Multiple sequence alignment - TraesCS3D01G089100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G089100 chr3D 100.000 4902 0 0 1 4902 45099038 45094137 0.000000e+00 9053.0
1 TraesCS3D01G089100 chr3D 87.147 389 43 5 2032 2417 509686371 509686755 7.540000e-118 435.0
2 TraesCS3D01G089100 chr3D 86.889 389 44 6 2032 2418 599010729 599010346 3.510000e-116 429.0
3 TraesCS3D01G089100 chr3B 92.761 1934 91 26 2428 4331 70852135 70850221 0.000000e+00 2750.0
4 TraesCS3D01G089100 chr3B 88.511 1471 88 35 108 1537 70854239 70852809 0.000000e+00 1705.0
5 TraesCS3D01G089100 chr3B 90.909 693 48 8 2709 3400 70603501 70602823 0.000000e+00 917.0
6 TraesCS3D01G089100 chr3B 93.554 574 35 1 4331 4902 774807952 774808525 0.000000e+00 854.0
7 TraesCS3D01G089100 chr3B 94.030 469 26 1 1564 2032 70852595 70852129 0.000000e+00 710.0
8 TraesCS3D01G089100 chr3B 90.476 105 10 0 1 105 70854395 70854291 6.620000e-29 139.0
9 TraesCS3D01G089100 chr4D 93.414 577 35 2 4328 4902 418353544 418354119 0.000000e+00 852.0
10 TraesCS3D01G089100 chr5B 93.043 575 39 1 4329 4902 246949668 246950242 0.000000e+00 839.0
11 TraesCS3D01G089100 chr5B 92.496 573 41 1 4332 4902 58842543 58841971 0.000000e+00 819.0
12 TraesCS3D01G089100 chr5B 100.000 30 0 0 3363 3392 40981685 40981714 6.850000e-04 56.5
13 TraesCS3D01G089100 chr7B 93.043 575 37 2 4331 4902 94755324 94755898 0.000000e+00 837.0
14 TraesCS3D01G089100 chr6B 92.491 586 41 2 4319 4902 176251793 176252377 0.000000e+00 835.0
15 TraesCS3D01G089100 chr7A 92.721 577 39 2 4329 4902 472629719 472629143 0.000000e+00 830.0
16 TraesCS3D01G089100 chr1A 92.708 576 40 1 4329 4902 53856746 53857321 0.000000e+00 830.0
17 TraesCS3D01G089100 chr1A 87.468 391 42 7 2032 2418 146949973 146950360 1.250000e-120 444.0
18 TraesCS3D01G089100 chr1A 94.444 54 3 0 2831 2884 90109203 90109256 3.140000e-12 84.2
19 TraesCS3D01G089100 chr2B 92.388 578 41 2 4328 4902 765479603 765479026 0.000000e+00 821.0
20 TraesCS3D01G089100 chr2B 85.222 406 51 8 2016 2417 118619404 118619004 4.570000e-110 409.0
21 TraesCS3D01G089100 chrUn 86.480 392 44 7 2032 2418 71622442 71622055 5.870000e-114 422.0
22 TraesCS3D01G089100 chr6D 86.260 393 44 8 2030 2418 141931908 141931522 7.590000e-113 418.0
23 TraesCS3D01G089100 chr5D 85.823 395 45 9 2030 2418 27622220 27621831 4.570000e-110 409.0
24 TraesCS3D01G089100 chr6A 85.787 394 44 10 2032 2418 566444718 566444330 1.640000e-109 407.0
25 TraesCS3D01G089100 chr2D 85.823 395 41 12 2026 2413 522499646 522499260 5.910000e-109 405.0
26 TraesCS3D01G089100 chr3A 85.623 313 28 9 4035 4331 57031277 57030966 3.680000e-81 313.0
27 TraesCS3D01G089100 chr1D 78.704 324 51 10 1695 2012 92961726 92961415 2.990000e-47 200.0
