Multiple sequence alignment - TraesCS3D01G103000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G103000 chr3D 100.000 2531 0 0 1 2531 55368932 55371462 0.000000e+00 4674
1 TraesCS3D01G103000 chr3D 90.217 184 15 3 2258 2440 537587463 537587282 1.170000e-58 237
2 TraesCS3D01G103000 chr3D 78.571 322 25 21 1935 2240 55917482 55917775 3.350000e-39 172
3 TraesCS3D01G103000 chr3B 93.402 1940 106 12 23 1940 200854785 200856724 0.000000e+00 2854
4 TraesCS3D01G103000 chr3B 92.990 1940 114 12 23 1940 200829876 200831815 0.000000e+00 2809
5 TraesCS3D01G103000 chr3B 92.473 1953 129 7 1 1937 97753119 97751169 0.000000e+00 2776
6 TraesCS3D01G103000 chr3B 90.557 1938 116 17 27 1937 581033192 581035089 0.000000e+00 2503
7 TraesCS3D01G103000 chr3B 90.091 656 50 5 52 707 79286201 79286841 0.000000e+00 837
8 TraesCS3D01G103000 chr1D 95.689 1763 70 2 176 1937 467434170 467435927 0.000000e+00 2830
9 TraesCS3D01G103000 chr1D 90.386 1945 102 16 34 1939 451193724 451191826 0.000000e+00 2477
10 TraesCS3D01G103000 chr1D 86.486 185 10 4 2257 2440 96104453 96104283 3.320000e-44 189
11 TraesCS3D01G103000 chr7D 92.945 1956 111 11 1 1939 621162089 621164034 0.000000e+00 2822
12 TraesCS3D01G103000 chr7D 92.701 137 8 2 2254 2389 476002396 476002261 1.990000e-46 196
13 TraesCS3D01G103000 chr5B 92.994 1927 116 4 34 1941 503240692 503238766 0.000000e+00 2793
14 TraesCS3D01G103000 chr6B 92.386 1957 128 11 1 1939 341762566 341760613 0.000000e+00 2769
15 TraesCS3D01G103000 chr2A 92.165 1940 132 10 1 1939 706884510 706886430 0.000000e+00 2723
16 TraesCS3D01G103000 chr2A 90.318 692 65 2 48 739 734734567 734733878 0.000000e+00 905
17 TraesCS3D01G103000 chr2D 91.752 1964 113 13 1 1946 646800317 646798385 0.000000e+00 2684
18 TraesCS3D01G103000 chr2D 91.163 1969 114 15 1 1950 646884083 646882156 0.000000e+00 2617
19 TraesCS3D01G103000 chr2D 88.745 231 8 3 1735 1947 629244134 629244364 1.490000e-67 267
20 TraesCS3D01G103000 chr7A 91.757 1929 138 7 27 1938 86218565 86216641 0.000000e+00 2662
21 TraesCS3D01G103000 chr2B 91.070 1926 130 14 31 1939 643124940 643126840 0.000000e+00 2566
22 TraesCS3D01G103000 chr4D 93.882 1422 55 12 538 1941 39369469 39368062 0.000000e+00 2115
23 TraesCS3D01G103000 chr4D 90.811 185 16 1 2259 2443 86756596 86756413 1.940000e-61 246
24 TraesCS3D01G103000 chr3A 89.586 1690 115 22 1 1654 598875616 598873952 0.000000e+00 2089
25 TraesCS3D01G103000 chr3A 89.011 182 19 1 2259 2440 80408126 80407946 9.110000e-55 224
26 TraesCS3D01G103000 chr3A 92.308 78 3 1 2176 2250 65737688 65737611 9.570000e-20 108
27 TraesCS3D01G103000 chr6D 93.048 187 13 0 2254 2440 411419680 411419866 8.920000e-70 274
28 TraesCS3D01G103000 chr6D 90.374 187 16 2 2254 2440 431924019 431923835 6.990000e-61 244
29 TraesCS3D01G103000 chr6D 88.710 186 17 4 2258 2440 67786584 67786400 9.110000e-55 224
30 TraesCS3D01G103000 chr6A 89.130 184 19 1 2258 2440 569589027 569588844 7.040000e-56 228
31 TraesCS3D01G103000 chr6A 92.593 81 5 1 2254 2334 572259538 572259459 5.720000e-22 115


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G103000 chr3D 55368932 55371462 2530 False 4674 4674 100.000 1 2531 1 chr3D.!!$F1 2530
1 TraesCS3D01G103000 chr3B 200854785 200856724 1939 False 2854 2854 93.402 23 1940 1 chr3B.!!$F3 1917
2 TraesCS3D01G103000 chr3B 200829876 200831815 1939 False 2809 2809 92.990 23 1940 1 chr3B.!!$F2 1917
3 TraesCS3D01G103000 chr3B 97751169 97753119 1950 True 2776 2776 92.473 1 1937 1 chr3B.!!$R1 1936
4 TraesCS3D01G103000 chr3B 581033192 581035089 1897 False 2503 2503 90.557 27 1937 1 chr3B.!!$F4 1910
5 TraesCS3D01G103000 chr3B 79286201 79286841 640 False 837 837 90.091 52 707 1 chr3B.!!$F1 655
6 TraesCS3D01G103000 chr1D 467434170 467435927 1757 False 2830 2830 95.689 176 1937 1 chr1D.!!$F1 1761
7 TraesCS3D01G103000 chr1D 451191826 451193724 1898 True 2477 2477 90.386 34 1939 1 chr1D.!!$R2 1905
8 TraesCS3D01G103000 chr7D 621162089 621164034 1945 False 2822 2822 92.945 1 1939 1 chr7D.!!$F1 1938
9 TraesCS3D01G103000 chr5B 503238766 503240692 1926 True 2793 2793 92.994 34 1941 1 chr5B.!!$R1 1907
10 TraesCS3D01G103000 chr6B 341760613 341762566 1953 True 2769 2769 92.386 1 1939 1 chr6B.!!$R1 1938
11 TraesCS3D01G103000 chr2A 706884510 706886430 1920 False 2723 2723 92.165 1 1939 1 chr2A.!!$F1 1938
12 TraesCS3D01G103000 chr2A 734733878 734734567 689 True 905 905 90.318 48 739 1 chr2A.!!$R1 691
13 TraesCS3D01G103000 chr2D 646798385 646800317 1932 True 2684 2684 91.752 1 1946 1 chr2D.!!$R1 1945
14 TraesCS3D01G103000 chr2D 646882156 646884083 1927 True 2617 2617 91.163 1 1950 1 chr2D.!!$R2 1949
15 TraesCS3D01G103000 chr7A 86216641 86218565 1924 True 2662 2662 91.757 27 1938 1 chr7A.!!$R1 1911
16 TraesCS3D01G103000 chr2B 643124940 643126840 1900 False 2566 2566 91.070 31 1939 1 chr2B.!!$F1 1908
17 TraesCS3D01G103000 chr4D 39368062 39369469 1407 True 2115 2115 93.882 538 1941 1 chr4D.!!$R1 1403
18 TraesCS3D01G103000 chr3A 598873952 598875616 1664 True 2089 2089 89.586 1 1654 1 chr3A.!!$R3 1653

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
915 956 0.244994 AGAGTGACAGTCATGCCGTC 59.755 55.0 6.51 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2026 2174 0.028374 CACGTTGACCGGTTGAAACC 59.972 55.0 9.42 1.88 45.76 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 0.917259 CTCTTCGACATGCACGCTAC 59.083 55.000 7.82 0.00 0.00 3.58
70 90 1.425448 GGGGAATGGGGAATAGAGGTG 59.575 57.143 0.00 0.00 0.00 4.00
82 102 5.721960 GGGAATAGAGGTGGATAAGCATAGA 59.278 44.000 0.00 0.00 0.00 1.98
113 133 8.759641 GTTCATACTAGTTCATAGCAGTTCATG 58.240 37.037 0.00 0.00 34.56 3.07
185 216 1.373577 GGATAGGGGGATAGGGGGATT 59.626 57.143 0.00 0.00 0.00 3.01
310 341 3.478394 CGGGTCGTCGTCGTCGTA 61.478 66.667 11.41 0.00 38.33 3.43
344 375 1.664321 GGTCGATCTGCCAGGTACGT 61.664 60.000 0.00 0.00 0.00 3.57
480 511 1.447643 CGGTCATTAGGAGCCCAGG 59.552 63.158 0.00 0.00 40.99 4.45
529 560 2.163010 TCTTTTTAGCGTCGTCGGAGAT 59.837 45.455 3.90 0.00 40.67 2.75
593 624 0.830648 CCTTCGCTGGGTCAGGAATA 59.169 55.000 6.82 0.00 31.21 1.75
602 633 2.304761 TGGGTCAGGAATAAGCGTCTTT 59.695 45.455 0.00 0.00 0.00 2.52
635 666 2.758089 GGCCTTCATGAGCACTGCG 61.758 63.158 8.97 0.00 0.00 5.18
684 715 2.027625 CCGAAGTTCGAGCACACCC 61.028 63.158 26.37 0.00 43.74 4.61
708 739 1.208535 TGGTGTTCTCGAACTTGGTGT 59.791 47.619 10.75 0.00 41.67 4.16
915 956 0.244994 AGAGTGACAGTCATGCCGTC 59.755 55.000 6.51 0.00 0.00 4.79
1067 1151 3.185299 TTCACCCAATGCCCGACGT 62.185 57.895 0.00 0.00 0.00 4.34
1140 1224 2.721167 CGACGAGGGCATGGAGGAA 61.721 63.158 0.00 0.00 0.00 3.36
1227 1338 0.400213 AGGTCATCCTTGCACCGAAA 59.600 50.000 0.00 0.00 42.12 3.46
1273 1384 1.134521 ACTTCACCAAGCACTTCGTCA 60.135 47.619 0.00 0.00 32.09 4.35
1549 1660 4.035102 GCCGGGCCACCTCTTTCT 62.035 66.667 8.12 0.00 33.28 2.52
1672 1794 7.201478 GCTCTGTTTATACTCTGTTGTGCTTAG 60.201 40.741 0.00 0.00 0.00 2.18
1942 2090 1.265905 CAACCAAACACGCCCTAAGTC 59.734 52.381 0.00 0.00 0.00 3.01
1946 2094 2.218603 CAAACACGCCCTAAGTCAGTT 58.781 47.619 0.00 0.00 0.00 3.16
1947 2095 2.165319 AACACGCCCTAAGTCAGTTC 57.835 50.000 0.00 0.00 0.00 3.01
1948 2096 0.038526 ACACGCCCTAAGTCAGTTCG 60.039 55.000 0.00 0.00 0.00 3.95
1949 2097 0.038526 CACGCCCTAAGTCAGTTCGT 60.039 55.000 0.00 0.00 32.65 3.85
1951 2099 1.336609 ACGCCCTAAGTCAGTTCGTTC 60.337 52.381 0.00 0.00 29.50 3.95
1952 2100 1.347320 GCCCTAAGTCAGTTCGTTCG 58.653 55.000 0.00 0.00 0.00 3.95
1953 2101 1.336609 GCCCTAAGTCAGTTCGTTCGT 60.337 52.381 0.00 0.00 0.00 3.85
1954 2102 2.325761 CCCTAAGTCAGTTCGTTCGTG 58.674 52.381 0.00 0.00 0.00 4.35
1955 2103 1.719780 CCTAAGTCAGTTCGTTCGTGC 59.280 52.381 0.00 0.00 0.00 5.34
1956 2104 1.382419 CTAAGTCAGTTCGTTCGTGCG 59.618 52.381 0.00 0.00 0.00 5.34
1957 2105 1.213094 AAGTCAGTTCGTTCGTGCGG 61.213 55.000 2.16 0.00 0.00 5.69
1958 2106 3.033764 TCAGTTCGTTCGTGCGGC 61.034 61.111 0.00 0.00 0.00 6.53
1959 2107 4.072088 CAGTTCGTTCGTGCGGCC 62.072 66.667 0.00 0.00 0.00 6.13
1969 2117 2.125832 GTGCGGCCGCTACTGTTA 60.126 61.111 45.79 25.39 42.51 2.41
1970 2118 2.165301 GTGCGGCCGCTACTGTTAG 61.165 63.158 45.79 7.18 42.51 2.34
1971 2119 2.585247 GCGGCCGCTACTGTTAGG 60.585 66.667 41.71 1.52 38.26 2.69
1972 2120 3.072486 GCGGCCGCTACTGTTAGGA 62.072 63.158 41.71 0.00 38.26 2.94
1973 2121 1.226888 CGGCCGCTACTGTTAGGAC 60.227 63.158 14.67 0.00 0.00 3.85
1974 2122 1.143401 GGCCGCTACTGTTAGGACC 59.857 63.158 0.00 0.00 0.00 4.46
1975 2123 1.610554 GGCCGCTACTGTTAGGACCA 61.611 60.000 0.00 0.00 0.00 4.02
