Multiple sequence alignment - TraesCS3D01G104000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G104000 chr3D 100.000 4025 0 0 1 4025 56688031 56684007 0.000000e+00 7433
1 TraesCS3D01G104000 chr3D 98.909 550 6 0 3476 4025 490682176 490681627 0.000000e+00 983
2 TraesCS3D01G104000 chr3D 95.098 306 15 0 1 306 182983081 182983386 2.180000e-132 483
3 TraesCS3D01G104000 chr3D 95.380 303 14 0 1 303 398855447 398855145 2.180000e-132 483
4 TraesCS3D01G104000 chr3D 95.082 305 15 0 1 305 491617080 491616776 7.820000e-132 481
5 TraesCS3D01G104000 chr3D 97.260 73 2 0 3247 3319 490682245 490682173 1.520000e-24 124
6 TraesCS3D01G104000 chr3B 91.530 2987 192 31 307 3286 89355001 89352069 0.000000e+00 4058
7 TraesCS3D01G104000 chr3B 90.972 2747 147 42 584 3319 89092640 89095296 0.000000e+00 3605
8 TraesCS3D01G104000 chr3B 87.072 263 34 0 1941 2203 89097025 89097287 8.460000e-77 298
9 TraesCS3D01G104000 chr3B 93.865 163 10 0 3323 3485 540175084 540174922 3.110000e-61 246
10 TraesCS3D01G104000 chr3B 85.714 189 13 6 338 526 89071234 89071408 1.910000e-43 187
11 TraesCS3D01G104000 chr3A 89.723 3036 201 43 297 3319 66061714 66064651 0.000000e+00 3775
12 TraesCS3D01G104000 chr3A 90.476 189 14 4 3310 3496 659527222 659527408 3.110000e-61 246
13 TraesCS3D01G104000 chr6D 99.091 550 5 0 3476 4025 18949973 18950522 0.000000e+00 989
14 TraesCS3D01G104000 chr6D 94.839 310 16 0 1 310 459199470 459199161 6.050000e-133 484
15 TraesCS3D01G104000 chr6D 96.053 76 3 0 3244 3319 18949901 18949976 1.520000e-24 124
16 TraesCS3D01G104000 chr5D 99.091 550 5 0 3476 4025 39667070 39666521 0.000000e+00 989
17 TraesCS3D01G104000 chr5D 99.091 550 5 0 3476 4025 53887638 53887089 0.000000e+00 989
18 TraesCS3D01G104000 chr5D 97.059 170 4 1 3314 3483 519454386 519454218 6.580000e-73 285
19 TraesCS3D01G104000 chr5D 96.951 164 5 0 3317 3480 478215987 478215824 3.960000e-70 276
20 TraesCS3D01G104000 chr5D 97.260 73 2 0 3247 3319 53887707 53887635 1.520000e-24 124
21 TraesCS3D01G104000 chr2D 99.091 550 5 0 3476 4025 193902040 193902589 0.000000e+00 989
22 TraesCS3D01G104000 chr2D 99.091 550 5 0 3476 4025 465784067 465783518 0.000000e+00 989
23 TraesCS3D01G104000 chr7D 99.086 547 5 0 3476 4022 124864859 124865405 0.000000e+00 983
24 TraesCS3D01G104000 chr7D 95.752 306 13 0 1 306 451263593 451263288 1.000000e-135 494
25 TraesCS3D01G104000 chr1D 98.909 550 6 0 3476 4025 394221797 394221248 0.000000e+00 983
26 TraesCS3D01G104000 chr1D 98.909 550 6 0 3476 4025 428761414 428761963 0.000000e+00 983
27 TraesCS3D01G104000 chr1D 95.082 305 15 0 1 305 253294618 253294314 7.820000e-132 481
28 TraesCS3D01G104000 chr1D 97.260 73 2 0 3247 3319 266861270 266861198 1.520000e-24 124
29 TraesCS3D01G104000 chr1D 97.260 73 2 0 3247 3319 394221866 394221794 1.520000e-24 124
30 TraesCS3D01G104000 chr5B 95.050 303 15 0 1 303 26850806 26850504 1.010000e-130 477
31 TraesCS3D01G104000 chr4A 95.050 303 15 0 1 303 714743336 714743638 1.010000e-130 477
32 TraesCS3D01G104000 chr4A 95.031 161 8 0 3323 3483 663311778 663311618 1.860000e-63 254
33 TraesCS3D01G104000 chr4D 94.771 306 14 2 1 305 163563051 163562747 3.640000e-130 475
34 TraesCS3D01G104000 chr4D 95.294 170 8 0 3309 3478 54798430 54798599 1.840000e-68 270
35 TraesCS3D01G104000 chr4D 97.260 73 2 0 3247 3319 27891678 27891606 1.520000e-24 124
36 TraesCS3D01G104000 chr6A 94.611 167 9 0 3317 3483 495353519 495353685 3.990000e-65 259
37 TraesCS3D01G104000 chr6B 94.083 169 10 0 3317 3485 708822401 708822569 1.440000e-64 257
38 TraesCS3D01G104000 chr2A 94.545 165 8 1 3315 3479 700986072 700986235 1.860000e-63 254


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G104000 chr3D 56684007 56688031 4024 True 7433.0 7433 100.0000 1 4025 1 chr3D.!!$R1 4024
1 TraesCS3D01G104000 chr3D 490681627 490682245 618 True 553.5 983 98.0845 3247 4025 2 chr3D.!!$R4 778
2 TraesCS3D01G104000 chr3B 89352069 89355001 2932 True 4058.0 4058 91.5300 307 3286 1 chr3B.!!$R1 2979
3 TraesCS3D01G104000 chr3B 89092640 89097287 4647 False 1951.5 3605 89.0220 584 3319 2 chr3B.!!$F2 2735
4 TraesCS3D01G104000 chr3A 66061714 66064651 2937 False 3775.0 3775 89.7230 297 3319 1 chr3A.!!$F1 3022
5 TraesCS3D01G104000 chr6D 18949901 18950522 621 False 556.5 989 97.5720 3244 4025 2 chr6D.!!$F1 781
6 TraesCS3D01G104000 chr5D 39666521 39667070 549 True 989.0 989 99.0910 3476 4025 1 chr5D.!!$R1 549
7 TraesCS3D01G104000 chr5D 53887089 53887707 618 True 556.5 989 98.1755 3247 4025 2 chr5D.!!$R4 778
8 TraesCS3D01G104000 chr2D 193902040 193902589 549 False 989.0 989 99.0910 3476 4025 1 chr2D.!!$F1 549
9 TraesCS3D01G104000 chr2D 465783518 465784067 549 True 989.0 989 99.0910 3476 4025 1 chr2D.!!$R1 549
10 TraesCS3D01G104000 chr7D 124864859 124865405 546 False 983.0 983 99.0860 3476 4022 1 chr7D.!!$F1 546
11 TraesCS3D01G104000 chr1D 428761414 428761963 549 False 983.0 983 98.9090 3476 4025 1 chr1D.!!$F1 549
12 TraesCS3D01G104000 chr1D 394221248 394221866 618 True 553.5 983 98.0845 3247 4025 2 chr1D.!!$R3 778

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
127 128 0.033504 ACAATGTGAAGGCGTCGTCT 59.966 50.0 4.26 0.0 0.00 4.18 F
449 453 0.107312 TAGCTAGAGAACGACGGCCT 60.107 55.0 0.00 0.0 0.00 5.19 F
1070 1115 0.035458 CTCGTTCTGCTTCCCCTTGT 59.965 55.0 0.00 0.0 0.00 3.16 F
2604 2652 0.178068 GGAAGGCATCCGCTCTTACA 59.822 55.0 0.00 0.0 38.79 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1070 1115 0.388659 GTTGCTGGTTGTGGATGCAA 59.611 50.0 0.00 0.0 40.65 4.08 R
2178 2226 0.249120 TGACAACCTCCGCGATGAAT 59.751 50.0 8.23 0.0 0.00 2.57 R
2889 2937 0.035458 AGTGTGCTGGTGTTAGCTCC 59.965 55.0 0.00 0.0 44.01 4.70 R
3841 3904 0.246360 CGGTATCCAGCACTGTGTCA 59.754 55.0 9.86 0.0 0.00 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.432759 GTTTTTCACGACGTGAGCC 57.567 52.632 27.75 14.60 43.69 4.70
24 25 0.935196 GTTTTTCACGACGTGAGCCT 59.065 50.000 27.75 0.00 43.69 4.58
25 26 2.129607 GTTTTTCACGACGTGAGCCTA 58.870 47.619 27.75 12.93 43.69 3.93
26 27 2.512485 TTTTCACGACGTGAGCCTAA 57.488 45.000 27.75 17.84 43.69 2.69
27 28 2.512485 TTTCACGACGTGAGCCTAAA 57.488 45.000 27.75 17.50 43.69 1.85
28 29 2.512485 TTCACGACGTGAGCCTAAAA 57.488 45.000 27.75 11.12 43.69 1.52
29 30 1.774639 TCACGACGTGAGCCTAAAAC 58.225 50.000 26.04 0.00 37.67 2.43
30 31 1.067364 TCACGACGTGAGCCTAAAACA 59.933 47.619 26.04 0.36 37.67 2.83
31 32 1.455786 CACGACGTGAGCCTAAAACAG 59.544 52.381 23.39 0.00 35.23 3.16
32 33 3.740009 CACGACGTGAGCCTAAAACAGG 61.740 54.545 23.39 0.00 40.88 4.00
41 42 1.600023 CCTAAAACAGGCGTCCAACA 58.400 50.000 0.00 0.00 37.70 3.33
42 43 1.535462 CCTAAAACAGGCGTCCAACAG 59.465 52.381 0.00 0.00 37.70 3.16
43 44 0.948678 TAAAACAGGCGTCCAACAGC 59.051 50.000 0.00 0.00 0.00 4.40
44 45 0.751643 AAAACAGGCGTCCAACAGCT 60.752 50.000 0.00 0.00 0.00 4.24
45 46 0.751643 AAACAGGCGTCCAACAGCTT 60.752 50.000 0.00 0.00 0.00 3.74
46 47 1.447317 AACAGGCGTCCAACAGCTTG 61.447 55.000 0.00 0.00 44.52 4.01
47 48 1.893808 CAGGCGTCCAACAGCTTGT 60.894 57.895 0.00 0.00 36.00 3.16
48 49 1.598130 AGGCGTCCAACAGCTTGTC 60.598 57.895 0.00 0.00 0.00 3.18
49 50 1.598130 GGCGTCCAACAGCTTGTCT 60.598 57.895 0.00 0.00 0.00 3.41
50 51 0.320421 GGCGTCCAACAGCTTGTCTA 60.320 55.000 0.00 0.00 0.00 2.59
51 52 1.676014 GGCGTCCAACAGCTTGTCTAT 60.676 52.381 0.00 0.00 0.00 1.98
52 53 2.418197 GGCGTCCAACAGCTTGTCTATA 60.418 50.000 0.00 0.00 0.00 1.31
53 54 3.458189 GCGTCCAACAGCTTGTCTATAT 58.542 45.455 0.00 0.00 0.00 0.86
54 55 3.246226 GCGTCCAACAGCTTGTCTATATG 59.754 47.826 0.00 0.00 0.00 1.78
55 56 3.804325 CGTCCAACAGCTTGTCTATATGG 59.196 47.826 0.00 0.00 0.00 2.74
56 57 4.680708 CGTCCAACAGCTTGTCTATATGGT 60.681 45.833 0.00 0.00 0.00 3.55
57 58 4.811557 GTCCAACAGCTTGTCTATATGGTC 59.188 45.833 0.00 0.00 0.00 4.02
