Multiple sequence alignment - TraesCS3D01G100100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G100100 chr3D 100.000 4624 0 0 1 4624 51786759 51782136 0.000000e+00 8540.0
1 TraesCS3D01G100100 chr3B 88.094 2503 180 39 1543 3967 82838946 82836484 0.000000e+00 2863.0
2 TraesCS3D01G100100 chr3B 87.518 1354 84 44 490 1813 82849731 82848433 0.000000e+00 1485.0
3 TraesCS3D01G100100 chr3B 83.615 1184 126 37 1810 2964 82848311 82847167 0.000000e+00 1050.0
4 TraesCS3D01G100100 chr3B 83.868 1060 101 32 1369 2404 83444986 83445999 0.000000e+00 946.0
5 TraesCS3D01G100100 chr3B 86.513 519 52 10 2965 3474 82847121 82846612 5.230000e-154 555.0
6 TraesCS3D01G100100 chr3B 87.631 477 49 8 838 1306 83444167 83444641 3.150000e-151 545.0
7 TraesCS3D01G100100 chr3B 88.397 474 22 6 3313 3763 82835325 82834862 1.460000e-149 540.0
8 TraesCS3D01G100100 chr3B 90.659 364 25 5 3482 3839 82846005 82845645 4.190000e-130 475.0
9 TraesCS3D01G100100 chr3B 83.529 510 55 13 810 1307 82839691 82839199 2.540000e-122 449.0
10 TraesCS3D01G100100 chr3B 89.538 325 18 7 1 315 83273362 83273680 9.320000e-107 398.0
11 TraesCS3D01G100100 chr3B 92.929 198 14 0 1 198 82851391 82851194 5.850000e-74 289.0
12 TraesCS3D01G100100 chr3B 84.706 255 37 2 4203 4457 82835584 82835332 2.140000e-63 254.0
13 TraesCS3D01G100100 chr3B 93.333 135 9 0 1369 1503 82839091 82838957 2.820000e-47 200.0
14 TraesCS3D01G100100 chr3B 88.889 117 12 1 479 594 201992953 201992837 4.820000e-30 143.0
15 TraesCS3D01G100100 chr3A 88.852 1785 154 25 2153 3918 64306873 64305115 0.000000e+00 2152.0
16 TraesCS3D01G100100 chr3A 85.358 1325 99 35 490 1759 64308701 64307417 0.000000e+00 1284.0
17 TraesCS3D01G100100 chr3A 91.061 358 15 4 2289 2645 64304852 64304511 7.010000e-128 468.0
18 TraesCS3D01G100100 chr3A 86.822 258 25 4 1901 2153 64307209 64306956 3.520000e-71 279.0
19 TraesCS3D01G100100 chr3A 88.034 117 13 1 479 594 66044487 66044603 2.240000e-28 137.0
20 TraesCS3D01G100100 chr3A 94.737 57 3 0 44 100 64308871 64308815 6.370000e-14 89.8
21 TraesCS3D01G100100 chr5A 85.621 153 21 1 1155 1307 520093060 520093211 4.790000e-35 159.0
22 TraesCS3D01G100100 chr5B 85.906 149 19 2 1160 1307 491032933 491033080 1.720000e-34 158.0
23 TraesCS3D01G100100 chr5D 84.314 153 23 1 1155 1307 408999457 408999608 1.040000e-31 148.0
24 TraesCS3D01G100100 chr5D 88.034 117 13 1 479 594 120783420 120783536 2.240000e-28 137.0
25 TraesCS3D01G100100 chr1A 87.692 130 13 3 479 607 539708905 539708778 1.040000e-31 148.0
26 TraesCS3D01G100100 chr7B 87.023 131 13 3 479 608 363222418 363222291 1.340000e-30 145.0
27 TraesCS3D01G100100 chr1D 87.023 131 14 3 479 608 175775771 175775643 1.340000e-30 145.0
28 TraesCS3D01G100100 chr6D 88.889 117 12 1 479 594 389705059 389704943 4.820000e-30 143.0
29 TraesCS3D01G100100 chr7D 86.260 131 14 3 479 608 60368358 60368231 6.240000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G100100 chr3D 51782136 51786759 4623 True 8540.00 8540 100.0000 1 4624 1 chr3D.!!$R1 4623
1 TraesCS3D01G100100 chr3B 82834862 82839691 4829 True 861.20 2863 87.6118 810 4457 5 chr3B.!!$R2 3647
2 TraesCS3D01G100100 chr3B 82845645 82851391 5746 True 770.80 1485 88.2468 1 3839 5 chr3B.!!$R3 3838
3 TraesCS3D01G100100 chr3B 83444167 83445999 1832 False 745.50 946 85.7495 838 2404 2 chr3B.!!$F2 1566
4 TraesCS3D01G100100 chr3A 64304511 64308871 4360 True 854.56 2152 89.3660 44 3918 5 chr3A.!!$R1 3874

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
348 1762 0.035317 TGCGAGCTGTTGAGGTGAAT 59.965 50.000 0.00 0.0 0.00 2.57 F
449 1863 0.036294 GCAGGCTAACGAAGTCCCTT 60.036 55.000 0.00 0.0 45.00 3.95 F
967 2426 0.608856 TTGATGCGCCATGTTCCTGT 60.609 50.000 4.18 0.0 0.00 4.00 F
1533 3358 0.470766 ACTCGGCCACCAACTAAACA 59.529 50.000 2.24 0.0 0.00 2.83 F
2032 4115 1.068741 GCCGGAGATTCGTATTCTGGT 59.931 52.381 5.05 0.0 39.18 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1514 3339 0.470766 TGTTTAGTTGGTGGCCGAGT 59.529 50.000 0.00 0.00 0.00 4.18 R
1516 3341 1.202830 ACATGTTTAGTTGGTGGCCGA 60.203 47.619 0.00 0.00 0.00 5.54 R
1961 4044 1.206878 TGCTCCTCATACCACTGCAT 58.793 50.000 0.00 0.00 0.00 3.96 R
3016 5265 0.324183 CCCAGAGCCTCTCTCACTGA 60.324 60.000 0.00 0.00 44.35 3.41 R
3970 6895 0.029567 CGAGCGTCCATGGACTCTAC 59.970 60.000 35.84 25.46 39.87 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 121 1.878102 GCTCCATTATACAGGCGGTGG 60.878 57.143 0.00 0.00 0.00 4.61
138 139 3.368323 GGTGGGTGCCAGAATTTATTGTG 60.368 47.826 0.00 0.00 32.34 3.33
232 1646 5.397142 AGAGATGCAATGCAGATACGATA 57.603 39.130 14.98 0.00 43.65 2.92
249 1663 9.204570 AGATACGATAAATTTGTACAGTATGGC 57.795 33.333 0.00 0.00 43.62 4.40
250 1664 8.896320 ATACGATAAATTTGTACAGTATGGCA 57.104 30.769 0.00 0.00 43.62 4.92
251 1665 7.011828 ACGATAAATTTGTACAGTATGGCAC 57.988 36.000 0.00 0.00 43.62 5.01
252 1666 6.126741 CGATAAATTTGTACAGTATGGCACG 58.873 40.000 0.00 0.00 43.62 5.34
253 1667 3.757745 AATTTGTACAGTATGGCACGC 57.242 42.857 0.00 0.00 43.62 5.34
254 1668 2.465860 TTTGTACAGTATGGCACGCT 57.534 45.000 0.00 0.00 43.62 5.07
255 1669 3.596310 TTTGTACAGTATGGCACGCTA 57.404 42.857 0.00 0.00 43.62 4.26
256 1670 2.863401 TGTACAGTATGGCACGCTAG 57.137 50.000 0.00 0.00 43.62 3.42
257 1671 1.407618 TGTACAGTATGGCACGCTAGG 59.592 52.381 0.00 0.00 43.62 3.02
258 1672 1.407979 GTACAGTATGGCACGCTAGGT 59.592 52.381 0.00 0.00 43.62 3.08
259 1673 0.902531 ACAGTATGGCACGCTAGGTT 59.097 50.000 0.00 0.00 43.62 3.50
260 1674 1.278127 ACAGTATGGCACGCTAGGTTT 59.722 47.619 0.00 0.00 43.62 3.27
261 1675 2.498481 ACAGTATGGCACGCTAGGTTTA 59.502 45.455 0.00 0.00 43.62 2.01
262 1676 3.123804 CAGTATGGCACGCTAGGTTTAG 58.876 50.000 0.00 0.00 0.00 1.85
263 1677 2.764572 AGTATGGCACGCTAGGTTTAGT 59.235 45.455 0.00 0.00 0.00 2.24
264 1678 2.781681 ATGGCACGCTAGGTTTAGTT 57.218 45.000 0.00 0.00 0.00 2.24
265 1679 1.803334 TGGCACGCTAGGTTTAGTTG 58.197 50.000 0.00 0.00 0.00 3.16
266 1680 0.446616 GGCACGCTAGGTTTAGTTGC 59.553 55.000 0.00 0.00 37.34 4.17
271 1685 2.011540 GCTAGGTTTAGTTGCGAGCT 57.988 50.000 0.00 0.00 0.00 4.09
272 1686 1.661112 GCTAGGTTTAGTTGCGAGCTG 59.339 52.381 0.00 0.00 0.00 4.24
273 1687 2.931320 GCTAGGTTTAGTTGCGAGCTGT 60.931 50.000 0.00 0.00 0.00 4.40
274 1688 2.256117 AGGTTTAGTTGCGAGCTGTT 57.744 45.000 0.00 0.00 0.00 3.16
275 1689 1.873591 AGGTTTAGTTGCGAGCTGTTG 59.126 47.619 0.00 0.00 0.00 3.33
276 1690 1.871039 GGTTTAGTTGCGAGCTGTTGA 59.129 47.619 0.00 0.00 0.00 3.18
277 1691 2.289547 GGTTTAGTTGCGAGCTGTTGAA 59.710 45.455 0.00 0.00 0.00 2.69
278 1692 3.545633 GTTTAGTTGCGAGCTGTTGAAG 58.454 45.455 0.00 0.00 0.00 3.02
279 1693 1.795768 TAGTTGCGAGCTGTTGAAGG 58.204 50.000 0.00 0.00 0.00 3.46
280 1694 0.179045 AGTTGCGAGCTGTTGAAGGT 60.179 50.000 0.00 0.00 40.07 3.50
281 1695 0.040958 GTTGCGAGCTGTTGAAGGTG 60.041 55.000 0.00 0.00 36.52 4.00
282 1696 0.179059 TTGCGAGCTGTTGAAGGTGA 60.179 50.000 0.00 0.00 36.52 4.02
283 1697 0.179059 TGCGAGCTGTTGAAGGTGAA 60.179 50.000 0.00 0.00 36.52 3.18
284 1698 1.160137 GCGAGCTGTTGAAGGTGAAT 58.840 50.000 0.00 0.00 36.52 2.57
285 1699 2.289382 TGCGAGCTGTTGAAGGTGAATA 60.289 45.455 0.00 0.00 36.52 1.75
286 1700 2.094417 GCGAGCTGTTGAAGGTGAATAC 59.906 50.000 0.00 0.00 36.52 1.89
287 1701 2.345641 CGAGCTGTTGAAGGTGAATACG 59.654 50.000 0.00 0.00 36.52 3.06
288 1702 3.585862 GAGCTGTTGAAGGTGAATACGA 58.414 45.455 0.00 0.00 36.52 3.43
289 1703 4.184629 GAGCTGTTGAAGGTGAATACGAT 58.815 43.478 0.00 0.00 36.52 3.73
290 1704 3.935203 AGCTGTTGAAGGTGAATACGATG 59.065 43.478 0.00 0.00 34.56 3.84
291 1705 3.063997 GCTGTTGAAGGTGAATACGATGG 59.936 47.826 0.00 0.00 0.00 3.51
292 1706 4.253685 CTGTTGAAGGTGAATACGATGGT 58.746 43.478 0.00 0.00 0.00 3.55
293 1707 4.000325 TGTTGAAGGTGAATACGATGGTG 59.000 43.478 0.00 0.00 0.00 4.17
294 1708 3.260475 TGAAGGTGAATACGATGGTGG 57.740 47.619 0.00 0.00 0.00 4.61
295 1709 2.569853 TGAAGGTGAATACGATGGTGGT 59.430 45.455 0.00 0.00 0.00 4.16
296 1710 2.981859 AGGTGAATACGATGGTGGTC 57.018 50.000 0.00 0.00 0.00 4.02
297 1711 2.184533 AGGTGAATACGATGGTGGTCA 58.815 47.619 0.00 0.00 0.00 4.02
298 1712 2.569853 AGGTGAATACGATGGTGGTCAA 59.430 45.455 0.00 0.00 0.00 3.18
299 1713 3.008594 AGGTGAATACGATGGTGGTCAAA 59.991 43.478 0.00 0.00 0.00 2.69
300 1714 3.374058 GGTGAATACGATGGTGGTCAAAG 59.626 47.826 0.00 0.00 0.00 2.77
301 1715 4.250464 GTGAATACGATGGTGGTCAAAGA 58.750 43.478 0.00 0.00 0.00 2.52
302 1716 4.693566 GTGAATACGATGGTGGTCAAAGAA 59.306 41.667 0.00 0.00 0.00 2.52
303 1717 5.180492 GTGAATACGATGGTGGTCAAAGAAA 59.820 40.000 0.00 0.00 0.00 2.52
304 1718 5.943416 TGAATACGATGGTGGTCAAAGAAAT 59.057 36.000 0.00 0.00 0.00 2.17
305 1719 7.065324 GTGAATACGATGGTGGTCAAAGAAATA 59.935 37.037 0.00 0.00 0.00 1.40
306 1720 7.608376 TGAATACGATGGTGGTCAAAGAAATAA 59.392 33.333 0.00 0.00 0.00 1.40
307 1721 8.519799 AATACGATGGTGGTCAAAGAAATAAT 57.480 30.769 0.00 0.00 0.00 1.28
