 37.84 4.42
1577 2239 8.522830 GTGTTTATAGGGGTAAGTATATACGCA 58.477 37.037 7.23 0.00 39.68 5.24
1578 2240 9.258629 TGTTTATAGGGGTAAGTATATACGCAT 57.741 33.333 7.23 1.36 39.68 4.73
1581 2243 9.578576 TTATAGGGGTAAGTATATACGCATAGG 57.421 37.037 7.23 0.00 38.04 2.57
1582 2244 5.835582 AGGGGTAAGTATATACGCATAGGT 58.164 41.667 7.23 0.00 39.68 3.08
1583 2245 6.973642 AGGGGTAAGTATATACGCATAGGTA 58.026 40.000 7.23 0.00 39.68 3.08
1584 2246 7.589993 AGGGGTAAGTATATACGCATAGGTAT 58.410 38.462 7.23 0.00 39.68 2.73
1585 2247 8.727149 AGGGGTAAGTATATACGCATAGGTATA 58.273 37.037 7.23 0.00 39.68 1.47
1586 2248 9.354673 GGGGTAAGTATATACGCATAGGTATAA 57.645 37.037 7.23 0.00 38.47 0.98
1591 2253 8.618702 AGTATATACGCATAGGTATAATCGCT 57.381 34.615 7.23 0.00 38.47 4.93
1592 2254 9.064706 AGTATATACGCATAGGTATAATCGCTT 57.935 33.333 7.23 0.00 38.47 4.68
1593 2255 9.114965 GTATATACGCATAGGTATAATCGCTTG 57.885 37.037 0.00 0.00 38.47 4.01
1594 2256 2.993899 ACGCATAGGTATAATCGCTTGC 59.006 45.455 0.00 0.00 0.00 4.01
1595 2257 2.028045 CGCATAGGTATAATCGCTTGCG 59.972 50.000 8.87 8.87 44.39 4.85
1596 2258 2.993899 GCATAGGTATAATCGCTTGCGT 59.006 45.455 14.70 0.00 0.00 5.24
1597 2259 3.060895 GCATAGGTATAATCGCTTGCGTC 59.939 47.826 14.70 1.02 0.00 5.19
1598 2260 4.486090 CATAGGTATAATCGCTTGCGTCT 58.514 43.478 14.70 5.96 0.00 4.18
1599 2261 2.743938 AGGTATAATCGCTTGCGTCTG 58.256 47.619 14.70 0.00 0.00 3.51
1600 2262 2.100916 AGGTATAATCGCTTGCGTCTGT 59.899 45.455 14.70 4.61 0.00 3.41
1601 2263 3.317149 AGGTATAATCGCTTGCGTCTGTA 59.683 43.478 14.70 3.73 0.00 2.74
1602 2264 3.424529 GGTATAATCGCTTGCGTCTGTAC 59.575 47.826 14.70 13.63 0.00 2.90
1603 2265 1.917273 TAATCGCTTGCGTCTGTACC 58.083 50.000 14.70 0.00 0.00 3.34
1604 2266 1.076533 AATCGCTTGCGTCTGTACCG 61.077 55.000 14.70 0.00 0.00 4.02
1605 2267 2.209064 ATCGCTTGCGTCTGTACCGT 62.209 55.000 14.70 0.00 0.00 4.83
1606 2268 1.154169 CGCTTGCGTCTGTACCGTA 60.154 57.895 6.86 0.00 0.00 4.02
1607 2269 0.524816 CGCTTGCGTCTGTACCGTAT 60.525 55.000 6.86 0.00 0.00 3.06
1608 2270 1.636988 GCTTGCGTCTGTACCGTATT 58.363 50.000 0.00 0.00 0.00 1.89
1609 2271 1.997606 GCTTGCGTCTGTACCGTATTT 59.002 47.619 0.00 0.00 0.00 1.40
1610 2272 2.414138 GCTTGCGTCTGTACCGTATTTT 59.586 45.455 0.00 0.00 0.00 1.82
1611 2273 3.120442 GCTTGCGTCTGTACCGTATTTTT 60.120 43.478 0.00 0.00 0.00 1.94
1678 2340 9.840427 AAATCAGTGATACTTATTTTCAAACGG 57.160 29.630 5.94 0.00 30.30 4.44
1679 2341 8.786826 ATCAGTGATACTTATTTTCAAACGGA 57.213 30.769 3.05 0.00 0.00 4.69
1680 2342 8.251750 TCAGTGATACTTATTTTCAAACGGAG 57.748 34.615 0.00 0.00 0.00 4.63
1681 2343 8.092068 TCAGTGATACTTATTTTCAAACGGAGA 58.908 33.333 0.00 0.00 0.00 3.71
1682 2344 8.717821 CAGTGATACTTATTTTCAAACGGAGAA 58.282 33.333 0.00 0.00 0.00 2.87
1683 2345 9.280174 AGTGATACTTATTTTCAAACGGAGAAA 57.720 29.630 0.00 0.00 33.48 2.52
1725 2387 6.879400 AGGACTCTATTACAAATCTCACACC 58.121 40.000 0.00 0.00 0.00 4.16
1726 2388 6.440647 AGGACTCTATTACAAATCTCACACCA 59.559 38.462 0.00 0.00 0.00 4.17
1727 2389 6.758886 GGACTCTATTACAAATCTCACACCAG 59.241 42.308 0.00 0.00 0.00 4.00
1728 2390 7.363880 GGACTCTATTACAAATCTCACACCAGA 60.364 40.741 0.00 0.00 0.00 3.86
1729 2391 8.083828 ACTCTATTACAAATCTCACACCAGAT 57.916 34.615 0.00 0.00 34.34 2.90
1730 2392 8.543774 ACTCTATTACAAATCTCACACCAGATT 58.456 33.333 0.00 0.00 43.70 2.40
1732 2394 9.739276 TCTATTACAAATCTCACACCAGATTTT 57.261 29.630 5.82 2.41 46.57 1.82
1762 2424 8.351461 ACCATGGCAAATTAAACATTTTTGAAG 58.649 29.630 13.04 0.00 33.24 3.02
1802 2464 7.312899 ACTAAGGAAATCAAATTTAGTTGCCG 58.687 34.615 6.23 0.00 32.30 5.69
1803 2465 5.975693 AGGAAATCAAATTTAGTTGCCGA 57.024 34.783 6.23 0.00 31.47 5.54
1804 2466 5.954335 AGGAAATCAAATTTAGTTGCCGAG 58.046 37.500 6.23 0.00 31.47 4.63
1805 2467 4.562789 GGAAATCAAATTTAGTTGCCGAGC 59.437 41.667 0.00 0.00 31.47 5.03
1806 2468 4.782019 AATCAAATTTAGTTGCCGAGCA 57.218 36.364 0.00 0.00 36.47 4.26
1807 2469 4.989279 ATCAAATTTAGTTGCCGAGCAT 57.011 36.364 0.00 0.00 38.76 3.79
1808 2470 4.095410 TCAAATTTAGTTGCCGAGCATG 57.905 40.909 0.00 0.00 38.76 4.06
1809 2471 3.755905 TCAAATTTAGTTGCCGAGCATGA 59.244 39.130 0.00 0.00 38.76 3.07
1810 2472 3.764885 AATTTAGTTGCCGAGCATGAC 57.235 42.857 0.00 0.00 38.76 3.06
1811 2473 2.177394 TTTAGTTGCCGAGCATGACA 57.823 45.000 0.00 0.00 38.76 3.58
1812 2474 2.177394 TTAGTTGCCGAGCATGACAA 57.823 45.000 0.00 0.00 38.76 3.18
1813 2475 2.177394 TAGTTGCCGAGCATGACAAA 57.823 45.000 0.00 0.00 38.76 2.83
1814 2476 1.538047 AGTTGCCGAGCATGACAAAT 58.462 45.000 0.00 0.00 38.76 2.32
1815 2477 1.470098 AGTTGCCGAGCATGACAAATC 59.530 47.619 0.00 0.00 38.76 2.17
1816 2478 0.810648 TTGCCGAGCATGACAAATCC 59.189 50.000 0.00 0.00 38.76 3.01
1817 2479 1.353103 GCCGAGCATGACAAATCCG 59.647 57.895 0.00 0.00 0.00 4.18
1818 2480 1.369091 GCCGAGCATGACAAATCCGT 61.369 55.000 0.00 0.00 0.00 4.69
1819 2481 0.652592 CCGAGCATGACAAATCCGTC 59.347 55.000 0.00 0.00 36.40 4.79
1820 2482 1.645034 CGAGCATGACAAATCCGTCT 58.355 50.000 0.00 0.00 36.82 4.18
1821 2483 1.590238 CGAGCATGACAAATCCGTCTC 59.410 52.381 0.00 0.00 36.82 3.36
1822 2484 2.621338 GAGCATGACAAATCCGTCTCA 58.379 47.619 0.00 0.00 36.82 3.27
1823 2485 3.201290 GAGCATGACAAATCCGTCTCAT 58.799 45.455 0.00 0.00 36.82 2.90
1824 2486 3.614092 AGCATGACAAATCCGTCTCATT 58.386 40.909 0.00 0.00 36.82 2.57
1825 2487 4.012374 AGCATGACAAATCCGTCTCATTT 58.988 39.130 0.00 0.00 36.82 2.32
1826 2488 4.460382 AGCATGACAAATCCGTCTCATTTT 59.540 37.500 0.00 0.00 36.82 1.82
1827 2489 5.647658 AGCATGACAAATCCGTCTCATTTTA 59.352 36.000 0.00 0.00 36.82 1.52
1828 2490 6.319658 AGCATGACAAATCCGTCTCATTTTAT 59.680 34.615 0.00 0.00 36.82 1.40
1829 2491 6.974622 GCATGACAAATCCGTCTCATTTTATT 59.025 34.615 0.00 0.00 36.82 1.40
1830 2492 7.489113 GCATGACAAATCCGTCTCATTTTATTT 59.511 33.333 0.00 0.00 36.82 1.40
1831 2493 9.357652 CATGACAAATCCGTCTCATTTTATTTT 57.642 29.630 0.00 0.00 36.82 1.82
1832 2494 8.964420 TGACAAATCCGTCTCATTTTATTTTC 57.036 30.769 0.00 0.00 36.82 2.29
1833 2495 8.792633 TGACAAATCCGTCTCATTTTATTTTCT 58.207 29.630 0.00 0.00 36.82 2.52
1834 2496 8.970691 ACAAATCCGTCTCATTTTATTTTCTG 57.029 30.769 0.00 0.00 0.00 3.02
1835 2497 8.792633 ACAAATCCGTCTCATTTTATTTTCTGA 58.207 29.630 0.00 0.00 0.00 3.27
1836 2498 9.793252 CAAATCCGTCTCATTTTATTTTCTGAT 57.207 29.630 0.00 0.00 0.00 2.90