58 59 3.804325 CCAACAGCTTGTCTATATGGTCG 59.196 47.826 0.00 0.00 0.00 4.79
59 60 4.433615 CAACAGCTTGTCTATATGGTCGT 58.566 43.478 0.00 0.00 0.00 4.34
60 61 4.308899 ACAGCTTGTCTATATGGTCGTC 57.691 45.455 0.00 0.00 0.00 4.20
61 62 3.068307 ACAGCTTGTCTATATGGTCGTCC 59.932 47.826 0.00 0.00 0.00 4.79
75 76 4.699637 TGGTCGTCCAAATATACACATCC 58.300 43.478 0.00 0.00 41.25 3.51
76 77 4.407621 TGGTCGTCCAAATATACACATCCT 59.592 41.667 0.00 0.00 41.25 3.24
77 78 4.989168 GGTCGTCCAAATATACACATCCTC 59.011 45.833 0.00 0.00 0.00 3.71
78 79 5.221461 GGTCGTCCAAATATACACATCCTCT 60.221 44.000 0.00 0.00 0.00 3.69
79 80 6.015688 GGTCGTCCAAATATACACATCCTCTA 60.016 42.308 0.00 0.00 0.00 2.43
80 81 7.431249 GTCGTCCAAATATACACATCCTCTAA 58.569 38.462 0.00 0.00 0.00 2.10
81 82 7.924412 GTCGTCCAAATATACACATCCTCTAAA 59.076 37.037 0.00 0.00 0.00 1.85
82 83 8.647796 TCGTCCAAATATACACATCCTCTAAAT 58.352 33.333 0.00 0.00 0.00 1.40
83 84 8.926710 CGTCCAAATATACACATCCTCTAAATC 58.073 37.037 0.00 0.00 0.00 2.17
84 85 8.926710 GTCCAAATATACACATCCTCTAAATCG 58.073 37.037 0.00 0.00 0.00 3.34
85 86 8.866093 TCCAAATATACACATCCTCTAAATCGA 58.134 33.333 0.00 0.00 0.00 3.59
86 87 8.926710 CCAAATATACACATCCTCTAAATCGAC 58.073 37.037 0.00 0.00 0.00 4.20
87 88 8.926710 CAAATATACACATCCTCTAAATCGACC 58.073 37.037 0.00 0.00 0.00 4.79
88 89 8.423906 AATATACACATCCTCTAAATCGACCT 57.576 34.615 0.00 0.00 0.00 3.85
89 90 4.657436 ACACATCCTCTAAATCGACCTC 57.343 45.455 0.00 0.00 0.00 3.85
90 91 3.066900 ACACATCCTCTAAATCGACCTCG 59.933 47.826 0.00 0.00 41.45 4.63
100 101 2.648593 TCGACCTCGACAATGTCCA 58.351 52.632 7.91 0.00 44.22 4.02
101 102 0.242825 TCGACCTCGACAATGTCCAC 59.757 55.000 7.91 0.00 44.22 4.02
102 103 1.071019 CGACCTCGACAATGTCCACG 61.071 60.000 7.91 0.00 43.02 4.94
103 104 1.352156 GACCTCGACAATGTCCACGC 61.352 60.000 7.91 0.00 0.00 5.34
104 105 2.100631 CCTCGACAATGTCCACGCC 61.101 63.158 7.91 0.00 0.00 5.68
105 106 1.079819 CTCGACAATGTCCACGCCT 60.080 57.895 7.91 0.00 0.00 5.52
106 107 1.354337 CTCGACAATGTCCACGCCTG 61.354 60.000 7.91 0.00 0.00 4.85
107 108 2.390599 CGACAATGTCCACGCCTGG 61.391 63.158 7.91 0.00 39.23 4.45
108 109 1.003839 GACAATGTCCACGCCTGGA 60.004 57.895 1.10 0.00 45.11 3.86
114 115 3.156714 TCCACGCCTGGACAATGT 58.843 55.556 0.00 0.00 42.15 2.71
115 116 1.302431 TCCACGCCTGGACAATGTG 60.302 57.895 0.00 0.00 42.15 3.21
116 117 1.302431 CCACGCCTGGACAATGTGA 60.302 57.895 0.00 0.00 40.55 3.58
117 118 0.888736 CCACGCCTGGACAATGTGAA 60.889 55.000 0.00 0.00 40.55 3.18
118 119 0.518636 CACGCCTGGACAATGTGAAG 59.481 55.000 0.00 0.00 32.39 3.02
119 120 0.606401 ACGCCTGGACAATGTGAAGG 60.606 55.000 0.00 6.59 0.00 3.46
120 121 1.885871 GCCTGGACAATGTGAAGGC 59.114 57.895 17.00 17.00 46.04 4.35
121 122 1.926511 GCCTGGACAATGTGAAGGCG 61.927 60.000 17.00 0.00 43.64 5.52
122 123 0.606401 CCTGGACAATGTGAAGGCGT 60.606 55.000 0.00 0.00 0.00 5.68
123 124 0.798776 CTGGACAATGTGAAGGCGTC 59.201 55.000 0.00 0.00 0.00 5.19
124 125 0.948623 TGGACAATGTGAAGGCGTCG 60.949 55.000 0.00 0.00 0.00 5.12
125 126 0.949105 GGACAATGTGAAGGCGTCGT 60.949 55.000 0.00 0.00 0.00 4.34
126 127 0.438830 GACAATGTGAAGGCGTCGTC 59.561 55.000 0.00 0.00 0.00 4.20
127 128 0.033504 ACAATGTGAAGGCGTCGTCT 59.966 50.000 4.26 0.00 0.00 4.18
128 129 1.271379 ACAATGTGAAGGCGTCGTCTA 59.729 47.619 0.00 0.00 0.00 2.59
129 130 2.288579 ACAATGTGAAGGCGTCGTCTAA 60.289 45.455 0.00 0.00 0.00 2.10
130 131 2.734606 CAATGTGAAGGCGTCGTCTAAA 59.265 45.455 0.00 0.00 0.00 1.85
131 132 1.774639 TGTGAAGGCGTCGTCTAAAC 58.225 50.000 0.00 2.11 0.00 2.01
132 133 1.338973 TGTGAAGGCGTCGTCTAAACT 59.661 47.619 0.00 0.00 0.00 2.66
133 134 1.984297 GTGAAGGCGTCGTCTAAACTC 59.016 52.381 0.00 0.00 0.00 3.01
134 135 1.610038 TGAAGGCGTCGTCTAAACTCA 59.390 47.619 0.00 0.00 0.00 3.41
135 136 2.251893 GAAGGCGTCGTCTAAACTCAG 58.748 52.381 0.00 0.00 0.00 3.35
136 137 0.109226 AGGCGTCGTCTAAACTCAGC 60.109 55.000 0.00 0.00 0.00 4.26
137 138 0.109226 GGCGTCGTCTAAACTCAGCT 60.109 55.000 0.00 0.00 0.00 4.24
138 139 0.985549 GCGTCGTCTAAACTCAGCTG 59.014 55.000 7.63 7.63 0.00 4.24
139 140 0.985549 CGTCGTCTAAACTCAGCTGC 59.014 55.000 9.47 0.00 0.00 5.25
140 141 1.666023 CGTCGTCTAAACTCAGCTGCA 60.666 52.381 9.47 0.00 0.00 4.41
141 142 1.989165 GTCGTCTAAACTCAGCTGCAG 59.011 52.381 10.11 10.11 0.00 4.41
142 143 1.613925 TCGTCTAAACTCAGCTGCAGT 59.386 47.619 16.64 10.78 0.00 4.40
143 144 1.989165 CGTCTAAACTCAGCTGCAGTC 59.011 52.381 16.64 7.83 0.00 3.51
144 145 2.608016 CGTCTAAACTCAGCTGCAGTCA 60.608 50.000 16.64 4.94 0.00 3.41
145 146 3.594134 GTCTAAACTCAGCTGCAGTCAT 58.406 45.455 16.64 8.81 0.00 3.06
146 147 3.370366 GTCTAAACTCAGCTGCAGTCATG 59.630 47.826 16.64 12.05 0.00 3.07
147 148 2.556144 AAACTCAGCTGCAGTCATGA 57.444 45.000 16.64 15.53 0.00 3.07
148 149 2.783609 AACTCAGCTGCAGTCATGAT 57.216 45.000 16.64 1.24 0.00 2.45
149 150 2.783609 ACTCAGCTGCAGTCATGATT 57.216 45.000 16.64 8.88 0.00 2.57
150 151 3.069079 ACTCAGCTGCAGTCATGATTT 57.931 42.857 16.64 5.14 0.00 2.17
151 152 3.008330 ACTCAGCTGCAGTCATGATTTC 58.992 45.455 16.64 0.00 0.00 2.17
152 153 3.271729 CTCAGCTGCAGTCATGATTTCT 58.728 45.455 16.64 0.00 0.00 2.52
153 154 3.682696 TCAGCTGCAGTCATGATTTCTT 58.317 40.909 16.64 0.00 0.00 2.52
154 155 3.688185 TCAGCTGCAGTCATGATTTCTTC 59.312 43.478 16.64 0.00 0.00 2.87
155 156 3.015327 AGCTGCAGTCATGATTTCTTCC 58.985 45.455 16.64 0.00 0.00 3.46
156 157 3.015327 GCTGCAGTCATGATTTCTTCCT 58.985 45.455 16.64 0.00 0.00 3.36
157 158 3.065095 GCTGCAGTCATGATTTCTTCCTC 59.935 47.826 16.64 0.00 0.00 3.71
158 159 4.515361 CTGCAGTCATGATTTCTTCCTCT 58.485 43.478 5.25 0.00 0.00 3.69
159 160 4.511527 TGCAGTCATGATTTCTTCCTCTC 58.488 43.478 0.00 0.00 0.00 3.20
160 161 3.876320 GCAGTCATGATTTCTTCCTCTCC 59.124 47.826 0.00 0.00 0.00 3.71
161 162 4.450053 CAGTCATGATTTCTTCCTCTCCC 58.550 47.826 0.00 0.00 0.00 4.30
162 163 3.457749 AGTCATGATTTCTTCCTCTCCCC 59.542 47.826 0.00 0.00 0.00 4.81
163 164 3.200825 GTCATGATTTCTTCCTCTCCCCA 59.799 47.826 0.00 0.00 0.00 4.96
164 165 3.457380 TCATGATTTCTTCCTCTCCCCAG 59.543 47.826 0.00 0.00 0.00 4.45
165 166 1.561542 TGATTTCTTCCTCTCCCCAGC 59.438 52.381 0.00 0.00 0.00 4.85
166 167 0.543749 ATTTCTTCCTCTCCCCAGCG 59.456 55.000 0.00 0.00 0.00 5.18
167 168 0.544357 TTTCTTCCTCTCCCCAGCGA 60.544 55.000 0.00 0.00 0.00 4.93
168 169 1.258445 TTCTTCCTCTCCCCAGCGAC 61.258 60.000 0.00 0.00 0.00 5.19
169 170 3.068691 TTCCTCTCCCCAGCGACG 61.069 66.667 0.00 0.00 0.00 5.12
182 183 4.082523 CGACGGCCCACCTGTCAT 62.083 66.667 0.00 0.00 38.56 3.06
183 184 2.436646 GACGGCCCACCTGTCATG 60.437 66.667 0.00 0.00 38.53 3.07
184 185 3.976701 GACGGCCCACCTGTCATGG 62.977 68.421 0.00 0.00 38.53 3.66
185 186 4.033776 CGGCCCACCTGTCATGGT 62.034 66.667 0.00 0.00 41.77 3.55
186 187 2.044946 GGCCCACCTGTCATGGTC 60.045 66.667 0.00 0.00 38.45 4.02
187 188 2.044946 GCCCACCTGTCATGGTCC 60.045 66.667 0.00 0.00 38.45 4.46
188 189 2.677228 CCCACCTGTCATGGTCCC 59.323 66.667 0.00 0.00 38.45 4.46
189 190 1.925455 CCCACCTGTCATGGTCCCT 60.925 63.158 0.00 0.00 38.45 4.20
190 191 1.300963 CCACCTGTCATGGTCCCTG 59.699 63.158 0.00 0.00 38.45 4.45
191 192 1.492133 CCACCTGTCATGGTCCCTGT 61.492 60.000 0.00 0.00 38.45 4.00
192 193 1.275666 CACCTGTCATGGTCCCTGTA 58.724 55.000 0.00 0.00 38.45 2.74
193 194 1.839994 CACCTGTCATGGTCCCTGTAT 59.160 52.381 0.00 0.00 38.45 2.29
194 195 3.038280 CACCTGTCATGGTCCCTGTATA 58.962 50.000 0.00 0.00 38.45 1.47
195 196 3.648067 CACCTGTCATGGTCCCTGTATAT 59.352 47.826 0.00 0.00 38.45 0.86
196 197 4.838423 CACCTGTCATGGTCCCTGTATATA 59.162 45.833 0.00 0.00 38.45 0.86
197 198 5.047021 CACCTGTCATGGTCCCTGTATATAG 60.047 48.000 0.00 0.00 38.45 1.31
198 199 5.162870 ACCTGTCATGGTCCCTGTATATAGA 60.163 44.000 0.00 0.00 34.86 1.98
199 200 5.186021 CCTGTCATGGTCCCTGTATATAGAC 59.814 48.000 0.00 0.00 0.00 2.59
