Multiple sequence alignment - TraesCS3D01G104700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G104700 chr3D 100.000 3083 0 0 1 3083 57174137 57177219 0.000000e+00 5694.0
1 TraesCS3D01G104700 chr3D 88.928 1129 83 22 1752 2845 57388766 57387645 0.000000e+00 1354.0
2 TraesCS3D01G104700 chr3D 89.744 741 35 12 1042 1759 57392939 57392217 0.000000e+00 909.0
3 TraesCS3D01G104700 chr3D 89.091 110 8 1 2974 3083 57337330 57337225 1.930000e-27 134.0
4 TraesCS3D01G104700 chr3B 88.950 1448 76 27 1011 2425 90212813 90211417 0.000000e+00 1711.0
5 TraesCS3D01G104700 chr3B 88.698 699 54 8 1581 2278 90150239 90150913 0.000000e+00 830.0
6 TraesCS3D01G104700 chr3B 91.667 480 15 12 1042 1503 90149765 90150237 2.590000e-180 641.0
7 TraesCS3D01G104700 chr3B 84.466 309 36 9 2556 2864 90156460 90156756 8.360000e-76 294.0
8 TraesCS3D01G104700 chr3B 78.947 342 57 6 1171 1499 455509704 455510043 5.180000e-53 219.0
9 TraesCS3D01G104700 chr3B 78.841 345 58 6 1171 1502 463458212 463457870 5.180000e-53 219.0
10 TraesCS3D01G104700 chr3B 89.024 164 18 0 505 668 90149465 90149628 1.450000e-48 204.0
11 TraesCS3D01G104700 chr3B 92.466 146 5 5 2284 2425 90156257 90156400 1.450000e-48 204.0
12 TraesCS3D01G104700 chr3B 91.367 139 9 2 2947 3083 90157089 90156952 1.460000e-43 187.0
13 TraesCS3D01G104700 chr3B 88.889 135 11 1 2949 3083 90211025 90210895 2.460000e-36 163.0
14 TraesCS3D01G104700 chr3B 100.000 38 0 0 959 996 90149660 90149697 1.530000e-08 71.3
15 TraesCS3D01G104700 chr3B 93.333 45 3 0 794 838 786037590 786037546 1.980000e-07 67.6
16 TraesCS3D01G104700 chr3A 88.641 986 86 12 1461 2441 66405645 66404681 0.000000e+00 1177.0
17 TraesCS3D01G104700 chr3A 87.159 880 75 10 1042 1920 66260770 66261612 0.000000e+00 965.0
18 TraesCS3D01G104700 chr3A 91.837 392 23 6 2559 2946 66373588 66373202 3.500000e-149 538.0
19 TraesCS3D01G104700 chr3A 92.560 336 15 4 2756 3083 66364974 66364641 1.000000e-129 473.0
20 TraesCS3D01G104700 chr3A 90.028 351 23 7 30 373 66248270 66248615 7.840000e-121 444.0
21 TraesCS3D01G104700 chr3A 84.950 299 28 2 1042 1323 66435121 66434823 1.400000e-73 287.0
22 TraesCS3D01G104700 chr3A 87.500 248 22 4 433 674 66365744 66365500 8.420000e-71 278.0
23 TraesCS3D01G104700 chr3A 89.941 169 11 2 2559 2727 66365134 66364972 2.410000e-51 213.0
24 TraesCS3D01G104700 chr3A 93.431 137 4 3 2951 3083 66368488 66368353 6.740000e-47 198.0
25 TraesCS3D01G104700 chr3A 86.022 186 22 3 1921 2102 66270592 66270777 2.430000e-46 196.0
26 TraesCS3D01G104700 chr3A 92.199 141 8 3 1319 1458 66411523 66411385 2.430000e-46 196.0
27 TraesCS3D01G104700 chr3A 88.276 145 9 3 2947 3083 66270787 66270931 1.900000e-37 167.0
28 TraesCS3D01G104700 chr3A 79.487 195 22 16 72 264 462051811 462051633 4.170000e-24 122.0
29 TraesCS3D01G104700 chr3A 83.333 132 15 6 147 276 538322790 538322664 6.990000e-22 115.0
30 TraesCS3D01G104700 chr3A 93.023 43 1 2 2499 2540 26400577 26400618 9.230000e-06 62.1
31 TraesCS3D01G104700 chr2B 77.101 1297 212 52 1086 2357 775770953 775769717 0.000000e+00 671.0
32 TraesCS3D01G104700 chr2B 81.174 494 76 11 1086 1564 775741742 775741251 6.240000e-102 381.0
33 TraesCS3D01G104700 chr2B 78.058 556 100 13 1808 2356 775740767 775740227 6.370000e-87 331.0
34 TraesCS3D01G104700 chr2B 83.908 87 7 1 878 957 712786551 712786637 3.300000e-10 76.8
35 TraesCS3D01G104700 chr2A 77.138 1111 178 52 1267 2356 759590071 759589016 2.670000e-160 575.0
36 TraesCS3D01G104700 chr2A 83.125 160 25 2 687 845 78534409 78534251 8.910000e-31 145.0
37 TraesCS3D01G104700 chr2A 90.909 77 7 0 764 840 624950851 624950927 1.510000e-18 104.0
38 TraesCS3D01G104700 chr2A 83.333 90 8 3 874 957 79496766 79496854 3.300000e-10 76.8
39 TraesCS3D01G104700 chr2D 85.000 340 38 8 1 338 73139082 73139410 1.770000e-87 333.0
40 TraesCS3D01G104700 chr7A 79.009 343 61 3 1171 1502 471814254 471813912 1.110000e-54 224.0
41 TraesCS3D01G104700 chr7A 81.765 170 26 5 147 314 461205071 461204905 1.490000e-28 137.0
42 TraesCS3D01G104700 chr4A 86.321 212 21 5 242 445 593491838 593492049 1.110000e-54 224.0
43 TraesCS3D01G104700 chr4A 89.815 108 11 0 729 836 73138412 73138519 4.150000e-29 139.0
44 TraesCS3D01G104700 chr4A 88.000 75 7 1 885 957 500148081 500148155 1.520000e-13 87.9
45 TraesCS3D01G104700 chr1A 84.066 182 17 3 671 840 29215154 29215335 6.840000e-37 165.0
46 TraesCS3D01G104700 chr1A 89.474 95 10 0 746 840 54021951 54021857 1.500000e-23 121.0
47 TraesCS3D01G104700 chr6A 85.714 154 22 0 687 840 53852808 53852655 2.460000e-36 163.0
48 TraesCS3D01G104700 chr6A 83.832 167 24 3 149 314 360614618 360614782 4.120000e-34 156.0
49 TraesCS3D01G104700 chr5D 83.607 183 18 6 172 350 306791333 306791159 8.850000e-36 161.0
50 TraesCS3D01G104700 chr5D 86.517 89 5 1 882 963 174013365 174013453 1.180000e-14 91.6
51 TraesCS3D01G104700 chr5D 85.227 88 6 1 880 960 514202115 514202028 1.970000e-12 84.2
52 TraesCS3D01G104700 chr4D 84.118 170 22 4 148 314 509604867 509605034 3.180000e-35 159.0
53 TraesCS3D01G104700 chr1D 80.349 229 23 13 139 363 253214517 253214727 1.480000e-33 154.0
54 TraesCS3D01G104700 chr5B 81.287 171 25 6 147 314 83507151 83506985 6.940000e-27 132.0
55 TraesCS3D01G104700 chr7D 79.474 190 23 10 662 838 578816938 578817124 1.500000e-23 121.0
56 TraesCS3D01G104700 chr7B 83.838 99 9 1 878 969 366055517 366055419 1.520000e-13 87.9
57 TraesCS3D01G104700 chr7B 85.556 90 5 2 878 960 658355299 658355211 1.520000e-13 87.9
58 TraesCS3D01G104700 chr4B 85.393 89 6 1 881 962 33179654 33179566 5.480000e-13 86.1
59 TraesCS3D01G104700 chr1B 78.512 121 17 7 881 993 304520435 304520316 1.530000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G104700 chr3D 57174137 57177219 3082 False 5694.000 5694 100.00000 1 3083 1 chr3D.!!$F1 3082
1 TraesCS3D01G104700 chr3D 57387645 57392939 5294 True 1131.500 1354 89.33600 1042 2845 2 chr3D.!!$R2 1803
2 TraesCS3D01G104700 chr3B 90210895 90212813 1918 True 937.000 1711 88.91950 1011 3083 2 chr3B.!!$R4 2072
3 TraesCS3D01G104700 chr3B 90149465 90150913 1448 False 436.575 830 92.34725 505 2278 4 chr3B.!!$F2 1773
4 TraesCS3D01G104700 chr3A 66404681 66405645 964 True 1177.000 1177 88.64100 1461 2441 1 chr3A.!!$R2 980
5 TraesCS3D01G104700 chr3A 66260770 66261612 842 False 965.000 965 87.15900 1042 1920 1 chr3A.!!$F3 878
6 TraesCS3D01G104700 chr3A 66364641 66368488 3847 True 290.500 473 90.85800 433 3083 4 chr3A.!!$R7 2650
7 TraesCS3D01G104700 chr2B 775769717 775770953 1236 True 671.000 671 77.10100 1086 2357 1 chr2B.!!$R1 1271
8 TraesCS3D01G104700 chr2B 775740227 775741742 1515 True 356.000 381 79.61600 1086 2356 2 chr2B.!!$R2 1270
9 TraesCS3D01G104700 chr2A 759589016 759590071 1055 True 575.000 575 77.13800 1267 2356 1 chr2A.!!$R2 1089

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
20 21 0.036765 TTCTTGAACCGTCGGATGGG 60.037 55.0 20.51 8.67 0.00 4.00 F
347 348 0.174617 CTTCCTTCTCCCAGCGAGTC 59.825 60.0 0.00 0.00 39.84 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1926 8157 0.179059 TCGCAAAGGTCAGCAGTTGA 60.179 50.0 0.0 0.0 0.00 3.18 R
2282 8541 0.706433 ACATGAGCCCTTTGGTCCAT 59.294 50.0 0.0 0.0 40.88 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.024176 ATTCTTGAACCGTCGGATGG 57.976 50.000 20.51 14.72 0.00 3.51
20 21 0.036765 TTCTTGAACCGTCGGATGGG 60.037 55.000 20.51 8.67 0.00 4.00
21 22 0.901114 TCTTGAACCGTCGGATGGGA 60.901 55.000 20.51 6.46 0.00 4.37
23 24 0.397187 TTGAACCGTCGGATGGGAAA 59.603 50.000 20.51 8.48 0.00 3.13
24 25 0.616371 TGAACCGTCGGATGGGAAAT 59.384 50.000 20.51 3.80 0.00 2.17
27 28 0.616371 ACCGTCGGATGGGAAATCAA 59.384 50.000 20.51 0.00 0.00 2.57
28 29 1.211949 ACCGTCGGATGGGAAATCAAT 59.788 47.619 20.51 0.00 0.00 2.57
29 30 1.603802 CCGTCGGATGGGAAATCAATG 59.396 52.381 4.91 0.00 0.00 2.82
30 31 1.603802 CGTCGGATGGGAAATCAATGG 59.396 52.381 0.00 0.00 0.00 3.16
31 32 1.338020 GTCGGATGGGAAATCAATGGC 59.662 52.381 0.00 0.00 0.00 4.40
32 33 0.675633 CGGATGGGAAATCAATGGCC 59.324 55.000 0.00 0.00 0.00 5.36
35 36 3.303462 TGGGAAATCAATGGCCCAG 57.697 52.632 0.00 0.00 45.31 4.45
36 37 0.709397 TGGGAAATCAATGGCCCAGA 59.291 50.000 0.00 0.00 45.31 3.86
