Multiple sequence alignment - TraesCS3D01G090200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G090200 chr3D 100.000 4582 0 0 1 4582 45802387 45806968 0.000000e+00 8462.0
1 TraesCS3D01G090200 chr3D 100.000 67 0 0 4318 4384 45806637 45806703 1.730000e-24 124.0
2 TraesCS3D01G090200 chr3D 100.000 67 0 0 4251 4317 45806704 45806770 1.730000e-24 124.0
3 TraesCS3D01G090200 chr3D 100.000 37 0 0 4400 4436 45806742 45806778 8.230000e-08 69.4
4 TraesCS3D01G090200 chr3D 100.000 37 0 0 4356 4392 45806786 45806822 8.230000e-08 69.4
5 TraesCS3D01G090200 chr3D 100.000 29 0 0 4400 4428 45806675 45806703 2.000000e-03 54.7
6 TraesCS3D01G090200 chr3D 100.000 29 0 0 4289 4317 45806786 45806814 2.000000e-03 54.7
7 TraesCS3D01G090200 chr3B 92.788 3189 127 31 1 3114 71464032 71467192 0.000000e+00 4519.0
8 TraesCS3D01G090200 chr3B 91.865 1094 62 13 3110 4186 71467218 71468301 0.000000e+00 1502.0
9 TraesCS3D01G090200 chr3B 92.105 76 6 0 3459 3534 126559316 126559391 1.740000e-19 108.0
10 TraesCS3D01G090200 chr3A 89.286 2072 119 41 1 2020 57374316 57376336 0.000000e+00 2501.0
11 TraesCS3D01G090200 chr3A 96.875 576 17 1 2588 3162 57377225 57377800 0.000000e+00 963.0
12 TraesCS3D01G090200 chr3A 90.358 643 49 10 3197 3828 57377794 57378434 0.000000e+00 832.0
13 TraesCS3D01G090200 chr3A 93.151 511 19 7 1999 2504 57376690 57377189 0.000000e+00 736.0
14 TraesCS3D01G090200 chr3A 85.505 545 36 14 73 586 57368442 57368974 3.140000e-146 529.0
15 TraesCS3D01G090200 chr3A 86.667 270 18 10 707 971 57369056 57369312 2.700000e-72 283.0
16 TraesCS3D01G090200 chr3A 90.789 76 7 0 3459 3534 238346078 238346003 8.110000e-18 102.0
17 TraesCS3D01G090200 chr7D 83.234 167 24 3 4149 4315 237406726 237406564 2.860000e-32 150.0
18 TraesCS3D01G090200 chr7B 93.421 76 5 0 3459 3534 277980556 277980481 3.750000e-21 113.0
19 TraesCS3D01G090200 chr7B 92.105 76 6 0 3459 3534 209843707 209843782 1.740000e-19 108.0
20 TraesCS3D01G090200 chr2B 93.421 76 5 0 3459 3534 197538714 197538789 3.750000e-21 113.0
21 TraesCS3D01G090200 chr4B 90.789 76 7 0 3459 3534 208680093 208680168 8.110000e-18 102.0
22 TraesCS3D01G090200 chr2D 90.789 76 7 0 3459 3534 43858806 43858731 8.110000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G090200 chr3D 45802387 45806968 4581 False 1279.742857 8462 100.0000 1 4582 7 chr3D.!!$F1 4581
1 TraesCS3D01G090200 chr3B 71464032 71468301 4269 False 3010.500000 4519 92.3265 1 4186 2 chr3B.!!$F2 4185
2 TraesCS3D01G090200 chr3A 57374316 57378434 4118 False 1258.000000 2501 92.4175 1 3828 4 chr3A.!!$F2 3827
3 TraesCS3D01G090200 chr3A 57368442 57369312 870 False 406.000000 529 86.0860 73 971 2 chr3A.!!$F1 898

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
236 261 0.035056 CACCCTGGAATCAGACACCC 60.035 60.000 0.00 0.0 43.49 4.61 F
348 374 0.323542 AGTGAGACTGGTAGACGGGG 60.324 60.000 0.00 0.0 0.00 5.73 F
529 587 0.456221 ACGCGTTTCTCCGATCTGAT 59.544 50.000 5.58 0.0 0.00 2.90 F
1023 1100 0.766288 TCATGGACACCACTGACCCA 60.766 55.000 0.00 0.0 35.80 4.51 F
2584 3042 1.266989 GTGGTTTGGAGCTGTGCTAAC 59.733 52.381 0.00 0.0 39.88 2.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1766 1843 0.739813 ATCCGTCTTGCAAGCGTACC 60.740 55.000 28.59 13.14 0.00 3.34 R
2144 2595 1.496934 CGCAACAAACACCAAATCCC 58.503 50.000 0.00 0.00 0.00 3.85 R
2489 2947 6.782494 TCATATGGACTAGCTCAATAACCAGA 59.218 38.462 2.13 0.00 0.00 3.86 R
2841 3324 3.865745 GGATAATCCACTGAACACTGACG 59.134 47.826 0.00 0.00 36.28 4.35 R
4448 4984 0.035152 ATGCCATGGCTTCGTCTCAA 60.035 50.000 35.53 14.13 42.51 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.211045 TCCTTGGTGACACTTGTTTAGC 58.789 45.455 5.39 0.00 42.67 3.09
32 33 2.719531 TGGTGACACTTGTTTAGCCA 57.280 45.000 5.39 0.00 33.40 4.75
37 38 4.202111 GGTGACACTTGTTTAGCCACAAAT 60.202 41.667 5.39 0.00 36.22 2.32
101 103 2.745884 CGATTTGCGACTGCCCCA 60.746 61.111 0.00 0.00 44.57 4.96
161 166 3.041940 CGAGTCACCCACGCCAAC 61.042 66.667 0.00 0.00 0.00 3.77
185 190 1.066587 GGGAGAAGCGGAGATGTCG 59.933 63.158 0.00 0.00 0.00 4.35
236 261 0.035056 CACCCTGGAATCAGACACCC 60.035 60.000 0.00 0.00 43.49 4.61
348 374 0.323542 AGTGAGACTGGTAGACGGGG 60.324 60.000 0.00 0.00 0.00 5.73
368 394 4.436998 CCAGTCCACGACTCCCGC 62.437 72.222 0.00 0.00 41.37 6.13
369 395 4.436998 CAGTCCACGACTCCCGCC 62.437 72.222 0.00 0.00 41.37 6.13
529 587 0.456221 ACGCGTTTCTCCGATCTGAT 59.544 50.000 5.58 0.00 0.00 2.90
530 588 0.848942 CGCGTTTCTCCGATCTGATG 59.151 55.000 0.00 0.00 0.00 3.07
531 589 1.533965 CGCGTTTCTCCGATCTGATGA 60.534 52.381 0.00 0.00 0.00 2.92
613 671 1.166129 CCACTCTTCTTCTCGTCGGA 58.834 55.000 0.00 0.00 0.00 4.55
681 746 4.173924 GCTCTGCTCTGCTCCCCC 62.174 72.222 0.00 0.00 0.00 5.40
747 815 3.619483 TGTTACTGTTCTTGTGTTCCGTG 59.381 43.478 0.00 0.00 0.00 4.94
749 817 2.006888 ACTGTTCTTGTGTTCCGTGTG 58.993 47.619 0.00 0.00 0.00 3.82
750 818 1.330521 CTGTTCTTGTGTTCCGTGTGG 59.669 52.381 0.00 0.00 0.00 4.17
806 875 2.096019 CAGAGCTTCGTCTTTGCCTTTC 60.096 50.000 0.00 0.00 0.00 2.62
815 884 2.994643 CTTTGCCTTTCCCGTGGGGT 62.995 60.000 4.81 0.00 44.74 4.95
865 935 3.186909 TCACTGTTCGGCAAATATCTCG 58.813 45.455 0.00 0.00 0.00 4.04
983 1060 4.647424 AACATGTTGTCAATTTGGTCGT 57.353 36.364 11.07 0.00 0.00 4.34
1023 1100 0.766288 TCATGGACACCACTGACCCA 60.766 55.000 0.00 0.00 35.80 4.51
1077 1154 1.668101 CGACCTGGGTCTACTCCTGC 61.668 65.000 16.44 0.00 42.54 4.85
1148 1225 4.096003 CGGCAATGACGAGGGGGT 62.096 66.667 0.22 0.00 35.20 4.95
1200 1277 2.635915 ACCCGGAGTTGTGTATCTTGAA 59.364 45.455 0.73 0.00 0.00 2.69
1365 1442 2.428890 AGCTACTTCATCCTTCCTCGTG 59.571 50.000 0.00 0.00 0.00 4.35
1375 1452 1.404315 CCTTCCTCGTGTTACTGCCTC 60.404 57.143 0.00 0.00 0.00 4.70
1383 1460 2.731976 CGTGTTACTGCCTCTGAAGTTC 59.268 50.000 0.00 0.00 0.00 3.01
1658 1735 8.743714 TGTATAACATGCAATTTGTTGTATCCA 58.256 29.630 13.21 5.05 37.81 3.41
1750 1827 1.503818 GCTTGGTTCGGTGCTTTCGA 61.504 55.000 0.00 0.00 34.62 3.71
1766 1843 5.863935 TGCTTTCGATCTATGGATGTTATCG 59.136 40.000 0.00 0.00 40.49 2.92
1860 1937 5.416083 ACATACGACGATTCCATCAAAAGA 58.584 37.500 0.00 0.00 0.00 2.52
1943 2020 8.956426 GTTCCAGATTATGTTTCAGGTAATTCA 58.044 33.333 0.00 0.00 0.00 2.57
1999 2076 5.403897 TTCTGAGTTTTAACTGCTGAACG 57.596 39.130 0.00 0.00 39.88 3.95
2020 2097 3.751175 CGGTAGGTGTGTTGTGATTGATT 59.249 43.478 0.00 0.00 0.00 2.57
2144 2595 3.438087 GGCCGATGAATGGTGATGATTAG 59.562 47.826 0.00 0.00 0.00 1.73
2489 2947 2.972153 AGGACCCCTCTAGTTCCATT 57.028 50.000 0.00 0.00 0.00 3.16
2584 3042 1.266989 GTGGTTTGGAGCTGTGCTAAC 59.733 52.381 0.00 0.00 39.88 2.34
2622 3105 6.280855 TCTTTGCTGCATGTCTTACTACTA 57.719 37.500 1.84 0.00 0.00 1.82
2726 3209 2.795329 CCTGGTAAATGTCTTGTGCCT 58.205 47.619 0.00 0.00 0.00 4.75
2735 3218 8.507249 GGTAAATGTCTTGTGCCTGAATATATC 58.493 37.037 0.00 0.00 0.00 1.63
2736 3219 9.056005 GTAAATGTCTTGTGCCTGAATATATCA 57.944 33.333 0.00 0.00 36.38 2.15
2799 3282 3.560503 TCTAAAATTGCAGCGTTTTCCG 58.439 40.909 10.59 5.58 40.40 4.30
2841 3324 0.250901 TGCTCTGGACAGGCCTTTTC 60.251 55.000 0.00 1.68 37.63 2.29
2859 3342 3.469008 TTCGTCAGTGTTCAGTGGATT 57.531 42.857 7.63 0.00 0.00 3.01
3157 3674 6.152323 AGCATGCATAAGTCAAGAATGAACTT 59.848 34.615 21.98 0.00 37.30 2.66
3159 3676 7.642978 GCATGCATAAGTCAAGAATGAACTTAG 59.357 37.037 14.21 0.00 37.30 2.18
3189 3706 5.235186 CCGCAGTTGATAGATTTCCTTACTG 59.765 44.000 0.00 0.00 0.00 2.74
3195 3712 7.121315 AGTTGATAGATTTCCTTACTGGTTTGC 59.879 37.037 0.00 0.00 37.07 3.68
3200 3717 6.311735 AGATTTCCTTACTGGTTTGCCTTAA 58.688 36.000 0.00 0.00 37.07 1.85
3254 3774 4.787135 ACATTTTGGGGTCAACCATTTT 57.213 36.364 0.89 0.00 40.91 1.82
3257 3777 3.567478 TTTGGGGTCAACCATTTTTGG 57.433 42.857 0.89 0.00 40.91 3.28
3320 3840 9.236006 ACAGCTTCATAATCTGATTACTGTTTT 57.764 29.630 17.82 0.75 37.92 2.43
3339 3859 9.476202 ACTGTTTTAGGTTCTTGCATAAATTTC 57.524 29.630 0.00 0.00 0.00 2.17
3342 3862 8.635983 GTTTTAGGTTCTTGCATAAATTTCGAC 58.364 33.333 0.00 0.00 0.00 4.20