200 201 4.765339 TGTCATGGTCCCTGTATATAGACG 59.235 45.833 0.00 0.00 0.00 4.18
201 202 4.765856 GTCATGGTCCCTGTATATAGACGT 59.234 45.833 0.00 0.00 0.00 4.34
202 203 5.243283 GTCATGGTCCCTGTATATAGACGTT 59.757 44.000 0.00 0.00 0.00 3.99
203 204 5.475909 TCATGGTCCCTGTATATAGACGTTC 59.524 44.000 0.00 0.00 0.00 3.95
204 205 5.057843 TGGTCCCTGTATATAGACGTTCT 57.942 43.478 0.00 0.00 0.00 3.01
205 206 4.825634 TGGTCCCTGTATATAGACGTTCTG 59.174 45.833 0.00 0.00 0.00 3.02
206 207 5.068636 GGTCCCTGTATATAGACGTTCTGA 58.931 45.833 0.00 0.00 0.00 3.27
207 208 5.711036 GGTCCCTGTATATAGACGTTCTGAT 59.289 44.000 0.00 0.00 0.00 2.90
208 209 6.349445 GGTCCCTGTATATAGACGTTCTGATG 60.349 46.154 0.00 0.00 0.00 3.07
209 210 5.183331 TCCCTGTATATAGACGTTCTGATGC 59.817 44.000 0.00 0.00 0.00 3.91
210 211 5.048013 CCCTGTATATAGACGTTCTGATGCA 60.048 44.000 0.00 0.00 0.00 3.96
211 212 6.447162 CCTGTATATAGACGTTCTGATGCAA 58.553 40.000 0.00 0.00 0.00 4.08
212 213 6.584184 CCTGTATATAGACGTTCTGATGCAAG 59.416 42.308 0.00 0.00 0.00 4.01
213 214 7.272037 TGTATATAGACGTTCTGATGCAAGA 57.728 36.000 0.00 0.00 0.00 3.02
214 215 7.886338 TGTATATAGACGTTCTGATGCAAGAT 58.114 34.615 0.00 0.00 0.00 2.40
215 216 8.360390 TGTATATAGACGTTCTGATGCAAGATT 58.640 33.333 0.00 0.00 0.00 2.40
216 217 5.980698 ATAGACGTTCTGATGCAAGATTG 57.019 39.130 0.00 0.00 0.00 2.67
217 218 3.005554 AGACGTTCTGATGCAAGATTGG 58.994 45.455 0.00 0.00 0.00 3.16
218 219 3.002791 GACGTTCTGATGCAAGATTGGA 58.997 45.455 0.00 0.00 0.00 3.53
219 220 2.744202 ACGTTCTGATGCAAGATTGGAC 59.256 45.455 0.00 0.00 0.00 4.02
220 221 2.222886 CGTTCTGATGCAAGATTGGACG 60.223 50.000 0.00 0.00 0.00 4.79
221 222 2.744202 GTTCTGATGCAAGATTGGACGT 59.256 45.455 0.00 0.00 0.00 4.34
222 223 2.349590 TCTGATGCAAGATTGGACGTG 58.650 47.619 0.00 0.00 0.00 4.49
223 224 2.079158 CTGATGCAAGATTGGACGTGT 58.921 47.619 0.00 0.00 0.00 4.49
224 225 3.056179 TCTGATGCAAGATTGGACGTGTA 60.056 43.478 0.00 0.00 0.00 2.90
225 226 3.872696 TGATGCAAGATTGGACGTGTAT 58.127 40.909 0.00 0.00 0.00 2.29
226 227 5.017294 TGATGCAAGATTGGACGTGTATA 57.983 39.130 0.00 0.00 0.00 1.47
227 228 5.610398 TGATGCAAGATTGGACGTGTATAT 58.390 37.500 0.00 0.00 0.00 0.86
228 229 5.466393 TGATGCAAGATTGGACGTGTATATG 59.534 40.000 0.00 0.00 0.00 1.78
229 230 5.017294 TGCAAGATTGGACGTGTATATGA 57.983 39.130 0.00 0.00 0.00 2.15
230 231 5.423886 TGCAAGATTGGACGTGTATATGAA 58.576 37.500 0.00 0.00 0.00 2.57
231 232 5.523552 TGCAAGATTGGACGTGTATATGAAG 59.476 40.000 0.00 0.00 0.00 3.02
232 233 5.050091 GCAAGATTGGACGTGTATATGAAGG 60.050 44.000 0.00 0.00 0.00 3.46
233 234 6.280643 CAAGATTGGACGTGTATATGAAGGA 58.719 40.000 0.00 0.00 0.00 3.36
234 235 6.479972 AGATTGGACGTGTATATGAAGGAA 57.520 37.500 0.00 0.00 0.00 3.36
235 236 7.067496 AGATTGGACGTGTATATGAAGGAAT 57.933 36.000 0.00 0.00 0.00 3.01
236 237 7.155328 AGATTGGACGTGTATATGAAGGAATC 58.845 38.462 0.00 0.00 0.00 2.52
237 238 6.479972 TTGGACGTGTATATGAAGGAATCT 57.520 37.500 0.00 0.00 0.00 2.40
238 239 6.479972 TGGACGTGTATATGAAGGAATCTT 57.520 37.500 0.00 0.00 35.62 2.40
239 240 6.884832 TGGACGTGTATATGAAGGAATCTTT 58.115 36.000 0.00 0.00 32.52 2.52
240 241 7.335627 TGGACGTGTATATGAAGGAATCTTTT 58.664 34.615 0.00 0.00 32.52 2.27
241 242 7.827236 TGGACGTGTATATGAAGGAATCTTTTT 59.173 33.333 0.00 0.00 32.52 1.94
242 243 9.321562 GGACGTGTATATGAAGGAATCTTTTTA 57.678 33.333 0.00 0.00 32.52 1.52
251 252 8.655935 ATGAAGGAATCTTTTTAGACCATTGT 57.344 30.769 0.00 0.00 32.52 2.71
252 253 8.110860 TGAAGGAATCTTTTTAGACCATTGTC 57.889 34.615 0.00 0.00 36.12 3.18
253 254 7.944554 TGAAGGAATCTTTTTAGACCATTGTCT 59.055 33.333 4.66 4.66 42.98 3.41
254 255 9.449719 GAAGGAATCTTTTTAGACCATTGTCTA 57.550 33.333 2.58 2.58 41.72 2.59
328 329 7.463961 ACGTAGAGGATGAAGAAAACTCTAA 57.536 36.000 0.00 0.00 41.04 2.10
335 336 9.471084 GAGGATGAAGAAAACTCTAAGCTATAC 57.529 37.037 0.00 0.00 0.00 1.47
336 337 8.425703 AGGATGAAGAAAACTCTAAGCTATACC 58.574 37.037 0.00 0.00 0.00 2.73
381 385 3.934391 GACCACCTCAGGTTCGGCG 62.934 68.421 0.00 0.00 43.38 6.46
390 394 1.666872 AGGTTCGGCGGAAAAGTCG 60.667 57.895 7.21 0.00 41.09 4.18
448 452 0.308376 CTAGCTAGAGAACGACGGCC 59.692 60.000 16.15 0.00 0.00 6.13
449 453 0.107312 TAGCTAGAGAACGACGGCCT 60.107 55.000 0.00 0.00 0.00 5.19
459 463 2.264794 GACGGCCTGGATTGACGT 59.735 61.111 0.00 0.00 40.85 4.34
460 464 2.047274 ACGGCCTGGATTGACGTG 60.047 61.111 0.00 0.00 36.32 4.49
476 480 2.201732 ACGTGGACGAATCATGCATAC 58.798 47.619 6.12 0.00 43.02 2.39
477 481 1.526887 CGTGGACGAATCATGCATACC 59.473 52.381 0.00 0.00 43.02 2.73
478 482 1.526887 GTGGACGAATCATGCATACCG 59.473 52.381 0.00 3.27 0.00 4.02
479 483 1.148310 GGACGAATCATGCATACCGG 58.852 55.000 0.00 0.00 0.00 5.28
522 526 7.907389 ACTATTCAGACTTATCACCAACAGAA 58.093 34.615 0.00 0.00 0.00 3.02
523 527 8.037758 ACTATTCAGACTTATCACCAACAGAAG 58.962 37.037 0.00 0.00 0.00 2.85
524 528 5.808366 TCAGACTTATCACCAACAGAAGT 57.192 39.130 0.00 0.00 33.14 3.01
525 529 5.541845 TCAGACTTATCACCAACAGAAGTG 58.458 41.667 0.00 0.00 30.66 3.16
526 530 4.153117 CAGACTTATCACCAACAGAAGTGC 59.847 45.833 0.00 0.00 33.90 4.40
527 531 3.412386 ACTTATCACCAACAGAAGTGCC 58.588 45.455 0.00 0.00 33.90 5.01
528 532 3.181445 ACTTATCACCAACAGAAGTGCCA 60.181 43.478 0.00 0.00 33.90 4.92
529 533 2.363306 ATCACCAACAGAAGTGCCAA 57.637 45.000 0.00 0.00 33.90 4.52
530 534 1.388547 TCACCAACAGAAGTGCCAAC 58.611 50.000 0.00 0.00 33.90 3.77
531 535 1.102154 CACCAACAGAAGTGCCAACA 58.898 50.000 0.00 0.00 0.00 3.33
532 536 1.066002 CACCAACAGAAGTGCCAACAG 59.934 52.381 0.00 0.00 0.00 3.16
533 537 1.064758 ACCAACAGAAGTGCCAACAGA 60.065 47.619 0.00 0.00 0.00 3.41
534 538 2.023673 CCAACAGAAGTGCCAACAGAA 58.976 47.619 0.00 0.00 0.00 3.02
535 539 2.426738 CCAACAGAAGTGCCAACAGAAA 59.573 45.455 0.00 0.00 0.00 2.52
536 540 3.489738 CCAACAGAAGTGCCAACAGAAAG 60.490 47.826 0.00 0.00 0.00 2.62
537 541 3.281727 ACAGAAGTGCCAACAGAAAGA 57.718 42.857 0.00 0.00 0.00 2.52
538 542 3.825328 ACAGAAGTGCCAACAGAAAGAT 58.175 40.909 0.00 0.00 0.00 2.40
539 543 3.567164 ACAGAAGTGCCAACAGAAAGATG 59.433 43.478 0.00 0.00 0.00 2.90
540 544 3.057736 CAGAAGTGCCAACAGAAAGATGG 60.058 47.826 0.00 0.00 42.74 3.51
541 545 2.957402 AGTGCCAACAGAAAGATGGA 57.043 45.000 0.00 0.00 42.49 3.41
542 546 3.446442 AGTGCCAACAGAAAGATGGAT 57.554 42.857 0.00 0.00 42.49 3.41
543 547 3.087031 AGTGCCAACAGAAAGATGGATG 58.913 45.455 0.00 0.00 42.49 3.51
544 548 2.821969 GTGCCAACAGAAAGATGGATGT 59.178 45.455 0.00 0.00 42.49 3.06
580 606 7.212976 TGCTATTCTACTTTCTGGCTTGATAG 58.787 38.462 0.00 0.00 0.00 2.08
661 688 0.179108 GCCTAGTGGTTGCCGTCTAG 60.179 60.000 8.92 8.92 33.69 2.43
754 782 7.224949 CCGTATCTAGGAAGAAAATTGAACCTC 59.775 40.741 0.00 0.00 34.73 3.85
762 790 5.066913 AGAAAATTGAACCTCTTGGACCT 57.933 39.130 0.00 0.00 37.04 3.85
780 809 3.594134 ACCTCTTTCTCTTCGATTGCAG 58.406 45.455 0.00 0.00 0.00 4.41
849 878 9.394767 TCCTAAATTTTACGGATTTACCTTACC 57.605 33.333 0.00 0.00 36.31 2.85
854 883 6.855763 TTTACGGATTTACCTTACCTCTGA 57.144 37.500 0.00 0.00 36.31 3.27
855 884 6.461110 TTACGGATTTACCTTACCTCTGAG 57.539 41.667 0.00 0.00 36.31 3.35
857 886 5.513233 ACGGATTTACCTTACCTCTGAGTA 58.487 41.667 3.66 0.00 36.31 2.59
858 887 5.593502 ACGGATTTACCTTACCTCTGAGTAG 59.406 44.000 3.66 0.00 36.31 2.57
859 888 5.507650 CGGATTTACCTTACCTCTGAGTAGC 60.508 48.000 3.66 0.00 36.31 3.58
860 889 4.978083 TTTACCTTACCTCTGAGTAGCG 57.022 45.455 3.66 0.00 0.00 4.26
866 896 0.748367 ACCTCTGAGTAGCGCATCGA 60.748 55.000 11.47 6.00 0.00 3.59
916 946 4.075854 TCGGGCGCACATACAGCA 62.076 61.111 11.77 0.00 0.00 4.41
917 947 3.566853 CGGGCGCACATACAGCAG 61.567 66.667 11.77 0.00 0.00 4.24
918 948 2.436646 GGGCGCACATACAGCAGT 60.437 61.111 10.83 0.00 0.00 4.40
1010 1055 1.809869 CTCGAGACATGGCTCCGAA 59.190 57.895 23.11 7.82 0.00 4.30