37 38 1.342275 TGGGAAATCAATGGCCCAGAG 60.342 52.381 0.00 0.00 45.31 3.35
38 39 1.342374 GGGAAATCAATGGCCCAGAGT 60.342 52.381 0.00 0.00 40.39 3.24
39 40 2.027385 GGAAATCAATGGCCCAGAGTC 58.973 52.381 0.00 0.00 0.00 3.36
40 41 2.357569 GGAAATCAATGGCCCAGAGTCT 60.358 50.000 0.00 0.00 0.00 3.24
42 43 3.463048 AATCAATGGCCCAGAGTCTTT 57.537 42.857 0.00 0.00 0.00 2.52
43 44 2.978156 TCAATGGCCCAGAGTCTTTT 57.022 45.000 0.00 0.00 0.00 2.27
65 66 5.359194 TTTCAACCTCTGGACATATCTCC 57.641 43.478 0.00 0.00 0.00 3.71
66 67 4.271807 TCAACCTCTGGACATATCTCCT 57.728 45.455 0.00 0.00 0.00 3.69
67 68 4.624913 TCAACCTCTGGACATATCTCCTT 58.375 43.478 0.00 0.00 0.00 3.36
68 69 4.651503 TCAACCTCTGGACATATCTCCTTC 59.348 45.833 0.00 0.00 0.00 3.46
69 70 3.582164 ACCTCTGGACATATCTCCTTCC 58.418 50.000 0.00 0.00 0.00 3.46
71 72 4.230455 CCTCTGGACATATCTCCTTCCTT 58.770 47.826 0.00 0.00 0.00 3.36
72 73 4.040217 CCTCTGGACATATCTCCTTCCTTG 59.960 50.000 0.00 0.00 0.00 3.61
73 74 4.883759 TCTGGACATATCTCCTTCCTTGA 58.116 43.478 0.00 0.00 0.00 3.02
74 75 4.898265 TCTGGACATATCTCCTTCCTTGAG 59.102 45.833 0.00 0.00 0.00 3.02
75 76 3.389329 TGGACATATCTCCTTCCTTGAGC 59.611 47.826 0.00 0.00 0.00 4.26
76 77 3.244387 GGACATATCTCCTTCCTTGAGCC 60.244 52.174 0.00 0.00 0.00 4.70
77 78 2.366916 ACATATCTCCTTCCTTGAGCCG 59.633 50.000 0.00 0.00 0.00 5.52
78 79 0.753262 TATCTCCTTCCTTGAGCCGC 59.247 55.000 0.00 0.00 0.00 6.53
79 80 1.977293 ATCTCCTTCCTTGAGCCGCC 61.977 60.000 0.00 0.00 0.00 6.13
81 82 2.437359 CCTTCCTTGAGCCGCCAG 60.437 66.667 0.00 0.00 0.00 4.85
82 83 2.348998 CTTCCTTGAGCCGCCAGT 59.651 61.111 0.00 0.00 0.00 4.00
85 86 1.841302 TTCCTTGAGCCGCCAGTCAT 61.841 55.000 0.00 0.00 0.00 3.06
86 87 1.817099 CCTTGAGCCGCCAGTCATC 60.817 63.158 0.00 0.00 0.00 2.92
88 89 1.364626 CTTGAGCCGCCAGTCATCAC 61.365 60.000 0.00 0.00 0.00 3.06
98 99 2.029838 CAGTCATCACTGGCCTAACC 57.970 55.000 3.32 0.00 45.75 2.85
99 100 0.537188 AGTCATCACTGGCCTAACCG 59.463 55.000 3.32 0.00 43.94 4.44
100 101 1.090052 GTCATCACTGGCCTAACCGC 61.090 60.000 3.32 0.00 43.94 5.68
168 169 4.452733 CGCCCTCCTCGGAACCAC 62.453 72.222 0.00 0.00 33.16 4.16
170 171 2.284699 CCCTCCTCGGAACCACCT 60.285 66.667 0.00 0.00 36.31 4.00
171 172 2.359967 CCCTCCTCGGAACCACCTC 61.360 68.421 0.00 0.00 36.31 3.85
172 173 2.359967 CCTCCTCGGAACCACCTCC 61.360 68.421 0.00 0.00 36.31 4.30
173 174 2.284405 TCCTCGGAACCACCTCCC 60.284 66.667 0.00 0.00 36.31 4.30
174 175 2.606519 CCTCGGAACCACCTCCCA 60.607 66.667 0.00 0.00 36.31 4.37
175 176 2.663196 CTCGGAACCACCTCCCAC 59.337 66.667 0.00 0.00 36.31 4.61
176 177 2.926242 TCGGAACCACCTCCCACC 60.926 66.667 0.00 0.00 36.31 4.61
177 178 4.388499 CGGAACCACCTCCCACCG 62.388 72.222 0.00 0.00 36.31 4.94
178 179 4.717313 GGAACCACCTCCCACCGC 62.717 72.222 0.00 0.00 35.41 5.68
179 180 4.717313 GAACCACCTCCCACCGCC 62.717 72.222 0.00 0.00 0.00 6.13
208 209 2.448542 GCCCTGGCCATCCCTCTA 60.449 66.667 5.51 0.00 34.56 2.43
209 210 2.524204 GCCCTGGCCATCCCTCTAG 61.524 68.421 5.51 0.00 34.56 2.43
210 211 1.845205 CCCTGGCCATCCCTCTAGG 60.845 68.421 5.51 0.00 0.00 3.02
220 221 4.860881 CCTCTAGGGCCCCTCGCA 62.861 72.222 21.43 0.00 40.31 5.10
221 222 3.541713 CTCTAGGGCCCCTCGCAC 61.542 72.222 21.43 0.00 43.45 5.34
228 229 4.400961 GCCCCTCGCACTGAGCTT 62.401 66.667 0.00 0.00 43.82 3.74
231 232 0.890996 CCCCTCGCACTGAGCTTTTT 60.891 55.000 0.00 0.00 43.82 1.94
233 234 1.517242 CCTCGCACTGAGCTTTTTCT 58.483 50.000 0.00 0.00 43.82 2.52
234 235 1.876156 CCTCGCACTGAGCTTTTTCTT 59.124 47.619 0.00 0.00 43.82 2.52
235 236 2.096019 CCTCGCACTGAGCTTTTTCTTC 60.096 50.000 0.00 0.00 43.82 2.87
237 238 1.398960 CGCACTGAGCTTTTTCTTCGG 60.399 52.381 0.00 0.00 42.61 4.30
238 239 1.664302 GCACTGAGCTTTTTCTTCGGC 60.664 52.381 0.00 0.00 41.15 5.54
239 240 0.868406 ACTGAGCTTTTTCTTCGGCG 59.132 50.000 0.00 0.00 0.00 6.46
243 244 0.591659 AGCTTTTTCTTCGGCGAACC 59.408 50.000 19.83 1.45 0.00 3.62
244 245 0.386858 GCTTTTTCTTCGGCGAACCC 60.387 55.000 19.83 0.00 0.00 4.11
245 246 0.240145 CTTTTTCTTCGGCGAACCCC 59.760 55.000 19.83 0.00 0.00 4.95
246 247 1.174078 TTTTTCTTCGGCGAACCCCC 61.174 55.000 19.83 0.00 0.00 5.40
247 248 2.340673 TTTTCTTCGGCGAACCCCCA 62.341 55.000 19.83 0.00 0.00 4.96
248 249 3.540367 TTCTTCGGCGAACCCCCAC 62.540 63.158 19.83 0.00 0.00 4.61
250 251 4.629523 TTCGGCGAACCCCCACAC 62.630 66.667 19.83 0.00 0.00 3.82
292 293 2.598787 CCACCGCCCTCACCCTAAA 61.599 63.158 0.00 0.00 0.00 1.85
293 294 1.376812 CACCGCCCTCACCCTAAAC 60.377 63.158 0.00 0.00 0.00 2.01
294 295 2.271173 CCGCCCTCACCCTAAACC 59.729 66.667 0.00 0.00 0.00 3.27
295 296 2.271173 CGCCCTCACCCTAAACCC 59.729 66.667 0.00 0.00 0.00 4.11
296 297 2.298661 CGCCCTCACCCTAAACCCT 61.299 63.158 0.00 0.00 0.00 4.34
297 298 0.979187 CGCCCTCACCCTAAACCCTA 60.979 60.000 0.00 0.00 0.00 3.53
299 300 1.212195 GCCCTCACCCTAAACCCTAAG 59.788 57.143 0.00 0.00 0.00 2.18
301 302 3.394645 CCCTCACCCTAAACCCTAAGAT 58.605 50.000 0.00 0.00 0.00 2.40
302 303 4.563782 CCCTCACCCTAAACCCTAAGATA 58.436 47.826 0.00 0.00 0.00 1.98
303 304 4.593634 CCCTCACCCTAAACCCTAAGATAG 59.406 50.000 0.00 0.00 0.00 2.08
305 306 5.304871 CCTCACCCTAAACCCTAAGATAGAC 59.695 48.000 0.00 0.00 0.00 2.59
306 307 5.845734 TCACCCTAAACCCTAAGATAGACA 58.154 41.667 0.00 0.00 0.00 3.41
307 308 5.659971 TCACCCTAAACCCTAAGATAGACAC 59.340 44.000 0.00 0.00 0.00 3.67
308 309 5.661759 CACCCTAAACCCTAAGATAGACACT 59.338 44.000 0.00 0.00 0.00 3.55
310 311 5.070580 CCCTAAACCCTAAGATAGACACTGG 59.929 48.000 0.00 0.00 0.00 4.00
311 312 5.070580 CCTAAACCCTAAGATAGACACTGGG 59.929 48.000 0.00 0.00 39.06 4.45
312 313 3.047695 ACCCTAAGATAGACACTGGGG 57.952 52.381 0.00 0.00 37.56 4.96
316 317 4.227197 CCTAAGATAGACACTGGGGTGAT 58.773 47.826 3.06 0.00 45.61 3.06
317 318 4.039730 CCTAAGATAGACACTGGGGTGATG 59.960 50.000 3.06 0.00 45.61 3.07
319 320 3.034635 AGATAGACACTGGGGTGATGAC 58.965 50.000 3.06 0.00 45.61 3.06
320 321 1.182667 TAGACACTGGGGTGATGACG 58.817 55.000 3.06 0.00 45.61 4.35
321 322 1.079127 GACACTGGGGTGATGACGG 60.079 63.158 3.06 0.00 45.61 4.79
322 323 2.436646 CACTGGGGTGATGACGGC 60.437 66.667 0.00 0.00 45.61 5.68
324 325 4.838152 CTGGGGTGATGACGGCGG 62.838 72.222 13.24 0.00 0.00 6.13
337 338 4.491409 GGCGGCCCCTTCCTTCTC 62.491 72.222 8.12 0.00 0.00 2.87
338 339 4.491409 GCGGCCCCTTCCTTCTCC 62.491 72.222 0.00 0.00 0.00 3.71
339 340 3.798511 CGGCCCCTTCCTTCTCCC 61.799 72.222 0.00 0.00 0.00 4.30
340 341 2.614013 GGCCCCTTCCTTCTCCCA 60.614 66.667 0.00 0.00 0.00 4.37
341 342 2.684499 GGCCCCTTCCTTCTCCCAG 61.684 68.421 0.00 0.00 0.00 4.45
342 343 3.002371 CCCCTTCCTTCTCCCAGC 58.998 66.667 0.00 0.00 0.00 4.85
343 344 2.586792 CCCTTCCTTCTCCCAGCG 59.413 66.667 0.00 0.00 0.00 5.18
345 346 1.519719 CCTTCCTTCTCCCAGCGAG 59.480 63.158 0.00 0.00 40.30 5.03
346 347 1.261238 CCTTCCTTCTCCCAGCGAGT 61.261 60.000 0.00 0.00 39.84 4.18
347 348 0.174617 CTTCCTTCTCCCAGCGAGTC 59.825 60.000 0.00 0.00 39.84 3.36
348 349 1.258445 TTCCTTCTCCCAGCGAGTCC 61.258 60.000 0.00 0.00 39.84 3.85
349 350 2.726351 CCTTCTCCCAGCGAGTCCC 61.726 68.421 0.00 0.00 39.84 4.46
350 351 2.683933 TTCTCCCAGCGAGTCCCC 60.684 66.667 0.00 0.00 39.84 4.81
351 352 4.779733 TCTCCCAGCGAGTCCCCC 62.780 72.222 0.00 0.00 39.84 5.40
365 366 3.002371 CCCCCTTCTCCTTCCTGC 58.998 66.667 0.00 0.00 0.00 4.85
367 368 1.210885 CCCCCTTCTCCTTCCTGCTT 61.211 60.000 0.00 0.00 0.00 3.91
369 370 1.284313 CCCTTCTCCTTCCTGCTTCT 58.716 55.000 0.00 0.00 0.00 2.85
370 371 1.632920 CCCTTCTCCTTCCTGCTTCTT 59.367 52.381 0.00 0.00 0.00 2.52
371 372 2.355615 CCCTTCTCCTTCCTGCTTCTTC 60.356 54.545 0.00 0.00 0.00 2.87
372 373 2.355615 CCTTCTCCTTCCTGCTTCTTCC 60.356 54.545 0.00 0.00 0.00 3.46
373 374 2.334006 TCTCCTTCCTGCTTCTTCCT 57.666 50.000 0.00 0.00 0.00 3.36
374 375 2.625639 TCTCCTTCCTGCTTCTTCCTT 58.374 47.619 0.00 0.00 0.00 3.36
375 376 2.569404 TCTCCTTCCTGCTTCTTCCTTC 59.431 50.000 0.00 0.00 0.00 3.46
376 377 2.304180 CTCCTTCCTGCTTCTTCCTTCA 59.696 50.000 0.00 0.00 0.00 3.02
377 378 2.915604 TCCTTCCTGCTTCTTCCTTCAT 59.084 45.455 0.00 0.00 0.00 2.57
379 380 3.693578 CCTTCCTGCTTCTTCCTTCATTC 59.306 47.826 0.00 0.00 0.00 2.67
380 381 4.330250 CTTCCTGCTTCTTCCTTCATTCA 58.670 43.478 0.00 0.00 0.00 2.57