308 1722 9.621629 AATACGATGGTGGTCAAAGAAATAATA 57.378 29.630 0.00 0.00 0.00 0.98
309 1723 9.793259 ATACGATGGTGGTCAAAGAAATAATAT 57.207 29.630 0.00 0.00 0.00 1.28
311 1725 9.621629 ACGATGGTGGTCAAAGAAATAATATAA 57.378 29.630 0.00 0.00 0.00 0.98
312 1726 9.878599 CGATGGTGGTCAAAGAAATAATATAAC 57.121 33.333 0.00 0.00 0.00 1.89
313 1727 9.878599 GATGGTGGTCAAAGAAATAATATAACG 57.121 33.333 0.00 0.00 0.00 3.18
314 1728 9.621629 ATGGTGGTCAAAGAAATAATATAACGA 57.378 29.630 0.00 0.00 0.00 3.85
315 1729 9.451002 TGGTGGTCAAAGAAATAATATAACGAA 57.549 29.630 0.00 0.00 0.00 3.85
316 1730 9.931210 GGTGGTCAAAGAAATAATATAACGAAG 57.069 33.333 0.00 0.00 0.00 3.79
324 1738 9.886132 AAGAAATAATATAACGAAGTCCTGTGT 57.114 29.630 0.00 0.00 45.00 3.72
325 1739 9.886132 AGAAATAATATAACGAAGTCCTGTGTT 57.114 29.630 0.00 0.00 45.00 3.32
330 1744 8.475331 AATATAACGAAGTCCTGTGTTAGTTG 57.525 34.615 0.00 0.00 45.00 3.16
331 1745 2.480845 ACGAAGTCCTGTGTTAGTTGC 58.519 47.619 0.00 0.00 29.74 4.17
332 1746 1.455786 CGAAGTCCTGTGTTAGTTGCG 59.544 52.381 0.00 0.00 0.00 4.85
333 1747 2.750948 GAAGTCCTGTGTTAGTTGCGA 58.249 47.619 0.00 0.00 0.00 5.10
334 1748 2.440539 AGTCCTGTGTTAGTTGCGAG 57.559 50.000 0.00 0.00 0.00 5.03
335 1749 0.790814 GTCCTGTGTTAGTTGCGAGC 59.209 55.000 0.00 0.00 0.00 5.03
336 1750 0.679505 TCCTGTGTTAGTTGCGAGCT 59.320 50.000 0.00 0.00 0.00 4.09
337 1751 0.792640 CCTGTGTTAGTTGCGAGCTG 59.207 55.000 0.00 0.00 0.00 4.24
338 1752 1.502231 CTGTGTTAGTTGCGAGCTGT 58.498 50.000 0.00 0.00 0.00 4.40
339 1753 1.867233 CTGTGTTAGTTGCGAGCTGTT 59.133 47.619 0.00 0.00 0.00 3.16
340 1754 1.597195 TGTGTTAGTTGCGAGCTGTTG 59.403 47.619 0.00 0.00 0.00 3.33
341 1755 1.864711 GTGTTAGTTGCGAGCTGTTGA 59.135 47.619 0.00 0.00 0.00 3.18
342 1756 2.096713 GTGTTAGTTGCGAGCTGTTGAG 60.097 50.000 0.00 0.00 0.00 3.02
343 1757 1.461127 GTTAGTTGCGAGCTGTTGAGG 59.539 52.381 0.00 0.00 0.00 3.86
344 1758 0.679505 TAGTTGCGAGCTGTTGAGGT 59.320 50.000 0.00 0.00 0.00 3.85
345 1759 0.882042 AGTTGCGAGCTGTTGAGGTG 60.882 55.000 0.00 0.00 0.00 4.00
346 1760 0.880278 GTTGCGAGCTGTTGAGGTGA 60.880 55.000 0.00 0.00 0.00 4.02
347 1761 0.179059 TTGCGAGCTGTTGAGGTGAA 60.179 50.000 0.00 0.00 0.00 3.18
348 1762 0.035317 TGCGAGCTGTTGAGGTGAAT 59.965 50.000 0.00 0.00 0.00 2.57
349 1763 1.275010 TGCGAGCTGTTGAGGTGAATA 59.725 47.619 0.00 0.00 0.00 1.75
350 1764 1.661112 GCGAGCTGTTGAGGTGAATAC 59.339 52.381 0.00 0.00 0.00 1.89
351 1765 1.920574 CGAGCTGTTGAGGTGAATACG 59.079 52.381 0.00 0.00 0.00 3.06
352 1766 2.415491 CGAGCTGTTGAGGTGAATACGA 60.415 50.000 0.00 0.00 0.00 3.43
353 1767 3.735208 CGAGCTGTTGAGGTGAATACGAT 60.735 47.826 0.00 0.00 0.00 3.73
354 1768 3.525537 AGCTGTTGAGGTGAATACGATG 58.474 45.455 0.00 0.00 0.00 3.84
355 1769 3.055819 AGCTGTTGAGGTGAATACGATGT 60.056 43.478 0.00 0.00 0.00 3.06
356 1770 3.062639 GCTGTTGAGGTGAATACGATGTG 59.937 47.826 0.00 0.00 0.00 3.21
357 1771 4.494484 CTGTTGAGGTGAATACGATGTGA 58.506 43.478 0.00 0.00 0.00 3.58
358 1772 4.494484 TGTTGAGGTGAATACGATGTGAG 58.506 43.478 0.00 0.00 0.00 3.51
359 1773 4.219725 TGTTGAGGTGAATACGATGTGAGA 59.780 41.667 0.00 0.00 0.00 3.27
360 1774 4.371855 TGAGGTGAATACGATGTGAGAC 57.628 45.455 0.00 0.00 0.00 3.36
361 1775 4.017126 TGAGGTGAATACGATGTGAGACT 58.983 43.478 0.00 0.00 0.00 3.24
362 1776 4.462834 TGAGGTGAATACGATGTGAGACTT 59.537 41.667 0.00 0.00 0.00 3.01
363 1777 4.748892 AGGTGAATACGATGTGAGACTTG 58.251 43.478 0.00 0.00 0.00 3.16
364 1778 4.462834 AGGTGAATACGATGTGAGACTTGA 59.537 41.667 0.00 0.00 0.00 3.02
365 1779 4.800993 GGTGAATACGATGTGAGACTTGAG 59.199 45.833 0.00 0.00 0.00 3.02
366 1780 5.393135 GGTGAATACGATGTGAGACTTGAGA 60.393 44.000 0.00 0.00 0.00 3.27
367 1781 6.093404 GTGAATACGATGTGAGACTTGAGAA 58.907 40.000 0.00 0.00 0.00 2.87
368 1782 6.586463 GTGAATACGATGTGAGACTTGAGAAA 59.414 38.462 0.00 0.00 0.00 2.52
369 1783 6.808704 TGAATACGATGTGAGACTTGAGAAAG 59.191 38.462 0.00 0.00 0.00 2.62
370 1784 3.919216 ACGATGTGAGACTTGAGAAAGG 58.081 45.455 0.00 0.00 0.00 3.11
371 1785 3.322254 ACGATGTGAGACTTGAGAAAGGT 59.678 43.478 0.00 0.00 0.00 3.50
372 1786 3.677121 CGATGTGAGACTTGAGAAAGGTG 59.323 47.826 0.00 0.00 0.00 4.00
373 1787 4.559502 CGATGTGAGACTTGAGAAAGGTGA 60.560 45.833 0.00 0.00 0.00 4.02
374 1788 4.753516 TGTGAGACTTGAGAAAGGTGAA 57.246 40.909 0.00 0.00 0.00 3.18
375 1789 4.442706 TGTGAGACTTGAGAAAGGTGAAC 58.557 43.478 0.00 0.00 0.00 3.18
376 1790 4.081142 TGTGAGACTTGAGAAAGGTGAACA 60.081 41.667 0.00 0.00 0.00 3.18
377 1791 4.509600 GTGAGACTTGAGAAAGGTGAACAG 59.490 45.833 0.00 0.00 0.00 3.16
378 1792 4.061596 GAGACTTGAGAAAGGTGAACAGG 58.938 47.826 0.00 0.00 0.00 4.00
379 1793 3.711704 AGACTTGAGAAAGGTGAACAGGA 59.288 43.478 0.00 0.00 0.00 3.86
380 1794 3.809905 ACTTGAGAAAGGTGAACAGGAC 58.190 45.455 0.00 0.00 0.00 3.85
381 1795 3.456277 ACTTGAGAAAGGTGAACAGGACT 59.544 43.478 0.00 0.00 0.00 3.85
382 1796 3.475566 TGAGAAAGGTGAACAGGACTG 57.524 47.619 0.00 0.00 0.00 3.51
383 1797 2.104792 TGAGAAAGGTGAACAGGACTGG 59.895 50.000 4.14 0.00 34.19 4.00
384 1798 1.202818 AGAAAGGTGAACAGGACTGGC 60.203 52.381 4.14 0.00 34.19 4.85
385 1799 0.535102 AAAGGTGAACAGGACTGGCG 60.535 55.000 4.14 0.00 34.19 5.69
386 1800 1.696097 AAGGTGAACAGGACTGGCGT 61.696 55.000 4.14 0.00 34.19 5.68
387 1801 0.830444 AGGTGAACAGGACTGGCGTA 60.830 55.000 4.14 0.00 34.19 4.42
388 1802 0.389948 GGTGAACAGGACTGGCGTAG 60.390 60.000 4.14 0.00 34.19 3.51
389 1803 0.601558 GTGAACAGGACTGGCGTAGA 59.398 55.000 4.14 0.00 34.19 2.59
390 1804 0.888619 TGAACAGGACTGGCGTAGAG 59.111 55.000 4.14 0.00 34.19 2.43
391 1805 0.889306 GAACAGGACTGGCGTAGAGT 59.111 55.000 4.14 0.00 34.19 3.24
392 1806 2.089980 GAACAGGACTGGCGTAGAGTA 58.910 52.381 4.14 0.00 34.19 2.59
393 1807 1.461559 ACAGGACTGGCGTAGAGTAC 58.538 55.000 4.14 0.00 34.19 2.73
394 1808 0.739561 CAGGACTGGCGTAGAGTACC 59.260 60.000 0.00 0.00 0.00 3.34
395 1809 0.624785 AGGACTGGCGTAGAGTACCT 59.375 55.000 0.00 0.00 0.00 3.08
396 1810 1.005687 AGGACTGGCGTAGAGTACCTT 59.994 52.381 0.00 0.00 0.00 3.50
397 1811 1.823610 GGACTGGCGTAGAGTACCTTT 59.176 52.381 0.00 0.00 0.00 3.11
398 1812 3.019564 GGACTGGCGTAGAGTACCTTTA 58.980 50.000 0.00 0.00 0.00 1.85
399 1813 3.181492 GGACTGGCGTAGAGTACCTTTAC 60.181 52.174 0.00 0.00 0.00 2.01
400 1814 3.424703 ACTGGCGTAGAGTACCTTTACA 58.575 45.455 0.00 0.00 0.00 2.41
401 1815 3.828451 ACTGGCGTAGAGTACCTTTACAA 59.172 43.478 0.00 0.00 0.00 2.41
402 1816 4.281688 ACTGGCGTAGAGTACCTTTACAAA 59.718 41.667 0.00 0.00 0.00 2.83
403 1817 5.046807 ACTGGCGTAGAGTACCTTTACAAAT 60.047 40.000 0.00 0.00 0.00 2.32
404 1818 5.797051 TGGCGTAGAGTACCTTTACAAATT 58.203 37.500 0.00 0.00 0.00 1.82
405 1819 6.934056 TGGCGTAGAGTACCTTTACAAATTA 58.066 36.000 0.00 0.00 0.00 1.40
406 1820 7.037438 TGGCGTAGAGTACCTTTACAAATTAG 58.963 38.462 0.00 0.00 0.00 1.73
407 1821 7.038048 GGCGTAGAGTACCTTTACAAATTAGT 58.962 38.462 0.00 0.00 0.00 2.24
408 1822 7.547019 GGCGTAGAGTACCTTTACAAATTAGTT 59.453 37.037 0.00 0.00 0.00 2.24
409 1823 9.573133 GCGTAGAGTACCTTTACAAATTAGTTA 57.427 33.333 0.00 0.00 0.00 2.24
422 1836 7.406799 ACAAATTAGTTACAAATGCAAGTGC 57.593 32.000 0.00 0.00 42.50 4.40
432 1846 3.256936 GCAAGTGCATGTCGAGCA 58.743 55.556 0.00 0.00 41.59 4.26
433 1847 1.134075 GCAAGTGCATGTCGAGCAG 59.866 57.895 0.00 0.00 43.63 4.24
434 1848 1.792301 CAAGTGCATGTCGAGCAGG 59.208 57.895 0.00 0.00 43.63 4.85
440 1854 2.291843 CATGTCGAGCAGGCTAACG 58.708 57.895 0.00 0.00 0.00 3.18
441 1855 0.179137 CATGTCGAGCAGGCTAACGA 60.179 55.000 0.00 0.00 0.00 3.85
442 1856 0.530744 ATGTCGAGCAGGCTAACGAA 59.469 50.000 6.64 0.16 36.57 3.85
443 1857 0.109272 TGTCGAGCAGGCTAACGAAG 60.109 55.000 6.64 0.00 36.57 3.79
445 1859 0.170561 TCGAGCAGGCTAACGAAGTC 59.829 55.000 3.02 0.00 45.00 3.01
446 1860 0.802607 CGAGCAGGCTAACGAAGTCC 60.803 60.000 0.00 0.00 45.00 3.85
447 1861 0.460459 GAGCAGGCTAACGAAGTCCC 60.460 60.000 0.00 0.00 45.00 4.46
448 1862 0.905337 AGCAGGCTAACGAAGTCCCT 60.905 55.000 0.00 0.00 45.00 4.20
449 1863 0.036294 GCAGGCTAACGAAGTCCCTT 60.036 55.000 0.00 0.00 45.00 3.95
450 1864 1.610886 GCAGGCTAACGAAGTCCCTTT 60.611 52.381 0.00 0.00 45.00 3.11
451 1865 2.076863 CAGGCTAACGAAGTCCCTTTG 58.923 52.381 0.00 0.00 45.00 2.77
452 1866 1.697982 AGGCTAACGAAGTCCCTTTGT 59.302 47.619 0.00 0.00 45.00 2.83
453 1867 2.901839 AGGCTAACGAAGTCCCTTTGTA 59.098 45.455 0.00 0.00 45.00 2.41
454 1868 2.998670 GGCTAACGAAGTCCCTTTGTAC 59.001 50.000 0.00 0.00 45.00 2.90
455 1869 3.555586 GGCTAACGAAGTCCCTTTGTACA 60.556 47.826 0.00 0.00 45.00 2.90
456 1870 3.431233 GCTAACGAAGTCCCTTTGTACAC 59.569 47.826 0.00 0.00 45.00 2.90
457 1871 3.832615 AACGAAGTCCCTTTGTACACT 57.167 42.857 0.00 0.00 45.00 3.55
458 1872 4.942761 AACGAAGTCCCTTTGTACACTA 57.057 40.909 0.00 0.00 45.00 2.74
459 1873 4.942761 ACGAAGTCCCTTTGTACACTAA 57.057 40.909 0.00 0.00 29.74 2.24
460 1874 4.625028 ACGAAGTCCCTTTGTACACTAAC 58.375 43.478 0.00 0.00 29.74 2.34
461 1875 4.099881 ACGAAGTCCCTTTGTACACTAACA 59.900 41.667 0.00 0.00 29.74 2.41