1034 1079 1.067821 GCACATCTTCCTCCTCCTACG 59.932 57.143 0.00 0.00 0.00 3.51
1035 1080 2.379972 CACATCTTCCTCCTCCTACGT 58.620 52.381 0.00 0.00 0.00 3.57
1036 1081 2.359531 CACATCTTCCTCCTCCTACGTC 59.640 54.545 0.00 0.00 0.00 4.34
1037 1082 1.957877 CATCTTCCTCCTCCTACGTCC 59.042 57.143 0.00 0.00 0.00 4.79
1059 1104 0.176680 CCATCCCACTCCTCGTTCTG 59.823 60.000 0.00 0.00 0.00 3.02
1070 1115 0.035458 CTCGTTCTGCTTCCCCTTGT 59.965 55.000 0.00 0.00 0.00 3.16
1090 1138 1.290009 GCATCCACAACCAGCAACC 59.710 57.895 0.00 0.00 0.00 3.77
1111 1159 5.557866 ACCACAGTTTCAGTTTCCTATACC 58.442 41.667 0.00 0.00 0.00 2.73
1122 1170 4.971924 AGTTTCCTATACCATGGCTTCTCT 59.028 41.667 13.04 0.00 0.00 3.10
1347 1395 4.083862 GCCTTCTTCGTCGCCCCT 62.084 66.667 0.00 0.00 0.00 4.79
1437 1485 1.652012 CAACCACATGTTCGCCGTT 59.348 52.632 0.00 0.00 34.00 4.44
1455 1503 1.691195 TTGAGCTCGACACCACCCAA 61.691 55.000 9.64 0.00 0.00 4.12
1764 1812 4.356442 GCCACAACCGGCGCAATT 62.356 61.111 10.83 0.00 43.52 2.32
1785 1833 0.457853 GCACGATCCACTGCGTTCTA 60.458 55.000 0.00 0.00 38.92 2.10
2076 2124 1.332195 AGGAAAAGAACCTGCTTGGC 58.668 50.000 0.00 0.00 40.22 4.52
2109 2157 1.244816 GCAAGGTGTACAAAGGGACC 58.755 55.000 0.00 0.00 0.00 4.46
2131 2179 3.704061 CCTCCCAAAGTCCAAACTGAAAA 59.296 43.478 0.00 0.00 35.36 2.29
2175 2223 0.984230 AGTCGAGGCAAGGGATGAAA 59.016 50.000 0.00 0.00 0.00 2.69
2178 2226 1.628340 TCGAGGCAAGGGATGAAAGAA 59.372 47.619 0.00 0.00 0.00 2.52
2238 2286 1.074775 CAACCTTGTGCCCCTGCTA 59.925 57.895 0.00 0.00 38.71 3.49
2481 2529 5.117355 ACAGTGAAATGAATGCAAGACTG 57.883 39.130 0.00 0.00 36.48 3.51
2535 2583 1.609208 GCACTGATCCACAAACCACT 58.391 50.000 0.00 0.00 0.00 4.00
2604 2652 0.178068 GGAAGGCATCCGCTCTTACA 59.822 55.000 0.00 0.00 38.79 2.41
2771 2819 1.215647 GACTGCAGGGTCACTACGG 59.784 63.158 19.93 0.00 36.35 4.02
2773 2821 3.989698 CTGCAGGGTCACTACGGCG 62.990 68.421 5.57 4.80 0.00 6.46
2952 3000 2.154462 ACGCAAAACAGAGGATTGGAG 58.846 47.619 0.00 0.00 0.00 3.86
3092 3142 8.770828 TGTTAAAACATCTACTTCCTTCTTTCG 58.229 33.333 0.00 0.00 33.17 3.46
3093 3143 5.864628 AAACATCTACTTCCTTCTTTCGC 57.135 39.130 0.00 0.00 0.00 4.70
3094 3144 4.537135 ACATCTACTTCCTTCTTTCGCA 57.463 40.909 0.00 0.00 0.00 5.10
3095 3145 4.894784 ACATCTACTTCCTTCTTTCGCAA 58.105 39.130 0.00 0.00 0.00 4.85
3096 3146 5.305585 ACATCTACTTCCTTCTTTCGCAAA 58.694 37.500 0.00 0.00 0.00 3.68
3097 3147 5.763204 ACATCTACTTCCTTCTTTCGCAAAA 59.237 36.000 0.00 0.00 0.00 2.44
3098 3148 6.262273 ACATCTACTTCCTTCTTTCGCAAAAA 59.738 34.615 0.00 0.00 0.00 1.94
3213 3269 5.716703 TCACTTCAGATGTTACTCTGGATGA 59.283 40.000 10.33 9.09 42.42 2.92
3255 3311 7.464830 ACTCACGGAGTTAATTAATCAATCG 57.535 36.000 0.31 4.90 40.28 3.34
3258 3314 6.477688 TCACGGAGTTAATTAATCAATCGTCC 59.522 38.462 0.31 0.00 41.61 4.79
3325 3381 4.130286 GCACCTAGCATGTACTTTCTCT 57.870 45.455 0.00 0.00 44.79 3.10
3326 3382 3.868077 GCACCTAGCATGTACTTTCTCTG 59.132 47.826 0.00 0.00 44.79 3.35
3327 3383 4.621747 GCACCTAGCATGTACTTTCTCTGT 60.622 45.833 0.00 0.00 44.79 3.41
3328 3384 5.482908 CACCTAGCATGTACTTTCTCTGTT 58.517 41.667 0.00 0.00 0.00 3.16
3329 3385 5.578727 CACCTAGCATGTACTTTCTCTGTTC 59.421 44.000 0.00 0.00 0.00 3.18
3330 3386 5.112686 CCTAGCATGTACTTTCTCTGTTCC 58.887 45.833 0.00 0.00 0.00 3.62
3331 3387 4.899352 AGCATGTACTTTCTCTGTTCCT 57.101 40.909 0.00 0.00 0.00 3.36
3332 3388 6.096987 CCTAGCATGTACTTTCTCTGTTCCTA 59.903 42.308 0.00 0.00 0.00 2.94
3333 3389 6.360370 AGCATGTACTTTCTCTGTTCCTAA 57.640 37.500 0.00 0.00 0.00 2.69
3334 3390 6.769512 AGCATGTACTTTCTCTGTTCCTAAA 58.230 36.000 0.00 0.00 0.00 1.85
3335 3391 7.398024 AGCATGTACTTTCTCTGTTCCTAAAT 58.602 34.615 0.00 0.00 0.00 1.40
3336 3392 8.540388 AGCATGTACTTTCTCTGTTCCTAAATA 58.460 33.333 0.00 0.00 0.00 1.40
3337 3393 9.331282 GCATGTACTTTCTCTGTTCCTAAATAT 57.669 33.333 0.00 0.00 0.00 1.28
3374 3430 2.036387 TCCACTATGGACCACATACGG 58.964 52.381 0.00 0.00 42.67 4.02
3375 3431 2.036387 CCACTATGGACCACATACGGA 58.964 52.381 0.00 0.00 40.96 4.69
3376 3432 2.035961 CCACTATGGACCACATACGGAG 59.964 54.545 0.00 0.00 40.96 4.63
3377 3433 4.504950 CCACTATGGACCACATACGGAGT 61.505 52.174 0.00 0.00 42.93 3.85
3378 3434 5.230990 CCACTATGGACCACATACGGAGTA 61.231 50.000 0.00 0.00 44.55 2.59
3379 3435 6.673980 CCACTATGGACCACATACGGAGTAA 61.674 48.000 0.00 0.00 43.87 2.24
3380 3436 8.083014 CCACTATGGACCACATACGGAGTAAA 62.083 46.154 0.00 0.00 43.87 2.01
3381 3437 9.461851 CCACTATGGACCACATACGGAGTAAAA 62.462 44.444 0.00 0.00 43.87 1.52
3396 3452 8.699283 ACGGAGTAAAATAAGTGAATCTACAC 57.301 34.615 0.00 0.00 41.94 2.90
3397 3453 8.529476 ACGGAGTAAAATAAGTGAATCTACACT 58.471 33.333 0.00 0.00 46.76 3.55
3407 3463 5.798132 AGTGAATCTACACTCTGAAATGCA 58.202 37.500 0.00 0.00 46.36 3.96
3408 3464 6.413052 AGTGAATCTACACTCTGAAATGCAT 58.587 36.000 0.00 0.00 46.36 3.96
3409 3465 6.538021 AGTGAATCTACACTCTGAAATGCATC 59.462 38.462 0.00 0.00 46.36 3.91
3410 3466 6.538021 GTGAATCTACACTCTGAAATGCATCT 59.462 38.462 0.00 0.00 37.73 2.90
3411 3467 7.708322 GTGAATCTACACTCTGAAATGCATCTA 59.292 37.037 0.00 0.00 37.73 1.98
3412 3468 8.427276 TGAATCTACACTCTGAAATGCATCTAT 58.573 33.333 0.00 0.00 0.00 1.98
3413 3469 9.920133 GAATCTACACTCTGAAATGCATCTATA 57.080 33.333 0.00 0.00 0.00 1.31
3419 3475 9.650539 ACACTCTGAAATGCATCTATATACATC 57.349 33.333 0.00 0.00 0.00 3.06
3420 3476 9.096160 CACTCTGAAATGCATCTATATACATCC 57.904 37.037 0.00 0.00 0.00 3.51
3421 3477 7.978414 ACTCTGAAATGCATCTATATACATCCG 59.022 37.037 0.00 0.00 0.00 4.18
3422 3478 7.840931 TCTGAAATGCATCTATATACATCCGT 58.159 34.615 0.00 0.00 0.00 4.69
3423 3479 8.966868 TCTGAAATGCATCTATATACATCCGTA 58.033 33.333 0.00 0.00 0.00 4.02
3424 3480 9.755804 CTGAAATGCATCTATATACATCCGTAT 57.244 33.333 0.00 0.00 41.34 3.06
3425 3481 9.533253 TGAAATGCATCTATATACATCCGTATG 57.467 33.333 0.00 0.00 38.79 2.39
3427 3483 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
3428 3484 7.639113 TGCATCTATATACATCCGTATGTGA 57.361 36.000 3.56 0.00 45.99 3.58
3429 3485 8.237811 TGCATCTATATACATCCGTATGTGAT 57.762 34.615 3.56 0.26 45.99 3.06
3430 3486 8.352942 TGCATCTATATACATCCGTATGTGATC 58.647 37.037 3.56 0.00 45.99 2.92
3431 3487 7.810282 GCATCTATATACATCCGTATGTGATCC 59.190 40.741 3.56 0.00 45.99 3.36
3432 3488 8.850156 CATCTATATACATCCGTATGTGATCCA 58.150 37.037 3.56 0.00 45.99 3.41
3433 3489 8.996651 TCTATATACATCCGTATGTGATCCAT 57.003 34.615 3.56 0.00 45.99 3.41
3436 3492 8.768501 ATATACATCCGTATGTGATCCATAGT 57.231 34.615 3.56 2.90 45.99 2.12
3437 3493 5.139435 ACATCCGTATGTGATCCATAGTG 57.861 43.478 0.00 5.09 44.79 2.74
3438 3494 4.832823 ACATCCGTATGTGATCCATAGTGA 59.167 41.667 0.00 5.25 44.79 3.41
3439 3495 5.304357 ACATCCGTATGTGATCCATAGTGAA 59.696 40.000 0.00 0.00 44.79 3.18
3440 3496 5.862678 TCCGTATGTGATCCATAGTGAAA 57.137 39.130 4.66 0.00 36.71 2.69
3441 3497 6.419484 TCCGTATGTGATCCATAGTGAAAT 57.581 37.500 4.66 0.00 36.71 2.17
3442 3498 6.455647 TCCGTATGTGATCCATAGTGAAATC 58.544 40.000 4.66 0.00 36.71 2.17
3443 3499 6.267699 TCCGTATGTGATCCATAGTGAAATCT 59.732 38.462 4.66 0.00 36.71 2.40
3444 3500 6.587990 CCGTATGTGATCCATAGTGAAATCTC 59.412 42.308 4.66 0.00 36.71 2.75
3445 3501 7.374272 CGTATGTGATCCATAGTGAAATCTCT 58.626 38.462 4.66 0.00 36.71 3.10
3446 3502 8.515414 CGTATGTGATCCATAGTGAAATCTCTA 58.485 37.037 4.66 0.00 36.71 2.43
3447 3503 9.632807 GTATGTGATCCATAGTGAAATCTCTAC 57.367 37.037 4.66 0.00 36.71 2.59
3448 3504 7.660030 TGTGATCCATAGTGAAATCTCTACA 57.340 36.000 0.00 0.00 0.00 2.74
3449 3505 8.078060 TGTGATCCATAGTGAAATCTCTACAA 57.922 34.615 0.00 0.00 0.00 2.41
3450 3506 8.539544 TGTGATCCATAGTGAAATCTCTACAAA 58.460 33.333 0.00 0.00 0.00 2.83
3451 3507 9.039870 GTGATCCATAGTGAAATCTCTACAAAG 57.960 37.037 0.00 0.00 0.00 2.77
3452 3508 8.981659 TGATCCATAGTGAAATCTCTACAAAGA 58.018 33.333 0.00 0.00 0.00 2.52