382 383 4.728772 TCCTGCTTCTTCCTTCATTCAAA 58.271 39.130 0.00 0.00 0.00 2.69
383 384 5.139727 TCCTGCTTCTTCCTTCATTCAAAA 58.860 37.500 0.00 0.00 0.00 2.44
384 385 5.598005 TCCTGCTTCTTCCTTCATTCAAAAA 59.402 36.000 0.00 0.00 0.00 1.94
385 386 6.268387 TCCTGCTTCTTCCTTCATTCAAAAAT 59.732 34.615 0.00 0.00 0.00 1.82
386 387 6.589139 CCTGCTTCTTCCTTCATTCAAAAATC 59.411 38.462 0.00 0.00 0.00 2.17
387 388 6.151691 TGCTTCTTCCTTCATTCAAAAATCG 58.848 36.000 0.00 0.00 0.00 3.34
388 389 6.016360 TGCTTCTTCCTTCATTCAAAAATCGA 60.016 34.615 0.00 0.00 0.00 3.59
391 392 8.746922 TTCTTCCTTCATTCAAAAATCGATTG 57.253 30.769 12.25 0.55 0.00 2.67
392 393 8.109705 TCTTCCTTCATTCAAAAATCGATTGA 57.890 30.769 12.25 3.37 35.11 2.57
393 394 8.023128 TCTTCCTTCATTCAAAAATCGATTGAC 58.977 33.333 12.25 0.00 36.57 3.18
396 397 5.295431 TCATTCAAAAATCGATTGACGCT 57.705 34.783 12.25 0.00 42.26 5.07
400 401 5.295431 TCAAAAATCGATTGACGCTGAAT 57.705 34.783 12.25 0.00 42.26 2.57
401 402 5.698832 TCAAAAATCGATTGACGCTGAATT 58.301 33.333 12.25 0.00 42.26 2.17
403 404 3.575858 AATCGATTGACGCTGAATTCG 57.424 42.857 10.50 0.00 42.26 3.34
404 405 2.271821 TCGATTGACGCTGAATTCGA 57.728 45.000 0.04 0.00 42.26 3.71
405 406 2.601804 TCGATTGACGCTGAATTCGAA 58.398 42.857 0.00 0.00 42.26 3.71
407 408 3.242944 TCGATTGACGCTGAATTCGAATC 59.757 43.478 11.83 5.93 42.26 2.52
408 409 3.000222 CGATTGACGCTGAATTCGAATCA 60.000 43.478 11.83 10.13 34.51 2.57
409 410 3.997319 TTGACGCTGAATTCGAATCAG 57.003 42.857 22.60 22.60 45.65 2.90
414 415 2.752144 CTGAATTCGAATCAGCTGGC 57.248 50.000 15.13 2.92 38.03 4.85
427 428 1.137675 CAGCTGGCTGATGTGTAGCTA 59.862 52.381 16.59 0.00 46.30 3.32
428 429 1.833630 AGCTGGCTGATGTGTAGCTAA 59.166 47.619 0.00 0.00 42.45 3.09
430 431 2.352960 GCTGGCTGATGTGTAGCTAAAC 59.647 50.000 7.15 7.15 40.92 2.01
432 433 3.599343 TGGCTGATGTGTAGCTAAACTG 58.401 45.455 15.14 4.52 40.92 3.16
433 434 3.260632 TGGCTGATGTGTAGCTAAACTGA 59.739 43.478 15.14 0.00 40.92 3.41
434 435 4.253685 GGCTGATGTGTAGCTAAACTGAA 58.746 43.478 15.14 0.00 40.92 3.02
435 436 4.695455 GGCTGATGTGTAGCTAAACTGAAA 59.305 41.667 15.14 0.00 40.92 2.69
436 437 5.163814 GGCTGATGTGTAGCTAAACTGAAAG 60.164 44.000 15.14 8.47 40.92 2.62
464 2777 1.136141 GTCGCGACTTCGTCAACTCTA 60.136 52.381 31.12 0.00 42.22 2.43
465 2778 1.136141 TCGCGACTTCGTCAACTCTAC 60.136 52.381 3.71 0.00 42.22 2.59
466 2779 1.136029 CGCGACTTCGTCAACTCTACT 60.136 52.381 0.00 0.00 42.22 2.57
474 2787 1.136029 CGTCAACTCTACTCGTTCGCT 60.136 52.381 0.00 0.00 0.00 4.93
486 2799 3.706373 TTCGCTGGGGCTCACTCC 61.706 66.667 0.00 0.00 36.09 3.85
536 2849 2.941720 GGCTAGTTCATCTGCTTCAAGG 59.058 50.000 0.00 0.00 0.00 3.61
567 2881 5.092554 TCCAATCTAACGGCTGATACAAA 57.907 39.130 0.00 0.00 0.00 2.83
570 2884 6.601613 TCCAATCTAACGGCTGATACAAATTT 59.398 34.615 0.00 0.00 0.00 1.82
573 2887 6.176975 TCTAACGGCTGATACAAATTTGTG 57.823 37.500 29.72 16.18 42.31 3.33
580 2894 4.021544 GCTGATACAAATTTGTGGGGAACA 60.022 41.667 29.72 15.47 42.31 3.18
591 2905 3.581101 TGTGGGGAACATGAAAAATCCA 58.419 40.909 0.00 0.00 32.36 3.41
603 2917 5.226194 TGAAAAATCCAACATTTCCCAGG 57.774 39.130 0.00 0.00 33.23 4.45
609 2923 8.442660 AAAATCCAACATTTCCCAGGTAAATA 57.557 30.769 0.00 0.00 0.00 1.40
624 2938 7.308951 CCCAGGTAAATATTCGAAACAAACTGT 60.309 37.037 0.00 0.00 0.00 3.55
638 2957 5.391312 ACAAACTGTATGGAAGCAAATCC 57.609 39.130 0.00 0.00 40.10 3.01
674 2993 1.543065 AAGCATGGCGCCCAATCAAA 61.543 50.000 26.77 2.60 44.04 2.69
675 2994 1.079266 GCATGGCGCCCAATCAAAA 60.079 52.632 26.77 1.65 36.95 2.44
676 2995 0.673022 GCATGGCGCCCAATCAAAAA 60.673 50.000 26.77 0.73 36.95 1.94
677 2996 2.013058 GCATGGCGCCCAATCAAAAAT 61.013 47.619 26.77 3.74 36.95 1.82
678 2997 1.666700 CATGGCGCCCAATCAAAAATG 59.333 47.619 26.77 13.67 36.95 2.32
679 2998 0.673022 TGGCGCCCAATCAAAAATGC 60.673 50.000 26.77 0.00 0.00 3.56
680 2999 0.391528 GGCGCCCAATCAAAAATGCT 60.392 50.000 18.11 0.00 0.00 3.79
681 3000 1.134848 GGCGCCCAATCAAAAATGCTA 60.135 47.619 18.11 0.00 0.00 3.49
682 3001 2.195922 GCGCCCAATCAAAAATGCTAG 58.804 47.619 0.00 0.00 0.00 3.42
683 3002 2.159254 GCGCCCAATCAAAAATGCTAGA 60.159 45.455 0.00 0.00 0.00 2.43
684 3003 3.438360 CGCCCAATCAAAAATGCTAGAC 58.562 45.455 0.00 0.00 0.00 2.59
685 3004 3.438360 GCCCAATCAAAAATGCTAGACG 58.562 45.455 0.00 0.00 0.00 4.18
686 3005 3.119495 GCCCAATCAAAAATGCTAGACGT 60.119 43.478 0.00 0.00 0.00 4.34
687 3006 4.095782 GCCCAATCAAAAATGCTAGACGTA 59.904 41.667 0.00 0.00 0.00 3.57
688 3007 5.569413 CCCAATCAAAAATGCTAGACGTAC 58.431 41.667 0.00 0.00 0.00 3.67
689 3008 5.123186 CCCAATCAAAAATGCTAGACGTACA 59.877 40.000 0.00 0.00 0.00 2.90
690 3009 6.250819 CCAATCAAAAATGCTAGACGTACAG 58.749 40.000 0.00 0.00 0.00 2.74
691 3010 6.128282 CCAATCAAAAATGCTAGACGTACAGT 60.128 38.462 0.00 0.00 0.00 3.55
703 3022 4.248691 GACGTACAGTCTTTTACAGGGT 57.751 45.455 9.62 0.00 46.13 4.34
704 3023 4.233005 GACGTACAGTCTTTTACAGGGTC 58.767 47.826 9.62 0.00 46.13 4.46
705 3024 3.006217 ACGTACAGTCTTTTACAGGGTCC 59.994 47.826 0.00 0.00 0.00 4.46
706 3025 3.257624 CGTACAGTCTTTTACAGGGTCCT 59.742 47.826 0.00 0.00 0.00 3.85
707 3026 4.262335 CGTACAGTCTTTTACAGGGTCCTT 60.262 45.833 0.00 0.00 0.00 3.36
708 3027 4.790718 ACAGTCTTTTACAGGGTCCTTT 57.209 40.909 0.00 0.00 0.00 3.11
709 3028 4.715713 ACAGTCTTTTACAGGGTCCTTTC 58.284 43.478 0.00 0.00 0.00 2.62
710 3029 4.165372 ACAGTCTTTTACAGGGTCCTTTCA 59.835 41.667 0.00 0.00 0.00 2.69
711 3030 5.130350 CAGTCTTTTACAGGGTCCTTTCAA 58.870 41.667 0.00 0.00 0.00 2.69
712 3031 5.592688 CAGTCTTTTACAGGGTCCTTTCAAA 59.407 40.000 0.00 0.00 0.00 2.69
713 3032 5.593095 AGTCTTTTACAGGGTCCTTTCAAAC 59.407 40.000 0.00 0.00 0.00 2.93
714 3033 5.593095 GTCTTTTACAGGGTCCTTTCAAACT 59.407 40.000 0.00 0.00 0.00 2.66
715 3034 6.096423 GTCTTTTACAGGGTCCTTTCAAACTT 59.904 38.462 0.00 0.00 0.00 2.66
716 3035 6.666113 TCTTTTACAGGGTCCTTTCAAACTTT 59.334 34.615 0.00 0.00 0.00 2.66
717 3036 6.459670 TTTACAGGGTCCTTTCAAACTTTC 57.540 37.500 0.00 0.00 0.00 2.62
718 3037 3.296854 ACAGGGTCCTTTCAAACTTTCC 58.703 45.455 0.00 0.00 0.00 3.13
719 3038 3.295973 CAGGGTCCTTTCAAACTTTCCA 58.704 45.455 0.00 0.00 0.00 3.53
720 3039 3.704061 CAGGGTCCTTTCAAACTTTCCAA 59.296 43.478 0.00 0.00 0.00 3.53
721 3040 4.161377 CAGGGTCCTTTCAAACTTTCCAAA 59.839 41.667 0.00 0.00 0.00 3.28
722 3041 4.968719 AGGGTCCTTTCAAACTTTCCAAAT 59.031 37.500 0.00 0.00 0.00 2.32
723 3042 6.041523 CAGGGTCCTTTCAAACTTTCCAAATA 59.958 38.462 0.00 0.00 0.00 1.40
724 3043 6.041637 AGGGTCCTTTCAAACTTTCCAAATAC 59.958 38.462 0.00 0.00 0.00 1.89
725 3044 6.183360 GGGTCCTTTCAAACTTTCCAAATACA 60.183 38.462 0.00 0.00 0.00 2.29
726 3045 7.441836 GGTCCTTTCAAACTTTCCAAATACAT 58.558 34.615 0.00 0.00 0.00 2.29
727 3046 7.598869 GGTCCTTTCAAACTTTCCAAATACATC 59.401 37.037 0.00 0.00 0.00 3.06
728 3047 7.598869 GTCCTTTCAAACTTTCCAAATACATCC 59.401 37.037 0.00 0.00 0.00 3.51
729 3048 6.873605 CCTTTCAAACTTTCCAAATACATCCC 59.126 38.462 0.00 0.00 0.00 3.85
730 3049 5.993748 TCAAACTTTCCAAATACATCCCC 57.006 39.130 0.00 0.00 0.00 4.81
731 3050 5.650283 TCAAACTTTCCAAATACATCCCCT 58.350 37.500 0.00 0.00 0.00 4.79
732 3051 5.480073 TCAAACTTTCCAAATACATCCCCTG 59.520 40.000 0.00 0.00 0.00 4.45
733 3052 4.946160 ACTTTCCAAATACATCCCCTGA 57.054 40.909 0.00 0.00 0.00 3.86
734 3053 5.472301 ACTTTCCAAATACATCCCCTGAT 57.528 39.130 0.00 0.00 0.00 2.90
735 3054 5.842339 ACTTTCCAAATACATCCCCTGATT 58.158 37.500 0.00 0.00 0.00 2.57
736 3055 6.263754 ACTTTCCAAATACATCCCCTGATTT 58.736 36.000 0.00 0.00 0.00 2.17
737 3056 6.155049 ACTTTCCAAATACATCCCCTGATTTG 59.845 38.462 0.00 0.00 38.46 2.32
738 3057 5.464588 TCCAAATACATCCCCTGATTTGA 57.535 39.130 7.57 0.00 40.25 2.69
739 3058 5.836705 TCCAAATACATCCCCTGATTTGAA 58.163 37.500 7.57 0.00 40.25 2.69
740 3059 6.442961 TCCAAATACATCCCCTGATTTGAAT 58.557 36.000 7.57 0.00 40.25 2.57
741 3060 6.324512 TCCAAATACATCCCCTGATTTGAATG 59.675 38.462 7.57 0.00 40.25 2.67
742 3061 6.463331 CCAAATACATCCCCTGATTTGAATGG 60.463 42.308 7.57 0.00 40.25 3.16
743 3062 5.668135 ATACATCCCCTGATTTGAATGGA 57.332 39.130 0.00 0.00 0.00 3.41
744 3063 4.335735 ACATCCCCTGATTTGAATGGAA 57.664 40.909 0.00 0.00 0.00 3.53
745 3064 4.284178 ACATCCCCTGATTTGAATGGAAG 58.716 43.478 0.00 0.00 0.00 3.46