3350 3875 5.697473 TGCATAAATTTCGACTGGTTCAA 57.303 34.783 0.00 0.00 0.00 2.69
3355 3880 7.201435 GCATAAATTTCGACTGGTTCAAAATCC 60.201 37.037 0.00 0.00 0.00 3.01
3359 3884 5.432885 TTCGACTGGTTCAAAATCCTTTC 57.567 39.130 0.00 0.00 0.00 2.62
3369 3894 8.098286 TGGTTCAAAATCCTTTCGAGATACTTA 58.902 33.333 0.00 0.00 0.00 2.24
3423 3949 8.194769 CCATTACTGTTTGAACTTGTAACCTTT 58.805 33.333 11.85 0.50 34.33 3.11
3430 3956 4.134563 TGAACTTGTAACCTTTCTGCCTC 58.865 43.478 0.00 0.00 0.00 4.70
3437 3963 1.322442 ACCTTTCTGCCTCAAACTGC 58.678 50.000 0.00 0.00 0.00 4.40
3509 4035 5.073144 TCACTTCCCTTGTTATGGTCTCTTT 59.927 40.000 0.00 0.00 0.00 2.52
3518 4044 4.288626 TGTTATGGTCTCTTTGCCCTAGTT 59.711 41.667 0.00 0.00 0.00 2.24
3620 4147 7.563188 ACATATACTGGCACAATTTATTCCCAA 59.437 33.333 0.00 0.00 38.70 4.12
3624 4151 6.541907 ACTGGCACAATTTATTCCCAATTTT 58.458 32.000 0.00 0.00 38.70 1.82
3785 4313 2.739913 CCACGACGTATGTTCACCAAAT 59.260 45.455 0.00 0.00 0.00 2.32
3786 4314 3.187637 CCACGACGTATGTTCACCAAATT 59.812 43.478 0.00 0.00 0.00 1.82
3814 4342 4.142881 GGGATGCGTAGTTTCTTTGAAGTC 60.143 45.833 0.00 0.00 0.00 3.01
3860 4388 4.872124 GGGGAATTTTGTGCAATCTGAATC 59.128 41.667 0.00 0.00 0.00 2.52
3909 4437 4.802999 AGCTGCTTTAGTTGCATTTCTTC 58.197 39.130 0.00 0.00 39.86 2.87
3915 4443 5.048434 GCTTTAGTTGCATTTCTTCTCCTGT 60.048 40.000 0.00 0.00 0.00 4.00
3936 4464 1.133976 CCTGCTATTTGCCTAGCCAGT 60.134 52.381 7.37 0.00 42.85 4.00
4029 4557 1.301244 CAGAGAGCAACGCTGGTGT 60.301 57.895 0.00 0.00 39.88 4.16
4070 4598 2.358898 GCTGTGATCAAACCACAACACT 59.641 45.455 0.00 0.00 43.07 3.55
4071 4599 3.793129 GCTGTGATCAAACCACAACACTG 60.793 47.826 0.00 0.00 43.07 3.66
4072 4600 2.098934 TGTGATCAAACCACAACACTGC 59.901 45.455 0.00 0.00 41.07 4.40
4073 4601 2.098934 GTGATCAAACCACAACACTGCA 59.901 45.455 0.00 0.00 34.81 4.41
4074 4602 2.098934 TGATCAAACCACAACACTGCAC 59.901 45.455 0.00 0.00 0.00 4.57
4075 4603 0.814457 TCAAACCACAACACTGCACC 59.186 50.000 0.00 0.00 0.00 5.01
4076 4604 0.525242 CAAACCACAACACTGCACCG 60.525 55.000 0.00 0.00 0.00 4.94
4077 4605 0.963355 AAACCACAACACTGCACCGT 60.963 50.000 0.00 0.00 0.00 4.83
4096 4624 2.350772 CGTTGACACAATCCAAAGGCTC 60.351 50.000 0.00 0.00 0.00 4.70
4097 4625 2.887152 GTTGACACAATCCAAAGGCTCT 59.113 45.455 0.00 0.00 0.00 4.09
4141 4669 1.300697 GTGGTGTCGTGGGACTCAC 60.301 63.158 0.00 0.00 43.79 3.51
4194 4730 3.119193 CACCTGTGTGCCACCAAC 58.881 61.111 0.00 0.00 35.31 3.77
4195 4731 2.515991 ACCTGTGTGCCACCAACG 60.516 61.111 0.00 0.00 32.73 4.10
4196 4732 2.515991 CCTGTGTGCCACCAACGT 60.516 61.111 0.00 0.00 32.73 3.99
4197 4733 1.227704 CCTGTGTGCCACCAACGTA 60.228 57.895 0.00 0.00 32.73 3.57
4198 4734 1.227999 CCTGTGTGCCACCAACGTAG 61.228 60.000 0.00 0.00 32.73 3.51
4199 4735 0.531974 CTGTGTGCCACCAACGTAGT 60.532 55.000 0.00 0.00 36.13 2.73
4200 4736 0.531090 TGTGTGCCACCAACGTAGTC 60.531 55.000 0.00 0.00 33.88 2.59
4201 4737 1.300311 TGTGCCACCAACGTAGTCG 60.300 57.895 0.00 0.00 45.00 4.18
4202 4738 1.007038 GTGCCACCAACGTAGTCGA 60.007 57.895 0.00 0.00 45.00 4.20
4203 4739 1.007336 GTGCCACCAACGTAGTCGAG 61.007 60.000 0.00 0.00 45.00 4.04
4204 4740 1.445582 GCCACCAACGTAGTCGAGG 60.446 63.158 0.00 0.00 45.00 4.63
4205 4741 1.214589 CCACCAACGTAGTCGAGGG 59.785 63.158 0.00 0.00 45.00 4.30
4206 4742 1.214589 CACCAACGTAGTCGAGGGG 59.785 63.158 0.00 0.00 45.00 4.79
4207 4743 2.183555 CCAACGTAGTCGAGGGGC 59.816 66.667 0.00 0.00 45.00 5.80
4208 4744 2.642254 CCAACGTAGTCGAGGGGCA 61.642 63.158 0.00 0.00 45.00 5.36
4209 4745 1.515954 CAACGTAGTCGAGGGGCAT 59.484 57.895 0.00 0.00 45.00 4.40
4210 4746 0.527817 CAACGTAGTCGAGGGGCATC 60.528 60.000 0.00 0.00 45.00 3.91
4211 4747 2.001361 AACGTAGTCGAGGGGCATCG 62.001 60.000 5.12 5.12 45.00 3.84
4212 4748 2.027751 GTAGTCGAGGGGCATCGC 59.972 66.667 6.49 2.94 42.43 4.58
4222 4758 3.111038 GGCATCGCCTAGCAAACC 58.889 61.111 0.00 0.00 46.69 3.27
4223 4759 1.748879 GGCATCGCCTAGCAAACCA 60.749 57.895 0.00 0.00 46.69 3.67
4224 4760 1.312371 GGCATCGCCTAGCAAACCAA 61.312 55.000 0.00 0.00 46.69 3.67
4225 4761 0.525761 GCATCGCCTAGCAAACCAAA 59.474 50.000 0.00 0.00 0.00 3.28
4226 4762 1.732405 GCATCGCCTAGCAAACCAAAC 60.732 52.381 0.00 0.00 0.00 2.93
4227 4763 1.135402 CATCGCCTAGCAAACCAAACC 60.135 52.381 0.00 0.00 0.00 3.27
4228 4764 0.179015 TCGCCTAGCAAACCAAACCA 60.179 50.000 0.00 0.00 0.00 3.67
4229 4765 0.240945 CGCCTAGCAAACCAAACCAG 59.759 55.000 0.00 0.00 0.00 4.00
4230 4766 0.603065 GCCTAGCAAACCAAACCAGG 59.397 55.000 0.00 0.00 0.00 4.45
4231 4767 1.995376 CCTAGCAAACCAAACCAGGT 58.005 50.000 0.00 0.00 45.91 4.00
4232 4768 1.886542 CCTAGCAAACCAAACCAGGTC 59.113 52.381 0.00 0.00 42.25 3.85
4233 4769 2.582052 CTAGCAAACCAAACCAGGTCA 58.418 47.619 0.00 0.00 42.25 4.02
4234 4770 2.086610 AGCAAACCAAACCAGGTCAT 57.913 45.000 0.00 0.00 42.25 3.06
4235 4771 2.397597 AGCAAACCAAACCAGGTCATT 58.602 42.857 0.00 0.00 42.25 2.57
4236 4772 2.102925 AGCAAACCAAACCAGGTCATTG 59.897 45.455 0.00 0.00 42.25 2.82
4237 4773 2.482864 CAAACCAAACCAGGTCATTGC 58.517 47.619 0.00 0.00 42.25 3.56
4238 4774 1.786937 AACCAAACCAGGTCATTGCA 58.213 45.000 0.00 0.00 42.25 4.08
4239 4775 2.014010 ACCAAACCAGGTCATTGCAT 57.986 45.000 0.00 0.00 37.28 3.96
4240 4776 1.895131 ACCAAACCAGGTCATTGCATC 59.105 47.619 0.00 0.00 37.28 3.91
4241 4777 1.135315 CCAAACCAGGTCATTGCATCG 60.135 52.381 0.00 0.00 0.00 3.84
4242 4778 1.541147 CAAACCAGGTCATTGCATCGT 59.459 47.619 0.00 0.00 0.00 3.73
4243 4779 1.909700 AACCAGGTCATTGCATCGTT 58.090 45.000 0.00 0.00 0.00 3.85
4244 4780 1.167851 ACCAGGTCATTGCATCGTTG 58.832 50.000 0.00 0.00 0.00 4.10
4245 4781 1.271325 ACCAGGTCATTGCATCGTTGA 60.271 47.619 0.00 0.00 0.00 3.18
4246 4782 2.019249 CCAGGTCATTGCATCGTTGAT 58.981 47.619 0.00 0.00 0.00 2.57
4247 4783 2.223409 CCAGGTCATTGCATCGTTGATG 60.223 50.000 2.45 2.45 42.37 3.07
4248 4784 2.421073 CAGGTCATTGCATCGTTGATGT 59.579 45.455 8.44 0.00 41.60 3.06
4249 4785 3.622612 CAGGTCATTGCATCGTTGATGTA 59.377 43.478 8.44 1.25 41.60 2.29
4250 4786 3.873361 AGGTCATTGCATCGTTGATGTAG 59.127 43.478 8.44 0.00 41.60 2.74
4251 4787 3.623060 GGTCATTGCATCGTTGATGTAGT 59.377 43.478 8.44 0.00 41.60 2.73
4252 4788 4.260375 GGTCATTGCATCGTTGATGTAGTC 60.260 45.833 8.44 0.00 41.60 2.59
4253 4789 3.551485 TCATTGCATCGTTGATGTAGTCG 59.449 43.478 8.44 0.00 41.60 4.18
4254 4790 2.931512 TGCATCGTTGATGTAGTCGA 57.068 45.000 8.44 0.00 41.60 4.20
4255 4791 3.224884 TGCATCGTTGATGTAGTCGAA 57.775 42.857 8.44 0.00 41.60 3.71
4256 4792 3.580731 TGCATCGTTGATGTAGTCGAAA 58.419 40.909 8.44 0.00 41.60 3.46
4257 4793 3.612423 TGCATCGTTGATGTAGTCGAAAG 59.388 43.478 8.44 0.00 41.60 2.62
4258 4794 3.000322 GCATCGTTGATGTAGTCGAAAGG 60.000 47.826 8.44 0.00 41.60 3.11
4259 4795 2.602878 TCGTTGATGTAGTCGAAAGGC 58.397 47.619 0.00 0.00 0.00 4.35
4260 4796 1.320555 CGTTGATGTAGTCGAAAGGCG 59.679 52.381 0.00 0.00 43.49 5.52
4261 4797 2.334838 GTTGATGTAGTCGAAAGGCGT 58.665 47.619 0.00 0.00 43.49 5.68
4262 4798 2.273370 TGATGTAGTCGAAAGGCGTC 57.727 50.000 0.00 0.00 43.49 5.19
4263 4799 1.189403 GATGTAGTCGAAAGGCGTCG 58.811 55.000 7.23 7.23 43.49 5.12
4264 4800 0.801067 ATGTAGTCGAAAGGCGTCGC 60.801 55.000 9.22 9.22 43.49 5.19
4265 4801 2.202388 TAGTCGAAAGGCGTCGCG 60.202 61.111 11.75 0.00 43.49 5.87
4276 4812 3.463505 CGTCGCGCATTCAAGACT 58.536 55.556 8.75 0.00 0.00 3.24
4277 4813 1.057822 CGTCGCGCATTCAAGACTG 59.942 57.895 8.75 0.00 0.00 3.51
4278 4814 1.225854 GTCGCGCATTCAAGACTGC 60.226 57.895 8.75 2.65 35.02 4.40
4279 4815 1.667510 TCGCGCATTCAAGACTGCA 60.668 52.632 8.75 0.00 38.30 4.41
4280 4816 1.510623 CGCGCATTCAAGACTGCAC 60.511 57.895 8.75 2.43 38.30 4.57
4281 4817 1.575922 GCGCATTCAAGACTGCACA 59.424 52.632 0.30 0.00 38.30 4.57
4282 4818 0.040157 GCGCATTCAAGACTGCACAA 60.040 50.000 0.30 0.00 38.30 3.33
4283 4819 1.678360 CGCATTCAAGACTGCACAAC 58.322 50.000 12.02 0.00 38.30 3.32
4284 4820 1.678360 GCATTCAAGACTGCACAACG 58.322 50.000 7.43 0.00 38.28 4.10
4285 4821 1.678360 CATTCAAGACTGCACAACGC 58.322 50.000 0.00 0.00 42.89 4.84