3453 3509 9.255304 GATCCATAGTGAAATCTCTACAAAGAC 57.745 37.037 0.00 0.00 0.00 3.01
3454 3510 8.367660 TCCATAGTGAAATCTCTACAAAGACT 57.632 34.615 0.00 0.00 0.00 3.24
3455 3511 8.816894 TCCATAGTGAAATCTCTACAAAGACTT 58.183 33.333 0.00 0.00 0.00 3.01
3471 3527 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
3472 3528 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
3473 3529 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
3474 3530 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
3502 3558 7.939782 ACATGTGAACTCATGAATTTTACACA 58.060 30.769 19.08 10.96 45.41 3.72
3773 3836 3.670627 GCAATTCTACAAAAGGGTCTGCG 60.671 47.826 0.00 0.00 0.00 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 0.935196 AGGCTCACGTCGTGAAAAAC 59.065 50.000 26.79 16.92 42.26 2.43
6 7 2.512485 TAGGCTCACGTCGTGAAAAA 57.488 45.000 26.79 11.48 42.26 1.94
7 8 2.512485 TTAGGCTCACGTCGTGAAAA 57.488 45.000 26.79 16.07 42.26 2.29
8 9 2.512485 TTTAGGCTCACGTCGTGAAA 57.488 45.000 26.79 16.27 42.26 2.69
9 10 2.129607 GTTTTAGGCTCACGTCGTGAA 58.870 47.619 26.79 11.17 42.26 3.18
10 11 1.067364 TGTTTTAGGCTCACGTCGTGA 59.933 47.619 25.51 25.51 40.50 4.35
11 12 1.455786 CTGTTTTAGGCTCACGTCGTG 59.544 52.381 19.38 19.38 34.45 4.35
12 13 1.604693 CCTGTTTTAGGCTCACGTCGT 60.605 52.381 0.00 0.00 40.38 4.34
13 14 1.068474 CCTGTTTTAGGCTCACGTCG 58.932 55.000 0.00 0.00 40.38 5.12
23 24 1.069227 GCTGTTGGACGCCTGTTTTAG 60.069 52.381 0.00 0.00 0.00 1.85
24 25 0.948678 GCTGTTGGACGCCTGTTTTA 59.051 50.000 0.00 0.00 0.00 1.52
25 26 0.751643 AGCTGTTGGACGCCTGTTTT 60.752 50.000 0.00 0.00 0.00 2.43
26 27 0.751643 AAGCTGTTGGACGCCTGTTT 60.752 50.000 0.00 0.00 0.00 2.83
27 28 1.152963 AAGCTGTTGGACGCCTGTT 60.153 52.632 0.00 0.00 0.00 3.16
28 29 1.893808 CAAGCTGTTGGACGCCTGT 60.894 57.895 0.00 0.00 0.00 4.00
29 30 1.845809 GACAAGCTGTTGGACGCCTG 61.846 60.000 0.00 0.00 38.07 4.85
30 31 1.598130 GACAAGCTGTTGGACGCCT 60.598 57.895 0.00 0.00 38.07 5.52
31 32 0.320421 TAGACAAGCTGTTGGACGCC 60.320 55.000 0.00 0.00 38.07 5.68
32 33 1.726853 ATAGACAAGCTGTTGGACGC 58.273 50.000 0.00 0.00 38.07 5.19
33 34 3.804325 CCATATAGACAAGCTGTTGGACG 59.196 47.826 0.00 0.00 38.07 4.79
34 35 4.770795 ACCATATAGACAAGCTGTTGGAC 58.229 43.478 9.51 0.00 38.07 4.02
35 36 4.441495 CGACCATATAGACAAGCTGTTGGA 60.441 45.833 9.51 0.00 38.07 3.53
36 37 3.804325 CGACCATATAGACAAGCTGTTGG 59.196 47.826 0.00 0.00 38.07 3.77
37 38 4.433615 ACGACCATATAGACAAGCTGTTG 58.566 43.478 0.00 0.00 39.82 3.33
38 39 4.441634 GGACGACCATATAGACAAGCTGTT 60.442 45.833 0.00 0.00 35.97 3.16
39 40 3.068307 GGACGACCATATAGACAAGCTGT 59.932 47.826 0.00 0.00 35.97 4.40
40 41 3.068165 TGGACGACCATATAGACAAGCTG 59.932 47.826 1.37 0.00 41.77 4.24
41 42 3.296854 TGGACGACCATATAGACAAGCT 58.703 45.455 1.37 0.00 41.77 3.74
42 43 3.728076 TGGACGACCATATAGACAAGC 57.272 47.619 1.37 0.00 41.77 4.01
43 44 9.355215 GTATATTTGGACGACCATATAGACAAG 57.645 37.037 24.99 0.00 44.16 3.16
46 47 8.301720 TGTGTATATTTGGACGACCATATAGAC 58.698 37.037 23.98 23.98 44.55 2.59
47 48 8.411991 TGTGTATATTTGGACGACCATATAGA 57.588 34.615 18.22 13.12 46.34 1.98
48 49 9.302345 GATGTGTATATTTGGACGACCATATAG 57.698 37.037 18.22 0.00 46.34 1.31
49 50 8.255206 GGATGTGTATATTTGGACGACCATATA 58.745 37.037 16.40 16.40 46.34 0.86
50 51 7.038302 AGGATGTGTATATTTGGACGACCATAT 60.038 37.037 7.61 11.10 46.34 1.78
51 52 6.269077 AGGATGTGTATATTTGGACGACCATA 59.731 38.462 7.61 3.12 46.34 2.74
52 53 5.071788 AGGATGTGTATATTTGGACGACCAT 59.928 40.000 7.61 0.00 46.34 3.55
53 54 4.407621 AGGATGTGTATATTTGGACGACCA 59.592 41.667 1.37 1.37 45.34 4.02
54 55 4.957296 AGGATGTGTATATTTGGACGACC 58.043 43.478 0.00 0.00 0.00 4.79
55 56 5.844004 AGAGGATGTGTATATTTGGACGAC 58.156 41.667 0.00 0.00 0.00 4.34
56 57 7.591421 TTAGAGGATGTGTATATTTGGACGA 57.409 36.000 0.00 0.00 0.00 4.20
57 58 8.833231 ATTTAGAGGATGTGTATATTTGGACG 57.167 34.615 0.00 0.00 0.00 4.79
58 59 8.926710 CGATTTAGAGGATGTGTATATTTGGAC 58.073 37.037 0.00 0.00 0.00 4.02
59 60 8.866093 TCGATTTAGAGGATGTGTATATTTGGA 58.134 33.333 0.00 0.00 0.00 3.53
60 61 8.926710 GTCGATTTAGAGGATGTGTATATTTGG 58.073 37.037 0.00 0.00 0.00 3.28
61 62 8.926710 GGTCGATTTAGAGGATGTGTATATTTG 58.073 37.037 0.00 0.00 0.00 2.32
62 63 8.871125 AGGTCGATTTAGAGGATGTGTATATTT 58.129 33.333 0.00 0.00 0.00 1.40
63 64 8.423906 AGGTCGATTTAGAGGATGTGTATATT 57.576 34.615 0.00 0.00 0.00 1.28
64 65 7.148222 CGAGGTCGATTTAGAGGATGTGTATAT 60.148 40.741 0.00 0.00 43.02 0.86
65 66 6.148976 CGAGGTCGATTTAGAGGATGTGTATA 59.851 42.308 0.00 0.00 43.02 1.47
66 67 5.048643 CGAGGTCGATTTAGAGGATGTGTAT 60.049 44.000 0.00 0.00 43.02 2.29
67 68 4.275196 CGAGGTCGATTTAGAGGATGTGTA 59.725 45.833 0.00 0.00 43.02 2.90
68 69 3.066900 CGAGGTCGATTTAGAGGATGTGT 59.933 47.826 0.00 0.00 43.02 3.72
69 70 3.315470 TCGAGGTCGATTTAGAGGATGTG 59.685 47.826 0.00 0.00 44.22 3.21
70 71 3.552875 TCGAGGTCGATTTAGAGGATGT 58.447 45.455 0.00 0.00 44.22 3.06
83 84 1.071019 CGTGGACATTGTCGAGGTCG 61.071 60.000 10.56 3.71 39.90 4.79
84 85 1.352156 GCGTGGACATTGTCGAGGTC 61.352 60.000 18.51 10.16 38.31 3.85
85 86 1.374252 GCGTGGACATTGTCGAGGT 60.374 57.895 18.51 0.00 32.65 3.85
86 87 2.100631 GGCGTGGACATTGTCGAGG 61.101 63.158 14.72 14.72 32.65 4.63
87 88 1.079819 AGGCGTGGACATTGTCGAG 60.080 57.895 10.56 5.72 32.65 4.04
88 89 1.374125 CAGGCGTGGACATTGTCGA 60.374 57.895 10.56 3.99 32.65 4.20
89 90 2.779951 TCCAGGCGTGGACATTGTCG 62.780 60.000 23.92 1.59 46.77 4.35
90 91 1.003839 TCCAGGCGTGGACATTGTC 60.004 57.895 23.92 8.34 46.77 3.18
91 92 3.156714 TCCAGGCGTGGACATTGT 58.843 55.556 23.92 0.00 46.77 2.71
98 99 0.888736 TTCACATTGTCCAGGCGTGG 60.889 55.000 19.57 19.57 46.63 4.94
99 100 0.518636 CTTCACATTGTCCAGGCGTG 59.481 55.000 0.00 0.00 0.00 5.34
100 101 0.606401 CCTTCACATTGTCCAGGCGT 60.606 55.000 0.00 0.00 0.00 5.68
101 102 1.926511 GCCTTCACATTGTCCAGGCG 61.927 60.000 16.47 0.00 40.74 5.52
102 103 1.885871 GCCTTCACATTGTCCAGGC 59.114 57.895 16.47 16.47 43.26 4.85
103 104 0.606401 ACGCCTTCACATTGTCCAGG 60.606 55.000 6.46 6.46 0.00 4.45
104 105 0.798776 GACGCCTTCACATTGTCCAG 59.201 55.000 0.00 0.00 0.00 3.86
105 106 0.948623 CGACGCCTTCACATTGTCCA 60.949 55.000 0.00 0.00 0.00 4.02
106 107 0.949105 ACGACGCCTTCACATTGTCC 60.949 55.000 0.00 0.00 0.00 4.02
107 108 0.438830 GACGACGCCTTCACATTGTC 59.561 55.000 0.00 0.00 0.00 3.18
108 109 0.033504 AGACGACGCCTTCACATTGT 59.966 50.000 0.00 0.00 0.00 2.71
109 110 1.990799 TAGACGACGCCTTCACATTG 58.009 50.000 0.00 0.00 0.00 2.82
110 111 2.735134 GTTTAGACGACGCCTTCACATT 59.265 45.455 0.00 0.00 0.00 2.71
111 112 2.029290 AGTTTAGACGACGCCTTCACAT 60.029 45.455 0.00 0.00 0.00 3.21
112 113 1.338973 AGTTTAGACGACGCCTTCACA 59.661 47.619 0.00 0.00 0.00 3.58
113 114 1.984297 GAGTTTAGACGACGCCTTCAC 59.016 52.381 0.00 0.00 0.00 3.18
114 115 1.610038 TGAGTTTAGACGACGCCTTCA 59.390 47.619 0.00 0.00 0.00 3.02
115 116 2.251893 CTGAGTTTAGACGACGCCTTC 58.748 52.381 0.00 0.00 0.00 3.46
116 117 1.669211 GCTGAGTTTAGACGACGCCTT 60.669 52.381 0.00 0.00 0.00 4.35
117 118 0.109226 GCTGAGTTTAGACGACGCCT 60.109 55.000 0.00 0.00 0.00 5.52
118 119 0.109226 AGCTGAGTTTAGACGACGCC 60.109 55.000 0.00 0.00 0.00 5.68
119 120 0.985549 CAGCTGAGTTTAGACGACGC 59.014 55.000 8.42 0.00 0.00 5.19
120 121 0.985549 GCAGCTGAGTTTAGACGACG 59.014 55.000 20.43 0.00 0.00 5.12
121 122 1.989165 CTGCAGCTGAGTTTAGACGAC 59.011 52.381 20.43 0.00 0.00 4.34
122 123 1.613925 ACTGCAGCTGAGTTTAGACGA 59.386 47.619 20.43 0.00 0.00 4.20
123 124 1.989165 GACTGCAGCTGAGTTTAGACG 59.011 52.381 20.43 0.00 0.00 4.18
124 125 3.032017 TGACTGCAGCTGAGTTTAGAC 57.968 47.619 20.43 7.73 0.00 2.59
125 126 3.259123 TCATGACTGCAGCTGAGTTTAGA 59.741 43.478 20.43 12.81 0.00 2.10
126 127 3.593096 TCATGACTGCAGCTGAGTTTAG 58.407 45.455 20.43 9.17 0.00 1.85