746 3065 4.264532 ACATCCCCTGATTTGAATGGAAGT 60.265 41.667 0.00 0.00 0.00 3.01
747 3066 3.700538 TCCCCTGATTTGAATGGAAGTG 58.299 45.455 0.00 0.00 0.00 3.16
748 3067 2.762327 CCCCTGATTTGAATGGAAGTGG 59.238 50.000 0.00 0.00 0.00 4.00
749 3068 2.762327 CCCTGATTTGAATGGAAGTGGG 59.238 50.000 0.00 0.00 0.00 4.61
750 3069 2.167075 CCTGATTTGAATGGAAGTGGGC 59.833 50.000 0.00 0.00 0.00 5.36
751 3070 2.167075 CTGATTTGAATGGAAGTGGGCC 59.833 50.000 0.00 0.00 0.00 5.80
752 3071 1.482182 GATTTGAATGGAAGTGGGCCC 59.518 52.381 17.59 17.59 0.00 5.80
753 3072 0.897863 TTTGAATGGAAGTGGGCCCG 60.898 55.000 19.37 0.00 0.00 6.13
754 3073 2.075355 TTGAATGGAAGTGGGCCCGT 62.075 55.000 19.37 3.32 0.00 5.28
755 3074 2.035626 AATGGAAGTGGGCCCGTG 59.964 61.111 19.37 0.00 0.00 4.94
756 3075 4.740822 ATGGAAGTGGGCCCGTGC 62.741 66.667 19.37 11.05 0.00 5.34
770 3089 3.072211 GCCCGTGCCTCTATTAATAACC 58.928 50.000 0.00 0.00 0.00 2.85
771 3090 3.495453 GCCCGTGCCTCTATTAATAACCA 60.495 47.826 0.00 0.00 0.00 3.67
772 3091 4.710324 CCCGTGCCTCTATTAATAACCAA 58.290 43.478 0.00 0.00 0.00 3.67
773 3092 5.313712 CCCGTGCCTCTATTAATAACCAAT 58.686 41.667 0.00 0.00 0.00 3.16
774 3093 5.768164 CCCGTGCCTCTATTAATAACCAATT 59.232 40.000 0.00 0.00 0.00 2.32
775 3094 6.938030 CCCGTGCCTCTATTAATAACCAATTA 59.062 38.462 0.00 0.00 0.00 1.40
776 3095 7.446013 CCCGTGCCTCTATTAATAACCAATTAA 59.554 37.037 0.00 0.00 42.73 1.40
777 3096 8.842280 CCGTGCCTCTATTAATAACCAATTAAA 58.158 33.333 0.00 0.00 42.04 1.52
793 3112 9.744468 AACCAATTAAAAACTATCACAACACTC 57.256 29.630 0.00 0.00 0.00 3.51
794 3113 9.131791 ACCAATTAAAAACTATCACAACACTCT 57.868 29.630 0.00 0.00 0.00 3.24
795 3114 9.398170 CCAATTAAAAACTATCACAACACTCTG 57.602 33.333 0.00 0.00 0.00 3.35
796 3115 9.950680 CAATTAAAAACTATCACAACACTCTGT 57.049 29.630 0.00 0.00 0.00 3.41
801 3120 7.907214 AAACTATCACAACACTCTGTAATCC 57.093 36.000 0.00 0.00 0.00 3.01
802 3121 5.978814 ACTATCACAACACTCTGTAATCCC 58.021 41.667 0.00 0.00 0.00 3.85
803 3122 3.695830 TCACAACACTCTGTAATCCCC 57.304 47.619 0.00 0.00 0.00 4.81
804 3123 3.248024 TCACAACACTCTGTAATCCCCT 58.752 45.455 0.00 0.00 0.00 4.79
805 3124 3.260884 TCACAACACTCTGTAATCCCCTC 59.739 47.826 0.00 0.00 0.00 4.30
806 3125 3.007940 CACAACACTCTGTAATCCCCTCA 59.992 47.826 0.00 0.00 0.00 3.86
807 3126 3.846588 ACAACACTCTGTAATCCCCTCAT 59.153 43.478 0.00 0.00 0.00 2.90
808 3127 4.080863 ACAACACTCTGTAATCCCCTCATC 60.081 45.833 0.00 0.00 0.00 2.92
809 3128 3.041946 ACACTCTGTAATCCCCTCATCC 58.958 50.000 0.00 0.00 0.00 3.51
810 3129 2.370189 CACTCTGTAATCCCCTCATCCC 59.630 54.545 0.00 0.00 0.00 3.85
811 3130 2.251338 ACTCTGTAATCCCCTCATCCCT 59.749 50.000 0.00 0.00 0.00 4.20
812 3131 2.636893 CTCTGTAATCCCCTCATCCCTG 59.363 54.545 0.00 0.00 0.00 4.45
813 3132 2.022035 TCTGTAATCCCCTCATCCCTGT 60.022 50.000 0.00 0.00 0.00 4.00
814 3133 3.208922 TCTGTAATCCCCTCATCCCTGTA 59.791 47.826 0.00 0.00 0.00 2.74
815 3134 3.973973 CTGTAATCCCCTCATCCCTGTAA 59.026 47.826 0.00 0.00 0.00 2.41
816 3135 3.714798 TGTAATCCCCTCATCCCTGTAAC 59.285 47.826 0.00 0.00 0.00 2.50
817 3136 2.587060 ATCCCCTCATCCCTGTAACA 57.413 50.000 0.00 0.00 0.00 2.41
818 3137 2.587060 TCCCCTCATCCCTGTAACAT 57.413 50.000 0.00 0.00 0.00 2.71
819 3138 2.408565 TCCCCTCATCCCTGTAACATC 58.591 52.381 0.00 0.00 0.00 3.06
820 3139 1.421646 CCCCTCATCCCTGTAACATCC 59.578 57.143 0.00 0.00 0.00 3.51
821 3140 2.412591 CCCTCATCCCTGTAACATCCT 58.587 52.381 0.00 0.00 0.00 3.24
822 3141 2.105477 CCCTCATCCCTGTAACATCCTG 59.895 54.545 0.00 0.00 0.00 3.86
823 3142 2.774234 CCTCATCCCTGTAACATCCTGT 59.226 50.000 0.00 0.00 0.00 4.00
824 3143 3.967326 CCTCATCCCTGTAACATCCTGTA 59.033 47.826 0.00 0.00 0.00 2.74
825 3144 4.202264 CCTCATCCCTGTAACATCCTGTAC 60.202 50.000 0.00 0.00 0.00 2.90
826 3145 3.383505 TCATCCCTGTAACATCCTGTACG 59.616 47.826 0.00 0.00 0.00 3.67
827 3146 2.811410 TCCCTGTAACATCCTGTACGT 58.189 47.619 0.00 0.00 0.00 3.57
828 3147 2.494471 TCCCTGTAACATCCTGTACGTG 59.506 50.000 0.00 0.00 0.00 4.49
829 3148 2.232941 CCCTGTAACATCCTGTACGTGT 59.767 50.000 0.00 0.00 0.00 4.49
830 3149 3.444742 CCCTGTAACATCCTGTACGTGTA 59.555 47.826 0.00 0.00 0.00 2.90
831 3150 4.439700 CCCTGTAACATCCTGTACGTGTAG 60.440 50.000 0.00 0.00 0.00 2.74
832 3151 4.100707 TGTAACATCCTGTACGTGTAGC 57.899 45.455 0.00 0.00 0.00 3.58
833 3152 3.506844 TGTAACATCCTGTACGTGTAGCA 59.493 43.478 0.00 0.00 0.00 3.49
834 3153 3.671008 AACATCCTGTACGTGTAGCAA 57.329 42.857 0.00 0.00 0.00 3.91
835 3154 3.671008 ACATCCTGTACGTGTAGCAAA 57.329 42.857 0.00 0.00 0.00 3.68
836 3155 3.585862 ACATCCTGTACGTGTAGCAAAG 58.414 45.455 0.00 0.00 0.00 2.77
837 3156 2.074547 TCCTGTACGTGTAGCAAAGC 57.925 50.000 0.00 0.00 0.00 3.51
838 3157 1.616865 TCCTGTACGTGTAGCAAAGCT 59.383 47.619 0.00 0.00 43.41 3.74
839 3158 1.993370 CCTGTACGTGTAGCAAAGCTC 59.007 52.381 0.00 0.00 40.44 4.09
840 3159 1.649171 CTGTACGTGTAGCAAAGCTCG 59.351 52.381 0.00 0.00 40.44 5.03
841 3160 0.365859 GTACGTGTAGCAAAGCTCGC 59.634 55.000 0.00 0.00 40.44 5.03
842 3161 1.068832 TACGTGTAGCAAAGCTCGCG 61.069 55.000 0.00 0.00 41.48 5.87
843 3162 2.096594 GTGTAGCAAAGCTCGCGC 59.903 61.111 0.00 0.00 40.44 6.86
844 3163 3.118454 TGTAGCAAAGCTCGCGCC 61.118 61.111 0.00 0.00 40.44 6.53
845 3164 3.865830 GTAGCAAAGCTCGCGCCC 61.866 66.667 0.00 0.00 40.44 6.13
846 3165 4.386951 TAGCAAAGCTCGCGCCCA 62.387 61.111 0.00 0.00 40.44 5.36
878 3197 7.392673 CGCCCTGATTTATAGGAGTAGTAGTTA 59.607 40.741 0.00 0.00 37.52 2.24
879 3198 8.522003 GCCCTGATTTATAGGAGTAGTAGTTAC 58.478 40.741 0.00 0.00 37.52 2.50
880 3199 8.728833 CCCTGATTTATAGGAGTAGTAGTTACG 58.271 40.741 0.00 0.00 37.52 3.18
891 3210 2.911484 AGTAGTTACGTACTCCCTCCG 58.089 52.381 0.00 0.00 38.33 4.63
892 3211 2.237392 AGTAGTTACGTACTCCCTCCGT 59.763 50.000 0.00 0.00 38.33 4.69
893 3212 2.206576 AGTTACGTACTCCCTCCGTT 57.793 50.000 0.00 0.00 36.12 4.44
894 3213 2.087646 AGTTACGTACTCCCTCCGTTC 58.912 52.381 0.00 0.00 36.12 3.95
895 3214 1.133216 GTTACGTACTCCCTCCGTTCC 59.867 57.143 0.00 0.00 36.12 3.62
897 3216 0.540365 ACGTACTCCCTCCGTTCCAA 60.540 55.000 0.00 0.00 0.00 3.53
898 3217 0.604578 CGTACTCCCTCCGTTCCAAA 59.395 55.000 0.00 0.00 0.00 3.28
900 3219 2.354403 CGTACTCCCTCCGTTCCAAAAT 60.354 50.000 0.00 0.00 0.00 1.82
901 3220 3.119029 CGTACTCCCTCCGTTCCAAAATA 60.119 47.826 0.00 0.00 0.00 1.40
902 3221 4.621274 CGTACTCCCTCCGTTCCAAAATAA 60.621 45.833 0.00 0.00 0.00 1.40
904 3223 4.930696 ACTCCCTCCGTTCCAAAATAAAT 58.069 39.130 0.00 0.00 0.00 1.40
907 3226 5.515106 TCCCTCCGTTCCAAAATAAATGAT 58.485 37.500 0.00 0.00 0.00 2.45
908 3227 5.592688 TCCCTCCGTTCCAAAATAAATGATC 59.407 40.000 0.00 0.00 0.00 2.92
909 3228 5.221244 CCCTCCGTTCCAAAATAAATGATCC 60.221 44.000 0.00 0.00 0.00 3.36
910 3229 5.359576 CCTCCGTTCCAAAATAAATGATCCA 59.640 40.000 0.00 0.00 0.00 3.41
912 3231 6.626302 TCCGTTCCAAAATAAATGATCCAAC 58.374 36.000 0.00 0.00 0.00 3.77
913 3232 6.435904 TCCGTTCCAAAATAAATGATCCAACT 59.564 34.615 0.00 0.00 0.00 3.16
914 3233 7.039363 TCCGTTCCAAAATAAATGATCCAACTT 60.039 33.333 0.00 0.00 0.00 2.66
915 3234 7.602265 CCGTTCCAAAATAAATGATCCAACTTT 59.398 33.333 0.00 0.00 0.00 2.66
916 3235 9.632807 CGTTCCAAAATAAATGATCCAACTTTA 57.367 29.630 0.00 0.00 0.00 1.85
946 3265 7.703058 ACTCTAGTTGGGTCATTTATTTTGG 57.297 36.000 0.00 0.00 0.00 3.28
947 3266 7.466804 ACTCTAGTTGGGTCATTTATTTTGGA 58.533 34.615 0.00 0.00 0.00 3.53
948 3267 7.947890 ACTCTAGTTGGGTCATTTATTTTGGAA 59.052 33.333 0.00 0.00 0.00 3.53
949 3268 8.117813 TCTAGTTGGGTCATTTATTTTGGAAC 57.882 34.615 0.00 0.00 0.00 3.62
952 3271 4.408276 TGGGTCATTTATTTTGGAACGGA 58.592 39.130 0.00 0.00 0.00 4.69
953 3272 4.461081 TGGGTCATTTATTTTGGAACGGAG 59.539 41.667 0.00 0.00 0.00 4.63
954 3273 4.142249 GGGTCATTTATTTTGGAACGGAGG 60.142 45.833 0.00 0.00 0.00 4.30
955 3274 4.142249 GGTCATTTATTTTGGAACGGAGGG 60.142 45.833 0.00 0.00 0.00 4.30
956 3275 4.703093 GTCATTTATTTTGGAACGGAGGGA 59.297 41.667 0.00 0.00 0.00 4.20
957 3276 5.184287 GTCATTTATTTTGGAACGGAGGGAA 59.816 40.000 0.00 0.00 0.00 3.97
996 3315 1.237285 ATTTGGTGCAGAGTCACGCC 61.237 55.000 8.44 8.44 37.83 5.68
997 3316 3.825160 TTGGTGCAGAGTCACGCCC 62.825 63.158 11.89 8.51 37.83 6.13