1976 2124 0.459759 GCCGCTACTGTTAGGACCAC 60.460 60.000 0.00 0.00 0.00 4.16
1977 2125 0.175073 CCGCTACTGTTAGGACCACC 59.825 60.000 0.00 0.00 0.00 4.61
1979 2127 2.372264 CGCTACTGTTAGGACCACCTA 58.628 52.381 0.00 0.00 45.83 3.08
1980 2128 2.957006 CGCTACTGTTAGGACCACCTAT 59.043 50.000 0.00 0.00 46.60 2.57
1981 2129 4.139786 CGCTACTGTTAGGACCACCTATA 58.860 47.826 0.00 0.00 46.60 1.31
1982 2130 4.581824 CGCTACTGTTAGGACCACCTATAA 59.418 45.833 0.00 0.00 46.60 0.98
1983 2131 5.068198 CGCTACTGTTAGGACCACCTATAAA 59.932 44.000 0.00 0.00 46.60 1.40
1984 2132 6.239232 CGCTACTGTTAGGACCACCTATAAAT 60.239 42.308 0.00 0.00 46.60 1.40
1985 2133 7.040201 CGCTACTGTTAGGACCACCTATAAATA 60.040 40.741 0.00 0.00 46.60 1.40
1986 2134 8.087136 GCTACTGTTAGGACCACCTATAAATAC 58.913 40.741 0.00 0.00 46.60 1.89
1987 2135 7.370905 ACTGTTAGGACCACCTATAAATACC 57.629 40.000 0.00 0.00 46.60 2.73
1988 2136 6.328410 ACTGTTAGGACCACCTATAAATACCC 59.672 42.308 0.00 0.00 46.60 3.69
1989 2137 5.608015 TGTTAGGACCACCTATAAATACCCC 59.392 44.000 0.00 0.00 46.60 4.95
1990 2138 4.588387 AGGACCACCTATAAATACCCCT 57.412 45.455 0.00 0.00 45.83 4.79
1991 2139 4.240323 AGGACCACCTATAAATACCCCTG 58.760 47.826 0.00 0.00 45.83 4.45
1992 2140 3.244805 GGACCACCTATAAATACCCCTGC 60.245 52.174 0.00 0.00 0.00 4.85
1993 2141 3.393278 GACCACCTATAAATACCCCTGCA 59.607 47.826 0.00 0.00 0.00 4.41
1994 2142 3.987501 ACCACCTATAAATACCCCTGCAT 59.012 43.478 0.00 0.00 0.00 3.96
1995 2143 4.042934 ACCACCTATAAATACCCCTGCATC 59.957 45.833 0.00 0.00 0.00 3.91
1996 2144 4.289672 CCACCTATAAATACCCCTGCATCT 59.710 45.833 0.00 0.00 0.00 2.90
1997 2145 5.491982 CACCTATAAATACCCCTGCATCTC 58.508 45.833 0.00 0.00 0.00 2.75
1998 2146 4.223032 ACCTATAAATACCCCTGCATCTCG 59.777 45.833 0.00 0.00 0.00 4.04
1999 2147 2.543777 TAAATACCCCTGCATCTCGC 57.456 50.000 0.00 0.00 42.89 5.03
2000 2148 0.839946 AAATACCCCTGCATCTCGCT 59.160 50.000 0.00 0.00 43.06 4.93
2001 2149 0.107456 AATACCCCTGCATCTCGCTG 59.893 55.000 0.00 0.00 43.06 5.18
2002 2150 1.050988 ATACCCCTGCATCTCGCTGT 61.051 55.000 0.00 0.00 43.06 4.40
2003 2151 1.264749 TACCCCTGCATCTCGCTGTT 61.265 55.000 0.00 0.00 43.06 3.16
2004 2152 1.377725 CCCCTGCATCTCGCTGTTT 60.378 57.895 0.00 0.00 43.06 2.83
2005 2153 1.372087 CCCCTGCATCTCGCTGTTTC 61.372 60.000 0.00 0.00 43.06 2.78
2006 2154 0.392193 CCCTGCATCTCGCTGTTTCT 60.392 55.000 0.00 0.00 43.06 2.52
2007 2155 1.005340 CCTGCATCTCGCTGTTTCTC 58.995 55.000 0.00 0.00 43.06 2.87
2008 2156 1.005340 CTGCATCTCGCTGTTTCTCC 58.995 55.000 0.00 0.00 43.06 3.71
2009 2157 0.391661 TGCATCTCGCTGTTTCTCCC 60.392 55.000 0.00 0.00 43.06 4.30
2010 2158 0.391661 GCATCTCGCTGTTTCTCCCA 60.392 55.000 0.00 0.00 37.77 4.37
2011 2159 1.363744 CATCTCGCTGTTTCTCCCAC 58.636 55.000 0.00 0.00 0.00 4.61
2012 2160 0.976641 ATCTCGCTGTTTCTCCCACA 59.023 50.000 0.00 0.00 0.00 4.17
2013 2161 0.318441 TCTCGCTGTTTCTCCCACAG 59.682 55.000 0.00 0.00 43.99 3.66
2014 2162 0.318441 CTCGCTGTTTCTCCCACAGA 59.682 55.000 4.23 0.00 43.90 3.41
2015 2163 0.756294 TCGCTGTTTCTCCCACAGAA 59.244 50.000 4.23 0.00 43.90 3.02
2016 2164 1.151668 CGCTGTTTCTCCCACAGAAG 58.848 55.000 4.23 0.00 43.90 2.85
2017 2165 1.270305 CGCTGTTTCTCCCACAGAAGA 60.270 52.381 4.23 0.00 43.90 2.87
2018 2166 2.147150 GCTGTTTCTCCCACAGAAGAC 58.853 52.381 4.23 0.00 43.90 3.01
2019 2167 2.485479 GCTGTTTCTCCCACAGAAGACA 60.485 50.000 4.23 0.00 43.90 3.41
2020 2168 3.397482 CTGTTTCTCCCACAGAAGACAG 58.603 50.000 0.00 9.93 43.90 3.51
2021 2169 3.038280 TGTTTCTCCCACAGAAGACAGA 58.962 45.455 0.00 0.00 42.37 3.41
2022 2170 3.454447 TGTTTCTCCCACAGAAGACAGAA 59.546 43.478 0.00 0.00 42.37 3.02
2023 2171 3.753294 TTCTCCCACAGAAGACAGAAC 57.247 47.619 0.00 0.00 36.08 3.01
2024 2172 2.677914 TCTCCCACAGAAGACAGAACA 58.322 47.619 0.00 0.00 0.00 3.18
2025 2173 2.630098 TCTCCCACAGAAGACAGAACAG 59.370 50.000 0.00 0.00 0.00 3.16
2026 2174 1.694150 TCCCACAGAAGACAGAACAGG 59.306 52.381 0.00 0.00 0.00 4.00
2027 2175 1.271054 CCCACAGAAGACAGAACAGGG 60.271 57.143 0.00 0.00 0.00 4.45
2028 2176 1.417890 CCACAGAAGACAGAACAGGGT 59.582 52.381 0.00 0.00 0.00 4.34
2029 2177 2.158755 CCACAGAAGACAGAACAGGGTT 60.159 50.000 0.00 0.00 0.00 4.11
2030 2178 3.545703 CACAGAAGACAGAACAGGGTTT 58.454 45.455 0.00 0.00 0.00 3.27
2031 2179 3.561725 CACAGAAGACAGAACAGGGTTTC 59.438 47.826 0.00 0.00 0.00 2.78
2032 2180 3.199946 ACAGAAGACAGAACAGGGTTTCA 59.800 43.478 0.00 0.00 0.00 2.69
2033 2181 4.199310 CAGAAGACAGAACAGGGTTTCAA 58.801 43.478 0.00 0.00 0.00 2.69
2034 2182 4.035675 CAGAAGACAGAACAGGGTTTCAAC 59.964 45.833 0.00 0.00 0.00 3.18
2044 2192 2.396700 GGTTTCAACCGGTCAACGT 58.603 52.632 8.04 0.00 42.24 3.99
2045 2193 0.028374 GGTTTCAACCGGTCAACGTG 59.972 55.000 8.04 1.12 42.24 4.49
2046 2194 0.728542 GTTTCAACCGGTCAACGTGT 59.271 50.000 8.04 0.00 42.24 4.49
2047 2195 0.727970 TTTCAACCGGTCAACGTGTG 59.272 50.000 8.04 0.00 42.24 3.82
2048 2196 1.707239 TTCAACCGGTCAACGTGTGC 61.707 55.000 8.04 0.00 42.24 4.57
2049 2197 3.266376 AACCGGTCAACGTGTGCG 61.266 61.111 8.04 0.00 42.24 5.34
2050 2198 3.719883 AACCGGTCAACGTGTGCGA 62.720 57.895 8.04 0.00 42.24 5.10
2051 2199 3.403057 CCGGTCAACGTGTGCGAG 61.403 66.667 0.00 0.00 42.24 5.03
2052 2200 4.059459 CGGTCAACGTGTGCGAGC 62.059 66.667 0.00 0.00 42.00 5.03
2053 2201 4.059459 GGTCAACGTGTGCGAGCG 62.059 66.667 0.00 0.00 42.00 5.03
2054 2202 4.702826 GTCAACGTGTGCGAGCGC 62.703 66.667 8.08 8.08 42.00 5.92
2068 2216 2.658268 GCGCAAGGCACAACAACC 60.658 61.111 0.30 0.00 42.87 3.77
2069 2217 2.353376 CGCAAGGCACAACAACCG 60.353 61.111 0.00 0.00 0.00 4.44
2070 2218 2.804856 GCAAGGCACAACAACCGT 59.195 55.556 0.00 0.00 0.00 4.83
2071 2219 1.588667 GCAAGGCACAACAACCGTG 60.589 57.895 0.00 0.00 38.32 4.94
2072 2220 1.999071 GCAAGGCACAACAACCGTGA 61.999 55.000 0.00 0.00 37.60 4.35
2073 2221 0.029300 CAAGGCACAACAACCGTGAG 59.971 55.000 0.00 0.00 37.60 3.51
2074 2222 0.107410 AAGGCACAACAACCGTGAGA 60.107 50.000 0.00 0.00 36.43 3.27
2075 2223 0.532862 AGGCACAACAACCGTGAGAG 60.533 55.000 0.00 0.00 36.43 3.20
2076 2224 1.507141 GGCACAACAACCGTGAGAGG 61.507 60.000 0.00 0.00 36.43 3.69
2078 2226 1.539496 GCACAACAACCGTGAGAGGTA 60.539 52.381 0.00 0.00 45.21 3.08
2079 2227 2.132762 CACAACAACCGTGAGAGGTAC 58.867 52.381 0.00 0.00 45.21 3.34
2080 2228 1.758280 ACAACAACCGTGAGAGGTACA 59.242 47.619 0.00 0.00 45.21 2.90
2081 2229 2.132762 CAACAACCGTGAGAGGTACAC 58.867 52.381 0.00 0.00 45.21 2.90
2082 2230 1.405872 ACAACCGTGAGAGGTACACA 58.594 50.000 0.00 0.00 45.21 3.72
2083 2231 1.758280 ACAACCGTGAGAGGTACACAA 59.242 47.619 0.00 0.00 45.21 3.33
2084 2232 2.367567 ACAACCGTGAGAGGTACACAAT 59.632 45.455 0.00 0.00 45.21 2.71
2085 2233 3.181458 ACAACCGTGAGAGGTACACAATT 60.181 43.478 0.00 0.00 45.21 2.32
2086 2234 3.764237 ACCGTGAGAGGTACACAATTT 57.236 42.857 0.00 0.00 43.89 1.82
2087 2235 3.660865 ACCGTGAGAGGTACACAATTTC 58.339 45.455 0.00 0.00 43.89 2.17
2088 2236 3.070446 ACCGTGAGAGGTACACAATTTCA 59.930 43.478 0.00 0.00 43.89 2.69
2089 2237 3.679980 CCGTGAGAGGTACACAATTTCAG 59.320 47.826 0.00 0.00 38.04 3.02
2090 2238 3.123621 CGTGAGAGGTACACAATTTCAGC 59.876 47.826 0.00 0.00 38.04 4.26
2091 2239 4.065088 GTGAGAGGTACACAATTTCAGCA 58.935 43.478 0.00 0.00 38.05 4.41
2092 2240 4.065088 TGAGAGGTACACAATTTCAGCAC 58.935 43.478 0.00 0.00 0.00 4.40
2093 2241 3.067106 AGAGGTACACAATTTCAGCACG 58.933 45.455 0.00 0.00 0.00 5.34
2094 2242 2.806244 GAGGTACACAATTTCAGCACGT 59.194 45.455 0.00 0.00 0.00 4.49
2095 2243 2.806244 AGGTACACAATTTCAGCACGTC 59.194 45.455 0.00 0.00 0.00 4.34
2096 2244 2.806244 GGTACACAATTTCAGCACGTCT 59.194 45.455 0.00 0.00 0.00 4.18
2097 2245 3.991773 GGTACACAATTTCAGCACGTCTA 59.008 43.478 0.00 0.00 0.00 2.59
2098 2246 4.449743 GGTACACAATTTCAGCACGTCTAA 59.550 41.667 0.00 0.00 0.00 2.10
2099 2247 5.121768 GGTACACAATTTCAGCACGTCTAAT 59.878 40.000 0.00 0.00 0.00 1.73
2100 2248 5.689383 ACACAATTTCAGCACGTCTAATT 57.311 34.783 0.00 0.00 0.00 1.40
2101 2249 5.689819 ACACAATTTCAGCACGTCTAATTC 58.310 37.500 0.00 0.00 0.00 2.17
2102 2250 5.470098 ACACAATTTCAGCACGTCTAATTCT 59.530 36.000 0.00 0.00 0.00 2.40
2103 2251 6.017109 ACACAATTTCAGCACGTCTAATTCTT 60.017 34.615 0.00 0.00 0.00 2.52
2104 2252 6.303970 CACAATTTCAGCACGTCTAATTCTTG 59.696 38.462 0.00 0.00 0.00 3.02
2105 2253 6.017109 ACAATTTCAGCACGTCTAATTCTTGT 60.017 34.615 0.00 0.00 0.00 3.16
2106 2254 4.990543 TTCAGCACGTCTAATTCTTGTG 57.009 40.909 0.00 0.00 0.00 3.33
2107 2255 3.325870 TCAGCACGTCTAATTCTTGTGG 58.674 45.455 0.00 0.00 0.00 4.17