462 1876 4.684703 CGAAGTCCCTTTGTACACTAACAG 59.315 45.833 0.00 0.00 0.00 3.16
463 1877 5.508489 CGAAGTCCCTTTGTACACTAACAGA 60.508 44.000 0.00 0.00 0.00 3.41
464 1878 5.881923 AGTCCCTTTGTACACTAACAGAA 57.118 39.130 0.00 0.00 0.00 3.02
465 1879 5.855045 AGTCCCTTTGTACACTAACAGAAG 58.145 41.667 0.00 0.00 0.00 2.85
466 1880 5.601313 AGTCCCTTTGTACACTAACAGAAGA 59.399 40.000 0.00 0.00 0.00 2.87
467 1881 5.927115 GTCCCTTTGTACACTAACAGAAGAG 59.073 44.000 0.00 0.00 0.00 2.85
468 1882 4.691216 CCCTTTGTACACTAACAGAAGAGC 59.309 45.833 0.00 0.00 0.00 4.09
469 1883 4.691216 CCTTTGTACACTAACAGAAGAGCC 59.309 45.833 0.00 0.00 0.00 4.70
470 1884 3.955650 TGTACACTAACAGAAGAGCCC 57.044 47.619 0.00 0.00 0.00 5.19
471 1885 3.507411 TGTACACTAACAGAAGAGCCCT 58.493 45.455 0.00 0.00 0.00 5.19
472 1886 3.901844 TGTACACTAACAGAAGAGCCCTT 59.098 43.478 0.00 0.00 34.81 3.95
481 1895 2.935481 GAAGAGCCCTTCATGCTTTG 57.065 50.000 2.64 0.00 46.18 2.77
482 1896 2.165998 GAAGAGCCCTTCATGCTTTGT 58.834 47.619 2.64 0.00 46.18 2.83
483 1897 1.831580 AGAGCCCTTCATGCTTTGTC 58.168 50.000 0.00 0.00 39.69 3.18
484 1898 1.074405 AGAGCCCTTCATGCTTTGTCA 59.926 47.619 0.00 0.00 39.69 3.58
485 1899 1.471684 GAGCCCTTCATGCTTTGTCAG 59.528 52.381 0.00 0.00 39.69 3.51
486 1900 1.074405 AGCCCTTCATGCTTTGTCAGA 59.926 47.619 0.00 0.00 34.87 3.27
487 1901 1.200948 GCCCTTCATGCTTTGTCAGAC 59.799 52.381 0.00 0.00 0.00 3.51
488 1902 2.507484 CCCTTCATGCTTTGTCAGACA 58.493 47.619 0.00 0.00 0.00 3.41
502 1916 1.344438 TCAGACAGCTCGTTTGATGGT 59.656 47.619 5.73 0.00 33.98 3.55
527 1941 5.127682 TGTGTGCATCTTAGCTATTCTGAGA 59.872 40.000 0.00 0.00 41.02 3.27
530 1944 5.691305 GTGCATCTTAGCTATTCTGAGACAG 59.309 44.000 0.00 0.00 39.80 3.51
546 1960 1.661112 GACAGGTGTCGCTCTTTATGC 59.339 52.381 0.00 0.00 35.12 3.14
555 1969 5.292101 GTGTCGCTCTTTATGCTTTGTATCT 59.708 40.000 0.00 0.00 0.00 1.98
557 1971 5.292101 GTCGCTCTTTATGCTTTGTATCTGT 59.708 40.000 0.00 0.00 0.00 3.41
597 2011 9.691362 TTGAGTTAATAAAAGCATCCTTTGTTC 57.309 29.630 0.00 0.00 40.30 3.18
598 2012 8.855110 TGAGTTAATAAAAGCATCCTTTGTTCA 58.145 29.630 0.00 0.00 40.30 3.18
600 2014 9.696917 AGTTAATAAAAGCATCCTTTGTTCAAG 57.303 29.630 0.00 0.00 40.30 3.02
604 2018 9.612066 AATAAAAGCATCCTTTGTTCAAGAAAA 57.388 25.926 0.00 0.00 40.30 2.29
671 2092 1.182667 GGCCTCCCTTGCGTTAATTT 58.817 50.000 0.00 0.00 0.00 1.82
674 2095 3.383505 GGCCTCCCTTGCGTTAATTTAAT 59.616 43.478 0.00 0.00 0.00 1.40
723 2152 5.286082 GTGCGACTATTAAAACCAGCAAATG 59.714 40.000 0.00 0.00 35.05 2.32
753 2191 2.431782 ACACAGCTTTCATGGTGCTTTT 59.568 40.909 5.51 0.00 38.84 2.27
760 2198 2.530460 TCATGGTGCTTTTGGGCTAT 57.470 45.000 0.00 0.00 0.00 2.97
772 2218 6.267242 TGCTTTTGGGCTATTATCATATTGCA 59.733 34.615 0.00 0.00 0.00 4.08
935 2393 6.674419 AGGAGACCAATGATCCTTTAACTACT 59.326 38.462 0.00 0.00 40.65 2.57
967 2426 0.608856 TTGATGCGCCATGTTCCTGT 60.609 50.000 4.18 0.00 0.00 4.00
978 2437 1.967319 TGTTCCTGTCCAACAGCTTC 58.033 50.000 1.49 0.00 44.63 3.86
1101 2586 3.070302 ACAGAGAGAAGAACAAGACCACC 59.930 47.826 0.00 0.00 0.00 4.61
1219 2704 1.811359 ACTACTTCGTTCAGTCGGAGG 59.189 52.381 0.00 0.00 40.36 4.30
1221 2706 1.446272 CTTCGTTCAGTCGGAGGCC 60.446 63.158 0.00 0.00 33.31 5.19
1224 2709 1.079127 CGTTCAGTCGGAGGCCAAT 60.079 57.895 5.01 0.00 0.00 3.16
1299 2784 0.609957 TCTCCGGCCTTGTCTACGAA 60.610 55.000 0.00 0.00 0.00 3.85
1324 3092 6.431198 TCGGTAACTATTTGCTTCCATTTC 57.569 37.500 0.00 0.00 0.00 2.17
1330 3098 7.732222 AACTATTTGCTTCCATTTCCCATTA 57.268 32.000 0.00 0.00 0.00 1.90
1331 3099 7.919385 ACTATTTGCTTCCATTTCCCATTAT 57.081 32.000 0.00 0.00 0.00 1.28
1333 3101 6.811634 ATTTGCTTCCATTTCCCATTATCA 57.188 33.333 0.00 0.00 0.00 2.15
1360 3170 4.692155 TCATGCCGTGATTGATATGCTTAG 59.308 41.667 0.00 0.00 0.00 2.18
1516 3341 4.364318 CCATCTGGGACCGAGACT 57.636 61.111 8.56 0.00 40.01 3.24
1517 3342 2.119886 CCATCTGGGACCGAGACTC 58.880 63.158 8.56 0.00 40.01 3.36
1518 3343 1.729470 CCATCTGGGACCGAGACTCG 61.729 65.000 18.08 18.08 40.01 4.18
1528 3353 2.932234 CGAGACTCGGCCACCAACT 61.932 63.158 17.27 0.00 36.00 3.16
1530 3355 0.606604 GAGACTCGGCCACCAACTAA 59.393 55.000 2.24 0.00 0.00 2.24
1532 3357 1.154197 GACTCGGCCACCAACTAAAC 58.846 55.000 2.24 0.00 0.00 2.01
1533 3358 0.470766 ACTCGGCCACCAACTAAACA 59.529 50.000 2.24 0.00 0.00 2.83
1534 3359 1.073284 ACTCGGCCACCAACTAAACAT 59.927 47.619 2.24 0.00 0.00 2.71
1535 3360 1.468520 CTCGGCCACCAACTAAACATG 59.531 52.381 2.24 0.00 0.00 3.21
1536 3361 1.202830 TCGGCCACCAACTAAACATGT 60.203 47.619 2.24 0.00 0.00 3.21
1541 3366 4.380444 GGCCACCAACTAAACATGTATGTG 60.380 45.833 0.00 0.00 41.61 3.21
1580 3409 7.482654 TTCTAATTATGCTTCTGTCCAATCG 57.517 36.000 0.00 0.00 0.00 3.34
1581 3410 6.582636 TCTAATTATGCTTCTGTCCAATCGT 58.417 36.000 0.00 0.00 0.00 3.73
1761 3594 8.863872 TTATCATCGTCTTATCACTCATAGGA 57.136 34.615 0.00 0.00 0.00 2.94
1762 3595 6.809630 TCATCGTCTTATCACTCATAGGAG 57.190 41.667 2.12 2.12 46.96 3.69
1831 3789 6.761099 ATACTACTGTTCTACACTCCACTG 57.239 41.667 0.00 0.00 0.00 3.66
1876 3834 9.616156 TTCACACATTTCCTACTACTTTTACAA 57.384 29.630 0.00 0.00 0.00 2.41
1887 3845 9.316730 CCTACTACTTTTACAAGTTGTGTTGTA 57.683 33.333 18.90 15.61 45.19 2.41
1893 3851 9.169592 ACTTTTACAAGTTGTGTTGTATGTACT 57.830 29.630 18.90 0.00 40.66 2.73
2032 4115 1.068741 GCCGGAGATTCGTATTCTGGT 59.931 52.381 5.05 0.00 39.18 4.00
2092 4175 7.326454 AGGGTACGTAGAAACTTCTTTATTCC 58.674 38.462 0.00 0.00 38.70 3.01
2114 4197 9.905713 ATTCCTGTTTCTTATTAGAATACTGCA 57.094 29.630 0.00 0.00 40.01 4.41
2115 4198 9.905713 TTCCTGTTTCTTATTAGAATACTGCAT 57.094 29.630 0.00 0.00 40.01 3.96
2116 4199 9.905713 TCCTGTTTCTTATTAGAATACTGCATT 57.094 29.630 0.00 0.00 40.01 3.56
2119 4202 9.120538 TGTTTCTTATTAGAATACTGCATTCCC 57.879 33.333 0.00 0.00 43.63 3.97
2143 4235 5.598417 CCCCTATAAAATGGAGAACTTTGGG 59.402 44.000 0.00 0.00 0.00 4.12
2147 4239 4.541973 AAAATGGAGAACTTTGGGATGC 57.458 40.909 0.00 0.00 0.00 3.91
2177 4353 8.993424 ACAACATATCTCTACTCAAATAACCCT 58.007 33.333 0.00 0.00 0.00 4.34
2178 4354 9.838339 CAACATATCTCTACTCAAATAACCCTT 57.162 33.333 0.00 0.00 0.00 3.95
2211 4387 5.374071 ACTTTAGTGTTAAACCCTCAGTGG 58.626 41.667 0.00 0.00 0.00 4.00
2232 4408 7.336931 CAGTGGTGTGCTTTAAATTACCTATCT 59.663 37.037 0.00 0.00 0.00 1.98
2239 4415 5.049612 GCTTTAAATTACCTATCTCGTGCCC 60.050 44.000 0.00 0.00 0.00 5.36
2346 4522 2.624838 AGGATGTCTTTGTGTTGCCTTG 59.375 45.455 0.00 0.00 0.00 3.61
2348 4524 2.937469 TGTCTTTGTGTTGCCTTGTG 57.063 45.000 0.00 0.00 0.00 3.33
2475 4651 5.904169 CCATAGGATGGGTCTCATATCTGAT 59.096 44.000 0.00 0.00 46.86 2.90
2478 4654 5.024785 AGGATGGGTCTCATATCTGATGAG 58.975 45.833 8.03 8.03 45.08 2.90
2502 4679 5.473931 CAATATGAGGTGTAGAGGGAATCG 58.526 45.833 0.00 0.00 0.00 3.34
2507 4684 1.603172 GGTGTAGAGGGAATCGCATCG 60.603 57.143 0.00 0.00 0.00 3.84
2585 4764 9.468532 AAATTTCTATTTTGCTCAACTTCAGAC 57.531 29.630 0.00 0.00 29.68 3.51
2640 4819 4.793071 TGAACCGAAACATACAATGCAAG 58.207 39.130 0.00 0.00 0.00 4.01
2676 4855 9.640963 GATGCGATAGATAAGGTACAATAACTT 57.359 33.333 0.00 0.00 37.70 2.66
2845 5051 1.732259 GGACGCTGTTTGACTATGGTG 59.268 52.381 0.00 0.00 0.00 4.17
2877 5083 5.124457 GCTTGGCTTGTCTGATATTTCTTCA 59.876 40.000 0.00 0.00 0.00 3.02
2901 5107 3.006323 AGTGCAGAGTTAGTGACCAAGAG 59.994 47.826 0.00 0.00 0.00 2.85
2904 5110 3.257127 GCAGAGTTAGTGACCAAGAGACT 59.743 47.826 0.00 0.00 0.00 3.24
3016 5265 1.331214 CATCTGGGCAAACAACAGGT 58.669 50.000 0.00 0.00 33.19 4.00
3066 5315 1.543871 GGAACGGTTCCTTTGTGGCTA 60.544 52.381 28.43 0.00 46.57 3.93
3110 5360 1.267574 ACCACCGACATCAGGAGCAT 61.268 55.000 0.00 0.00 0.00 3.79
3168 5421 1.395826 GGAGCCTGATCTACAGCGGT 61.396 60.000 0.00 0.00 44.52 5.68
3196 5449 1.271325 ACATGACCGTGCCTTTCATCA 60.271 47.619 0.00 0.00 0.00 3.07
3311 5582 4.752101 AGTGAGAGTTGTTCATTTTCTCCG 59.248 41.667 0.00 0.00 34.74 4.63
3321 5592 3.942829 TCATTTTCTCCGATCAGCTTGT 58.057 40.909 0.00 0.00 0.00 3.16
3481 6331 6.476378 AGTGACTGGCTAGTTTGATGTATTT 58.524 36.000 3.47 0.00 37.25 1.40
3508 6375 8.584157 ACTCTATTGTTAATTTGTCATGCCAAA 58.416 29.630 4.13 4.13 38.58 3.28
3635 6502 3.752222 GTCCTGTCTAACTCGTCTTCTCA 59.248 47.826 0.00 0.00 0.00 3.27
3704 6577 8.840200 TCAGGAAGAATACTATTCTACCACTT 57.160 34.615 11.07 0.00 0.00 3.16
3911 6784 6.076981 ACAAAAGCTATCACAAGGTTGAAG 57.923 37.500 0.00 0.00 37.28 3.02
3935 6811 9.842775 AAGACAACATAGATGATTACATGATGT 57.157 29.630 2.65 2.65 39.38 3.06
3962 6838 8.831715 TCATGCGTCACTAATCATATTAATGT 57.168 30.769 0.00 0.00 34.50 2.71
3968 6893 8.551205 CGTCACTAATCATATTAATGTGTTGCT 58.449 33.333 11.44 0.00 34.50 3.91
3970 6895 8.764287 TCACTAATCATATTAATGTGTTGCTCG 58.236 33.333 11.44 0.27 34.50 5.03
3977 6902 7.648112 TCATATTAATGTGTTGCTCGTAGAGTC 59.352 37.037 11.44 0.00 44.59 3.36
3993 6918 1.658717 GTCCATGGACGCTCGATCG 60.659 63.158 28.52 9.36 35.30 3.69