1840 2502 9.884636 TCCGTCTCATTTTATTTTCTGATAGAA 57.115 29.630 0.00 0.00 31.28 2.10
1852 2514 4.355543 TCTGATAGAAAAATTGCCGTGC 57.644 40.909 0.00 0.00 0.00 5.34
1853 2515 4.009675 TCTGATAGAAAAATTGCCGTGCT 58.990 39.130 0.00 0.00 0.00 4.40
1854 2516 4.458989 TCTGATAGAAAAATTGCCGTGCTT 59.541 37.500 0.00 0.00 0.00 3.91
1855 2517 4.484236 TGATAGAAAAATTGCCGTGCTTG 58.516 39.130 0.00 0.00 0.00 4.01
1856 2518 4.217334 TGATAGAAAAATTGCCGTGCTTGA 59.783 37.500 0.00 0.00 0.00 3.02
1857 2519 3.451141 AGAAAAATTGCCGTGCTTGAA 57.549 38.095 0.00 0.00 0.00 2.69
1858 2520 3.791245 AGAAAAATTGCCGTGCTTGAAA 58.209 36.364 0.00 0.00 0.00 2.69
1859 2521 3.555547 AGAAAAATTGCCGTGCTTGAAAC 59.444 39.130 0.00 0.00 0.00 2.78
1860 2522 2.888834 AAATTGCCGTGCTTGAAACT 57.111 40.000 0.00 0.00 0.00 2.66
1861 2523 4.314740 AAAATTGCCGTGCTTGAAACTA 57.685 36.364 0.00 0.00 0.00 2.24
1862 2524 4.314740 AAATTGCCGTGCTTGAAACTAA 57.685 36.364 0.00 0.00 0.00 2.24
1863 2525 4.314740 AATTGCCGTGCTTGAAACTAAA 57.685 36.364 0.00 0.00 0.00 1.85
1864 2526 4.519540 ATTGCCGTGCTTGAAACTAAAT 57.480 36.364 0.00 0.00 0.00 1.40
1865 2527 4.314740 TTGCCGTGCTTGAAACTAAATT 57.685 36.364 0.00 0.00 0.00 1.82
1866 2528 4.314740 TGCCGTGCTTGAAACTAAATTT 57.685 36.364 0.00 0.00 0.00 1.82
1867 2529 4.047822 TGCCGTGCTTGAAACTAAATTTG 58.952 39.130 0.00 0.00 0.00 2.32
1868 2530 4.048504 GCCGTGCTTGAAACTAAATTTGT 58.951 39.130 0.00 0.00 0.00 2.83
1869 2531 4.148174 GCCGTGCTTGAAACTAAATTTGTC 59.852 41.667 0.00 0.00 0.00 3.18
1870 2532 5.277825 CCGTGCTTGAAACTAAATTTGTCA 58.722 37.500 0.00 0.00 0.00 3.58
1871 2533 5.920273 CCGTGCTTGAAACTAAATTTGTCAT 59.080 36.000 0.00 0.00 0.00 3.06
1872 2534 6.088085 CCGTGCTTGAAACTAAATTTGTCATC 59.912 38.462 0.00 1.51 0.00 2.92
1873 2535 6.636447 CGTGCTTGAAACTAAATTTGTCATCA 59.364 34.615 0.00 3.76 0.00 3.07
1874 2536 7.357532 CGTGCTTGAAACTAAATTTGTCATCAC 60.358 37.037 0.00 8.89 0.00 3.06
1875 2537 6.922957 TGCTTGAAACTAAATTTGTCATCACC 59.077 34.615 0.00 2.16 0.00 4.02
1876 2538 6.922957 GCTTGAAACTAAATTTGTCATCACCA 59.077 34.615 0.00 0.00 0.00 4.17
1877 2539 7.599998 GCTTGAAACTAAATTTGTCATCACCAT 59.400 33.333 0.00 0.00 0.00 3.55
1878 2540 8.815141 TTGAAACTAAATTTGTCATCACCATG 57.185 30.769 0.00 0.00 0.00 3.66
1879 2541 6.867816 TGAAACTAAATTTGTCATCACCATGC 59.132 34.615 0.00 0.00 0.00 4.06
1880 2542 6.594788 AACTAAATTTGTCATCACCATGCT 57.405 33.333 0.00 0.00 0.00 3.79
1881 2543 7.701539 AACTAAATTTGTCATCACCATGCTA 57.298 32.000 0.00 0.00 0.00 3.49
1882 2544 7.701539 ACTAAATTTGTCATCACCATGCTAA 57.298 32.000 0.00 0.00 0.00 3.09
1883 2545 8.297470 ACTAAATTTGTCATCACCATGCTAAT 57.703 30.769 0.00 0.00 0.00 1.73
1884 2546 9.407380 ACTAAATTTGTCATCACCATGCTAATA 57.593 29.630 0.00 0.00 0.00 0.98
1885 2547 9.669353 CTAAATTTGTCATCACCATGCTAATAC 57.331 33.333 0.00 0.00 0.00 1.89
1886 2548 7.643569 AATTTGTCATCACCATGCTAATACA 57.356 32.000 0.00 0.00 0.00 2.29
1887 2549 7.643569 ATTTGTCATCACCATGCTAATACAA 57.356 32.000 0.00 0.00 0.00 2.41
1888 2550 7.459795 TTTGTCATCACCATGCTAATACAAA 57.540 32.000 0.00 0.00 32.99 2.83
1889 2551 7.643569 TTGTCATCACCATGCTAATACAAAT 57.356 32.000 0.00 0.00 0.00 2.32
1890 2552 7.643569 TGTCATCACCATGCTAATACAAATT 57.356 32.000 0.00 0.00 0.00 1.82
1891 2553 7.482474 TGTCATCACCATGCTAATACAAATTG 58.518 34.615 0.00 0.00 0.00 2.32
1892 2554 6.418819 GTCATCACCATGCTAATACAAATTGC 59.581 38.462 0.00 0.00 0.00 3.56
1893 2555 5.261209 TCACCATGCTAATACAAATTGCC 57.739 39.130 0.00 0.00 0.00 4.52
1894 2556 4.708909 TCACCATGCTAATACAAATTGCCA 59.291 37.500 0.00 0.00 0.00 4.92
1895 2557 5.363292 TCACCATGCTAATACAAATTGCCAT 59.637 36.000 0.00 0.00 0.00 4.40
1896 2558 5.464057 CACCATGCTAATACAAATTGCCATG 59.536 40.000 0.00 0.00 36.11 3.66
1897 2559 5.363292 ACCATGCTAATACAAATTGCCATGA 59.637 36.000 0.00 0.00 37.22 3.07
1898 2560 6.127111 ACCATGCTAATACAAATTGCCATGAA 60.127 34.615 0.00 0.00 37.22 2.57
1899 2561 6.422701 CCATGCTAATACAAATTGCCATGAAG 59.577 38.462 0.00 0.00 37.22 3.02
1900 2562 6.772360 TGCTAATACAAATTGCCATGAAGA 57.228 33.333 0.00 0.00 0.00 2.87
1901 2563 7.167924 TGCTAATACAAATTGCCATGAAGAA 57.832 32.000 0.00 0.00 0.00 2.52
1902 2564 7.035004 TGCTAATACAAATTGCCATGAAGAAC 58.965 34.615 0.00 0.00 0.00 3.01
1903 2565 6.197096 GCTAATACAAATTGCCATGAAGAACG 59.803 38.462 0.00 0.00 0.00 3.95
1904 2566 5.643379 ATACAAATTGCCATGAAGAACGT 57.357 34.783 0.00 0.00 0.00 3.99
1905 2567 3.900941 ACAAATTGCCATGAAGAACGTC 58.099 40.909 0.00 0.00 0.00 4.34
1906 2568 3.317711 ACAAATTGCCATGAAGAACGTCA 59.682 39.130 0.00 0.00 0.00 4.35
1907 2569 3.837213 AATTGCCATGAAGAACGTCAG 57.163 42.857 0.00 0.00 0.00 3.51
1908 2570 2.542020 TTGCCATGAAGAACGTCAGA 57.458 45.000 0.00 0.00 0.00 3.27
1909 2571 2.768253 TGCCATGAAGAACGTCAGAT 57.232 45.000 0.00 0.00 0.00 2.90
1910 2572 2.349590 TGCCATGAAGAACGTCAGATG 58.650 47.619 0.00 0.00 0.00 2.90
1911 2573 2.289631 TGCCATGAAGAACGTCAGATGT 60.290 45.455 0.00 0.00 0.00 3.06
1912 2574 2.094894 GCCATGAAGAACGTCAGATGTG 59.905 50.000 0.00 0.00 0.00 3.21
1913 2575 2.094894 CCATGAAGAACGTCAGATGTGC 59.905 50.000 0.00 0.00 0.00 4.57
1914 2576 1.795768 TGAAGAACGTCAGATGTGCC 58.204 50.000 0.00 0.00 0.00 5.01
1915 2577 1.344438 TGAAGAACGTCAGATGTGCCT 59.656 47.619 0.00 0.00 0.00 4.75
1916 2578 2.560981 TGAAGAACGTCAGATGTGCCTA 59.439 45.455 0.00 0.00 0.00 3.93
1917 2579 3.006430 TGAAGAACGTCAGATGTGCCTAA 59.994 43.478 0.00 0.00 0.00 2.69
1918 2580 3.678056 AGAACGTCAGATGTGCCTAAA 57.322 42.857 0.00 0.00 0.00 1.85
1919 2581 4.002906 AGAACGTCAGATGTGCCTAAAA 57.997 40.909 0.00 0.00 0.00 1.52
1920 2582 4.385825 AGAACGTCAGATGTGCCTAAAAA 58.614 39.130 0.00 0.00 0.00 1.94
1921 2583 5.003804 AGAACGTCAGATGTGCCTAAAAAT 58.996 37.500 0.00 0.00 0.00 1.82
1922 2584 4.946784 ACGTCAGATGTGCCTAAAAATC 57.053 40.909 0.00 0.00 0.00 2.17
1923 2585 4.579869 ACGTCAGATGTGCCTAAAAATCT 58.420 39.130 0.00 0.00 0.00 2.40
1924 2586 4.393062 ACGTCAGATGTGCCTAAAAATCTG 59.607 41.667 5.37 5.37 44.81 2.90
1927 2589 4.631377 TCAGATGTGCCTAAAAATCTGACG 59.369 41.667 9.53 0.00 46.22 4.35
1928 2590 4.393062 CAGATGTGCCTAAAAATCTGACGT 59.607 41.667 5.75 0.00 45.81 4.34
1929 2591 4.631813 AGATGTGCCTAAAAATCTGACGTC 59.368 41.667 9.11 9.11 0.00 4.34
1930 2592 3.734463 TGTGCCTAAAAATCTGACGTCA 58.266 40.909 18.88 18.88 0.00 4.35
1931 2593 4.323417 TGTGCCTAAAAATCTGACGTCAT 58.677 39.130 20.40 5.43 0.00 3.06
1932 2594 5.483811 TGTGCCTAAAAATCTGACGTCATA 58.516 37.500 20.40 12.98 0.00 2.15