2108 2256 3.067106 CAGCACGTCTAATTCTTGTGGT 58.933 45.455 0.00 0.00 41.46 4.16
2109 2257 3.498397 CAGCACGTCTAATTCTTGTGGTT 59.502 43.478 0.00 0.00 39.04 3.67
2110 2258 3.498397 AGCACGTCTAATTCTTGTGGTTG 59.502 43.478 0.00 0.00 37.98 3.77
2111 2259 3.364964 GCACGTCTAATTCTTGTGGTTGG 60.365 47.826 0.00 0.00 0.00 3.77
2112 2260 3.813166 CACGTCTAATTCTTGTGGTTGGT 59.187 43.478 0.00 0.00 0.00 3.67
2113 2261 4.274950 CACGTCTAATTCTTGTGGTTGGTT 59.725 41.667 0.00 0.00 0.00 3.67
2114 2262 4.274950 ACGTCTAATTCTTGTGGTTGGTTG 59.725 41.667 0.00 0.00 0.00 3.77
2115 2263 4.274950 CGTCTAATTCTTGTGGTTGGTTGT 59.725 41.667 0.00 0.00 0.00 3.32
2116 2264 5.467399 CGTCTAATTCTTGTGGTTGGTTGTA 59.533 40.000 0.00 0.00 0.00 2.41
2117 2265 6.565247 CGTCTAATTCTTGTGGTTGGTTGTAC 60.565 42.308 0.00 0.00 0.00 2.90
2118 2266 6.485648 GTCTAATTCTTGTGGTTGGTTGTACT 59.514 38.462 0.00 0.00 0.00 2.73
2119 2267 7.012989 GTCTAATTCTTGTGGTTGGTTGTACTT 59.987 37.037 0.00 0.00 0.00 2.24
2120 2268 6.538945 AATTCTTGTGGTTGGTTGTACTTT 57.461 33.333 0.00 0.00 0.00 2.66
2121 2269 7.648039 AATTCTTGTGGTTGGTTGTACTTTA 57.352 32.000 0.00 0.00 0.00 1.85
2122 2270 6.687081 TTCTTGTGGTTGGTTGTACTTTAG 57.313 37.500 0.00 0.00 0.00 1.85
2123 2271 4.577283 TCTTGTGGTTGGTTGTACTTTAGC 59.423 41.667 0.00 0.00 0.00 3.09
2124 2272 2.873472 TGTGGTTGGTTGTACTTTAGCG 59.127 45.455 0.00 0.00 0.00 4.26
2125 2273 2.874086 GTGGTTGGTTGTACTTTAGCGT 59.126 45.455 0.00 0.00 0.00 5.07
2126 2274 3.313249 GTGGTTGGTTGTACTTTAGCGTT 59.687 43.478 0.00 0.00 0.00 4.84
2127 2275 3.312973 TGGTTGGTTGTACTTTAGCGTTG 59.687 43.478 0.00 0.00 0.00 4.10
2128 2276 3.313249 GGTTGGTTGTACTTTAGCGTTGT 59.687 43.478 0.00 0.00 0.00 3.32
2129 2277 4.201940 GGTTGGTTGTACTTTAGCGTTGTT 60.202 41.667 0.00 0.00 0.00 2.83
2130 2278 5.334319 GTTGGTTGTACTTTAGCGTTGTTT 58.666 37.500 0.00 0.00 0.00 2.83
2131 2279 6.458070 GGTTGGTTGTACTTTAGCGTTGTTTA 60.458 38.462 0.00 0.00 0.00 2.01
2132 2280 6.046885 TGGTTGTACTTTAGCGTTGTTTAC 57.953 37.500 0.00 0.00 0.00 2.01
2133 2281 5.816777 TGGTTGTACTTTAGCGTTGTTTACT 59.183 36.000 0.00 0.00 0.00 2.24
2134 2282 6.315891 TGGTTGTACTTTAGCGTTGTTTACTT 59.684 34.615 0.00 0.00 0.00 2.24
2135 2283 6.847792 GGTTGTACTTTAGCGTTGTTTACTTC 59.152 38.462 0.00 0.00 0.00 3.01
2136 2284 7.254556 GGTTGTACTTTAGCGTTGTTTACTTCT 60.255 37.037 0.00 0.00 0.00 2.85
2137 2285 7.775397 TGTACTTTAGCGTTGTTTACTTCTT 57.225 32.000 0.00 0.00 0.00 2.52
2138 2286 7.844482 TGTACTTTAGCGTTGTTTACTTCTTC 58.156 34.615 0.00 0.00 0.00 2.87
2139 2287 6.296365 ACTTTAGCGTTGTTTACTTCTTCC 57.704 37.500 0.00 0.00 0.00 3.46
2140 2288 4.977741 TTAGCGTTGTTTACTTCTTCCG 57.022 40.909 0.00 0.00 0.00 4.30
2141 2289 2.140717 AGCGTTGTTTACTTCTTCCGG 58.859 47.619 0.00 0.00 0.00 5.14
2142 2290 1.399343 GCGTTGTTTACTTCTTCCGGC 60.399 52.381 0.00 0.00 0.00 6.13
2143 2291 1.136446 CGTTGTTTACTTCTTCCGGCG 60.136 52.381 0.00 0.00 0.00 6.46
2144 2292 1.196127 GTTGTTTACTTCTTCCGGCGG 59.804 52.381 22.51 22.51 0.00 6.13
2145 2293 0.393820 TGTTTACTTCTTCCGGCGGT 59.606 50.000 27.32 7.89 0.00 5.68
2146 2294 1.617850 TGTTTACTTCTTCCGGCGGTA 59.382 47.619 27.32 16.47 0.00 4.02
2147 2295 2.036992 TGTTTACTTCTTCCGGCGGTAA 59.963 45.455 27.32 17.17 0.00 2.85
2148 2296 3.264947 GTTTACTTCTTCCGGCGGTAAT 58.735 45.455 27.32 9.28 0.00 1.89
2149 2297 3.615224 TTACTTCTTCCGGCGGTAATT 57.385 42.857 27.32 14.69 0.00 1.40
2150 2298 2.484742 ACTTCTTCCGGCGGTAATTT 57.515 45.000 27.32 4.28 0.00 1.82
2151 2299 2.081462 ACTTCTTCCGGCGGTAATTTG 58.919 47.619 27.32 14.82 0.00 2.32
2152 2300 2.081462 CTTCTTCCGGCGGTAATTTGT 58.919 47.619 27.32 0.00 0.00 2.83
2153 2301 2.188062 TCTTCCGGCGGTAATTTGTT 57.812 45.000 27.32 0.00 0.00 2.83
2154 2302 1.807742 TCTTCCGGCGGTAATTTGTTG 59.192 47.619 27.32 2.35 0.00 3.33
2155 2303 1.538075 CTTCCGGCGGTAATTTGTTGT 59.462 47.619 27.32 0.00 0.00 3.32
2156 2304 1.606903 TCCGGCGGTAATTTGTTGTT 58.393 45.000 27.32 0.00 0.00 2.83
2157 2305 1.955080 TCCGGCGGTAATTTGTTGTTT 59.045 42.857 27.32 0.00 0.00 2.83
2158 2306 2.055100 CCGGCGGTAATTTGTTGTTTG 58.945 47.619 19.97 0.00 0.00 2.93
2159 2307 1.453900 CGGCGGTAATTTGTTGTTTGC 59.546 47.619 0.00 0.00 0.00 3.68
2160 2308 2.749776 GGCGGTAATTTGTTGTTTGCT 58.250 42.857 0.00 0.00 0.00 3.91
2161 2309 3.127589 GGCGGTAATTTGTTGTTTGCTT 58.872 40.909 0.00 0.00 0.00 3.91
2162 2310 3.558006 GGCGGTAATTTGTTGTTTGCTTT 59.442 39.130 0.00 0.00 0.00 3.51
2163 2311 4.318475 GGCGGTAATTTGTTGTTTGCTTTC 60.318 41.667 0.00 0.00 0.00 2.62
2164 2312 4.268884 GCGGTAATTTGTTGTTTGCTTTCA 59.731 37.500 0.00 0.00 0.00 2.69
2165 2313 5.556194 GCGGTAATTTGTTGTTTGCTTTCAG 60.556 40.000 0.00 0.00 0.00 3.02
2166 2314 5.556194 CGGTAATTTGTTGTTTGCTTTCAGC 60.556 40.000 0.00 0.00 42.82 4.26
2177 2325 2.626088 GCTTTCAGCATGTTGGTCTC 57.374 50.000 9.87 0.00 41.89 3.36
2178 2326 1.135859 GCTTTCAGCATGTTGGTCTCG 60.136 52.381 9.87 0.00 41.89 4.04
2179 2327 2.146342 CTTTCAGCATGTTGGTCTCGT 58.854 47.619 9.87 0.00 37.40 4.18
2180 2328 2.254546 TTCAGCATGTTGGTCTCGTT 57.745 45.000 9.87 0.00 37.40 3.85
2181 2329 2.254546 TCAGCATGTTGGTCTCGTTT 57.745 45.000 9.87 0.00 37.40 3.60
2182 2330 2.143122 TCAGCATGTTGGTCTCGTTTC 58.857 47.619 9.87 0.00 37.40 2.78
2183 2331 1.872952 CAGCATGTTGGTCTCGTTTCA 59.127 47.619 0.85 0.00 0.00 2.69
2184 2332 2.290367 CAGCATGTTGGTCTCGTTTCAA 59.710 45.455 0.85 0.00 0.00 2.69
2185 2333 2.549754 AGCATGTTGGTCTCGTTTCAAG 59.450 45.455 0.00 0.00 0.00 3.02
2186 2334 2.290641 GCATGTTGGTCTCGTTTCAAGT 59.709 45.455 0.00 0.00 0.00 3.16
2187 2335 3.243068 GCATGTTGGTCTCGTTTCAAGTT 60.243 43.478 0.00 0.00 0.00 2.66
2188 2336 4.282068 CATGTTGGTCTCGTTTCAAGTTG 58.718 43.478 0.00 0.00 0.00 3.16
2189 2337 2.096819 TGTTGGTCTCGTTTCAAGTTGC 59.903 45.455 0.00 0.00 0.00 4.17
2190 2338 2.031258 TGGTCTCGTTTCAAGTTGCA 57.969 45.000 0.00 0.00 0.00 4.08
2191 2339 2.571212 TGGTCTCGTTTCAAGTTGCAT 58.429 42.857 0.00 0.00 0.00 3.96
2192 2340 2.290367 TGGTCTCGTTTCAAGTTGCATG 59.710 45.455 0.00 0.00 0.00 4.06
2193 2341 2.310577 GTCTCGTTTCAAGTTGCATGC 58.689 47.619 11.82 11.82 0.00 4.06
2194 2342 1.946081 TCTCGTTTCAAGTTGCATGCA 59.054 42.857 18.46 18.46 0.00 3.96
2195 2343 2.553602 TCTCGTTTCAAGTTGCATGCAT 59.446 40.909 23.37 4.18 0.00 3.96
2196 2344 3.750652 TCTCGTTTCAAGTTGCATGCATA 59.249 39.130 23.37 9.86 0.00 3.14
2197 2345 4.082274 TCGTTTCAAGTTGCATGCATAG 57.918 40.909 23.37 11.71 0.00 2.23
2198 2346 3.501828 TCGTTTCAAGTTGCATGCATAGT 59.498 39.130 23.37 12.35 0.00 2.12
2199 2347 4.023279 TCGTTTCAAGTTGCATGCATAGTT 60.023 37.500 23.37 17.29 0.00 2.24
2200 2348 4.681025 CGTTTCAAGTTGCATGCATAGTTT 59.319 37.500 23.37 10.63 0.00 2.66
2201 2349 5.855925 CGTTTCAAGTTGCATGCATAGTTTA 59.144 36.000 23.37 10.11 0.00 2.01
2202 2350 6.032775 CGTTTCAAGTTGCATGCATAGTTTAG 59.967 38.462 23.37 8.29 0.00 1.85
2203 2351 4.985413 TCAAGTTGCATGCATAGTTTAGC 58.015 39.130 23.37 0.00 0.00 3.09
2204 2352 4.107622 CAAGTTGCATGCATAGTTTAGCC 58.892 43.478 23.37 1.38 0.00 3.93
2205 2353 2.689983 AGTTGCATGCATAGTTTAGCCC 59.310 45.455 23.37 0.00 0.00 5.19
2206 2354 2.426738 GTTGCATGCATAGTTTAGCCCA 59.573 45.455 23.37 0.00 0.00 5.36
2207 2355 2.948115 TGCATGCATAGTTTAGCCCAT 58.052 42.857 18.46 0.00 0.00 4.00
2208 2356 2.624364 TGCATGCATAGTTTAGCCCATG 59.376 45.455 18.46 0.00 34.68 3.66
2209 2357 2.608752 GCATGCATAGTTTAGCCCATGC 60.609 50.000 14.21 7.52 45.56 4.06
2211 2359 2.023673 TGCATAGTTTAGCCCATGCAC 58.976 47.619 4.09 0.00 46.46 4.57
2212 2360 1.338020 GCATAGTTTAGCCCATGCACC 59.662 52.381 0.00 0.00 42.61 5.01
2213 2361 2.653726 CATAGTTTAGCCCATGCACCA 58.346 47.619 0.00 0.00 41.13 4.17
2214 2362 2.122783 TAGTTTAGCCCATGCACCAC 57.877 50.000 0.00 0.00 41.13 4.16
2215 2363 0.611896 AGTTTAGCCCATGCACCACC 60.612 55.000 0.00 0.00 41.13 4.61
2216 2364 0.611896 GTTTAGCCCATGCACCACCT 60.612 55.000 0.00 0.00 41.13 4.00
2217 2365 0.323360 TTTAGCCCATGCACCACCTC 60.323 55.000 0.00 0.00 41.13 3.85
2218 2366 1.207488 TTAGCCCATGCACCACCTCT 61.207 55.000 0.00 0.00 41.13 3.69
2219 2367 1.913951 TAGCCCATGCACCACCTCTG 61.914 60.000 0.00 0.00 41.13 3.35
2220 2368 2.753043 CCCATGCACCACCTCTGC 60.753 66.667 0.00 0.00 35.03 4.26
2221 2369 2.353958 CCATGCACCACCTCTGCT 59.646 61.111 0.00 0.00 35.53 4.24
2222 2370 1.303888 CCATGCACCACCTCTGCTT 60.304 57.895 0.00 0.00 35.53 3.91
2223 2371 0.896940 CCATGCACCACCTCTGCTTT 60.897 55.000 0.00 0.00 35.53 3.51
2224 2372 0.963962 CATGCACCACCTCTGCTTTT 59.036 50.000 0.00 0.00 35.53 2.27
2225 2373 1.068055 CATGCACCACCTCTGCTTTTC 60.068 52.381 0.00 0.00 35.53 2.29
2226 2374 0.183492 TGCACCACCTCTGCTTTTCT 59.817 50.000 0.00 0.00 35.53 2.52
