Multiple sequence alignment - TraesCS3D01G100200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G100200 chr3D 100.000 2981 0 0 2092 5072 51788906 51785926 0.000000e+00 5505.0
1 TraesCS3D01G100200 chr3D 100.000 1653 0 0 1 1653 51790997 51789345 0.000000e+00 3053.0
2 TraesCS3D01G100200 chr3D 95.108 695 26 3 872 1561 52840256 52840947 0.000000e+00 1088.0
3 TraesCS3D01G100200 chr3D 80.511 744 72 35 3045 3772 52851951 52852637 2.110000e-138 503.0
4 TraesCS3D01G100200 chr3D 81.734 542 59 15 2144 2679 52840959 52841466 2.820000e-112 416.0
5 TraesCS3D01G100200 chr3D 76.798 737 127 26 2344 3063 71367532 71366823 1.720000e-99 374.0
6 TraesCS3D01G100200 chr3D 91.085 258 20 1 2696 2953 52851225 52851479 3.760000e-91 346.0
7 TraesCS3D01G100200 chr3D 81.194 335 42 8 4143 4462 53101991 53102319 3.030000e-62 250.0
8 TraesCS3D01G100200 chr3D 74.144 584 109 20 992 1566 68932164 68932714 2.390000e-48 204.0
9 TraesCS3D01G100200 chr3D 73.217 575 78 39 762 1282 71368701 71368149 6.850000e-29 139.0
10 TraesCS3D01G100200 chr3D 72.872 376 62 16 992 1356 69460132 69460478 5.410000e-15 93.5
11 TraesCS3D01G100200 chr3B 89.684 2404 165 33 2092 4436 82853573 82851194 0.000000e+00 2988.0
12 TraesCS3D01G100200 chr3B 87.931 1102 92 22 2092 3173 83271886 83272966 0.000000e+00 1260.0
13 TraesCS3D01G100200 chr3B 86.243 1054 105 16 631 1653 82854641 82853597 0.000000e+00 1107.0
14 TraesCS3D01G100200 chr3B 90.187 856 65 6 2532 3375 83469759 83468911 0.000000e+00 1098.0
15 TraesCS3D01G100200 chr3B 87.326 718 46 15 3874 4553 83272970 83273680 0.000000e+00 780.0
16 TraesCS3D01G100200 chr3B 83.994 706 87 16 883 1571 83470649 83469953 0.000000e+00 654.0
17 TraesCS3D01G100200 chr3B 86.447 546 71 2 1108 1653 83271320 83271862 3.380000e-166 595.0
18 TraesCS3D01G100200 chr3B 80.134 599 57 34 3073 3649 83512848 83513406 1.710000e-104 390.0
19 TraesCS3D01G100200 chr3B 84.824 369 29 11 4728 5072 82849731 82849366 3.760000e-91 346.0
20 TraesCS3D01G100200 chr3B 76.338 710 129 25 2333 3031 115236278 115236959 1.350000e-90 344.0
21 TraesCS3D01G100200 chr3B 93.617 188 12 0 2125 2312 83469958 83469771 1.080000e-71 281.0
22 TraesCS3D01G100200 chr3B 83.221 298 36 7 4143 4430 83515405 83515698 1.400000e-65 261.0
23 TraesCS3D01G100200 chr3B 88.889 117 12 1 4717 4832 201992953 201992837 5.290000e-30 143.0
24 TraesCS3D01G100200 chr3B 83.766 154 20 3 976 1126 145366064 145366215 1.900000e-29 141.0
25 TraesCS3D01G100200 chr3B 73.766 385 71 17 996 1380 115275982 115276336 1.920000e-24 124.0
26 TraesCS3D01G100200 chr3A 92.633 733 45 3 2708 3434 64317709 64316980 0.000000e+00 1046.0
27 TraesCS3D01G100200 chr3A 79.984 1234 127 40 2126 3344 64342970 64344098 0.000000e+00 800.0
28 TraesCS3D01G100200 chr3A 88.007 592 47 11 2144 2716 64318477 64317891 0.000000e+00 678.0
29 TraesCS3D01G100200 chr3A 83.266 741 82 10 872 1570 64319226 64318486 1.190000e-180 643.0
30 TraesCS3D01G100200 chr3A 85.602 507 63 6 969 1471 64340829 64341329 1.620000e-144 523.0
31 TraesCS3D01G100200 chr3A 82.759 609 51 24 3426 4004 64309468 64308884 1.270000e-135 494.0
32 TraesCS3D01G100200 chr3A 76.731 722 122 25 2344 3044 83394566 83395262 1.340000e-95 361.0
33 TraesCS3D01G100200 chr3A 77.814 622 110 18 2344 2953 80546065 80546670 4.830000e-95 359.0
34 TraesCS3D01G100200 chr3A 84.718 373 26 11 4728 5072 64308701 64308332 1.350000e-90 344.0
35 TraesCS3D01G100200 chr3A 85.714 266 25 11 3516 3772 64344850 64345111 8.370000e-68 268.0
36 TraesCS3D01G100200 chr3A 88.034 117 13 1 4717 4832 66044487 66044603 2.460000e-28 137.0
37 TraesCS3D01G100200 chr3A 72.750 400 66 17 992 1380 74218889 74219256 1.500000e-15 95.3
38 TraesCS3D01G100200 chr3A 94.737 57 3 0 4282 4338 64308871 64308815 6.990000e-14 89.8
39 TraesCS3D01G100200 chr3A 90.741 54 4 1 530 582 747398256 747398309 2.530000e-08 71.3
40 TraesCS3D01G100200 chr6D 84.066 546 41 16 5 507 44254081 44253539 7.630000e-133 484.0
41 TraesCS3D01G100200 chr6D 88.889 117 12 1 4717 4832 389705059 389704943 5.290000e-30 143.0
42 TraesCS3D01G100200 chr5A 81.818 539 48 29 12 507 529810606 529810075 1.700000e-109 407.0
43 TraesCS3D01G100200 chr2B 79.855 551 59 26 2 504 43221769 43222315 6.250000e-94 355.0
44 TraesCS3D01G100200 chr2B 78.879 535 48 32 1 477 125241795 125242322 8.250000e-78 302.0
45 TraesCS3D01G100200 chr6B 77.899 552 53 34 5 507 101697899 101697368 3.870000e-71 279.0
46 TraesCS3D01G100200 chr6B 82.090 201 20 15 13 203 351858473 351858279 1.890000e-34 158.0
47 TraesCS3D01G100200 chr7D 75.850 559 69 30 6 507 563894687 563895236 1.840000e-54 224.0
48 TraesCS3D01G100200 chr7D 86.260 131 14 3 4717 4846 60368358 60368231 6.850000e-29 139.0
49 TraesCS3D01G100200 chr2A 75.240 521 69 30 39 507 530571439 530571951 5.180000e-45 193.0
50 TraesCS3D01G100200 chr5D 74.401 543 79 34 15 505 170320958 170321492 1.450000e-40 178.0
51 TraesCS3D01G100200 chr5D 88.034 117 13 1 4717 4832 120783420 120783536 2.460000e-28 137.0
52 TraesCS3D01G100200 chr1A 87.692 130 13 3 4717 4845 539708905 539708778 1.140000e-31 148.0
53 TraesCS3D01G100200 chr7B 87.023 131 13 3 4717 4846 363222418 363222291 1.470000e-30 145.0
54 TraesCS3D01G100200 chr1D 87.023 131 14 3 4717 4846 175775771 175775643 1.470000e-30 145.0
55 TraesCS3D01G100200 chr1D 88.608 79 5 4 508 583 355089510 355089433 5.410000e-15 93.5
56 TraesCS3D01G100200 chr4D 85.926 135 5 6 379 507 450312406 450312280 1.150000e-26 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G100200 chr3D 51785926 51790997 5071 True 4279.000000 5505 100.000000 1 5072 2 chr3D.!!$R1 5071
1 TraesCS3D01G100200 chr3D 52840256 52841466 1210 False 752.000000 1088 88.421000 872 2679 2 chr3D.!!$F4 1807
2 TraesCS3D01G100200 chr3D 52851225 52852637 1412 False 424.500000 503 85.798000 2696 3772 2 chr3D.!!$F5 1076
3 TraesCS3D01G100200 chr3D 71366823 71368701 1878 True 256.500000 374 75.007500 762 3063 2 chr3D.!!$R2 2301
4 TraesCS3D01G100200 chr3D 68932164 68932714 550 False 204.000000 204 74.144000 992 1566 1 chr3D.!!$F2 574
5 TraesCS3D01G100200 chr3B 82849366 82854641 5275 True 1480.333333 2988 86.917000 631 5072 3 chr3B.!!$R2 4441
6 TraesCS3D01G100200 chr3B 83271320 83273680 2360 False 878.333333 1260 87.234667 1108 4553 3 chr3B.!!$F4 3445
7 TraesCS3D01G100200 chr3B 83468911 83470649 1738 True 677.666667 1098 89.266000 883 3375 3 chr3B.!!$R3 2492
8 TraesCS3D01G100200 chr3B 115236278 115236959 681 False 344.000000 344 76.338000 2333 3031 1 chr3B.!!$F1 698
9 TraesCS3D01G100200 chr3B 83512848 83515698 2850 False 325.500000 390 81.677500 3073 4430 2 chr3B.!!$F5 1357
10 TraesCS3D01G100200 chr3A 64316980 64319226 2246 True 789.000000 1046 87.968667 872 3434 3 chr3A.!!$R2 2562
11 TraesCS3D01G100200 chr3A 64340829 64345111 4282 False 530.333333 800 83.766667 969 3772 3 chr3A.!!$F6 2803
12 TraesCS3D01G100200 chr3A 83394566 83395262 696 False 361.000000 361 76.731000 2344 3044 1 chr3A.!!$F4 700
13 TraesCS3D01G100200 chr3A 80546065 80546670 605 False 359.000000 359 77.814000 2344 2953 1 chr3A.!!$F3 609
14 TraesCS3D01G100200 chr3A 64308332 64309468 1136 True 309.266667 494 87.404667 3426 5072 3 chr3A.!!$R1 1646
15 TraesCS3D01G100200 chr6D 44253539 44254081 542 True 484.000000 484 84.066000 5 507 1 chr6D.!!$R1 502
16 TraesCS3D01G100200 chr5A 529810075 529810606 531 True 407.000000 407 81.818000 12 507 1 chr5A.!!$R1 495
17 TraesCS3D01G100200 chr2B 43221769 43222315 546 False 355.000000 355 79.855000 2 504 1 chr2B.!!$F1 502
18 TraesCS3D01G100200 chr2B 125241795 125242322 527 False 302.000000 302 78.879000 1 477 1 chr2B.!!$F2 476