127 128 3.683365 TCATGACTGCAGCTGAGTTTA 57.317 42.857 20.43 11.26 0.00 2.01
128 129 2.556144 TCATGACTGCAGCTGAGTTT 57.444 45.000 20.43 7.28 0.00 2.66
129 130 2.783609 ATCATGACTGCAGCTGAGTT 57.216 45.000 20.43 0.00 0.00 3.01
130 131 2.783609 AATCATGACTGCAGCTGAGT 57.216 45.000 20.43 17.56 0.00 3.41
131 132 3.271729 AGAAATCATGACTGCAGCTGAG 58.728 45.455 20.43 14.33 0.00 3.35
132 133 3.345508 AGAAATCATGACTGCAGCTGA 57.654 42.857 20.43 14.72 0.00 4.26
133 134 3.181499 GGAAGAAATCATGACTGCAGCTG 60.181 47.826 15.27 10.11 0.00 4.24
134 135 3.015327 GGAAGAAATCATGACTGCAGCT 58.985 45.455 15.27 0.23 0.00 4.24
135 136 3.015327 AGGAAGAAATCATGACTGCAGC 58.985 45.455 15.27 7.45 0.00 5.25
136 137 4.515361 AGAGGAAGAAATCATGACTGCAG 58.485 43.478 13.48 13.48 0.00 4.41
137 138 4.511527 GAGAGGAAGAAATCATGACTGCA 58.488 43.478 0.00 0.00 0.00 4.41
138 139 3.876320 GGAGAGGAAGAAATCATGACTGC 59.124 47.826 0.00 0.00 0.00 4.40
139 140 4.450053 GGGAGAGGAAGAAATCATGACTG 58.550 47.826 0.00 0.00 0.00 3.51
140 141 3.457749 GGGGAGAGGAAGAAATCATGACT 59.542 47.826 0.00 0.00 0.00 3.41
141 142 3.200825 TGGGGAGAGGAAGAAATCATGAC 59.799 47.826 0.00 0.00 0.00 3.06
142 143 3.457380 CTGGGGAGAGGAAGAAATCATGA 59.543 47.826 0.00 0.00 0.00 3.07
143 144 3.818180 CTGGGGAGAGGAAGAAATCATG 58.182 50.000 0.00 0.00 0.00 3.07
144 145 2.174424 GCTGGGGAGAGGAAGAAATCAT 59.826 50.000 0.00 0.00 0.00 2.45
145 146 1.561542 GCTGGGGAGAGGAAGAAATCA 59.438 52.381 0.00 0.00 0.00 2.57
146 147 1.474143 CGCTGGGGAGAGGAAGAAATC 60.474 57.143 0.00 0.00 0.00 2.17
147 148 0.543749 CGCTGGGGAGAGGAAGAAAT 59.456 55.000 0.00 0.00 0.00 2.17
148 149 0.544357 TCGCTGGGGAGAGGAAGAAA 60.544 55.000 0.00 0.00 0.00 2.52
149 150 1.078528 TCGCTGGGGAGAGGAAGAA 59.921 57.895 0.00 0.00 0.00 2.52
150 151 1.682684 GTCGCTGGGGAGAGGAAGA 60.683 63.158 0.00 0.00 0.00 2.87
151 152 2.896443 GTCGCTGGGGAGAGGAAG 59.104 66.667 0.00 0.00 0.00 3.46
152 153 3.068691 CGTCGCTGGGGAGAGGAA 61.069 66.667 0.00 0.00 30.73 3.36
165 166 4.082523 ATGACAGGTGGGCCGTCG 62.083 66.667 0.00 0.00 39.45 5.12
166 167 2.436646 CATGACAGGTGGGCCGTC 60.437 66.667 0.00 0.00 40.50 4.79
167 168 4.033776 CCATGACAGGTGGGCCGT 62.034 66.667 0.00 0.00 40.50 5.68
168 169 3.976701 GACCATGACAGGTGGGCCG 62.977 68.421 0.00 0.00 43.38 6.13
169 170 2.044946 GACCATGACAGGTGGGCC 60.045 66.667 0.00 0.00 43.38 5.80
170 171 2.044946 GGACCATGACAGGTGGGC 60.045 66.667 0.00 0.00 43.38 5.36
171 172 1.925455 AGGGACCATGACAGGTGGG 60.925 63.158 0.00 0.00 43.38 4.61
172 173 1.300963 CAGGGACCATGACAGGTGG 59.699 63.158 0.00 0.00 43.38 4.61
173 174 1.275666 TACAGGGACCATGACAGGTG 58.724 55.000 14.23 0.00 43.38 4.00
174 175 2.270434 ATACAGGGACCATGACAGGT 57.730 50.000 14.23 0.00 46.82 4.00
175 176 5.186021 GTCTATATACAGGGACCATGACAGG 59.814 48.000 14.23 0.00 0.00 4.00
176 177 5.106118 CGTCTATATACAGGGACCATGACAG 60.106 48.000 14.23 2.45 0.00 3.51
177 178 4.765339 CGTCTATATACAGGGACCATGACA 59.235 45.833 14.23 0.03 0.00 3.58
178 179 4.765856 ACGTCTATATACAGGGACCATGAC 59.234 45.833 14.23 0.00 0.00 3.06
179 180 4.994282 ACGTCTATATACAGGGACCATGA 58.006 43.478 14.23 0.00 0.00 3.07
180 181 5.477291 AGAACGTCTATATACAGGGACCATG 59.523 44.000 4.17 4.17 0.00 3.66
181 182 5.477291 CAGAACGTCTATATACAGGGACCAT 59.523 44.000 0.00 0.00 0.00 3.55
182 183 4.825634 CAGAACGTCTATATACAGGGACCA 59.174 45.833 0.00 0.00 0.00 4.02
183 184 5.068636 TCAGAACGTCTATATACAGGGACC 58.931 45.833 0.00 0.00 0.00 4.46
184 185 6.613233 CATCAGAACGTCTATATACAGGGAC 58.387 44.000 0.00 0.00 0.00 4.46
185 186 5.183331 GCATCAGAACGTCTATATACAGGGA 59.817 44.000 0.00 0.00 0.00 4.20
186 187 5.048013 TGCATCAGAACGTCTATATACAGGG 60.048 44.000 0.00 0.00 0.00 4.45
187 188 6.013842 TGCATCAGAACGTCTATATACAGG 57.986 41.667 0.00 0.00 0.00 4.00
188 189 7.363431 TCTTGCATCAGAACGTCTATATACAG 58.637 38.462 0.00 0.00 0.00 2.74
189 190 7.272037 TCTTGCATCAGAACGTCTATATACA 57.728 36.000 0.00 0.00 0.00 2.29
190 191 8.642885 CAATCTTGCATCAGAACGTCTATATAC 58.357 37.037 0.00 0.00 0.00 1.47
191 192 7.814587 CCAATCTTGCATCAGAACGTCTATATA 59.185 37.037 0.00 0.00 0.00 0.86
192 193 6.648310 CCAATCTTGCATCAGAACGTCTATAT 59.352 38.462 0.00 0.00 0.00 0.86
193 194 5.985530 CCAATCTTGCATCAGAACGTCTATA 59.014 40.000 0.00 0.00 0.00 1.31
194 195 4.813161 CCAATCTTGCATCAGAACGTCTAT 59.187 41.667 0.00 0.00 0.00 1.98
195 196 4.081697 TCCAATCTTGCATCAGAACGTCTA 60.082 41.667 0.00 0.00 0.00 2.59
196 197 3.005554 CCAATCTTGCATCAGAACGTCT 58.994 45.455 0.00 0.00 0.00 4.18
197 198 3.002791 TCCAATCTTGCATCAGAACGTC 58.997 45.455 0.00 0.00 0.00 4.34
198 199 2.744202 GTCCAATCTTGCATCAGAACGT 59.256 45.455 0.00 0.00 0.00 3.99
199 200 2.222886 CGTCCAATCTTGCATCAGAACG 60.223 50.000 0.00 0.00 0.00 3.95
200 201 2.744202 ACGTCCAATCTTGCATCAGAAC 59.256 45.455 0.00 0.00 0.00 3.01
201 202 2.743664 CACGTCCAATCTTGCATCAGAA 59.256 45.455 0.00 0.00 0.00 3.02
202 203 2.289631 ACACGTCCAATCTTGCATCAGA 60.290 45.455 0.00 0.00 0.00 3.27
203 204 2.079158 ACACGTCCAATCTTGCATCAG 58.921 47.619 0.00 0.00 0.00 2.90
204 205 2.183478 ACACGTCCAATCTTGCATCA 57.817 45.000 0.00 0.00 0.00 3.07
205 206 5.696270 TCATATACACGTCCAATCTTGCATC 59.304 40.000 0.00 0.00 0.00 3.91
206 207 5.610398 TCATATACACGTCCAATCTTGCAT 58.390 37.500 0.00 0.00 0.00 3.96
207 208 5.017294 TCATATACACGTCCAATCTTGCA 57.983 39.130 0.00 0.00 0.00 4.08
208 209 5.050091 CCTTCATATACACGTCCAATCTTGC 60.050 44.000 0.00 0.00 0.00 4.01
209 210 6.280643 TCCTTCATATACACGTCCAATCTTG 58.719 40.000 0.00 0.00 0.00 3.02
210 211 6.479972 TCCTTCATATACACGTCCAATCTT 57.520 37.500 0.00 0.00 0.00 2.40
211 212 6.479972 TTCCTTCATATACACGTCCAATCT 57.520 37.500 0.00 0.00 0.00 2.40
212 213 7.155328 AGATTCCTTCATATACACGTCCAATC 58.845 38.462 0.00 0.00 0.00 2.67
213 214 7.067496 AGATTCCTTCATATACACGTCCAAT 57.933 36.000 0.00 0.00 0.00 3.16
214 215 6.479972 AGATTCCTTCATATACACGTCCAA 57.520 37.500 0.00 0.00 0.00 3.53
215 216 6.479972 AAGATTCCTTCATATACACGTCCA 57.520 37.500 0.00 0.00 0.00 4.02
216 217 7.787725 AAAAGATTCCTTCATATACACGTCC 57.212 36.000 0.00 0.00 0.00 4.79
225 226 9.753674 ACAATGGTCTAAAAAGATTCCTTCATA 57.246 29.630 0.00 0.00 0.00 2.15
226 227 8.655935 ACAATGGTCTAAAAAGATTCCTTCAT 57.344 30.769 0.00 0.00 0.00 2.57
227 228 8.110860 GACAATGGTCTAAAAAGATTCCTTCA 57.889 34.615 0.00 0.00 40.99 3.02
276 277 9.578576 AGAACATTTCCAATAGCATGTGTATAT 57.421 29.630 0.00 0.00 30.15 0.86
277 278 8.978874 AGAACATTTCCAATAGCATGTGTATA 57.021 30.769 0.00 0.00 30.15 1.47
278 279 7.886629 AGAACATTTCCAATAGCATGTGTAT 57.113 32.000 0.00 0.00 30.15 2.29
279 280 7.701539 AAGAACATTTCCAATAGCATGTGTA 57.298 32.000 0.00 0.00 30.15 2.90
280 281 6.594788 AAGAACATTTCCAATAGCATGTGT 57.405 33.333 0.00 0.00 30.15 3.72
281 282 6.688385 CGTAAGAACATTTCCAATAGCATGTG 59.312 38.462 0.00 0.00 43.02 3.21
282 283 6.374333 ACGTAAGAACATTTCCAATAGCATGT 59.626 34.615 0.00 0.00 43.62 3.21
283 284 6.785191 ACGTAAGAACATTTCCAATAGCATG 58.215 36.000 0.00 0.00 43.62 4.06
284 285 7.985184 TCTACGTAAGAACATTTCCAATAGCAT 59.015 33.333 0.00 0.00 43.62 3.79
285 286 7.324935 TCTACGTAAGAACATTTCCAATAGCA 58.675 34.615 0.00 0.00 43.62 3.49
286 287 7.042658 CCTCTACGTAAGAACATTTCCAATAGC 60.043 40.741 0.00 0.00 43.62 2.97
287 288 8.195436 TCCTCTACGTAAGAACATTTCCAATAG 58.805 37.037 0.00 0.00 43.62 1.73
288 289 8.070034 TCCTCTACGTAAGAACATTTCCAATA 57.930 34.615 0.00 0.00 43.62 1.90
289 290 6.942976 TCCTCTACGTAAGAACATTTCCAAT 58.057 36.000 0.00 0.00 43.62 3.16
290 291 6.349243 TCCTCTACGTAAGAACATTTCCAA 57.651 37.500 0.00 0.00 43.62 3.53
291 292 5.988310 TCCTCTACGTAAGAACATTTCCA 57.012 39.130 0.00 0.00 43.62 3.53
292 293 6.570692 TCATCCTCTACGTAAGAACATTTCC 58.429 40.000 0.00 0.00 43.62 3.13
293 294 7.974501 TCTTCATCCTCTACGTAAGAACATTTC 59.025 37.037 0.00 0.00 43.62 2.17
294 295 7.837863 TCTTCATCCTCTACGTAAGAACATTT 58.162 34.615 0.00 0.00 43.62 2.32