2227 2375 1.419762 TGCACCACCTCTGCTTTTCTA 59.580 47.619 0.00 0.00 35.53 2.10
2228 2376 2.079925 GCACCACCTCTGCTTTTCTAG 58.920 52.381 0.00 0.00 0.00 2.43
2242 2390 6.727824 GCTTTTCTAGCTAACAATCACTGA 57.272 37.500 0.00 0.00 46.77 3.41
2243 2391 7.313951 GCTTTTCTAGCTAACAATCACTGAT 57.686 36.000 0.00 0.00 46.77 2.90
2244 2392 8.425577 GCTTTTCTAGCTAACAATCACTGATA 57.574 34.615 0.00 0.00 46.77 2.15
2245 2393 9.050601 GCTTTTCTAGCTAACAATCACTGATAT 57.949 33.333 0.00 0.00 46.77 1.63
2253 2401 9.499479 AGCTAACAATCACTGATATAAATCTGG 57.501 33.333 0.00 0.00 35.85 3.86
2254 2402 8.725148 GCTAACAATCACTGATATAAATCTGGG 58.275 37.037 0.00 0.00 36.17 4.45
2259 2407 5.482006 TCACTGATATAAATCTGGGATGCG 58.518 41.667 0.00 0.00 38.24 4.73
2260 2408 5.012046 TCACTGATATAAATCTGGGATGCGT 59.988 40.000 0.00 0.00 38.24 5.24
2261 2409 5.349817 CACTGATATAAATCTGGGATGCGTC 59.650 44.000 0.00 0.00 36.78 5.19
2262 2410 5.247110 ACTGATATAAATCTGGGATGCGTCT 59.753 40.000 5.77 0.00 35.85 4.18
2263 2411 6.437477 ACTGATATAAATCTGGGATGCGTCTA 59.563 38.462 5.77 0.00 35.85 2.59
2264 2412 6.867550 TGATATAAATCTGGGATGCGTCTAG 58.132 40.000 5.77 5.24 32.93 2.43
2265 2413 6.437477 TGATATAAATCTGGGATGCGTCTAGT 59.563 38.462 5.77 0.00 32.93 2.57
2266 2414 2.898729 AATCTGGGATGCGTCTAGTG 57.101 50.000 5.77 0.00 0.00 2.74
2267 2415 1.043816 ATCTGGGATGCGTCTAGTGG 58.956 55.000 5.77 0.00 0.00 4.00
2268 2416 1.043116 TCTGGGATGCGTCTAGTGGG 61.043 60.000 5.77 0.00 0.00 4.61
2269 2417 2.109181 GGGATGCGTCTAGTGGGC 59.891 66.667 5.77 0.00 0.00 5.36
2270 2418 2.279517 GGATGCGTCTAGTGGGCG 60.280 66.667 5.77 0.00 0.00 6.13
2271 2419 2.279517 GATGCGTCTAGTGGGCGG 60.280 66.667 1.75 0.00 0.00 6.13
2272 2420 4.530857 ATGCGTCTAGTGGGCGGC 62.531 66.667 1.75 0.00 0.00 6.53
2286 2434 3.912907 CGGCCGGCTACCCACTAG 61.913 72.222 28.56 2.86 0.00 2.57
2287 2435 2.762875 GGCCGGCTACCCACTAGT 60.763 66.667 28.56 0.00 0.00 2.57
2288 2436 2.499685 GCCGGCTACCCACTAGTG 59.500 66.667 22.15 16.34 0.00 2.74
2289 2437 2.499685 CCGGCTACCCACTAGTGC 59.500 66.667 17.86 5.44 0.00 4.40
2290 2438 2.104331 CGGCTACCCACTAGTGCG 59.896 66.667 17.86 11.83 0.00 5.34
2291 2439 2.412323 CGGCTACCCACTAGTGCGA 61.412 63.158 17.86 3.55 0.00 5.10
2292 2440 1.735376 CGGCTACCCACTAGTGCGAT 61.735 60.000 17.86 7.13 0.00 4.58
2293 2441 0.032267 GGCTACCCACTAGTGCGATC 59.968 60.000 17.86 4.81 0.00 3.69
2294 2442 0.317938 GCTACCCACTAGTGCGATCG 60.318 60.000 17.86 11.69 0.00 3.69
2295 2443 1.306148 CTACCCACTAGTGCGATCGA 58.694 55.000 21.57 0.59 0.00 3.59
2296 2444 1.264557 CTACCCACTAGTGCGATCGAG 59.735 57.143 21.57 9.80 0.00 4.04
2297 2445 1.299468 CCCACTAGTGCGATCGAGC 60.299 63.158 21.57 10.34 37.71 5.03
2298 2446 1.655654 CCACTAGTGCGATCGAGCG 60.656 63.158 20.40 20.40 40.67 5.03
2299 2447 1.655654 CACTAGTGCGATCGAGCGG 60.656 63.158 25.73 10.01 40.67 5.52
2300 2448 2.727647 CTAGTGCGATCGAGCGGC 60.728 66.667 25.73 17.00 40.67 6.53
2301 2449 4.266070 TAGTGCGATCGAGCGGCC 62.266 66.667 25.73 9.57 40.67 6.13
2314 2462 4.715523 CGGCCGGCCTGAAAAGGA 62.716 66.667 41.01 0.00 0.00 3.36
2315 2463 2.282887 GGCCGGCCTGAAAAGGAA 60.283 61.111 38.76 0.00 0.00 3.36
2316 2464 1.906333 GGCCGGCCTGAAAAGGAAA 60.906 57.895 38.76 0.00 0.00 3.13
2317 2465 1.289066 GCCGGCCTGAAAAGGAAAC 59.711 57.895 18.11 0.00 0.00 2.78
2319 2467 0.881796 CCGGCCTGAAAAGGAAACTC 59.118 55.000 0.00 0.00 42.68 3.01
2320 2468 0.881796 CGGCCTGAAAAGGAAACTCC 59.118 55.000 0.00 0.00 42.68 3.85
2321 2469 1.257743 GGCCTGAAAAGGAAACTCCC 58.742 55.000 0.00 0.00 42.68 4.30
2322 2470 1.203063 GGCCTGAAAAGGAAACTCCCT 60.203 52.381 0.00 0.00 42.68 4.20
2323 2471 1.889170 GCCTGAAAAGGAAACTCCCTG 59.111 52.381 0.00 0.00 42.68 4.45
2324 2472 2.753168 GCCTGAAAAGGAAACTCCCTGT 60.753 50.000 0.00 0.00 42.68 4.00
2325 2473 3.149981 CCTGAAAAGGAAACTCCCTGTC 58.850 50.000 0.00 0.00 42.68 3.51
2326 2474 3.435026 CCTGAAAAGGAAACTCCCTGTCA 60.435 47.826 0.00 0.00 42.68 3.58
2327 2475 3.551846 TGAAAAGGAAACTCCCTGTCAC 58.448 45.455 0.00 0.00 42.68 3.67
2328 2476 2.658807 AAAGGAAACTCCCTGTCACC 57.341 50.000 0.00 0.00 42.68 4.02
2329 2477 1.821088 AAGGAAACTCCCTGTCACCT 58.179 50.000 0.00 0.00 42.68 4.00
2330 2478 1.353091 AGGAAACTCCCTGTCACCTC 58.647 55.000 0.00 0.00 37.19 3.85
2331 2479 0.037232 GGAAACTCCCTGTCACCTCG 60.037 60.000 0.00 0.00 0.00 4.63
2332 2480 0.670854 GAAACTCCCTGTCACCTCGC 60.671 60.000 0.00 0.00 0.00 5.03
2333 2481 2.436087 AAACTCCCTGTCACCTCGCG 62.436 60.000 0.00 0.00 0.00 5.87
2334 2482 4.135153 CTCCCTGTCACCTCGCGG 62.135 72.222 6.13 0.00 0.00 6.46
2336 2484 4.436998 CCCTGTCACCTCGCGGTC 62.437 72.222 6.13 0.00 43.24 4.79
2337 2485 4.436998 CCTGTCACCTCGCGGTCC 62.437 72.222 6.13 0.00 43.24 4.46
2338 2486 3.374402 CTGTCACCTCGCGGTCCT 61.374 66.667 6.13 0.00 43.24 3.85
2339 2487 3.633094 CTGTCACCTCGCGGTCCTG 62.633 68.421 6.13 0.00 43.24 3.86
2348 2496 3.518998 GCGGTCCTGCGCTCTAGA 61.519 66.667 9.73 0.00 0.00 2.43
2349 2497 3.064987 GCGGTCCTGCGCTCTAGAA 62.065 63.158 9.73 0.00 0.00 2.10
2350 2498 1.511305 CGGTCCTGCGCTCTAGAAA 59.489 57.895 9.73 0.00 0.00 2.52
2351 2499 0.108804 CGGTCCTGCGCTCTAGAAAA 60.109 55.000 9.73 0.00 0.00 2.29
2352 2500 1.646189 GGTCCTGCGCTCTAGAAAAG 58.354 55.000 9.73 0.00 0.00 2.27
2353 2501 1.646189 GTCCTGCGCTCTAGAAAAGG 58.354 55.000 9.73 4.09 0.00 3.11
2354 2502 1.204941 GTCCTGCGCTCTAGAAAAGGA 59.795 52.381 9.73 6.88 0.00 3.36
2355 2503 1.899814 TCCTGCGCTCTAGAAAAGGAA 59.100 47.619 9.73 0.00 30.97 3.36
2356 2504 2.301870 TCCTGCGCTCTAGAAAAGGAAA 59.698 45.455 9.73 0.00 30.97 3.13
2357 2505 2.416893 CCTGCGCTCTAGAAAAGGAAAC 59.583 50.000 9.73 0.00 0.00 2.78
2358 2506 2.416893 CTGCGCTCTAGAAAAGGAAACC 59.583 50.000 9.73 0.00 0.00 3.27
2359 2507 1.393883 GCGCTCTAGAAAAGGAAACCG 59.606 52.381 0.00 0.00 0.00 4.44
2360 2508 2.929592 GCGCTCTAGAAAAGGAAACCGA 60.930 50.000 0.00 0.00 0.00 4.69
2361 2509 2.666994 CGCTCTAGAAAAGGAAACCGAC 59.333 50.000 0.00 0.00 0.00 4.79
2362 2510 3.001414 GCTCTAGAAAAGGAAACCGACC 58.999 50.000 0.00 0.00 0.00 4.79
2363 2511 3.556423 GCTCTAGAAAAGGAAACCGACCA 60.556 47.826 0.00 0.00 0.00 4.02
2364 2512 3.995048 CTCTAGAAAAGGAAACCGACCAC 59.005 47.826 0.00 0.00 0.00 4.16
2365 2513 1.977056 AGAAAAGGAAACCGACCACC 58.023 50.000 0.00 0.00 0.00 4.61
2366 2514 1.213430 AGAAAAGGAAACCGACCACCA 59.787 47.619 0.00 0.00 0.00 4.17
2367 2515 2.025898 GAAAAGGAAACCGACCACCAA 58.974 47.619 0.00 0.00 0.00 3.67
2368 2516 2.146920 AAAGGAAACCGACCACCAAA 57.853 45.000 0.00 0.00 0.00 3.28
2369 2517 1.395635 AAGGAAACCGACCACCAAAC 58.604 50.000 0.00 0.00 0.00 2.93
2370 2518 0.466739 AGGAAACCGACCACCAAACC 60.467 55.000 0.00 0.00 0.00 3.27
2371 2519 1.457823 GGAAACCGACCACCAAACCC 61.458 60.000 0.00 0.00 0.00 4.11
2372 2520 0.752376 GAAACCGACCACCAAACCCA 60.752 55.000 0.00 0.00 0.00 4.51
2373 2521 1.038681 AAACCGACCACCAAACCCAC 61.039 55.000 0.00 0.00 0.00 4.61
2374 2522 2.193517 CCGACCACCAAACCCACA 59.806 61.111 0.00 0.00 0.00 4.17
2375 2523 2.190841 CCGACCACCAAACCCACAC 61.191 63.158 0.00 0.00 0.00 3.82
2376 2524 2.539338 CGACCACCAAACCCACACG 61.539 63.158 0.00 0.00 0.00 4.49
2377 2525 1.153127 GACCACCAAACCCACACGA 60.153 57.895 0.00 0.00 0.00 4.35
2378 2526 0.536460 GACCACCAAACCCACACGAT 60.536 55.000 0.00 0.00 0.00 3.73
2379 2527 0.536460 ACCACCAAACCCACACGATC 60.536 55.000 0.00 0.00 0.00 3.69
2380 2528 0.536233 CCACCAAACCCACACGATCA 60.536 55.000 0.00 0.00 0.00 2.92
2381 2529 1.313772 CACCAAACCCACACGATCAA 58.686 50.000 0.00 0.00 0.00 2.57
2382 2530 1.266718 CACCAAACCCACACGATCAAG 59.733 52.381 0.00 0.00 0.00 3.02
2383 2531 0.240945 CCAAACCCACACGATCAAGC 59.759 55.000 0.00 0.00 0.00 4.01
2384 2532 0.110238 CAAACCCACACGATCAAGCG 60.110 55.000 0.00 0.00 37.29 4.68
2385 2533 1.234615 AAACCCACACGATCAAGCGG 61.235 55.000 0.00 0.00 35.12 5.52
2386 2534 3.499737 CCCACACGATCAAGCGGC 61.500 66.667 0.00 0.00 35.12 6.53
2387 2535 3.499737 CCACACGATCAAGCGGCC 61.500 66.667 0.00 0.00 35.12 6.13
2388 2536 2.741985 CACACGATCAAGCGGCCA 60.742 61.111 2.24 0.00 35.12 5.36
2389 2537 2.434884 ACACGATCAAGCGGCCAG 60.435 61.111 2.24 0.00 35.12 4.85
2390 2538 2.434884 CACGATCAAGCGGCCAGT 60.435 61.111 2.24 0.00 35.12 4.00
2391 2539 2.125512 ACGATCAAGCGGCCAGTC 60.126 61.111 2.24 0.00 35.12 3.51
2392 2540 2.892425 CGATCAAGCGGCCAGTCC 60.892 66.667 2.24 0.00 0.00 3.85
2393 2541 2.586792 GATCAAGCGGCCAGTCCT 59.413 61.111 2.24 0.00 0.00 3.85
2394 2542 1.817099 GATCAAGCGGCCAGTCCTG 60.817 63.158 2.24 0.00 0.00 3.86
2395 2543 2.244117 GATCAAGCGGCCAGTCCTGA 62.244 60.000 2.24 0.00 0.00 3.86
2396 2544 1.630126 ATCAAGCGGCCAGTCCTGAT 61.630 55.000 2.24 0.00 0.00 2.90