4286 4822 0.593128 ATTCAAGACTGCACAACGCC 59.407 50.000 0.00 0.00 41.33 5.68
4287 4823 1.771073 TTCAAGACTGCACAACGCCG 61.771 55.000 0.00 0.00 41.33 6.46
4288 4824 3.649986 AAGACTGCACAACGCCGC 61.650 61.111 0.00 0.00 41.33 6.53
4289 4825 4.908687 AGACTGCACAACGCCGCA 62.909 61.111 0.00 0.00 41.33 5.69
4290 4826 3.947841 GACTGCACAACGCCGCAA 61.948 61.111 0.00 0.00 41.33 4.85
4291 4827 4.250431 ACTGCACAACGCCGCAAC 62.250 61.111 0.00 0.00 41.33 4.17
4292 4828 4.249020 CTGCACAACGCCGCAACA 62.249 61.111 0.00 0.00 41.33 3.33
4293 4829 4.544689 TGCACAACGCCGCAACAC 62.545 61.111 0.00 0.00 41.33 3.32
4295 4831 3.582120 CACAACGCCGCAACACCT 61.582 61.111 0.00 0.00 0.00 4.00
4296 4832 3.276846 ACAACGCCGCAACACCTC 61.277 61.111 0.00 0.00 0.00 3.85
4297 4833 3.276091 CAACGCCGCAACACCTCA 61.276 61.111 0.00 0.00 0.00 3.86
4298 4834 2.281484 AACGCCGCAACACCTCAT 60.281 55.556 0.00 0.00 0.00 2.90
4299 4835 2.616330 AACGCCGCAACACCTCATG 61.616 57.895 0.00 0.00 0.00 3.07
4300 4836 3.049674 CGCCGCAACACCTCATGT 61.050 61.111 0.00 0.00 46.42 3.21
4311 4847 2.699954 CACCTCATGTGTCAAGGGTAC 58.300 52.381 2.73 0.00 40.26 3.34
4312 4848 2.038426 CACCTCATGTGTCAAGGGTACA 59.962 50.000 2.73 0.00 40.26 2.90
4313 4849 2.912956 ACCTCATGTGTCAAGGGTACAT 59.087 45.455 2.73 0.00 35.56 2.29
4314 4850 3.330701 ACCTCATGTGTCAAGGGTACATT 59.669 43.478 2.73 0.00 33.06 2.71
4315 4851 3.941483 CCTCATGTGTCAAGGGTACATTC 59.059 47.826 0.00 0.00 33.06 2.67
4316 4852 3.595173 TCATGTGTCAAGGGTACATTCG 58.405 45.455 0.00 0.00 33.06 3.34
4317 4853 2.465860 TGTGTCAAGGGTACATTCGG 57.534 50.000 0.00 0.00 0.00 4.30
4318 4854 1.695242 TGTGTCAAGGGTACATTCGGT 59.305 47.619 0.00 0.00 0.00 4.69
4319 4855 2.289195 TGTGTCAAGGGTACATTCGGTC 60.289 50.000 0.00 0.00 0.00 4.79
4320 4856 1.067425 TGTCAAGGGTACATTCGGTCG 60.067 52.381 0.00 0.00 0.00 4.79
4321 4857 1.203052 GTCAAGGGTACATTCGGTCGA 59.797 52.381 0.00 0.00 0.00 4.20
4322 4858 1.894466 TCAAGGGTACATTCGGTCGAA 59.106 47.619 8.27 8.27 38.59 3.71
4323 4859 2.299582 TCAAGGGTACATTCGGTCGAAA 59.700 45.455 9.88 0.00 37.69 3.46
4324 4860 2.667473 AGGGTACATTCGGTCGAAAG 57.333 50.000 9.88 8.21 37.69 2.62
4325 4861 1.206371 AGGGTACATTCGGTCGAAAGG 59.794 52.381 9.88 7.98 37.69 3.11
4326 4862 1.004595 GGTACATTCGGTCGAAAGGC 58.995 55.000 9.88 3.87 37.69 4.35
4327 4863 0.643820 GTACATTCGGTCGAAAGGCG 59.356 55.000 9.88 2.56 37.69 5.52
4328 4864 0.244450 TACATTCGGTCGAAAGGCGT 59.756 50.000 9.88 7.68 41.80 5.68
4329 4865 1.012486 ACATTCGGTCGAAAGGCGTC 61.012 55.000 9.88 0.00 41.80 5.19
4330 4866 1.804326 ATTCGGTCGAAAGGCGTCG 60.804 57.895 9.88 7.23 42.48 5.12
4343 4879 3.463505 CGTCGCGCATTCAAGACT 58.536 55.556 8.75 0.00 0.00 3.24
4344 4880 1.057822 CGTCGCGCATTCAAGACTG 59.942 57.895 8.75 0.00 0.00 3.51
4345 4881 1.225854 GTCGCGCATTCAAGACTGC 60.226 57.895 8.75 2.65 35.02 4.40
4346 4882 1.667510 TCGCGCATTCAAGACTGCA 60.668 52.632 8.75 0.00 38.30 4.41
4347 4883 1.510623 CGCGCATTCAAGACTGCAC 60.511 57.895 8.75 2.43 38.30 4.57
4348 4884 1.575922 GCGCATTCAAGACTGCACA 59.424 52.632 0.30 0.00 38.30 4.57
4349 4885 0.040157 GCGCATTCAAGACTGCACAA 60.040 50.000 0.30 0.00 38.30 3.33
4350 4886 1.678360 CGCATTCAAGACTGCACAAC 58.322 50.000 12.02 0.00 38.30 3.32
4351 4887 1.678360 GCATTCAAGACTGCACAACG 58.322 50.000 7.43 0.00 38.28 4.10
4352 4888 1.678360 CATTCAAGACTGCACAACGC 58.322 50.000 0.00 0.00 42.89 4.84
4353 4889 0.593128 ATTCAAGACTGCACAACGCC 59.407 50.000 0.00 0.00 41.33 5.68
4354 4890 1.771073 TTCAAGACTGCACAACGCCG 61.771 55.000 0.00 0.00 41.33 6.46
4355 4891 3.649986 AAGACTGCACAACGCCGC 61.650 61.111 0.00 0.00 41.33 6.53
4356 4892 4.908687 AGACTGCACAACGCCGCA 62.909 61.111 0.00 0.00 41.33 5.69
4357 4893 3.947841 GACTGCACAACGCCGCAA 61.948 61.111 0.00 0.00 41.33 4.85
4358 4894 4.250431 ACTGCACAACGCCGCAAC 62.250 61.111 0.00 0.00 41.33 4.17
4359 4895 4.249020 CTGCACAACGCCGCAACA 62.249 61.111 0.00 0.00 41.33 3.33
4360 4896 4.544689 TGCACAACGCCGCAACAC 62.545 61.111 0.00 0.00 41.33 3.32
4362 4898 3.582120 CACAACGCCGCAACACCT 61.582 61.111 0.00 0.00 0.00 4.00
4363 4899 3.276846 ACAACGCCGCAACACCTC 61.277 61.111 0.00 0.00 0.00 3.85
4364 4900 3.276091 CAACGCCGCAACACCTCA 61.276 61.111 0.00 0.00 0.00 3.86
4365 4901 2.281484 AACGCCGCAACACCTCAT 60.281 55.556 0.00 0.00 0.00 2.90
4366 4902 2.616330 AACGCCGCAACACCTCATG 61.616 57.895 0.00 0.00 0.00 3.07
4367 4903 3.049674 CGCCGCAACACCTCATGT 61.050 61.111 0.00 0.00 46.42 3.21
4378 4914 2.699954 CACCTCATGTGTCAAGGGTAC 58.300 52.381 2.73 0.00 40.26 3.34
4379 4915 2.038426 CACCTCATGTGTCAAGGGTACA 59.962 50.000 2.73 0.00 40.26 2.90
4380 4916 2.912956 ACCTCATGTGTCAAGGGTACAT 59.087 45.455 2.73 0.00 35.56 2.29
4381 4917 3.330701 ACCTCATGTGTCAAGGGTACATT 59.669 43.478 2.73 0.00 33.06 2.71
4382 4918 3.941483 CCTCATGTGTCAAGGGTACATTC 59.059 47.826 0.00 0.00 33.06 2.67
4383 4919 3.595173 TCATGTGTCAAGGGTACATTCG 58.405 45.455 0.00 0.00 33.06 3.34
4384 4920 3.259625 TCATGTGTCAAGGGTACATTCGA 59.740 43.478 0.00 0.00 33.06 3.71
4385 4921 3.755112 TGTGTCAAGGGTACATTCGAA 57.245 42.857 0.00 0.00 0.00 3.71
4386 4922 4.074627 TGTGTCAAGGGTACATTCGAAA 57.925 40.909 0.00 0.00 0.00 3.46
4387 4923 4.062293 TGTGTCAAGGGTACATTCGAAAG 58.938 43.478 0.00 0.00 0.00 2.62
4388 4924 3.435671 GTGTCAAGGGTACATTCGAAAGG 59.564 47.826 0.00 0.00 0.00 3.11
4389 4925 3.007635 GTCAAGGGTACATTCGAAAGGG 58.992 50.000 0.00 0.00 0.00 3.95
4390 4926 1.743394 CAAGGGTACATTCGAAAGGGC 59.257 52.381 0.00 0.00 0.00 5.19
4391 4927 0.988832 AGGGTACATTCGAAAGGGCA 59.011 50.000 0.00 0.00 0.00 5.36
4392 4928 1.092348 GGGTACATTCGAAAGGGCAC 58.908 55.000 0.00 0.00 0.00 5.01
4393 4929 1.612199 GGGTACATTCGAAAGGGCACA 60.612 52.381 0.00 0.00 0.00 4.57
4394 4930 1.467342 GGTACATTCGAAAGGGCACAC 59.533 52.381 0.00 0.00 0.00 3.82
4395 4931 2.147958 GTACATTCGAAAGGGCACACA 58.852 47.619 0.00 0.00 0.00 3.72
4396 4932 1.686355 ACATTCGAAAGGGCACACAA 58.314 45.000 0.00 0.00 0.00 3.33
4397 4933 1.608590 ACATTCGAAAGGGCACACAAG 59.391 47.619 0.00 0.00 0.00 3.16
4398 4934 1.879380 CATTCGAAAGGGCACACAAGA 59.121 47.619 0.00 0.00 0.00 3.02
4399 4935 1.305201 TTCGAAAGGGCACACAAGAC 58.695 50.000 0.00 0.00 0.00 3.01
4400 4936 0.179234 TCGAAAGGGCACACAAGACA 59.821 50.000 0.00 0.00 0.00 3.41
4401 4937 1.021202 CGAAAGGGCACACAAGACAA 58.979 50.000 0.00 0.00 0.00 3.18
4402 4938 1.268539 CGAAAGGGCACACAAGACAAC 60.269 52.381 0.00 0.00 0.00 3.32
4403 4939 1.748493 GAAAGGGCACACAAGACAACA 59.252 47.619 0.00 0.00 0.00 3.33
4404 4940 1.102978 AAGGGCACACAAGACAACAC 58.897 50.000 0.00 0.00 0.00 3.32
4405 4941 0.751643 AGGGCACACAAGACAACACC 60.752 55.000 0.00 0.00 0.00 4.16
4406 4942 0.751643 GGGCACACAAGACAACACCT 60.752 55.000 0.00 0.00 0.00 4.00
4407 4943 0.663153 GGCACACAAGACAACACCTC 59.337 55.000 0.00 0.00 0.00 3.85
4408 4944 1.378531 GCACACAAGACAACACCTCA 58.621 50.000 0.00 0.00 0.00 3.86
4409 4945 1.949525 GCACACAAGACAACACCTCAT 59.050 47.619 0.00 0.00 0.00 2.90
4410 4946 2.287188 GCACACAAGACAACACCTCATG 60.287 50.000 0.00 0.00 0.00 3.07
4411 4947 2.945008 CACACAAGACAACACCTCATGT 59.055 45.455 0.00 0.00 46.42 3.21
4422 4958 2.699954 CACCTCATGTGTCAAGGGTAC 58.300 52.381 2.73 0.00 40.26 3.34
4423 4959 2.038426 CACCTCATGTGTCAAGGGTACA 59.962 50.000 2.73 0.00 40.26 2.90
4424 4960 2.912956 ACCTCATGTGTCAAGGGTACAT 59.087 45.455 2.73 0.00 35.56 2.29
4425 4961 3.330701 ACCTCATGTGTCAAGGGTACATT 59.669 43.478 2.73 0.00 33.06 2.71
4426 4962 3.941483 CCTCATGTGTCAAGGGTACATTC 59.059 47.826 0.00 0.00 33.06 2.67
4427 4963 3.595173 TCATGTGTCAAGGGTACATTCG 58.405 45.455 0.00 0.00 33.06 3.34
4428 4964 3.259625 TCATGTGTCAAGGGTACATTCGA 59.740 43.478 0.00 0.00 33.06 3.71
4429 4965 3.755112 TGTGTCAAGGGTACATTCGAA 57.245 42.857 0.00 0.00 0.00 3.71
4430 4966 4.074627 TGTGTCAAGGGTACATTCGAAA 57.925 40.909 0.00 0.00 0.00 3.46
4431 4967 4.062293 TGTGTCAAGGGTACATTCGAAAG 58.938 43.478 0.00 0.00 0.00 2.62
4432 4968 3.435671 GTGTCAAGGGTACATTCGAAAGG 59.564 47.826 0.00 0.00 0.00 3.11
4433 4969 3.007635 GTCAAGGGTACATTCGAAAGGG 58.992 50.000 0.00 0.00 0.00 3.95