1038 3387 2.099141 TCCTTCGCAGGATGTCAAAG 57.901 50.000 0.00 0.00 45.20 2.77
1039 3388 1.623311 TCCTTCGCAGGATGTCAAAGA 59.377 47.619 0.00 0.00 45.20 2.52
1040 3389 1.734465 CCTTCGCAGGATGTCAAAGAC 59.266 52.381 0.00 0.00 44.19 3.01
1048 3397 3.190118 CAGGATGTCAAAGACTCAAAGCC 59.810 47.826 0.00 0.00 33.15 4.35
1172 3533 4.814294 GTCCTTGACGCCGCGGAT 62.814 66.667 33.48 17.16 0.00 4.18
1728 4118 2.688477 CTCTTCCAAGGGAGGCTCTAT 58.312 52.381 15.23 0.00 31.21 1.98
1920 8151 3.670377 GTCCGGGCAAGCACAACC 61.670 66.667 0.00 0.00 0.00 3.77
1921 8152 4.196778 TCCGGGCAAGCACAACCA 62.197 61.111 0.00 0.00 0.00 3.67
1926 8157 2.412937 GCAAGCACAACCAAGCGT 59.587 55.556 0.00 0.00 35.48 5.07
1933 8164 0.592247 CACAACCAAGCGTCAACTGC 60.592 55.000 0.00 0.00 0.00 4.40
2111 8359 0.824109 CCATCTACTTCTCCACGCCA 59.176 55.000 0.00 0.00 0.00 5.69
2282 8541 1.371183 CTTCTGCCACCCTCGTGAA 59.629 57.895 0.00 0.00 43.14 3.18
2343 8602 5.310409 ACCTGAATCTTTCAAGGAACTGA 57.690 39.130 10.63 0.00 40.86 3.41
2348 8610 6.000219 TGAATCTTTCAAGGAACTGAGGAAG 59.000 40.000 0.00 0.00 40.86 3.46
2360 8622 0.826715 TGAGGAAGAAGATCAGGGCG 59.173 55.000 0.00 0.00 0.00 6.13
2368 8630 2.167487 AGAAGATCAGGGCGAAAGACTC 59.833 50.000 0.00 0.00 40.87 3.36
2508 8863 6.258947 GGACAAGATGTCTCCTTAAATGCTAC 59.741 42.308 10.06 0.00 46.19 3.58
2509 8864 6.951971 ACAAGATGTCTCCTTAAATGCTACT 58.048 36.000 0.00 0.00 0.00 2.57
2510 8865 7.044798 ACAAGATGTCTCCTTAAATGCTACTC 58.955 38.462 0.00 0.00 0.00 2.59
2511 8866 6.168270 AGATGTCTCCTTAAATGCTACTCC 57.832 41.667 0.00 0.00 0.00 3.85
2512 8867 4.755266 TGTCTCCTTAAATGCTACTCCC 57.245 45.455 0.00 0.00 0.00 4.30
2513 8868 4.362677 TGTCTCCTTAAATGCTACTCCCT 58.637 43.478 0.00 0.00 0.00 4.20
2514 8869 4.406003 TGTCTCCTTAAATGCTACTCCCTC 59.594 45.833 0.00 0.00 0.00 4.30
2515 8870 4.651962 GTCTCCTTAAATGCTACTCCCTCT 59.348 45.833 0.00 0.00 0.00 3.69
2516 8871 4.651503 TCTCCTTAAATGCTACTCCCTCTG 59.348 45.833 0.00 0.00 0.00 3.35
2517 8872 4.362677 TCCTTAAATGCTACTCCCTCTGT 58.637 43.478 0.00 0.00 0.00 3.41
2518 8873 5.525484 TCCTTAAATGCTACTCCCTCTGTA 58.475 41.667 0.00 0.00 0.00 2.74
2519 8874 5.962031 TCCTTAAATGCTACTCCCTCTGTAA 59.038 40.000 0.00 0.00 0.00 2.41
2520 8875 6.442564 TCCTTAAATGCTACTCCCTCTGTAAA 59.557 38.462 0.00 0.00 0.00 2.01
2521 8876 7.127339 TCCTTAAATGCTACTCCCTCTGTAAAT 59.873 37.037 0.00 0.00 0.00 1.40
2522 8877 7.775561 CCTTAAATGCTACTCCCTCTGTAAATT 59.224 37.037 0.00 0.00 0.00 1.82
2523 8878 9.178758 CTTAAATGCTACTCCCTCTGTAAATTT 57.821 33.333 0.00 0.00 0.00 1.82
2524 8879 9.528489 TTAAATGCTACTCCCTCTGTAAATTTT 57.472 29.630 0.00 0.00 0.00 1.82
2525 8880 8.422577 AAATGCTACTCCCTCTGTAAATTTTT 57.577 30.769 0.00 0.00 0.00 1.94
2526 8881 9.528489 AAATGCTACTCCCTCTGTAAATTTTTA 57.472 29.630 0.00 0.00 0.00 1.52
2527 8882 9.700831 AATGCTACTCCCTCTGTAAATTTTTAT 57.299 29.630 0.00 0.00 0.00 1.40
2583 8938 9.968743 GTAACTAATTTTGCCTATCATATACGC 57.031 33.333 0.00 0.00 0.00 4.42
2584 8939 8.848474 AACTAATTTTGCCTATCATATACGCT 57.152 30.769 0.00 0.00 0.00 5.07
2585 8940 8.848474 ACTAATTTTGCCTATCATATACGCTT 57.152 30.769 0.00 0.00 0.00 4.68
2671 9026 6.976934 TCATACATGATCAACTAGGCACTA 57.023 37.500 0.00 0.00 41.75 2.74
2672 9027 6.749139 TCATACATGATCAACTAGGCACTAC 58.251 40.000 0.00 0.00 41.75 2.73
2711 9074 5.300034 TCACTGCAAGAGTTTTGTCATTCAT 59.700 36.000 0.00 0.00 37.43 2.57
2730 9093 9.045223 TCATTCATATATACAGTTGTGTCTTGC 57.955 33.333 0.00 0.00 38.19 4.01
2739 9102 2.226437 AGTTGTGTCTTGCCTAATTGCG 59.774 45.455 0.00 0.00 0.00 4.85
2787 9150 5.856126 TGTAAATACACTGCTGTTGCTAC 57.144 39.130 0.00 0.00 40.48 3.58
2800 9163 4.878397 GCTGTTGCTACTTCTCATGGTTAT 59.122 41.667 0.00 0.00 36.03 1.89
2994 9370 2.971330 ACATCTAGGCATCTAGCTGCTT 59.029 45.455 17.47 12.99 41.14 3.91
3064 9443 6.993786 AGGCATTAGTAAGAAGAAGAAAGC 57.006 37.500 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.036765 CCCATCCGACGGTTCAAGAA 60.037 55.000 14.79 0.00 0.00 2.52
2 3 0.901114 TCCCATCCGACGGTTCAAGA 60.901 55.000 14.79 3.15 0.00 3.02
4 5 0.397187 TTTCCCATCCGACGGTTCAA 59.603 50.000 14.79 0.00 0.00 2.69
5 6 0.616371 ATTTCCCATCCGACGGTTCA 59.384 50.000 14.79 0.00 0.00 3.18
6 7 1.296727 GATTTCCCATCCGACGGTTC 58.703 55.000 14.79 0.00 0.00 3.62
10 11 1.603802 CCATTGATTTCCCATCCGACG 59.396 52.381 0.00 0.00 0.00 5.12
13 14 0.675633 GGCCATTGATTTCCCATCCG 59.324 55.000 0.00 0.00 0.00 4.18
14 15 1.051008 GGGCCATTGATTTCCCATCC 58.949 55.000 4.39 0.00 38.62 3.51
15 16 1.690352 CTGGGCCATTGATTTCCCATC 59.310 52.381 6.72 0.00 46.71 3.51
17 18 0.709397 TCTGGGCCATTGATTTCCCA 59.291 50.000 6.72 0.00 45.87 4.37
18 19 1.342374 ACTCTGGGCCATTGATTTCCC 60.342 52.381 6.72 0.00 39.22 3.97
19 20 2.027385 GACTCTGGGCCATTGATTTCC 58.973 52.381 6.72 0.00 0.00 3.13
20 21 3.010200 AGACTCTGGGCCATTGATTTC 57.990 47.619 6.72 1.64 0.00 2.17
21 22 3.463048 AAGACTCTGGGCCATTGATTT 57.537 42.857 6.72 0.00 0.00 2.17
23 24 3.463048 AAAAGACTCTGGGCCATTGAT 57.537 42.857 6.72 0.00 0.00 2.57
24 25 2.978156 AAAAGACTCTGGGCCATTGA 57.022 45.000 6.72 0.00 0.00 2.57
42 43 5.488919 AGGAGATATGTCCAGAGGTTGAAAA 59.511 40.000 20.34 0.00 39.34 2.29
43 44 5.032846 AGGAGATATGTCCAGAGGTTGAAA 58.967 41.667 20.34 0.00 39.34 2.69
45 46 4.271807 AGGAGATATGTCCAGAGGTTGA 57.728 45.455 20.34 0.00 39.34 3.18
46 47 4.202305 GGAAGGAGATATGTCCAGAGGTTG 60.202 50.000 20.34 0.00 39.34 3.77
47 48 3.970640 GGAAGGAGATATGTCCAGAGGTT 59.029 47.826 20.34 5.91 39.34 3.50
49 50 3.855668 AGGAAGGAGATATGTCCAGAGG 58.144 50.000 20.34 0.00 39.34 3.69
50 51 4.898265 TCAAGGAAGGAGATATGTCCAGAG 59.102 45.833 20.34 4.91 39.34 3.35
51 52 4.883759 TCAAGGAAGGAGATATGTCCAGA 58.116 43.478 20.34 6.02 39.34 3.86
52 53 4.502950 GCTCAAGGAAGGAGATATGTCCAG 60.503 50.000 20.34 8.44 39.34 3.86
53 54 3.389329 GCTCAAGGAAGGAGATATGTCCA 59.611 47.826 20.34 0.00 39.34 4.02
54 55 3.244387 GGCTCAAGGAAGGAGATATGTCC 60.244 52.174 10.98 10.98 34.24 4.02
56 57 2.366916 CGGCTCAAGGAAGGAGATATGT 59.633 50.000 0.00 0.00 34.24 2.29
57 58 2.869636 GCGGCTCAAGGAAGGAGATATG 60.870 54.545 0.00 0.00 34.24 1.78
58 59 1.346068 GCGGCTCAAGGAAGGAGATAT 59.654 52.381 0.00 0.00 34.24 1.63
59 60 0.753262 GCGGCTCAAGGAAGGAGATA 59.247 55.000 0.00 0.00 34.24 1.98
61 62 2.660064 GGCGGCTCAAGGAAGGAGA 61.660 63.158 0.00 0.00 34.24 3.71
62 63 2.124942 GGCGGCTCAAGGAAGGAG 60.125 66.667 0.00 0.00 35.47 3.69
63 64 2.927856 TGGCGGCTCAAGGAAGGA 60.928 61.111 11.43 0.00 0.00 3.36
64 65 2.437359 CTGGCGGCTCAAGGAAGG 60.437 66.667 11.43 0.00 0.00 3.46
65 66 1.743252 GACTGGCGGCTCAAGGAAG 60.743 63.158 11.43 0.00 0.00 3.46
66 67 1.841302 ATGACTGGCGGCTCAAGGAA 61.841 55.000 11.43 0.00 0.00 3.36
67 68 2.244117 GATGACTGGCGGCTCAAGGA 62.244 60.000 11.43 0.00 0.00 3.36
68 69 1.817099 GATGACTGGCGGCTCAAGG 60.817 63.158 11.43 0.00 0.00 3.61
69 70 1.078918 TGATGACTGGCGGCTCAAG 60.079 57.895 11.43 1.20 0.00 3.02
71 72 2.265739 GTGATGACTGGCGGCTCA 59.734 61.111 11.43 6.99 0.00 4.26
72 73 1.812922 CAGTGATGACTGGCGGCTC 60.813 63.158 11.43 0.00 45.26 4.70
73 74 2.267006 CAGTGATGACTGGCGGCT 59.733 61.111 11.43 0.00 45.26 5.52
81 82 1.090052 GCGGTTAGGCCAGTGATGAC 61.090 60.000 5.01 0.00 36.97 3.06
82 83 1.220749 GCGGTTAGGCCAGTGATGA 59.779 57.895 5.01 0.00 36.97 2.92
151 152 4.452733 GTGGTTCCGAGGAGGGCG 62.453 72.222 0.00 0.00 41.52 6.13
152 153 4.097361 GGTGGTTCCGAGGAGGGC 62.097 72.222 0.00 0.00 41.52 5.19
153 154 2.284699 AGGTGGTTCCGAGGAGGG 60.285 66.667 0.00 0.00 41.99 4.30
154 155 2.359967 GGAGGTGGTTCCGAGGAGG 61.360 68.421 0.00 0.00 41.99 4.30
155 156 2.359967 GGGAGGTGGTTCCGAGGAG 61.360 68.421 0.00 0.00 41.99 3.69
156 157 2.284405 GGGAGGTGGTTCCGAGGA 60.284 66.667 0.00 0.00 41.99 3.71
157 158 2.606519 TGGGAGGTGGTTCCGAGG 60.607 66.667 0.00 0.00 41.99 4.63
158 159 2.663196 GTGGGAGGTGGTTCCGAG 59.337 66.667 0.00 0.00 41.99 4.63
159 160 2.926242 GGTGGGAGGTGGTTCCGA 60.926 66.667 0.00 0.00 41.99 4.55
160 161 4.388499 CGGTGGGAGGTGGTTCCG 62.388 72.222 0.00 0.00 41.99 4.30
161 162 4.717313 GCGGTGGGAGGTGGTTCC 62.717 72.222 0.00 0.00 36.46 3.62
192 193 1.845205 CCTAGAGGGATGGCCAGGG 60.845 68.421 13.05 0.00 37.23 4.45
203 204 4.860881 TGCGAGGGGCCCTAGAGG 62.861 72.222 33.89 20.19 42.61 3.69
204 205 3.541713 GTGCGAGGGGCCCTAGAG 61.542 72.222 33.89 24.14 42.61 2.43