2397 2545 0.975556 TCAAGCGGCCAGTCCTGATA 60.976 55.000 2.24 0.00 0.00 2.15
2398 2546 0.531532 CAAGCGGCCAGTCCTGATAG 60.532 60.000 2.24 0.00 0.00 2.08
2399 2547 1.690219 AAGCGGCCAGTCCTGATAGG 61.690 60.000 2.24 0.00 36.46 2.57
2400 2548 2.423446 CGGCCAGTCCTGATAGGC 59.577 66.667 2.24 0.00 46.28 3.93
2402 2550 2.832498 GCCAGTCCTGATAGGCCC 59.168 66.667 0.00 0.00 41.25 5.80
2403 2551 2.072487 GCCAGTCCTGATAGGCCCA 61.072 63.158 0.00 0.00 41.25 5.36
2404 2552 1.635817 GCCAGTCCTGATAGGCCCAA 61.636 60.000 0.00 0.00 41.25 4.12
2405 2553 0.918983 CCAGTCCTGATAGGCCCAAA 59.081 55.000 0.00 0.00 34.61 3.28
2406 2554 1.408822 CCAGTCCTGATAGGCCCAAAC 60.409 57.143 0.00 0.00 34.61 2.93
2407 2555 1.281867 CAGTCCTGATAGGCCCAAACA 59.718 52.381 0.00 0.00 34.61 2.83
2408 2556 1.561542 AGTCCTGATAGGCCCAAACAG 59.438 52.381 0.00 2.19 34.61 3.16
2409 2557 1.559682 GTCCTGATAGGCCCAAACAGA 59.440 52.381 12.91 0.00 34.61 3.41
2410 2558 2.026262 GTCCTGATAGGCCCAAACAGAA 60.026 50.000 12.91 0.00 34.61 3.02
2411 2559 2.239654 TCCTGATAGGCCCAAACAGAAG 59.760 50.000 12.91 0.43 34.61 2.85
2412 2560 2.648059 CTGATAGGCCCAAACAGAAGG 58.352 52.381 0.00 0.00 0.00 3.46
2413 2561 2.239654 CTGATAGGCCCAAACAGAAGGA 59.760 50.000 0.00 0.00 0.00 3.36
2414 2562 2.239654 TGATAGGCCCAAACAGAAGGAG 59.760 50.000 0.00 0.00 0.00 3.69
2415 2563 2.038863 TAGGCCCAAACAGAAGGAGA 57.961 50.000 0.00 0.00 0.00 3.71
2416 2564 0.695347 AGGCCCAAACAGAAGGAGAG 59.305 55.000 0.00 0.00 0.00 3.20
2417 2565 0.693049 GGCCCAAACAGAAGGAGAGA 59.307 55.000 0.00 0.00 0.00 3.10
2418 2566 1.073923 GGCCCAAACAGAAGGAGAGAA 59.926 52.381 0.00 0.00 0.00 2.87
2419 2567 2.489073 GGCCCAAACAGAAGGAGAGAAA 60.489 50.000 0.00 0.00 0.00 2.52
2420 2568 3.222603 GCCCAAACAGAAGGAGAGAAAA 58.777 45.455 0.00 0.00 0.00 2.29
2421 2569 3.254411 GCCCAAACAGAAGGAGAGAAAAG 59.746 47.826 0.00 0.00 0.00 2.27
2422 2570 4.464947 CCCAAACAGAAGGAGAGAAAAGT 58.535 43.478 0.00 0.00 0.00 2.66
2423 2571 4.517075 CCCAAACAGAAGGAGAGAAAAGTC 59.483 45.833 0.00 0.00 0.00 3.01
2424 2572 5.372373 CCAAACAGAAGGAGAGAAAAGTCT 58.628 41.667 0.00 0.00 36.55 3.24
2432 2580 2.842320 GAGAAAAGTCTCCCCACGC 58.158 57.895 0.00 0.00 44.06 5.34
2433 2581 0.321996 GAGAAAAGTCTCCCCACGCT 59.678 55.000 0.00 0.00 44.06 5.07
2434 2582 0.321996 AGAAAAGTCTCCCCACGCTC 59.678 55.000 0.00 0.00 0.00 5.03
2435 2583 0.673956 GAAAAGTCTCCCCACGCTCC 60.674 60.000 0.00 0.00 0.00 4.70
2436 2584 1.415672 AAAAGTCTCCCCACGCTCCA 61.416 55.000 0.00 0.00 0.00 3.86
2437 2585 1.415672 AAAGTCTCCCCACGCTCCAA 61.416 55.000 0.00 0.00 0.00 3.53
2438 2586 2.047179 GTCTCCCCACGCTCCAAC 60.047 66.667 0.00 0.00 0.00 3.77
2439 2587 3.691342 TCTCCCCACGCTCCAACG 61.691 66.667 0.00 0.00 39.50 4.10
2495 2643 4.135293 GCCCCAGGCTTCCAAAAT 57.865 55.556 0.00 0.00 46.69 1.82
2496 2644 1.900351 GCCCCAGGCTTCCAAAATC 59.100 57.895 0.00 0.00 46.69 2.17
2497 2645 1.617018 GCCCCAGGCTTCCAAAATCC 61.617 60.000 0.00 0.00 46.69 3.01
2498 2646 0.252193 CCCCAGGCTTCCAAAATCCA 60.252 55.000 0.00 0.00 0.00 3.41
2499 2647 1.188863 CCCAGGCTTCCAAAATCCAG 58.811 55.000 0.00 0.00 0.00 3.86
2500 2648 0.533951 CCAGGCTTCCAAAATCCAGC 59.466 55.000 0.00 0.00 0.00 4.85
2502 2650 1.900351 GGCTTCCAAAATCCAGCCC 59.100 57.895 0.00 0.00 45.39 5.19
2503 2651 1.617018 GGCTTCCAAAATCCAGCCCC 61.617 60.000 0.00 0.00 45.39 5.80
2504 2652 1.617018 GCTTCCAAAATCCAGCCCCC 61.617 60.000 0.00 0.00 0.00 5.40
2521 2669 2.176889 CCCCCGAGGTATGTATGTAGG 58.823 57.143 0.00 0.00 0.00 3.18
2522 2670 1.549170 CCCCGAGGTATGTATGTAGGC 59.451 57.143 0.00 0.00 0.00 3.93
2523 2671 2.526432 CCCGAGGTATGTATGTAGGCT 58.474 52.381 0.00 0.00 0.00 4.58
2524 2672 3.562826 CCCCGAGGTATGTATGTAGGCTA 60.563 52.174 0.00 0.00 0.00 3.93
2525 2673 4.279145 CCCGAGGTATGTATGTAGGCTAT 58.721 47.826 0.00 0.00 0.00 2.97
2526 2674 5.443283 CCCGAGGTATGTATGTAGGCTATA 58.557 45.833 0.00 0.00 0.00 1.31
2527 2675 5.531659 CCCGAGGTATGTATGTAGGCTATAG 59.468 48.000 0.00 0.00 0.00 1.31
2528 2676 6.354938 CCGAGGTATGTATGTAGGCTATAGA 58.645 44.000 3.21 0.00 0.00 1.98
2529 2677 6.260493 CCGAGGTATGTATGTAGGCTATAGAC 59.740 46.154 8.86 8.86 0.00 2.59
2530 2678 6.260493 CGAGGTATGTATGTAGGCTATAGACC 59.740 46.154 12.58 3.52 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 90 8.356000 AGTATGAACTACCTCTATGCTTATCC 57.644 38.462 0.00 0.00 32.84 2.59
82 102 7.780745 ACTGCTATGAACTAGTATGAACTACCT 59.219 37.037 0.00 0.00 37.15 3.08
113 133 1.939974 TCTTGCATGTATGGACTCGC 58.060 50.000 0.00 0.00 0.00 5.03
119 139 3.365666 GCATTCCGATCTTGCATGTATGG 60.366 47.826 0.00 0.76 36.40 2.74
185 216 3.562232 GTCCGTTGTCCACCCCCA 61.562 66.667 0.00 0.00 0.00 4.96
369 400 1.601759 AAGAAGCGGTGCACATGCT 60.602 52.632 24.98 24.98 42.66 3.79
480 511 2.143925 GTGGTGCAAGTACAAGACCTC 58.856 52.381 0.00 0.00 0.00 3.85
593 624 5.635700 CACTAAAGAAGAGCTAAAGACGCTT 59.364 40.000 0.00 0.00 37.96 4.68
602 633 3.838317 TGAAGGCCACTAAAGAAGAGCTA 59.162 43.478 5.01 0.00 0.00 3.32
635 666 3.000322 CGGACATGCAGAACGAATCTAAC 60.000 47.826 0.00 0.00 36.32 2.34
684 715 1.806542 CAAGTTCGAGAACACCATGGG 59.193 52.381 18.09 7.72 43.47 4.00
915 956 7.334421 TGGCTAATTGAAGAGCTTGTAGTTAAG 59.666 37.037 0.00 0.00 38.79 1.85
1227 1338 0.682209 GCATGGGGATGCACTCAAGT 60.682 55.000 2.14 0.00 46.25 3.16
1273 1384 0.396435 TTGAACTCCATCTGCACCGT 59.604 50.000 0.00 0.00 0.00 4.83
1280 1391 2.544721 TCCTGAGCTTGAACTCCATCT 58.455 47.619 0.00 0.00 35.72 2.90
1493 1604 2.049433 CTTCGTCGTGCTTCCCGT 60.049 61.111 0.00 0.00 0.00 5.28
1549 1660 3.109044 AGCAGACTCGATAGTACGCTA 57.891 47.619 0.00 0.00 40.02 4.26
1672 1794 1.672356 ACTTCGGCAGCACACATCC 60.672 57.895 0.00 0.00 0.00 3.51
1843 1991 1.179152 CAGCCTCAAATGCACCATCA 58.821 50.000 0.00 0.00 0.00 3.07
1942 2090 4.072088 GGCCGCACGAACGAACTG 62.072 66.667 0.14 0.00 34.06 3.16
1954 2102 2.585247 CCTAACAGTAGCGGCCGC 60.585 66.667 42.34 42.34 42.33 6.53
1955 2103 1.226888 GTCCTAACAGTAGCGGCCG 60.227 63.158 24.05 24.05 0.00 6.13
1956 2104 1.143401 GGTCCTAACAGTAGCGGCC 59.857 63.158 0.00 0.00 0.00 6.13
1957 2105 0.459759 GTGGTCCTAACAGTAGCGGC 60.460 60.000 0.00 0.00 0.00 6.53
1958 2106 0.175073 GGTGGTCCTAACAGTAGCGG 59.825 60.000 0.00 0.00 0.00 5.52
1959 2107 1.183549 AGGTGGTCCTAACAGTAGCG 58.816 55.000 0.00 0.00 43.12 4.26
1970 2118 3.244805 GCAGGGGTATTTATAGGTGGTCC 60.245 52.174 0.00 0.00 0.00 4.46
1971 2119 3.393278 TGCAGGGGTATTTATAGGTGGTC 59.607 47.826 0.00 0.00 0.00 4.02
1972 2120 3.399454 TGCAGGGGTATTTATAGGTGGT 58.601 45.455 0.00 0.00 0.00 4.16
1973 2121 4.289672 AGATGCAGGGGTATTTATAGGTGG 59.710 45.833 0.00 0.00 0.00 4.61
1974 2122 5.491982 GAGATGCAGGGGTATTTATAGGTG 58.508 45.833 0.00 0.00 0.00 4.00
1975 2123 4.223032 CGAGATGCAGGGGTATTTATAGGT 59.777 45.833 0.00 0.00 0.00 3.08
1976 2124 4.759782 CGAGATGCAGGGGTATTTATAGG 58.240 47.826 0.00 0.00 0.00 2.57
1977 2125 4.184629 GCGAGATGCAGGGGTATTTATAG 58.815 47.826 0.00 0.00 45.45 1.31
1978 2126 4.202245 GCGAGATGCAGGGGTATTTATA 57.798 45.455 0.00 0.00 45.45 0.98
1979 2127 3.059352 GCGAGATGCAGGGGTATTTAT 57.941 47.619 0.00 0.00 45.45 1.40
1980 2128 2.543777 GCGAGATGCAGGGGTATTTA 57.456 50.000 0.00 0.00 45.45 1.40
1981 2129 3.403936 GCGAGATGCAGGGGTATTT 57.596 52.632 0.00 0.00 45.45 1.40
1991 2139 0.391661 TGGGAGAAACAGCGAGATGC 60.392 55.000 0.00 0.00 46.98 3.91
1992 2140 1.338105 TGTGGGAGAAACAGCGAGATG 60.338 52.381 0.00 0.00 0.00 2.90
1993 2141 0.976641 TGTGGGAGAAACAGCGAGAT 59.023 50.000 0.00 0.00 0.00 2.75
1994 2142 0.318441 CTGTGGGAGAAACAGCGAGA 59.682 55.000 0.00 0.00 38.72 4.04
1995 2143 0.318441 TCTGTGGGAGAAACAGCGAG 59.682 55.000 0.00 0.00 43.88 5.03
1996 2144 0.756294 TTCTGTGGGAGAAACAGCGA 59.244 50.000 0.00 0.00 43.88 4.93
1997 2145 1.151668 CTTCTGTGGGAGAAACAGCG 58.848 55.000 0.00 0.00 43.88 5.18
1998 2146 2.147150 GTCTTCTGTGGGAGAAACAGC 58.853 52.381 0.00 0.00 43.88 4.40
1999 2147 3.070159 TCTGTCTTCTGTGGGAGAAACAG 59.930 47.826 14.22 14.22 45.26 3.16
2000 2148 3.038280 TCTGTCTTCTGTGGGAGAAACA 58.962 45.455 0.00 0.00 40.33 2.83
2001 2149 3.753294 TCTGTCTTCTGTGGGAGAAAC 57.247 47.619 0.00 0.00 40.33 2.78
2002 2150 3.454447 TGTTCTGTCTTCTGTGGGAGAAA 59.546 43.478 0.00 0.00 40.33 2.52
2003 2151 3.038280 TGTTCTGTCTTCTGTGGGAGAA 58.962 45.455 0.00 0.00 38.45 2.87
2004 2152 2.630098 CTGTTCTGTCTTCTGTGGGAGA 59.370 50.000 0.00 0.00 0.00 3.71
2005 2153 2.289320 CCTGTTCTGTCTTCTGTGGGAG 60.289 54.545 0.00 0.00 0.00 4.30
2006 2154 1.694150 CCTGTTCTGTCTTCTGTGGGA 59.306 52.381 0.00 0.00 0.00 4.37
2007 2155 1.271054 CCCTGTTCTGTCTTCTGTGGG 60.271 57.143 0.00 0.00 0.00 4.61