1933 2595 6.112734 TGTGCCTAAAAATCTGACGTCATAT 58.887 36.000 20.40 14.94 0.00 1.78
1934 2596 6.597672 TGTGCCTAAAAATCTGACGTCATATT 59.402 34.615 20.40 20.17 0.00 1.28
1935 2597 7.120579 TGTGCCTAAAAATCTGACGTCATATTT 59.879 33.333 27.04 27.04 35.17 1.40
1936 2598 7.968405 GTGCCTAAAAATCTGACGTCATATTTT 59.032 33.333 32.41 32.41 41.39 1.82
1937 2599 8.519526 TGCCTAAAAATCTGACGTCATATTTTT 58.480 29.630 39.62 39.62 45.75 1.94
1994 2656 0.320771 CAGTGCCACTGTACCTGTCC 60.321 60.000 16.78 0.00 41.19 4.02
2042 2704 1.028905 CCTTCAGCAACGGTTTCCAA 58.971 50.000 0.00 0.00 0.00 3.53
2060 2722 0.107945 AATTCAGCCTCTGTCTCGGC 60.108 55.000 0.00 0.00 46.65 5.54
2181 2843 4.514577 CCGTCGGCGCCATCTTCT 62.515 66.667 28.98 0.00 36.67 2.85
2207 2869 4.250305 ACGCCCAACAGCCTCGTT 62.250 61.111 0.00 0.00 0.00 3.85
2216 2878 2.037136 CAGCCTCGTTCAGCAAGGG 61.037 63.158 0.00 0.00 0.00 3.95
2255 2917 0.253044 AGGCGCTGCTCCAAAAGATA 59.747 50.000 11.76 0.00 0.00 1.98
2262 2924 2.611292 CTGCTCCAAAAGATAAGAGGCG 59.389 50.000 0.00 0.00 0.00 5.52
2357 3019 3.260483 CTCATCCTGTCGCAGCGC 61.260 66.667 10.87 0.00 0.00 5.92
2390 3052 3.136123 CTTGCCATGGCCGTCCTG 61.136 66.667 33.44 12.96 41.09 3.86
2426 3088 2.579201 CTCACCGGGATCAACGCT 59.421 61.111 6.32 0.00 0.00 5.07
2477 3139 0.463295 CCATTGGCATGAGCGAGAGT 60.463 55.000 0.00 0.00 43.41 3.24
2483 3145 3.763356 ATGAGCGAGAGTGCGGCA 61.763 61.111 0.00 0.00 40.67 5.69
2489 3151 3.117171 GAGAGTGCGGCACTGCTG 61.117 66.667 37.72 5.38 45.44 4.41
2698 3360 2.293677 TCGTCCTAATCTTCCTCATCGC 59.706 50.000 0.00 0.00 0.00 4.58
2700 3362 2.365617 GTCCTAATCTTCCTCATCGCCA 59.634 50.000 0.00 0.00 0.00 5.69
2756 3418 0.684479 TCAGCTGGCTGATACCGAGT 60.684 55.000 19.66 0.00 46.80 4.18
2894 3556 1.070758 TGGCTGTTCTTCTTCTTCGCT 59.929 47.619 0.00 0.00 0.00 4.93
2897 3559 1.462670 CTGTTCTTCTTCTTCGCTGGC 59.537 52.381 0.00 0.00 0.00 4.85
2954 3616 3.108288 GCCGGAGACCAAGGGGATC 62.108 68.421 5.05 0.00 38.05 3.36
3020 3682 1.059913 AGAGAGTTGTGGGGGTTGAG 58.940 55.000 0.00 0.00 0.00 3.02
3027 3689 1.358152 TGTGGGGGTTGAGGAAGTAG 58.642 55.000 0.00 0.00 0.00 2.57
3046 3708 1.085091 GACGACGGTCAGAAGCTCTA 58.915 55.000 9.10 0.00 42.91 2.43
3068 3730 7.054124 TCTAAAGCTTCTTCCACTTTCTTTCA 58.946 34.615 0.00 0.00 35.38 2.69
3069 3731 5.764487 AAGCTTCTTCCACTTTCTTTCAG 57.236 39.130 0.00 0.00 0.00 3.02
3070 3732 5.041191 AGCTTCTTCCACTTTCTTTCAGA 57.959 39.130 0.00 0.00 0.00 3.27
3071 3733 5.062528 AGCTTCTTCCACTTTCTTTCAGAG 58.937 41.667 0.00 0.00 0.00 3.35
3072 3734 5.059833 GCTTCTTCCACTTTCTTTCAGAGA 58.940 41.667 0.00 0.00 0.00 3.10
3073 3735 5.529060 GCTTCTTCCACTTTCTTTCAGAGAA 59.471 40.000 0.00 0.00 42.56 2.87
3074 3736 6.293353 GCTTCTTCCACTTTCTTTCAGAGAAG 60.293 42.308 0.00 0.00 44.80 2.85
3075 3737 6.485830 TCTTCCACTTTCTTTCAGAGAAGA 57.514 37.500 0.00 0.00 44.80 2.87
3076 3738 6.520272 TCTTCCACTTTCTTTCAGAGAAGAG 58.480 40.000 0.00 0.00 44.80 2.85
3077 3739 6.325028 TCTTCCACTTTCTTTCAGAGAAGAGA 59.675 38.462 0.00 0.00 44.80 3.10
3078 3740 6.485830 TCCACTTTCTTTCAGAGAAGAGAA 57.514 37.500 0.00 0.00 44.80 2.87
3079 3741 6.889198 TCCACTTTCTTTCAGAGAAGAGAAA 58.111 36.000 12.23 12.23 44.80 2.52
3088 3750 5.896073 TCAGAGAAGAGAAAGAAAAGGGT 57.104 39.130 0.00 0.00 0.00 4.34
3089 3751 5.615289 TCAGAGAAGAGAAAGAAAAGGGTG 58.385 41.667 0.00 0.00 0.00 4.61
3090 3752 5.366768 TCAGAGAAGAGAAAGAAAAGGGTGA 59.633 40.000 0.00 0.00 0.00 4.02
3091 3753 6.058183 CAGAGAAGAGAAAGAAAAGGGTGAA 58.942 40.000 0.00 0.00 0.00 3.18
3092 3754 6.204495 CAGAGAAGAGAAAGAAAAGGGTGAAG 59.796 42.308 0.00 0.00 0.00 3.02
3093 3755 4.824537 AGAAGAGAAAGAAAAGGGTGAAGC 59.175 41.667 0.00 0.00 0.00 3.86
3094 3756 3.491342 AGAGAAAGAAAAGGGTGAAGCC 58.509 45.455 0.00 0.00 0.00 4.35
3095 3757 3.139211 AGAGAAAGAAAAGGGTGAAGCCT 59.861 43.478 0.00 0.00 37.43 4.58
3096 3758 3.891977 GAGAAAGAAAAGGGTGAAGCCTT 59.108 43.478 7.98 7.98 37.43 4.35
3097 3759 5.061721 AGAAAGAAAAGGGTGAAGCCTTA 57.938 39.130 13.89 0.00 37.43 2.69
3098 3760 5.645201 AGAAAGAAAAGGGTGAAGCCTTAT 58.355 37.500 13.89 1.64 37.43 1.73
3099 3761 6.077993 AGAAAGAAAAGGGTGAAGCCTTATT 58.922 36.000 13.89 10.31 37.43 1.40
3100 3762 5.984695 AAGAAAAGGGTGAAGCCTTATTC 57.015 39.130 13.89 16.75 37.43 1.75
3101 3763 4.010349 AGAAAAGGGTGAAGCCTTATTCG 58.990 43.478 13.89 0.00 37.43 3.34
3102 3764 3.713826 AAAGGGTGAAGCCTTATTCGA 57.286 42.857 13.89 0.00 37.43 3.71
3103 3765 3.933861 AAGGGTGAAGCCTTATTCGAT 57.066 42.857 12.01 0.00 37.43 3.59
3104 3766 3.933861 AGGGTGAAGCCTTATTCGATT 57.066 42.857 0.00 0.00 37.43 3.34
3105 3767 3.809905 AGGGTGAAGCCTTATTCGATTC 58.190 45.455 0.00 0.00 37.43 2.52
3106 3768 3.199946 AGGGTGAAGCCTTATTCGATTCA 59.800 43.478 0.00 0.00 37.43 2.57
3107 3769 3.561725 GGGTGAAGCCTTATTCGATTCAG 59.438 47.826 0.00 0.00 37.43 3.02
3108 3770 4.442706 GGTGAAGCCTTATTCGATTCAGA 58.557 43.478 0.00 0.00 30.99 3.27
3109 3771 4.509600 GGTGAAGCCTTATTCGATTCAGAG 59.490 45.833 0.00 0.00 30.99 3.35
3110 3772 4.509600 GTGAAGCCTTATTCGATTCAGAGG 59.490 45.833 0.00 0.00 30.99 3.69
3111 3773 3.760580 AGCCTTATTCGATTCAGAGGG 57.239 47.619 0.00 0.00 0.00 4.30
3112 3774 3.041946 AGCCTTATTCGATTCAGAGGGT 58.958 45.455 0.00 0.00 0.00 4.34
3113 3775 3.456277 AGCCTTATTCGATTCAGAGGGTT 59.544 43.478 0.00 0.00 31.47 4.11
3114 3776 4.080299 AGCCTTATTCGATTCAGAGGGTTT 60.080 41.667 0.00 0.00 31.47 3.27
3115 3777 4.273724 GCCTTATTCGATTCAGAGGGTTTC 59.726 45.833 0.00 0.00 0.00 2.78
3116 3778 5.428253 CCTTATTCGATTCAGAGGGTTTCA 58.572 41.667 0.00 0.00 0.00 2.69
3117 3779 5.880332 CCTTATTCGATTCAGAGGGTTTCAA 59.120 40.000 0.00 0.00 0.00 2.69
3118 3780 6.374333 CCTTATTCGATTCAGAGGGTTTCAAA 59.626 38.462 0.00 0.00 0.00 2.69
3119 3781 5.886960 ATTCGATTCAGAGGGTTTCAAAG 57.113 39.130 0.00 0.00 0.00 2.77
3120 3782 4.351874 TCGATTCAGAGGGTTTCAAAGT 57.648 40.909 0.00 0.00 0.00 2.66
3121 3783 4.065088 TCGATTCAGAGGGTTTCAAAGTG 58.935 43.478 0.00 0.00 0.00 3.16
3122 3784 3.189287 CGATTCAGAGGGTTTCAAAGTGG 59.811 47.826 0.00 0.00 0.00 4.00
3123 3785 3.943671 TTCAGAGGGTTTCAAAGTGGA 57.056 42.857 0.00 0.00 0.00 4.02
3124 3786 4.453480 TTCAGAGGGTTTCAAAGTGGAT 57.547 40.909 0.00 0.00 0.00 3.41
3125 3787 4.021102 TCAGAGGGTTTCAAAGTGGATC 57.979 45.455 0.00 0.00 0.00 3.36
3126 3788 2.744202 CAGAGGGTTTCAAAGTGGATCG 59.256 50.000 0.00 0.00 0.00 3.69