4434 4970 1.743394 CAAGGGTACATTCGAAAGGGC 59.257 52.381 0.00 0.00 0.00 5.19
4435 4971 0.988832 AGGGTACATTCGAAAGGGCA 59.011 50.000 0.00 0.00 0.00 5.36
4436 4972 1.065418 AGGGTACATTCGAAAGGGCAG 60.065 52.381 0.00 0.00 0.00 4.85
4437 4973 1.379527 GGTACATTCGAAAGGGCAGG 58.620 55.000 0.00 0.00 0.00 4.85
4438 4974 1.379527 GTACATTCGAAAGGGCAGGG 58.620 55.000 0.00 0.00 0.00 4.45
4439 4975 0.393808 TACATTCGAAAGGGCAGGGC 60.394 55.000 0.00 0.00 0.00 5.19
4440 4976 1.678635 CATTCGAAAGGGCAGGGCA 60.679 57.895 0.00 0.00 0.00 5.36
4441 4977 1.678970 ATTCGAAAGGGCAGGGCAC 60.679 57.895 0.00 0.00 0.00 5.01
4442 4978 2.424842 ATTCGAAAGGGCAGGGCACA 62.425 55.000 0.00 0.00 32.33 4.57
4443 4979 3.365265 CGAAAGGGCAGGGCACAC 61.365 66.667 0.00 0.00 32.33 3.82
4444 4980 2.203480 GAAAGGGCAGGGCACACA 60.203 61.111 0.00 0.00 32.33 3.72
4445 4981 1.832167 GAAAGGGCAGGGCACACAA 60.832 57.895 0.00 0.00 32.33 3.33
4446 4982 1.809567 GAAAGGGCAGGGCACACAAG 61.810 60.000 0.00 0.00 32.33 3.16
4447 4983 3.815407 AAGGGCAGGGCACACAAGG 62.815 63.158 0.00 0.00 32.33 3.61
4448 4984 4.603535 GGGCAGGGCACACAAGGT 62.604 66.667 0.00 0.00 0.00 3.50
4449 4985 2.521708 GGCAGGGCACACAAGGTT 60.522 61.111 0.00 0.00 0.00 3.50
4450 4986 2.730094 GCAGGGCACACAAGGTTG 59.270 61.111 0.00 0.00 0.00 3.77
4451 4987 1.827789 GCAGGGCACACAAGGTTGA 60.828 57.895 0.00 0.00 0.00 3.18
4452 4988 1.799258 GCAGGGCACACAAGGTTGAG 61.799 60.000 0.00 0.00 0.00 3.02
4453 4989 0.179020 CAGGGCACACAAGGTTGAGA 60.179 55.000 0.00 0.00 0.00 3.27
4454 4990 0.179018 AGGGCACACAAGGTTGAGAC 60.179 55.000 0.00 0.00 0.00 3.36
4455 4991 1.507141 GGGCACACAAGGTTGAGACG 61.507 60.000 0.00 0.00 0.00 4.18
4456 4992 0.531974 GGCACACAAGGTTGAGACGA 60.532 55.000 0.00 0.00 0.00 4.20
4457 4993 1.295792 GCACACAAGGTTGAGACGAA 58.704 50.000 0.00 0.00 0.00 3.85
4458 4994 1.261619 GCACACAAGGTTGAGACGAAG 59.738 52.381 0.00 0.00 0.00 3.79
4459 4995 1.261619 CACACAAGGTTGAGACGAAGC 59.738 52.381 0.00 0.00 0.00 3.86
4460 4996 0.868406 CACAAGGTTGAGACGAAGCC 59.132 55.000 0.00 0.00 0.00 4.35
4461 4997 0.468226 ACAAGGTTGAGACGAAGCCA 59.532 50.000 0.00 0.00 0.00 4.75
4462 4998 1.072331 ACAAGGTTGAGACGAAGCCAT 59.928 47.619 0.00 0.00 0.00 4.40
4463 4999 1.466167 CAAGGTTGAGACGAAGCCATG 59.534 52.381 0.00 0.00 0.00 3.66
4464 5000 0.036010 AGGTTGAGACGAAGCCATGG 60.036 55.000 7.63 7.63 0.00 3.66
4465 5001 1.648467 GGTTGAGACGAAGCCATGGC 61.648 60.000 30.12 30.12 42.33 4.40
4466 5002 0.955428 GTTGAGACGAAGCCATGGCA 60.955 55.000 37.18 12.49 44.88 4.92
4467 5003 0.035152 TTGAGACGAAGCCATGGCAT 60.035 50.000 37.18 27.80 44.88 4.40
4468 5004 0.829990 TGAGACGAAGCCATGGCATA 59.170 50.000 37.18 7.69 44.88 3.14
4469 5005 1.417517 TGAGACGAAGCCATGGCATAT 59.582 47.619 37.18 23.14 44.88 1.78
4470 5006 1.802960 GAGACGAAGCCATGGCATATG 59.197 52.381 37.18 24.69 44.88 1.78
4471 5007 1.141657 AGACGAAGCCATGGCATATGT 59.858 47.619 37.18 27.54 44.88 2.29
4472 5008 1.265095 GACGAAGCCATGGCATATGTG 59.735 52.381 37.18 21.65 44.88 3.21
4473 5009 1.311859 CGAAGCCATGGCATATGTGT 58.688 50.000 37.18 13.31 44.88 3.72
4474 5010 1.265095 CGAAGCCATGGCATATGTGTC 59.735 52.381 37.18 19.60 44.88 3.67
4475 5011 1.610522 GAAGCCATGGCATATGTGTCC 59.389 52.381 37.18 9.15 44.88 4.02
4476 5012 0.178981 AGCCATGGCATATGTGTCCC 60.179 55.000 37.18 4.41 44.88 4.46
4477 5013 1.518056 GCCATGGCATATGTGTCCCG 61.518 60.000 32.08 0.00 41.49 5.14
4478 5014 0.108396 CCATGGCATATGTGTCCCGA 59.892 55.000 0.00 0.00 0.00 5.14
4479 5015 1.476652 CCATGGCATATGTGTCCCGAA 60.477 52.381 0.00 0.00 0.00 4.30
4480 5016 1.603802 CATGGCATATGTGTCCCGAAC 59.396 52.381 0.00 0.00 0.00 3.95
4481 5017 0.615850 TGGCATATGTGTCCCGAACA 59.384 50.000 4.29 0.00 34.78 3.18
4482 5018 1.211703 TGGCATATGTGTCCCGAACAT 59.788 47.619 4.29 0.00 40.80 2.71
4483 5019 1.603802 GGCATATGTGTCCCGAACATG 59.396 52.381 4.29 0.00 40.80 3.21
4484 5020 2.560504 GCATATGTGTCCCGAACATGA 58.439 47.619 0.00 0.00 40.80 3.07
4485 5021 2.545526 GCATATGTGTCCCGAACATGAG 59.454 50.000 0.00 0.00 40.80 2.90
4486 5022 2.309528 TATGTGTCCCGAACATGAGC 57.690 50.000 0.00 0.00 40.80 4.26
4487 5023 0.392998 ATGTGTCCCGAACATGAGCC 60.393 55.000 0.00 0.00 40.80 4.70
4488 5024 2.100631 GTGTCCCGAACATGAGCCG 61.101 63.158 0.00 0.00 40.80 5.52
4489 5025 2.264794 GTCCCGAACATGAGCCGT 59.735 61.111 0.00 0.00 0.00 5.68
4490 5026 1.375523 GTCCCGAACATGAGCCGTT 60.376 57.895 0.00 0.00 0.00 4.44
4491 5027 0.108520 GTCCCGAACATGAGCCGTTA 60.109 55.000 0.00 0.00 0.00 3.18
4492 5028 0.174845 TCCCGAACATGAGCCGTTAG 59.825 55.000 0.00 0.00 0.00 2.34
4493 5029 0.108329 CCCGAACATGAGCCGTTAGT 60.108 55.000 0.00 0.00 0.00 2.24
4494 5030 1.674817 CCCGAACATGAGCCGTTAGTT 60.675 52.381 0.00 0.00 0.00 2.24
4495 5031 2.417651 CCCGAACATGAGCCGTTAGTTA 60.418 50.000 0.00 0.00 0.00 2.24
4496 5032 2.601763 CCGAACATGAGCCGTTAGTTAC 59.398 50.000 0.00 0.00 0.00 2.50
4497 5033 2.601763 CGAACATGAGCCGTTAGTTACC 59.398 50.000 0.00 0.00 0.00 2.85
4498 5034 3.592059 GAACATGAGCCGTTAGTTACCA 58.408 45.455 0.00 0.00 0.00 3.25
4499 5035 2.968675 ACATGAGCCGTTAGTTACCAC 58.031 47.619 0.00 0.00 0.00 4.16
4500 5036 2.277084 CATGAGCCGTTAGTTACCACC 58.723 52.381 0.00 0.00 0.00 4.61
4501 5037 1.340088 TGAGCCGTTAGTTACCACCA 58.660 50.000 0.00 0.00 0.00 4.17
4502 5038 1.693062 TGAGCCGTTAGTTACCACCAA 59.307 47.619 0.00 0.00 0.00 3.67
4503 5039 2.303600 TGAGCCGTTAGTTACCACCAAT 59.696 45.455 0.00 0.00 0.00 3.16
4504 5040 3.514706 TGAGCCGTTAGTTACCACCAATA 59.485 43.478 0.00 0.00 0.00 1.90
4505 5041 4.117685 GAGCCGTTAGTTACCACCAATAG 58.882 47.826 0.00 0.00 0.00 1.73
4506 5042 3.516700 AGCCGTTAGTTACCACCAATAGT 59.483 43.478 0.00 0.00 0.00 2.12
4507 5043 3.867493 GCCGTTAGTTACCACCAATAGTC 59.133 47.826 0.00 0.00 0.00 2.59
4508 5044 4.621274 GCCGTTAGTTACCACCAATAGTCA 60.621 45.833 0.00 0.00 0.00 3.41
4509 5045 5.667466 CCGTTAGTTACCACCAATAGTCAT 58.333 41.667 0.00 0.00 0.00 3.06
4510 5046 5.522460 CCGTTAGTTACCACCAATAGTCATG 59.478 44.000 0.00 0.00 0.00 3.07
4511 5047 5.522460 CGTTAGTTACCACCAATAGTCATGG 59.478 44.000 0.00 0.00 43.84 3.66
4525 5061 1.459592 GTCATGGTTTTCAGGACGACG 59.540 52.381 0.00 0.00 45.34 5.12
4526 5062 0.165944 CATGGTTTTCAGGACGACGC 59.834 55.000 0.00 0.00 0.00 5.19
4527 5063 0.953960 ATGGTTTTCAGGACGACGCC 60.954 55.000 0.00 0.00 0.00 5.68
4528 5064 1.301479 GGTTTTCAGGACGACGCCT 60.301 57.895 5.18 5.18 39.37 5.52
4529 5065 1.289800 GGTTTTCAGGACGACGCCTC 61.290 60.000 7.71 0.00 35.66 4.70
4530 5066 1.005394 TTTTCAGGACGACGCCTCC 60.005 57.895 7.71 2.36 35.66 4.30
4531 5067 1.750341 TTTTCAGGACGACGCCTCCA 61.750 55.000 7.71 0.00 35.66 3.86
4532 5068 1.750341 TTTCAGGACGACGCCTCCAA 61.750 55.000 7.71 2.63 35.66 3.53
4533 5069 1.750341 TTCAGGACGACGCCTCCAAA 61.750 55.000 7.71 0.00 35.66 3.28
4534 5070 1.301401 CAGGACGACGCCTCCAAAA 60.301 57.895 7.71 0.00 35.66 2.44
4535 5071 0.882927 CAGGACGACGCCTCCAAAAA 60.883 55.000 7.71 0.00 35.66 1.94
4536 5072 0.602905 AGGACGACGCCTCCAAAAAG 60.603 55.000 7.20 0.00 30.76 2.27
4537 5073 1.574702 GGACGACGCCTCCAAAAAGG 61.575 60.000 0.00 0.00 39.62 3.11
4538 5074 0.883370 GACGACGCCTCCAAAAAGGT 60.883 55.000 0.00 0.00 38.79 3.50
4539 5075 0.393820 ACGACGCCTCCAAAAAGGTA 59.606 50.000 0.00 0.00 38.79 3.08
4540 5076 1.076332 CGACGCCTCCAAAAAGGTAG 58.924 55.000 0.00 0.00 38.79 3.18
4541 5077 1.607251 CGACGCCTCCAAAAAGGTAGT 60.607 52.381 0.00 0.00 38.79 2.73
4542 5078 1.804748 GACGCCTCCAAAAAGGTAGTG 59.195 52.381 0.00 0.00 38.79 2.74
4543 5079 1.418637 ACGCCTCCAAAAAGGTAGTGA 59.581 47.619 0.00 0.00 38.79 3.41
4544 5080 1.804748 CGCCTCCAAAAAGGTAGTGAC 59.195 52.381 0.00 0.00 38.79 3.67
4545 5081 2.808933 CGCCTCCAAAAAGGTAGTGACA 60.809 50.000 0.00 0.00 38.79 3.58
4546 5082 3.421844 GCCTCCAAAAAGGTAGTGACAT 58.578 45.455 0.00 0.00 38.79 3.06
4547 5083 4.585879 GCCTCCAAAAAGGTAGTGACATA 58.414 43.478 0.00 0.00 38.79 2.29
4548 5084 5.007682 GCCTCCAAAAAGGTAGTGACATAA 58.992 41.667 0.00 0.00 38.79 1.90
4549 5085 5.475564 GCCTCCAAAAAGGTAGTGACATAAA 59.524 40.000 0.00 0.00 38.79 1.40