2008 2156 1.417890 ACCCTGTTCTGTCTTCTGTGG 59.582 52.381 0.00 0.00 0.00 4.17
2009 2157 2.918712 ACCCTGTTCTGTCTTCTGTG 57.081 50.000 0.00 0.00 0.00 3.66
2010 2158 3.199946 TGAAACCCTGTTCTGTCTTCTGT 59.800 43.478 0.00 0.00 0.00 3.41
2011 2159 3.808728 TGAAACCCTGTTCTGTCTTCTG 58.191 45.455 0.00 0.00 0.00 3.02
2012 2160 4.200092 GTTGAAACCCTGTTCTGTCTTCT 58.800 43.478 0.00 0.00 0.00 2.85
2013 2161 3.315470 GGTTGAAACCCTGTTCTGTCTTC 59.685 47.826 0.36 0.00 43.43 2.87
2014 2162 3.288092 GGTTGAAACCCTGTTCTGTCTT 58.712 45.455 0.36 0.00 43.43 3.01
2015 2163 2.745152 CGGTTGAAACCCTGTTCTGTCT 60.745 50.000 6.64 0.00 46.53 3.41
2016 2164 1.602377 CGGTTGAAACCCTGTTCTGTC 59.398 52.381 6.64 0.00 46.53 3.51
2017 2165 1.675552 CGGTTGAAACCCTGTTCTGT 58.324 50.000 6.64 0.00 46.53 3.41
2018 2166 0.951558 CCGGTTGAAACCCTGTTCTG 59.048 55.000 6.64 0.00 46.53 3.02
2019 2167 0.549469 ACCGGTTGAAACCCTGTTCT 59.451 50.000 0.00 0.00 46.53 3.01
2020 2168 0.949397 GACCGGTTGAAACCCTGTTC 59.051 55.000 9.42 0.00 46.53 3.18
2021 2169 0.256464 TGACCGGTTGAAACCCTGTT 59.744 50.000 9.42 0.00 46.53 3.16
2022 2170 0.256464 TTGACCGGTTGAAACCCTGT 59.744 50.000 9.42 4.43 46.53 4.00
2023 2171 0.666374 GTTGACCGGTTGAAACCCTG 59.334 55.000 9.42 1.29 46.53 4.45
2024 2172 0.816421 CGTTGACCGGTTGAAACCCT 60.816 55.000 9.42 0.00 46.53 4.34
2025 2173 1.096967 ACGTTGACCGGTTGAAACCC 61.097 55.000 9.42 0.00 46.53 4.11
2026 2174 0.028374 CACGTTGACCGGTTGAAACC 59.972 55.000 9.42 1.88 45.76 3.27
2027 2175 0.728542 ACACGTTGACCGGTTGAAAC 59.271 50.000 9.42 13.29 42.24 2.78
2028 2176 0.727970 CACACGTTGACCGGTTGAAA 59.272 50.000 9.42 0.61 42.24 2.69
2029 2177 1.707239 GCACACGTTGACCGGTTGAA 61.707 55.000 9.42 1.44 42.24 2.69
2030 2178 2.174969 GCACACGTTGACCGGTTGA 61.175 57.895 9.42 0.00 42.24 3.18
2031 2179 2.326550 GCACACGTTGACCGGTTG 59.673 61.111 9.42 4.82 42.24 3.77
2032 2180 3.266376 CGCACACGTTGACCGGTT 61.266 61.111 9.42 0.00 42.24 4.44
2033 2181 4.210093 TCGCACACGTTGACCGGT 62.210 61.111 6.92 6.92 42.24 5.28
2034 2182 3.403057 CTCGCACACGTTGACCGG 61.403 66.667 0.00 0.00 42.24 5.28
2035 2183 4.059459 GCTCGCACACGTTGACCG 62.059 66.667 0.00 0.00 41.18 4.79
2036 2184 4.059459 CGCTCGCACACGTTGACC 62.059 66.667 0.00 0.00 41.18 4.02
2037 2185 4.702826 GCGCTCGCACACGTTGAC 62.703 66.667 9.59 0.00 41.49 3.18
2048 2196 3.179869 TTGTTGTGCCTTGCGCTCG 62.180 57.895 9.73 0.00 40.03 5.03
2049 2197 1.658409 GTTGTTGTGCCTTGCGCTC 60.658 57.895 9.73 0.00 40.03 5.03
2050 2198 2.412937 GTTGTTGTGCCTTGCGCT 59.587 55.556 9.73 0.00 40.03 5.92
2051 2199 2.658268 GGTTGTTGTGCCTTGCGC 60.658 61.111 0.00 0.00 39.75 6.09
2052 2200 2.353376 CGGTTGTTGTGCCTTGCG 60.353 61.111 0.00 0.00 0.00 4.85
2053 2201 1.588667 CACGGTTGTTGTGCCTTGC 60.589 57.895 0.00 0.00 0.00 4.01
2054 2202 0.029300 CTCACGGTTGTTGTGCCTTG 59.971 55.000 0.00 0.00 37.26 3.61
2055 2203 0.107410 TCTCACGGTTGTTGTGCCTT 60.107 50.000 0.00 0.00 37.26 4.35
2056 2204 0.532862 CTCTCACGGTTGTTGTGCCT 60.533 55.000 0.00 0.00 37.26 4.75
2057 2205 1.507141 CCTCTCACGGTTGTTGTGCC 61.507 60.000 0.00 0.00 37.26 5.01
2058 2206 0.814010 ACCTCTCACGGTTGTTGTGC 60.814 55.000 0.00 0.00 37.26 4.57
2059 2207 2.132762 GTACCTCTCACGGTTGTTGTG 58.867 52.381 0.00 0.00 38.49 3.33
2060 2208 1.758280 TGTACCTCTCACGGTTGTTGT 59.242 47.619 0.00 0.00 38.49 3.32
2061 2209 2.132762 GTGTACCTCTCACGGTTGTTG 58.867 52.381 0.00 0.00 38.49 3.33
2062 2210 1.758280 TGTGTACCTCTCACGGTTGTT 59.242 47.619 0.00 0.00 38.49 2.83
2063 2211 1.405872 TGTGTACCTCTCACGGTTGT 58.594 50.000 0.00 0.00 38.49 3.32
2064 2212 2.519377 TTGTGTACCTCTCACGGTTG 57.481 50.000 0.00 0.00 38.49 3.77
2065 2213 3.764237 AATTGTGTACCTCTCACGGTT 57.236 42.857 0.00 0.00 38.49 4.44
2066 2214 3.070446 TGAAATTGTGTACCTCTCACGGT 59.930 43.478 0.00 0.00 41.10 4.83
2067 2215 3.659786 TGAAATTGTGTACCTCTCACGG 58.340 45.455 0.00 0.00 38.48 4.94
2068 2216 3.123621 GCTGAAATTGTGTACCTCTCACG 59.876 47.826 0.00 0.00 38.48 4.35
2069 2217 4.065088 TGCTGAAATTGTGTACCTCTCAC 58.935 43.478 0.00 0.00 36.48 3.51
2070 2218 4.065088 GTGCTGAAATTGTGTACCTCTCA 58.935 43.478 0.00 0.00 0.00 3.27
2071 2219 3.123621 CGTGCTGAAATTGTGTACCTCTC 59.876 47.826 0.00 0.00 0.00 3.20
2072 2220 3.067106 CGTGCTGAAATTGTGTACCTCT 58.933 45.455 0.00 0.00 0.00 3.69
2073 2221 2.806244 ACGTGCTGAAATTGTGTACCTC 59.194 45.455 0.00 0.00 0.00 3.85
2074 2222 2.806244 GACGTGCTGAAATTGTGTACCT 59.194 45.455 0.00 0.00 0.00 3.08
2075 2223 2.806244 AGACGTGCTGAAATTGTGTACC 59.194 45.455 0.00 0.00 0.00 3.34
2076 2224 5.585500 TTAGACGTGCTGAAATTGTGTAC 57.415 39.130 0.00 0.00 0.00 2.90
2077 2225 6.649141 AGAATTAGACGTGCTGAAATTGTGTA 59.351 34.615 0.00 0.00 0.00 2.90
2078 2226 5.470098 AGAATTAGACGTGCTGAAATTGTGT 59.530 36.000 0.00 0.00 0.00 3.72
2079 2227 5.931532 AGAATTAGACGTGCTGAAATTGTG 58.068 37.500 0.00 0.00 0.00 3.33
2080 2228 6.017109 ACAAGAATTAGACGTGCTGAAATTGT 60.017 34.615 0.00 0.00 0.00 2.71
2081 2229 6.303970 CACAAGAATTAGACGTGCTGAAATTG 59.696 38.462 0.00 0.00 0.00 2.32
2082 2230 6.373779 CACAAGAATTAGACGTGCTGAAATT 58.626 36.000 0.00 0.00 0.00 1.82
2083 2231 5.106555 CCACAAGAATTAGACGTGCTGAAAT 60.107 40.000 0.00 0.00 0.00 2.17
2084 2232 4.213270 CCACAAGAATTAGACGTGCTGAAA 59.787 41.667 0.00 0.00 0.00 2.69
2085 2233 3.745975 CCACAAGAATTAGACGTGCTGAA 59.254 43.478 0.00 0.00 0.00 3.02
2086 2234 3.244078 ACCACAAGAATTAGACGTGCTGA 60.244 43.478 0.00 0.00 0.00 4.26
2087 2235 3.067106 ACCACAAGAATTAGACGTGCTG 58.933 45.455 0.00 0.00 0.00 4.41
2088 2236 3.402628 ACCACAAGAATTAGACGTGCT 57.597 42.857 0.00 0.00 0.00 4.40
2089 2237 3.364964 CCAACCACAAGAATTAGACGTGC 60.365 47.826 0.00 0.00 0.00 5.34
2090 2238 3.813166 ACCAACCACAAGAATTAGACGTG 59.187 43.478 0.00 0.00 0.00 4.49
2091 2239 4.081322 ACCAACCACAAGAATTAGACGT 57.919 40.909 0.00 0.00 0.00 4.34
2092 2240 4.274950 ACAACCAACCACAAGAATTAGACG 59.725 41.667 0.00 0.00 0.00 4.18
2093 2241 5.767816 ACAACCAACCACAAGAATTAGAC 57.232 39.130 0.00 0.00 0.00 2.59
2094 2242 6.597562 AGTACAACCAACCACAAGAATTAGA 58.402 36.000 0.00 0.00 0.00 2.10
2095 2243 6.877611 AGTACAACCAACCACAAGAATTAG 57.122 37.500 0.00 0.00 0.00 1.73
2096 2244 7.648039 AAAGTACAACCAACCACAAGAATTA 57.352 32.000 0.00 0.00 0.00 1.40
2097 2245 6.538945 AAAGTACAACCAACCACAAGAATT 57.461 33.333 0.00 0.00 0.00 2.17
2098 2246 6.238925 GCTAAAGTACAACCAACCACAAGAAT 60.239 38.462 0.00 0.00 0.00 2.40
2099 2247 5.066764 GCTAAAGTACAACCAACCACAAGAA 59.933 40.000 0.00 0.00 0.00 2.52
2100 2248 4.577283 GCTAAAGTACAACCAACCACAAGA 59.423 41.667 0.00 0.00 0.00 3.02
2101 2249 4.553938 CGCTAAAGTACAACCAACCACAAG 60.554 45.833 0.00 0.00 0.00 3.16
2102 2250 3.312973 CGCTAAAGTACAACCAACCACAA 59.687 43.478 0.00 0.00 0.00 3.33
2103 2251 2.873472 CGCTAAAGTACAACCAACCACA 59.127 45.455 0.00 0.00 0.00 4.17
2104 2252 2.874086 ACGCTAAAGTACAACCAACCAC 59.126 45.455 0.00 0.00 0.00 4.16
2105 2253 3.196939 ACGCTAAAGTACAACCAACCA 57.803 42.857 0.00 0.00 0.00 3.67
2106 2254 3.313249 ACAACGCTAAAGTACAACCAACC 59.687 43.478 0.00 0.00 0.00 3.77
2107 2255 4.541085 ACAACGCTAAAGTACAACCAAC 57.459 40.909 0.00 0.00 0.00 3.77
2108 2256 5.564048 AAACAACGCTAAAGTACAACCAA 57.436 34.783 0.00 0.00 0.00 3.67
2109 2257 5.816777 AGTAAACAACGCTAAAGTACAACCA 59.183 36.000 0.00 0.00 0.00 3.67
2110 2258 6.291067 AGTAAACAACGCTAAAGTACAACC 57.709 37.500 0.00 0.00 0.00 3.77
2111 2259 7.624661 AGAAGTAAACAACGCTAAAGTACAAC 58.375 34.615 0.00 0.00 0.00 3.32
2112 2260 7.775397 AGAAGTAAACAACGCTAAAGTACAA 57.225 32.000 0.00 0.00 0.00 2.41
2113 2261 7.042523 GGAAGAAGTAAACAACGCTAAAGTACA 60.043 37.037 0.00 0.00 0.00 2.90
2114 2262 7.286508 GGAAGAAGTAAACAACGCTAAAGTAC 58.713 38.462 0.00 0.00 0.00 2.73
2115 2263 6.144402 CGGAAGAAGTAAACAACGCTAAAGTA 59.856 38.462 0.00 0.00 0.00 2.24
2116 2264 5.050567 CGGAAGAAGTAAACAACGCTAAAGT 60.051 40.000 0.00 0.00 0.00 2.66
2117 2265 5.371629 CGGAAGAAGTAAACAACGCTAAAG 58.628 41.667 0.00 0.00 0.00 1.85
2118 2266 4.211794 CCGGAAGAAGTAAACAACGCTAAA 59.788 41.667 0.00 0.00 0.00 1.85
2119 2267 3.742369 CCGGAAGAAGTAAACAACGCTAA 59.258 43.478 0.00 0.00 0.00 3.09
2120 2268 3.319755 CCGGAAGAAGTAAACAACGCTA 58.680 45.455 0.00 0.00 0.00 4.26
2121 2269 2.140717 CCGGAAGAAGTAAACAACGCT 58.859 47.619 0.00 0.00 0.00 5.07
2122 2270 1.399343 GCCGGAAGAAGTAAACAACGC 60.399 52.381 5.05 0.00 0.00 4.84
2123 2271 1.136446 CGCCGGAAGAAGTAAACAACG 60.136 52.381 5.05 0.00 0.00 4.10
2124 2272 1.196127 CCGCCGGAAGAAGTAAACAAC 59.804 52.381 5.05 0.00 0.00 3.32
2125 2273 1.202675 ACCGCCGGAAGAAGTAAACAA 60.203 47.619 11.71 0.00 0.00 2.83
2126 2274 0.393820 ACCGCCGGAAGAAGTAAACA 59.606 50.000 11.71 0.00 0.00 2.83