3127 3789 2.637872 AGAGGGTTTCAAAGTGGATCGA 59.362 45.455 0.00 0.00 0.00 3.59
3128 3790 3.072476 AGAGGGTTTCAAAGTGGATCGAA 59.928 43.478 0.00 0.00 0.00 3.71
3129 3791 3.818773 GAGGGTTTCAAAGTGGATCGAAA 59.181 43.478 0.00 0.00 0.00 3.46
3130 3792 4.211920 AGGGTTTCAAAGTGGATCGAAAA 58.788 39.130 0.00 0.00 0.00 2.29
3131 3793 4.278419 AGGGTTTCAAAGTGGATCGAAAAG 59.722 41.667 0.00 0.00 0.00 2.27
3132 3794 4.546570 GGTTTCAAAGTGGATCGAAAAGG 58.453 43.478 0.00 0.00 0.00 3.11
3133 3795 4.546570 GTTTCAAAGTGGATCGAAAAGGG 58.453 43.478 0.00 0.00 0.00 3.95
3134 3796 3.502123 TCAAAGTGGATCGAAAAGGGT 57.498 42.857 0.00 0.00 0.00 4.34
3135 3797 3.146066 TCAAAGTGGATCGAAAAGGGTG 58.854 45.455 0.00 0.00 0.00 4.61
3136 3798 2.200373 AAGTGGATCGAAAAGGGTGG 57.800 50.000 0.00 0.00 0.00 4.61
3137 3799 1.358152 AGTGGATCGAAAAGGGTGGA 58.642 50.000 0.00 0.00 0.00 4.02
3138 3800 1.279271 AGTGGATCGAAAAGGGTGGAG 59.721 52.381 0.00 0.00 0.00 3.86
3139 3801 0.035439 TGGATCGAAAAGGGTGGAGC 60.035 55.000 0.00 0.00 0.00 4.70
3140 3802 0.748367 GGATCGAAAAGGGTGGAGCC 60.748 60.000 0.00 0.00 0.00 4.70
3141 3803 0.253327 GATCGAAAAGGGTGGAGCCT 59.747 55.000 0.00 0.00 37.43 4.58
3142 3804 0.035056 ATCGAAAAGGGTGGAGCCTG 60.035 55.000 0.00 0.00 37.43 4.85
3161 3823 3.131046 CCTGATTACAAGATGGCAAACCC 59.869 47.826 0.00 0.00 33.59 4.11
3211 3873 5.540719 GTGGGCCTAGTCTGAACTATTCTAT 59.459 44.000 4.53 0.00 37.36 1.98
3253 3915 5.385198 TGCTCTTGTTTGGACCTTAGAAAT 58.615 37.500 0.00 0.00 0.00 2.17
3533 4195 6.754675 TGCATGATGCTGAATTTAAAGATGTG 59.245 34.615 19.19 0.00 45.31 3.21
3542 4204 7.358683 GCTGAATTTAAAGATGTGTTGCAGAAC 60.359 37.037 0.00 0.00 0.00 3.01
3636 4298 1.215647 CCAGCTAGCTCCGTTCGTT 59.784 57.895 16.15 0.00 0.00 3.85
3639 4301 1.126846 CAGCTAGCTCCGTTCGTTTTG 59.873 52.381 16.15 0.00 0.00 2.44
3832 4494 7.465960 TCATGGTTTATATATGCCTTTGCCTA 58.534 34.615 0.00 0.00 36.33 3.93
3894 4556 6.784176 TGTTTTAGGTTTACCTCGAACAAAC 58.216 36.000 19.41 14.80 44.77 2.93
3907 4569 2.817839 CGAACAAACAAGGGGAGGGATT 60.818 50.000 0.00 0.00 0.00 3.01
4000 4662 5.691305 GCTGTTAATGTTGCTGATTTGTTCA 59.309 36.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 2.097036 ACCATGTCCGAGACGATACAA 58.903 47.619 0.00 0.00 34.95 2.41
55 56 8.772250 TCATAGGAAGATGAGGTCAGTTTAAAT 58.228 33.333 0.00 0.00 32.05 1.40
58 59 7.921041 ATCATAGGAAGATGAGGTCAGTTTA 57.079 36.000 0.00 0.00 39.18 2.01
75 76 6.064060 TCATAAAGGTGGCTTGAATCATAGG 58.936 40.000 0.00 0.00 0.00 2.57
76 77 7.360691 CGATCATAAAGGTGGCTTGAATCATAG 60.361 40.741 0.00 0.00 0.00 2.23
81 82 4.336433 CACGATCATAAAGGTGGCTTGAAT 59.664 41.667 0.00 0.00 0.00 2.57
108 110 2.114616 AGGGAGGCATGACACTTAGAG 58.885 52.381 0.00 0.00 0.00 2.43
110 112 1.556911 ACAGGGAGGCATGACACTTAG 59.443 52.381 0.00 0.00 0.00 2.18
112 114 0.773644 AACAGGGAGGCATGACACTT 59.226 50.000 0.00 0.00 0.00 3.16
174 182 3.576078 AGTGACATTGTCCTTGGAACA 57.424 42.857 14.05 0.00 0.00 3.18
179 187 4.271696 TGGAGTAGTGACATTGTCCTTG 57.728 45.455 14.05 0.00 0.00 3.61
180 188 4.382040 CGATGGAGTAGTGACATTGTCCTT 60.382 45.833 14.05 5.06 0.00 3.36
190 198 1.207089 CAAAGGCCGATGGAGTAGTGA 59.793 52.381 0.00 0.00 0.00 3.41
193 201 0.107703 TGCAAAGGCCGATGGAGTAG 60.108 55.000 12.02 0.00 40.13 2.57
224 232 1.734477 CAGACCAGACGTTCGCCTG 60.734 63.158 1.79 1.79 0.00 4.85
229 237 1.733399 GTCGGCAGACCAGACGTTC 60.733 63.158 5.60 0.00 41.80 3.95
230 238 1.816863 ATGTCGGCAGACCAGACGTT 61.817 55.000 14.62 0.00 46.51 3.99
244 252 0.392863 TCCCACCTGCATTCATGTCG 60.393 55.000 0.00 0.00 0.00 4.35
267 275 4.962836 ACGTGACCGGACGGGACT 62.963 66.667 18.63 0.00 43.84 3.85
290 298 1.073964 CACTGCATTCTGTCGGTCAG 58.926 55.000 0.00 0.00 44.85 3.51
296 304 0.874390 TTTCCGCACTGCATTCTGTC 59.126 50.000 1.11 0.00 0.00 3.51
301 309 2.562912 CGCTTTCCGCACTGCATT 59.437 55.556 1.11 0.00 39.08 3.56
321 329 2.431942 CCTTTCCCGTCGTGTCCG 60.432 66.667 0.00 0.00 0.00 4.79
326 334 0.471191 AAAACCTCCTTTCCCGTCGT 59.529 50.000 0.00 0.00 0.00 4.34
329 337 1.064240 ACACAAAACCTCCTTTCCCGT 60.064 47.619 0.00 0.00 0.00 5.28
332 340 1.607148 CCGACACAAAACCTCCTTTCC 59.393 52.381 0.00 0.00 0.00 3.13
335 343 0.182775 AGCCGACACAAAACCTCCTT 59.817 50.000 0.00 0.00 0.00 3.36
339 347 1.528309 CCCAGCCGACACAAAACCT 60.528 57.895 0.00 0.00 0.00 3.50
353 361 3.721706 GACCTCTGCCACCCCCAG 61.722 72.222 0.00 0.00 0.00 4.45
358 366 4.083862 GTCCGGACCTCTGCCACC 62.084 72.222 24.75 0.00 0.00 4.61
359 367 4.436998 CGTCCGGACCTCTGCCAC 62.437 72.222 28.52 1.12 0.00 5.01
376 384 4.678743 AAGGGGAGGTTTGCGGGC 62.679 66.667 0.00 0.00 0.00 6.13
377 385 2.361230 GAAGGGGAGGTTTGCGGG 60.361 66.667 0.00 0.00 0.00 6.13
378 386 2.746277 CGAAGGGGAGGTTTGCGG 60.746 66.667 0.00 0.00 0.00 5.69
379 387 1.170290 AAACGAAGGGGAGGTTTGCG 61.170 55.000 0.00 0.00 33.01 4.85
380 388 1.037493 AAAACGAAGGGGAGGTTTGC 58.963 50.000 0.00 0.00 34.38 3.68
403 411 8.680001 GGAAGTCCAAAAGTTTACAAACTAGAA 58.320 33.333 7.73 0.00 41.10 2.10
404 412 7.011669 CGGAAGTCCAAAAGTTTACAAACTAGA 59.988 37.037 7.73 1.44 41.33 2.43
405 413 7.130269 CGGAAGTCCAAAAGTTTACAAACTAG 58.870 38.462 7.73 2.32 41.33 2.57
406 414 6.038492 CCGGAAGTCCAAAAGTTTACAAACTA 59.962 38.462 7.73 0.00 41.33 2.24
407 415 5.163591 CCGGAAGTCCAAAAGTTTACAAACT 60.164 40.000 0.00 1.47 42.86 2.66
408 416 5.038683 CCGGAAGTCCAAAAGTTTACAAAC 58.961 41.667 0.00 0.00 36.01 2.93
409 417 4.948621 TCCGGAAGTCCAAAAGTTTACAAA 59.051 37.500 0.00 0.00 35.14 2.83
410 418 4.336153 GTCCGGAAGTCCAAAAGTTTACAA 59.664 41.667 5.23 0.00 35.14 2.41
411 419 3.878699 GTCCGGAAGTCCAAAAGTTTACA 59.121 43.478 5.23 0.00 35.14 2.41
412 420 3.251729 GGTCCGGAAGTCCAAAAGTTTAC 59.748 47.826 5.23 0.00 35.14 2.01
413 421 3.136992 AGGTCCGGAAGTCCAAAAGTTTA 59.863 43.478 5.23 0.00 35.14 2.01
414 422 2.092049 AGGTCCGGAAGTCCAAAAGTTT 60.092 45.455 5.23 0.00 35.14 2.66
417 689 1.202770 ACAGGTCCGGAAGTCCAAAAG 60.203 52.381 5.23 0.00 35.14 2.27
434 706 5.220643 GCAGTCACCAAATTTTTCCAAACAG 60.221 40.000 0.00 0.00 0.00 3.16
443 715 2.482839 CCAACGGCAGTCACCAAATTTT 60.483 45.455 0.00 0.00 0.00 1.82
449 721 1.302431 CATCCAACGGCAGTCACCA 60.302 57.895 0.00 0.00 0.00 4.17
476 748 8.958119 ATGTCTAAACCGTACATATCAAACAT 57.042 30.769 0.00 0.00 32.21 2.71
477 749 8.780846 AATGTCTAAACCGTACATATCAAACA 57.219 30.769 0.00 0.00 33.59 2.83
480 752 9.537192 CCTAAATGTCTAAACCGTACATATCAA 57.463 33.333 0.00 0.00 33.59 2.57