4550 5086 6.152831 GCCTCCAAAAAGGTAGTGACATAAAT 59.847 38.462 0.00 0.00 38.79 1.40
4551 5087 7.538575 CCTCCAAAAAGGTAGTGACATAAATG 58.461 38.462 0.00 0.00 39.02 2.32
4552 5088 7.393234 CCTCCAAAAAGGTAGTGACATAAATGA 59.607 37.037 0.00 0.00 39.02 2.57
4553 5089 8.106247 TCCAAAAAGGTAGTGACATAAATGAC 57.894 34.615 0.00 0.00 39.02 3.06
4554 5090 7.021196 CCAAAAAGGTAGTGACATAAATGACG 58.979 38.462 0.00 0.00 0.00 4.35
4555 5091 5.796350 AAAGGTAGTGACATAAATGACGC 57.204 39.130 0.00 0.00 34.13 5.19
4556 5092 4.737855 AGGTAGTGACATAAATGACGCT 57.262 40.909 11.94 11.94 43.48 5.07
4557 5093 4.433615 AGGTAGTGACATAAATGACGCTG 58.566 43.478 15.50 0.00 41.77 5.18
4558 5094 4.081642 AGGTAGTGACATAAATGACGCTGT 60.082 41.667 15.50 1.91 41.77 4.40
4559 5095 4.267928 GGTAGTGACATAAATGACGCTGTC 59.732 45.833 15.50 9.88 41.77 3.51
4560 5096 4.193826 AGTGACATAAATGACGCTGTCT 57.806 40.909 7.52 0.00 40.63 3.41
4561 5097 5.324784 AGTGACATAAATGACGCTGTCTA 57.675 39.130 7.52 0.00 40.63 2.59
4562 5098 5.720202 AGTGACATAAATGACGCTGTCTAA 58.280 37.500 7.52 0.00 40.63 2.10
4563 5099 6.341316 AGTGACATAAATGACGCTGTCTAAT 58.659 36.000 7.52 0.00 40.63 1.73
4564 5100 6.477033 AGTGACATAAATGACGCTGTCTAATC 59.523 38.462 7.52 1.08 40.63 1.75
4565 5101 6.477033 GTGACATAAATGACGCTGTCTAATCT 59.523 38.462 9.49 0.00 38.98 2.40
4566 5102 7.648112 GTGACATAAATGACGCTGTCTAATCTA 59.352 37.037 9.49 0.00 38.98 1.98
4567 5103 7.862873 TGACATAAATGACGCTGTCTAATCTAG 59.137 37.037 9.49 0.00 38.98 2.43
4568 5104 6.642950 ACATAAATGACGCTGTCTAATCTAGC 59.357 38.462 9.49 0.00 33.15 3.42
4569 5105 4.655762 AATGACGCTGTCTAATCTAGCA 57.344 40.909 9.49 0.00 37.29 3.49
4570 5106 4.655762 ATGACGCTGTCTAATCTAGCAA 57.344 40.909 9.49 0.00 37.29 3.91
4571 5107 4.450082 TGACGCTGTCTAATCTAGCAAA 57.550 40.909 9.49 0.00 37.29 3.68
4572 5108 4.816392 TGACGCTGTCTAATCTAGCAAAA 58.184 39.130 9.49 0.00 37.29 2.44
4573 5109 4.625742 TGACGCTGTCTAATCTAGCAAAAC 59.374 41.667 9.49 0.00 37.29 2.43
4574 5110 3.933332 ACGCTGTCTAATCTAGCAAAACC 59.067 43.478 0.00 0.00 37.29 3.27
4575 5111 3.932710 CGCTGTCTAATCTAGCAAAACCA 59.067 43.478 0.00 0.00 37.29 3.67
4576 5112 4.033358 CGCTGTCTAATCTAGCAAAACCAG 59.967 45.833 0.00 0.00 37.29 4.00
4577 5113 5.178797 GCTGTCTAATCTAGCAAAACCAGA 58.821 41.667 0.00 0.00 37.40 3.86
4578 5114 5.819901 GCTGTCTAATCTAGCAAAACCAGAT 59.180 40.000 0.00 0.00 37.40 2.90
4579 5115 6.018343 GCTGTCTAATCTAGCAAAACCAGATC 60.018 42.308 0.00 0.00 37.40 2.75
4580 5116 6.042777 TGTCTAATCTAGCAAAACCAGATCG 58.957 40.000 0.00 0.00 0.00 3.69
4581 5117 5.463724 GTCTAATCTAGCAAAACCAGATCGG 59.536 44.000 2.55 2.55 42.50 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.771943 ACAAGTGTCACCAAGGAAGAGA 59.228 45.455 0.00 0.00 0.00 3.10
13 14 2.294074 GTGGCTAAACAAGTGTCACCA 58.706 47.619 0.00 0.00 0.00 4.17
32 33 1.942586 GCTAACGTCCACGGGATTTGT 60.943 52.381 3.81 0.00 44.95 2.83
37 38 1.597797 AATCGCTAACGTCCACGGGA 61.598 55.000 3.81 0.00 44.95 5.14
101 103 0.744281 CCGTTTTGTCTTTGCCACCT 59.256 50.000 0.00 0.00 0.00 4.00
161 166 2.440430 TCCGCTTCTCCCTCCGAG 60.440 66.667 0.00 0.00 40.30 4.63
236 261 2.106332 GTGGGGAGCCACGTATCG 59.894 66.667 0.00 0.00 0.00 2.92
324 350 1.813786 GTCTACCAGTCTCACTTCGCT 59.186 52.381 0.00 0.00 0.00 4.93
325 351 1.466024 CGTCTACCAGTCTCACTTCGC 60.466 57.143 0.00 0.00 0.00 4.70
326 352 1.130749 CCGTCTACCAGTCTCACTTCG 59.869 57.143 0.00 0.00 0.00 3.79
327 353 1.473278 CCCGTCTACCAGTCTCACTTC 59.527 57.143 0.00 0.00 0.00 3.01
348 374 2.048127 GGAGTCGTGGACTGGTGC 60.048 66.667 2.51 0.00 43.53 5.01
415 441 2.517402 CGGTCTCCCTCCCTCTCG 60.517 72.222 0.00 0.00 0.00 4.04
590 648 2.586900 GACGAGAAGAAGAGTGGTTCG 58.413 52.381 0.00 0.00 0.00 3.95
596 654 2.352388 CTCTCCGACGAGAAGAAGAGT 58.648 52.381 0.00 0.00 44.62 3.24
641 706 2.380084 TTACCAGTGATCCGTTCAGC 57.620 50.000 0.00 0.00 34.17 4.26
644 709 4.694339 AGCTAATTACCAGTGATCCGTTC 58.306 43.478 0.00 0.00 0.00 3.95
681 746 0.396974 CAGGGGGAGACAGAGAGAGG 60.397 65.000 0.00 0.00 0.00 3.69
764 832 1.679139 GCCATGATTCCGTGATCCAA 58.321 50.000 0.00 0.00 0.00 3.53
815 884 1.850345 GGGGAATGGAATCAGGTGGTA 59.150 52.381 0.00 0.00 0.00 3.25
865 935 0.240945 CTGTTCCATGCCGACAAACC 59.759 55.000 0.00 0.00 0.00 3.27
1023 1100 0.545309 TCCAGTTGAGCCAGTAGCCT 60.545 55.000 0.00 0.00 45.47 4.58
1077 1154 2.196502 TAGCATGCCAGGGCCATG 59.803 61.111 15.66 11.33 41.09 3.66
1089 1166 4.645136 TCGTACTTCCAGATCAAGTAGCAT 59.355 41.667 4.77 0.00 37.08 3.79
1148 1225 3.134792 GCGCCTCCTCTCTGTCGA 61.135 66.667 0.00 0.00 0.00 4.20
1200 1277 2.345244 CACGGCTTCCAGCAGTCT 59.655 61.111 0.00 0.00 46.36 3.24
1236 1313 2.091102 GAAAAGCCAGCAGCCAAGCA 62.091 55.000 2.08 0.00 45.47 3.91
1266 1343 4.768968 AGCACTGAAGCCATAAACAAGAAT 59.231 37.500 0.00 0.00 34.23 2.40
1365 1442 2.338500 CGGAACTTCAGAGGCAGTAAC 58.662 52.381 0.00 0.00 0.00 2.50
1375 1452 3.560068 AGTTGTTGTTAGCGGAACTTCAG 59.440 43.478 6.18 0.00 38.98 3.02
1383 1460 4.749245 ATCTTTCAGTTGTTGTTAGCGG 57.251 40.909 0.00 0.00 0.00 5.52
1750 1827 4.705507 AGCGTACCGATAACATCCATAGAT 59.294 41.667 0.00 0.00 0.00 1.98
1766 1843 0.739813 ATCCGTCTTGCAAGCGTACC 60.740 55.000 28.59 13.14 0.00 3.34
1970 2047 8.632679 TCAGCAGTTAAAACTCAGAAAATCATT 58.367 29.630 0.00 0.00 37.08 2.57
1999 2076 4.759693 TCAATCAATCACAACACACCTACC 59.240 41.667 0.00 0.00 0.00 3.18
2089 2540 8.632679 AGTTCATAATGCTTTCAGTCAAAGAAA 58.367 29.630 0.00 0.00 44.02 2.52
2096 2547 5.634896 CCACAGTTCATAATGCTTTCAGTC 58.365 41.667 0.00 0.00 0.00 3.51
2144 2595 1.496934 CGCAACAAACACCAAATCCC 58.503 50.000 0.00 0.00 0.00 3.85
2451 2908 9.102453 GGGGTCCTATTTAGACTTCTATGTATT 57.898 37.037 0.00 0.00 34.56 1.89
2489 2947 6.782494 TCATATGGACTAGCTCAATAACCAGA 59.218 38.462 2.13 0.00 0.00 3.86
2584 3042 5.268544 CAGCAAAGAATATGTTCACCATCG 58.731 41.667 4.92 0.00 36.79 3.84
2735 3218 6.996879 AGATCAGAAGATTGTGGTATGGATTG 59.003 38.462 0.00 0.00 33.72 2.67
2736 3219 7.146715 AGATCAGAAGATTGTGGTATGGATT 57.853 36.000 0.00 0.00 33.72 3.01
2771 3254 7.938563 AAACGCTGCAATTTTAGATTAAACA 57.061 28.000 0.00 0.00 0.00 2.83
2841 3324 3.865745 GGATAATCCACTGAACACTGACG 59.134 47.826 0.00 0.00 36.28 4.35
2859 3342 5.469760 CCAAATCGACACATTAGCATGGATA 59.530 40.000 0.00 0.00 34.27 2.59
3157 3674 5.791336 ATCTATCAACTGCGGTCAATCTA 57.209 39.130 0.00 0.00 0.00 1.98
3159 3676 5.277538 GGAAATCTATCAACTGCGGTCAATC 60.278 44.000 0.00 0.00 0.00 2.67
3189 3706 5.047377 TCTGGATTGATGTTTAAGGCAAACC 60.047 40.000 0.00 0.00 45.05 3.27
3195 3712 5.256474 ACCAGTCTGGATTGATGTTTAAGG 58.744 41.667 26.18 0.00 40.96 2.69
3200 3717 4.104383 ACAACCAGTCTGGATTGATGTT 57.896 40.909 26.18 4.33 40.96 2.71
3254 3774 8.774546 ACTAGTCTTCTTGATCATCTATCCAA 57.225 34.615 0.00 0.00 33.22 3.53
3257 3777 9.677567 GTTGACTAGTCTTCTTGATCATCTATC 57.322 37.037 23.01 0.00 34.93 2.08
3320 3840 6.093495 CCAGTCGAAATTTATGCAAGAACCTA 59.907 38.462 0.00 0.00 0.00 3.08
3339 3859 3.496884 TCGAAAGGATTTTGAACCAGTCG 59.503 43.478 0.00 0.00 45.09 4.18
3391 3917 8.918202 ACAAGTTCAAACAGTAATGGAGATTA 57.082 30.769 0.00 0.00 0.00 1.75
3423 3949 0.610174 AGATCGCAGTTTGAGGCAGA 59.390 50.000 0.00 0.00 0.00 4.26
3456 3982 0.038166 ACCACCAAGTACCTGCATGG 59.962 55.000 10.13 10.13 42.93 3.66
3509 4035 2.550277 TGATCCTCAGAACTAGGGCA 57.450 50.000 0.00 0.00 34.66 5.36
3518 4044 5.363292 CAGGAGAGATTTCTTGATCCTCAGA 59.637 44.000 6.86 0.00 33.93 3.27
3532 4058 2.273619 ACCAGCTTTCCAGGAGAGATT 58.726 47.619 11.36 0.00 0.00 2.40
3620 4147 4.714308 TGTGGTTTTCAGGACAAGGAAAAT 59.286 37.500 0.00 0.00 42.80 1.82
3624 4151 3.221771 CATGTGGTTTTCAGGACAAGGA 58.778 45.455 0.00 0.00 0.00 3.36
3786 4314 5.067936 TCAAAGAAACTACGCATCCCAAAAA 59.932 36.000 0.00 0.00 0.00 1.94
3802 4330 3.632145 GCCTGGTTCAGACTTCAAAGAAA 59.368 43.478 0.00 0.00 32.44 2.52
3860 4388 1.559219 TGGTGGGGTGTCACATATCAG 59.441 52.381 5.12 0.00 39.27 2.90
3961 4489 2.205342 CCCCACCTTCCCATTCTCTAA 58.795 52.381 0.00 0.00 0.00 2.10
3962 4490 1.628043 CCCCCACCTTCCCATTCTCTA 60.628 57.143 0.00 0.00 0.00 2.43
3984 4512 3.561725 GTCGATAGGCTGCAAAGCTTTAT 59.438 43.478 12.25 0.00 38.04 1.40