205 206 4.075793 AGTGCGAGGGGCCCTAGA 62.076 66.667 33.89 17.16 42.61 2.43
206 207 3.854669 CAGTGCGAGGGGCCCTAG 61.855 72.222 28.92 27.71 42.61 3.02
219 220 1.398960 CGCCGAAGAAAAAGCTCAGTG 60.399 52.381 0.00 0.00 0.00 3.66
220 221 0.868406 CGCCGAAGAAAAAGCTCAGT 59.132 50.000 0.00 0.00 0.00 3.41
221 222 1.148310 TCGCCGAAGAAAAAGCTCAG 58.852 50.000 0.00 0.00 0.00 3.35
222 223 1.263217 GTTCGCCGAAGAAAAAGCTCA 59.737 47.619 0.00 0.00 0.00 4.26
223 224 1.399855 GGTTCGCCGAAGAAAAAGCTC 60.400 52.381 0.00 0.00 0.00 4.09
224 225 0.591659 GGTTCGCCGAAGAAAAAGCT 59.408 50.000 0.00 0.00 0.00 3.74
225 226 0.386858 GGGTTCGCCGAAGAAAAAGC 60.387 55.000 0.00 0.00 38.45 3.51
226 227 0.240145 GGGGTTCGCCGAAGAAAAAG 59.760 55.000 0.00 0.00 38.45 2.27
227 228 1.174078 GGGGGTTCGCCGAAGAAAAA 61.174 55.000 0.00 0.00 38.45 1.94
228 229 1.601477 GGGGGTTCGCCGAAGAAAA 60.601 57.895 0.00 0.00 38.45 2.29
231 232 4.011517 GTGGGGGTTCGCCGAAGA 62.012 66.667 0.00 0.00 39.47 2.87
233 234 4.629523 GTGTGGGGGTTCGCCGAA 62.630 66.667 0.00 0.00 39.47 4.30
274 275 2.598787 TTTAGGGTGAGGGCGGTGG 61.599 63.158 0.00 0.00 0.00 4.61
275 276 1.376812 GTTTAGGGTGAGGGCGGTG 60.377 63.158 0.00 0.00 0.00 4.94
276 277 2.599757 GGTTTAGGGTGAGGGCGGT 61.600 63.158 0.00 0.00 0.00 5.68
279 280 1.212195 CTTAGGGTTTAGGGTGAGGGC 59.788 57.143 0.00 0.00 0.00 5.19
280 281 2.841795 TCTTAGGGTTTAGGGTGAGGG 58.158 52.381 0.00 0.00 0.00 4.30
281 282 5.304871 GTCTATCTTAGGGTTTAGGGTGAGG 59.695 48.000 0.00 0.00 0.00 3.86
282 283 5.897824 TGTCTATCTTAGGGTTTAGGGTGAG 59.102 44.000 0.00 0.00 0.00 3.51
284 285 5.661759 AGTGTCTATCTTAGGGTTTAGGGTG 59.338 44.000 0.00 0.00 0.00 4.61
285 286 5.661759 CAGTGTCTATCTTAGGGTTTAGGGT 59.338 44.000 0.00 0.00 0.00 4.34
286 287 5.070580 CCAGTGTCTATCTTAGGGTTTAGGG 59.929 48.000 0.00 0.00 0.00 3.53
287 288 5.070580 CCCAGTGTCTATCTTAGGGTTTAGG 59.929 48.000 0.00 0.00 0.00 2.69
288 289 5.070580 CCCCAGTGTCTATCTTAGGGTTTAG 59.929 48.000 0.00 0.00 32.90 1.85
289 290 4.966805 CCCCAGTGTCTATCTTAGGGTTTA 59.033 45.833 0.00 0.00 32.90 2.01
292 293 2.318207 ACCCCAGTGTCTATCTTAGGGT 59.682 50.000 0.00 0.00 41.76 4.34
293 294 2.700897 CACCCCAGTGTCTATCTTAGGG 59.299 54.545 0.00 0.00 39.30 3.53
294 295 3.643237 TCACCCCAGTGTCTATCTTAGG 58.357 50.000 0.00 0.00 44.83 2.69
295 296 4.895889 TCATCACCCCAGTGTCTATCTTAG 59.104 45.833 0.00 0.00 44.83 2.18
296 297 4.649674 GTCATCACCCCAGTGTCTATCTTA 59.350 45.833 0.00 0.00 44.83 2.10
297 298 3.452627 GTCATCACCCCAGTGTCTATCTT 59.547 47.826 0.00 0.00 44.83 2.40
299 300 2.223829 CGTCATCACCCCAGTGTCTATC 60.224 54.545 0.00 0.00 44.83 2.08
301 302 1.182667 CGTCATCACCCCAGTGTCTA 58.817 55.000 0.00 0.00 44.83 2.59
302 303 1.544825 CCGTCATCACCCCAGTGTCT 61.545 60.000 0.00 0.00 44.83 3.41
303 304 1.079127 CCGTCATCACCCCAGTGTC 60.079 63.158 0.00 0.00 44.83 3.67
305 306 2.436646 GCCGTCATCACCCCAGTG 60.437 66.667 0.00 0.00 46.00 3.66
306 307 4.082523 CGCCGTCATCACCCCAGT 62.083 66.667 0.00 0.00 0.00 4.00
307 308 4.838152 CCGCCGTCATCACCCCAG 62.838 72.222 0.00 0.00 0.00 4.45
320 321 4.491409 GAGAAGGAAGGGGCCGCC 62.491 72.222 17.56 9.34 0.00 6.13
321 322 4.491409 GGAGAAGGAAGGGGCCGC 62.491 72.222 12.88 12.88 0.00 6.53
322 323 3.798511 GGGAGAAGGAAGGGGCCG 61.799 72.222 0.00 0.00 0.00 6.13
324 325 3.002371 CTGGGAGAAGGAAGGGGC 58.998 66.667 0.00 0.00 0.00 5.80
325 326 3.002371 GCTGGGAGAAGGAAGGGG 58.998 66.667 0.00 0.00 0.00 4.79
326 327 1.965754 CTCGCTGGGAGAAGGAAGGG 61.966 65.000 15.95 0.00 46.23 3.95
327 328 1.261238 ACTCGCTGGGAGAAGGAAGG 61.261 60.000 26.04 0.61 46.23 3.46
328 329 0.174617 GACTCGCTGGGAGAAGGAAG 59.825 60.000 26.04 1.32 46.23 3.46
332 333 2.726351 GGGGACTCGCTGGGAGAAG 61.726 68.421 26.04 3.47 46.23 2.85
334 335 4.779733 GGGGGACTCGCTGGGAGA 62.780 72.222 26.04 0.00 46.23 3.71
348 349 1.210885 AAGCAGGAAGGAGAAGGGGG 61.211 60.000 0.00 0.00 0.00 5.40
349 350 0.254462 GAAGCAGGAAGGAGAAGGGG 59.746 60.000 0.00 0.00 0.00 4.79
350 351 1.284313 AGAAGCAGGAAGGAGAAGGG 58.716 55.000 0.00 0.00 0.00 3.95
351 352 2.355615 GGAAGAAGCAGGAAGGAGAAGG 60.356 54.545 0.00 0.00 0.00 3.46
354 355 2.334006 AGGAAGAAGCAGGAAGGAGA 57.666 50.000 0.00 0.00 0.00 3.71
355 356 2.304180 TGAAGGAAGAAGCAGGAAGGAG 59.696 50.000 0.00 0.00 0.00 3.69
357 358 2.867109 TGAAGGAAGAAGCAGGAAGG 57.133 50.000 0.00 0.00 0.00 3.46
358 359 4.330250 TGAATGAAGGAAGAAGCAGGAAG 58.670 43.478 0.00 0.00 0.00 3.46
360 361 4.371624 TTGAATGAAGGAAGAAGCAGGA 57.628 40.909 0.00 0.00 0.00 3.86
361 362 5.458041 TTTTGAATGAAGGAAGAAGCAGG 57.542 39.130 0.00 0.00 0.00 4.85
362 363 6.307318 CGATTTTTGAATGAAGGAAGAAGCAG 59.693 38.462 0.00 0.00 0.00 4.24
364 365 6.381801 TCGATTTTTGAATGAAGGAAGAAGC 58.618 36.000 0.00 0.00 0.00 3.86
365 366 8.857216 CAATCGATTTTTGAATGAAGGAAGAAG 58.143 33.333 8.21 0.00 0.00 2.85
367 368 8.023128 GTCAATCGATTTTTGAATGAAGGAAGA 58.977 33.333 8.21 0.00 35.03 2.87
369 370 6.801377 CGTCAATCGATTTTTGAATGAAGGAA 59.199 34.615 8.21 0.00 42.86 3.36
370 371 6.314018 CGTCAATCGATTTTTGAATGAAGGA 58.686 36.000 8.21 0.00 42.86 3.36
371 372 5.003778 GCGTCAATCGATTTTTGAATGAAGG 59.996 40.000 8.21 0.00 42.86 3.46
372 373 5.796935 AGCGTCAATCGATTTTTGAATGAAG 59.203 36.000 8.21 5.32 42.86 3.02
373 374 5.568677 CAGCGTCAATCGATTTTTGAATGAA 59.431 36.000 8.21 0.00 42.86 2.57
374 375 5.088068 CAGCGTCAATCGATTTTTGAATGA 58.912 37.500 8.21 0.00 42.86 2.57
375 376 5.088068 TCAGCGTCAATCGATTTTTGAATG 58.912 37.500 8.21 5.22 42.86 2.67
376 377 5.295431 TCAGCGTCAATCGATTTTTGAAT 57.705 34.783 8.21 0.00 42.86 2.57
377 378 4.740741 TCAGCGTCAATCGATTTTTGAA 57.259 36.364 8.21 0.00 42.86 2.69
379 380 5.274959 CGAATTCAGCGTCAATCGATTTTTG 60.275 40.000 8.21 0.00 42.86 2.44
380 381 4.788100 CGAATTCAGCGTCAATCGATTTTT 59.212 37.500 8.21 0.00 42.86 1.94
382 383 3.616821 TCGAATTCAGCGTCAATCGATTT 59.383 39.130 8.21 0.00 42.86 2.17
383 384 3.186909 TCGAATTCAGCGTCAATCGATT 58.813 40.909 4.39 4.39 42.86 3.34
384 385 2.809446 TCGAATTCAGCGTCAATCGAT 58.191 42.857 6.22 0.00 42.86 3.59
385 386 2.271821 TCGAATTCAGCGTCAATCGA 57.728 45.000 6.22 0.00 42.86 3.59
386 387 3.000222 TGATTCGAATTCAGCGTCAATCG 60.000 43.478 12.81 0.00 43.12 3.34
387 388 4.512657 CTGATTCGAATTCAGCGTCAATC 58.487 43.478 12.81 0.00 0.00 2.67
388 389 3.242543 GCTGATTCGAATTCAGCGTCAAT 60.243 43.478 29.48 3.62 45.63 2.57
391 392 2.359523 GCTGATTCGAATTCAGCGTC 57.640 50.000 29.48 13.66 45.63 5.19
396 397 2.011947 CAGCCAGCTGATTCGAATTCA 58.988 47.619 17.39 10.52 46.30 2.57
407 408 0.107800 AGCTACACATCAGCCAGCTG 60.108 55.000 13.54 13.54 40.92 4.24
408 409 1.489481 TAGCTACACATCAGCCAGCT 58.511 50.000 0.00 0.00 44.43 4.24
409 410 2.315925 TTAGCTACACATCAGCCAGC 57.684 50.000 0.00 0.00 39.99 4.85
410 411 3.620374 CAGTTTAGCTACACATCAGCCAG 59.380 47.826 12.39 0.00 39.99 4.85
411 412 3.260632 TCAGTTTAGCTACACATCAGCCA 59.739 43.478 12.39 0.00 39.99 4.75
412 413 3.861840 TCAGTTTAGCTACACATCAGCC 58.138 45.455 12.39 0.00 39.99 4.85
414 415 6.166279 TCCTTTCAGTTTAGCTACACATCAG 58.834 40.000 12.39 2.99 0.00 2.90
417 418 9.167311 CTTATTCCTTTCAGTTTAGCTACACAT 57.833 33.333 12.39 0.00 0.00 3.21
419 420 7.606839 ACCTTATTCCTTTCAGTTTAGCTACAC 59.393 37.037 1.58 1.58 0.00 2.90
420 421 7.686434 ACCTTATTCCTTTCAGTTTAGCTACA 58.314 34.615 0.00 0.00 0.00 2.74
421 422 7.010275 CGACCTTATTCCTTTCAGTTTAGCTAC 59.990 40.741 0.00 0.00 0.00 3.58
422 423 7.039882 CGACCTTATTCCTTTCAGTTTAGCTA 58.960 38.462 0.00 0.00 0.00 3.32
423 424 5.875359 CGACCTTATTCCTTTCAGTTTAGCT 59.125 40.000 0.00 0.00 0.00 3.32
427 428 3.435671 CGCGACCTTATTCCTTTCAGTTT 59.564 43.478 0.00 0.00 0.00 2.66
428 429 3.000727 CGCGACCTTATTCCTTTCAGTT 58.999 45.455 0.00 0.00 0.00 3.16
430 431 2.603560 GTCGCGACCTTATTCCTTTCAG 59.396 50.000 28.61 0.00 0.00 3.02
432 433 2.889852 AGTCGCGACCTTATTCCTTTC 58.110 47.619 34.08 6.00 0.00 2.62
433 434 3.259902 GAAGTCGCGACCTTATTCCTTT 58.740 45.455 34.08 18.90 0.00 3.11
434 435 2.734492 CGAAGTCGCGACCTTATTCCTT 60.734 50.000 34.08 19.63 0.00 3.36
435 436 1.202268 CGAAGTCGCGACCTTATTCCT 60.202 52.381 34.08 11.69 0.00 3.36
436 437 1.197910 CGAAGTCGCGACCTTATTCC 58.802 55.000 34.08 14.66 0.00 3.01
464 2777 4.070552 GAGCCCCAGCGAACGAGT 62.071 66.667 0.00 0.00 46.67 4.18