19 TraesCS3D01G100200 chr6B 101697368 101697899 531 True 279.000000 279 77.899000 5 507 1 chr6B.!!$R1 502
20 TraesCS3D01G100200 chr7D 563894687 563895236 549 False 224.000000 224 75.850000 6 507 1 chr7D.!!$F1 501

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
603 738 0.040942 CCCCCACCACATGATCCAAA 59.959 55.0 0.0 0.0 0.00 3.28 F
625 760 0.095417 GCGTTCGAGTCCAATGAAGC 59.905 55.0 0.0 0.0 0.00 3.86 F
842 984 0.252742 TTCTTCCTCCTCCCACTCCC 60.253 60.0 0.0 0.0 0.00 4.30 F
2313 4143 0.107703 GGCAAGGTCATCACCATCGA 60.108 55.0 0.0 0.0 46.68 3.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2312 4142 0.461693 GAGCTGGACATGGAGCTGTC 60.462 60.000 17.85 0.0 45.72 3.51 R
2313 4143 1.601171 GAGCTGGACATGGAGCTGT 59.399 57.895 17.85 0.0 45.72 4.40 R
2693 4596 0.676782 GCAGGTTGTAGCCGTGGATT 60.677 55.000 0.00 0.0 0.00 3.01 R
4182 8902 0.462225 CTCAGGAGAGCCAGTGCATG 60.462 60.000 0.00 0.0 41.13 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
255 347 6.698359 AGAAAAGCGCGCAATAAATAAAAA 57.302 29.167 35.10 0.00 0.00 1.94
368 495 0.608035 GGGTTGCAAGTTCGATCCCA 60.608 55.000 12.84 0.00 34.20 4.37
373 501 1.305930 GCAAGTTCGATCCCACACCC 61.306 60.000 0.00 0.00 0.00 4.61
375 503 0.324943 AAGTTCGATCCCACACCCAG 59.675 55.000 0.00 0.00 0.00 4.45
380 509 1.908483 GATCCCACACCCAGGTCTC 59.092 63.158 0.00 0.00 0.00 3.36
519 654 2.625314 GGAAATGCCTTCTAATCCTGGC 59.375 50.000 0.00 0.00 45.10 4.85
522 657 2.712984 GCCTTCTAATCCTGGCAGC 58.287 57.895 9.56 0.00 44.34 5.25
523 658 0.821301 GCCTTCTAATCCTGGCAGCC 60.821 60.000 9.56 3.66 44.34 4.85
524 659 0.533755 CCTTCTAATCCTGGCAGCCG 60.534 60.000 9.56 1.26 0.00 5.52
525 660 1.153168 TTCTAATCCTGGCAGCCGC 60.153 57.895 9.56 0.00 37.44 6.53
526 661 1.909459 TTCTAATCCTGGCAGCCGCA 61.909 55.000 9.56 0.00 41.24 5.69
527 662 1.890979 CTAATCCTGGCAGCCGCAG 60.891 63.158 9.56 0.00 41.24 5.18
528 663 2.599645 CTAATCCTGGCAGCCGCAGT 62.600 60.000 9.56 0.00 41.24 4.40
529 664 2.196997 TAATCCTGGCAGCCGCAGTT 62.197 55.000 9.56 2.08 41.24 3.16
530 665 3.984193 ATCCTGGCAGCCGCAGTTC 62.984 63.158 9.56 0.00 41.24 3.01
531 666 4.711949 CCTGGCAGCCGCAGTTCT 62.712 66.667 9.56 0.00 41.24 3.01
532 667 2.670934 CTGGCAGCCGCAGTTCTT 60.671 61.111 7.03 0.00 41.24 2.52
533 668 2.203337 TGGCAGCCGCAGTTCTTT 60.203 55.556 7.03 0.00 41.24 2.52
534 669 1.799258 CTGGCAGCCGCAGTTCTTTT 61.799 55.000 7.03 0.00 41.24 2.27
535 670 1.363807 GGCAGCCGCAGTTCTTTTT 59.636 52.632 0.00 0.00 41.24 1.94
570 705 4.694233 CACTGGCTGCTCCTGCGT 62.694 66.667 0.00 0.00 43.34 5.24
571 706 4.694233 ACTGGCTGCTCCTGCGTG 62.694 66.667 0.00 0.00 43.34 5.34
595 730 2.941025 CCCAGTCCCCCACCACAT 60.941 66.667 0.00 0.00 0.00 3.21
596 731 2.356278 CCAGTCCCCCACCACATG 59.644 66.667 0.00 0.00 0.00 3.21
597 732 2.230653 CCAGTCCCCCACCACATGA 61.231 63.158 0.00 0.00 0.00 3.07
598 733 1.574526 CCAGTCCCCCACCACATGAT 61.575 60.000 0.00 0.00 0.00 2.45
599 734 0.107017 CAGTCCCCCACCACATGATC 60.107 60.000 0.00 0.00 0.00 2.92
600 735 1.227383 GTCCCCCACCACATGATCC 59.773 63.158 0.00 0.00 0.00 3.36
601 736 1.230116 TCCCCCACCACATGATCCA 60.230 57.895 0.00 0.00 0.00 3.41
602 737 0.848648 TCCCCCACCACATGATCCAA 60.849 55.000 0.00 0.00 0.00 3.53
603 738 0.040942 CCCCCACCACATGATCCAAA 59.959 55.000 0.00 0.00 0.00 3.28
604 739 1.477553 CCCCACCACATGATCCAAAG 58.522 55.000 0.00 0.00 0.00 2.77
605 740 0.819582 CCCACCACATGATCCAAAGC 59.180 55.000 0.00 0.00 0.00 3.51
606 741 0.452987 CCACCACATGATCCAAAGCG 59.547 55.000 0.00 0.00 0.00 4.68
607 742 0.179156 CACCACATGATCCAAAGCGC 60.179 55.000 0.00 0.00 0.00 5.92
608 743 1.063006 CCACATGATCCAAAGCGCG 59.937 57.895 0.00 0.00 0.00 6.86
609 744 1.647545 CCACATGATCCAAAGCGCGT 61.648 55.000 8.43 0.00 0.00 6.01
610 745 0.168788 CACATGATCCAAAGCGCGTT 59.831 50.000 8.43 1.67 0.00 4.84
611 746 0.447801 ACATGATCCAAAGCGCGTTC 59.552 50.000 8.43 0.00 0.00 3.95
612 747 0.587242 CATGATCCAAAGCGCGTTCG 60.587 55.000 8.43 0.00 39.07 3.95
613 748 0.739462 ATGATCCAAAGCGCGTTCGA 60.739 50.000 8.43 5.60 38.10 3.71
614 749 1.345176 GATCCAAAGCGCGTTCGAG 59.655 57.895 8.43 0.00 38.10 4.04
615 750 1.352156 GATCCAAAGCGCGTTCGAGT 61.352 55.000 8.43 0.00 38.10 4.18
616 751 1.352156 ATCCAAAGCGCGTTCGAGTC 61.352 55.000 8.43 0.00 38.10 3.36
617 752 2.470286 CAAAGCGCGTTCGAGTCC 59.530 61.111 8.43 0.00 38.10 3.85
618 753 2.028484 AAAGCGCGTTCGAGTCCA 59.972 55.556 8.43 0.00 38.10 4.02
619 754 1.593209 AAAGCGCGTTCGAGTCCAA 60.593 52.632 8.43 0.00 38.10 3.53
620 755 0.949105 AAAGCGCGTTCGAGTCCAAT 60.949 50.000 8.43 0.00 38.10 3.16
621 756 1.626654 AAGCGCGTTCGAGTCCAATG 61.627 55.000 8.43 0.00 38.10 2.82
622 757 2.092291 GCGCGTTCGAGTCCAATGA 61.092 57.895 8.43 0.00 38.10 2.57
623 758 1.623081 GCGCGTTCGAGTCCAATGAA 61.623 55.000 8.43 0.00 38.10 2.57
624 759 0.366871 CGCGTTCGAGTCCAATGAAG 59.633 55.000 0.00 0.00 38.10 3.02
625 760 0.095417 GCGTTCGAGTCCAATGAAGC 59.905 55.000 0.00 0.00 0.00 3.86
626 761 1.714794 CGTTCGAGTCCAATGAAGCT 58.285 50.000 0.00 0.00 0.00 3.74
627 762 1.656095 CGTTCGAGTCCAATGAAGCTC 59.344 52.381 0.00 0.00 0.00 4.09
628 763 2.688507 GTTCGAGTCCAATGAAGCTCA 58.311 47.619 0.00 0.00 0.00 4.26
629 764 3.067106 GTTCGAGTCCAATGAAGCTCAA 58.933 45.455 0.00 0.00 0.00 3.02
665 800 0.984961 TGAGGAGGCCCAGAATCCAG 60.985 60.000 10.41 0.00 35.45 3.86
691 827 2.252072 TAGCCCTAGGGTTTGCAGCG 62.252 60.000 28.96 0.27 37.65 5.18
703 839 4.221422 GCAGCGGACGGGCAGATA 62.221 66.667 0.00 0.00 34.64 1.98
704 840 2.028190 CAGCGGACGGGCAGATAG 59.972 66.667 0.00 0.00 34.64 2.08
706 842 3.224324 GCGGACGGGCAGATAGGA 61.224 66.667 0.00 0.00 0.00 2.94
707 843 3.043419 CGGACGGGCAGATAGGAG 58.957 66.667 0.00 0.00 0.00 3.69
708 844 1.828660 CGGACGGGCAGATAGGAGT 60.829 63.158 0.00 0.00 0.00 3.85
757 893 3.067074 CCGTGTGGTGTGTTGTGTA 57.933 52.632 0.00 0.00 0.00 2.90
779 915 1.119684 GGAGAGAGAGGAAAGAGGCC 58.880 60.000 0.00 0.00 0.00 5.19
783 919 3.255831 AGAGAGAGGAAAGAGGCCTTTT 58.744 45.455 6.77 4.05 42.30 2.27
842 984 0.252742 TTCTTCCTCCTCCCACTCCC 60.253 60.000 0.00 0.00 0.00 4.30
849 991 3.775654 CTCCCACTCCCACTCCGC 61.776 72.222 0.00 0.00 0.00 5.54
850 992 4.316823 TCCCACTCCCACTCCGCT 62.317 66.667 0.00 0.00 0.00 5.52
919 1087 0.911769 TTGTCCATGAATCCGGCTCT 59.088 50.000 0.00 0.00 0.00 4.09
924 1092 1.579698 CATGAATCCGGCTCTGACTG 58.420 55.000 0.00 0.00 0.00 3.51
940 1108 1.205893 GACTGCGACCTGATTCTCCTT 59.794 52.381 0.00 0.00 0.00 3.36
983 1177 9.747898 ATAAATCTAAACAAATACCCTGTGTGA 57.252 29.630 0.00 0.00 0.00 3.58
984 1178 8.472007 AAATCTAAACAAATACCCTGTGTGAA 57.528 30.769 0.00 0.00 0.00 3.18
1182 1410 6.012658 TGTACATTCAAGAGGAATTTGCAC 57.987 37.500 0.00 0.00 43.76 4.57
1183 1411 4.164822 ACATTCAAGAGGAATTTGCACG 57.835 40.909 0.00 0.00 43.76 5.34
1184 1412 3.820467 ACATTCAAGAGGAATTTGCACGA 59.180 39.130 0.00 0.00 43.76 4.35
1307 1562 2.561037 GGGAACAACAAGGCACCCG 61.561 63.158 0.00 0.00 0.00 5.28
2267 4094 3.073735 CCGCTGCCTCTCCAGAGT 61.074 66.667 2.92 0.00 40.48 3.24
2281 4111 1.610673 AGAGTCACCACCGCCTGAT 60.611 57.895 0.00 0.00 0.00 2.90
2307 4137 3.134127 GCCCGGCAAGGTCATCAC 61.134 66.667 3.91 0.00 38.74 3.06
2310 4140 1.077501 CCGGCAAGGTCATCACCAT 60.078 57.895 0.00 0.00 46.68 3.55
2312 4142 1.431488 CGGCAAGGTCATCACCATCG 61.431 60.000 0.00 0.00 46.68 3.84
2313 4143 0.107703 GGCAAGGTCATCACCATCGA 60.108 55.000 0.00 0.00 46.68 3.59
2315 4145 1.675714 GCAAGGTCATCACCATCGACA 60.676 52.381 0.00 0.00 46.68 4.35
2318 4148 0.176680 GGTCATCACCATCGACAGCT 59.823 55.000 0.00 0.00 43.17 4.24
2319 4149 1.565305 GTCATCACCATCGACAGCTC 58.435 55.000 0.00 0.00 0.00 4.09
2321 4151 0.176449 CATCACCATCGACAGCTCCA 59.824 55.000 0.00 0.00 0.00 3.86
2322 4152 1.126488 ATCACCATCGACAGCTCCAT 58.874 50.000 0.00 0.00 0.00 3.41