3985 4513 2.936498 GTCGATAGGCTGCAAAGCTTTA 59.064 45.455 12.25 0.00 38.04 1.85
4029 4557 2.677836 GCTGACCGATGCTGTTTGATTA 59.322 45.455 0.00 0.00 0.00 1.75
4070 4598 0.464554 TGGATTGTGTCAACGGTGCA 60.465 50.000 0.00 0.00 0.00 4.57
4071 4599 0.665835 TTGGATTGTGTCAACGGTGC 59.334 50.000 0.00 0.00 0.00 5.01
4072 4600 2.287547 CCTTTGGATTGTGTCAACGGTG 60.288 50.000 0.00 0.00 30.58 4.94
4073 4601 1.953686 CCTTTGGATTGTGTCAACGGT 59.046 47.619 0.00 0.00 30.58 4.83
4074 4602 1.335872 GCCTTTGGATTGTGTCAACGG 60.336 52.381 0.00 0.00 35.98 4.44
4075 4603 1.608590 AGCCTTTGGATTGTGTCAACG 59.391 47.619 0.00 0.00 0.00 4.10
4076 4604 2.887152 AGAGCCTTTGGATTGTGTCAAC 59.113 45.455 0.00 0.00 0.00 3.18
4077 4605 2.886523 CAGAGCCTTTGGATTGTGTCAA 59.113 45.455 0.00 0.00 0.00 3.18
4141 4669 1.738099 CCTCGCGTGACCCTTCAAG 60.738 63.158 10.21 0.00 34.59 3.02
4186 4722 1.445582 CCTCGACTACGTTGGTGGC 60.446 63.158 0.00 0.00 40.69 5.01
4187 4723 1.214589 CCCTCGACTACGTTGGTGG 59.785 63.158 0.00 0.00 40.69 4.61
4188 4724 1.214589 CCCCTCGACTACGTTGGTG 59.785 63.158 0.00 0.00 40.69 4.17
4189 4725 2.643232 GCCCCTCGACTACGTTGGT 61.643 63.158 0.00 0.00 40.69 3.67
4190 4726 1.956629 ATGCCCCTCGACTACGTTGG 61.957 60.000 0.00 0.00 40.69 3.77
4191 4727 0.527817 GATGCCCCTCGACTACGTTG 60.528 60.000 0.00 0.00 40.69 4.10
4192 4728 1.814527 GATGCCCCTCGACTACGTT 59.185 57.895 0.00 0.00 40.69 3.99
4193 4729 2.478890 CGATGCCCCTCGACTACGT 61.479 63.158 0.00 0.00 41.12 3.57
4194 4730 2.331805 CGATGCCCCTCGACTACG 59.668 66.667 0.00 0.00 41.12 3.51
4195 4731 2.027751 GCGATGCCCCTCGACTAC 59.972 66.667 4.81 0.00 41.12 2.73
4196 4732 3.224324 GGCGATGCCCCTCGACTA 61.224 66.667 0.00 0.00 43.45 2.59
4206 4742 0.525761 TTTGGTTTGCTAGGCGATGC 59.474 50.000 0.00 0.00 0.00 3.91
4207 4743 1.135402 GGTTTGGTTTGCTAGGCGATG 60.135 52.381 0.00 0.00 0.00 3.84
4208 4744 1.173913 GGTTTGGTTTGCTAGGCGAT 58.826 50.000 0.00 0.00 0.00 4.58
4209 4745 0.179015 TGGTTTGGTTTGCTAGGCGA 60.179 50.000 0.00 0.00 0.00 5.54
4210 4746 0.240945 CTGGTTTGGTTTGCTAGGCG 59.759 55.000 0.00 0.00 0.00 5.52
4211 4747 0.603065 CCTGGTTTGGTTTGCTAGGC 59.397 55.000 0.00 0.00 0.00 3.93
4212 4748 1.886542 GACCTGGTTTGGTTTGCTAGG 59.113 52.381 0.00 0.00 41.00 3.02
4213 4749 2.582052 TGACCTGGTTTGGTTTGCTAG 58.418 47.619 0.00 0.00 41.00 3.42
4214 4750 2.738587 TGACCTGGTTTGGTTTGCTA 57.261 45.000 0.00 0.00 41.00 3.49
4215 4751 2.086610 ATGACCTGGTTTGGTTTGCT 57.913 45.000 0.00 0.00 41.00 3.91
4216 4752 2.482864 CAATGACCTGGTTTGGTTTGC 58.517 47.619 0.00 0.00 41.00 3.68
4217 4753 2.158986 TGCAATGACCTGGTTTGGTTTG 60.159 45.455 12.00 8.05 41.00 2.93
4218 4754 2.114616 TGCAATGACCTGGTTTGGTTT 58.885 42.857 12.00 0.00 41.00 3.27
4219 4755 1.786937 TGCAATGACCTGGTTTGGTT 58.213 45.000 12.00 0.00 41.00 3.67
4220 4756 1.895131 GATGCAATGACCTGGTTTGGT 59.105 47.619 12.00 0.00 44.10 3.67
4221 4757 1.135315 CGATGCAATGACCTGGTTTGG 60.135 52.381 12.00 0.00 0.00 3.28
4222 4758 1.541147 ACGATGCAATGACCTGGTTTG 59.459 47.619 0.00 3.65 0.00 2.93
4223 4759 1.909700 ACGATGCAATGACCTGGTTT 58.090 45.000 0.00 0.00 0.00 3.27
4224 4760 1.541147 CAACGATGCAATGACCTGGTT 59.459 47.619 0.00 0.00 0.00 3.67
4225 4761 1.167851 CAACGATGCAATGACCTGGT 58.832 50.000 0.00 0.00 0.00 4.00
4226 4762 1.452110 TCAACGATGCAATGACCTGG 58.548 50.000 0.00 0.00 0.00 4.45
4227 4763 2.421073 ACATCAACGATGCAATGACCTG 59.579 45.455 3.90 0.00 43.15 4.00
4228 4764 2.715046 ACATCAACGATGCAATGACCT 58.285 42.857 3.90 0.00 43.15 3.85
4229 4765 3.623060 ACTACATCAACGATGCAATGACC 59.377 43.478 3.90 0.00 43.15 4.02
4230 4766 4.548916 CGACTACATCAACGATGCAATGAC 60.549 45.833 3.90 0.00 43.15 3.06
4231 4767 3.551485 CGACTACATCAACGATGCAATGA 59.449 43.478 3.90 0.00 43.15 2.57
4232 4768 3.551485 TCGACTACATCAACGATGCAATG 59.449 43.478 3.90 0.00 43.15 2.82
4233 4769 3.780902 TCGACTACATCAACGATGCAAT 58.219 40.909 3.90 0.00 43.15 3.56
4234 4770 3.224884 TCGACTACATCAACGATGCAA 57.775 42.857 3.90 0.00 43.15 4.08
4235 4771 2.931512 TCGACTACATCAACGATGCA 57.068 45.000 3.90 0.00 43.15 3.96
4236 4772 3.000322 CCTTTCGACTACATCAACGATGC 60.000 47.826 3.90 0.00 43.15 3.91
4237 4773 3.000322 GCCTTTCGACTACATCAACGATG 60.000 47.826 2.45 2.45 44.71 3.84
4238 4774 3.187700 GCCTTTCGACTACATCAACGAT 58.812 45.455 0.00 0.00 34.85 3.73
4239 4775 2.602878 GCCTTTCGACTACATCAACGA 58.397 47.619 0.00 0.00 0.00 3.85
4240 4776 1.320555 CGCCTTTCGACTACATCAACG 59.679 52.381 0.00 0.00 41.67 4.10
4241 4777 2.334838 ACGCCTTTCGACTACATCAAC 58.665 47.619 0.00 0.00 41.67 3.18
4242 4778 2.602878 GACGCCTTTCGACTACATCAA 58.397 47.619 0.00 0.00 41.67 2.57
4243 4779 1.466866 CGACGCCTTTCGACTACATCA 60.467 52.381 0.00 0.00 41.78 3.07
4244 4780 1.189403 CGACGCCTTTCGACTACATC 58.811 55.000 0.00 0.00 41.78 3.06
4245 4781 0.801067 GCGACGCCTTTCGACTACAT 60.801 55.000 9.14 0.00 41.78 2.29
4246 4782 1.443194 GCGACGCCTTTCGACTACA 60.443 57.895 9.14 0.00 41.78 2.74
4247 4783 2.494591 CGCGACGCCTTTCGACTAC 61.495 63.158 15.34 0.00 41.78 2.73
4248 4784 2.202388 CGCGACGCCTTTCGACTA 60.202 61.111 15.34 0.00 41.78 2.59
4259 4795 1.057822 CAGTCTTGAATGCGCGACG 59.942 57.895 12.10 0.00 0.00 5.12
4260 4796 1.225854 GCAGTCTTGAATGCGCGAC 60.226 57.895 12.10 2.40 31.87 5.19
4261 4797 1.667510 TGCAGTCTTGAATGCGCGA 60.668 52.632 12.10 0.00 45.54 5.87
4262 4798 1.510623 GTGCAGTCTTGAATGCGCG 60.511 57.895 18.19 0.00 45.54 6.86
4263 4799 4.447365 GTGCAGTCTTGAATGCGC 57.553 55.556 18.19 18.19 45.54 6.09
4264 4800 1.678360 GTTGTGCAGTCTTGAATGCG 58.322 50.000 16.36 0.00 45.54 4.73
4265 4801 1.678360 CGTTGTGCAGTCTTGAATGC 58.322 50.000 14.95 14.95 42.86 3.56
4266 4802 1.678360 GCGTTGTGCAGTCTTGAATG 58.322 50.000 0.00 0.00 45.45 2.67
4278 4814 3.521308 GAGGTGTTGCGGCGTTGTG 62.521 63.158 9.37 0.00 0.00 3.33
4279 4815 3.276846 GAGGTGTTGCGGCGTTGT 61.277 61.111 9.37 0.00 0.00 3.32
4280 4816 2.616330 ATGAGGTGTTGCGGCGTTG 61.616 57.895 9.37 0.00 0.00 4.10
4281 4817 2.281484 ATGAGGTGTTGCGGCGTT 60.281 55.556 9.37 0.00 0.00 4.84
4282 4818 3.049674 CATGAGGTGTTGCGGCGT 61.050 61.111 9.37 0.00 0.00 5.68
4283 4819 3.049674 ACATGAGGTGTTGCGGCG 61.050 61.111 0.51 0.51 38.01 6.46
4284 4820 2.562912 CACATGAGGTGTTGCGGC 59.437 61.111 0.00 0.00 42.75 6.53
4292 4828 2.334977 TGTACCCTTGACACATGAGGT 58.665 47.619 0.00 0.00 0.00 3.85
4293 4829 3.634397 ATGTACCCTTGACACATGAGG 57.366 47.619 0.00 0.00 31.83 3.86
4294 4830 3.618594 CGAATGTACCCTTGACACATGAG 59.381 47.826 0.00 0.00 33.31 2.90
4295 4831 3.595173 CGAATGTACCCTTGACACATGA 58.405 45.455 0.00 0.00 33.31 3.07
4296 4832 2.677836 CCGAATGTACCCTTGACACATG 59.322 50.000 0.00 0.00 33.31 3.21
4297 4833 2.304761 ACCGAATGTACCCTTGACACAT 59.695 45.455 0.00 0.00 34.42 3.21
4298 4834 1.695242 ACCGAATGTACCCTTGACACA 59.305 47.619 0.00 0.00 0.00 3.72
4299 4835 2.344025 GACCGAATGTACCCTTGACAC 58.656 52.381 0.00 0.00 0.00 3.67
4300 4836 1.067425 CGACCGAATGTACCCTTGACA 60.067 52.381 0.00 0.00 0.00 3.58
4301 4837 1.203052 TCGACCGAATGTACCCTTGAC 59.797 52.381 0.00 0.00 0.00 3.18
4302 4838 1.548081 TCGACCGAATGTACCCTTGA 58.452 50.000 0.00 0.00 0.00 3.02
4303 4839 2.373540 TTCGACCGAATGTACCCTTG 57.626 50.000 0.18 0.00 0.00 3.61
4304 4840 2.354403 CCTTTCGACCGAATGTACCCTT 60.354 50.000 5.65 0.00 33.79 3.95
4305 4841 1.206371 CCTTTCGACCGAATGTACCCT 59.794 52.381 5.65 0.00 33.79 4.34
4306 4842 1.648504 CCTTTCGACCGAATGTACCC 58.351 55.000 5.65 0.00 33.79 3.69
4307 4843 1.004595 GCCTTTCGACCGAATGTACC 58.995 55.000 5.65 0.00 33.79 3.34
4308 4844 0.643820 CGCCTTTCGACCGAATGTAC 59.356 55.000 5.65 2.88 41.67 2.90
4309 4845 0.244450 ACGCCTTTCGACCGAATGTA 59.756 50.000 5.65 0.00 41.67 2.29
4310 4846 1.005394 ACGCCTTTCGACCGAATGT 60.005 52.632 5.65 0.85 41.67 2.71
4311 4847 1.708027 GACGCCTTTCGACCGAATG 59.292 57.895 5.65 8.16 41.67 2.67
4312 4848 1.804326 CGACGCCTTTCGACCGAAT 60.804 57.895 5.65 0.00 41.78 3.34
4313 4849 2.429571 CGACGCCTTTCGACCGAA 60.430 61.111 0.18 0.18 41.78 4.30
4326 4862 1.057822 CAGTCTTGAATGCGCGACG 59.942 57.895 12.10 0.00 0.00 5.12