4001 6926 3.242268 ACGCTCGATCGTCATCTTG 57.758 52.632 15.94 2.22 38.44 3.02
4006 6931 0.248498 TCGATCGTCATCTTGCCGAC 60.248 55.000 15.94 0.00 32.86 4.79
4014 6939 2.115427 TCATCTTGCCGACCATAGGAA 58.885 47.619 0.00 0.00 0.00 3.36
4025 6950 3.378112 CGACCATAGGAACACATGCAAAT 59.622 43.478 0.00 0.00 0.00 2.32
4027 6952 4.343231 ACCATAGGAACACATGCAAATCA 58.657 39.130 0.00 0.00 0.00 2.57
4029 6954 5.422970 ACCATAGGAACACATGCAAATCAAT 59.577 36.000 0.00 0.00 0.00 2.57
4031 6956 7.123997 ACCATAGGAACACATGCAAATCAATTA 59.876 33.333 0.00 0.00 0.00 1.40
4033 6958 6.594788 AGGAACACATGCAAATCAATTAGT 57.405 33.333 0.00 0.00 0.00 2.24
4035 6960 6.869913 AGGAACACATGCAAATCAATTAGTTG 59.130 34.615 0.00 0.00 36.25 3.16
4048 6973 6.569179 TCAATTAGTTGCCCTAAAGTCAAC 57.431 37.500 0.00 0.00 39.07 3.18
4050 6975 6.206634 TCAATTAGTTGCCCTAAAGTCAACTG 59.793 38.462 17.76 8.08 46.69 3.16
4051 6976 2.863809 AGTTGCCCTAAAGTCAACTGG 58.136 47.619 11.61 0.00 45.88 4.00
4057 6982 3.496160 GCCCTAAAGTCAACTGGAGTTCA 60.496 47.826 0.00 0.00 38.22 3.18
4066 6991 3.138283 TCAACTGGAGTTCAGGTTCCAAT 59.862 43.478 2.79 0.00 41.45 3.16
4067 6992 3.891366 CAACTGGAGTTCAGGTTCCAATT 59.109 43.478 2.79 0.00 41.45 2.32
4068 6993 3.891366 AACTGGAGTTCAGGTTCCAATTG 59.109 43.478 2.79 0.00 41.45 2.32
4070 6995 2.238521 GGAGTTCAGGTTCCAATTGCA 58.761 47.619 0.00 0.00 33.55 4.08
4082 7007 3.620488 TCCAATTGCAGTCCATTACCTC 58.380 45.455 0.00 0.00 0.00 3.85
4086 7011 1.883084 GCAGTCCATTACCTCGCGG 60.883 63.158 6.13 0.00 0.00 6.46
4093 7018 0.249322 CATTACCTCGCGGACGGAAT 60.249 55.000 6.13 0.00 40.63 3.01
4097 7022 2.183300 CTCGCGGACGGAATTCCA 59.817 61.111 24.09 1.77 40.63 3.53
4099 7024 3.550992 CGCGGACGGAATTCCACG 61.551 66.667 24.09 22.86 35.04 4.94
4102 7027 1.813753 CGGACGGAATTCCACGCAT 60.814 57.895 24.09 3.73 35.04 4.73
4121 7046 1.873698 TAACGAGCAAACTCACACCC 58.126 50.000 0.00 0.00 43.66 4.61
4124 7050 1.021202 CGAGCAAACTCACACCCAAA 58.979 50.000 0.00 0.00 43.66 3.28
4130 7056 5.783111 AGCAAACTCACACCCAAAAATATC 58.217 37.500 0.00 0.00 0.00 1.63
4146 7072 4.342862 AATATCTGGTGTTCATCCTCCG 57.657 45.455 0.00 0.00 0.00 4.63
4172 7098 3.705638 CACACTGCACACGAGCCG 61.706 66.667 0.00 0.00 0.00 5.52
4174 7100 2.967076 CACTGCACACGAGCCGTT 60.967 61.111 0.00 0.00 38.32 4.44
4206 7132 0.592247 GCGATTGGCCATGTTAAGCG 60.592 55.000 6.09 7.03 36.42 4.68
4211 7788 0.392461 TGGCCATGTTAAGCGAGGAC 60.392 55.000 0.00 0.00 0.00 3.85
4273 7850 0.772124 TGAGGGGAAGGGCAGTCTTT 60.772 55.000 0.00 0.00 0.00 2.52
4288 7865 5.636543 GGCAGTCTTTCAAAGGAATTTCATG 59.363 40.000 0.00 0.00 31.93 3.07
4289 7866 5.119743 GCAGTCTTTCAAAGGAATTTCATGC 59.880 40.000 0.00 0.00 31.93 4.06
4296 7873 4.771577 TCAAAGGAATTTCATGCTAGCCAA 59.228 37.500 13.29 0.00 0.00 4.52
4337 7914 7.036220 CAGCTATGTATAGAGGGATTTAACCG 58.964 42.308 3.15 0.00 32.05 4.44
4341 7918 7.850935 ATGTATAGAGGGATTTAACCGAGAA 57.149 36.000 0.00 0.00 0.00 2.87
4345 7922 5.693769 AGAGGGATTTAACCGAGAATTGA 57.306 39.130 0.00 0.00 0.00 2.57
4347 7924 4.524053 AGGGATTTAACCGAGAATTGACC 58.476 43.478 0.00 0.00 0.00 4.02
4348 7925 4.227527 AGGGATTTAACCGAGAATTGACCT 59.772 41.667 0.00 0.00 0.00 3.85
4349 7926 5.427481 AGGGATTTAACCGAGAATTGACCTA 59.573 40.000 0.00 0.00 0.00 3.08
4357 7934 4.656112 ACCGAGAATTGACCTAAGGATGAT 59.344 41.667 0.00 0.00 0.00 2.45
4359 7936 6.498651 ACCGAGAATTGACCTAAGGATGATAT 59.501 38.462 0.00 0.00 0.00 1.63
4366 7943 4.598807 TGACCTAAGGATGATATGTGCCAT 59.401 41.667 0.00 0.00 0.00 4.40
4402 8083 4.589908 ACTCATTGGAGATTTGTGTACCC 58.410 43.478 0.00 0.00 44.26 3.69
4411 8092 0.691332 TTTGTGTACCCGCCACCATA 59.309 50.000 0.00 0.00 31.71 2.74
4417 8098 0.691332 TACCCGCCACCATAACACAA 59.309 50.000 0.00 0.00 0.00 3.33
4430 8111 5.048991 ACCATAACACAACGAAGATTCCAAC 60.049 40.000 0.00 0.00 0.00 3.77
4447 8128 4.766404 CCAACTGTTGGCTTTAGTTAGG 57.234 45.455 25.21 0.00 45.17 2.69
4450 8131 5.278315 CCAACTGTTGGCTTTAGTTAGGAAC 60.278 44.000 25.21 0.00 45.17 3.62
4457 8138 6.182507 TGGCTTTAGTTAGGAACAAAGAGA 57.817 37.500 13.58 2.74 34.43 3.10
4458 8139 6.231211 TGGCTTTAGTTAGGAACAAAGAGAG 58.769 40.000 13.58 0.00 34.43 3.20
4459 8140 6.183361 TGGCTTTAGTTAGGAACAAAGAGAGT 60.183 38.462 13.58 0.00 34.43 3.24
4461 8142 6.369340 GCTTTAGTTAGGAACAAAGAGAGTCC 59.631 42.308 13.58 0.00 34.43 3.85
4464 8145 5.612351 AGTTAGGAACAAAGAGAGTCCAAC 58.388 41.667 0.00 0.00 0.00 3.77
4465 8146 5.130477 AGTTAGGAACAAAGAGAGTCCAACA 59.870 40.000 0.00 0.00 0.00 3.33
4466 8147 4.078639 AGGAACAAAGAGAGTCCAACAG 57.921 45.455 0.00 0.00 0.00 3.16
4467 8148 2.550180 GGAACAAAGAGAGTCCAACAGC 59.450 50.000 0.00 0.00 0.00 4.40
4468 8149 3.206150 GAACAAAGAGAGTCCAACAGCA 58.794 45.455 0.00 0.00 0.00 4.41
4469 8150 2.843701 ACAAAGAGAGTCCAACAGCAG 58.156 47.619 0.00 0.00 0.00 4.24
4473 8154 0.952984 GAGAGTCCAACAGCAGTGGC 60.953 60.000 0.00 0.00 41.61 5.01
4475 8156 1.228063 AGTCCAACAGCAGTGGCAG 60.228 57.895 0.00 0.00 44.61 4.85
4476 8157 2.113774 TCCAACAGCAGTGGCAGG 59.886 61.111 0.00 0.00 44.61 4.85
4477 8158 2.203394 CCAACAGCAGTGGCAGGT 60.203 61.111 0.00 0.00 44.61 4.00
4478 8159 2.558286 CCAACAGCAGTGGCAGGTG 61.558 63.158 4.59 4.59 43.25 4.00
4480 8161 4.962836 ACAGCAGTGGCAGGTGGC 62.963 66.667 10.18 0.00 44.61 5.01
4484 8165 2.360350 CAGTGGCAGGTGGCGATT 60.360 61.111 0.00 0.00 46.16 3.34
4486 8167 2.359850 GTGGCAGGTGGCGATTGA 60.360 61.111 0.00 0.00 46.16 2.57
4487 8168 2.359850 TGGCAGGTGGCGATTGAC 60.360 61.111 0.00 0.00 46.16 3.18
4488 8169 2.045926 GGCAGGTGGCGATTGACT 60.046 61.111 0.00 0.00 46.16 3.41
4491 8172 1.009829 GCAGGTGGCGATTGACTAAG 58.990 55.000 0.00 0.00 0.00 2.18
4492 8173 1.656652 CAGGTGGCGATTGACTAAGG 58.343 55.000 0.00 0.00 0.00 2.69
4493 8174 0.541863 AGGTGGCGATTGACTAAGGG 59.458 55.000 0.00 0.00 0.00 3.95
4494 8175 1.095807 GGTGGCGATTGACTAAGGGC 61.096 60.000 0.00 0.00 0.00 5.19
4495 8176 1.095807 GTGGCGATTGACTAAGGGCC 61.096 60.000 0.00 0.00 38.12 5.80
4496 8177 1.271840 TGGCGATTGACTAAGGGCCT 61.272 55.000 0.00 0.00 38.32 5.19
4498 8179 0.876342 GCGATTGACTAAGGGCCTCG 60.876 60.000 6.46 4.61 0.00 4.63
4499 8180 0.249489 CGATTGACTAAGGGCCTCGG 60.249 60.000 6.46 5.20 0.00 4.63
4500 8181 0.533085 GATTGACTAAGGGCCTCGGC 60.533 60.000 6.46 3.66 41.06 5.54
4501 8182 2.311688 ATTGACTAAGGGCCTCGGCG 62.312 60.000 6.46 0.00 43.06 6.46
4502 8183 4.222847 GACTAAGGGCCTCGGCGG 62.223 72.222 6.46 0.00 43.06 6.13
4515 8196 2.262915 GGCGGCCGAGATATCTGG 59.737 66.667 33.48 9.05 0.00 3.86
4516 8197 2.276116 GGCGGCCGAGATATCTGGA 61.276 63.158 33.48 0.00 0.00 3.86
4517 8198 1.608717 GGCGGCCGAGATATCTGGAT 61.609 60.000 33.48 0.00 0.00 3.41
4518 8199 1.103803 GCGGCCGAGATATCTGGATA 58.896 55.000 33.48 0.00 0.00 2.59
4519 8200 1.202313 GCGGCCGAGATATCTGGATAC 60.202 57.143 33.48 0.62 0.00 2.24
4521 8202 2.159366 CGGCCGAGATATCTGGATACAC 60.159 54.545 24.07 0.00 46.17 2.90
4522 8203 2.166664 GGCCGAGATATCTGGATACACC 59.833 54.545 15.67 7.42 46.17 4.16
4523 8204 2.826128 GCCGAGATATCTGGATACACCA 59.174 50.000 15.67 0.00 46.17 4.17
4524 8205 3.367498 GCCGAGATATCTGGATACACCAC 60.367 52.174 15.67 0.00 46.17 4.16
4526 8207 4.280929 CCGAGATATCTGGATACACCACAA 59.719 45.833 15.67 0.00 46.17 3.33
4527 8208 5.047021 CCGAGATATCTGGATACACCACAAT 60.047 44.000 15.67 0.00 46.17 2.71
4528 8209 5.866092 CGAGATATCTGGATACACCACAATG 59.134 44.000 10.74 0.00 46.17 2.82
4529 8210 6.119240 AGATATCTGGATACACCACAATGG 57.881 41.667 3.89 0.00 46.17 3.16
4531 8212 1.016627 CTGGATACACCACAATGGCG 58.983 55.000 0.00 0.00 46.17 5.69
4533 8214 1.555533 TGGATACACCACAATGGCGTA 59.444 47.619 0.00 0.00 46.17 4.42
4534 8215 2.210116 GGATACACCACAATGGCGTAG 58.790 52.381 2.49 0.00 42.67 3.51
4535 8216 2.159014 GGATACACCACAATGGCGTAGA 60.159 50.000 2.49 0.00 42.67 2.59
4537 8218 0.036388 ACACCACAATGGCGTAGAGG 60.036 55.000 0.00 0.00 42.67 3.69
4543 8224 1.066143 ACAATGGCGTAGAGGTCCTTG 60.066 52.381 0.00 0.00 0.00 3.61
4544 8225 1.207089 CAATGGCGTAGAGGTCCTTGA 59.793 52.381 0.00 0.00 0.00 3.02
4545 8226 1.568504 ATGGCGTAGAGGTCCTTGAA 58.431 50.000 0.00 0.00 0.00 2.69
4546 8227 1.568504 TGGCGTAGAGGTCCTTGAAT 58.431 50.000 0.00 0.00 0.00 2.57
4547 8228 1.480954 TGGCGTAGAGGTCCTTGAATC 59.519 52.381 0.00 0.00 0.00 2.52
4548 8229 1.757699 GGCGTAGAGGTCCTTGAATCT 59.242 52.381 0.00 0.00 0.00 2.40
4549 8230 2.223852 GGCGTAGAGGTCCTTGAATCTC 60.224 54.545 0.00 0.00 0.00 2.75
4550 8231 2.691011 GCGTAGAGGTCCTTGAATCTCT 59.309 50.000 0.00 0.00 39.57 3.10
4551 8232 3.490078 GCGTAGAGGTCCTTGAATCTCTG 60.490 52.174 0.00 0.00 37.21 3.35
4552 8233 3.490078 CGTAGAGGTCCTTGAATCTCTGC 60.490 52.174 0.00 0.00 37.21 4.26
4553 8234 2.831565 AGAGGTCCTTGAATCTCTGCT 58.168 47.619 0.00 0.00 35.52 4.24
4554 8235 3.987745 AGAGGTCCTTGAATCTCTGCTA 58.012 45.455 0.00 0.00 35.52 3.49
4555 8236 3.960102 AGAGGTCCTTGAATCTCTGCTAG 59.040 47.826 0.00 0.00 35.52 3.42
4556 8237 3.957497 GAGGTCCTTGAATCTCTGCTAGA 59.043 47.826 0.00 0.00 39.02 2.43
4557 8238 3.960102 AGGTCCTTGAATCTCTGCTAGAG 59.040 47.826 0.00 6.79 43.64 2.43