481 753 8.145767 CCCTAAATGTCTAAACCGTACATATCA 58.854 37.037 0.00 0.00 33.59 2.15
482 754 7.601508 CCCCTAAATGTCTAAACCGTACATATC 59.398 40.741 0.00 0.00 33.59 1.63
483 755 7.071572 ACCCCTAAATGTCTAAACCGTACATAT 59.928 37.037 0.00 0.00 33.59 1.78
484 756 6.383726 ACCCCTAAATGTCTAAACCGTACATA 59.616 38.462 0.00 0.00 33.59 2.29
485 757 5.190330 ACCCCTAAATGTCTAAACCGTACAT 59.810 40.000 0.00 0.00 35.40 2.29
639 913 0.107268 GTGGGTGTAACTCGTTGGGT 59.893 55.000 0.00 0.00 43.75 4.51
722 1342 4.389576 GTTTGTGAGCCGCAGCCG 62.390 66.667 0.00 0.00 41.25 5.52
732 1352 4.462508 TGCCAGATTTGTTTGTTTGTGA 57.537 36.364 0.00 0.00 0.00 3.58
814 1434 1.949847 CTTGAGGATCCCGTCGCTGT 61.950 60.000 8.55 0.00 0.00 4.40
822 1442 1.281925 TTCCAGCCCTTGAGGATCCC 61.282 60.000 8.55 0.11 38.24 3.85
830 1450 1.079127 ATCGTCGTTCCAGCCCTTG 60.079 57.895 0.00 0.00 0.00 3.61
929 1559 5.048434 TCGAGGATAGCACACTATGATTGAG 60.048 44.000 0.00 0.00 39.28 3.02
940 1570 2.420058 TCAGACTCGAGGATAGCACA 57.580 50.000 18.41 0.00 0.00 4.57
942 1572 3.181443 TGGTATCAGACTCGAGGATAGCA 60.181 47.826 25.27 25.27 44.85 3.49
947 1609 2.025155 GCTTGGTATCAGACTCGAGGA 58.975 52.381 18.41 4.74 0.00 3.71
957 1619 4.141135 AGCTAGAGTAGGAGCTTGGTATCA 60.141 45.833 0.00 0.00 46.99 2.15
982 1644 2.223947 CCATGGTCGATGGTACGATTCA 60.224 50.000 2.57 0.00 46.20 2.57
984 1646 2.526304 CCATGGTCGATGGTACGATT 57.474 50.000 2.57 0.00 46.20 3.34
996 1658 1.906333 AAAACCCACGGCCATGGTC 60.906 57.895 18.29 10.70 38.16 4.02
1042 1704 4.609018 CCTCCCGCCATACCGCTG 62.609 72.222 0.00 0.00 0.00 5.18
1046 1708 2.766651 TGACCCTCCCGCCATACC 60.767 66.667 0.00 0.00 0.00 2.73
1236 1898 2.935740 CGTGAGGAGCTGGCTGTCA 61.936 63.158 0.00 0.07 0.00 3.58
1392 2054 1.370064 GTACACGTTCACTGCCCCT 59.630 57.895 0.00 0.00 0.00 4.79
1395 2057 0.796312 CCATGTACACGTTCACTGCC 59.204 55.000 0.00 0.00 0.00 4.85
1398 2060 0.394938 TGGCCATGTACACGTTCACT 59.605 50.000 0.00 0.00 0.00 3.41
1401 2063 1.014352 GGATGGCCATGTACACGTTC 58.986 55.000 26.56 5.70 0.00 3.95
1498 2160 8.842358 AACTTGACTAATGACGATCCTAAAAA 57.158 30.769 0.00 0.00 0.00 1.94
1499 2161 9.932207 TTAACTTGACTAATGACGATCCTAAAA 57.068 29.630 0.00 0.00 0.00 1.52
1503 2165 9.530633 GTAATTAACTTGACTAATGACGATCCT 57.469 33.333 0.00 0.00 0.00 3.24
1504 2166 9.530633 AGTAATTAACTTGACTAATGACGATCC 57.469 33.333 0.00 0.00 33.35 3.36
1538 2200 9.810870 ACCCCTATAAACACACACTTATTTAAA 57.189 29.630 0.00 0.00 0.00 1.52
1541 2203 9.457436 CTTACCCCTATAAACACACACTTATTT 57.543 33.333 0.00 0.00 0.00 1.40
1542 2204 8.608598 ACTTACCCCTATAAACACACACTTATT 58.391 33.333 0.00 0.00 0.00 1.40
1543 2205 8.154420 ACTTACCCCTATAAACACACACTTAT 57.846 34.615 0.00 0.00 0.00 1.73
1544 2206 7.557875 ACTTACCCCTATAAACACACACTTA 57.442 36.000 0.00 0.00 0.00 2.24
1545 2207 6.443995 ACTTACCCCTATAAACACACACTT 57.556 37.500 0.00 0.00 0.00 3.16
1546 2208 7.744678 ATACTTACCCCTATAAACACACACT 57.255 36.000 0.00 0.00 0.00 3.55
1549 2211 9.846248 CGTATATACTTACCCCTATAAACACAC 57.154 37.037 11.05 0.00 0.00 3.82
1550 2212 8.522830 GCGTATATACTTACCCCTATAAACACA 58.477 37.037 11.05 0.00 0.00 3.72
1551 2213 8.522830 TGCGTATATACTTACCCCTATAAACAC 58.477 37.037 11.05 0.00 0.00 3.32
1552 2214 8.648698 TGCGTATATACTTACCCCTATAAACA 57.351 34.615 11.05 0.00 0.00 2.83
1555 2217 9.578576 CCTATGCGTATATACTTACCCCTATAA 57.421 37.037 11.05 0.00 0.00 0.98
1556 2218 8.727149 ACCTATGCGTATATACTTACCCCTATA 58.273 37.037 11.05 0.00 0.00 1.31
1557 2219 7.589993 ACCTATGCGTATATACTTACCCCTAT 58.410 38.462 11.05 0.00 0.00 2.57
1558 2220 6.973642 ACCTATGCGTATATACTTACCCCTA 58.026 40.000 11.05 0.00 0.00 3.53
1559 2221 5.835582 ACCTATGCGTATATACTTACCCCT 58.164 41.667 11.05 0.00 0.00 4.79
1560 2222 7.830099 ATACCTATGCGTATATACTTACCCC 57.170 40.000 11.05 0.00 0.00 4.95
1565 2227 9.064706 AGCGATTATACCTATGCGTATATACTT 57.935 33.333 11.05 0.00 32.57 2.24
1566 2228 8.618702 AGCGATTATACCTATGCGTATATACT 57.381 34.615 11.05 0.00 32.57 2.12
1567 2229 9.114965 CAAGCGATTATACCTATGCGTATATAC 57.885 37.037 2.53 2.53 32.57 1.47
1568 2230 7.806487 GCAAGCGATTATACCTATGCGTATATA 59.194 37.037 0.00 0.00 32.57 0.86
1569 2231 6.641314 GCAAGCGATTATACCTATGCGTATAT 59.359 38.462 0.00 0.00 32.57 0.86
1570 2232 5.975344 GCAAGCGATTATACCTATGCGTATA 59.025 40.000 0.00 0.00 31.42 1.47
1571 2233 4.804139 GCAAGCGATTATACCTATGCGTAT 59.196 41.667 0.00 0.00 33.52 3.06
1572 2234 4.171005 GCAAGCGATTATACCTATGCGTA 58.829 43.478 0.00 0.00 0.00 4.42
1573 2235 2.993899 GCAAGCGATTATACCTATGCGT 59.006 45.455 0.00 0.00 0.00 5.24
1574 2236 3.641439 GCAAGCGATTATACCTATGCG 57.359 47.619 0.00 0.00 0.00 4.73
1575 2237 2.993899 ACGCAAGCGATTATACCTATGC 59.006 45.455 22.30 0.00 42.83 3.14
1576 2238 4.324669 CAGACGCAAGCGATTATACCTATG 59.675 45.833 22.30 0.00 42.83 2.23
1577 2239 4.022242 ACAGACGCAAGCGATTATACCTAT 60.022 41.667 22.30 0.00 42.83 2.57
1578 2240 3.317149 ACAGACGCAAGCGATTATACCTA 59.683 43.478 22.30 0.00 42.83 3.08
1579 2241 2.100916 ACAGACGCAAGCGATTATACCT 59.899 45.455 22.30 0.00 42.83 3.08
1580 2242 2.470821 ACAGACGCAAGCGATTATACC 58.529 47.619 22.30 1.39 42.83 2.73
1581 2243 3.424529 GGTACAGACGCAAGCGATTATAC 59.575 47.826 22.30 15.79 42.83 1.47
1582 2244 3.635331 GGTACAGACGCAAGCGATTATA 58.365 45.455 22.30 5.43 42.83 0.98
1583 2245 2.470821 GGTACAGACGCAAGCGATTAT 58.529 47.619 22.30 6.39 42.83 1.28
1584 2246 1.796253 CGGTACAGACGCAAGCGATTA 60.796 52.381 22.30 3.51 42.83 1.75
1585 2247 1.076533 CGGTACAGACGCAAGCGATT 61.077 55.000 22.30 5.56 42.83 3.34
1586 2248 1.516386 CGGTACAGACGCAAGCGAT 60.516 57.895 22.30 6.28 42.83 4.58
1587 2249 1.576451 TACGGTACAGACGCAAGCGA 61.576 55.000 22.30 0.00 42.83 4.93
1588 2250 0.524816 ATACGGTACAGACGCAAGCG 60.525 55.000 13.50 13.50 46.03 4.68
1589 2251 1.636988 AATACGGTACAGACGCAAGC 58.363 50.000 0.00 0.00 45.62 4.01
1652 2314 9.840427 CCGTTTGAAAATAAGTATCACTGATTT 57.160 29.630 0.00 0.00 40.21 2.17
1653 2315 9.226606 TCCGTTTGAAAATAAGTATCACTGATT 57.773 29.630 0.00 0.00 30.51 2.57
1654 2316 8.786826 TCCGTTTGAAAATAAGTATCACTGAT 57.213 30.769 0.00 0.00 0.00 2.90
1655 2317 8.092068 TCTCCGTTTGAAAATAAGTATCACTGA 58.908 33.333 0.00 0.00 0.00 3.41
1656 2318 8.251750 TCTCCGTTTGAAAATAAGTATCACTG 57.748 34.615 0.00 0.00 0.00 3.66
1657 2319 8.842358 TTCTCCGTTTGAAAATAAGTATCACT 57.158 30.769 0.00 0.00 0.00 3.41
1699 2361 8.643324 GGTGTGAGATTTGTAATAGAGTCCTAT 58.357 37.037 0.00 0.00 37.19 2.57