4327 4863 1.225854 GCAGTCTTGAATGCGCGAC 60.226 57.895 12.10 2.40 31.87 5.19
4328 4864 1.667510 TGCAGTCTTGAATGCGCGA 60.668 52.632 12.10 0.00 45.54 5.87
4329 4865 1.510623 GTGCAGTCTTGAATGCGCG 60.511 57.895 18.19 0.00 45.54 6.86
4330 4866 4.447365 GTGCAGTCTTGAATGCGC 57.553 55.556 18.19 18.19 45.54 6.09
4331 4867 1.678360 GTTGTGCAGTCTTGAATGCG 58.322 50.000 16.36 0.00 45.54 4.73
4332 4868 1.678360 CGTTGTGCAGTCTTGAATGC 58.322 50.000 14.95 14.95 42.86 3.56
4333 4869 1.678360 GCGTTGTGCAGTCTTGAATG 58.322 50.000 0.00 0.00 45.45 2.67
4345 4881 3.521308 GAGGTGTTGCGGCGTTGTG 62.521 63.158 9.37 0.00 0.00 3.33
4346 4882 3.276846 GAGGTGTTGCGGCGTTGT 61.277 61.111 9.37 0.00 0.00 3.32
4347 4883 2.616330 ATGAGGTGTTGCGGCGTTG 61.616 57.895 9.37 0.00 0.00 4.10
4348 4884 2.281484 ATGAGGTGTTGCGGCGTT 60.281 55.556 9.37 0.00 0.00 4.84
4349 4885 3.049674 CATGAGGTGTTGCGGCGT 61.050 61.111 9.37 0.00 0.00 5.68
4350 4886 3.049674 ACATGAGGTGTTGCGGCG 61.050 61.111 0.51 0.51 38.01 6.46
4351 4887 2.562912 CACATGAGGTGTTGCGGC 59.437 61.111 0.00 0.00 42.75 6.53
4359 4895 2.334977 TGTACCCTTGACACATGAGGT 58.665 47.619 0.00 0.00 0.00 3.85
4360 4896 3.634397 ATGTACCCTTGACACATGAGG 57.366 47.619 0.00 0.00 31.83 3.86
4361 4897 3.618594 CGAATGTACCCTTGACACATGAG 59.381 47.826 0.00 0.00 33.31 2.90
4362 4898 3.259625 TCGAATGTACCCTTGACACATGA 59.740 43.478 0.00 0.00 33.31 3.07
4363 4899 3.595173 TCGAATGTACCCTTGACACATG 58.405 45.455 0.00 0.00 33.31 3.21
4364 4900 3.973206 TCGAATGTACCCTTGACACAT 57.027 42.857 0.00 0.00 34.42 3.21
4365 4901 3.755112 TTCGAATGTACCCTTGACACA 57.245 42.857 0.00 0.00 0.00 3.72
4366 4902 3.435671 CCTTTCGAATGTACCCTTGACAC 59.564 47.826 0.00 0.00 0.00 3.67
4367 4903 3.558321 CCCTTTCGAATGTACCCTTGACA 60.558 47.826 0.00 0.00 0.00 3.58
4368 4904 3.007635 CCCTTTCGAATGTACCCTTGAC 58.992 50.000 0.00 0.00 0.00 3.18
4369 4905 2.617021 GCCCTTTCGAATGTACCCTTGA 60.617 50.000 0.00 0.00 0.00 3.02
4370 4906 1.743394 GCCCTTTCGAATGTACCCTTG 59.257 52.381 0.00 0.00 0.00 3.61
4371 4907 1.353022 TGCCCTTTCGAATGTACCCTT 59.647 47.619 0.00 0.00 0.00 3.95
4372 4908 0.988832 TGCCCTTTCGAATGTACCCT 59.011 50.000 0.00 0.00 0.00 4.34
4373 4909 1.092348 GTGCCCTTTCGAATGTACCC 58.908 55.000 0.00 0.00 0.00 3.69
4374 4910 1.467342 GTGTGCCCTTTCGAATGTACC 59.533 52.381 0.00 0.00 0.00 3.34
4375 4911 2.147958 TGTGTGCCCTTTCGAATGTAC 58.852 47.619 0.00 1.51 0.00 2.90
4376 4912 2.552599 TGTGTGCCCTTTCGAATGTA 57.447 45.000 0.00 0.00 0.00 2.29
4377 4913 1.608590 CTTGTGTGCCCTTTCGAATGT 59.391 47.619 0.00 0.00 0.00 2.71
4378 4914 1.879380 TCTTGTGTGCCCTTTCGAATG 59.121 47.619 0.00 0.45 0.00 2.67
4379 4915 1.880027 GTCTTGTGTGCCCTTTCGAAT 59.120 47.619 0.00 0.00 0.00 3.34
4380 4916 1.305201 GTCTTGTGTGCCCTTTCGAA 58.695 50.000 0.00 0.00 0.00 3.71
4381 4917 0.179234 TGTCTTGTGTGCCCTTTCGA 59.821 50.000 0.00 0.00 0.00 3.71
4382 4918 1.021202 TTGTCTTGTGTGCCCTTTCG 58.979 50.000 0.00 0.00 0.00 3.46
4383 4919 1.748493 TGTTGTCTTGTGTGCCCTTTC 59.252 47.619 0.00 0.00 0.00 2.62
4384 4920 1.476488 GTGTTGTCTTGTGTGCCCTTT 59.524 47.619 0.00 0.00 0.00 3.11
4385 4921 1.102978 GTGTTGTCTTGTGTGCCCTT 58.897 50.000 0.00 0.00 0.00 3.95
4386 4922 0.751643 GGTGTTGTCTTGTGTGCCCT 60.752 55.000 0.00 0.00 0.00 5.19
4387 4923 0.751643 AGGTGTTGTCTTGTGTGCCC 60.752 55.000 0.00 0.00 0.00 5.36
4388 4924 0.663153 GAGGTGTTGTCTTGTGTGCC 59.337 55.000 0.00 0.00 0.00 5.01
4389 4925 1.378531 TGAGGTGTTGTCTTGTGTGC 58.621 50.000 0.00 0.00 0.00 4.57
4390 4926 2.945008 ACATGAGGTGTTGTCTTGTGTG 59.055 45.455 0.00 0.00 38.01 3.82
4391 4927 2.945008 CACATGAGGTGTTGTCTTGTGT 59.055 45.455 0.00 0.00 41.64 3.72
4392 4928 3.614159 CACATGAGGTGTTGTCTTGTG 57.386 47.619 0.00 5.14 42.75 3.33
4403 4939 2.334977 TGTACCCTTGACACATGAGGT 58.665 47.619 0.00 0.00 0.00 3.85
4404 4940 3.634397 ATGTACCCTTGACACATGAGG 57.366 47.619 0.00 0.00 31.83 3.86
4405 4941 3.618594 CGAATGTACCCTTGACACATGAG 59.381 47.826 0.00 0.00 33.31 2.90
4406 4942 3.259625 TCGAATGTACCCTTGACACATGA 59.740 43.478 0.00 0.00 33.31 3.07
4407 4943 3.595173 TCGAATGTACCCTTGACACATG 58.405 45.455 0.00 0.00 33.31 3.21
4408 4944 3.973206 TCGAATGTACCCTTGACACAT 57.027 42.857 0.00 0.00 34.42 3.21
4409 4945 3.755112 TTCGAATGTACCCTTGACACA 57.245 42.857 0.00 0.00 0.00 3.72
4410 4946 3.435671 CCTTTCGAATGTACCCTTGACAC 59.564 47.826 0.00 0.00 0.00 3.67
4411 4947 3.558321 CCCTTTCGAATGTACCCTTGACA 60.558 47.826 0.00 0.00 0.00 3.58
4412 4948 3.007635 CCCTTTCGAATGTACCCTTGAC 58.992 50.000 0.00 0.00 0.00 3.18
4413 4949 2.617021 GCCCTTTCGAATGTACCCTTGA 60.617 50.000 0.00 0.00 0.00 3.02
4414 4950 1.743394 GCCCTTTCGAATGTACCCTTG 59.257 52.381 0.00 0.00 0.00 3.61
4415 4951 1.353022 TGCCCTTTCGAATGTACCCTT 59.647 47.619 0.00 0.00 0.00 3.95
4416 4952 0.988832 TGCCCTTTCGAATGTACCCT 59.011 50.000 0.00 0.00 0.00 4.34
4417 4953 1.379527 CTGCCCTTTCGAATGTACCC 58.620 55.000 0.00 0.00 0.00 3.69
4418 4954 1.379527 CCTGCCCTTTCGAATGTACC 58.620 55.000 0.00 0.00 0.00 3.34
4419 4955 1.379527 CCCTGCCCTTTCGAATGTAC 58.620 55.000 0.00 0.00 0.00 2.90
4420 4956 0.393808 GCCCTGCCCTTTCGAATGTA 60.394 55.000 0.00 0.00 0.00 2.29
4421 4957 1.678970 GCCCTGCCCTTTCGAATGT 60.679 57.895 0.00 0.00 0.00 2.71
4422 4958 1.678635 TGCCCTGCCCTTTCGAATG 60.679 57.895 0.00 0.45 0.00 2.67
4423 4959 1.678970 GTGCCCTGCCCTTTCGAAT 60.679 57.895 0.00 0.00 0.00 3.34
4424 4960 2.282180 GTGCCCTGCCCTTTCGAA 60.282 61.111 0.00 0.00 0.00 3.71
4425 4961 3.565214 TGTGCCCTGCCCTTTCGA 61.565 61.111 0.00 0.00 0.00 3.71
4426 4962 3.365265 GTGTGCCCTGCCCTTTCG 61.365 66.667 0.00 0.00 0.00 3.46
4427 4963 1.809567 CTTGTGTGCCCTGCCCTTTC 61.810 60.000 0.00 0.00 0.00 2.62
4428 4964 1.833934 CTTGTGTGCCCTGCCCTTT 60.834 57.895 0.00 0.00 0.00 3.11
4429 4965 2.203538 CTTGTGTGCCCTGCCCTT 60.204 61.111 0.00 0.00 0.00 3.95
4430 4966 4.290622 CCTTGTGTGCCCTGCCCT 62.291 66.667 0.00 0.00 0.00 5.19
4431 4967 4.603535 ACCTTGTGTGCCCTGCCC 62.604 66.667 0.00 0.00 0.00 5.36
4432 4968 2.521708 AACCTTGTGTGCCCTGCC 60.522 61.111 0.00 0.00 0.00 4.85
4433 4969 1.799258 CTCAACCTTGTGTGCCCTGC 61.799 60.000 0.00 0.00 0.00 4.85
4434 4970 0.179020 TCTCAACCTTGTGTGCCCTG 60.179 55.000 0.00 0.00 0.00 4.45
4435 4971 0.179018 GTCTCAACCTTGTGTGCCCT 60.179 55.000 0.00 0.00 0.00 5.19
4436 4972 1.507141 CGTCTCAACCTTGTGTGCCC 61.507 60.000 0.00 0.00 0.00 5.36
4437 4973 0.531974 TCGTCTCAACCTTGTGTGCC 60.532 55.000 0.00 0.00 0.00 5.01
4438 4974 1.261619 CTTCGTCTCAACCTTGTGTGC 59.738 52.381 0.00 0.00 0.00 4.57
4439 4975 1.261619 GCTTCGTCTCAACCTTGTGTG 59.738 52.381 0.00 0.00 0.00 3.82
4440 4976 1.583054 GCTTCGTCTCAACCTTGTGT 58.417 50.000 0.00 0.00 0.00 3.72
4441 4977 0.868406 GGCTTCGTCTCAACCTTGTG 59.132 55.000 0.00 0.00 0.00 3.33
4442 4978 0.468226 TGGCTTCGTCTCAACCTTGT 59.532 50.000 0.00 0.00 0.00 3.16
4443 4979 1.466167 CATGGCTTCGTCTCAACCTTG 59.534 52.381 0.00 0.00 0.00 3.61
4444 4980 1.611673 CCATGGCTTCGTCTCAACCTT 60.612 52.381 0.00 0.00 0.00 3.50
4445 4981 0.036010 CCATGGCTTCGTCTCAACCT 60.036 55.000 0.00 0.00 0.00 3.50
4446 4982 1.648467 GCCATGGCTTCGTCTCAACC 61.648 60.000 29.98 0.00 38.26 3.77
4447 4983 0.955428 TGCCATGGCTTCGTCTCAAC 60.955 55.000 35.53 4.44 42.51 3.18
4448 4984 0.035152 ATGCCATGGCTTCGTCTCAA 60.035 50.000 35.53 14.13 42.51 3.02
4449 4985 0.829990 TATGCCATGGCTTCGTCTCA 59.170 50.000 35.53 14.91 42.51 3.27
4450 4986 1.802960 CATATGCCATGGCTTCGTCTC 59.197 52.381 35.53 6.53 42.51 3.36
4451 4987 1.141657 ACATATGCCATGGCTTCGTCT 59.858 47.619 35.53 16.00 42.51 4.18
4452 4988 1.265095 CACATATGCCATGGCTTCGTC 59.735 52.381 35.53 8.10 42.51 4.20
4453 4989 1.311859 CACATATGCCATGGCTTCGT 58.688 50.000 35.53 25.21 42.51 3.85
4454 4990 1.265095 GACACATATGCCATGGCTTCG 59.735 52.381 35.53 24.61 42.51 3.79
4455 4991 1.610522 GGACACATATGCCATGGCTTC 59.389 52.381 35.53 18.93 42.51 3.86
4456 4992 1.696063 GGACACATATGCCATGGCTT 58.304 50.000 35.53 30.83 42.51 4.35
4457 4993 0.178981 GGGACACATATGCCATGGCT 60.179 55.000 35.53 23.20 42.51 4.75
4458 4994 1.518056 CGGGACACATATGCCATGGC 61.518 60.000 30.54 30.54 42.35 4.40