4567 8248 4.527509 TCTCTGCTAGAGAGGTTTTGTG 57.472 45.455 15.09 0.00 45.77 3.33
4568 8249 2.999355 CTCTGCTAGAGAGGTTTTGTGC 59.001 50.000 7.22 0.00 45.07 4.57
4569 8250 2.079925 CTGCTAGAGAGGTTTTGTGCC 58.920 52.381 0.00 0.00 0.00 5.01
4570 8251 1.419762 TGCTAGAGAGGTTTTGTGCCA 59.580 47.619 0.00 0.00 0.00 4.92
4571 8252 2.158682 TGCTAGAGAGGTTTTGTGCCAA 60.159 45.455 0.00 0.00 0.00 4.52
4572 8253 2.226674 GCTAGAGAGGTTTTGTGCCAAC 59.773 50.000 0.00 0.00 0.00 3.77
4573 8254 1.692411 AGAGAGGTTTTGTGCCAACC 58.308 50.000 0.00 0.00 43.73 3.77
4574 8255 0.673985 GAGAGGTTTTGTGCCAACCC 59.326 55.000 0.00 0.00 44.38 4.11
4575 8256 0.032615 AGAGGTTTTGTGCCAACCCA 60.033 50.000 0.00 0.00 44.38 4.51
4577 8258 0.829990 AGGTTTTGTGCCAACCCAAG 59.170 50.000 0.00 0.00 44.38 3.61
4578 8259 0.827368 GGTTTTGTGCCAACCCAAGA 59.173 50.000 0.00 0.00 38.23 3.02
4579 8260 1.208293 GGTTTTGTGCCAACCCAAGAA 59.792 47.619 0.00 0.00 38.23 2.52
4580 8261 2.276201 GTTTTGTGCCAACCCAAGAAC 58.724 47.619 0.00 0.00 0.00 3.01
4583 8264 0.324738 TGTGCCAACCCAAGAACCAA 60.325 50.000 0.00 0.00 0.00 3.67
4584 8265 0.827368 GTGCCAACCCAAGAACCAAA 59.173 50.000 0.00 0.00 0.00 3.28
4585 8266 0.827368 TGCCAACCCAAGAACCAAAC 59.173 50.000 0.00 0.00 0.00 2.93
4586 8267 0.105964 GCCAACCCAAGAACCAAACC 59.894 55.000 0.00 0.00 0.00 3.27
4587 8268 1.490574 CCAACCCAAGAACCAAACCA 58.509 50.000 0.00 0.00 0.00 3.67
4588 8269 1.834263 CCAACCCAAGAACCAAACCAA 59.166 47.619 0.00 0.00 0.00 3.67
4589 8270 2.237392 CCAACCCAAGAACCAAACCAAA 59.763 45.455 0.00 0.00 0.00 3.28
4590 8271 3.307762 CCAACCCAAGAACCAAACCAAAA 60.308 43.478 0.00 0.00 0.00 2.44
4591 8272 4.522114 CAACCCAAGAACCAAACCAAAAT 58.478 39.130 0.00 0.00 0.00 1.82
4592 8273 4.853468 ACCCAAGAACCAAACCAAAATT 57.147 36.364 0.00 0.00 0.00 1.82
4593 8274 5.186256 ACCCAAGAACCAAACCAAAATTT 57.814 34.783 0.00 0.00 0.00 1.82
4594 8275 6.314899 ACCCAAGAACCAAACCAAAATTTA 57.685 33.333 0.00 0.00 0.00 1.40
4595 8276 6.353323 ACCCAAGAACCAAACCAAAATTTAG 58.647 36.000 0.00 0.00 0.00 1.85
4597 8278 5.238432 CCAAGAACCAAACCAAAATTTAGCC 59.762 40.000 0.00 0.00 0.00 3.93
4598 8279 5.887214 AGAACCAAACCAAAATTTAGCCT 57.113 34.783 0.00 0.00 0.00 4.58
4599 8280 6.987403 AGAACCAAACCAAAATTTAGCCTA 57.013 33.333 0.00 0.00 0.00 3.93
4601 8282 5.147330 ACCAAACCAAAATTTAGCCTAGC 57.853 39.130 0.00 0.00 0.00 3.42
4602 8283 4.020573 ACCAAACCAAAATTTAGCCTAGCC 60.021 41.667 0.00 0.00 0.00 3.93
4603 8284 4.173256 CAAACCAAAATTTAGCCTAGCCG 58.827 43.478 0.00 0.00 0.00 5.52
4604 8285 1.749063 ACCAAAATTTAGCCTAGCCGC 59.251 47.619 0.00 0.00 0.00 6.53
4605 8286 2.024414 CCAAAATTTAGCCTAGCCGCT 58.976 47.619 0.00 0.00 43.09 5.52
4606 8287 2.223572 CCAAAATTTAGCCTAGCCGCTG 60.224 50.000 2.16 0.00 40.08 5.18
4608 8289 2.420058 AATTTAGCCTAGCCGCTGTT 57.580 45.000 2.16 0.00 40.08 3.16
4609 8290 1.668419 ATTTAGCCTAGCCGCTGTTG 58.332 50.000 2.16 0.00 40.08 3.33
4610 8291 0.323629 TTTAGCCTAGCCGCTGTTGT 59.676 50.000 2.16 0.00 40.08 3.32
4612 8293 1.254975 TAGCCTAGCCGCTGTTGTGA 61.255 55.000 2.16 0.00 40.08 3.58
4613 8294 1.671054 GCCTAGCCGCTGTTGTGAA 60.671 57.895 2.16 0.00 0.00 3.18
4614 8295 1.912371 GCCTAGCCGCTGTTGTGAAC 61.912 60.000 2.16 0.00 0.00 3.18
4615 8296 1.626654 CCTAGCCGCTGTTGTGAACG 61.627 60.000 2.16 0.00 0.00 3.95
4617 8298 0.531090 TAGCCGCTGTTGTGAACGTT 60.531 50.000 0.00 0.00 0.00 3.99
4619 8300 2.010670 CCGCTGTTGTGAACGTTGA 58.989 52.632 5.00 0.00 0.00 3.18
4620 8301 0.375454 CCGCTGTTGTGAACGTTGAA 59.625 50.000 5.00 0.00 0.00 2.69
4621 8302 1.452717 CGCTGTTGTGAACGTTGAAC 58.547 50.000 5.00 4.48 0.00 3.18
4622 8303 1.062002 CGCTGTTGTGAACGTTGAACT 59.938 47.619 5.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 5.759273 GCATTTTGGCAATATTGAAGGCATA 59.241 36.000 19.73 3.54 37.67 3.14
23 24 3.940221 GCATTTTGGCAATATTGAAGGCA 59.060 39.130 19.73 7.97 35.94 4.75
120 121 8.034804 AGAAAATACACAATAAATTCTGGCACC 58.965 33.333 0.00 0.00 0.00 5.01
201 202 2.494870 GCATTGCATCTCTTCTGGGTTT 59.505 45.455 3.15 0.00 0.00 3.27
202 203 2.097825 GCATTGCATCTCTTCTGGGTT 58.902 47.619 3.15 0.00 0.00 4.11
232 1646 3.756434 AGCGTGCCATACTGTACAAATTT 59.244 39.130 0.00 0.00 0.00 1.82
248 1662 0.094730 CGCAACTAAACCTAGCGTGC 59.905 55.000 0.00 0.00 43.08 5.34
252 1666 1.661112 CAGCTCGCAACTAAACCTAGC 59.339 52.381 0.00 0.00 0.00 3.42
253 1667 2.960819 ACAGCTCGCAACTAAACCTAG 58.039 47.619 0.00 0.00 0.00 3.02
254 1668 3.064207 CAACAGCTCGCAACTAAACCTA 58.936 45.455 0.00 0.00 0.00 3.08
255 1669 1.873591 CAACAGCTCGCAACTAAACCT 59.126 47.619 0.00 0.00 0.00 3.50
256 1670 1.871039 TCAACAGCTCGCAACTAAACC 59.129 47.619 0.00 0.00 0.00 3.27
257 1671 3.545633 CTTCAACAGCTCGCAACTAAAC 58.454 45.455 0.00 0.00 0.00 2.01
258 1672 2.548057 CCTTCAACAGCTCGCAACTAAA 59.452 45.455 0.00 0.00 0.00 1.85
259 1673 2.143122 CCTTCAACAGCTCGCAACTAA 58.857 47.619 0.00 0.00 0.00 2.24
260 1674 1.070134 ACCTTCAACAGCTCGCAACTA 59.930 47.619 0.00 0.00 0.00 2.24
261 1675 0.179045 ACCTTCAACAGCTCGCAACT 60.179 50.000 0.00 0.00 0.00 3.16
262 1676 0.040958 CACCTTCAACAGCTCGCAAC 60.041 55.000 0.00 0.00 0.00 4.17
263 1677 0.179059 TCACCTTCAACAGCTCGCAA 60.179 50.000 0.00 0.00 0.00 4.85
264 1678 0.179059 TTCACCTTCAACAGCTCGCA 60.179 50.000 0.00 0.00 0.00 5.10
265 1679 1.160137 ATTCACCTTCAACAGCTCGC 58.840 50.000 0.00 0.00 0.00 5.03
266 1680 2.345641 CGTATTCACCTTCAACAGCTCG 59.654 50.000 0.00 0.00 0.00 5.03
267 1681 3.585862 TCGTATTCACCTTCAACAGCTC 58.414 45.455 0.00 0.00 0.00 4.09
268 1682 3.678056 TCGTATTCACCTTCAACAGCT 57.322 42.857 0.00 0.00 0.00 4.24
269 1683 3.063997 CCATCGTATTCACCTTCAACAGC 59.936 47.826 0.00 0.00 0.00 4.40
270 1684 4.093408 CACCATCGTATTCACCTTCAACAG 59.907 45.833 0.00 0.00 0.00 3.16
271 1685 4.000325 CACCATCGTATTCACCTTCAACA 59.000 43.478 0.00 0.00 0.00 3.33
272 1686 3.374058 CCACCATCGTATTCACCTTCAAC 59.626 47.826 0.00 0.00 0.00 3.18
273 1687 3.008594 ACCACCATCGTATTCACCTTCAA 59.991 43.478 0.00 0.00 0.00 2.69
274 1688 2.569853 ACCACCATCGTATTCACCTTCA 59.430 45.455 0.00 0.00 0.00 3.02
275 1689 3.195661 GACCACCATCGTATTCACCTTC 58.804 50.000 0.00 0.00 0.00 3.46
276 1690 2.569853 TGACCACCATCGTATTCACCTT 59.430 45.455 0.00 0.00 0.00 3.50
277 1691 2.184533 TGACCACCATCGTATTCACCT 58.815 47.619 0.00 0.00 0.00 4.00
278 1692 2.684001 TGACCACCATCGTATTCACC 57.316 50.000 0.00 0.00 0.00 4.02
279 1693 4.250464 TCTTTGACCACCATCGTATTCAC 58.750 43.478 0.00 0.00 0.00 3.18
280 1694 4.545208 TCTTTGACCACCATCGTATTCA 57.455 40.909 0.00 0.00 0.00 2.57
281 1695 5.873179 TTTCTTTGACCACCATCGTATTC 57.127 39.130 0.00 0.00 0.00 1.75
282 1696 7.931578 TTATTTCTTTGACCACCATCGTATT 57.068 32.000 0.00 0.00 0.00 1.89
283 1697 9.793259 ATATTATTTCTTTGACCACCATCGTAT 57.207 29.630 0.00 0.00 0.00 3.06
285 1699 9.621629 TTATATTATTTCTTTGACCACCATCGT 57.378 29.630 0.00 0.00 0.00 3.73
286 1700 9.878599 GTTATATTATTTCTTTGACCACCATCG 57.121 33.333 0.00 0.00 0.00 3.84
287 1701 9.878599 CGTTATATTATTTCTTTGACCACCATC 57.121 33.333 0.00 0.00 0.00 3.51
288 1702 9.621629 TCGTTATATTATTTCTTTGACCACCAT 57.378 29.630 0.00 0.00 0.00 3.55
289 1703 9.451002 TTCGTTATATTATTTCTTTGACCACCA 57.549 29.630 0.00 0.00 0.00 4.17
290 1704 9.931210 CTTCGTTATATTATTTCTTTGACCACC 57.069 33.333 0.00 0.00 0.00 4.61
298 1712 9.886132 ACACAGGACTTCGTTATATTATTTCTT 57.114 29.630 0.00 0.00 0.00 2.52
299 1713 9.886132 AACACAGGACTTCGTTATATTATTTCT 57.114 29.630 0.00 0.00 0.00 2.52
304 1718 9.577110 CAACTAACACAGGACTTCGTTATATTA 57.423 33.333 0.00 0.00 0.00 0.98
305 1719 7.064253 GCAACTAACACAGGACTTCGTTATATT 59.936 37.037 0.00 0.00 0.00 1.28
306 1720 6.534079 GCAACTAACACAGGACTTCGTTATAT 59.466 38.462 0.00 0.00 0.00 0.86
307 1721 5.865552 GCAACTAACACAGGACTTCGTTATA 59.134 40.000 0.00 0.00 0.00 0.98
308 1722 4.689345 GCAACTAACACAGGACTTCGTTAT 59.311 41.667 0.00 0.00 0.00 1.89
309 1723 4.053295 GCAACTAACACAGGACTTCGTTA 58.947 43.478 0.00 0.00 0.00 3.18
310 1724 2.870411 GCAACTAACACAGGACTTCGTT 59.130 45.455 0.00 0.00 0.00 3.85
311 1725 2.480845 GCAACTAACACAGGACTTCGT 58.519 47.619 0.00 0.00 0.00 3.85
312 1726 1.455786 CGCAACTAACACAGGACTTCG 59.544 52.381 0.00 0.00 0.00 3.79
313 1727 2.731976 CTCGCAACTAACACAGGACTTC 59.268 50.000 0.00 0.00 0.00 3.01
314 1728 2.755650 CTCGCAACTAACACAGGACTT 58.244 47.619 0.00 0.00 0.00 3.01
315 1729 1.605712 GCTCGCAACTAACACAGGACT 60.606 52.381 0.00 0.00 0.00 3.85
316 1730 0.790814 GCTCGCAACTAACACAGGAC 59.209 55.000 0.00 0.00 0.00 3.85
317 1731 0.679505 AGCTCGCAACTAACACAGGA 59.320 50.000 0.00 0.00 0.00 3.86
318 1732 0.792640 CAGCTCGCAACTAACACAGG 59.207 55.000 0.00 0.00 0.00 4.00
319 1733 1.502231 ACAGCTCGCAACTAACACAG 58.498 50.000 0.00 0.00 0.00 3.66
320 1734 1.597195 CAACAGCTCGCAACTAACACA 59.403 47.619 0.00 0.00 0.00 3.72
321 1735 1.864711 TCAACAGCTCGCAACTAACAC 59.135 47.619 0.00 0.00 0.00 3.32
322 1736 2.135139 CTCAACAGCTCGCAACTAACA 58.865 47.619 0.00 0.00 0.00 2.41
323 1737 1.461127 CCTCAACAGCTCGCAACTAAC 59.539 52.381 0.00 0.00 0.00 2.34