295 296 7.406031 TCTTCATCCTCTACGTAAGAACATT 57.594 36.000 0.00 0.00 43.62 2.71
300 301 7.393796 AGAGTTTTCTTCATCCTCTACGTAAGA 59.606 37.037 0.00 0.00 43.62 2.10
328 329 2.100916 CACCGCACAAGTAGGTATAGCT 59.899 50.000 9.78 9.78 36.34 3.32
335 336 1.796151 CATGCACCGCACAAGTAGG 59.204 57.895 0.00 0.00 43.04 3.18
336 337 1.135315 GCATGCACCGCACAAGTAG 59.865 57.895 14.21 0.00 43.04 2.57
378 382 0.872388 ATGTGTTCGACTTTTCCGCC 59.128 50.000 0.00 0.00 0.00 6.13
381 385 4.510340 AGTGTACATGTGTTCGACTTTTCC 59.490 41.667 9.11 0.00 0.00 3.13
390 394 2.066262 CACCGGAGTGTACATGTGTTC 58.934 52.381 9.46 0.55 39.30 3.18
410 414 1.650912 CGGTCTGCATATGCCAAGC 59.349 57.895 24.54 19.08 41.18 4.01
448 452 1.927174 GATTCGTCCACGTCAATCCAG 59.073 52.381 0.00 0.00 40.80 3.86
449 453 1.273886 TGATTCGTCCACGTCAATCCA 59.726 47.619 9.70 0.00 40.80 3.41
459 463 1.540146 CCGGTATGCATGATTCGTCCA 60.540 52.381 10.16 0.00 0.00 4.02
460 464 1.148310 CCGGTATGCATGATTCGTCC 58.852 55.000 10.16 0.00 0.00 4.79
476 480 2.742372 CTTCAACGACTGGGCCGG 60.742 66.667 11.83 11.83 0.00 6.13
477 481 1.738099 CTCTTCAACGACTGGGCCG 60.738 63.158 0.00 0.00 0.00 6.13
478 482 1.376037 CCTCTTCAACGACTGGGCC 60.376 63.158 0.00 0.00 0.00 5.80
479 483 0.670854 GTCCTCTTCAACGACTGGGC 60.671 60.000 0.00 0.00 0.00 5.36
522 526 2.957402 TCCATCTTTCTGTTGGCACT 57.043 45.000 0.00 0.00 35.90 4.40
523 527 2.821969 ACATCCATCTTTCTGTTGGCAC 59.178 45.455 0.00 0.00 35.90 5.01
524 528 3.159213 ACATCCATCTTTCTGTTGGCA 57.841 42.857 0.00 0.00 35.90 4.92
525 529 4.095483 CACTACATCCATCTTTCTGTTGGC 59.905 45.833 0.00 0.00 35.90 4.52
526 530 5.248640 ACACTACATCCATCTTTCTGTTGG 58.751 41.667 0.00 0.00 36.98 3.77
527 531 6.873605 TGTACACTACATCCATCTTTCTGTTG 59.126 38.462 0.00 0.00 32.89 3.33
528 532 6.874134 GTGTACACTACATCCATCTTTCTGTT 59.126 38.462 18.92 0.00 41.34 3.16
529 533 6.014584 TGTGTACACTACATCCATCTTTCTGT 60.015 38.462 25.60 0.00 41.34 3.41
530 534 6.398095 TGTGTACACTACATCCATCTTTCTG 58.602 40.000 25.60 0.00 41.34 3.02
531 535 6.605471 TGTGTACACTACATCCATCTTTCT 57.395 37.500 25.60 0.00 41.34 2.52
532 536 6.238211 GCATGTGTACACTACATCCATCTTTC 60.238 42.308 25.60 0.00 41.34 2.62
533 537 5.586243 GCATGTGTACACTACATCCATCTTT 59.414 40.000 25.60 0.00 41.34 2.52
534 538 5.104776 AGCATGTGTACACTACATCCATCTT 60.105 40.000 25.60 0.00 41.34 2.40
535 539 4.406972 AGCATGTGTACACTACATCCATCT 59.593 41.667 25.60 7.83 41.34 2.90
536 540 4.697514 AGCATGTGTACACTACATCCATC 58.302 43.478 25.60 5.93 41.34 3.51
537 541 4.760530 AGCATGTGTACACTACATCCAT 57.239 40.909 25.60 7.26 41.34 3.41
538 542 5.869649 ATAGCATGTGTACACTACATCCA 57.130 39.130 25.60 5.06 41.34 3.41
539 543 6.516718 AGAATAGCATGTGTACACTACATCC 58.483 40.000 25.60 2.76 41.34 3.51
540 544 8.353684 AGTAGAATAGCATGTGTACACTACATC 58.646 37.037 25.60 14.21 41.34 3.06
541 545 8.239038 AGTAGAATAGCATGTGTACACTACAT 57.761 34.615 25.60 9.43 41.34 2.29
542 546 7.640597 AGTAGAATAGCATGTGTACACTACA 57.359 36.000 25.60 7.33 36.08 2.74
543 547 8.928270 AAAGTAGAATAGCATGTGTACACTAC 57.072 34.615 25.60 15.65 0.00 2.73
544 548 8.967918 AGAAAGTAGAATAGCATGTGTACACTA 58.032 33.333 25.60 13.17 0.00 2.74
580 606 2.238395 AGATGAGGGAAGAGCCTTTGAC 59.762 50.000 0.00 0.00 36.66 3.18
683 710 4.993584 GCTGAAGTCTGAACATCTTTCTGA 59.006 41.667 0.00 0.00 0.00 3.27
723 750 7.769044 TCAATTTTCTTCCTAGATACGGAAAGG 59.231 37.037 0.00 0.00 39.86 3.11
729 756 7.982354 AGAGGTTCAATTTTCTTCCTAGATACG 59.018 37.037 0.00 0.00 0.00 3.06
754 782 3.944055 TCGAAGAGAAAGAGGTCCAAG 57.056 47.619 0.00 0.00 0.00 3.61
762 790 2.350522 GGCTGCAATCGAAGAGAAAGA 58.649 47.619 0.50 0.00 43.63 2.52
780 809 3.508012 AGAGATACATCACCATCTACGGC 59.492 47.826 0.00 0.00 31.63 5.68
824 853 9.399797 AGGTAAGGTAAATCCGTAAAATTTAGG 57.600 33.333 0.00 0.00 41.99 2.69
835 864 5.507650 GCTACTCAGAGGTAAGGTAAATCCG 60.508 48.000 1.53 0.00 41.99 4.18
843 872 1.103803 TGCGCTACTCAGAGGTAAGG 58.896 55.000 9.73 0.00 0.00 2.69
846 875 0.945099 CGATGCGCTACTCAGAGGTA 59.055 55.000 9.73 0.00 0.00 3.08
849 878 1.724336 CGATCGATGCGCTACTCAGAG 60.724 57.143 10.26 0.00 0.00 3.35
851 880 2.705974 CGATCGATGCGCTACTCAG 58.294 57.895 10.26 0.47 0.00 3.35
860 889 2.228382 CATGATTTTCGCGATCGATGC 58.772 47.619 21.57 6.19 45.04 3.91
866 896 0.664761 CTGCCCATGATTTTCGCGAT 59.335 50.000 10.88 0.00 0.00 4.58
917 947 6.769822 TGGTGTGGCTATCTAAGTAGTACTAC 59.230 42.308 23.03 23.03 36.35 2.73
918 948 6.903516 TGGTGTGGCTATCTAAGTAGTACTA 58.096 40.000 2.50 0.00 0.00 1.82
961 999 8.390354 GGCAAGGAAAAAGATTAATGTATTTGC 58.610 33.333 0.00 0.81 35.29 3.68
962 1000 9.434420 TGGCAAGGAAAAAGATTAATGTATTTG 57.566 29.630 0.00 0.00 0.00 2.32
968 1006 5.809051 GCTCTGGCAAGGAAAAAGATTAATG 59.191 40.000 0.00 0.00 38.54 1.90
969 1007 5.718607 AGCTCTGGCAAGGAAAAAGATTAAT 59.281 36.000 0.00 0.00 41.70 1.40
976 1014 1.202758 TCGAGCTCTGGCAAGGAAAAA 60.203 47.619 12.85 0.00 41.70 1.94
1024 1069 0.757188 ATGGCAGGACGTAGGAGGAG 60.757 60.000 0.00 0.00 0.00 3.69
1034 1079 1.977293 GAGGAGTGGGATGGCAGGAC 61.977 65.000 0.00 0.00 0.00 3.85
1035 1080 1.690633 GAGGAGTGGGATGGCAGGA 60.691 63.158 0.00 0.00 0.00 3.86
1036 1081 2.914289 GAGGAGTGGGATGGCAGG 59.086 66.667 0.00 0.00 0.00 4.85
1037 1082 1.903877 AACGAGGAGTGGGATGGCAG 61.904 60.000 0.00 0.00 0.00 4.85
1059 1104 0.899717 TGGATGCAACAAGGGGAAGC 60.900 55.000 0.00 0.00 0.00 3.86
1070 1115 0.388659 GTTGCTGGTTGTGGATGCAA 59.611 50.000 0.00 0.00 40.65 4.08
1090 1138 6.094048 CCATGGTATAGGAAACTGAAACTGTG 59.906 42.308 2.57 0.00 43.88 3.66
1111 1159 1.808945 GTTGACACCAGAGAAGCCATG 59.191 52.381 0.00 0.00 0.00 3.66
1179 1227 0.756294 TGATGGTGTCGTTGGTGAGT 59.244 50.000 0.00 0.00 0.00 3.41
1347 1395 2.036733 CGTGTTGGAGAGGTTCTTGGTA 59.963 50.000 0.00 0.00 0.00 3.25
1437 1485 1.691195 TTTGGGTGGTGTCGAGCTCA 61.691 55.000 15.40 0.00 0.00 4.26
1455 1503 1.420430 TGTCCTGGAACTCCTCGTTT 58.580 50.000 0.00 0.00 35.56 3.60
1764 1812 0.457853 GAACGCAGTGGATCGTGCTA 60.458 55.000 10.52 0.00 45.00 3.49
2043 2091 2.265589 TTTCCTTGAACCCTTCCGTC 57.734 50.000 0.00 0.00 0.00 4.79
2109 2157 2.656947 TCAGTTTGGACTTTGGGAGG 57.343 50.000 0.00 0.00 32.54 4.30
2131 2179 0.824759 GACACCCTCTTCACCGCTAT 59.175 55.000 0.00 0.00 0.00 2.97
2175 2223 1.066143 ACAACCTCCGCGATGAATTCT 60.066 47.619 8.23 0.00 0.00 2.40
2178 2226 0.249120 TGACAACCTCCGCGATGAAT 59.751 50.000 8.23 0.00 0.00 2.57
2250 2298 4.645136 ACCAAAAGAAGTTCACCTTTCCTC 59.355 41.667 5.50 0.00 32.01 3.71
2481 2529 2.551071 CCTTGAGAGACCAAAGTCACCC 60.551 54.545 0.00 0.00 46.15 4.61
2586 2634 1.137086 TCTGTAAGAGCGGATGCCTTC 59.863 52.381 0.00 0.00 38.67 3.46
2604 2652 1.574428 GCCGAATGCAAACACGTCT 59.426 52.632 0.00 0.00 40.77 4.18
2634 2682 0.178921 TCTGCCCAGAAGTGACCTCT 60.179 55.000 0.00 0.00 33.91 3.69
2685 2733 1.577328 CCCAGTCGACCAATGTGTGC 61.577 60.000 13.01 0.00 0.00 4.57
2771 2819 2.159338 ACCAAAGATGCATCATCAACGC 60.159 45.455 27.81 0.00 42.72 4.84
2773 2821 5.355071 TCAGTACCAAAGATGCATCATCAAC 59.645 40.000 27.81 16.59 42.72 3.18
2889 2937 0.035458 AGTGTGCTGGTGTTAGCTCC 59.965 55.000 0.00 0.00 44.01 4.70
2952 3000 4.458989 TGAGGATATTGCAAGTTTGGTGAC 59.541 41.667 4.94 0.00 0.00 3.67
3041 3089 9.737427 CATCTAAGAGACACGATAACACTAAAT 57.263 33.333 0.00 0.00 0.00 1.40
3100 3150 7.033185 ACGAAATGCACAAGAAAGTACTTTTT 58.967 30.769 21.40 13.65 32.11 1.94
3101 3151 6.560711 ACGAAATGCACAAGAAAGTACTTTT 58.439 32.000 21.40 9.30 32.11 2.27
3102 3152 6.038271 AGACGAAATGCACAAGAAAGTACTTT 59.962 34.615 20.67 20.67 35.14 2.66
3103 3153 5.527582 AGACGAAATGCACAAGAAAGTACTT 59.472 36.000 1.12 1.12 0.00 2.24
3104 3154 5.050091 CAGACGAAATGCACAAGAAAGTACT 60.050 40.000 0.00 0.00 0.00 2.73
3105 3155 5.140177 CAGACGAAATGCACAAGAAAGTAC 58.860 41.667 0.00 0.00 0.00 2.73
3106 3156 4.213270 CCAGACGAAATGCACAAGAAAGTA 59.787 41.667 0.00 0.00 0.00 2.24
3107 3157 3.003689 CCAGACGAAATGCACAAGAAAGT 59.996 43.478 0.00 0.00 0.00 2.66