465 2778 4.069232 TGAGCCCCAGCGAACGAG 62.069 66.667 0.00 0.00 46.67 4.18
466 2779 4.373116 GTGAGCCCCAGCGAACGA 62.373 66.667 0.00 0.00 46.67 3.85
474 2787 3.075005 GCTACGGAGTGAGCCCCA 61.075 66.667 0.00 0.00 45.73 4.96
488 2801 4.814234 TCAGCTTTTCTTTCTCGTTTGCTA 59.186 37.500 0.00 0.00 0.00 3.49
507 2820 2.871022 CAGATGAACTAGCCATGTCAGC 59.129 50.000 3.26 0.00 0.00 4.26
536 2849 3.242316 GCCGTTAGATTGGATTCACGAAC 60.242 47.826 0.00 0.00 0.00 3.95
567 2881 5.072872 TGGATTTTTCATGTTCCCCACAAAT 59.927 36.000 0.00 0.00 39.50 2.32
570 2884 3.581101 TGGATTTTTCATGTTCCCCACA 58.419 40.909 0.00 0.00 40.71 4.17
573 2887 4.615588 TGTTGGATTTTTCATGTTCCCC 57.384 40.909 0.00 0.00 0.00 4.81
580 2894 5.310331 ACCTGGGAAATGTTGGATTTTTCAT 59.690 36.000 0.00 0.00 32.30 2.57
591 2905 7.948034 TTCGAATATTTACCTGGGAAATGTT 57.052 32.000 24.18 23.04 32.35 2.71
609 2923 5.240623 TGCTTCCATACAGTTTGTTTCGAAT 59.759 36.000 0.00 0.00 0.00 3.34
624 2938 3.029483 TGCATGGGATTTGCTTCCATA 57.971 42.857 0.00 0.00 39.07 2.74
638 2957 3.132160 TGCTTTGTGTTTTCATGCATGG 58.868 40.909 25.97 8.24 0.00 3.66
682 3001 4.233005 GACCCTGTAAAAGACTGTACGTC 58.767 47.826 0.00 9.05 43.17 4.34
683 3002 3.006217 GGACCCTGTAAAAGACTGTACGT 59.994 47.826 0.00 0.00 0.00 3.57
684 3003 3.257624 AGGACCCTGTAAAAGACTGTACG 59.742 47.826 0.00 0.00 0.00 3.67
685 3004 4.886496 AGGACCCTGTAAAAGACTGTAC 57.114 45.455 0.00 0.00 0.00 2.90
686 3005 5.367352 TGAAAGGACCCTGTAAAAGACTGTA 59.633 40.000 0.00 0.00 0.00 2.74
687 3006 4.165372 TGAAAGGACCCTGTAAAAGACTGT 59.835 41.667 0.00 0.00 0.00 3.55
688 3007 4.714632 TGAAAGGACCCTGTAAAAGACTG 58.285 43.478 0.00 0.00 0.00 3.51
689 3008 5.382664 TTGAAAGGACCCTGTAAAAGACT 57.617 39.130 0.00 0.00 0.00 3.24
690 3009 5.593095 AGTTTGAAAGGACCCTGTAAAAGAC 59.407 40.000 0.00 0.00 0.00 3.01
691 3010 5.762279 AGTTTGAAAGGACCCTGTAAAAGA 58.238 37.500 0.00 0.00 0.00 2.52
692 3011 6.465439 AAGTTTGAAAGGACCCTGTAAAAG 57.535 37.500 0.00 0.00 0.00 2.27
693 3012 6.127281 GGAAAGTTTGAAAGGACCCTGTAAAA 60.127 38.462 0.00 0.00 0.00 1.52
694 3013 5.361571 GGAAAGTTTGAAAGGACCCTGTAAA 59.638 40.000 0.00 0.00 0.00 2.01
695 3014 4.891168 GGAAAGTTTGAAAGGACCCTGTAA 59.109 41.667 0.00 0.00 0.00 2.41
696 3015 4.079672 TGGAAAGTTTGAAAGGACCCTGTA 60.080 41.667 0.00 0.00 0.00 2.74
697 3016 3.296854 GGAAAGTTTGAAAGGACCCTGT 58.703 45.455 0.00 0.00 0.00 4.00
698 3017 3.295973 TGGAAAGTTTGAAAGGACCCTG 58.704 45.455 0.00 0.00 0.00 4.45
699 3018 3.680777 TGGAAAGTTTGAAAGGACCCT 57.319 42.857 0.00 0.00 0.00 4.34
700 3019 4.746535 TTTGGAAAGTTTGAAAGGACCC 57.253 40.909 0.00 0.00 0.00 4.46
701 3020 6.811954 TGTATTTGGAAAGTTTGAAAGGACC 58.188 36.000 0.00 0.00 0.00 4.46
702 3021 7.598869 GGATGTATTTGGAAAGTTTGAAAGGAC 59.401 37.037 0.00 0.00 0.00 3.85
703 3022 7.256154 GGGATGTATTTGGAAAGTTTGAAAGGA 60.256 37.037 0.00 0.00 0.00 3.36
704 3023 6.873605 GGGATGTATTTGGAAAGTTTGAAAGG 59.126 38.462 0.00 0.00 0.00 3.11
705 3024 6.873605 GGGGATGTATTTGGAAAGTTTGAAAG 59.126 38.462 0.00 0.00 0.00 2.62
706 3025 6.556874 AGGGGATGTATTTGGAAAGTTTGAAA 59.443 34.615 0.00 0.00 0.00 2.69
707 3026 6.014669 CAGGGGATGTATTTGGAAAGTTTGAA 60.015 38.462 0.00 0.00 0.00 2.69
708 3027 5.480073 CAGGGGATGTATTTGGAAAGTTTGA 59.520 40.000 0.00 0.00 0.00 2.69
709 3028 5.480073 TCAGGGGATGTATTTGGAAAGTTTG 59.520 40.000 0.00 0.00 0.00 2.93
710 3029 5.650283 TCAGGGGATGTATTTGGAAAGTTT 58.350 37.500 0.00 0.00 0.00 2.66
711 3030 5.269554 TCAGGGGATGTATTTGGAAAGTT 57.730 39.130 0.00 0.00 0.00 2.66
712 3031 4.946160 TCAGGGGATGTATTTGGAAAGT 57.054 40.909 0.00 0.00 0.00 2.66
713 3032 6.380846 TCAAATCAGGGGATGTATTTGGAAAG 59.619 38.462 0.00 0.00 37.21 2.62
714 3033 6.259893 TCAAATCAGGGGATGTATTTGGAAA 58.740 36.000 0.00 0.00 37.21 3.13
715 3034 5.836705 TCAAATCAGGGGATGTATTTGGAA 58.163 37.500 0.00 0.00 37.21 3.53
716 3035 5.464588 TCAAATCAGGGGATGTATTTGGA 57.535 39.130 0.00 0.00 37.21 3.53
717 3036 6.463331 CCATTCAAATCAGGGGATGTATTTGG 60.463 42.308 0.00 0.00 37.21 3.28
718 3037 6.324512 TCCATTCAAATCAGGGGATGTATTTG 59.675 38.462 0.00 0.00 37.54 2.32
719 3038 6.442961 TCCATTCAAATCAGGGGATGTATTT 58.557 36.000 0.00 0.00 32.92 1.40
720 3039 6.029492 TCCATTCAAATCAGGGGATGTATT 57.971 37.500 0.00 0.00 32.92 1.89
721 3040 5.668135 TCCATTCAAATCAGGGGATGTAT 57.332 39.130 0.00 0.00 32.92 2.29
722 3041 5.044179 ACTTCCATTCAAATCAGGGGATGTA 60.044 40.000 0.00 0.00 32.89 2.29
723 3042 4.264532 ACTTCCATTCAAATCAGGGGATGT 60.265 41.667 0.00 0.00 32.92 3.06
724 3043 4.098960 CACTTCCATTCAAATCAGGGGATG 59.901 45.833 0.00 0.00 32.92 3.51
725 3044 4.284178 CACTTCCATTCAAATCAGGGGAT 58.716 43.478 0.00 0.00 34.43 3.85
726 3045 3.564133 CCACTTCCATTCAAATCAGGGGA 60.564 47.826 0.00 0.00 0.00 4.81
727 3046 2.762327 CCACTTCCATTCAAATCAGGGG 59.238 50.000 0.00 0.00 0.00 4.79
728 3047 2.762327 CCCACTTCCATTCAAATCAGGG 59.238 50.000 0.00 0.00 0.00 4.45
729 3048 2.167075 GCCCACTTCCATTCAAATCAGG 59.833 50.000 0.00 0.00 0.00 3.86
730 3049 2.167075 GGCCCACTTCCATTCAAATCAG 59.833 50.000 0.00 0.00 0.00 2.90
731 3050 2.178580 GGCCCACTTCCATTCAAATCA 58.821 47.619 0.00 0.00 0.00 2.57
732 3051 1.482182 GGGCCCACTTCCATTCAAATC 59.518 52.381 19.95 0.00 0.00 2.17
733 3052 1.571955 GGGCCCACTTCCATTCAAAT 58.428 50.000 19.95 0.00 0.00 2.32
734 3053 0.897863 CGGGCCCACTTCCATTCAAA 60.898 55.000 24.92 0.00 0.00 2.69
735 3054 1.304052 CGGGCCCACTTCCATTCAA 60.304 57.895 24.92 0.00 0.00 2.69
736 3055 2.354729 CGGGCCCACTTCCATTCA 59.645 61.111 24.92 0.00 0.00 2.57
737 3056 2.046285 CACGGGCCCACTTCCATTC 61.046 63.158 24.92 0.00 0.00 2.67
738 3057 2.035626 CACGGGCCCACTTCCATT 59.964 61.111 24.92 0.00 0.00 3.16
739 3058 4.740822 GCACGGGCCCACTTCCAT 62.741 66.667 24.92 0.00 0.00 3.41
749 3068 3.072211 GGTTATTAATAGAGGCACGGGC 58.928 50.000 0.00 0.00 40.13 6.13
750 3069 4.345859 TGGTTATTAATAGAGGCACGGG 57.654 45.455 0.00 0.00 0.00 5.28
751 3070 6.877611 AATTGGTTATTAATAGAGGCACGG 57.122 37.500 0.00 0.00 0.00 4.94
767 3086 9.744468 GAGTGTTGTGATAGTTTTTAATTGGTT 57.256 29.630 0.00 0.00 0.00 3.67
768 3087 9.131791 AGAGTGTTGTGATAGTTTTTAATTGGT 57.868 29.630 0.00 0.00 0.00 3.67
769 3088 9.398170 CAGAGTGTTGTGATAGTTTTTAATTGG 57.602 33.333 0.00 0.00 0.00 3.16
770 3089 9.950680 ACAGAGTGTTGTGATAGTTTTTAATTG 57.049 29.630 0.00 0.00 0.00 2.32
775 3094 8.784043 GGATTACAGAGTGTTGTGATAGTTTTT 58.216 33.333 0.00 0.00 28.65 1.94
776 3095 7.390718 GGGATTACAGAGTGTTGTGATAGTTTT 59.609 37.037 0.00 0.00 28.65 2.43
777 3096 6.879458 GGGATTACAGAGTGTTGTGATAGTTT 59.121 38.462 0.00 0.00 28.65 2.66
778 3097 6.407202 GGGATTACAGAGTGTTGTGATAGTT 58.593 40.000 0.00 0.00 28.65 2.24
779 3098 5.104900 GGGGATTACAGAGTGTTGTGATAGT 60.105 44.000 0.00 0.00 28.65 2.12
780 3099 5.129485 AGGGGATTACAGAGTGTTGTGATAG 59.871 44.000 0.00 0.00 28.65 2.08
781 3100 5.030147 AGGGGATTACAGAGTGTTGTGATA 58.970 41.667 0.00 0.00 28.65 2.15
782 3101 3.846588 AGGGGATTACAGAGTGTTGTGAT 59.153 43.478 0.00 0.00 30.86 3.06
783 3102 3.248024 AGGGGATTACAGAGTGTTGTGA 58.752 45.455 0.00 0.00 32.56 3.58
784 3103 3.007940 TGAGGGGATTACAGAGTGTTGTG 59.992 47.826 0.00 0.00 32.56 3.33
785 3104 3.248024 TGAGGGGATTACAGAGTGTTGT 58.752 45.455 0.00 0.00 35.09 3.32
786 3105 3.981071 TGAGGGGATTACAGAGTGTTG 57.019 47.619 0.00 0.00 0.00 3.33
787 3106 3.456277 GGATGAGGGGATTACAGAGTGTT 59.544 47.826 0.00 0.00 0.00 3.32
788 3107 3.041946 GGATGAGGGGATTACAGAGTGT 58.958 50.000 0.00 0.00 0.00 3.55
789 3108 2.370189 GGGATGAGGGGATTACAGAGTG 59.630 54.545 0.00 0.00 0.00 3.51
790 3109 2.251338 AGGGATGAGGGGATTACAGAGT 59.749 50.000 0.00 0.00 0.00 3.24
791 3110 2.636893 CAGGGATGAGGGGATTACAGAG 59.363 54.545 0.00 0.00 0.00 3.35
792 3111 2.022035 ACAGGGATGAGGGGATTACAGA 60.022 50.000 0.00 0.00 0.00 3.41
793 3112 2.412591 ACAGGGATGAGGGGATTACAG 58.587 52.381 0.00 0.00 0.00 2.74
794 3113 2.587060 ACAGGGATGAGGGGATTACA 57.413 50.000 0.00 0.00 0.00 2.41
795 3114 3.714798 TGTTACAGGGATGAGGGGATTAC 59.285 47.826 0.00 0.00 0.00 1.89
796 3115 4.015617 TGTTACAGGGATGAGGGGATTA 57.984 45.455 0.00 0.00 0.00 1.75
797 3116 2.858644 TGTTACAGGGATGAGGGGATT 58.141 47.619 0.00 0.00 0.00 3.01
798 3117 2.587060 TGTTACAGGGATGAGGGGAT 57.413 50.000 0.00 0.00 0.00 3.85
799 3118 2.408565 GATGTTACAGGGATGAGGGGA 58.591 52.381 0.00 0.00 0.00 4.81