1700 2362 7.618117 TGGTGTGAGATTTGTAATAGAGTCCTA 59.382 37.037 0.00 0.00 0.00 2.94
1701 2363 6.440647 TGGTGTGAGATTTGTAATAGAGTCCT 59.559 38.462 0.00 0.00 0.00 3.85
1702 2364 6.640518 TGGTGTGAGATTTGTAATAGAGTCC 58.359 40.000 0.00 0.00 0.00 3.85
1703 2365 7.548097 TCTGGTGTGAGATTTGTAATAGAGTC 58.452 38.462 0.00 0.00 0.00 3.36
1704 2366 7.482169 TCTGGTGTGAGATTTGTAATAGAGT 57.518 36.000 0.00 0.00 0.00 3.24
1705 2367 8.954950 AATCTGGTGTGAGATTTGTAATAGAG 57.045 34.615 0.00 0.00 39.23 2.43
1733 2395 9.956720 CAAAAATGTTTAATTTGCCATGGTAAA 57.043 25.926 27.23 27.23 34.50 2.01
1734 2396 9.342308 TCAAAAATGTTTAATTTGCCATGGTAA 57.658 25.926 11.68 11.68 34.77 2.85
1735 2397 8.908786 TCAAAAATGTTTAATTTGCCATGGTA 57.091 26.923 14.67 5.86 34.77 3.25
1736 2398 7.814264 TCAAAAATGTTTAATTTGCCATGGT 57.186 28.000 14.67 0.00 34.77 3.55
1737 2399 7.808856 CCTTCAAAAATGTTTAATTTGCCATGG 59.191 33.333 7.63 7.63 34.77 3.66
1738 2400 8.351461 ACCTTCAAAAATGTTTAATTTGCCATG 58.649 29.630 0.00 0.00 34.77 3.66
1739 2401 8.462589 ACCTTCAAAAATGTTTAATTTGCCAT 57.537 26.923 0.00 0.00 34.77 4.40
1740 2402 7.872113 ACCTTCAAAAATGTTTAATTTGCCA 57.128 28.000 0.00 0.00 34.77 4.92
1779 2441 7.455641 TCGGCAACTAAATTTGATTTCCTTA 57.544 32.000 0.00 0.00 33.82 2.69
1780 2442 6.339587 TCGGCAACTAAATTTGATTTCCTT 57.660 33.333 0.00 0.00 33.82 3.36
1781 2443 5.622233 GCTCGGCAACTAAATTTGATTTCCT 60.622 40.000 0.00 0.00 33.82 3.36
1783 2445 5.160641 TGCTCGGCAACTAAATTTGATTTC 58.839 37.500 0.00 0.00 34.76 2.17
1787 2449 3.755905 TCATGCTCGGCAACTAAATTTGA 59.244 39.130 0.00 0.00 43.62 2.69
1788 2450 3.853671 GTCATGCTCGGCAACTAAATTTG 59.146 43.478 0.00 0.00 43.62 2.32
1790 2452 3.081061 TGTCATGCTCGGCAACTAAATT 58.919 40.909 2.68 0.00 43.62 1.82
1792 2454 2.177394 TGTCATGCTCGGCAACTAAA 57.823 45.000 2.68 0.00 43.62 1.85
1793 2455 2.177394 TTGTCATGCTCGGCAACTAA 57.823 45.000 2.68 0.00 43.62 2.24
1794 2456 2.177394 TTTGTCATGCTCGGCAACTA 57.823 45.000 2.68 0.00 43.62 2.24
1795 2457 1.470098 GATTTGTCATGCTCGGCAACT 59.530 47.619 2.68 0.00 43.62 3.16
1796 2458 1.468054 GGATTTGTCATGCTCGGCAAC 60.468 52.381 2.68 0.00 43.62 4.17
1797 2459 0.810648 GGATTTGTCATGCTCGGCAA 59.189 50.000 2.68 0.00 43.62 4.52
1798 2460 1.368345 CGGATTTGTCATGCTCGGCA 61.368 55.000 1.01 1.01 44.86 5.69
1799 2461 1.353103 CGGATTTGTCATGCTCGGC 59.647 57.895 0.00 0.00 0.00 5.54
1800 2462 0.652592 GACGGATTTGTCATGCTCGG 59.347 55.000 0.00 0.00 38.75 4.63
1801 2463 1.590238 GAGACGGATTTGTCATGCTCG 59.410 52.381 0.00 0.00 41.41 5.03
1802 2464 2.621338 TGAGACGGATTTGTCATGCTC 58.379 47.619 0.00 0.00 41.41 4.26
1803 2465 2.768253 TGAGACGGATTTGTCATGCT 57.232 45.000 0.00 0.00 41.41 3.79
1804 2466 4.361451 AAATGAGACGGATTTGTCATGC 57.639 40.909 0.00 0.00 41.41 4.06
1805 2467 8.915871 AAATAAAATGAGACGGATTTGTCATG 57.084 30.769 0.00 0.00 41.41 3.07
1806 2468 9.573133 GAAAATAAAATGAGACGGATTTGTCAT 57.427 29.630 0.00 0.00 41.41 3.06
1807 2469 8.792633 AGAAAATAAAATGAGACGGATTTGTCA 58.207 29.630 0.00 0.00 41.41 3.58
1808 2470 9.065871 CAGAAAATAAAATGAGACGGATTTGTC 57.934 33.333 0.00 0.00 39.21 3.18
1809 2471 8.792633 TCAGAAAATAAAATGAGACGGATTTGT 58.207 29.630 0.00 0.00 0.00 2.83
1810 2472 9.793252 ATCAGAAAATAAAATGAGACGGATTTG 57.207 29.630 0.00 0.00 0.00 2.32
1814 2476 9.884636 TTCTATCAGAAAATAAAATGAGACGGA 57.115 29.630 0.00 0.00 29.99 4.69
1829 2491 5.048083 AGCACGGCAATTTTTCTATCAGAAA 60.048 36.000 0.00 0.00 42.00 2.52
1830 2492 4.458989 AGCACGGCAATTTTTCTATCAGAA 59.541 37.500 0.00 0.00 31.28 3.02
1831 2493 4.009675 AGCACGGCAATTTTTCTATCAGA 58.990 39.130 0.00 0.00 0.00 3.27
1832 2494 4.361451 AGCACGGCAATTTTTCTATCAG 57.639 40.909 0.00 0.00 0.00 2.90
1833 2495 4.217334 TCAAGCACGGCAATTTTTCTATCA 59.783 37.500 0.00 0.00 0.00 2.15
1834 2496 4.732784 TCAAGCACGGCAATTTTTCTATC 58.267 39.130 0.00 0.00 0.00 2.08
1835 2497 4.782019 TCAAGCACGGCAATTTTTCTAT 57.218 36.364 0.00 0.00 0.00 1.98
1836 2498 4.576216 TTCAAGCACGGCAATTTTTCTA 57.424 36.364 0.00 0.00 0.00 2.10
1837 2499 3.451141 TTCAAGCACGGCAATTTTTCT 57.549 38.095 0.00 0.00 0.00 2.52
1838 2500 3.555547 AGTTTCAAGCACGGCAATTTTTC 59.444 39.130 0.00 0.00 0.00 2.29
1839 2501 3.530535 AGTTTCAAGCACGGCAATTTTT 58.469 36.364 0.00 0.00 0.00 1.94
1840 2502 3.177997 AGTTTCAAGCACGGCAATTTT 57.822 38.095 0.00 0.00 0.00 1.82
1841 2503 2.888834 AGTTTCAAGCACGGCAATTT 57.111 40.000 0.00 0.00 0.00 1.82
1842 2504 4.314740 TTTAGTTTCAAGCACGGCAATT 57.685 36.364 0.00 0.00 0.00 2.32
1843 2505 4.519540 ATTTAGTTTCAAGCACGGCAAT 57.480 36.364 0.00 0.00 0.00 3.56
1844 2506 4.314740 AATTTAGTTTCAAGCACGGCAA 57.685 36.364 0.00 0.00 0.00 4.52
1845 2507 4.047822 CAAATTTAGTTTCAAGCACGGCA 58.952 39.130 0.00 0.00 0.00 5.69
1846 2508 4.048504 ACAAATTTAGTTTCAAGCACGGC 58.951 39.130 0.00 0.00 0.00 5.68
1847 2509 5.277825 TGACAAATTTAGTTTCAAGCACGG 58.722 37.500 0.00 0.00 0.00 4.94
1848 2510 6.636447 TGATGACAAATTTAGTTTCAAGCACG 59.364 34.615 0.00 0.00 0.00 5.34
1849 2511 7.096065 GGTGATGACAAATTTAGTTTCAAGCAC 60.096 37.037 0.00 5.19 0.00 4.40
1850 2512 6.922957 GGTGATGACAAATTTAGTTTCAAGCA 59.077 34.615 0.00 0.00 0.00 3.91
1851 2513 6.922957 TGGTGATGACAAATTTAGTTTCAAGC 59.077 34.615 0.00 0.00 0.00 4.01
1852 2514 8.918658 CATGGTGATGACAAATTTAGTTTCAAG 58.081 33.333 0.00 0.00 0.00 3.02
1853 2515 7.384660 GCATGGTGATGACAAATTTAGTTTCAA 59.615 33.333 0.00 0.00 0.00 2.69
1854 2516 6.867816 GCATGGTGATGACAAATTTAGTTTCA 59.132 34.615 0.00 0.00 0.00 2.69
1855 2517 7.092716 AGCATGGTGATGACAAATTTAGTTTC 58.907 34.615 0.00 0.00 0.00 2.78
1856 2518 6.996509 AGCATGGTGATGACAAATTTAGTTT 58.003 32.000 0.00 0.00 0.00 2.66
1857 2519 6.594788 AGCATGGTGATGACAAATTTAGTT 57.405 33.333 0.00 0.00 0.00 2.24
1858 2520 7.701539 TTAGCATGGTGATGACAAATTTAGT 57.298 32.000 7.89 0.00 0.00 2.24
1859 2521 9.669353 GTATTAGCATGGTGATGACAAATTTAG 57.331 33.333 12.05 0.00 0.00 1.85
1860 2522 9.183368 TGTATTAGCATGGTGATGACAAATTTA 57.817 29.630 12.05 0.00 0.00 1.40
1861 2523 8.065473 TGTATTAGCATGGTGATGACAAATTT 57.935 30.769 12.05 0.00 0.00 1.82
1862 2524 7.643569 TGTATTAGCATGGTGATGACAAATT 57.356 32.000 12.05 0.00 0.00 1.82
1863 2525 7.643569 TTGTATTAGCATGGTGATGACAAAT 57.356 32.000 12.05 2.68 0.00 2.32
1864 2526 7.459795 TTTGTATTAGCATGGTGATGACAAA 57.540 32.000 20.35 20.35 32.79 2.83
1865 2527 7.643569 ATTTGTATTAGCATGGTGATGACAA 57.356 32.000 12.05 13.63 0.00 3.18