2323 4153 0.176449 TCACCATCGACAGCTCCATG 59.824 55.000 0.00 0.00 0.00 3.66
2324 4154 0.107993 CACCATCGACAGCTCCATGT 60.108 55.000 0.00 0.00 35.68 3.21
2325 4155 0.176680 ACCATCGACAGCTCCATGTC 59.823 55.000 0.00 0.00 45.01 3.06
2327 4157 0.176449 CATCGACAGCTCCATGTCCA 59.824 55.000 0.00 0.00 45.56 4.02
2383 4250 0.618680 ACCTCTGGAGTGGCATGCTA 60.619 55.000 18.92 9.16 32.19 3.49
2399 4266 1.645704 GCTACTCTCCGACGTGCTCA 61.646 60.000 0.00 0.00 0.00 4.26
2405 4278 4.363990 CCGACGTGCTCACTGCCT 62.364 66.667 0.00 0.00 42.00 4.75
2548 4430 1.176527 CCGGCATCATCAGGTTTGTT 58.823 50.000 0.00 0.00 0.00 2.83
2631 4519 4.410400 GTGGACCTTGGAGGGGCG 62.410 72.222 0.00 0.00 40.58 6.13
2638 4526 3.406595 CTTGGAGGGGCGGGCTTAG 62.407 68.421 0.26 0.00 0.00 2.18
2693 4596 5.296151 AGCATGAGATAAATTCCCGAGAA 57.704 39.130 0.00 0.00 36.15 2.87
2854 4959 2.398252 CAGAAGAAGCTGCTGGATGA 57.602 50.000 1.35 0.00 33.65 2.92
3032 5563 3.578282 TCGATGTATACCATGGCATGAGT 59.422 43.478 28.43 23.63 32.56 3.41
3292 5838 4.813750 AAATGAGAAGGGCAAGGATTTG 57.186 40.909 0.00 0.00 37.36 2.32
3315 5861 7.357951 TGTTTTTCACAACAAAATCTGTTCC 57.642 32.000 0.00 0.00 45.50 3.62
3345 5895 2.227626 GCAGTTTCAAAGGAGAAGGAGC 59.772 50.000 0.00 0.00 0.00 4.70
3353 5903 5.678583 TCAAAGGAGAAGGAGCATATGAAG 58.321 41.667 6.97 0.00 0.00 3.02
3402 5952 2.675772 GCAAGAAGCAGCCTGCCT 60.676 61.111 14.25 0.00 46.52 4.75
3522 6684 5.189736 AGTGCCCTTTGAGATGACTACAATA 59.810 40.000 0.00 0.00 0.00 1.90
3570 6733 1.230783 CCATGCCATCCCACCATCA 59.769 57.895 0.00 0.00 0.00 3.07
3635 6802 5.424252 TGATGGAGGTTAAATTAGGAGACGT 59.576 40.000 0.00 0.00 0.00 4.34
3806 8457 5.449862 GGTTATTATGAATGTTTCGGCTGCA 60.450 40.000 0.50 0.00 0.00 4.41
3813 8464 3.598019 ATGTTTCGGCTGCATTTTGAT 57.402 38.095 0.50 0.00 0.00 2.57
4052 8740 3.074369 CCACCCGGGGGCAAATTC 61.074 66.667 27.92 0.00 39.32 2.17
4053 8741 3.448340 CACCCGGGGGCAAATTCG 61.448 66.667 27.92 0.00 39.32 3.34
4055 8743 2.678580 CCCGGGGGCAAATTCGTT 60.679 61.111 14.71 0.00 0.00 3.85
4182 8902 1.446099 TCGAGGTGATGAGCGCAAC 60.446 57.895 11.47 3.52 0.00 4.17
4200 8920 1.196766 ACATGCACTGGCTCTCCTGA 61.197 55.000 0.00 0.00 41.91 3.86
4376 9109 3.368323 GGTGGGTGCCAGAATTTATTGTG 60.368 47.826 0.00 0.00 32.34 3.33
4470 10619 5.397142 AGAGATGCAATGCAGATACGATA 57.603 39.130 14.98 0.00 43.65 2.92
4487 10636 9.204570 AGATACGATAAATTTGTACAGTATGGC 57.795 33.333 0.00 0.00 43.62 4.40
4488 10637 8.896320 ATACGATAAATTTGTACAGTATGGCA 57.104 30.769 0.00 0.00 43.62 4.92
4489 10638 7.011828 ACGATAAATTTGTACAGTATGGCAC 57.988 36.000 0.00 0.00 43.62 5.01
4490 10639 6.126741 CGATAAATTTGTACAGTATGGCACG 58.873 40.000 0.00 0.00 43.62 5.34
4491 10640 3.757745 AATTTGTACAGTATGGCACGC 57.242 42.857 0.00 0.00 43.62 5.34
4492 10641 2.465860 TTTGTACAGTATGGCACGCT 57.534 45.000 0.00 0.00 43.62 5.07
4493 10642 3.596310 TTTGTACAGTATGGCACGCTA 57.404 42.857 0.00 0.00 43.62 4.26
4494 10643 2.863401 TGTACAGTATGGCACGCTAG 57.137 50.000 0.00 0.00 43.62 3.42
4495 10644 1.407618 TGTACAGTATGGCACGCTAGG 59.592 52.381 0.00 0.00 43.62 3.02
4496 10645 1.407979 GTACAGTATGGCACGCTAGGT 59.592 52.381 0.00 0.00 43.62 3.08
4497 10646 0.902531 ACAGTATGGCACGCTAGGTT 59.097 50.000 0.00 0.00 43.62 3.50
4498 10647 1.278127 ACAGTATGGCACGCTAGGTTT 59.722 47.619 0.00 0.00 43.62 3.27
4499 10648 2.498481 ACAGTATGGCACGCTAGGTTTA 59.502 45.455 0.00 0.00 43.62 2.01
4500 10649 3.123804 CAGTATGGCACGCTAGGTTTAG 58.876 50.000 0.00 0.00 0.00 1.85
4501 10650 2.764572 AGTATGGCACGCTAGGTTTAGT 59.235 45.455 0.00 0.00 0.00 2.24
4502 10651 2.781681 ATGGCACGCTAGGTTTAGTT 57.218 45.000 0.00 0.00 0.00 2.24
4503 10652 1.803334 TGGCACGCTAGGTTTAGTTG 58.197 50.000 0.00 0.00 0.00 3.16
4504 10653 0.446616 GGCACGCTAGGTTTAGTTGC 59.553 55.000 0.00 0.00 37.34 4.17
4509 10658 2.011540 GCTAGGTTTAGTTGCGAGCT 57.988 50.000 0.00 0.00 0.00 4.09
4510 10659 1.661112 GCTAGGTTTAGTTGCGAGCTG 59.339 52.381 0.00 0.00 0.00 4.24
4511 10660 2.931320 GCTAGGTTTAGTTGCGAGCTGT 60.931 50.000 0.00 0.00 0.00 4.40
4512 10661 2.256117 AGGTTTAGTTGCGAGCTGTT 57.744 45.000 0.00 0.00 0.00 3.16
4513 10662 1.873591 AGGTTTAGTTGCGAGCTGTTG 59.126 47.619 0.00 0.00 0.00 3.33
4514 10663 1.871039 GGTTTAGTTGCGAGCTGTTGA 59.129 47.619 0.00 0.00 0.00 3.18
4515 10664 2.289547 GGTTTAGTTGCGAGCTGTTGAA 59.710 45.455 0.00 0.00 0.00 2.69
4516 10665 3.545633 GTTTAGTTGCGAGCTGTTGAAG 58.454 45.455 0.00 0.00 0.00 3.02
4517 10666 1.795768 TAGTTGCGAGCTGTTGAAGG 58.204 50.000 0.00 0.00 0.00 3.46
4518 10667 0.179045 AGTTGCGAGCTGTTGAAGGT 60.179 50.000 0.00 0.00 40.07 3.50
4519 10668 0.040958 GTTGCGAGCTGTTGAAGGTG 60.041 55.000 0.00 0.00 36.52 4.00
4520 10669 0.179059 TTGCGAGCTGTTGAAGGTGA 60.179 50.000 0.00 0.00 36.52 4.02
4521 10670 0.179059 TGCGAGCTGTTGAAGGTGAA 60.179 50.000 0.00 0.00 36.52 3.18
4522 10671 1.160137 GCGAGCTGTTGAAGGTGAAT 58.840 50.000 0.00 0.00 36.52 2.57
4523 10672 2.289382 TGCGAGCTGTTGAAGGTGAATA 60.289 45.455 0.00 0.00 36.52 1.75
4524 10673 2.094417 GCGAGCTGTTGAAGGTGAATAC 59.906 50.000 0.00 0.00 36.52 1.89
4525 10674 2.345641 CGAGCTGTTGAAGGTGAATACG 59.654 50.000 0.00 0.00 36.52 3.06
4526 10675 3.585862 GAGCTGTTGAAGGTGAATACGA 58.414 45.455 0.00 0.00 36.52 3.43
4527 10676 4.184629 GAGCTGTTGAAGGTGAATACGAT 58.815 43.478 0.00 0.00 36.52 3.73
4528 10677 3.935203 AGCTGTTGAAGGTGAATACGATG 59.065 43.478 0.00 0.00 34.56 3.84
4529 10678 3.063997 GCTGTTGAAGGTGAATACGATGG 59.936 47.826 0.00 0.00 0.00 3.51
4530 10679 4.253685 CTGTTGAAGGTGAATACGATGGT 58.746 43.478 0.00 0.00 0.00 3.55
4531 10680 4.000325 TGTTGAAGGTGAATACGATGGTG 59.000 43.478 0.00 0.00 0.00 4.17
4532 10681 3.260475 TGAAGGTGAATACGATGGTGG 57.740 47.619 0.00 0.00 0.00 4.61
4533 10682 2.569853 TGAAGGTGAATACGATGGTGGT 59.430 45.455 0.00 0.00 0.00 4.16
4534 10683 2.981859 AGGTGAATACGATGGTGGTC 57.018 50.000 0.00 0.00 0.00 4.02
4535 10684 2.184533 AGGTGAATACGATGGTGGTCA 58.815 47.619 0.00 0.00 0.00 4.02
4536 10685 2.569853 AGGTGAATACGATGGTGGTCAA 59.430 45.455 0.00 0.00 0.00 3.18
4537 10686 3.008594 AGGTGAATACGATGGTGGTCAAA 59.991 43.478 0.00 0.00 0.00 2.69
4538 10687 3.374058 GGTGAATACGATGGTGGTCAAAG 59.626 47.826 0.00 0.00 0.00 2.77
4539 10688 4.250464 GTGAATACGATGGTGGTCAAAGA 58.750 43.478 0.00 0.00 0.00 2.52
4540 10689 4.693566 GTGAATACGATGGTGGTCAAAGAA 59.306 41.667 0.00 0.00 0.00 2.52
4541 10690 5.180492 GTGAATACGATGGTGGTCAAAGAAA 59.820 40.000 0.00 0.00 0.00 2.52
4542 10691 5.943416 TGAATACGATGGTGGTCAAAGAAAT 59.057 36.000 0.00 0.00 0.00 2.17
4543 10692 7.065324 GTGAATACGATGGTGGTCAAAGAAATA 59.935 37.037 0.00 0.00 0.00 1.40
4544 10693 7.608376 TGAATACGATGGTGGTCAAAGAAATAA 59.392 33.333 0.00 0.00 0.00 1.40
4545 10694 8.519799 AATACGATGGTGGTCAAAGAAATAAT 57.480 30.769 0.00 0.00 0.00 1.28
4546 10695 9.621629 AATACGATGGTGGTCAAAGAAATAATA 57.378 29.630 0.00 0.00 0.00 0.98
4547 10696 9.793259 ATACGATGGTGGTCAAAGAAATAATAT 57.207 29.630 0.00 0.00 0.00 1.28
4549 10698 9.621629 ACGATGGTGGTCAAAGAAATAATATAA 57.378 29.630 0.00 0.00 0.00 0.98
4550 10699 9.878599 CGATGGTGGTCAAAGAAATAATATAAC 57.121 33.333 0.00 0.00 0.00 1.89
4551 10700 9.878599 GATGGTGGTCAAAGAAATAATATAACG 57.121 33.333 0.00 0.00 0.00 3.18
4552 10701 9.621629 ATGGTGGTCAAAGAAATAATATAACGA 57.378 29.630 0.00 0.00 0.00 3.85
4553 10702 9.451002 TGGTGGTCAAAGAAATAATATAACGAA 57.549 29.630 0.00 0.00 0.00 3.85
4554 10703 9.931210 GGTGGTCAAAGAAATAATATAACGAAG 57.069 33.333 0.00 0.00 0.00 3.79
4562 10711 9.886132 AAGAAATAATATAACGAAGTCCTGTGT 57.114 29.630 0.00 0.00 45.00 3.72
4563 10712 9.886132 AGAAATAATATAACGAAGTCCTGTGTT 57.114 29.630 0.00 0.00 45.00 3.32
4568 10717 8.475331 AATATAACGAAGTCCTGTGTTAGTTG 57.525 34.615 0.00 0.00 45.00 3.16