4459 4995 0.108396 TCGGGACACATATGCCATGG 59.892 55.000 7.63 7.63 0.00 3.66
4460 4996 1.603802 GTTCGGGACACATATGCCATG 59.396 52.381 1.58 0.00 0.00 3.66
4461 4997 1.211703 TGTTCGGGACACATATGCCAT 59.788 47.619 1.58 0.00 32.00 4.40
4462 4998 0.615850 TGTTCGGGACACATATGCCA 59.384 50.000 1.58 0.00 32.00 4.92
4463 4999 1.603802 CATGTTCGGGACACATATGCC 59.396 52.381 1.58 0.00 42.04 4.40
4464 5000 2.545526 CTCATGTTCGGGACACATATGC 59.454 50.000 1.58 0.00 42.04 3.14
4465 5001 2.545526 GCTCATGTTCGGGACACATATG 59.454 50.000 0.00 0.00 42.04 1.78
4466 5002 2.485479 GGCTCATGTTCGGGACACATAT 60.485 50.000 0.00 0.00 42.04 1.78
4467 5003 1.134521 GGCTCATGTTCGGGACACATA 60.135 52.381 0.00 0.00 42.04 2.29
4468 5004 0.392998 GGCTCATGTTCGGGACACAT 60.393 55.000 0.00 0.00 42.04 3.21
4469 5005 1.003839 GGCTCATGTTCGGGACACA 60.004 57.895 0.00 0.00 42.04 3.72
4470 5006 2.100631 CGGCTCATGTTCGGGACAC 61.101 63.158 0.00 0.00 42.04 3.67
4471 5007 2.107041 AACGGCTCATGTTCGGGACA 62.107 55.000 0.00 0.00 43.71 4.02
4472 5008 0.108520 TAACGGCTCATGTTCGGGAC 60.109 55.000 0.00 0.00 0.00 4.46
4473 5009 0.174845 CTAACGGCTCATGTTCGGGA 59.825 55.000 0.00 0.00 0.00 5.14
4474 5010 0.108329 ACTAACGGCTCATGTTCGGG 60.108 55.000 0.00 0.00 0.00 5.14
4475 5011 1.722011 AACTAACGGCTCATGTTCGG 58.278 50.000 0.00 0.00 0.00 4.30
4476 5012 2.601763 GGTAACTAACGGCTCATGTTCG 59.398 50.000 0.00 0.00 0.00 3.95
4477 5013 3.370061 GTGGTAACTAACGGCTCATGTTC 59.630 47.826 0.00 0.00 37.61 3.18
4478 5014 3.332034 GTGGTAACTAACGGCTCATGTT 58.668 45.455 0.00 0.00 37.61 2.71
4479 5015 2.354403 GGTGGTAACTAACGGCTCATGT 60.354 50.000 0.00 0.00 37.61 3.21
4480 5016 2.277084 GGTGGTAACTAACGGCTCATG 58.723 52.381 0.00 0.00 37.61 3.07
4481 5017 1.903860 TGGTGGTAACTAACGGCTCAT 59.096 47.619 0.00 0.00 37.61 2.90
4482 5018 1.340088 TGGTGGTAACTAACGGCTCA 58.660 50.000 0.00 0.00 37.61 4.26
4483 5019 2.460757 TTGGTGGTAACTAACGGCTC 57.539 50.000 0.00 0.00 37.61 4.70
4484 5020 3.516700 ACTATTGGTGGTAACTAACGGCT 59.483 43.478 0.00 0.00 37.61 5.52
4485 5021 3.865446 ACTATTGGTGGTAACTAACGGC 58.135 45.455 0.00 0.00 37.61 5.68
4486 5022 5.075858 TGACTATTGGTGGTAACTAACGG 57.924 43.478 0.00 0.00 37.61 4.44
4487 5023 5.522460 CCATGACTATTGGTGGTAACTAACG 59.478 44.000 0.00 0.00 37.61 3.18
4488 5024 6.412214 ACCATGACTATTGGTGGTAACTAAC 58.588 40.000 0.00 0.00 45.71 2.34
4489 5025 6.630203 ACCATGACTATTGGTGGTAACTAA 57.370 37.500 0.00 0.00 45.71 2.24
4490 5026 6.630203 AACCATGACTATTGGTGGTAACTA 57.370 37.500 0.00 0.00 46.75 2.24
4491 5027 5.514500 AACCATGACTATTGGTGGTAACT 57.486 39.130 0.00 0.00 46.75 2.24
4492 5028 6.207810 TGAAAACCATGACTATTGGTGGTAAC 59.792 38.462 0.00 0.00 46.75 2.50
4493 5029 6.307776 TGAAAACCATGACTATTGGTGGTAA 58.692 36.000 0.00 0.00 46.75 2.85
4494 5030 5.882040 TGAAAACCATGACTATTGGTGGTA 58.118 37.500 0.00 0.00 46.75 3.25
4495 5031 4.735369 TGAAAACCATGACTATTGGTGGT 58.265 39.130 0.00 0.00 46.75 4.16
4496 5032 4.158394 CCTGAAAACCATGACTATTGGTGG 59.842 45.833 0.00 0.00 46.75 4.61
4497 5033 5.009631 TCCTGAAAACCATGACTATTGGTG 58.990 41.667 0.00 0.00 46.75 4.17
4499 5035 4.094887 CGTCCTGAAAACCATGACTATTGG 59.905 45.833 0.00 0.00 37.99 3.16
4500 5036 4.935205 TCGTCCTGAAAACCATGACTATTG 59.065 41.667 0.00 0.00 37.99 1.90
4501 5037 4.935808 GTCGTCCTGAAAACCATGACTATT 59.064 41.667 0.00 0.00 37.99 1.73
4502 5038 4.504858 GTCGTCCTGAAAACCATGACTAT 58.495 43.478 0.00 0.00 37.99 2.12
4503 5039 3.613193 CGTCGTCCTGAAAACCATGACTA 60.613 47.826 0.00 0.00 37.99 2.59
4504 5040 2.767505 GTCGTCCTGAAAACCATGACT 58.232 47.619 0.00 0.00 37.99 3.41
4505 5041 1.459592 CGTCGTCCTGAAAACCATGAC 59.540 52.381 0.00 0.00 37.16 3.06
4506 5042 1.790755 CGTCGTCCTGAAAACCATGA 58.209 50.000 0.00 0.00 0.00 3.07
4507 5043 0.165944 GCGTCGTCCTGAAAACCATG 59.834 55.000 0.00 0.00 0.00 3.66
4508 5044 0.953960 GGCGTCGTCCTGAAAACCAT 60.954 55.000 0.00 0.00 0.00 3.55
4509 5045 1.595929 GGCGTCGTCCTGAAAACCA 60.596 57.895 0.00 0.00 0.00 3.67
4510 5046 1.289800 GAGGCGTCGTCCTGAAAACC 61.290 60.000 12.11 0.00 36.38 3.27
4511 5047 1.289800 GGAGGCGTCGTCCTGAAAAC 61.290 60.000 12.11 0.00 36.38 2.43
4512 5048 1.005394 GGAGGCGTCGTCCTGAAAA 60.005 57.895 12.11 0.00 36.38 2.29
4513 5049 1.750341 TTGGAGGCGTCGTCCTGAAA 61.750 55.000 12.11 4.82 38.97 2.69
4514 5050 1.750341 TTTGGAGGCGTCGTCCTGAA 61.750 55.000 12.11 10.08 38.97 3.02
4515 5051 1.750341 TTTTGGAGGCGTCGTCCTGA 61.750 55.000 12.11 5.94 38.97 3.86
4516 5052 0.882927 TTTTTGGAGGCGTCGTCCTG 60.883 55.000 12.11 0.00 38.97 3.86
4517 5053 0.602905 CTTTTTGGAGGCGTCGTCCT 60.603 55.000 15.97 7.78 38.97 3.85
4518 5054 1.574702 CCTTTTTGGAGGCGTCGTCC 61.575 60.000 10.42 10.42 38.71 4.79
4519 5055 0.883370 ACCTTTTTGGAGGCGTCGTC 60.883 55.000 0.00 0.00 40.65 4.20
4520 5056 0.393820 TACCTTTTTGGAGGCGTCGT 59.606 50.000 0.00 0.00 40.65 4.34
4521 5057 1.076332 CTACCTTTTTGGAGGCGTCG 58.924 55.000 0.00 0.00 40.65 5.12
4522 5058 1.804748 CACTACCTTTTTGGAGGCGTC 59.195 52.381 0.00 0.00 40.65 5.19
4523 5059 1.418637 TCACTACCTTTTTGGAGGCGT 59.581 47.619 0.00 0.00 40.65 5.68
4524 5060 1.804748 GTCACTACCTTTTTGGAGGCG 59.195 52.381 0.00 0.00 40.65 5.52
4525 5061 2.858745 TGTCACTACCTTTTTGGAGGC 58.141 47.619 0.00 0.00 40.65 4.70
4526 5062 7.393234 TCATTTATGTCACTACCTTTTTGGAGG 59.607 37.037 0.00 0.00 42.75 4.30
4527 5063 8.237267 GTCATTTATGTCACTACCTTTTTGGAG 58.763 37.037 0.00 0.00 39.71 3.86
4528 5064 7.094975 CGTCATTTATGTCACTACCTTTTTGGA 60.095 37.037 0.00 0.00 39.71 3.53
4529 5065 7.021196 CGTCATTTATGTCACTACCTTTTTGG 58.979 38.462 0.00 0.00 42.93 3.28
4530 5066 6.523201 GCGTCATTTATGTCACTACCTTTTTG 59.477 38.462 0.00 0.00 0.00 2.44
4531 5067 6.430000 AGCGTCATTTATGTCACTACCTTTTT 59.570 34.615 0.00 0.00 0.00 1.94
4532 5068 5.938125 AGCGTCATTTATGTCACTACCTTTT 59.062 36.000 0.00 0.00 0.00 2.27
4533 5069 5.351465 CAGCGTCATTTATGTCACTACCTTT 59.649 40.000 0.00 0.00 0.00 3.11
4534 5070 4.870426 CAGCGTCATTTATGTCACTACCTT 59.130 41.667 0.00 0.00 0.00 3.50
4535 5071 4.081642 ACAGCGTCATTTATGTCACTACCT 60.082 41.667 0.00 0.00 0.00 3.08
4536 5072 4.181578 ACAGCGTCATTTATGTCACTACC 58.818 43.478 0.00 0.00 0.00 3.18
4537 5073 5.103000 AGACAGCGTCATTTATGTCACTAC 58.897 41.667 10.52 0.00 43.55 2.73
4538 5074 5.324784 AGACAGCGTCATTTATGTCACTA 57.675 39.130 10.52 0.00 43.55 2.74
4539 5075 4.193826 AGACAGCGTCATTTATGTCACT 57.806 40.909 10.52 0.00 43.55 3.41
4540 5076 6.477033 AGATTAGACAGCGTCATTTATGTCAC 59.523 38.462 10.52 0.00 43.55 3.67
4541 5077 6.573434 AGATTAGACAGCGTCATTTATGTCA 58.427 36.000 10.52 0.00 43.55 3.58
4542 5078 7.148885 GCTAGATTAGACAGCGTCATTTATGTC 60.149 40.741 10.52 1.55 41.86 3.06
4543 5079 6.642950 GCTAGATTAGACAGCGTCATTTATGT 59.357 38.462 10.52 0.00 34.60 2.29
4544 5080 6.642540 TGCTAGATTAGACAGCGTCATTTATG 59.357 38.462 10.52 0.00 38.15 1.90
4545 5081 6.749139 TGCTAGATTAGACAGCGTCATTTAT 58.251 36.000 10.52 0.25 38.15 1.40
4546 5082 6.144078 TGCTAGATTAGACAGCGTCATTTA 57.856 37.500 10.52 0.00 38.15 1.40
4547 5083 5.011090 TGCTAGATTAGACAGCGTCATTT 57.989 39.130 10.52 0.00 38.15 2.32
4548 5084 4.655762 TGCTAGATTAGACAGCGTCATT 57.344 40.909 10.52 0.00 38.15 2.57
4549 5085 4.655762 TTGCTAGATTAGACAGCGTCAT 57.344 40.909 10.52 0.00 38.15 3.06
4550 5086 4.450082 TTTGCTAGATTAGACAGCGTCA 57.550 40.909 10.52 0.00 38.15 4.35
4551 5087 4.033014 GGTTTTGCTAGATTAGACAGCGTC 59.967 45.833 0.00 1.15 38.15 5.19
4552 5088 3.933332 GGTTTTGCTAGATTAGACAGCGT 59.067 43.478 0.00 0.00 38.15 5.07
4553 5089 3.932710 TGGTTTTGCTAGATTAGACAGCG 59.067 43.478 0.00 0.00 38.15 5.18
4554 5090 5.178797 TCTGGTTTTGCTAGATTAGACAGC 58.821 41.667 0.00 0.00 35.82 4.40
4555 5091 6.199908 CGATCTGGTTTTGCTAGATTAGACAG 59.800 42.308 0.00 0.00 44.09 3.51
4556 5092 6.042777 CGATCTGGTTTTGCTAGATTAGACA 58.957 40.000 0.00 0.00 44.09 3.41
4557 5093 5.463724 CCGATCTGGTTTTGCTAGATTAGAC 59.536 44.000 0.00 0.00 44.09 2.59
4558 5094 5.601662 CCGATCTGGTTTTGCTAGATTAGA 58.398 41.667 0.00 0.00 44.09 2.10
4559 5095 5.914085 CCGATCTGGTTTTGCTAGATTAG 57.086 43.478 0.00 0.00 44.09 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.