324 1738 1.070134 ACCTCAACAGCTCGCAACTAA 59.930 47.619 0.00 0.00 0.00 2.24
325 1739 0.679505 ACCTCAACAGCTCGCAACTA 59.320 50.000 0.00 0.00 0.00 2.24
326 1740 0.882042 CACCTCAACAGCTCGCAACT 60.882 55.000 0.00 0.00 0.00 3.16
327 1741 0.880278 TCACCTCAACAGCTCGCAAC 60.880 55.000 0.00 0.00 0.00 4.17
328 1742 0.179059 TTCACCTCAACAGCTCGCAA 60.179 50.000 0.00 0.00 0.00 4.85
329 1743 0.035317 ATTCACCTCAACAGCTCGCA 59.965 50.000 0.00 0.00 0.00 5.10
330 1744 1.661112 GTATTCACCTCAACAGCTCGC 59.339 52.381 0.00 0.00 0.00 5.03
331 1745 1.920574 CGTATTCACCTCAACAGCTCG 59.079 52.381 0.00 0.00 0.00 5.03
332 1746 3.232213 TCGTATTCACCTCAACAGCTC 57.768 47.619 0.00 0.00 0.00 4.09
333 1747 3.055819 ACATCGTATTCACCTCAACAGCT 60.056 43.478 0.00 0.00 0.00 4.24
334 1748 3.062639 CACATCGTATTCACCTCAACAGC 59.937 47.826 0.00 0.00 0.00 4.40
335 1749 4.494484 TCACATCGTATTCACCTCAACAG 58.506 43.478 0.00 0.00 0.00 3.16
336 1750 4.219725 TCTCACATCGTATTCACCTCAACA 59.780 41.667 0.00 0.00 0.00 3.33
337 1751 4.563184 GTCTCACATCGTATTCACCTCAAC 59.437 45.833 0.00 0.00 0.00 3.18
338 1752 4.462834 AGTCTCACATCGTATTCACCTCAA 59.537 41.667 0.00 0.00 0.00 3.02
339 1753 4.017126 AGTCTCACATCGTATTCACCTCA 58.983 43.478 0.00 0.00 0.00 3.86
340 1754 4.640789 AGTCTCACATCGTATTCACCTC 57.359 45.455 0.00 0.00 0.00 3.85
341 1755 4.462834 TCAAGTCTCACATCGTATTCACCT 59.537 41.667 0.00 0.00 0.00 4.00
342 1756 4.744570 TCAAGTCTCACATCGTATTCACC 58.255 43.478 0.00 0.00 0.00 4.02
343 1757 5.641709 TCTCAAGTCTCACATCGTATTCAC 58.358 41.667 0.00 0.00 0.00 3.18
344 1758 5.897377 TCTCAAGTCTCACATCGTATTCA 57.103 39.130 0.00 0.00 0.00 2.57
345 1759 6.254589 CCTTTCTCAAGTCTCACATCGTATTC 59.745 42.308 0.00 0.00 0.00 1.75
346 1760 6.102663 CCTTTCTCAAGTCTCACATCGTATT 58.897 40.000 0.00 0.00 0.00 1.89
347 1761 5.186021 ACCTTTCTCAAGTCTCACATCGTAT 59.814 40.000 0.00 0.00 0.00 3.06
348 1762 4.523173 ACCTTTCTCAAGTCTCACATCGTA 59.477 41.667 0.00 0.00 0.00 3.43
349 1763 3.322254 ACCTTTCTCAAGTCTCACATCGT 59.678 43.478 0.00 0.00 0.00 3.73
350 1764 3.677121 CACCTTTCTCAAGTCTCACATCG 59.323 47.826 0.00 0.00 0.00 3.84
351 1765 4.887748 TCACCTTTCTCAAGTCTCACATC 58.112 43.478 0.00 0.00 0.00 3.06
352 1766 4.963318 TCACCTTTCTCAAGTCTCACAT 57.037 40.909 0.00 0.00 0.00 3.21
353 1767 4.081142 TGTTCACCTTTCTCAAGTCTCACA 60.081 41.667 0.00 0.00 0.00 3.58
354 1768 4.442706 TGTTCACCTTTCTCAAGTCTCAC 58.557 43.478 0.00 0.00 0.00 3.51
355 1769 4.443457 CCTGTTCACCTTTCTCAAGTCTCA 60.443 45.833 0.00 0.00 0.00 3.27
356 1770 4.061596 CCTGTTCACCTTTCTCAAGTCTC 58.938 47.826 0.00 0.00 0.00 3.36
357 1771 3.711704 TCCTGTTCACCTTTCTCAAGTCT 59.288 43.478 0.00 0.00 0.00 3.24
358 1772 3.810386 GTCCTGTTCACCTTTCTCAAGTC 59.190 47.826 0.00 0.00 0.00 3.01
359 1773 3.456277 AGTCCTGTTCACCTTTCTCAAGT 59.544 43.478 0.00 0.00 0.00 3.16
360 1774 3.812053 CAGTCCTGTTCACCTTTCTCAAG 59.188 47.826 0.00 0.00 0.00 3.02
361 1775 3.433598 CCAGTCCTGTTCACCTTTCTCAA 60.434 47.826 0.00 0.00 0.00 3.02
362 1776 2.104792 CCAGTCCTGTTCACCTTTCTCA 59.895 50.000 0.00 0.00 0.00 3.27
363 1777 2.772287 CCAGTCCTGTTCACCTTTCTC 58.228 52.381 0.00 0.00 0.00 2.87
364 1778 1.202818 GCCAGTCCTGTTCACCTTTCT 60.203 52.381 0.00 0.00 0.00 2.52
365 1779 1.239347 GCCAGTCCTGTTCACCTTTC 58.761 55.000 0.00 0.00 0.00 2.62
366 1780 0.535102 CGCCAGTCCTGTTCACCTTT 60.535 55.000 0.00 0.00 0.00 3.11
367 1781 1.071471 CGCCAGTCCTGTTCACCTT 59.929 57.895 0.00 0.00 0.00 3.50
368 1782 0.830444 TACGCCAGTCCTGTTCACCT 60.830 55.000 0.00 0.00 0.00 4.00
369 1783 0.389948 CTACGCCAGTCCTGTTCACC 60.390 60.000 0.00 0.00 0.00 4.02
370 1784 0.601558 TCTACGCCAGTCCTGTTCAC 59.398 55.000 0.00 0.00 0.00 3.18
371 1785 0.888619 CTCTACGCCAGTCCTGTTCA 59.111 55.000 0.00 0.00 0.00 3.18
372 1786 0.889306 ACTCTACGCCAGTCCTGTTC 59.111 55.000 0.00 0.00 0.00 3.18
373 1787 1.817447 GTACTCTACGCCAGTCCTGTT 59.183 52.381 0.00 0.00 0.00 3.16
374 1788 1.461559 GTACTCTACGCCAGTCCTGT 58.538 55.000 0.00 0.00 0.00 4.00
375 1789 0.739561 GGTACTCTACGCCAGTCCTG 59.260 60.000 0.00 0.00 0.00 3.86
376 1790 0.624785 AGGTACTCTACGCCAGTCCT 59.375 55.000 0.00 0.00 0.00 3.85
377 1791 1.472188 AAGGTACTCTACGCCAGTCC 58.528 55.000 0.00 0.00 38.49 3.85
378 1792 3.441572 TGTAAAGGTACTCTACGCCAGTC 59.558 47.826 0.00 0.00 38.49 3.51
379 1793 3.424703 TGTAAAGGTACTCTACGCCAGT 58.575 45.455 0.00 0.00 38.49 4.00
380 1794 4.445452 TTGTAAAGGTACTCTACGCCAG 57.555 45.455 0.00 0.00 38.49 4.85
381 1795 4.870123 TTTGTAAAGGTACTCTACGCCA 57.130 40.909 0.00 0.00 38.49 5.69
382 1796 7.038048 ACTAATTTGTAAAGGTACTCTACGCC 58.962 38.462 0.00 0.00 38.49 5.68
383 1797 8.471361 AACTAATTTGTAAAGGTACTCTACGC 57.529 34.615 0.00 0.00 38.49 4.42
396 1810 8.973378 GCACTTGCATTTGTAACTAATTTGTAA 58.027 29.630 0.00 0.00 41.59 2.41
397 1811 8.514136 GCACTTGCATTTGTAACTAATTTGTA 57.486 30.769 0.00 0.00 41.59 2.41
398 1812 7.406799 GCACTTGCATTTGTAACTAATTTGT 57.593 32.000 0.00 0.00 41.59 2.83
415 1829 1.134075 CTGCTCGACATGCACTTGC 59.866 57.895 0.00 0.00 42.50 4.01
416 1830 1.792301 CCTGCTCGACATGCACTTG 59.208 57.895 0.00 0.00 36.37 3.16
417 1831 2.037136 GCCTGCTCGACATGCACTT 61.037 57.895 0.00 0.00 39.49 3.16
418 1832 1.607801 TAGCCTGCTCGACATGCACT 61.608 55.000 14.10 6.00 41.91 4.40
419 1833 0.740868 TTAGCCTGCTCGACATGCAC 60.741 55.000 14.10 0.00 41.91 4.57
420 1834 0.740868 GTTAGCCTGCTCGACATGCA 60.741 55.000 14.10 7.59 41.91 3.96
421 1835 1.756375 CGTTAGCCTGCTCGACATGC 61.756 60.000 0.00 7.00 39.96 4.06
422 1836 0.179137 TCGTTAGCCTGCTCGACATG 60.179 55.000 0.00 0.00 0.00 3.21
423 1837 0.530744 TTCGTTAGCCTGCTCGACAT 59.469 50.000 0.00 0.00 32.14 3.06
424 1838 0.109272 CTTCGTTAGCCTGCTCGACA 60.109 55.000 0.00 0.00 32.14 4.35
425 1839 0.109226 ACTTCGTTAGCCTGCTCGAC 60.109 55.000 0.00 0.00 32.14 4.20
426 1840 0.170561 GACTTCGTTAGCCTGCTCGA 59.829 55.000 0.00 0.00 0.00 4.04
427 1841 0.802607 GGACTTCGTTAGCCTGCTCG 60.803 60.000 0.00 0.00 0.00 5.03
428 1842 0.460459 GGGACTTCGTTAGCCTGCTC 60.460 60.000 0.00 0.00 0.00 4.26
429 1843 0.905337 AGGGACTTCGTTAGCCTGCT 60.905 55.000 0.00 0.00 27.25 4.24
430 1844 1.597461 AGGGACTTCGTTAGCCTGC 59.403 57.895 0.00 0.00 27.25 4.85
443 1857 5.850614 TCTTCTGTTAGTGTACAAAGGGAC 58.149 41.667 0.00 0.00 0.00 4.46
444 1858 5.510861 GCTCTTCTGTTAGTGTACAAAGGGA 60.511 44.000 0.00 0.00 0.00 4.20
445 1859 4.691216 GCTCTTCTGTTAGTGTACAAAGGG 59.309 45.833 0.00 0.00 0.00 3.95
446 1860 4.691216 GGCTCTTCTGTTAGTGTACAAAGG 59.309 45.833 0.00 0.00 0.00 3.11
447 1861 4.691216 GGGCTCTTCTGTTAGTGTACAAAG 59.309 45.833 0.00 0.00 0.00 2.77
448 1862 4.347000 AGGGCTCTTCTGTTAGTGTACAAA 59.653 41.667 0.00 0.00 0.00 2.83
449 1863 3.901844 AGGGCTCTTCTGTTAGTGTACAA 59.098 43.478 0.00 0.00 0.00 2.41
450 1864 3.507411 AGGGCTCTTCTGTTAGTGTACA 58.493 45.455 0.00 0.00 0.00 2.90
451 1865 4.496360 GAAGGGCTCTTCTGTTAGTGTAC 58.504 47.826 19.51 0.00 44.43 2.90
452 1866 4.803098 GAAGGGCTCTTCTGTTAGTGTA 57.197 45.455 19.51 0.00 44.43 2.90
453 1867 3.686916 GAAGGGCTCTTCTGTTAGTGT 57.313 47.619 19.51 0.00 44.43 3.55
463 1877 2.165998 GACAAAGCATGAAGGGCTCTT 58.834 47.619 0.00 0.00 41.66 2.85
464 1878 1.074405 TGACAAAGCATGAAGGGCTCT 59.926 47.619 0.00 0.00 41.66 4.09
465 1879 1.471684 CTGACAAAGCATGAAGGGCTC 59.528 52.381 0.00 0.00 41.66 4.70
466 1880 1.074405 TCTGACAAAGCATGAAGGGCT 59.926 47.619 0.00 0.00 45.15 5.19
467 1881 1.200948 GTCTGACAAAGCATGAAGGGC 59.799 52.381 2.24 0.00 0.00 5.19
468 1882 2.486982 CTGTCTGACAAAGCATGAAGGG 59.513 50.000 12.16 0.00 0.00 3.95
469 1883 2.095364 GCTGTCTGACAAAGCATGAAGG 60.095 50.000 12.16 0.00 36.91 3.46
470 1884 2.812591 AGCTGTCTGACAAAGCATGAAG 59.187 45.455 19.94 4.61 39.47 3.02
471 1885 2.810274 GAGCTGTCTGACAAAGCATGAA 59.190 45.455 19.94 0.00 39.47 2.57
472 1886 2.420642 GAGCTGTCTGACAAAGCATGA 58.579 47.619 19.94 0.00 39.47 3.07
473 1887 1.128136 CGAGCTGTCTGACAAAGCATG 59.872 52.381 19.94 10.47 39.47 4.06
474 1888 1.270518 ACGAGCTGTCTGACAAAGCAT 60.271 47.619 19.94 8.53 39.47 3.79
475 1889 0.104855 ACGAGCTGTCTGACAAAGCA 59.895 50.000 19.94 0.00 39.47 3.91
476 1890 1.221414 AACGAGCTGTCTGACAAAGC 58.779 50.000 12.16 12.39 37.20 3.51
477 1891 2.866156 TCAAACGAGCTGTCTGACAAAG 59.134 45.455 12.16 2.33 0.00 2.77
478 1892 2.899976 TCAAACGAGCTGTCTGACAAA 58.100 42.857 12.16 0.00 0.00 2.83
479 1893 2.595124 TCAAACGAGCTGTCTGACAA 57.405 45.000 12.16 0.00 0.00 3.18
480 1894 2.407090 CATCAAACGAGCTGTCTGACA 58.593 47.619 10.50 10.50 0.00 3.58
481 1895 1.728971 CCATCAAACGAGCTGTCTGAC 59.271 52.381 0.00 0.00 0.00 3.51
482 1896 1.344438 ACCATCAAACGAGCTGTCTGA 59.656 47.619 0.00 0.00 0.00 3.27
483 1897 1.800805 ACCATCAAACGAGCTGTCTG 58.199 50.000 0.00 0.00 0.00 3.51
484 1898 2.146342 CAACCATCAAACGAGCTGTCT 58.854 47.619 0.00 0.00 0.00 3.41
485 1899 1.873591 ACAACCATCAAACGAGCTGTC 59.126 47.619 0.00 0.00 0.00 3.51
486 1900 1.603802 CACAACCATCAAACGAGCTGT 59.396 47.619 0.00 0.00 0.00 4.40
487 1901 1.603802 ACACAACCATCAAACGAGCTG 59.396 47.619 0.00 0.00 0.00 4.24