1866 2528 7.482474 CAATTTGTATTAGCATGGTGATGACA 58.518 34.615 12.05 9.30 0.00 3.58
1867 2529 6.418819 GCAATTTGTATTAGCATGGTGATGAC 59.581 38.462 12.05 7.20 0.00 3.06
1868 2530 6.461370 GGCAATTTGTATTAGCATGGTGATGA 60.461 38.462 12.05 0.00 0.00 2.92
1869 2531 5.693104 GGCAATTTGTATTAGCATGGTGATG 59.307 40.000 12.05 0.00 0.00 3.07
1870 2532 5.363292 TGGCAATTTGTATTAGCATGGTGAT 59.637 36.000 7.89 7.60 0.00 3.06
1871 2533 4.708909 TGGCAATTTGTATTAGCATGGTGA 59.291 37.500 7.89 0.00 0.00 4.02
1872 2534 5.008619 TGGCAATTTGTATTAGCATGGTG 57.991 39.130 7.89 0.00 0.00 4.17
1873 2535 5.363292 TCATGGCAATTTGTATTAGCATGGT 59.637 36.000 1.62 1.62 0.00 3.55
1874 2536 5.845103 TCATGGCAATTTGTATTAGCATGG 58.155 37.500 0.00 0.00 0.00 3.66
1875 2537 7.204604 TCTTCATGGCAATTTGTATTAGCATG 58.795 34.615 0.00 0.00 0.00 4.06
1876 2538 7.350744 TCTTCATGGCAATTTGTATTAGCAT 57.649 32.000 0.00 0.00 0.00 3.79
1877 2539 6.772360 TCTTCATGGCAATTTGTATTAGCA 57.228 33.333 0.00 0.00 0.00 3.49
1878 2540 6.197096 CGTTCTTCATGGCAATTTGTATTAGC 59.803 38.462 0.00 0.00 0.00 3.09
1879 2541 7.250569 ACGTTCTTCATGGCAATTTGTATTAG 58.749 34.615 0.00 0.00 0.00 1.73
1880 2542 7.094592 TGACGTTCTTCATGGCAATTTGTATTA 60.095 33.333 0.00 0.00 0.00 0.98
1881 2543 6.024552 ACGTTCTTCATGGCAATTTGTATT 57.975 33.333 0.00 0.00 0.00 1.89
1882 2544 5.182950 TGACGTTCTTCATGGCAATTTGTAT 59.817 36.000 0.00 0.00 0.00 2.29
1883 2545 4.517075 TGACGTTCTTCATGGCAATTTGTA 59.483 37.500 0.00 0.00 0.00 2.41
1884 2546 3.317711 TGACGTTCTTCATGGCAATTTGT 59.682 39.130 0.00 0.00 0.00 2.83
1885 2547 3.899734 TGACGTTCTTCATGGCAATTTG 58.100 40.909 0.00 0.00 0.00 2.32
1886 2548 3.820467 TCTGACGTTCTTCATGGCAATTT 59.180 39.130 0.00 0.00 0.00 1.82
1887 2549 3.411446 TCTGACGTTCTTCATGGCAATT 58.589 40.909 0.00 0.00 0.00 2.32
1888 2550 3.057969 TCTGACGTTCTTCATGGCAAT 57.942 42.857 0.00 0.00 0.00 3.56
1889 2551 2.542020 TCTGACGTTCTTCATGGCAA 57.458 45.000 0.00 0.00 0.00 4.52
1890 2552 2.289631 ACATCTGACGTTCTTCATGGCA 60.290 45.455 0.00 0.00 0.00 4.92
1891 2553 2.094894 CACATCTGACGTTCTTCATGGC 59.905 50.000 0.00 0.00 0.00 4.40
1892 2554 2.094894 GCACATCTGACGTTCTTCATGG 59.905 50.000 0.00 0.00 0.00 3.66
1893 2555 2.094894 GGCACATCTGACGTTCTTCATG 59.905 50.000 0.00 0.00 0.00 3.07
1894 2556 2.027745 AGGCACATCTGACGTTCTTCAT 60.028 45.455 0.00 0.00 0.00 2.57
1895 2557 1.344438 AGGCACATCTGACGTTCTTCA 59.656 47.619 0.00 0.00 0.00 3.02
1896 2558 2.086054 AGGCACATCTGACGTTCTTC 57.914 50.000 0.00 0.00 0.00 2.87
1897 2559 3.678056 TTAGGCACATCTGACGTTCTT 57.322 42.857 0.00 0.00 0.00 2.52
1898 2560 3.678056 TTTAGGCACATCTGACGTTCT 57.322 42.857 0.00 0.00 0.00 3.01
1899 2561 4.742438 TTTTTAGGCACATCTGACGTTC 57.258 40.909 0.00 0.00 0.00 3.95
1900 2562 5.003804 AGATTTTTAGGCACATCTGACGTT 58.996 37.500 0.00 0.00 0.00 3.99
1901 2563 4.393062 CAGATTTTTAGGCACATCTGACGT 59.607 41.667 2.41 0.00 43.68 4.34
1902 2564 4.631377 TCAGATTTTTAGGCACATCTGACG 59.369 41.667 6.61 0.00 44.31 4.35
1904 2566 4.631377 CGTCAGATTTTTAGGCACATCTGA 59.369 41.667 6.61 6.61 46.07 3.27
1905 2567 4.393062 ACGTCAGATTTTTAGGCACATCTG 59.607 41.667 2.19 2.19 42.75 2.90
1906 2568 4.579869 ACGTCAGATTTTTAGGCACATCT 58.420 39.130 0.00 0.00 0.00 2.90
1907 2569 4.391830 TGACGTCAGATTTTTAGGCACATC 59.608 41.667 15.76 0.00 0.00 3.06
1908 2570 4.323417 TGACGTCAGATTTTTAGGCACAT 58.677 39.130 15.76 0.00 0.00 3.21
1909 2571 3.734463 TGACGTCAGATTTTTAGGCACA 58.266 40.909 15.76 0.00 0.00 4.57
1910 2572 4.946784 ATGACGTCAGATTTTTAGGCAC 57.053 40.909 24.41 0.00 0.00 5.01
1911 2573 7.624360 AAATATGACGTCAGATTTTTAGGCA 57.376 32.000 34.08 6.29 42.92 4.75
1951 2613 8.273780 TGCCTACAAACAAAATTGTCATTTTT 57.726 26.923 0.00 0.59 42.33 1.94
1952 2614 7.552330 ACTGCCTACAAACAAAATTGTCATTTT 59.448 29.630 0.00 0.00 42.33 1.82
1953 2615 7.011295 CACTGCCTACAAACAAAATTGTCATTT 59.989 33.333 0.00 0.00 42.33 2.32
1954 2616 6.479660 CACTGCCTACAAACAAAATTGTCATT 59.520 34.615 0.00 0.00 42.33 2.57
1955 2617 5.984926 CACTGCCTACAAACAAAATTGTCAT 59.015 36.000 0.00 0.00 42.33 3.06
1960 2622 3.727726 GGCACTGCCTACAAACAAAATT 58.272 40.909 13.28 0.00 46.69 1.82
2036 2698 3.679389 GAGACAGAGGCTGAATTGGAAA 58.321 45.455 0.00 0.00 35.18 3.13
2164 2826 4.514577 AGAAGATGGCGCCGACGG 62.515 66.667 23.90 10.29 40.57 4.79
2207 2869 2.034066 CGGCCTTTCCCTTGCTGA 59.966 61.111 0.00 0.00 33.12 4.26
2216 2878 4.699522 ACCTCGCCACGGCCTTTC 62.700 66.667 0.00 0.00 37.98 2.62
2426 3088 2.333938 GGCGCGTAGAAGCCGATA 59.666 61.111 8.43 0.00 42.18 2.92
2462 3124 2.125391 GCACTCTCGCTCATGCCA 60.125 61.111 0.00 0.00 35.36 4.92
2483 3145 1.293498 GACGATGGTGGACAGCAGT 59.707 57.895 10.14 3.50 42.52 4.40
2511 3173 3.148279 GGTGGACGCGGAGGAGAT 61.148 66.667 12.47 0.00 0.00 2.75
2684 3346 3.900601 AGTAGATGGCGATGAGGAAGATT 59.099 43.478 0.00 0.00 0.00 2.40
2698 3360 0.105039 GAAGCCGGTGGAGTAGATGG 59.895 60.000 1.90 0.00 0.00 3.51
2700 3362 2.116383 CGAAGCCGGTGGAGTAGAT 58.884 57.895 1.90 0.00 0.00 1.98
2756 3418 1.045350 CCTCCAGCGGGAAGATCTCA 61.045 60.000 7.12 0.00 44.38 3.27
2801 3463 4.446413 ACGAATCCCGACGCCACC 62.446 66.667 0.00 0.00 41.76 4.61
2864 3526 2.970974 GAACAGCCACGCCTTCAGC 61.971 63.158 0.00 0.00 38.52 4.26
2865 3527 0.886490 AAGAACAGCCACGCCTTCAG 60.886 55.000 0.00 0.00 0.00 3.02
2894 3556 0.621280 TCATGACCAGGATCCAGCCA 60.621 55.000 15.82 3.68 0.00 4.75
2897 3559 0.105593 CCGTCATGACCAGGATCCAG 59.894 60.000 20.03 5.70 0.00 3.86
2978 3640 2.001269 GTACCAGTGCCTCCCCCAT 61.001 63.158 0.00 0.00 0.00 4.00
2986 3648 1.205893 CTCTCTTCCAGTACCAGTGCC 59.794 57.143 0.00 0.00 0.00 5.01
3020 3682 1.446907 TCTGACCGTCGTCTACTTCC 58.553 55.000 0.00 0.00 39.94 3.46
3027 3689 1.085091 TAGAGCTTCTGACCGTCGTC 58.915 55.000 0.00 0.00 39.66 4.20
3046 3708 5.888161 TCTGAAAGAAAGTGGAAGAAGCTTT 59.112 36.000 0.00 0.00 42.31 3.51
3052 3714 6.325028 TCTCTTCTCTGAAAGAAAGTGGAAGA 59.675 38.462 0.00 0.00 46.34 2.87
3068 3730 5.896073 TCACCCTTTTCTTTCTCTTCTCT 57.104 39.130 0.00 0.00 0.00 3.10
3069 3731 5.049060 GCTTCACCCTTTTCTTTCTCTTCTC 60.049 44.000 0.00 0.00 0.00 2.87
3070 3732 4.824537 GCTTCACCCTTTTCTTTCTCTTCT 59.175 41.667 0.00 0.00 0.00 2.85
3071 3733 4.022762 GGCTTCACCCTTTTCTTTCTCTTC 60.023 45.833 0.00 0.00 0.00 2.87
3072 3734 3.891977 GGCTTCACCCTTTTCTTTCTCTT 59.108 43.478 0.00 0.00 0.00 2.85
3073 3735 3.139211 AGGCTTCACCCTTTTCTTTCTCT 59.861 43.478 0.00 0.00 40.58 3.10