4569 10718 2.480845 ACGAAGTCCTGTGTTAGTTGC 58.519 47.619 0.00 0.00 29.74 4.17
4570 10719 1.455786 CGAAGTCCTGTGTTAGTTGCG 59.544 52.381 0.00 0.00 0.00 4.85
4571 10720 2.750948 GAAGTCCTGTGTTAGTTGCGA 58.249 47.619 0.00 0.00 0.00 5.10
4572 10721 2.440539 AGTCCTGTGTTAGTTGCGAG 57.559 50.000 0.00 0.00 0.00 5.03
4573 10722 0.790814 GTCCTGTGTTAGTTGCGAGC 59.209 55.000 0.00 0.00 0.00 5.03
4574 10723 0.679505 TCCTGTGTTAGTTGCGAGCT 59.320 50.000 0.00 0.00 0.00 4.09
4575 10724 0.792640 CCTGTGTTAGTTGCGAGCTG 59.207 55.000 0.00 0.00 0.00 4.24
4576 10725 1.502231 CTGTGTTAGTTGCGAGCTGT 58.498 50.000 0.00 0.00 0.00 4.40
4577 10726 1.867233 CTGTGTTAGTTGCGAGCTGTT 59.133 47.619 0.00 0.00 0.00 3.16
4578 10727 1.597195 TGTGTTAGTTGCGAGCTGTTG 59.403 47.619 0.00 0.00 0.00 3.33
4579 10728 1.864711 GTGTTAGTTGCGAGCTGTTGA 59.135 47.619 0.00 0.00 0.00 3.18
4580 10729 2.096713 GTGTTAGTTGCGAGCTGTTGAG 60.097 50.000 0.00 0.00 0.00 3.02
4581 10730 1.461127 GTTAGTTGCGAGCTGTTGAGG 59.539 52.381 0.00 0.00 0.00 3.86
4582 10731 0.679505 TAGTTGCGAGCTGTTGAGGT 59.320 50.000 0.00 0.00 0.00 3.85
4583 10732 0.882042 AGTTGCGAGCTGTTGAGGTG 60.882 55.000 0.00 0.00 0.00 4.00
4584 10733 0.880278 GTTGCGAGCTGTTGAGGTGA 60.880 55.000 0.00 0.00 0.00 4.02
4585 10734 0.179059 TTGCGAGCTGTTGAGGTGAA 60.179 50.000 0.00 0.00 0.00 3.18
4586 10735 0.035317 TGCGAGCTGTTGAGGTGAAT 59.965 50.000 0.00 0.00 0.00 2.57
4587 10736 1.275010 TGCGAGCTGTTGAGGTGAATA 59.725 47.619 0.00 0.00 0.00 1.75
4588 10737 1.661112 GCGAGCTGTTGAGGTGAATAC 59.339 52.381 0.00 0.00 0.00 1.89
4589 10738 1.920574 CGAGCTGTTGAGGTGAATACG 59.079 52.381 0.00 0.00 0.00 3.06
4590 10739 2.415491 CGAGCTGTTGAGGTGAATACGA 60.415 50.000 0.00 0.00 0.00 3.43
4591 10740 3.735208 CGAGCTGTTGAGGTGAATACGAT 60.735 47.826 0.00 0.00 0.00 3.73
4592 10741 3.525537 AGCTGTTGAGGTGAATACGATG 58.474 45.455 0.00 0.00 0.00 3.84
4593 10742 3.055819 AGCTGTTGAGGTGAATACGATGT 60.056 43.478 0.00 0.00 0.00 3.06
4594 10743 3.062639 GCTGTTGAGGTGAATACGATGTG 59.937 47.826 0.00 0.00 0.00 3.21
4595 10744 4.494484 CTGTTGAGGTGAATACGATGTGA 58.506 43.478 0.00 0.00 0.00 3.58
4596 10745 4.494484 TGTTGAGGTGAATACGATGTGAG 58.506 43.478 0.00 0.00 0.00 3.51
4597 10746 4.219725 TGTTGAGGTGAATACGATGTGAGA 59.780 41.667 0.00 0.00 0.00 3.27
4598 10747 4.371855 TGAGGTGAATACGATGTGAGAC 57.628 45.455 0.00 0.00 0.00 3.36
4599 10748 4.017126 TGAGGTGAATACGATGTGAGACT 58.983 43.478 0.00 0.00 0.00 3.24
4600 10749 4.462834 TGAGGTGAATACGATGTGAGACTT 59.537 41.667 0.00 0.00 0.00 3.01
4601 10750 4.748892 AGGTGAATACGATGTGAGACTTG 58.251 43.478 0.00 0.00 0.00 3.16
4602 10751 4.462834 AGGTGAATACGATGTGAGACTTGA 59.537 41.667 0.00 0.00 0.00 3.02
4603 10752 4.800993 GGTGAATACGATGTGAGACTTGAG 59.199 45.833 0.00 0.00 0.00 3.02
4604 10753 5.393135 GGTGAATACGATGTGAGACTTGAGA 60.393 44.000 0.00 0.00 0.00 3.27
4605 10754 6.093404 GTGAATACGATGTGAGACTTGAGAA 58.907 40.000 0.00 0.00 0.00 2.87
4606 10755 6.586463 GTGAATACGATGTGAGACTTGAGAAA 59.414 38.462 0.00 0.00 0.00 2.52
4607 10756 6.808704 TGAATACGATGTGAGACTTGAGAAAG 59.191 38.462 0.00 0.00 0.00 2.62
4608 10757 3.919216 ACGATGTGAGACTTGAGAAAGG 58.081 45.455 0.00 0.00 0.00 3.11
4609 10758 3.322254 ACGATGTGAGACTTGAGAAAGGT 59.678 43.478 0.00 0.00 0.00 3.50
4610 10759 3.677121 CGATGTGAGACTTGAGAAAGGTG 59.323 47.826 0.00 0.00 0.00 4.00
4611 10760 4.559502 CGATGTGAGACTTGAGAAAGGTGA 60.560 45.833 0.00 0.00 0.00 4.02
4612 10761 4.753516 TGTGAGACTTGAGAAAGGTGAA 57.246 40.909 0.00 0.00 0.00 3.18
4613 10762 4.442706 TGTGAGACTTGAGAAAGGTGAAC 58.557 43.478 0.00 0.00 0.00 3.18
4614 10763 4.081142 TGTGAGACTTGAGAAAGGTGAACA 60.081 41.667 0.00 0.00 0.00 3.18
4615 10764 4.509600 GTGAGACTTGAGAAAGGTGAACAG 59.490 45.833 0.00 0.00 0.00 3.16
4616 10765 4.061596 GAGACTTGAGAAAGGTGAACAGG 58.938 47.826 0.00 0.00 0.00 4.00
4617 10766 3.711704 AGACTTGAGAAAGGTGAACAGGA 59.288 43.478 0.00 0.00 0.00 3.86
4618 10767 3.809905 ACTTGAGAAAGGTGAACAGGAC 58.190 45.455 0.00 0.00 0.00 3.85
4619 10768 3.456277 ACTTGAGAAAGGTGAACAGGACT 59.544 43.478 0.00 0.00 0.00 3.85
4620 10769 3.475566 TGAGAAAGGTGAACAGGACTG 57.524 47.619 0.00 0.00 0.00 3.51
4621 10770 2.104792 TGAGAAAGGTGAACAGGACTGG 59.895 50.000 4.14 0.00 34.19 4.00
4622 10771 1.202818 AGAAAGGTGAACAGGACTGGC 60.203 52.381 4.14 0.00 34.19 4.85
4623 10772 0.535102 AAAGGTGAACAGGACTGGCG 60.535 55.000 4.14 0.00 34.19 5.69
4624 10773 1.696097 AAGGTGAACAGGACTGGCGT 61.696 55.000 4.14 0.00 34.19 5.68
4625 10774 0.830444 AGGTGAACAGGACTGGCGTA 60.830 55.000 4.14 0.00 34.19 4.42
4626 10775 0.389948 GGTGAACAGGACTGGCGTAG 60.390 60.000 4.14 0.00 34.19 3.51
4627 10776 0.601558 GTGAACAGGACTGGCGTAGA 59.398 55.000 4.14 0.00 34.19 2.59
4628 10777 0.888619 TGAACAGGACTGGCGTAGAG 59.111 55.000 4.14 0.00 34.19 2.43
4629 10778 0.889306 GAACAGGACTGGCGTAGAGT 59.111 55.000 4.14 0.00 34.19 3.24
4630 10779 2.089980 GAACAGGACTGGCGTAGAGTA 58.910 52.381 4.14 0.00 34.19 2.59
4631 10780 1.461559 ACAGGACTGGCGTAGAGTAC 58.538 55.000 4.14 0.00 34.19 2.73
4632 10781 0.739561 CAGGACTGGCGTAGAGTACC 59.260 60.000 0.00 0.00 0.00 3.34
4633 10782 0.624785 AGGACTGGCGTAGAGTACCT 59.375 55.000 0.00 0.00 0.00 3.08
4634 10783 1.005687 AGGACTGGCGTAGAGTACCTT 59.994 52.381 0.00 0.00 0.00 3.50
4635 10784 1.823610 GGACTGGCGTAGAGTACCTTT 59.176 52.381 0.00 0.00 0.00 3.11
4636 10785 3.019564 GGACTGGCGTAGAGTACCTTTA 58.980 50.000 0.00 0.00 0.00 1.85
4637 10786 3.181492 GGACTGGCGTAGAGTACCTTTAC 60.181 52.174 0.00 0.00 0.00 2.01
4638 10787 3.424703 ACTGGCGTAGAGTACCTTTACA 58.575 45.455 0.00 0.00 0.00 2.41
4639 10788 3.828451 ACTGGCGTAGAGTACCTTTACAA 59.172 43.478 0.00 0.00 0.00 2.41
4640 10789 4.281688 ACTGGCGTAGAGTACCTTTACAAA 59.718 41.667 0.00 0.00 0.00 2.83
4641 10790 5.046807 ACTGGCGTAGAGTACCTTTACAAAT 60.047 40.000 0.00 0.00 0.00 2.32
4642 10791 5.797051 TGGCGTAGAGTACCTTTACAAATT 58.203 37.500 0.00 0.00 0.00 1.82
4643 10792 6.934056 TGGCGTAGAGTACCTTTACAAATTA 58.066 36.000 0.00 0.00 0.00 1.40
4644 10793 7.037438 TGGCGTAGAGTACCTTTACAAATTAG 58.963 38.462 0.00 0.00 0.00 1.73
4645 10794 7.038048 GGCGTAGAGTACCTTTACAAATTAGT 58.962 38.462 0.00 0.00 0.00 2.24
4646 10795 7.547019 GGCGTAGAGTACCTTTACAAATTAGTT 59.453 37.037 0.00 0.00 0.00 2.24
4647 10796 9.573133 GCGTAGAGTACCTTTACAAATTAGTTA 57.427 33.333 0.00 0.00 0.00 2.24
4660 10809 7.406799 ACAAATTAGTTACAAATGCAAGTGC 57.593 32.000 0.00 0.00 42.50 4.40
4670 10819 3.256936 GCAAGTGCATGTCGAGCA 58.743 55.556 0.00 0.00 41.59 4.26
4671 10820 1.134075 GCAAGTGCATGTCGAGCAG 59.866 57.895 0.00 0.00 43.63 4.24
4672 10821 1.792301 CAAGTGCATGTCGAGCAGG 59.208 57.895 0.00 0.00 43.63 4.85
4678 10827 2.291843 CATGTCGAGCAGGCTAACG 58.708 57.895 0.00 0.00 0.00 3.18
4679 10828 0.179137 CATGTCGAGCAGGCTAACGA 60.179 55.000 0.00 0.00 0.00 3.85
4680 10829 0.530744 ATGTCGAGCAGGCTAACGAA 59.469 50.000 6.64 0.16 36.57 3.85
4681 10830 0.109272 TGTCGAGCAGGCTAACGAAG 60.109 55.000 6.64 0.00 36.57 3.79
4683 10832 0.170561 TCGAGCAGGCTAACGAAGTC 59.829 55.000 3.02 0.00 45.00 3.01
4684 10833 0.802607 CGAGCAGGCTAACGAAGTCC 60.803 60.000 0.00 0.00 45.00 3.85
4685 10834 0.460459 GAGCAGGCTAACGAAGTCCC 60.460 60.000 0.00 0.00 45.00 4.46
4686 10835 0.905337 AGCAGGCTAACGAAGTCCCT 60.905 55.000 0.00 0.00 45.00 4.20
4687 10836 0.036294 GCAGGCTAACGAAGTCCCTT 60.036 55.000 0.00 0.00 45.00 3.95
4688 10837 1.610886 GCAGGCTAACGAAGTCCCTTT 60.611 52.381 0.00 0.00 45.00 3.11
4689 10838 2.076863 CAGGCTAACGAAGTCCCTTTG 58.923 52.381 0.00 0.00 45.00 2.77
4690 10839 1.697982 AGGCTAACGAAGTCCCTTTGT 59.302 47.619 0.00 0.00 45.00 2.83
4691 10840 2.901839 AGGCTAACGAAGTCCCTTTGTA 59.098 45.455 0.00 0.00 45.00 2.41