800 3119 1.421646 GGATGTTACAGGGATGAGGGG 59.578 57.143 0.00 0.00 0.00 4.79
801 3120 2.105477 CAGGATGTTACAGGGATGAGGG 59.895 54.545 0.00 0.00 0.00 4.30
802 3121 3.482156 CAGGATGTTACAGGGATGAGG 57.518 52.381 0.00 0.00 0.00 3.86
813 3132 8.459621 AGCTTTGCTACACGTACAGGATGTTA 62.460 42.308 0.00 0.00 42.80 2.41
814 3133 7.756778 AGCTTTGCTACACGTACAGGATGTT 62.757 44.000 0.00 0.00 42.80 2.71
815 3134 6.362100 AGCTTTGCTACACGTACAGGATGT 62.362 45.833 0.00 0.00 46.30 3.06
816 3135 2.348666 GCTTTGCTACACGTACAGGATG 59.651 50.000 0.00 0.00 46.00 3.51
817 3136 2.233922 AGCTTTGCTACACGTACAGGAT 59.766 45.455 0.00 0.00 36.99 3.24
818 3137 1.616865 AGCTTTGCTACACGTACAGGA 59.383 47.619 0.00 0.00 36.99 3.86
819 3138 1.993370 GAGCTTTGCTACACGTACAGG 59.007 52.381 0.00 0.00 39.88 4.00
820 3139 1.649171 CGAGCTTTGCTACACGTACAG 59.351 52.381 0.00 0.00 39.88 2.74
821 3140 1.693467 CGAGCTTTGCTACACGTACA 58.307 50.000 0.00 0.00 39.88 2.90
822 3141 0.365859 GCGAGCTTTGCTACACGTAC 59.634 55.000 4.76 0.00 39.88 3.67
823 3142 1.068832 CGCGAGCTTTGCTACACGTA 61.069 55.000 0.00 0.00 39.88 3.57
824 3143 2.372690 CGCGAGCTTTGCTACACGT 61.373 57.895 0.00 0.00 39.88 4.49
825 3144 2.391821 CGCGAGCTTTGCTACACG 59.608 61.111 0.00 0.00 39.88 4.49
837 3156 3.156334 GCGTATATTGGGCGCGAG 58.844 61.111 12.10 0.00 41.70 5.03
841 3160 0.036388 ATCAGGGCGTATATTGGGCG 60.036 55.000 0.00 0.00 0.00 6.13
842 3161 2.200373 AATCAGGGCGTATATTGGGC 57.800 50.000 0.00 0.00 0.00 5.36
843 3162 6.055588 CCTATAAATCAGGGCGTATATTGGG 58.944 44.000 0.00 0.00 0.00 4.12
844 3163 6.884832 TCCTATAAATCAGGGCGTATATTGG 58.115 40.000 0.00 0.00 33.66 3.16
845 3164 7.556844 ACTCCTATAAATCAGGGCGTATATTG 58.443 38.462 0.00 0.00 33.66 1.90
846 3165 7.735326 ACTCCTATAAATCAGGGCGTATATT 57.265 36.000 0.00 0.00 33.66 1.28
878 3197 0.540365 TTGGAACGGAGGGAGTACGT 60.540 55.000 0.00 0.00 43.43 3.57
879 3198 0.604578 TTTGGAACGGAGGGAGTACG 59.395 55.000 0.00 0.00 0.00 3.67
880 3199 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
882 3201 4.376225 TTTATTTTGGAACGGAGGGAGT 57.624 40.909 0.00 0.00 0.00 3.85
883 3202 4.947388 TCATTTATTTTGGAACGGAGGGAG 59.053 41.667 0.00 0.00 0.00 4.30
885 3204 5.221244 GGATCATTTATTTTGGAACGGAGGG 60.221 44.000 0.00 0.00 0.00 4.30
886 3205 5.359576 TGGATCATTTATTTTGGAACGGAGG 59.640 40.000 0.00 0.00 0.00 4.30
887 3206 6.449635 TGGATCATTTATTTTGGAACGGAG 57.550 37.500 0.00 0.00 0.00 4.63
888 3207 6.435904 AGTTGGATCATTTATTTTGGAACGGA 59.564 34.615 0.00 0.00 0.00 4.69
921 3240 7.947890 TCCAAAATAAATGACCCAACTAGAGTT 59.052 33.333 0.00 0.00 39.12 3.01
923 3242 7.938140 TCCAAAATAAATGACCCAACTAGAG 57.062 36.000 0.00 0.00 0.00 2.43
924 3243 7.094549 CGTTCCAAAATAAATGACCCAACTAGA 60.095 37.037 0.00 0.00 0.00 2.43
925 3244 7.027161 CGTTCCAAAATAAATGACCCAACTAG 58.973 38.462 0.00 0.00 0.00 2.57
926 3245 6.071840 CCGTTCCAAAATAAATGACCCAACTA 60.072 38.462 0.00 0.00 0.00 2.24
928 3247 4.926832 CCGTTCCAAAATAAATGACCCAAC 59.073 41.667 0.00 0.00 0.00 3.77
930 3249 4.408276 TCCGTTCCAAAATAAATGACCCA 58.592 39.130 0.00 0.00 0.00 4.51
931 3250 4.142249 CCTCCGTTCCAAAATAAATGACCC 60.142 45.833 0.00 0.00 0.00 4.46
932 3251 4.142249 CCCTCCGTTCCAAAATAAATGACC 60.142 45.833 0.00 0.00 0.00 4.02
933 3252 4.703093 TCCCTCCGTTCCAAAATAAATGAC 59.297 41.667 0.00 0.00 0.00 3.06
935 3254 5.652994 TTCCCTCCGTTCCAAAATAAATG 57.347 39.130 0.00 0.00 0.00 2.32
936 3255 7.123383 ACTATTCCCTCCGTTCCAAAATAAAT 58.877 34.615 0.00 0.00 0.00 1.40
937 3256 6.486941 ACTATTCCCTCCGTTCCAAAATAAA 58.513 36.000 0.00 0.00 0.00 1.40
938 3257 6.069705 ACTATTCCCTCCGTTCCAAAATAA 57.930 37.500 0.00 0.00 0.00 1.40
939 3258 5.703730 ACTATTCCCTCCGTTCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
941 3260 5.502089 TTACTATTCCCTCCGTTCCAAAA 57.498 39.130 0.00 0.00 0.00 2.44
942 3261 5.221884 TGTTTACTATTCCCTCCGTTCCAAA 60.222 40.000 0.00 0.00 0.00 3.28
943 3262 4.286549 TGTTTACTATTCCCTCCGTTCCAA 59.713 41.667 0.00 0.00 0.00 3.53
944 3263 3.839490 TGTTTACTATTCCCTCCGTTCCA 59.161 43.478 0.00 0.00 0.00 3.53
946 3265 6.997239 ATTTGTTTACTATTCCCTCCGTTC 57.003 37.500 0.00 0.00 0.00 3.95
947 3266 6.943718 TCAATTTGTTTACTATTCCCTCCGTT 59.056 34.615 0.00 0.00 0.00 4.44
948 3267 6.478129 TCAATTTGTTTACTATTCCCTCCGT 58.522 36.000 0.00 0.00 0.00 4.69
949 3268 6.995511 TCAATTTGTTTACTATTCCCTCCG 57.004 37.500 0.00 0.00 0.00 4.63
952 3271 6.601613 TGCGATCAATTTGTTTACTATTCCCT 59.398 34.615 0.00 0.00 0.00 4.20
953 3272 6.791303 TGCGATCAATTTGTTTACTATTCCC 58.209 36.000 0.00 0.00 0.00 3.97
954 3273 8.856490 AATGCGATCAATTTGTTTACTATTCC 57.144 30.769 0.00 0.00 0.00 3.01
956 3275 9.086336 CCAAATGCGATCAATTTGTTTACTATT 57.914 29.630 20.91 0.00 34.48 1.73
957 3276 8.250332 ACCAAATGCGATCAATTTGTTTACTAT 58.750 29.630 20.91 4.25 34.48 2.12
1033 3382 2.357637 CGTTTGGGCTTTGAGTCTTTGA 59.642 45.455 0.00 0.00 0.00 2.69
1034 3383 2.731217 CGTTTGGGCTTTGAGTCTTTG 58.269 47.619 0.00 0.00 0.00 2.77
1035 3384 1.067060 GCGTTTGGGCTTTGAGTCTTT 59.933 47.619 0.00 0.00 0.00 2.52
1036 3385 0.668535 GCGTTTGGGCTTTGAGTCTT 59.331 50.000 0.00 0.00 0.00 3.01
1037 3386 1.507141 CGCGTTTGGGCTTTGAGTCT 61.507 55.000 0.00 0.00 0.00 3.24
1038 3387 1.082104 CGCGTTTGGGCTTTGAGTC 60.082 57.895 0.00 0.00 0.00 3.36
1039 3388 3.030652 CGCGTTTGGGCTTTGAGT 58.969 55.556 0.00 0.00 0.00 3.41
1155 3516 2.894240 TAATCCGCGGCGTCAAGGAC 62.894 60.000 23.51 0.00 35.36 3.85
1443 3823 2.915659 ACGAGCGTCAAGGGGTGA 60.916 61.111 0.00 0.00 0.00 4.02
1508 3895 1.440893 CGGAGAGAGCCCATGTCAG 59.559 63.158 0.00 0.00 0.00 3.51
1552 3939 4.411981 CTCCCTGCTGCTGCTGCT 62.412 66.667 27.67 0.00 40.48 4.24
1641 4031 3.814268 CAATGGTCCTTGCCGCCG 61.814 66.667 0.00 0.00 0.00 6.46
1643 4033 3.451894 CCCAATGGTCCTTGCCGC 61.452 66.667 0.00 0.00 0.00 6.53
1728 4118 2.197324 GGGTGGAAAGTGGTGGCA 59.803 61.111 0.00 0.00 0.00 4.92
1761 7609 2.592993 GGGAGGGTACAGCTGCACA 61.593 63.158 18.65 0.00 0.00 4.57
1926 8157 0.179059 TCGCAAAGGTCAGCAGTTGA 60.179 50.000 0.00 0.00 0.00 3.18
1933 8164 2.455032 CGAGTAGATCGCAAAGGTCAG 58.545 52.381 0.00 0.00 45.98 3.51
2088 8336 2.223618 GCGTGGAGAAGTAGATGGAGTC 60.224 54.545 0.00 0.00 0.00 3.36
2111 8359 2.678190 GCGCACTTGAAGAGGGTAGAAT 60.678 50.000 0.30 0.00 0.00 2.40
2282 8541 0.706433 ACATGAGCCCTTTGGTCCAT 59.294 50.000 0.00 0.00 40.88 3.41
2343 8602 1.573108 TTCGCCCTGATCTTCTTCCT 58.427 50.000 0.00 0.00 0.00 3.36
2348 8610 2.545731 GAGTCTTTCGCCCTGATCTTC 58.454 52.381 0.00 0.00 0.00 2.87
2360 8622 3.172919 GCAGCTGCGGAGTCTTTC 58.827 61.111 25.23 0.00 0.00 2.62
2546 8901 8.769359 AGGCAAAATTAGTTACTATACCTCTGT 58.231 33.333 0.00 0.00 0.00 3.41
2557 8912 9.968743 GCGTATATGATAGGCAAAATTAGTTAC 57.031 33.333 6.34 0.00 0.00 2.50
2558 8913 9.938280 AGCGTATATGATAGGCAAAATTAGTTA 57.062 29.630 12.25 0.00 0.00 2.24
2559 8914 8.848474 AGCGTATATGATAGGCAAAATTAGTT 57.152 30.769 12.25 0.00 0.00 2.24
2578 8933 7.817418 ATTAAAATGTGGGATGTAAGCGTAT 57.183 32.000 0.00 0.00 0.00 3.06
2580 8935 6.329496 CAATTAAAATGTGGGATGTAAGCGT 58.671 36.000 0.00 0.00 0.00 5.07
2582 8937 6.872920 TCCAATTAAAATGTGGGATGTAAGC 58.127 36.000 0.00 0.00 32.95 3.09
2583 8938 9.889128 AAATCCAATTAAAATGTGGGATGTAAG 57.111 29.630 0.00 0.00 35.43 2.34
2584 8939 9.664332 CAAATCCAATTAAAATGTGGGATGTAA 57.336 29.630 0.00 0.00 35.43 2.41
2585 8940 8.263640 CCAAATCCAATTAAAATGTGGGATGTA 58.736 33.333 0.00 0.00 35.43 2.29
2671 9026 4.828939 TGCAGTGAAGGAGATTTGATTTGT 59.171 37.500 0.00 0.00 0.00 2.83
2672 9027 5.381174 TGCAGTGAAGGAGATTTGATTTG 57.619 39.130 0.00 0.00 0.00 2.32
2711 9074 9.325198 CAATTAGGCAAGACACAACTGTATATA 57.675 33.333 0.00 0.00 0.00 0.86
2719 9082 2.584791 CGCAATTAGGCAAGACACAAC 58.415 47.619 0.00 0.00 0.00 3.32
2730 9093 1.218230 GCTCGAGGAGCGCAATTAGG 61.218 60.000 15.58 0.00 45.85 2.69
2787 9150 9.770097 ACATCTATGTACAATAACCATGAGAAG 57.230 33.333 0.00 0.00 39.68 2.85
2800 9163 9.031537 TCCTGAACTAAGAACATCTATGTACAA 57.968 33.333 0.00 0.00 40.80 2.41
2859 9222 4.354893 TTGCTGGCCTTTTGATGAATTT 57.645 36.364 3.32 0.00 0.00 1.82
2918 9281 6.149474 GCCAAAATCAAGAGTGTCTTTAGCTA 59.851 38.462 0.00 0.00 33.78 3.32
2994 9370 4.275936 GCAAGCCTGAAACTTCTGTCTAAA 59.724 41.667 0.00 0.00 0.00 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.