3074 3736 3.491342 AGGCTTCACCCTTTTCTTTCTC 58.509 45.455 0.00 0.00 40.58 2.87
3075 3737 3.602205 AGGCTTCACCCTTTTCTTTCT 57.398 42.857 0.00 0.00 40.58 2.52
3076 3738 5.984695 ATAAGGCTTCACCCTTTTCTTTC 57.015 39.130 1.30 0.00 42.48 2.62
3077 3739 5.048013 CGAATAAGGCTTCACCCTTTTCTTT 60.048 40.000 1.30 0.00 42.48 2.52
3078 3740 4.459337 CGAATAAGGCTTCACCCTTTTCTT 59.541 41.667 1.30 0.00 42.48 2.52
3079 3741 4.010349 CGAATAAGGCTTCACCCTTTTCT 58.990 43.478 1.30 0.00 42.48 2.52
3080 3742 4.007659 TCGAATAAGGCTTCACCCTTTTC 58.992 43.478 1.30 3.28 42.48 2.29
3081 3743 4.028993 TCGAATAAGGCTTCACCCTTTT 57.971 40.909 1.30 0.00 42.48 2.27
3082 3744 3.713826 TCGAATAAGGCTTCACCCTTT 57.286 42.857 1.30 0.00 42.48 3.11
3083 3745 3.933861 ATCGAATAAGGCTTCACCCTT 57.066 42.857 1.30 0.00 46.58 3.95
3084 3746 3.199946 TGAATCGAATAAGGCTTCACCCT 59.800 43.478 1.30 0.00 40.58 4.34
3085 3747 3.541632 TGAATCGAATAAGGCTTCACCC 58.458 45.455 1.30 0.00 40.58 4.61
3086 3748 4.442706 TCTGAATCGAATAAGGCTTCACC 58.557 43.478 1.30 0.00 39.61 4.02
3087 3749 4.509600 CCTCTGAATCGAATAAGGCTTCAC 59.490 45.833 1.30 0.00 0.00 3.18
3088 3750 4.443457 CCCTCTGAATCGAATAAGGCTTCA 60.443 45.833 1.30 0.00 0.00 3.02
3089 3751 4.061596 CCCTCTGAATCGAATAAGGCTTC 58.938 47.826 1.30 0.00 0.00 3.86
3090 3752 3.456277 ACCCTCTGAATCGAATAAGGCTT 59.544 43.478 4.58 4.58 0.00 4.35
3091 3753 3.041946 ACCCTCTGAATCGAATAAGGCT 58.958 45.455 0.00 0.00 0.00 4.58
3092 3754 3.477210 ACCCTCTGAATCGAATAAGGC 57.523 47.619 0.00 0.00 0.00 4.35
3093 3755 5.428253 TGAAACCCTCTGAATCGAATAAGG 58.572 41.667 0.00 0.00 0.00 2.69
3094 3756 6.985188 TTGAAACCCTCTGAATCGAATAAG 57.015 37.500 0.00 0.00 0.00 1.73
3095 3757 6.940298 ACTTTGAAACCCTCTGAATCGAATAA 59.060 34.615 0.00 0.00 0.00 1.40
3096 3758 6.371548 CACTTTGAAACCCTCTGAATCGAATA 59.628 38.462 0.00 0.00 0.00 1.75
3097 3759 5.182001 CACTTTGAAACCCTCTGAATCGAAT 59.818 40.000 0.00 0.00 0.00 3.34
3098 3760 4.515191 CACTTTGAAACCCTCTGAATCGAA 59.485 41.667 0.00 0.00 0.00 3.71
3099 3761 4.065088 CACTTTGAAACCCTCTGAATCGA 58.935 43.478 0.00 0.00 0.00 3.59
3100 3762 3.189287 CCACTTTGAAACCCTCTGAATCG 59.811 47.826 0.00 0.00 0.00 3.34
3101 3763 4.398319 TCCACTTTGAAACCCTCTGAATC 58.602 43.478 0.00 0.00 0.00 2.52
3102 3764 4.453480 TCCACTTTGAAACCCTCTGAAT 57.547 40.909 0.00 0.00 0.00 2.57
3103 3765 3.943671 TCCACTTTGAAACCCTCTGAA 57.056 42.857 0.00 0.00 0.00 3.02
3104 3766 3.557054 CGATCCACTTTGAAACCCTCTGA 60.557 47.826 0.00 0.00 0.00 3.27
3105 3767 2.744202 CGATCCACTTTGAAACCCTCTG 59.256 50.000 0.00 0.00 0.00 3.35
3106 3768 2.637872 TCGATCCACTTTGAAACCCTCT 59.362 45.455 0.00 0.00 0.00 3.69
3107 3769 3.053831 TCGATCCACTTTGAAACCCTC 57.946 47.619 0.00 0.00 0.00 4.30
3108 3770 3.502123 TTCGATCCACTTTGAAACCCT 57.498 42.857 0.00 0.00 0.00 4.34
3109 3771 4.546570 CTTTTCGATCCACTTTGAAACCC 58.453 43.478 0.00 0.00 30.48 4.11
3110 3772 4.546570 CCTTTTCGATCCACTTTGAAACC 58.453 43.478 0.00 0.00 30.48 3.27
3111 3773 4.037565 ACCCTTTTCGATCCACTTTGAAAC 59.962 41.667 0.00 0.00 30.48 2.78
3112 3774 4.037446 CACCCTTTTCGATCCACTTTGAAA 59.963 41.667 0.00 0.00 0.00 2.69
3113 3775 3.568007 CACCCTTTTCGATCCACTTTGAA 59.432 43.478 0.00 0.00 0.00 2.69
3114 3776 3.146066 CACCCTTTTCGATCCACTTTGA 58.854 45.455 0.00 0.00 0.00 2.69
3115 3777 2.228822 CCACCCTTTTCGATCCACTTTG 59.771 50.000 0.00 0.00 0.00 2.77
3116 3778 2.107552 TCCACCCTTTTCGATCCACTTT 59.892 45.455 0.00 0.00 0.00 2.66
3117 3779 1.702957 TCCACCCTTTTCGATCCACTT 59.297 47.619 0.00 0.00 0.00 3.16
3118 3780 1.279271 CTCCACCCTTTTCGATCCACT 59.721 52.381 0.00 0.00 0.00 4.00
3119 3781 1.739067 CTCCACCCTTTTCGATCCAC 58.261 55.000 0.00 0.00 0.00 4.02
3120 3782 0.035439 GCTCCACCCTTTTCGATCCA 60.035 55.000 0.00 0.00 0.00 3.41
3121 3783 0.748367 GGCTCCACCCTTTTCGATCC 60.748 60.000 0.00 0.00 0.00 3.36
3122 3784 0.253327 AGGCTCCACCCTTTTCGATC 59.747 55.000 0.00 0.00 40.58 3.69
3123 3785 0.035056 CAGGCTCCACCCTTTTCGAT 60.035 55.000 0.00 0.00 40.58 3.59
3124 3786 1.125093 TCAGGCTCCACCCTTTTCGA 61.125 55.000 0.00 0.00 40.58 3.71
3125 3787 0.035056 ATCAGGCTCCACCCTTTTCG 60.035 55.000 0.00 0.00 40.58 3.46
3126 3788 2.222227 AATCAGGCTCCACCCTTTTC 57.778 50.000 0.00 0.00 40.58 2.29
3127 3789 2.378547 TGTAATCAGGCTCCACCCTTTT 59.621 45.455 0.00 0.00 40.58 2.27
3128 3790 1.992557 TGTAATCAGGCTCCACCCTTT 59.007 47.619 0.00 0.00 40.58 3.11
3129 3791 1.668826 TGTAATCAGGCTCCACCCTT 58.331 50.000 0.00 0.00 40.58 3.95
3130 3792 1.561542 CTTGTAATCAGGCTCCACCCT 59.438 52.381 0.00 0.00 40.58 4.34
3131 3793 1.559682 TCTTGTAATCAGGCTCCACCC 59.440 52.381 0.00 0.00 40.58 4.61
3132 3794 3.209410 CATCTTGTAATCAGGCTCCACC 58.791 50.000 0.00 0.00 39.61 4.61
3133 3795 3.209410 CCATCTTGTAATCAGGCTCCAC 58.791 50.000 0.00 0.00 0.00 4.02
3134 3796 2.421952 GCCATCTTGTAATCAGGCTCCA 60.422 50.000 0.00 0.00 39.02 3.86
3135 3797 2.225467 GCCATCTTGTAATCAGGCTCC 58.775 52.381 0.00 0.00 39.02 4.70
3136 3798 2.923121 TGCCATCTTGTAATCAGGCTC 58.077 47.619 0.00 0.00 42.46 4.70
3137 3799 3.370840 TTGCCATCTTGTAATCAGGCT 57.629 42.857 0.00 0.00 42.46 4.58
3138 3800 3.429410 GGTTTGCCATCTTGTAATCAGGC 60.429 47.826 0.00 0.00 42.32 4.85
3139 3801 3.131046 GGGTTTGCCATCTTGTAATCAGG 59.869 47.826 0.00 0.00 36.17 3.86
3140 3802 3.181497 CGGGTTTGCCATCTTGTAATCAG 60.181 47.826 0.00 0.00 36.17 2.90
3141 3803 2.752354 CGGGTTTGCCATCTTGTAATCA 59.248 45.455 0.00 0.00 36.17 2.57
3142 3804 2.752903 ACGGGTTTGCCATCTTGTAATC 59.247 45.455 0.00 0.00 36.17 1.75
3161 3823 9.941991 CTCAATTTTTCATAAAAGTATGCAACG 57.058 29.630 0.00 0.00 37.59 4.10
3175 3837 4.677182 ACTAGGCCCACTCAATTTTTCAT 58.323 39.130 0.00 0.00 0.00 2.57
3253 3915 5.150715 TGGGCCATAAATAATGTTGCCATA 58.849 37.500 0.00 0.00 41.97 2.74
3533 4195 5.989777 TCTACCTTCTTTACAGTTCTGCAAC 59.010 40.000 0.00 0.00 0.00 4.17
3542 4204 6.934645 TGTTCCATGTTCTACCTTCTTTACAG 59.065 38.462 0.00 0.00 0.00 2.74
3636 4298 1.134848 GCCTCCTGCAACAACAACAAA 60.135 47.619 0.00 0.00 40.77 2.83
3639 4301 1.008538 CGCCTCCTGCAACAACAAC 60.009 57.895 0.00 0.00 41.33 3.32
3832 4494 3.385115 CCTCCCAAGGAACACTAGGTAT 58.615 50.000 0.00 0.00 46.67 2.73
3894 4556 5.211201 ACAAATATTCAATCCCTCCCCTTG 58.789 41.667 0.00 0.00 0.00 3.61
3907 4569 8.821686 AACCTATCCATGACAACAAATATTCA 57.178 30.769 0.00 0.00 0.00 2.57
4000 4662 4.980590 TGCAAGCGAATAATTTCACGAAT 58.019 34.783 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.