4692 10841 2.998670 GGCTAACGAAGTCCCTTTGTAC 59.001 50.000 0.00 0.00 45.00 2.90
4693 10842 3.555586 GGCTAACGAAGTCCCTTTGTACA 60.556 47.826 0.00 0.00 45.00 2.90
4694 10843 3.431233 GCTAACGAAGTCCCTTTGTACAC 59.569 47.826 0.00 0.00 45.00 2.90
4695 10844 3.832615 AACGAAGTCCCTTTGTACACT 57.167 42.857 0.00 0.00 45.00 3.55
4696 10845 4.942761 AACGAAGTCCCTTTGTACACTA 57.057 40.909 0.00 0.00 45.00 2.74
4697 10846 4.942761 ACGAAGTCCCTTTGTACACTAA 57.057 40.909 0.00 0.00 29.74 2.24
4698 10847 4.625028 ACGAAGTCCCTTTGTACACTAAC 58.375 43.478 0.00 0.00 29.74 2.34
4699 10848 4.099881 ACGAAGTCCCTTTGTACACTAACA 59.900 41.667 0.00 0.00 29.74 2.41
4700 10849 4.684703 CGAAGTCCCTTTGTACACTAACAG 59.315 45.833 0.00 0.00 0.00 3.16
4701 10850 5.508489 CGAAGTCCCTTTGTACACTAACAGA 60.508 44.000 0.00 0.00 0.00 3.41
4702 10851 5.881923 AGTCCCTTTGTACACTAACAGAA 57.118 39.130 0.00 0.00 0.00 3.02
4703 10852 5.855045 AGTCCCTTTGTACACTAACAGAAG 58.145 41.667 0.00 0.00 0.00 2.85
4704 10853 5.601313 AGTCCCTTTGTACACTAACAGAAGA 59.399 40.000 0.00 0.00 0.00 2.87
4705 10854 5.927115 GTCCCTTTGTACACTAACAGAAGAG 59.073 44.000 0.00 0.00 0.00 2.85
4706 10855 4.691216 CCCTTTGTACACTAACAGAAGAGC 59.309 45.833 0.00 0.00 0.00 4.09
4707 10856 4.691216 CCTTTGTACACTAACAGAAGAGCC 59.309 45.833 0.00 0.00 0.00 4.70
4708 10857 3.955650 TGTACACTAACAGAAGAGCCC 57.044 47.619 0.00 0.00 0.00 5.19
4709 10858 3.507411 TGTACACTAACAGAAGAGCCCT 58.493 45.455 0.00 0.00 0.00 5.19
4710 10859 3.901844 TGTACACTAACAGAAGAGCCCTT 59.098 43.478 0.00 0.00 34.81 3.95
4719 10868 2.935481 GAAGAGCCCTTCATGCTTTG 57.065 50.000 2.64 0.00 46.18 2.77
4720 10869 2.165998 GAAGAGCCCTTCATGCTTTGT 58.834 47.619 2.64 0.00 46.18 2.83
4721 10870 1.831580 AGAGCCCTTCATGCTTTGTC 58.168 50.000 0.00 0.00 39.69 3.18
4722 10871 1.074405 AGAGCCCTTCATGCTTTGTCA 59.926 47.619 0.00 0.00 39.69 3.58
4723 10872 1.471684 GAGCCCTTCATGCTTTGTCAG 59.528 52.381 0.00 0.00 39.69 3.51
4724 10873 1.074405 AGCCCTTCATGCTTTGTCAGA 59.926 47.619 0.00 0.00 34.87 3.27
4725 10874 1.200948 GCCCTTCATGCTTTGTCAGAC 59.799 52.381 0.00 0.00 0.00 3.51
4726 10875 2.507484 CCCTTCATGCTTTGTCAGACA 58.493 47.619 0.00 0.00 0.00 3.41
4740 10889 1.344438 TCAGACAGCTCGTTTGATGGT 59.656 47.619 5.73 0.00 33.98 3.55
4765 10914 5.127682 TGTGTGCATCTTAGCTATTCTGAGA 59.872 40.000 0.00 0.00 41.02 3.27
4784 10933 1.661112 GACAGGTGTCGCTCTTTATGC 59.339 52.381 0.00 0.00 35.12 3.14
4793 10942 5.292101 GTGTCGCTCTTTATGCTTTGTATCT 59.708 40.000 0.00 0.00 0.00 1.98
4795 10944 5.292101 GTCGCTCTTTATGCTTTGTATCTGT 59.708 40.000 0.00 0.00 0.00 3.41
4835 10984 9.691362 TTGAGTTAATAAAAGCATCCTTTGTTC 57.309 29.630 0.00 0.00 40.30 3.18
4836 10985 8.855110 TGAGTTAATAAAAGCATCCTTTGTTCA 58.145 29.630 0.00 0.00 40.30 3.18
4838 10987 9.696917 AGTTAATAAAAGCATCCTTTGTTCAAG 57.303 29.630 0.00 0.00 40.30 3.02
4842 10991 9.612066 AATAAAAGCATCCTTTGTTCAAGAAAA 57.388 25.926 0.00 0.00 40.30 2.29
4909 11065 1.182667 GGCCTCCCTTGCGTTAATTT 58.817 50.000 0.00 0.00 0.00 1.82
4912 11068 3.383505 GGCCTCCCTTGCGTTAATTTAAT 59.616 43.478 0.00 0.00 0.00 1.40
4961 11125 5.286082 GTGCGACTATTAAAACCAGCAAATG 59.714 40.000 0.00 0.00 35.05 2.32
4991 11164 2.431782 ACACAGCTTTCATGGTGCTTTT 59.568 40.909 5.51 0.00 38.84 2.27
4998 11171 2.530460 TCATGGTGCTTTTGGGCTAT 57.470 45.000 0.00 0.00 0.00 2.97
5010 11191 6.267242 TGCTTTTGGGCTATTATCATATTGCA 59.733 34.615 0.00 0.00 0.00 4.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
223 314 5.533533 TTGCGCGCTTTTCTAAATTACTA 57.466 34.783 33.29 1.95 0.00 1.82
226 317 7.979115 ATTTATTGCGCGCTTTTCTAAATTA 57.021 28.000 33.29 12.36 0.00 1.40
255 347 9.294614 AGCTCAGTTTATTCTTCTTCTCATTTT 57.705 29.630 0.00 0.00 0.00 1.82
259 351 6.997655 TCAGCTCAGTTTATTCTTCTTCTCA 58.002 36.000 0.00 0.00 0.00 3.27
260 352 7.816995 TCTTCAGCTCAGTTTATTCTTCTTCTC 59.183 37.037 0.00 0.00 0.00 2.87
265 371 6.366332 TCGTTCTTCAGCTCAGTTTATTCTTC 59.634 38.462 0.00 0.00 0.00 2.87
276 382 7.441157 TCTCTTTTTATTTCGTTCTTCAGCTCA 59.559 33.333 0.00 0.00 0.00 4.26
368 495 2.932261 GTCAAAAAGAGACCTGGGTGT 58.068 47.619 0.00 0.00 0.00 4.16
380 509 7.575332 TCTTGTTTTTCGAAAGGTCAAAAAG 57.425 32.000 10.98 12.45 30.94 2.27
507 642 1.153168 GCGGCTGCCAGGATTAGAA 60.153 57.895 20.29 0.00 33.98 2.10
508 643 2.315781 CTGCGGCTGCCAGGATTAGA 62.316 60.000 20.29 0.00 41.78 2.10
509 644 1.890979 CTGCGGCTGCCAGGATTAG 60.891 63.158 20.29 0.00 41.78 1.73
510 645 2.190313 CTGCGGCTGCCAGGATTA 59.810 61.111 20.29 0.00 41.78 1.75
511 646 3.574074 AACTGCGGCTGCCAGGATT 62.574 57.895 20.29 4.45 41.78 3.01
512 647 3.984193 GAACTGCGGCTGCCAGGAT 62.984 63.158 20.29 6.20 41.78 3.24
513 648 4.704833 GAACTGCGGCTGCCAGGA 62.705 66.667 20.29 11.65 41.78 3.86
514 649 4.711949 AGAACTGCGGCTGCCAGG 62.712 66.667 20.29 10.03 41.78 4.45
515 650 1.799258 AAAAGAACTGCGGCTGCCAG 61.799 55.000 20.29 14.63 41.78 4.85
516 651 1.391157 AAAAAGAACTGCGGCTGCCA 61.391 50.000 20.29 1.98 41.78 4.92
517 652 1.363807 AAAAAGAACTGCGGCTGCC 59.636 52.632 16.57 9.11 41.78 4.85
553 688 4.694233 ACGCAGGAGCAGCCAGTG 62.694 66.667 0.00 0.00 42.27 3.66
554 689 4.694233 CACGCAGGAGCAGCCAGT 62.694 66.667 0.00 0.00 42.27 4.00
578 713 2.941025 ATGTGGTGGGGGACTGGG 60.941 66.667 0.00 0.00 0.00 4.45
579 714 1.574526 ATCATGTGGTGGGGGACTGG 61.575 60.000 0.00 0.00 0.00 4.00
580 715 0.107017 GATCATGTGGTGGGGGACTG 60.107 60.000 0.00 0.00 0.00 3.51
581 716 1.281925 GGATCATGTGGTGGGGGACT 61.282 60.000 0.00 0.00 0.00 3.85
582 717 1.227383 GGATCATGTGGTGGGGGAC 59.773 63.158 0.00 0.00 0.00 4.46
583 718 0.848648 TTGGATCATGTGGTGGGGGA 60.849 55.000 0.00 0.00 0.00 4.81
584 719 0.040942 TTTGGATCATGTGGTGGGGG 59.959 55.000 0.00 0.00 0.00 5.40
585 720 1.477553 CTTTGGATCATGTGGTGGGG 58.522 55.000 0.00 0.00 0.00 4.96
586 721 0.819582 GCTTTGGATCATGTGGTGGG 59.180 55.000 0.00 0.00 0.00 4.61
587 722 0.452987 CGCTTTGGATCATGTGGTGG 59.547 55.000 0.00 0.00 0.00 4.61
588 723 0.179156 GCGCTTTGGATCATGTGGTG 60.179 55.000 0.00 0.00 0.00 4.17
589 724 1.647545 CGCGCTTTGGATCATGTGGT 61.648 55.000 5.56 0.00 0.00 4.16
590 725 1.063006 CGCGCTTTGGATCATGTGG 59.937 57.895 5.56 0.00 0.00 4.17
591 726 0.168788 AACGCGCTTTGGATCATGTG 59.831 50.000 5.73 0.00 0.00 3.21
592 727 0.447801 GAACGCGCTTTGGATCATGT 59.552 50.000 5.73 0.00 0.00 3.21
593 728 0.587242 CGAACGCGCTTTGGATCATG 60.587 55.000 5.73 0.00 0.00 3.07
594 729 0.739462 TCGAACGCGCTTTGGATCAT 60.739 50.000 5.73 0.00 37.46 2.45
595 730 1.351430 CTCGAACGCGCTTTGGATCA 61.351 55.000 11.55 0.00 37.46 2.92
596 731 1.345176 CTCGAACGCGCTTTGGATC 59.655 57.895 11.55 0.00 37.46 3.36
597 732 1.352156 GACTCGAACGCGCTTTGGAT 61.352 55.000 11.55 3.14 37.46 3.41
598 733 2.019951 GACTCGAACGCGCTTTGGA 61.020 57.895 5.73 7.59 37.46 3.53
599 734 2.470286 GACTCGAACGCGCTTTGG 59.530 61.111 5.73 2.45 37.46 3.28
600 735 1.827315 TTGGACTCGAACGCGCTTTG 61.827 55.000 5.73 4.08 37.46 2.77
601 736 0.949105 ATTGGACTCGAACGCGCTTT 60.949 50.000 5.73 0.71 37.46 3.51
602 737 1.374252 ATTGGACTCGAACGCGCTT 60.374 52.632 5.73 0.00 37.46 4.68
603 738 2.094659 CATTGGACTCGAACGCGCT 61.095 57.895 5.73 0.00 37.46 5.92
604 739 1.623081 TTCATTGGACTCGAACGCGC 61.623 55.000 5.73 0.00 37.46 6.86
605 740 0.366871 CTTCATTGGACTCGAACGCG 59.633 55.000 3.53 3.53 39.35 6.01
606 741 0.095417 GCTTCATTGGACTCGAACGC 59.905 55.000 0.00 0.00 0.00 4.84
607 742 1.656095 GAGCTTCATTGGACTCGAACG 59.344 52.381 0.00 0.00 0.00 3.95
608 743 2.688507 TGAGCTTCATTGGACTCGAAC 58.311 47.619 0.00 0.00 31.64 3.95
609 744 3.067106 GTTGAGCTTCATTGGACTCGAA 58.933 45.455 0.00 0.00 31.64 3.71
610 745 2.612972 GGTTGAGCTTCATTGGACTCGA 60.613 50.000 0.00 0.00 31.64 4.04
611 746 1.734465 GGTTGAGCTTCATTGGACTCG 59.266 52.381 0.00 0.00 31.64 4.18