488 1902 1.603802 CACACAACCATCAAACGAGCT 59.396 47.619 0.00 0.00 0.00 4.09
502 1916 5.733676 TCAGAATAGCTAAGATGCACACAA 58.266 37.500 0.00 0.00 34.99 3.33
527 1941 1.276421 AGCATAAAGAGCGACACCTGT 59.724 47.619 0.00 0.00 37.01 4.00
530 1944 2.484264 ACAAAGCATAAAGAGCGACACC 59.516 45.455 0.00 0.00 37.01 4.16
546 1960 6.834959 ATGTAGCATCGAACAGATACAAAG 57.165 37.500 14.83 0.00 37.52 2.77
555 1969 5.940192 AACTCAAAATGTAGCATCGAACA 57.060 34.783 0.00 0.00 0.00 3.18
604 2018 0.788391 CGGCTCTTTCGTTAGCGTTT 59.212 50.000 0.00 0.00 39.71 3.60
606 2020 1.445582 CCGGCTCTTTCGTTAGCGT 60.446 57.895 0.00 0.00 39.71 5.07
608 2022 2.220479 ATACCGGCTCTTTCGTTAGC 57.780 50.000 0.00 0.00 38.03 3.09
614 2028 3.814005 TTGTCCTATACCGGCTCTTTC 57.186 47.619 0.00 0.00 0.00 2.62
615 2029 3.773119 TCTTTGTCCTATACCGGCTCTTT 59.227 43.478 0.00 0.00 0.00 2.52
651 2072 0.683179 AATTAACGCAAGGGAGGCCC 60.683 55.000 0.00 0.00 45.90 5.80
663 2084 5.971202 GCCATGAGACACCATTAAATTAACG 59.029 40.000 0.00 0.00 0.00 3.18
671 2092 1.831106 ACGAGCCATGAGACACCATTA 59.169 47.619 0.00 0.00 0.00 1.90
674 2095 1.293179 CACGAGCCATGAGACACCA 59.707 57.895 0.00 0.00 0.00 4.17
723 2152 4.631813 CCATGAAAGCTGTGTTAGTAGGTC 59.368 45.833 0.00 0.00 0.00 3.85
753 2191 6.077202 TGGATGCAATATGATAATAGCCCA 57.923 37.500 0.00 0.00 0.00 5.36
760 2198 5.279106 GCTTTGGCTGGATGCAATATGATAA 60.279 40.000 0.00 0.00 45.15 1.75
772 2218 2.338015 CGCTGTGCTTTGGCTGGAT 61.338 57.895 0.00 0.00 39.59 3.41
935 2393 2.536365 CGCATCAAACTCGGCTTAGTA 58.464 47.619 0.00 0.00 0.00 1.82
967 2426 1.611673 GCCTTGCTAGAAGCTGTTGGA 60.612 52.381 0.00 0.00 42.97 3.53
978 2437 0.753479 TCTCCTCCTCGCCTTGCTAG 60.753 60.000 0.00 0.00 0.00 3.42
1126 2611 2.000825 GAGAAGGGAAGGGGGCCATC 62.001 65.000 4.39 0.00 0.00 3.51
1221 2706 2.031163 GGATCCTCCGCCGGATTG 59.969 66.667 6.16 0.56 43.71 2.67
1236 2721 2.604686 AGCCAGAGCAAGACGGGA 60.605 61.111 0.00 0.00 43.56 5.14
1299 2784 7.404671 AAATGGAAGCAAATAGTTACCGATT 57.595 32.000 0.00 0.00 0.00 3.34
1324 3092 3.128068 CACGGCATGATGATGATAATGGG 59.872 47.826 0.00 0.00 0.00 4.00
1360 3170 4.260579 GCAACAACCAACAAGTAAAATGGC 60.261 41.667 0.00 0.00 36.37 4.40
1430 3252 2.434359 GTACACCAGCTCCGGCAC 60.434 66.667 0.00 0.00 41.70 5.01
1435 3257 1.215647 CGGTCTGTACACCAGCTCC 59.784 63.158 3.63 0.00 41.25 4.70
1510 3335 1.592400 TAGTTGGTGGCCGAGTCTCG 61.592 60.000 15.53 15.53 40.07 4.04
1511 3336 0.606604 TTAGTTGGTGGCCGAGTCTC 59.393 55.000 0.00 0.00 0.00 3.36
1512 3337 1.053424 TTTAGTTGGTGGCCGAGTCT 58.947 50.000 0.00 0.00 0.00 3.24
1513 3338 1.154197 GTTTAGTTGGTGGCCGAGTC 58.846 55.000 0.00 0.00 0.00 3.36
1514 3339 0.470766 TGTTTAGTTGGTGGCCGAGT 59.529 50.000 0.00 0.00 0.00 4.18
1515 3340 1.468520 CATGTTTAGTTGGTGGCCGAG 59.531 52.381 0.00 0.00 0.00 4.63
1516 3341 1.202830 ACATGTTTAGTTGGTGGCCGA 60.203 47.619 0.00 0.00 0.00 5.54
1517 3342 1.243902 ACATGTTTAGTTGGTGGCCG 58.756 50.000 0.00 0.00 0.00 6.13
1518 3343 3.761752 ACATACATGTTTAGTTGGTGGCC 59.238 43.478 2.30 0.00 37.90 5.36
1519 3344 4.457603 TCACATACATGTTTAGTTGGTGGC 59.542 41.667 2.30 0.00 39.39 5.01
1521 3346 5.181056 TGCTCACATACATGTTTAGTTGGTG 59.819 40.000 2.30 0.44 39.39 4.17
1522 3347 5.312895 TGCTCACATACATGTTTAGTTGGT 58.687 37.500 2.30 0.00 39.39 3.67
1523 3348 5.878332 TGCTCACATACATGTTTAGTTGG 57.122 39.130 2.30 0.00 39.39 3.77
1580 3409 5.186198 AGATTACATTGGCAACCTAGTGAC 58.814 41.667 0.00 0.00 0.00 3.67
1581 3410 5.435686 AGATTACATTGGCAACCTAGTGA 57.564 39.130 0.00 0.00 0.00 3.41
1764 3597 9.853177 ATGGAGTAAAGCAAAGCTAATTACTAT 57.147 29.630 13.22 5.24 40.23 2.12
1825 3783 2.487265 GGGAAGTTTCAGAAGCAGTGGA 60.487 50.000 0.00 0.00 0.00 4.02
1831 3789 4.074970 TGAAGATGGGAAGTTTCAGAAGC 58.925 43.478 0.00 0.00 0.00 3.86
1876 3834 8.361889 TGTGTACATAGTACATACAACACAACT 58.638 33.333 16.31 0.00 41.96 3.16
1961 4044 1.206878 TGCTCCTCATACCACTGCAT 58.793 50.000 0.00 0.00 0.00 3.96
1994 4077 2.161410 CGGCAATGAAAAGTGGATTCGA 59.839 45.455 0.00 0.00 0.00 3.71
2032 4115 1.211449 CAGCGGTGGCGCAATTAAA 59.789 52.632 10.83 0.00 46.35 1.52
2050 4133 5.391629 CGTACCCTTAGCAATTTGAAAGGTC 60.392 44.000 20.65 13.52 37.40 3.85
2118 4201 5.598417 CCAAAGTTCTCCATTTTATAGGGGG 59.402 44.000 0.00 0.00 0.00 5.40
2119 4202 5.598417 CCCAAAGTTCTCCATTTTATAGGGG 59.402 44.000 0.00 0.00 0.00 4.79
2143 4235 9.481340 TTGAGTAGAGATATGTTGTATTGCATC 57.519 33.333 0.00 0.00 0.00 3.91
2175 4351 4.652822 ACACTAAAGTCAAGGCCTTAAGG 58.347 43.478 20.00 17.81 38.53 2.69
2176 4352 7.739498 TTAACACTAAAGTCAAGGCCTTAAG 57.261 36.000 20.00 7.14 0.00 1.85
2177 4353 7.013559 GGTTTAACACTAAAGTCAAGGCCTTAA 59.986 37.037 20.00 0.00 0.00 1.85
2178 4354 6.487668 GGTTTAACACTAAAGTCAAGGCCTTA 59.512 38.462 20.00 3.99 0.00 2.69
2179 4355 5.301045 GGTTTAACACTAAAGTCAAGGCCTT 59.699 40.000 13.78 13.78 0.00 4.35
2180 4356 4.825634 GGTTTAACACTAAAGTCAAGGCCT 59.174 41.667 0.00 0.00 0.00 5.19
2181 4357 4.022589 GGGTTTAACACTAAAGTCAAGGCC 60.023 45.833 0.00 0.00 0.00 5.19
2182 4358 4.825634 AGGGTTTAACACTAAAGTCAAGGC 59.174 41.667 0.00 0.00 23.74 4.35
2211 4387 7.399523 CACGAGATAGGTAATTTAAAGCACAC 58.600 38.462 0.00 0.00 0.00 3.82
2232 4408 2.434331 CCTGGAAAAGGGGCACGA 59.566 61.111 0.00 0.00 43.15 4.35
2346 4522 6.100004 TGTTAGAACATTAGCAGCTACTCAC 58.900 40.000 0.00 0.00 33.17 3.51
2475 4651 3.643320 CCCTCTACACCTCATATTGCTCA 59.357 47.826 0.00 0.00 0.00 4.26
2478 4654 4.689612 TTCCCTCTACACCTCATATTGC 57.310 45.455 0.00 0.00 0.00 3.56
2502 4679 8.131455 TCAATACTATGAGAAAGAAACGATGC 57.869 34.615 0.00 0.00 0.00 3.91
2563 4740 7.750229 ATGTCTGAAGTTGAGCAAAATAGAA 57.250 32.000 0.00 0.00 0.00 2.10
2568 4747 5.239306 CCTGTATGTCTGAAGTTGAGCAAAA 59.761 40.000 0.00 0.00 0.00 2.44
2585 4764 2.228822 GCACCACAACTTTCCCTGTATG 59.771 50.000 0.00 0.00 0.00 2.39
2614 4793 5.645929 TGCATTGTATGTTTCGGTTCATACT 59.354 36.000 17.97 4.69 43.63 2.12
2640 4819 4.959596 ATCTATCGCATCATGGCAATTC 57.040 40.909 0.00 0.00 0.00 2.17
2676 4855 5.492855 TCCTTCAGTTCCCTTTATTTCGA 57.507 39.130 0.00 0.00 0.00 3.71
2845 5051 1.860484 GACAAGCCAAGCTCTGCACC 61.860 60.000 9.77 0.00 38.25 5.01
2877 5083 2.598565 TGGTCACTAACTCTGCACTCT 58.401 47.619 0.00 0.00 0.00 3.24
2904 5110 8.522830 AGCACAATCTTAAGCAATTTAAGCTAA 58.477 29.630 0.00 0.00 45.17 3.09
3016 5265 0.324183 CCCAGAGCCTCTCTCACTGA 60.324 60.000 0.00 0.00 44.35 3.41
3110 5360 1.381928 GCTCCGGTGATACTCCACGA 61.382 60.000 7.92 0.00 37.91 4.35
3168 5421 3.450507 ACGGTCATGTCGTGGTCA 58.549 55.556 13.97 0.00 39.55 4.02
3196 5449 4.101448 GATCCACGCCTGGGTGCT 62.101 66.667 8.68 0.00 38.25 4.40
3321 5592 4.453480 AAGTTTCCCTTGATCTTGTCCA 57.547 40.909 0.00 0.00 30.18 4.02
3334 5605 5.070685 ACATCAAGAAGGTACAAGTTTCCC 58.929 41.667 0.00 0.00 0.00 3.97
3343 5614 3.877508 GGCACCATACATCAAGAAGGTAC 59.122 47.826 0.00 0.00 0.00 3.34
3481 6331 8.800370 TGGCATGACAAATTAACAATAGAGTA 57.200 30.769 0.00 0.00 0.00 2.59
3508 6375 7.546778 AACAAACAAACAAAGAAACACTTGT 57.453 28.000 0.00 0.00 38.98 3.16
3618 6485 2.507866 GCGTGAGAAGACGAGTTAGAC 58.492 52.381 0.00 0.00 42.10 2.59
3649 6516 0.647410 CTTATGTGCGTGAGGAAGCG 59.353 55.000 0.00 0.00 35.87 4.68
3774 6647 3.758023 TCACACTTGTATTGCCTTGATGG 59.242 43.478 0.00 0.00 39.35 3.51
3856 6729 3.828451 ACTCCCTTTTGTGATGTTGGATG 59.172 43.478 0.00 0.00 0.00 3.51
3911 6784 9.486497 AGACATCATGTAATCATCTATGTTGTC 57.514 33.333 14.62 14.62 31.15 3.18
3935 6811 9.143631 CATTAATATGATTAGTGACGCATGAGA 57.856 33.333 2.50 0.00 33.37 3.27
3949 6825 8.887036 TCTACGAGCAACACATTAATATGATT 57.113 30.769 0.00 0.00 35.65 2.57
3962 6838 1.204704 CCATGGACTCTACGAGCAACA 59.795 52.381 5.56 0.00 32.04 3.33
3968 6893 0.393944 AGCGTCCATGGACTCTACGA 60.394 55.000 35.84 2.12 42.54 3.43
3970 6895 0.029567 CGAGCGTCCATGGACTCTAC 59.970 60.000 35.84 25.46 39.87 2.59
3977 6902 2.413351 ACGATCGAGCGTCCATGG 59.587 61.111 24.79 4.97 41.22 3.66
3993 6918 1.412710 TCCTATGGTCGGCAAGATGAC 59.587 52.381 0.00 0.00 0.00 3.06
3996 6921 1.837439 TGTTCCTATGGTCGGCAAGAT 59.163 47.619 0.00 0.00 0.00 2.40
4000 6925 0.908910 ATGTGTTCCTATGGTCGGCA 59.091 50.000 0.00 0.00 0.00 5.69
4001 6926 1.299541 CATGTGTTCCTATGGTCGGC 58.700 55.000 0.00 0.00 0.00 5.54
4006 6931 4.987408 TGATTTGCATGTGTTCCTATGG 57.013 40.909 0.00 0.00 0.00 2.74
4014 6939 4.931002 GGCAACTAATTGATTTGCATGTGT 59.069 37.500 17.25 0.00 46.12 3.72
4033 6958 2.441750 ACTCCAGTTGACTTTAGGGCAA 59.558 45.455 0.00 0.00 41.27 4.52
4035 6960 2.861147 ACTCCAGTTGACTTTAGGGC 57.139 50.000 0.00 0.00 0.00 5.19
4036 6961 4.319177 CTGAACTCCAGTTGACTTTAGGG 58.681 47.826 0.00 0.00 38.56 3.53
4037 6962 4.202367 ACCTGAACTCCAGTTGACTTTAGG 60.202 45.833 0.00 0.00 41.33 2.69
4038 6963 4.962155 ACCTGAACTCCAGTTGACTTTAG 58.038 43.478 0.00 0.00 41.33 1.85
4039 6964 5.365619 GAACCTGAACTCCAGTTGACTTTA 58.634 41.667 0.00 0.00 41.33 1.85
4044 6969 2.123589 TGGAACCTGAACTCCAGTTGA 58.876 47.619 0.00 0.00 41.33 3.18
4048 6973 2.229784 GCAATTGGAACCTGAACTCCAG 59.770 50.000 7.72 0.00 42.61 3.86