2127 2275 2.368655 TACCGCCGGAAGAAGTAAAC 57.631 50.000 11.71 0.00 0.00 2.01
2128 2276 3.615224 ATTACCGCCGGAAGAAGTAAA 57.385 42.857 11.71 0.00 0.00 2.01
2129 2277 3.615224 AATTACCGCCGGAAGAAGTAA 57.385 42.857 11.71 5.14 0.00 2.24
2130 2278 3.264104 CAAATTACCGCCGGAAGAAGTA 58.736 45.455 11.71 0.00 0.00 2.24
2131 2279 2.081462 CAAATTACCGCCGGAAGAAGT 58.919 47.619 11.71 0.00 0.00 3.01
2132 2280 2.081462 ACAAATTACCGCCGGAAGAAG 58.919 47.619 11.71 0.00 0.00 2.85
2133 2281 2.188062 ACAAATTACCGCCGGAAGAA 57.812 45.000 11.71 0.51 0.00 2.52
2134 2282 1.807742 CAACAAATTACCGCCGGAAGA 59.192 47.619 11.71 0.00 0.00 2.87
2135 2283 1.538075 ACAACAAATTACCGCCGGAAG 59.462 47.619 11.71 0.00 0.00 3.46
2136 2284 1.606903 ACAACAAATTACCGCCGGAA 58.393 45.000 11.71 0.00 0.00 4.30
2137 2285 1.606903 AACAACAAATTACCGCCGGA 58.393 45.000 11.71 0.00 0.00 5.14
2138 2286 2.055100 CAAACAACAAATTACCGCCGG 58.945 47.619 0.00 0.00 0.00 6.13
2139 2287 1.453900 GCAAACAACAAATTACCGCCG 59.546 47.619 0.00 0.00 0.00 6.46
2140 2288 2.749776 AGCAAACAACAAATTACCGCC 58.250 42.857 0.00 0.00 0.00 6.13
2141 2289 4.268884 TGAAAGCAAACAACAAATTACCGC 59.731 37.500 0.00 0.00 0.00 5.68
2142 2290 5.957910 TGAAAGCAAACAACAAATTACCG 57.042 34.783 0.00 0.00 0.00 4.02
2159 2307 2.146342 ACGAGACCAACATGCTGAAAG 58.854 47.619 0.00 0.00 0.00 2.62
2160 2308 2.254546 ACGAGACCAACATGCTGAAA 57.745 45.000 0.00 0.00 0.00 2.69
2161 2309 2.254546 AACGAGACCAACATGCTGAA 57.745 45.000 0.00 0.00 0.00 3.02
2162 2310 2.143122 GAAACGAGACCAACATGCTGA 58.857 47.619 0.00 0.00 0.00 4.26
2163 2311 1.872952 TGAAACGAGACCAACATGCTG 59.127 47.619 0.00 0.00 0.00 4.41
2164 2312 2.254546 TGAAACGAGACCAACATGCT 57.745 45.000 0.00 0.00 0.00 3.79
2165 2313 2.290641 ACTTGAAACGAGACCAACATGC 59.709 45.455 0.00 0.00 0.00 4.06
2166 2314 4.282068 CAACTTGAAACGAGACCAACATG 58.718 43.478 0.00 0.00 0.00 3.21
2167 2315 3.243068 GCAACTTGAAACGAGACCAACAT 60.243 43.478 0.00 0.00 0.00 2.71
2168 2316 2.096819 GCAACTTGAAACGAGACCAACA 59.903 45.455 0.00 0.00 0.00 3.33
2169 2317 2.096819 TGCAACTTGAAACGAGACCAAC 59.903 45.455 0.00 0.00 0.00 3.77
2170 2318 2.360844 TGCAACTTGAAACGAGACCAA 58.639 42.857 0.00 0.00 0.00 3.67
2171 2319 2.031258 TGCAACTTGAAACGAGACCA 57.969 45.000 0.00 0.00 0.00 4.02
2172 2320 2.918131 GCATGCAACTTGAAACGAGACC 60.918 50.000 14.21 0.00 0.00 3.85
2173 2321 2.286950 TGCATGCAACTTGAAACGAGAC 60.287 45.455 20.30 0.00 0.00 3.36
2174 2322 1.946081 TGCATGCAACTTGAAACGAGA 59.054 42.857 20.30 0.00 0.00 4.04
2175 2323 2.404265 TGCATGCAACTTGAAACGAG 57.596 45.000 20.30 0.00 0.00 4.18
2176 2324 3.501828 ACTATGCATGCAACTTGAAACGA 59.498 39.130 26.68 0.00 0.00 3.85
2177 2325 3.825308 ACTATGCATGCAACTTGAAACG 58.175 40.909 26.68 7.58 0.00 3.60
2178 2326 6.183360 GCTAAACTATGCATGCAACTTGAAAC 60.183 38.462 26.68 8.33 0.00 2.78
2179 2327 5.863397 GCTAAACTATGCATGCAACTTGAAA 59.137 36.000 26.68 7.07 0.00 2.69
2180 2328 5.401550 GCTAAACTATGCATGCAACTTGAA 58.598 37.500 26.68 8.62 0.00 2.69
2181 2329 4.142403 GGCTAAACTATGCATGCAACTTGA 60.142 41.667 26.68 8.24 0.00 3.02
2182 2330 4.107622 GGCTAAACTATGCATGCAACTTG 58.892 43.478 26.68 16.47 0.00 3.16
2183 2331 3.131046 GGGCTAAACTATGCATGCAACTT 59.869 43.478 26.68 16.73 0.00 2.66
2184 2332 2.689983 GGGCTAAACTATGCATGCAACT 59.310 45.455 26.68 12.19 0.00 3.16
2185 2333 2.426738 TGGGCTAAACTATGCATGCAAC 59.573 45.455 26.68 6.63 0.00 4.17
2186 2334 2.732763 TGGGCTAAACTATGCATGCAA 58.267 42.857 26.68 13.05 0.00 4.08
2187 2335 2.433662 TGGGCTAAACTATGCATGCA 57.566 45.000 25.04 25.04 0.00 3.96
2188 2336 2.608752 GCATGGGCTAAACTATGCATGC 60.609 50.000 11.82 11.82 43.93 4.06
2189 2337 3.293311 GCATGGGCTAAACTATGCATG 57.707 47.619 10.16 1.82 43.93 4.06
2192 2340 1.338020 GGTGCATGGGCTAAACTATGC 59.662 52.381 7.46 7.46 44.56 3.14
2193 2341 2.358898 GTGGTGCATGGGCTAAACTATG 59.641 50.000 0.00 0.00 41.91 2.23
2194 2342 2.654863 GTGGTGCATGGGCTAAACTAT 58.345 47.619 0.00 0.00 41.91 2.12
2195 2343 1.340600 GGTGGTGCATGGGCTAAACTA 60.341 52.381 0.00 0.00 41.91 2.24
2196 2344 0.611896 GGTGGTGCATGGGCTAAACT 60.612 55.000 0.00 0.00 41.91 2.66
2197 2345 0.611896 AGGTGGTGCATGGGCTAAAC 60.612 55.000 0.00 0.00 41.91 2.01
2198 2346 0.323360 GAGGTGGTGCATGGGCTAAA 60.323 55.000 0.00 0.00 41.91 1.85
2199 2347 1.207488 AGAGGTGGTGCATGGGCTAA 61.207 55.000 0.00 0.00 41.91 3.09
2200 2348 1.616327 AGAGGTGGTGCATGGGCTA 60.616 57.895 0.00 0.00 41.91 3.93
2201 2349 2.937689 AGAGGTGGTGCATGGGCT 60.938 61.111 0.00 0.00 41.91 5.19
2202 2350 2.753043 CAGAGGTGGTGCATGGGC 60.753 66.667 0.00 0.00 41.68 5.36
2203 2351 2.753043 GCAGAGGTGGTGCATGGG 60.753 66.667 0.00 0.00 40.86 4.00
2204 2352 0.896940 AAAGCAGAGGTGGTGCATGG 60.897 55.000 0.00 0.00 43.82 3.66
2205 2353 0.963962 AAAAGCAGAGGTGGTGCATG 59.036 50.000 0.00 0.00 43.82 4.06
2206 2354 1.202976 AGAAAAGCAGAGGTGGTGCAT 60.203 47.619 0.00 0.00 43.82 3.96
2207 2355 0.183492 AGAAAAGCAGAGGTGGTGCA 59.817 50.000 0.00 0.00 43.82 4.57
2208 2356 2.079925 CTAGAAAAGCAGAGGTGGTGC 58.920 52.381 0.00 0.00 41.54 5.01
2227 2375 9.499479 CCAGATTTATATCAGTGATTGTTAGCT 57.501 33.333 11.68 0.82 32.95 3.32
2228 2376 8.725148 CCCAGATTTATATCAGTGATTGTTAGC 58.275 37.037 11.68 0.00 32.95 3.09
2231 2379 9.293404 CATCCCAGATTTATATCAGTGATTGTT 57.707 33.333 11.68 0.00 32.95 2.83
2232 2380 7.392673 GCATCCCAGATTTATATCAGTGATTGT 59.607 37.037 11.68 3.52 32.95 2.71
2233 2381 7.413767 CGCATCCCAGATTTATATCAGTGATTG 60.414 40.741 11.68 1.28 32.95 2.67
2234 2382 6.596888 CGCATCCCAGATTTATATCAGTGATT 59.403 38.462 11.68 2.21 32.95 2.57
2235 2383 6.111382 CGCATCCCAGATTTATATCAGTGAT 58.889 40.000 11.12 11.12 32.95 3.06
2236 2384 5.012046 ACGCATCCCAGATTTATATCAGTGA 59.988 40.000 0.00 0.00 32.95 3.41
2237 2385 5.240891 ACGCATCCCAGATTTATATCAGTG 58.759 41.667 0.00 0.00 32.95 3.66
2238 2386 5.247110 AGACGCATCCCAGATTTATATCAGT 59.753 40.000 0.00 0.00 32.95 3.41
2239 2387 5.728471 AGACGCATCCCAGATTTATATCAG 58.272 41.667 0.00 0.00 32.95 2.90
2240 2388 5.745312 AGACGCATCCCAGATTTATATCA 57.255 39.130 0.00 0.00 32.95 2.15
2241 2389 6.754209 CACTAGACGCATCCCAGATTTATATC 59.246 42.308 0.00 0.00 0.00 1.63
2242 2390 6.351371 CCACTAGACGCATCCCAGATTTATAT 60.351 42.308 0.00 0.00 0.00 0.86
2243 2391 5.047306 CCACTAGACGCATCCCAGATTTATA 60.047 44.000 0.00 0.00 0.00 0.98
2244 2392 4.262635 CCACTAGACGCATCCCAGATTTAT 60.263 45.833 0.00 0.00 0.00 1.40
2245 2393 3.069586 CCACTAGACGCATCCCAGATTTA 59.930 47.826 0.00 0.00 0.00 1.40
2246 2394 2.158900 CCACTAGACGCATCCCAGATTT 60.159 50.000 0.00 0.00 0.00 2.17
2247 2395 1.414181 CCACTAGACGCATCCCAGATT 59.586 52.381 0.00 0.00 0.00 2.40
2248 2396 1.043816 CCACTAGACGCATCCCAGAT 58.956 55.000 0.00 0.00 0.00 2.90
2249 2397 1.043116 CCCACTAGACGCATCCCAGA 61.043 60.000 0.00 0.00 0.00 3.86
2250 2398 1.443407 CCCACTAGACGCATCCCAG 59.557 63.158 0.00 0.00 0.00 4.45
2251 2399 2.731571 GCCCACTAGACGCATCCCA 61.732 63.158 0.00 0.00 0.00 4.37
2252 2400 2.109181 GCCCACTAGACGCATCCC 59.891 66.667 0.00 0.00 0.00 3.85
2253 2401 2.279517 CGCCCACTAGACGCATCC 60.280 66.667 0.00 0.00 0.00 3.51
2254 2402 2.279517 CCGCCCACTAGACGCATC 60.280 66.667 0.00 0.00 0.00 3.91
2255 2403 4.530857 GCCGCCCACTAGACGCAT 62.531 66.667 0.00 0.00 0.00 4.73
2269 2417 3.912907 CTAGTGGGTAGCCGGCCG 61.913 72.222 26.15 21.04 0.00 6.13
2270 2418 2.762875 ACTAGTGGGTAGCCGGCC 60.763 66.667 26.15 8.83 30.92 6.13
2271 2419 2.499685 CACTAGTGGGTAGCCGGC 59.500 66.667 21.89 21.89 30.92 6.13
2272 2420 2.499685 GCACTAGTGGGTAGCCGG 59.500 66.667 23.95 0.00 30.92 6.13
2273 2421 1.735376 ATCGCACTAGTGGGTAGCCG 61.735 60.000 31.77 21.47 43.11 5.52
2274 2422 0.032267 GATCGCACTAGTGGGTAGCC 59.968 60.000 31.77 18.60 43.11 3.93
2275 2423 0.317938 CGATCGCACTAGTGGGTAGC 60.318 60.000 31.77 21.98 43.11 3.58
2276 2424 1.264557 CTCGATCGCACTAGTGGGTAG 59.735 57.143 31.77 24.27 43.11 3.18
2277 2425 1.306148 CTCGATCGCACTAGTGGGTA 58.694 55.000 31.77 21.60 43.11 3.69
2278 2426 2.005960 GCTCGATCGCACTAGTGGGT 62.006 60.000 31.77 21.94 43.11 4.51
2279 2427 1.299468 GCTCGATCGCACTAGTGGG 60.299 63.158 28.93 28.93 43.85 4.61
2280 2428 1.655654 CGCTCGATCGCACTAGTGG 60.656 63.158 23.95 13.97 0.00 4.00
2281 2429 1.655654 CCGCTCGATCGCACTAGTG 60.656 63.158 18.93 18.93 0.00 2.74
2282 2430 2.716244 CCGCTCGATCGCACTAGT 59.284 61.111 11.09 0.00 0.00 2.57
2283 2431 2.727647 GCCGCTCGATCGCACTAG 60.728 66.667 11.09 3.46 0.00 2.57
2284 2432 4.266070 GGCCGCTCGATCGCACTA 62.266 66.667 11.09 0.00 0.00 2.74
2297 2445 4.715523 TCCTTTTCAGGCCGGCCG 62.716 66.667 38.88 31.40 40.58 6.13
2298 2446 1.906333 TTTCCTTTTCAGGCCGGCC 60.906 57.895 39.29 39.29 40.58 6.13