612 747 1.734465 CGGTTGAGCTTCATTGGACTC 59.266 52.381 0.00 0.00 0.00 3.36
613 748 1.611673 CCGGTTGAGCTTCATTGGACT 60.612 52.381 0.00 0.00 0.00 3.85
614 749 0.804989 CCGGTTGAGCTTCATTGGAC 59.195 55.000 0.00 0.00 0.00 4.02
615 750 0.322456 CCCGGTTGAGCTTCATTGGA 60.322 55.000 0.00 0.00 0.00 3.53
616 751 1.937546 GCCCGGTTGAGCTTCATTGG 61.938 60.000 0.00 0.00 0.00 3.16
617 752 1.508088 GCCCGGTTGAGCTTCATTG 59.492 57.895 0.00 0.00 0.00 2.82
618 753 1.678970 GGCCCGGTTGAGCTTCATT 60.679 57.895 0.00 0.00 0.00 2.57
619 754 2.044946 GGCCCGGTTGAGCTTCAT 60.045 61.111 0.00 0.00 0.00 2.57
620 755 3.565214 TGGCCCGGTTGAGCTTCA 61.565 61.111 0.00 0.00 0.00 3.02
621 756 3.056328 GTGGCCCGGTTGAGCTTC 61.056 66.667 0.00 0.00 0.00 3.86
645 780 0.984961 TGGATTCTGGGCCTCCTCAG 60.985 60.000 4.53 0.66 0.00 3.35
691 827 1.742768 CACTCCTATCTGCCCGTCC 59.257 63.158 0.00 0.00 0.00 4.79
700 836 0.820891 TACGGACGGCCACTCCTATC 60.821 60.000 8.76 0.00 0.00 2.08
701 837 0.822532 CTACGGACGGCCACTCCTAT 60.823 60.000 8.76 5.42 0.00 2.57
702 838 1.452651 CTACGGACGGCCACTCCTA 60.453 63.158 8.76 5.55 0.00 2.94
703 839 2.754658 CTACGGACGGCCACTCCT 60.755 66.667 8.76 4.81 0.00 3.69
704 840 4.509737 GCTACGGACGGCCACTCC 62.510 72.222 8.76 4.77 0.00 3.85
706 842 3.760035 CTGCTACGGACGGCCACT 61.760 66.667 8.76 0.00 0.00 4.00
707 843 4.814294 CCTGCTACGGACGGCCAC 62.814 72.222 8.76 0.00 0.00 5.01
746 882 3.190744 TCTCTCTCCGATACACAACACAC 59.809 47.826 0.00 0.00 0.00 3.82
757 893 2.944129 CCTCTTTCCTCTCTCTCCGAT 58.056 52.381 0.00 0.00 0.00 4.18
779 915 2.515912 GCGGCGGAAACATCTAAAAAG 58.484 47.619 9.78 0.00 0.00 2.27
783 919 1.812093 CGGCGGCGGAAACATCTAA 60.812 57.895 25.36 0.00 0.00 2.10
806 948 0.955919 GAAAGGGAAGTGGAGTGGCG 60.956 60.000 0.00 0.00 0.00 5.69
807 949 0.402121 AGAAAGGGAAGTGGAGTGGC 59.598 55.000 0.00 0.00 0.00 5.01
808 950 2.553247 GGAAGAAAGGGAAGTGGAGTGG 60.553 54.545 0.00 0.00 0.00 4.00
816 958 1.562008 GGGAGGAGGAAGAAAGGGAAG 59.438 57.143 0.00 0.00 0.00 3.46
842 984 0.391793 GAAGAAGGGGAAGCGGAGTG 60.392 60.000 0.00 0.00 0.00 3.51
849 991 0.393132 GGCGGAAGAAGAAGGGGAAG 60.393 60.000 0.00 0.00 0.00 3.46
850 992 1.683441 GGCGGAAGAAGAAGGGGAA 59.317 57.895 0.00 0.00 0.00 3.97
919 1087 0.532573 GGAGAATCAGGTCGCAGTCA 59.467 55.000 0.00 0.00 36.25 3.41
924 1092 2.682155 AAGAAGGAGAATCAGGTCGC 57.318 50.000 0.00 0.00 36.25 5.19
964 1135 7.175990 GGATCTTTCACACAGGGTATTTGTTTA 59.824 37.037 0.00 0.00 0.00 2.01
982 1176 4.133078 GACATGGTGGATCTGGATCTTTC 58.867 47.826 9.96 2.50 37.92 2.62
983 1177 3.432749 CGACATGGTGGATCTGGATCTTT 60.433 47.826 9.96 0.00 37.92 2.52
984 1178 2.103771 CGACATGGTGGATCTGGATCTT 59.896 50.000 9.96 0.00 37.92 2.40
1182 1410 3.282745 CTCCACCACCCTGTCGTCG 62.283 68.421 0.00 0.00 0.00 5.12
1183 1411 2.657237 CTCCACCACCCTGTCGTC 59.343 66.667 0.00 0.00 0.00 4.20
1184 1412 2.923035 CCTCCACCACCCTGTCGT 60.923 66.667 0.00 0.00 0.00 4.34
1321 1576 2.268920 GATCACCCAAGGCTCGCA 59.731 61.111 0.00 0.00 0.00 5.10
2264 4091 1.448540 CATCAGGCGGTGGTGACTC 60.449 63.158 0.00 0.00 40.07 3.36
2267 4094 1.480212 AAGTCATCAGGCGGTGGTGA 61.480 55.000 0.00 0.00 44.56 4.02
2281 4111 2.124109 TTGCCGGGCACAAAGTCA 60.124 55.556 23.78 1.36 38.71 3.41
2307 4137 0.531532 GGACATGGAGCTGTCGATGG 60.532 60.000 0.00 0.00 45.26 3.51
2310 4140 1.893062 CTGGACATGGAGCTGTCGA 59.107 57.895 0.00 0.00 45.26 4.20
2312 4142 0.461693 GAGCTGGACATGGAGCTGTC 60.462 60.000 17.85 0.00 45.72 3.51
2313 4143 1.601171 GAGCTGGACATGGAGCTGT 59.399 57.895 17.85 0.00 45.72 4.40
2318 4148 3.785859 GCCGGAGCTGGACATGGA 61.786 66.667 5.05 0.00 35.50 3.41
2383 4250 1.601197 AGTGAGCACGTCGGAGAGT 60.601 57.895 0.00 0.00 36.95 3.24
2405 4278 3.311110 GGTGCAGAGGGTGTCGGA 61.311 66.667 0.00 0.00 0.00 4.55
2631 4519 4.176752 CAGACCCCCGCTAAGCCC 62.177 72.222 0.00 0.00 0.00 5.19
2632 4520 4.176752 CCAGACCCCCGCTAAGCC 62.177 72.222 0.00 0.00 0.00 4.35
2633 4521 1.119574 TATCCAGACCCCCGCTAAGC 61.120 60.000 0.00 0.00 0.00 3.09
2634 4522 0.680061 GTATCCAGACCCCCGCTAAG 59.320 60.000 0.00 0.00 0.00 2.18
2636 4524 1.152398 GGTATCCAGACCCCCGCTA 60.152 63.158 0.00 0.00 32.88 4.26
2681 4584 2.365582 CCGTGGATTTCTCGGGAATTT 58.634 47.619 0.00 0.00 40.49 1.82
2682 4585 2.017113 GCCGTGGATTTCTCGGGAATT 61.017 52.381 0.00 0.00 43.77 2.17
2693 4596 0.676782 GCAGGTTGTAGCCGTGGATT 60.677 55.000 0.00 0.00 0.00 3.01
2854 4959 3.565482 TCTTTGCTTGTCGAAAATCTGCT 59.435 39.130 0.00 0.00 0.00 4.24
2859 4964 2.955660 TGGGTCTTTGCTTGTCGAAAAT 59.044 40.909 0.00 0.00 0.00 1.82
2860 4965 2.370349 TGGGTCTTTGCTTGTCGAAAA 58.630 42.857 0.00 0.00 0.00 2.29
2899 5004 2.566279 GGCATGAGATAGCTGGAGATGA 59.434 50.000 0.00 0.00 0.00 2.92
3051 5582 4.442706 ACCAACATATCGATTGACCTCAC 58.557 43.478 1.71 0.00 0.00 3.51
3145 5683 8.477419 AGAAATTTGTCAACAGGAAGGAAATA 57.523 30.769 0.00 0.00 0.00 1.40
3315 5861 4.997565 TCCTTTGAAACTGCACAGAAAAG 58.002 39.130 4.31 8.29 0.00 2.27
3345 5895 2.246397 CGCACGCCGCTTCATATG 59.754 61.111 0.00 0.00 39.08 1.78
3365 5915 2.094286 GCGAGAGGATCCCATAGACATG 60.094 54.545 8.55 0.00 33.66 3.21
3419 5969 1.831736 ACATCACCCTTTCCTCCTACG 59.168 52.381 0.00 0.00 0.00 3.51
3522 6684 7.472334 AACTTGTGAGAGCAAATAATCCATT 57.528 32.000 0.00 0.00 0.00 3.16
3530 6692 5.105392 TGGTTTGAAACTTGTGAGAGCAAAT 60.105 36.000 8.09 0.00 0.00 2.32
3698 6900 7.394923 GGACATCATCTTGTACTAGCTACCTAT 59.605 40.741 0.00 0.00 0.00 2.57
3797 8448 4.009675 AGTAAGATCAAAATGCAGCCGAA 58.990 39.130 0.00 0.00 0.00 4.30
3837 8490 8.428536 CGAGACACTTATTTTGAAACAGAGTAG 58.571 37.037 0.00 0.00 0.00 2.57
3840 8493 7.408132 TCGAGACACTTATTTTGAAACAGAG 57.592 36.000 0.00 0.00 0.00 3.35
3842 8495 8.926710 ACTATCGAGACACTTATTTTGAAACAG 58.073 33.333 0.00 0.00 0.00 3.16
3843 8496 8.708742 CACTATCGAGACACTTATTTTGAAACA 58.291 33.333 0.00 0.00 0.00 2.83
3844 8497 8.922676 TCACTATCGAGACACTTATTTTGAAAC 58.077 33.333 0.00 0.00 0.00 2.78
3846 8499 9.302345 GATCACTATCGAGACACTTATTTTGAA 57.698 33.333 0.00 0.00 0.00 2.69
3847 8500 8.466798 TGATCACTATCGAGACACTTATTTTGA 58.533 33.333 0.00 0.00 34.60 2.69
3848 8501 8.535592 GTGATCACTATCGAGACACTTATTTTG 58.464 37.037 18.83 0.00 34.60 2.44
3849 8502 8.251026 TGTGATCACTATCGAGACACTTATTTT 58.749 33.333 25.55 0.00 34.60 1.82
3850 8503 7.772166 TGTGATCACTATCGAGACACTTATTT 58.228 34.615 25.55 0.00 34.60 1.40
3855 8513 4.459337 TGTTGTGATCACTATCGAGACACT 59.541 41.667 25.55 0.00 34.60 3.55
3859 8517 3.181500 CGGTGTTGTGATCACTATCGAGA 60.181 47.826 25.55 1.39 34.60 4.04
4004 8667 2.424601 CCCAATACTTGTGCCACATCTG 59.575 50.000 0.00 0.00 0.00 2.90
4005 8668 2.041620 ACCCAATACTTGTGCCACATCT 59.958 45.455 0.00 0.00 0.00 2.90
4006 8669 2.446435 ACCCAATACTTGTGCCACATC 58.554 47.619 0.00 0.00 0.00 3.06
4007 8670 2.562298 CAACCCAATACTTGTGCCACAT 59.438 45.455 0.00 0.00 0.00 3.21
4040 8724 4.569341 CAAACGAATTTGCCCCCG 57.431 55.556 0.00 0.00 38.92 5.73
4052 8740 6.525121 TCAATCAACTGAGTAAGACAAACG 57.475 37.500 0.00 0.00 0.00 3.60
4053 8741 9.979270 CATATCAATCAACTGAGTAAGACAAAC 57.021 33.333 0.00 0.00 0.00 2.93
4055 8743 7.770433 CCCATATCAATCAACTGAGTAAGACAA 59.230 37.037 0.00 0.00 0.00 3.18
4169 8889 4.372235 GCATGTTGCGCTCATCAC 57.628 55.556 9.73 4.67 31.71 3.06
4182 8902 0.462225 CTCAGGAGAGCCAGTGCATG 60.462 60.000 0.00 0.00 41.13 4.06
4200 8920 1.208293 GTTTCGGCAAGATCTCCCTCT 59.792 52.381 0.00 0.00 0.00 3.69
4261 8983 3.940221 GCATTTTGGCAATATTGAAGGCA 59.060 39.130 19.73 7.97 35.94 4.75
4470 10619 3.756434 AGCGTGCCATACTGTACAAATTT 59.244 39.130 0.00 0.00 0.00 1.82
4486 10635 0.094730 CGCAACTAAACCTAGCGTGC 59.905 55.000 0.00 0.00 43.08 5.34
4490 10639 1.661112 CAGCTCGCAACTAAACCTAGC 59.339 52.381 0.00 0.00 0.00 3.42