4050 6975 2.229784 CTGCAATTGGAACCTGAACTCC 59.770 50.000 7.72 0.00 0.00 3.85
4051 6976 2.887152 ACTGCAATTGGAACCTGAACTC 59.113 45.455 7.72 0.00 0.00 3.01
4057 6982 2.610438 ATGGACTGCAATTGGAACCT 57.390 45.000 18.38 6.66 0.00 3.50
4066 6991 0.739462 CGCGAGGTAATGGACTGCAA 60.739 55.000 0.00 0.00 0.00 4.08
4067 6992 1.153647 CGCGAGGTAATGGACTGCA 60.154 57.895 0.00 0.00 0.00 4.41
4068 6993 3.706140 CGCGAGGTAATGGACTGC 58.294 61.111 0.00 0.00 0.00 4.40
4086 7011 1.005347 CGTTATGCGTGGAATTCCGTC 60.005 52.381 19.57 13.59 39.43 4.79
4093 7018 1.195900 GTTTGCTCGTTATGCGTGGAA 59.804 47.619 0.00 0.00 41.27 3.53
4097 7022 1.459592 GTGAGTTTGCTCGTTATGCGT 59.540 47.619 0.00 0.00 44.48 5.24
4099 7024 2.412847 GGTGTGAGTTTGCTCGTTATGC 60.413 50.000 0.00 0.00 44.48 3.14
4102 7027 1.139256 TGGGTGTGAGTTTGCTCGTTA 59.861 47.619 0.00 0.00 44.48 3.18
4110 7035 5.838521 ACCAGATATTTTTGGGTGTGAGTTT 59.161 36.000 0.00 0.00 38.82 2.66
4121 7046 6.458751 CGGAGGATGAACACCAGATATTTTTG 60.459 42.308 0.00 0.00 0.00 2.44
4124 7050 4.708177 CGGAGGATGAACACCAGATATTT 58.292 43.478 0.00 0.00 0.00 1.40
4162 7088 2.317609 CCTTCCAACGGCTCGTGTG 61.318 63.158 0.94 3.03 39.99 3.82
4164 7090 2.742372 CCCTTCCAACGGCTCGTG 60.742 66.667 0.94 0.00 39.99 4.35
4189 7115 1.334869 CCTCGCTTAACATGGCCAATC 59.665 52.381 10.96 0.00 0.00 2.67
4206 7132 3.492421 TCGTAACATACAACCGTCCTC 57.508 47.619 0.00 0.00 0.00 3.71
4211 7788 4.593597 ATTGCTTCGTAACATACAACCG 57.406 40.909 0.00 0.00 0.00 4.44
4215 7792 5.467063 TGTGTCAATTGCTTCGTAACATACA 59.533 36.000 0.00 0.00 0.00 2.29
4218 7795 5.238432 TCTTGTGTCAATTGCTTCGTAACAT 59.762 36.000 0.00 0.00 0.00 2.71
4220 7797 5.090652 TCTTGTGTCAATTGCTTCGTAAC 57.909 39.130 0.00 0.00 0.00 2.50
4273 7850 4.343231 TGGCTAGCATGAAATTCCTTTGA 58.657 39.130 18.24 0.00 0.00 2.69
4314 7891 7.122353 TCTCGGTTAAATCCCTCTATACATAGC 59.878 40.741 0.00 0.00 0.00 2.97
4318 7895 7.850935 ATTCTCGGTTAAATCCCTCTATACA 57.149 36.000 0.00 0.00 0.00 2.29
4320 7897 8.365647 GTCAATTCTCGGTTAAATCCCTCTATA 58.634 37.037 0.00 0.00 0.00 1.31
4337 7914 7.118971 GCACATATCATCCTTAGGTCAATTCTC 59.881 40.741 0.00 0.00 0.00 2.87
4341 7918 5.073554 TGGCACATATCATCCTTAGGTCAAT 59.926 40.000 0.00 0.00 0.00 2.57
4357 7934 4.840115 TCTGATGAGGTATCATGGCACATA 59.160 41.667 0.00 0.00 46.39 2.29
4359 7936 3.040477 TCTGATGAGGTATCATGGCACA 58.960 45.455 0.00 0.00 46.39 4.57
4366 7943 5.211201 TCCAATGAGTCTGATGAGGTATCA 58.789 41.667 0.00 0.00 43.40 2.15
4402 8083 0.869068 TTCGTTGTGTTATGGTGGCG 59.131 50.000 0.00 0.00 0.00 5.69
4411 8092 3.945285 ACAGTTGGAATCTTCGTTGTGTT 59.055 39.130 0.00 0.00 0.00 3.32
4430 8111 6.262273 TCTTTGTTCCTAACTAAAGCCAACAG 59.738 38.462 0.00 0.00 33.50 3.16
4440 8121 6.325545 TGTTGGACTCTCTTTGTTCCTAACTA 59.674 38.462 0.00 0.00 0.00 2.24
4441 8122 5.130477 TGTTGGACTCTCTTTGTTCCTAACT 59.870 40.000 0.00 0.00 0.00 2.24
4445 8126 3.745797 GCTGTTGGACTCTCTTTGTTCCT 60.746 47.826 0.00 0.00 0.00 3.36
4447 8128 3.206150 TGCTGTTGGACTCTCTTTGTTC 58.794 45.455 0.00 0.00 0.00 3.18
4450 8131 2.547211 CACTGCTGTTGGACTCTCTTTG 59.453 50.000 0.00 0.00 0.00 2.77
4457 8138 1.228063 CTGCCACTGCTGTTGGACT 60.228 57.895 13.67 0.00 38.71 3.85
4458 8139 2.263741 CCTGCCACTGCTGTTGGAC 61.264 63.158 13.67 7.55 38.71 4.02
4459 8140 2.113774 CCTGCCACTGCTGTTGGA 59.886 61.111 13.67 3.19 38.71 3.53
4461 8142 2.558286 CCACCTGCCACTGCTGTTG 61.558 63.158 0.00 0.00 38.71 3.33
4467 8148 2.360350 AATCGCCACCTGCCACTG 60.360 61.111 0.00 0.00 36.24 3.66
4468 8149 2.360350 CAATCGCCACCTGCCACT 60.360 61.111 0.00 0.00 36.24 4.00
4469 8150 2.359850 TCAATCGCCACCTGCCAC 60.360 61.111 0.00 0.00 36.24 5.01
4473 8154 1.656652 CCTTAGTCAATCGCCACCTG 58.343 55.000 0.00 0.00 0.00 4.00
4475 8156 1.095807 GCCCTTAGTCAATCGCCACC 61.096 60.000 0.00 0.00 0.00 4.61
4476 8157 1.095807 GGCCCTTAGTCAATCGCCAC 61.096 60.000 0.00 0.00 36.38 5.01
4477 8158 1.223487 GGCCCTTAGTCAATCGCCA 59.777 57.895 0.00 0.00 36.38 5.69
4478 8159 0.533085 GAGGCCCTTAGTCAATCGCC 60.533 60.000 0.00 0.00 36.62 5.54
4480 8161 0.249489 CCGAGGCCCTTAGTCAATCG 60.249 60.000 0.00 0.00 0.00 3.34
4481 8162 0.533085 GCCGAGGCCCTTAGTCAATC 60.533 60.000 0.00 0.00 34.56 2.67
4482 8163 1.527370 GCCGAGGCCCTTAGTCAAT 59.473 57.895 0.00 0.00 34.56 2.57
4483 8164 2.987125 GCCGAGGCCCTTAGTCAA 59.013 61.111 0.00 0.00 34.56 3.18
4484 8165 3.458163 CGCCGAGGCCCTTAGTCA 61.458 66.667 8.72 0.00 37.98 3.41
4498 8179 1.608717 ATCCAGATATCTCGGCCGCC 61.609 60.000 23.51 0.00 0.00 6.13
4499 8180 1.103803 TATCCAGATATCTCGGCCGC 58.896 55.000 23.51 4.91 0.00 6.53
4500 8181 2.092323 TGTATCCAGATATCTCGGCCG 58.908 52.381 22.12 22.12 0.00 6.13
4501 8182 2.166664 GGTGTATCCAGATATCTCGGCC 59.833 54.545 1.03 0.00 35.97 6.13
4502 8183 2.826128 TGGTGTATCCAGATATCTCGGC 59.174 50.000 1.03 0.00 41.93 5.54
4520 8201 0.249398 GACCTCTACGCCATTGTGGT 59.751 55.000 0.00 0.00 40.46 4.16
4521 8202 0.462047 GGACCTCTACGCCATTGTGG 60.462 60.000 0.00 0.00 41.55 4.17
4522 8203 0.537188 AGGACCTCTACGCCATTGTG 59.463 55.000 0.00 0.00 0.00 3.33
4523 8204 1.066143 CAAGGACCTCTACGCCATTGT 60.066 52.381 0.00 0.00 0.00 2.71
4524 8205 1.207089 TCAAGGACCTCTACGCCATTG 59.793 52.381 0.00 0.00 0.00 2.82
4526 8207 1.568504 TTCAAGGACCTCTACGCCAT 58.431 50.000 0.00 0.00 0.00 4.40
4527 8208 1.480954 GATTCAAGGACCTCTACGCCA 59.519 52.381 0.00 0.00 0.00 5.69
4528 8209 1.757699 AGATTCAAGGACCTCTACGCC 59.242 52.381 0.00 0.00 0.00 5.68
4529 8210 2.691011 AGAGATTCAAGGACCTCTACGC 59.309 50.000 0.00 0.00 34.54 4.42
4531 8212 3.704061 AGCAGAGATTCAAGGACCTCTAC 59.296 47.826 0.00 0.00 34.54 2.59
4533 8214 2.831565 AGCAGAGATTCAAGGACCTCT 58.168 47.619 0.00 0.00 36.52 3.69
4534 8215 3.957497 TCTAGCAGAGATTCAAGGACCTC 59.043 47.826 0.00 0.00 0.00 3.85
4535 8216 3.960102 CTCTAGCAGAGATTCAAGGACCT 59.040 47.826 7.22 0.00 45.07 3.85
4547 8228 6.605146 TGGCACAAAACCTCTCTAGCAGAG 62.605 50.000 10.56 10.56 42.11 3.35
4548 8229 2.289694 GGCACAAAACCTCTCTAGCAGA 60.290 50.000 0.00 0.00 0.00 4.26
4549 8230 2.079925 GGCACAAAACCTCTCTAGCAG 58.920 52.381 0.00 0.00 0.00 4.24
4550 8231 1.419762 TGGCACAAAACCTCTCTAGCA 59.580 47.619 0.00 0.00 31.92 3.49
4551 8232 2.185004 TGGCACAAAACCTCTCTAGC 57.815 50.000 0.00 0.00 31.92 3.42
4565 8246 0.827368 TTTGGTTCTTGGGTTGGCAC 59.173 50.000 0.00 0.00 0.00 5.01
4566 8247 0.827368 GTTTGGTTCTTGGGTTGGCA 59.173 50.000 0.00 0.00 0.00 4.92
4567 8248 0.105964 GGTTTGGTTCTTGGGTTGGC 59.894 55.000 0.00 0.00 0.00 4.52
4568 8249 1.490574 TGGTTTGGTTCTTGGGTTGG 58.509 50.000 0.00 0.00 0.00 3.77
4569 8250 3.618690 TTTGGTTTGGTTCTTGGGTTG 57.381 42.857 0.00 0.00 0.00 3.77
4570 8251 4.853468 ATTTTGGTTTGGTTCTTGGGTT 57.147 36.364 0.00 0.00 0.00 4.11
4571 8252 4.853468 AATTTTGGTTTGGTTCTTGGGT 57.147 36.364 0.00 0.00 0.00 4.51
4572 8253 5.238432 GCTAAATTTTGGTTTGGTTCTTGGG 59.762 40.000 0.00 0.00 0.00 4.12
4573 8254 5.238432 GGCTAAATTTTGGTTTGGTTCTTGG 59.762 40.000 0.00 0.00 0.00 3.61
4574 8255 6.054941 AGGCTAAATTTTGGTTTGGTTCTTG 58.945 36.000 0.00 0.00 0.00 3.02
4575 8256 6.247229 AGGCTAAATTTTGGTTTGGTTCTT 57.753 33.333 0.00 0.00 0.00 2.52
4577 8258 5.637810 GCTAGGCTAAATTTTGGTTTGGTTC 59.362 40.000 0.00 0.00 0.00 3.62
4578 8259 5.512404 GGCTAGGCTAAATTTTGGTTTGGTT 60.512 40.000 9.46 0.00 0.00 3.67
4579 8260 4.020573 GGCTAGGCTAAATTTTGGTTTGGT 60.021 41.667 9.46 0.00 0.00 3.67
4580 8261 4.503910 GGCTAGGCTAAATTTTGGTTTGG 58.496 43.478 9.46 0.00 0.00 3.28
4583 8264 2.165641 GCGGCTAGGCTAAATTTTGGTT 59.834 45.455 15.11 0.00 0.00 3.67
4584 8265 1.749063 GCGGCTAGGCTAAATTTTGGT 59.251 47.619 15.11 0.00 0.00 3.67
4585 8266 2.024414 AGCGGCTAGGCTAAATTTTGG 58.976 47.619 15.11 0.00 42.62 3.28
4586 8267 2.423538 ACAGCGGCTAGGCTAAATTTTG 59.576 45.455 15.11 0.00 42.53 2.44
4587 8268 2.723273 ACAGCGGCTAGGCTAAATTTT 58.277 42.857 15.11 0.00 42.53 1.82
4588 8269 2.420058 ACAGCGGCTAGGCTAAATTT 57.580 45.000 15.11 0.00 42.53 1.82
4589 8270 2.017049 CAACAGCGGCTAGGCTAAATT 58.983 47.619 15.11 1.03 42.53 1.82
4590 8271 1.065418 ACAACAGCGGCTAGGCTAAAT 60.065 47.619 15.11 0.00 42.53 1.40
4591 8272 0.323629 ACAACAGCGGCTAGGCTAAA 59.676 50.000 15.11 0.00 42.53 1.85
4592 8273 0.391130 CACAACAGCGGCTAGGCTAA 60.391 55.000 15.11 0.00 42.53 3.09
4593 8274 1.218047 CACAACAGCGGCTAGGCTA 59.782 57.895 15.11 0.00 42.53 3.93
4594 8275 2.046892 CACAACAGCGGCTAGGCT 60.047 61.111 15.11 0.71 46.13 4.58
4595 8276 1.671054 TTCACAACAGCGGCTAGGC 60.671 57.895 6.15 6.15 0.00 3.93
4597 8278 0.944311 ACGTTCACAACAGCGGCTAG 60.944 55.000 0.26 0.00 0.00 3.42
4598 8279 0.531090 AACGTTCACAACAGCGGCTA 60.531 50.000 0.26 0.00 0.00 3.93
4599 8280 1.817941 AACGTTCACAACAGCGGCT 60.818 52.632 0.00 0.00 0.00 5.52
4601 8282 0.375454 TTCAACGTTCACAACAGCGG 59.625 50.000 0.00 0.00 0.00 5.52
4602 8283 1.062002 AGTTCAACGTTCACAACAGCG 59.938 47.619 13.86 0.00 0.00 5.18
4603 8284 2.825086 AGTTCAACGTTCACAACAGC 57.175 45.000 13.86 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.