3108 3158 3.250762 TCCAGACGAAATGCACAAGAAAG 59.749 43.478 0.00 0.00 0.00 2.62
3109 3159 3.210227 TCCAGACGAAATGCACAAGAAA 58.790 40.909 0.00 0.00 0.00 2.52
3110 3160 2.844946 TCCAGACGAAATGCACAAGAA 58.155 42.857 0.00 0.00 0.00 2.52
3154 3208 9.878737 TTTAATATACTCCCTAGCTAGTGTTCT 57.121 33.333 19.31 8.63 0.00 3.01
3213 3269 6.757010 CCGTGAGTAATTAAGCTGAACATAGT 59.243 38.462 0.00 0.00 0.00 2.12
3258 3314 3.176708 CTGGAACCGTGTAGAACATACG 58.823 50.000 0.00 0.00 41.05 3.06
3354 3410 2.036387 CCGTATGTGGTCCATAGTGGA 58.964 52.381 0.00 0.00 45.98 4.02
3355 3411 2.035961 CTCCGTATGTGGTCCATAGTGG 59.964 54.545 0.00 0.00 36.71 4.00
3356 3412 2.693591 ACTCCGTATGTGGTCCATAGTG 59.306 50.000 0.00 0.00 36.71 2.74
3357 3413 3.028094 ACTCCGTATGTGGTCCATAGT 57.972 47.619 0.00 0.00 36.71 2.12
3358 3414 5.524971 TTTACTCCGTATGTGGTCCATAG 57.475 43.478 0.00 0.00 36.71 2.23
3359 3415 5.936187 TTTTACTCCGTATGTGGTCCATA 57.064 39.130 0.00 0.00 34.86 2.74
3360 3416 4.829872 TTTTACTCCGTATGTGGTCCAT 57.170 40.909 0.00 0.00 37.58 3.41
3361 3417 4.829872 ATTTTACTCCGTATGTGGTCCA 57.170 40.909 0.00 0.00 0.00 4.02
3362 3418 6.257193 CACTTATTTTACTCCGTATGTGGTCC 59.743 42.308 0.00 0.00 0.00 4.46
3363 3419 7.037438 TCACTTATTTTACTCCGTATGTGGTC 58.963 38.462 0.00 0.00 0.00 4.02
3364 3420 6.938507 TCACTTATTTTACTCCGTATGTGGT 58.061 36.000 0.00 0.00 0.00 4.16
3365 3421 7.837202 TTCACTTATTTTACTCCGTATGTGG 57.163 36.000 0.00 0.00 0.00 4.17
3366 3422 9.314321 AGATTCACTTATTTTACTCCGTATGTG 57.686 33.333 0.00 0.00 0.00 3.21
3370 3426 9.793252 GTGTAGATTCACTTATTTTACTCCGTA 57.207 33.333 0.00 0.00 35.68 4.02
3371 3427 8.529476 AGTGTAGATTCACTTATTTTACTCCGT 58.471 33.333 0.00 0.00 44.92 4.69
3372 3428 8.928270 AGTGTAGATTCACTTATTTTACTCCG 57.072 34.615 0.00 0.00 44.92 4.63
3380 3436 8.887717 GCATTTCAGAGTGTAGATTCACTTATT 58.112 33.333 0.98 0.00 46.81 1.40
3381 3437 8.043113 TGCATTTCAGAGTGTAGATTCACTTAT 58.957 33.333 0.98 0.00 46.81 1.73
3382 3438 7.386059 TGCATTTCAGAGTGTAGATTCACTTA 58.614 34.615 0.98 0.00 46.81 2.24
3383 3439 6.233434 TGCATTTCAGAGTGTAGATTCACTT 58.767 36.000 0.98 0.00 46.81 3.16
3385 3441 6.538021 AGATGCATTTCAGAGTGTAGATTCAC 59.462 38.462 0.00 0.00 38.46 3.18
3386 3442 6.647229 AGATGCATTTCAGAGTGTAGATTCA 58.353 36.000 0.00 0.00 0.00 2.57
3387 3443 8.830201 ATAGATGCATTTCAGAGTGTAGATTC 57.170 34.615 0.00 0.00 0.00 2.52
3393 3449 9.650539 GATGTATATAGATGCATTTCAGAGTGT 57.349 33.333 0.00 0.00 38.38 3.55
3394 3450 9.096160 GGATGTATATAGATGCATTTCAGAGTG 57.904 37.037 0.00 0.00 38.38 3.51
3395 3451 7.978414 CGGATGTATATAGATGCATTTCAGAGT 59.022 37.037 11.19 0.00 38.38 3.24
3396 3452 7.978414 ACGGATGTATATAGATGCATTTCAGAG 59.022 37.037 11.19 0.00 38.38 3.35
3397 3453 7.840931 ACGGATGTATATAGATGCATTTCAGA 58.159 34.615 11.19 0.00 38.38 3.27
3398 3454 9.755804 ATACGGATGTATATAGATGCATTTCAG 57.244 33.333 11.19 0.00 38.38 3.02
3399 3455 9.533253 CATACGGATGTATATAGATGCATTTCA 57.467 33.333 11.19 0.00 38.38 2.69
3400 3456 9.534565 ACATACGGATGTATATAGATGCATTTC 57.465 33.333 12.79 0.00 44.77 2.17
3401 3457 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
3402 3458 8.695456 TCACATACGGATGTATATAGATGCATT 58.305 33.333 14.23 1.23 44.82 3.56
3403 3459 8.237811 TCACATACGGATGTATATAGATGCAT 57.762 34.615 14.23 0.00 44.82 3.96
3404 3460 7.639113 TCACATACGGATGTATATAGATGCA 57.361 36.000 14.23 0.00 44.82 3.96
3405 3461 7.810282 GGATCACATACGGATGTATATAGATGC 59.190 40.741 14.23 12.78 44.82 3.91
3406 3462 8.850156 TGGATCACATACGGATGTATATAGATG 58.150 37.037 14.23 0.00 44.82 2.90
3407 3463 8.996651 TGGATCACATACGGATGTATATAGAT 57.003 34.615 14.23 11.51 44.82 1.98
3408 3464 8.996651 ATGGATCACATACGGATGTATATAGA 57.003 34.615 14.23 6.57 44.82 1.98
3410 3466 9.862149 ACTATGGATCACATACGGATGTATATA 57.138 33.333 14.23 7.10 44.82 0.86
3411 3467 8.633561 CACTATGGATCACATACGGATGTATAT 58.366 37.037 14.23 10.20 44.82 0.86
3412 3468 7.832187 TCACTATGGATCACATACGGATGTATA 59.168 37.037 14.23 6.48 44.82 1.47
3413 3469 6.663523 TCACTATGGATCACATACGGATGTAT 59.336 38.462 14.23 5.54 44.82 2.29
3414 3470 6.007703 TCACTATGGATCACATACGGATGTA 58.992 40.000 14.23 2.61 44.82 2.29
3416 3472 5.391312 TCACTATGGATCACATACGGATG 57.609 43.478 5.94 5.94 41.03 3.51
3417 3473 6.419484 TTTCACTATGGATCACATACGGAT 57.581 37.500 0.00 0.00 41.03 4.18
3418 3474 5.862678 TTTCACTATGGATCACATACGGA 57.137 39.130 0.00 0.00 41.03 4.69
3419 3475 6.459066 AGATTTCACTATGGATCACATACGG 58.541 40.000 0.00 0.00 41.03 4.02
3420 3476 7.374272 AGAGATTTCACTATGGATCACATACG 58.626 38.462 0.00 0.00 41.03 3.06
3421 3477 9.632807 GTAGAGATTTCACTATGGATCACATAC 57.367 37.037 0.00 0.00 41.03 2.39
3422 3478 9.367160 TGTAGAGATTTCACTATGGATCACATA 57.633 33.333 0.00 0.00 41.03 2.29
3423 3479 8.255111 TGTAGAGATTTCACTATGGATCACAT 57.745 34.615 0.00 0.00 43.68 3.21
3424 3480 7.660030 TGTAGAGATTTCACTATGGATCACA 57.340 36.000 0.00 0.00 0.00 3.58
3425 3481 8.948631 TTTGTAGAGATTTCACTATGGATCAC 57.051 34.615 0.00 0.00 0.00 3.06
3426 3482 8.981659 TCTTTGTAGAGATTTCACTATGGATCA 58.018 33.333 0.00 0.00 0.00 2.92
3427 3483 9.255304 GTCTTTGTAGAGATTTCACTATGGATC 57.745 37.037 0.00 0.00 0.00 3.36
3428 3484 8.986991 AGTCTTTGTAGAGATTTCACTATGGAT 58.013 33.333 0.00 0.00 0.00 3.41
3429 3485 8.367660 AGTCTTTGTAGAGATTTCACTATGGA 57.632 34.615 0.00 0.00 0.00 3.41
3446 3502 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
3447 3503 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
3448 3504 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
3449 3505 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
3450 3506 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
3451 3507 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
3452 3508 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
3453 3509 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
3454 3510 7.068702 TGTACTCCCTCCGTTCCTAAATATAA 58.931 38.462 0.00 0.00 0.00 0.98
3455 3511 6.613699 TGTACTCCCTCCGTTCCTAAATATA 58.386 40.000 0.00 0.00 0.00 0.86
3456 3512 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
3457 3513 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
3458 3514 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
3459 3515 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
3460 3516 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
3461 3517 2.024655 ACATGTACTCCCTCCGTTCCTA 60.025 50.000 0.00 0.00 0.00 2.94
3462 3518 1.273098 ACATGTACTCCCTCCGTTCCT 60.273 52.381 0.00 0.00 0.00 3.36
3463 3519 1.134788 CACATGTACTCCCTCCGTTCC 60.135 57.143 0.00 0.00 0.00 3.62
3464 3520 1.822990 TCACATGTACTCCCTCCGTTC 59.177 52.381 0.00 0.00 0.00 3.95
3465 3521 1.933021 TCACATGTACTCCCTCCGTT 58.067 50.000 0.00 0.00 0.00 4.44
3466 3522 1.549170 GTTCACATGTACTCCCTCCGT 59.451 52.381 0.00 0.00 0.00 4.69
3467 3523 1.825474 AGTTCACATGTACTCCCTCCG 59.175 52.381 0.00 0.00 0.00 4.63
3468 3524 2.832129 TGAGTTCACATGTACTCCCTCC 59.168 50.000 20.88 2.89 40.39 4.30
3469 3525 4.160439 TCATGAGTTCACATGTACTCCCTC 59.840 45.833 20.88 12.43 45.21 4.30
3470 3526 4.096681 TCATGAGTTCACATGTACTCCCT 58.903 43.478 20.88 9.60 45.21 4.20
3471 3527 4.471904 TCATGAGTTCACATGTACTCCC 57.528 45.455 20.88 4.08 45.21 4.30
3472 3528 6.992063 AATTCATGAGTTCACATGTACTCC 57.008 37.500 20.88 8.16 45.21 3.85
3473 3529 9.760660 GTAAAATTCATGAGTTCACATGTACTC 57.239 33.333 18.15 18.15 45.21 2.59
3474 3530 9.283768 TGTAAAATTCATGAGTTCACATGTACT 57.716 29.630 3.69 0.00 45.21 2.73
3502 3558 5.179182 CCAAACAAGCACAAACAGAAACTTT 59.821 36.000 0.00 0.00 0.00 2.66
3718 3781 4.748102 GGTACACAAGATCGACACTTCAAA 59.252 41.667 4.08 0.00 0.00 2.69
3773 3836 2.159324 GCAGATTTGAAGCAGGCCTTAC 60.159 50.000 0.00 0.00 32.78 2.34
3841 3904 0.246360 CGGTATCCAGCACTGTGTCA 59.754 55.000 9.86 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.