4491 10640 2.960819 ACAGCTCGCAACTAAACCTAG 58.039 47.619 0.00 0.00 0.00 3.02
4492 10641 3.064207 CAACAGCTCGCAACTAAACCTA 58.936 45.455 0.00 0.00 0.00 3.08
4493 10642 1.873591 CAACAGCTCGCAACTAAACCT 59.126 47.619 0.00 0.00 0.00 3.50
4494 10643 1.871039 TCAACAGCTCGCAACTAAACC 59.129 47.619 0.00 0.00 0.00 3.27
4495 10644 3.545633 CTTCAACAGCTCGCAACTAAAC 58.454 45.455 0.00 0.00 0.00 2.01
4496 10645 2.548057 CCTTCAACAGCTCGCAACTAAA 59.452 45.455 0.00 0.00 0.00 1.85
4497 10646 2.143122 CCTTCAACAGCTCGCAACTAA 58.857 47.619 0.00 0.00 0.00 2.24
4498 10647 1.070134 ACCTTCAACAGCTCGCAACTA 59.930 47.619 0.00 0.00 0.00 2.24
4499 10648 0.179045 ACCTTCAACAGCTCGCAACT 60.179 50.000 0.00 0.00 0.00 3.16
4500 10649 0.040958 CACCTTCAACAGCTCGCAAC 60.041 55.000 0.00 0.00 0.00 4.17
4501 10650 0.179059 TCACCTTCAACAGCTCGCAA 60.179 50.000 0.00 0.00 0.00 4.85
4502 10651 0.179059 TTCACCTTCAACAGCTCGCA 60.179 50.000 0.00 0.00 0.00 5.10
4503 10652 1.160137 ATTCACCTTCAACAGCTCGC 58.840 50.000 0.00 0.00 0.00 5.03
4504 10653 2.345641 CGTATTCACCTTCAACAGCTCG 59.654 50.000 0.00 0.00 0.00 5.03
4505 10654 3.585862 TCGTATTCACCTTCAACAGCTC 58.414 45.455 0.00 0.00 0.00 4.09
4506 10655 3.678056 TCGTATTCACCTTCAACAGCT 57.322 42.857 0.00 0.00 0.00 4.24
4507 10656 3.063997 CCATCGTATTCACCTTCAACAGC 59.936 47.826 0.00 0.00 0.00 4.40
4508 10657 4.093408 CACCATCGTATTCACCTTCAACAG 59.907 45.833 0.00 0.00 0.00 3.16
4509 10658 4.000325 CACCATCGTATTCACCTTCAACA 59.000 43.478 0.00 0.00 0.00 3.33
4510 10659 3.374058 CCACCATCGTATTCACCTTCAAC 59.626 47.826 0.00 0.00 0.00 3.18
4511 10660 3.008594 ACCACCATCGTATTCACCTTCAA 59.991 43.478 0.00 0.00 0.00 2.69
4512 10661 2.569853 ACCACCATCGTATTCACCTTCA 59.430 45.455 0.00 0.00 0.00 3.02
4513 10662 3.195661 GACCACCATCGTATTCACCTTC 58.804 50.000 0.00 0.00 0.00 3.46
4514 10663 2.569853 TGACCACCATCGTATTCACCTT 59.430 45.455 0.00 0.00 0.00 3.50
4515 10664 2.184533 TGACCACCATCGTATTCACCT 58.815 47.619 0.00 0.00 0.00 4.00
4516 10665 2.684001 TGACCACCATCGTATTCACC 57.316 50.000 0.00 0.00 0.00 4.02
4517 10666 4.250464 TCTTTGACCACCATCGTATTCAC 58.750 43.478 0.00 0.00 0.00 3.18
4518 10667 4.545208 TCTTTGACCACCATCGTATTCA 57.455 40.909 0.00 0.00 0.00 2.57
4519 10668 5.873179 TTTCTTTGACCACCATCGTATTC 57.127 39.130 0.00 0.00 0.00 1.75
4520 10669 7.931578 TTATTTCTTTGACCACCATCGTATT 57.068 32.000 0.00 0.00 0.00 1.89
4521 10670 9.793259 ATATTATTTCTTTGACCACCATCGTAT 57.207 29.630 0.00 0.00 0.00 3.06
4523 10672 9.621629 TTATATTATTTCTTTGACCACCATCGT 57.378 29.630 0.00 0.00 0.00 3.73
4524 10673 9.878599 GTTATATTATTTCTTTGACCACCATCG 57.121 33.333 0.00 0.00 0.00 3.84
4525 10674 9.878599 CGTTATATTATTTCTTTGACCACCATC 57.121 33.333 0.00 0.00 0.00 3.51
4526 10675 9.621629 TCGTTATATTATTTCTTTGACCACCAT 57.378 29.630 0.00 0.00 0.00 3.55
4527 10676 9.451002 TTCGTTATATTATTTCTTTGACCACCA 57.549 29.630 0.00 0.00 0.00 4.17
4528 10677 9.931210 CTTCGTTATATTATTTCTTTGACCACC 57.069 33.333 0.00 0.00 0.00 4.61
4536 10685 9.886132 ACACAGGACTTCGTTATATTATTTCTT 57.114 29.630 0.00 0.00 0.00 2.52
4537 10686 9.886132 AACACAGGACTTCGTTATATTATTTCT 57.114 29.630 0.00 0.00 0.00 2.52
4542 10691 9.577110 CAACTAACACAGGACTTCGTTATATTA 57.423 33.333 0.00 0.00 0.00 0.98
4543 10692 7.064253 GCAACTAACACAGGACTTCGTTATATT 59.936 37.037 0.00 0.00 0.00 1.28
4544 10693 6.534079 GCAACTAACACAGGACTTCGTTATAT 59.466 38.462 0.00 0.00 0.00 0.86
4545 10694 5.865552 GCAACTAACACAGGACTTCGTTATA 59.134 40.000 0.00 0.00 0.00 0.98
4546 10695 4.689345 GCAACTAACACAGGACTTCGTTAT 59.311 41.667 0.00 0.00 0.00 1.89
4547 10696 4.053295 GCAACTAACACAGGACTTCGTTA 58.947 43.478 0.00 0.00 0.00 3.18
4548 10697 2.870411 GCAACTAACACAGGACTTCGTT 59.130 45.455 0.00 0.00 0.00 3.85
4549 10698 2.480845 GCAACTAACACAGGACTTCGT 58.519 47.619 0.00 0.00 0.00 3.85
4550 10699 1.455786 CGCAACTAACACAGGACTTCG 59.544 52.381 0.00 0.00 0.00 3.79
4551 10700 2.731976 CTCGCAACTAACACAGGACTTC 59.268 50.000 0.00 0.00 0.00 3.01
4552 10701 2.755650 CTCGCAACTAACACAGGACTT 58.244 47.619 0.00 0.00 0.00 3.01
4553 10702 1.605712 GCTCGCAACTAACACAGGACT 60.606 52.381 0.00 0.00 0.00 3.85
4554 10703 0.790814 GCTCGCAACTAACACAGGAC 59.209 55.000 0.00 0.00 0.00 3.85
4555 10704 0.679505 AGCTCGCAACTAACACAGGA 59.320 50.000 0.00 0.00 0.00 3.86
4556 10705 0.792640 CAGCTCGCAACTAACACAGG 59.207 55.000 0.00 0.00 0.00 4.00
4557 10706 1.502231 ACAGCTCGCAACTAACACAG 58.498 50.000 0.00 0.00 0.00 3.66
4558 10707 1.597195 CAACAGCTCGCAACTAACACA 59.403 47.619 0.00 0.00 0.00 3.72
4559 10708 1.864711 TCAACAGCTCGCAACTAACAC 59.135 47.619 0.00 0.00 0.00 3.32
4560 10709 2.135139 CTCAACAGCTCGCAACTAACA 58.865 47.619 0.00 0.00 0.00 2.41
4561 10710 1.461127 CCTCAACAGCTCGCAACTAAC 59.539 52.381 0.00 0.00 0.00 2.34
4562 10711 1.070134 ACCTCAACAGCTCGCAACTAA 59.930 47.619 0.00 0.00 0.00 2.24
4563 10712 0.679505 ACCTCAACAGCTCGCAACTA 59.320 50.000 0.00 0.00 0.00 2.24
4564 10713 0.882042 CACCTCAACAGCTCGCAACT 60.882 55.000 0.00 0.00 0.00 3.16
4565 10714 0.880278 TCACCTCAACAGCTCGCAAC 60.880 55.000 0.00 0.00 0.00 4.17
4566 10715 0.179059 TTCACCTCAACAGCTCGCAA 60.179 50.000 0.00 0.00 0.00 4.85
4567 10716 0.035317 ATTCACCTCAACAGCTCGCA 59.965 50.000 0.00 0.00 0.00 5.10
4568 10717 1.661112 GTATTCACCTCAACAGCTCGC 59.339 52.381 0.00 0.00 0.00 5.03
4569 10718 1.920574 CGTATTCACCTCAACAGCTCG 59.079 52.381 0.00 0.00 0.00 5.03
4570 10719 3.232213 TCGTATTCACCTCAACAGCTC 57.768 47.619 0.00 0.00 0.00 4.09
4571 10720 3.055819 ACATCGTATTCACCTCAACAGCT 60.056 43.478 0.00 0.00 0.00 4.24
4572 10721 3.062639 CACATCGTATTCACCTCAACAGC 59.937 47.826 0.00 0.00 0.00 4.40
4573 10722 4.494484 TCACATCGTATTCACCTCAACAG 58.506 43.478 0.00 0.00 0.00 3.16
4574 10723 4.219725 TCTCACATCGTATTCACCTCAACA 59.780 41.667 0.00 0.00 0.00 3.33
4575 10724 4.563184 GTCTCACATCGTATTCACCTCAAC 59.437 45.833 0.00 0.00 0.00 3.18
4576 10725 4.462834 AGTCTCACATCGTATTCACCTCAA 59.537 41.667 0.00 0.00 0.00 3.02
4577 10726 4.017126 AGTCTCACATCGTATTCACCTCA 58.983 43.478 0.00 0.00 0.00 3.86
4578 10727 4.640789 AGTCTCACATCGTATTCACCTC 57.359 45.455 0.00 0.00 0.00 3.85
4579 10728 4.462834 TCAAGTCTCACATCGTATTCACCT 59.537 41.667 0.00 0.00 0.00 4.00
4580 10729 4.744570 TCAAGTCTCACATCGTATTCACC 58.255 43.478 0.00 0.00 0.00 4.02
4581 10730 5.641709 TCTCAAGTCTCACATCGTATTCAC 58.358 41.667 0.00 0.00 0.00 3.18
4582 10731 5.897377 TCTCAAGTCTCACATCGTATTCA 57.103 39.130 0.00 0.00 0.00 2.57
4583 10732 6.254589 CCTTTCTCAAGTCTCACATCGTATTC 59.745 42.308 0.00 0.00 0.00 1.75
4584 10733 6.102663 CCTTTCTCAAGTCTCACATCGTATT 58.897 40.000 0.00 0.00 0.00 1.89
4585 10734 5.186021 ACCTTTCTCAAGTCTCACATCGTAT 59.814 40.000 0.00 0.00 0.00 3.06
4586 10735 4.523173 ACCTTTCTCAAGTCTCACATCGTA 59.477 41.667 0.00 0.00 0.00 3.43
4587 10736 3.322254 ACCTTTCTCAAGTCTCACATCGT 59.678 43.478 0.00 0.00 0.00 3.73
4588 10737 3.677121 CACCTTTCTCAAGTCTCACATCG 59.323 47.826 0.00 0.00 0.00 3.84
4589 10738 4.887748 TCACCTTTCTCAAGTCTCACATC 58.112 43.478 0.00 0.00 0.00 3.06
4590 10739 4.963318 TCACCTTTCTCAAGTCTCACAT 57.037 40.909 0.00 0.00 0.00 3.21
4591 10740 4.081142 TGTTCACCTTTCTCAAGTCTCACA 60.081 41.667 0.00 0.00 0.00 3.58
4592 10741 4.442706 TGTTCACCTTTCTCAAGTCTCAC 58.557 43.478 0.00 0.00 0.00 3.51
4593 10742 4.443457 CCTGTTCACCTTTCTCAAGTCTCA 60.443 45.833 0.00 0.00 0.00 3.27
4594 10743 4.061596 CCTGTTCACCTTTCTCAAGTCTC 58.938 47.826 0.00 0.00 0.00 3.36
4595 10744 3.711704 TCCTGTTCACCTTTCTCAAGTCT 59.288 43.478 0.00 0.00 0.00 3.24
4596 10745 3.810386 GTCCTGTTCACCTTTCTCAAGTC 59.190 47.826 0.00 0.00 0.00 3.01
4597 10746 3.456277 AGTCCTGTTCACCTTTCTCAAGT 59.544 43.478 0.00 0.00 0.00 3.16
4598 10747 3.812053 CAGTCCTGTTCACCTTTCTCAAG 59.188 47.826 0.00 0.00 0.00 3.02