2299 2447 1.179174 AGTTTCCTTTTCAGGCCGGC 61.179 55.000 21.18 21.18 40.58 6.13
2300 2448 0.881796 GAGTTTCCTTTTCAGGCCGG 59.118 55.000 0.00 0.00 40.58 6.13
2301 2449 0.881796 GGAGTTTCCTTTTCAGGCCG 59.118 55.000 0.00 0.00 40.58 6.13
2302 2450 1.203063 AGGGAGTTTCCTTTTCAGGCC 60.203 52.381 0.00 0.00 40.58 5.19
2303 2451 1.889170 CAGGGAGTTTCCTTTTCAGGC 59.111 52.381 0.00 0.00 40.58 4.85
2304 2452 3.149981 GACAGGGAGTTTCCTTTTCAGG 58.850 50.000 0.00 0.00 42.50 3.86
2305 2453 3.565902 GTGACAGGGAGTTTCCTTTTCAG 59.434 47.826 0.00 0.00 36.57 3.02
2306 2454 3.551846 GTGACAGGGAGTTTCCTTTTCA 58.448 45.455 0.00 0.00 36.57 2.69
2307 2455 2.885266 GGTGACAGGGAGTTTCCTTTTC 59.115 50.000 0.00 0.00 36.57 2.29
2308 2456 2.514160 AGGTGACAGGGAGTTTCCTTTT 59.486 45.455 0.00 0.00 36.57 2.27
2309 2457 2.106684 GAGGTGACAGGGAGTTTCCTTT 59.893 50.000 0.00 0.00 36.57 3.11
2310 2458 1.700186 GAGGTGACAGGGAGTTTCCTT 59.300 52.381 0.00 0.00 36.57 3.36
2311 2459 1.353091 GAGGTGACAGGGAGTTTCCT 58.647 55.000 0.00 0.00 36.57 3.36
2312 2460 0.037232 CGAGGTGACAGGGAGTTTCC 60.037 60.000 0.00 0.00 35.23 3.13
2313 2461 0.670854 GCGAGGTGACAGGGAGTTTC 60.671 60.000 0.00 0.00 0.00 2.78
2314 2462 1.371558 GCGAGGTGACAGGGAGTTT 59.628 57.895 0.00 0.00 0.00 2.66
2315 2463 2.932234 CGCGAGGTGACAGGGAGTT 61.932 63.158 0.00 0.00 0.00 3.01
2316 2464 3.374402 CGCGAGGTGACAGGGAGT 61.374 66.667 0.00 0.00 0.00 3.85
2332 2480 0.108804 TTTTCTAGAGCGCAGGACCG 60.109 55.000 11.47 0.00 0.00 4.79
2333 2481 1.646189 CTTTTCTAGAGCGCAGGACC 58.354 55.000 11.47 0.00 0.00 4.46
2334 2482 1.204941 TCCTTTTCTAGAGCGCAGGAC 59.795 52.381 11.47 0.00 0.00 3.85
2335 2483 1.557099 TCCTTTTCTAGAGCGCAGGA 58.443 50.000 11.47 7.56 0.00 3.86
2336 2484 2.386661 TTCCTTTTCTAGAGCGCAGG 57.613 50.000 11.47 4.75 0.00 4.85
2337 2485 2.416893 GGTTTCCTTTTCTAGAGCGCAG 59.583 50.000 11.47 0.00 0.00 5.18
2338 2486 2.423577 GGTTTCCTTTTCTAGAGCGCA 58.576 47.619 11.47 0.00 0.00 6.09
2339 2487 1.393883 CGGTTTCCTTTTCTAGAGCGC 59.606 52.381 0.00 0.00 0.00 5.92
2340 2488 2.666994 GTCGGTTTCCTTTTCTAGAGCG 59.333 50.000 0.00 0.00 0.00 5.03
2341 2489 3.001414 GGTCGGTTTCCTTTTCTAGAGC 58.999 50.000 0.00 0.00 0.00 4.09
2342 2490 3.995048 GTGGTCGGTTTCCTTTTCTAGAG 59.005 47.826 0.00 0.00 0.00 2.43
2343 2491 3.244318 GGTGGTCGGTTTCCTTTTCTAGA 60.244 47.826 0.00 0.00 0.00 2.43
2344 2492 3.072211 GGTGGTCGGTTTCCTTTTCTAG 58.928 50.000 0.00 0.00 0.00 2.43
2345 2493 2.438763 TGGTGGTCGGTTTCCTTTTCTA 59.561 45.455 0.00 0.00 0.00 2.10
2346 2494 1.213430 TGGTGGTCGGTTTCCTTTTCT 59.787 47.619 0.00 0.00 0.00 2.52
2347 2495 1.682740 TGGTGGTCGGTTTCCTTTTC 58.317 50.000 0.00 0.00 0.00 2.29
2348 2496 2.146920 TTGGTGGTCGGTTTCCTTTT 57.853 45.000 0.00 0.00 0.00 2.27
2349 2497 1.752498 GTTTGGTGGTCGGTTTCCTTT 59.248 47.619 0.00 0.00 0.00 3.11
2350 2498 1.395635 GTTTGGTGGTCGGTTTCCTT 58.604 50.000 0.00 0.00 0.00 3.36
2351 2499 0.466739 GGTTTGGTGGTCGGTTTCCT 60.467 55.000 0.00 0.00 0.00 3.36
2352 2500 1.457823 GGGTTTGGTGGTCGGTTTCC 61.458 60.000 0.00 0.00 0.00 3.13
2353 2501 0.752376 TGGGTTTGGTGGTCGGTTTC 60.752 55.000 0.00 0.00 0.00 2.78
2354 2502 1.038681 GTGGGTTTGGTGGTCGGTTT 61.039 55.000 0.00 0.00 0.00 3.27
2355 2503 1.454295 GTGGGTTTGGTGGTCGGTT 60.454 57.895 0.00 0.00 0.00 4.44
2356 2504 2.193786 GTGGGTTTGGTGGTCGGT 59.806 61.111 0.00 0.00 0.00 4.69
2357 2505 2.190841 GTGTGGGTTTGGTGGTCGG 61.191 63.158 0.00 0.00 0.00 4.79
2358 2506 2.539338 CGTGTGGGTTTGGTGGTCG 61.539 63.158 0.00 0.00 0.00 4.79
2359 2507 0.536460 ATCGTGTGGGTTTGGTGGTC 60.536 55.000 0.00 0.00 0.00 4.02
2360 2508 0.536460 GATCGTGTGGGTTTGGTGGT 60.536 55.000 0.00 0.00 0.00 4.16
2361 2509 0.536233 TGATCGTGTGGGTTTGGTGG 60.536 55.000 0.00 0.00 0.00 4.61
2362 2510 1.266718 CTTGATCGTGTGGGTTTGGTG 59.733 52.381 0.00 0.00 0.00 4.17
2363 2511 1.604604 CTTGATCGTGTGGGTTTGGT 58.395 50.000 0.00 0.00 0.00 3.67
2364 2512 0.240945 GCTTGATCGTGTGGGTTTGG 59.759 55.000 0.00 0.00 0.00 3.28
2365 2513 0.110238 CGCTTGATCGTGTGGGTTTG 60.110 55.000 0.00 0.00 0.00 2.93
2366 2514 1.234615 CCGCTTGATCGTGTGGGTTT 61.235 55.000 8.87 0.00 0.00 3.27
2367 2515 1.671054 CCGCTTGATCGTGTGGGTT 60.671 57.895 8.87 0.00 0.00 4.11
2368 2516 2.047274 CCGCTTGATCGTGTGGGT 60.047 61.111 8.87 0.00 0.00 4.51
2369 2517 3.499737 GCCGCTTGATCGTGTGGG 61.500 66.667 15.94 3.14 34.66 4.61
2370 2518 3.499737 GGCCGCTTGATCGTGTGG 61.500 66.667 11.57 11.57 36.95 4.17
2371 2519 2.741985 TGGCCGCTTGATCGTGTG 60.742 61.111 0.00 0.00 0.00 3.82
2372 2520 2.434884 CTGGCCGCTTGATCGTGT 60.435 61.111 0.00 0.00 0.00 4.49
2373 2521 2.434884 ACTGGCCGCTTGATCGTG 60.435 61.111 0.00 0.00 0.00 4.35
2374 2522 2.125512 GACTGGCCGCTTGATCGT 60.126 61.111 0.00 0.00 0.00 3.73
2375 2523 2.892425 GGACTGGCCGCTTGATCG 60.892 66.667 0.00 0.00 0.00 3.69
2376 2524 1.817099 CAGGACTGGCCGCTTGATC 60.817 63.158 0.00 0.00 43.43 2.92
2377 2525 1.630126 ATCAGGACTGGCCGCTTGAT 61.630 55.000 10.57 10.57 43.43 2.57
2378 2526 0.975556 TATCAGGACTGGCCGCTTGA 60.976 55.000 0.00 2.55 43.43 3.02
2379 2527 0.531532 CTATCAGGACTGGCCGCTTG 60.532 60.000 0.00 0.00 43.43 4.01
2380 2528 1.690219 CCTATCAGGACTGGCCGCTT 61.690 60.000 0.00 0.00 43.43 4.68
2381 2529 2.136878 CCTATCAGGACTGGCCGCT 61.137 63.158 0.00 0.00 43.43 5.52
2382 2530 2.423446 CCTATCAGGACTGGCCGC 59.577 66.667 0.00 0.00 43.43 6.53
2383 2531 2.423446 GCCTATCAGGACTGGCCG 59.577 66.667 0.00 0.00 43.43 6.13
2385 2533 1.635817 TTGGGCCTATCAGGACTGGC 61.636 60.000 4.53 5.99 45.15 4.85
2386 2534 0.918983 TTTGGGCCTATCAGGACTGG 59.081 55.000 4.53 0.00 45.15 4.00
2387 2535 1.281867 TGTTTGGGCCTATCAGGACTG 59.718 52.381 4.53 0.00 45.15 3.51
2388 2536 1.561542 CTGTTTGGGCCTATCAGGACT 59.438 52.381 15.59 0.00 45.15 3.85
2389 2537 1.559682 TCTGTTTGGGCCTATCAGGAC 59.440 52.381 20.84 3.49 45.05 3.85
2390 2538 1.965414 TCTGTTTGGGCCTATCAGGA 58.035 50.000 20.84 9.13 37.67 3.86
2391 2539 2.648059 CTTCTGTTTGGGCCTATCAGG 58.352 52.381 20.84 6.95 38.80 3.86
2392 2540 2.239654 TCCTTCTGTTTGGGCCTATCAG 59.760 50.000 16.83 16.83 0.00 2.90
2393 2541 2.239654 CTCCTTCTGTTTGGGCCTATCA 59.760 50.000 4.53 1.27 0.00 2.15
2394 2542 2.505819 TCTCCTTCTGTTTGGGCCTATC 59.494 50.000 4.53 0.00 0.00 2.08
2395 2543 2.507471 CTCTCCTTCTGTTTGGGCCTAT 59.493 50.000 4.53 0.00 0.00 2.57
2396 2544 1.909302 CTCTCCTTCTGTTTGGGCCTA 59.091 52.381 4.53 0.00 0.00 3.93
2397 2545 0.695347 CTCTCCTTCTGTTTGGGCCT 59.305 55.000 4.53 0.00 0.00 5.19
2398 2546 0.693049 TCTCTCCTTCTGTTTGGGCC 59.307 55.000 0.00 0.00 0.00 5.80
2399 2547 2.568623 TTCTCTCCTTCTGTTTGGGC 57.431 50.000 0.00 0.00 0.00 5.36
2400 2548 4.464947 ACTTTTCTCTCCTTCTGTTTGGG 58.535 43.478 0.00 0.00 0.00 4.12
2401 2549 5.372373 AGACTTTTCTCTCCTTCTGTTTGG 58.628 41.667 0.00 0.00 0.00 3.28
2402 2550 6.538189 GAGACTTTTCTCTCCTTCTGTTTG 57.462 41.667 0.00 0.00 44.54 2.93
2413 2561 0.321996 GCGTGGGGAGACTTTTCTCT 59.678 55.000 1.86 0.00 46.80 3.10
2414 2562 0.321996 AGCGTGGGGAGACTTTTCTC 59.678 55.000 0.00 0.00 46.90 2.87
2415 2563 0.321996 GAGCGTGGGGAGACTTTTCT 59.678 55.000 0.00 0.00 33.37 2.52
2416 2564 0.673956 GGAGCGTGGGGAGACTTTTC 60.674 60.000 0.00 0.00 0.00 2.29
2417 2565 1.375326 GGAGCGTGGGGAGACTTTT 59.625 57.895 0.00 0.00 0.00 2.27
2418 2566 1.415672 TTGGAGCGTGGGGAGACTTT 61.416 55.000 0.00 0.00 0.00 2.66
2419 2567 1.841556 TTGGAGCGTGGGGAGACTT 60.842 57.895 0.00 0.00 0.00 3.01
2420 2568 2.203788 TTGGAGCGTGGGGAGACT 60.204 61.111 0.00 0.00 0.00 3.24
2421 2569 2.047179 GTTGGAGCGTGGGGAGAC 60.047 66.667 0.00 0.00 0.00 3.36
2422 2570 3.691342 CGTTGGAGCGTGGGGAGA 61.691 66.667 0.00 0.00 0.00 3.71
2479 2627 0.252193 TGGATTTTGGAAGCCTGGGG 60.252 55.000 0.00 0.00 41.92 4.96
2480 2628 1.188863 CTGGATTTTGGAAGCCTGGG 58.811 55.000 0.00 0.00 41.92 4.45
2481 2629 0.533951 GCTGGATTTTGGAAGCCTGG 59.466 55.000 0.00 0.00 41.92 4.45
2485 2633 1.617018 GGGGGCTGGATTTTGGAAGC 61.617 60.000 0.00 0.00 34.86 3.86
2486 2634 2.595558 GGGGGCTGGATTTTGGAAG 58.404 57.895 0.00 0.00 0.00 3.46
2487 2635 4.885709 GGGGGCTGGATTTTGGAA 57.114 55.556 0.00 0.00 0.00 3.53
2501 2649 2.176889 CCTACATACATACCTCGGGGG 58.823 57.143 6.13 0.00 41.89 5.40
2502 2650 1.549170 GCCTACATACATACCTCGGGG 59.451 57.143 0.00 0.00 38.88 5.73
2503 2651 2.526432 AGCCTACATACATACCTCGGG 58.474 52.381 0.00 0.00 0.00 5.14
2504 2652 6.260493 GTCTATAGCCTACATACATACCTCGG 59.740 46.154 0.00 0.00 0.00 4.63
2505 2653 6.260493 GGTCTATAGCCTACATACATACCTCG 59.740 46.154 0.00 0.00 0.00 4.63
2506 2654 7.571080 GGTCTATAGCCTACATACATACCTC 57.429 44.000 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.