4599 10748 3.433598 CCAGTCCTGTTCACCTTTCTCAA 60.434 47.826 0.00 0.00 0.00 3.02
4600 10749 2.104792 CCAGTCCTGTTCACCTTTCTCA 59.895 50.000 0.00 0.00 0.00 3.27
4601 10750 2.772287 CCAGTCCTGTTCACCTTTCTC 58.228 52.381 0.00 0.00 0.00 2.87
4602 10751 1.202818 GCCAGTCCTGTTCACCTTTCT 60.203 52.381 0.00 0.00 0.00 2.52
4603 10752 1.239347 GCCAGTCCTGTTCACCTTTC 58.761 55.000 0.00 0.00 0.00 2.62
4604 10753 0.535102 CGCCAGTCCTGTTCACCTTT 60.535 55.000 0.00 0.00 0.00 3.11
4605 10754 1.071471 CGCCAGTCCTGTTCACCTT 59.929 57.895 0.00 0.00 0.00 3.50
4606 10755 0.830444 TACGCCAGTCCTGTTCACCT 60.830 55.000 0.00 0.00 0.00 4.00
4607 10756 0.389948 CTACGCCAGTCCTGTTCACC 60.390 60.000 0.00 0.00 0.00 4.02
4608 10757 0.601558 TCTACGCCAGTCCTGTTCAC 59.398 55.000 0.00 0.00 0.00 3.18
4609 10758 0.888619 CTCTACGCCAGTCCTGTTCA 59.111 55.000 0.00 0.00 0.00 3.18
4610 10759 0.889306 ACTCTACGCCAGTCCTGTTC 59.111 55.000 0.00 0.00 0.00 3.18
4611 10760 1.817447 GTACTCTACGCCAGTCCTGTT 59.183 52.381 0.00 0.00 0.00 3.16
4612 10761 1.461559 GTACTCTACGCCAGTCCTGT 58.538 55.000 0.00 0.00 0.00 4.00
4613 10762 0.739561 GGTACTCTACGCCAGTCCTG 59.260 60.000 0.00 0.00 0.00 3.86
4614 10763 0.624785 AGGTACTCTACGCCAGTCCT 59.375 55.000 0.00 0.00 0.00 3.85
4615 10764 1.472188 AAGGTACTCTACGCCAGTCC 58.528 55.000 0.00 0.00 38.49 3.85
4616 10765 3.441572 TGTAAAGGTACTCTACGCCAGTC 59.558 47.826 0.00 0.00 38.49 3.51
4617 10766 3.424703 TGTAAAGGTACTCTACGCCAGT 58.575 45.455 0.00 0.00 38.49 4.00
4618 10767 4.445452 TTGTAAAGGTACTCTACGCCAG 57.555 45.455 0.00 0.00 38.49 4.85
4619 10768 4.870123 TTTGTAAAGGTACTCTACGCCA 57.130 40.909 0.00 0.00 38.49 5.69
4620 10769 7.038048 ACTAATTTGTAAAGGTACTCTACGCC 58.962 38.462 0.00 0.00 38.49 5.68
4621 10770 8.471361 AACTAATTTGTAAAGGTACTCTACGC 57.529 34.615 0.00 0.00 38.49 4.42
4634 10783 8.973378 GCACTTGCATTTGTAACTAATTTGTAA 58.027 29.630 0.00 0.00 41.59 2.41
4635 10784 8.514136 GCACTTGCATTTGTAACTAATTTGTA 57.486 30.769 0.00 0.00 41.59 2.41
4636 10785 7.406799 GCACTTGCATTTGTAACTAATTTGT 57.593 32.000 0.00 0.00 41.59 2.83
4653 10802 1.134075 CTGCTCGACATGCACTTGC 59.866 57.895 0.00 0.00 42.50 4.01
4654 10803 1.792301 CCTGCTCGACATGCACTTG 59.208 57.895 0.00 0.00 36.37 3.16
4655 10804 2.037136 GCCTGCTCGACATGCACTT 61.037 57.895 0.00 0.00 39.49 3.16
4656 10805 1.607801 TAGCCTGCTCGACATGCACT 61.608 55.000 14.10 6.00 41.91 4.40
4657 10806 0.740868 TTAGCCTGCTCGACATGCAC 60.741 55.000 14.10 0.00 41.91 4.57
4658 10807 0.740868 GTTAGCCTGCTCGACATGCA 60.741 55.000 14.10 7.59 41.91 3.96
4659 10808 1.756375 CGTTAGCCTGCTCGACATGC 61.756 60.000 0.00 7.00 39.96 4.06
4660 10809 0.179137 TCGTTAGCCTGCTCGACATG 60.179 55.000 0.00 0.00 0.00 3.21
4661 10810 0.530744 TTCGTTAGCCTGCTCGACAT 59.469 50.000 0.00 0.00 32.14 3.06
4662 10811 0.109272 CTTCGTTAGCCTGCTCGACA 60.109 55.000 0.00 0.00 32.14 4.35
4663 10812 0.109226 ACTTCGTTAGCCTGCTCGAC 60.109 55.000 0.00 0.00 32.14 4.20
4664 10813 0.170561 GACTTCGTTAGCCTGCTCGA 59.829 55.000 0.00 0.00 0.00 4.04
4665 10814 0.802607 GGACTTCGTTAGCCTGCTCG 60.803 60.000 0.00 0.00 0.00 5.03
4666 10815 0.460459 GGGACTTCGTTAGCCTGCTC 60.460 60.000 0.00 0.00 0.00 4.26
4667 10816 0.905337 AGGGACTTCGTTAGCCTGCT 60.905 55.000 0.00 0.00 27.25 4.24
4668 10817 1.597461 AGGGACTTCGTTAGCCTGC 59.403 57.895 0.00 0.00 27.25 4.85
4681 10830 5.850614 TCTTCTGTTAGTGTACAAAGGGAC 58.149 41.667 0.00 0.00 0.00 4.46
4682 10831 5.510861 GCTCTTCTGTTAGTGTACAAAGGGA 60.511 44.000 0.00 0.00 0.00 4.20
4683 10832 4.691216 GCTCTTCTGTTAGTGTACAAAGGG 59.309 45.833 0.00 0.00 0.00 3.95
4684 10833 4.691216 GGCTCTTCTGTTAGTGTACAAAGG 59.309 45.833 0.00 0.00 0.00 3.11
4685 10834 4.691216 GGGCTCTTCTGTTAGTGTACAAAG 59.309 45.833 0.00 0.00 0.00 2.77
4686 10835 4.347000 AGGGCTCTTCTGTTAGTGTACAAA 59.653 41.667 0.00 0.00 0.00 2.83
4687 10836 3.901844 AGGGCTCTTCTGTTAGTGTACAA 59.098 43.478 0.00 0.00 0.00 2.41
4688 10837 3.507411 AGGGCTCTTCTGTTAGTGTACA 58.493 45.455 0.00 0.00 0.00 2.90
4689 10838 4.496360 GAAGGGCTCTTCTGTTAGTGTAC 58.504 47.826 19.51 0.00 44.43 2.90
4690 10839 4.803098 GAAGGGCTCTTCTGTTAGTGTA 57.197 45.455 19.51 0.00 44.43 2.90
4691 10840 3.686916 GAAGGGCTCTTCTGTTAGTGT 57.313 47.619 19.51 0.00 44.43 3.55
4701 10850 2.165998 GACAAAGCATGAAGGGCTCTT 58.834 47.619 0.00 0.00 41.66 2.85
4702 10851 1.074405 TGACAAAGCATGAAGGGCTCT 59.926 47.619 0.00 0.00 41.66 4.09
4703 10852 1.471684 CTGACAAAGCATGAAGGGCTC 59.528 52.381 0.00 0.00 41.66 4.70
4704 10853 1.074405 TCTGACAAAGCATGAAGGGCT 59.926 47.619 0.00 0.00 45.15 5.19
4705 10854 1.200948 GTCTGACAAAGCATGAAGGGC 59.799 52.381 2.24 0.00 0.00 5.19
4706 10855 2.486982 CTGTCTGACAAAGCATGAAGGG 59.513 50.000 12.16 0.00 0.00 3.95
4707 10856 2.095364 GCTGTCTGACAAAGCATGAAGG 60.095 50.000 12.16 0.00 36.91 3.46
4708 10857 2.812591 AGCTGTCTGACAAAGCATGAAG 59.187 45.455 19.94 4.61 39.47 3.02
4709 10858 2.810274 GAGCTGTCTGACAAAGCATGAA 59.190 45.455 19.94 0.00 39.47 2.57
4710 10859 2.420642 GAGCTGTCTGACAAAGCATGA 58.579 47.619 19.94 0.00 39.47 3.07
4711 10860 1.128136 CGAGCTGTCTGACAAAGCATG 59.872 52.381 19.94 10.47 39.47 4.06
4712 10861 1.270518 ACGAGCTGTCTGACAAAGCAT 60.271 47.619 19.94 8.53 39.47 3.79
4713 10862 0.104855 ACGAGCTGTCTGACAAAGCA 59.895 50.000 19.94 0.00 39.47 3.91
4714 10863 1.221414 AACGAGCTGTCTGACAAAGC 58.779 50.000 12.16 12.39 37.20 3.51
4715 10864 2.866156 TCAAACGAGCTGTCTGACAAAG 59.134 45.455 12.16 2.33 0.00 2.77
4716 10865 2.899976 TCAAACGAGCTGTCTGACAAA 58.100 42.857 12.16 0.00 0.00 2.83
4717 10866 2.595124 TCAAACGAGCTGTCTGACAA 57.405 45.000 12.16 0.00 0.00 3.18
4718 10867 2.407090 CATCAAACGAGCTGTCTGACA 58.593 47.619 10.50 10.50 0.00 3.58
4719 10868 1.728971 CCATCAAACGAGCTGTCTGAC 59.271 52.381 0.00 0.00 0.00 3.51
4720 10869 1.344438 ACCATCAAACGAGCTGTCTGA 59.656 47.619 0.00 0.00 0.00 3.27
4721 10870 1.800805 ACCATCAAACGAGCTGTCTG 58.199 50.000 0.00 0.00 0.00 3.51
4722 10871 2.146342 CAACCATCAAACGAGCTGTCT 58.854 47.619 0.00 0.00 0.00 3.41
4723 10872 1.873591 ACAACCATCAAACGAGCTGTC 59.126 47.619 0.00 0.00 0.00 3.51
4724 10873 1.603802 CACAACCATCAAACGAGCTGT 59.396 47.619 0.00 0.00 0.00 4.40
4725 10874 1.603802 ACACAACCATCAAACGAGCTG 59.396 47.619 0.00 0.00 0.00 4.24
4726 10875 1.603802 CACACAACCATCAAACGAGCT 59.396 47.619 0.00 0.00 0.00 4.09
4740 10889 5.733676 TCAGAATAGCTAAGATGCACACAA 58.266 37.500 0.00 0.00 34.99 3.33
4765 10914 1.276421 AGCATAAAGAGCGACACCTGT 59.724 47.619 0.00 0.00 37.01 4.00
4784 10933 6.834959 ATGTAGCATCGAACAGATACAAAG 57.165 37.500 14.83 0.00 37.52 2.77
4793 10942 5.940192 AACTCAAAATGTAGCATCGAACA 57.060 34.783 0.00 0.00 0.00 3.18
4842 10991 0.788391 CGGCTCTTTCGTTAGCGTTT 59.212 50.000 0.00 0.00 39.71 3.60
4844 10993 1.445582 CCGGCTCTTTCGTTAGCGT 60.446 57.895 0.00 0.00 39.71 5.07
4846 10995 2.220479 ATACCGGCTCTTTCGTTAGC 57.780 50.000 0.00 0.00 38.03 3.09
4852 11001 3.814005 TTGTCCTATACCGGCTCTTTC 57.186 47.619 0.00 0.00 0.00 2.62
4853 11002 3.773119 TCTTTGTCCTATACCGGCTCTTT 59.227 43.478 0.00 0.00 0.00 2.52
4889 11045 0.683179 AATTAACGCAAGGGAGGCCC 60.683 55.000 0.00 0.00 45.90 5.80
4901 11057 5.971202 GCCATGAGACACCATTAAATTAACG 59.029 40.000 0.00 0.00 0.00 3.18
4909 11065 1.831106 ACGAGCCATGAGACACCATTA 59.169 47.619 0.00 0.00 0.00 1.90
4912 11068 1.293179 CACGAGCCATGAGACACCA 59.707 57.895 0.00 0.00 0.00 4.17
4961 11125 4.631813 CCATGAAAGCTGTGTTAGTAGGTC 59.368 45.833 0.00 0.00 0.00 3.85
4991 11164 6.077202 TGGATGCAATATGATAATAGCCCA 57.923 37.500 0.00 0.00 0.00 5.36
4998 11171 5.279106 GCTTTGGCTGGATGCAATATGATAA 60.279 40.000 0.00 0.00 45.15 1.75
5010 11191 2.338015 CGCTGTGCTTTGGCTGGAT 61.338 57.895 0.00 0.00 39.59 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.