28 TraesCS3D01G089100 chr1D 92.424 66 4 1 2819 2884 92960634 92960570 5.220000e-15 93.5
29 TraesCS3D01G089100 chr1B 92.424 66 4 1 2819 2884 148130011 148129947 5.220000e-15 93.5
30 TraesCS3D01G089100 chr5A 100.000 30 0 0 3363 3392 33121849 33121878 6.850000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G089100 chr3D 45094137 45099038 4901 True 9053 9053 100.0000 1 4902 1 chr3D.!!$R1 4901
1 TraesCS3D01G089100 chr3B 70850221 70854395 4174 True 1326 2750 91.4445 1 4331 4 chr3B.!!$R2 4330
2 TraesCS3D01G089100 chr3B 70602823 70603501 678 True 917 917 90.9090 2709 3400 1 chr3B.!!$R1 691
3 TraesCS3D01G089100 chr3B 774807952 774808525 573 False 854 854 93.5540 4331 4902 1 chr3B.!!$F1 571
4 TraesCS3D01G089100 chr4D 418353544 418354119 575 False 852 852 93.4140 4328 4902 1 chr4D.!!$F1 574
5 TraesCS3D01G089100 chr5B 246949668 246950242 574 False 839 839 93.0430 4329 4902 1 chr5B.!!$F2 573
6 TraesCS3D01G089100 chr5B 58841971 58842543 572 True 819 819 92.4960 4332 4902 1 chr5B.!!$R1 570
7 TraesCS3D01G089100 chr7B 94755324 94755898 574 False 837 837 93.0430 4331 4902 1 chr7B.!!$F1 571
8 TraesCS3D01G089100 chr6B 176251793 176252377 584 False 835 835 92.4910 4319 4902 1 chr6B.!!$F1 583
9 TraesCS3D01G089100 chr7A 472629143 472629719 576 True 830 830 92.7210 4329 4902 1 chr7A.!!$R1 573
10 TraesCS3D01G089100 chr1A 53856746 53857321 575 False 830 830 92.7080 4329 4902 1 chr1A.!!$F1 573
11 TraesCS3D01G089100 chr2B 765479026 765479603 577 True 821 821 92.3880 4328 4902 1 chr2B.!!$R2 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
421 478 0.106769 TCTTTTGGAGCACACTGGCA 60.107 50.0 0.00 0.0 35.83 4.92 F
850 926 0.113776 ACTCTTCTCCCCGGTGTGTA 59.886 55.0 0.00 0.0 0.00 2.90 F
2054 2331 0.036010 AGTCCATTTCTGCACCCGAG 60.036 55.0 0.00 0.0 0.00 4.63 F
2338 2615 0.166814 GCCTCACGCATCAAGTTGTC 59.833 55.0 2.11 0.0 37.47 3.18 F
2422 2699 0.176680 CGGGTGCAGATGAGCTTACT 59.823 55.0 0.00 0.0 34.99 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2035 2312 0.036010 CTCGGGTGCAGAAATGGACT 60.036 55.0 0.00 0.0 0.00 3.85 R
2319 2596 0.166814 GACAACTTGATGCGTGAGGC 59.833 55.0 0.00 0.0 43.96 4.70 R
3211 3497 0.179936 CCTCATTCACCTCCTGGAGC 59.820 60.0 18.51 0.0 37.04 4.70 R
3634 3920 0.390735 GTTCCTTGCCGTCGTACCAT 60.391 55.0 0.00 0.0 0.00 3.55 R
4281 4585 0.391661 GCTCTTGCGACCTTGATGGA 60.392 55.0 0.00 0.0 39.71 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.707106 TTGACTACGACCTTGGGTGA 58.293 50.000 0.00 0.00 35.25 4.02
58 59 2.889678 GAGCCATCCAATCTTTCCATCC 59.110 50.000 0.00 0.00 0.00 3.51
60 61 1.610522 CCATCCAATCTTTCCATCCGC 59.389 52.381 0.00 0.00 0.00 5.54
68 69 0.171903 CTTTCCATCCGCTGCCAAAG 59.828 55.000 0.00 0.00 0.00 2.77
106 107 7.387119 ACATGCAACATGTCATGATATATCC 57.613 36.000 26.01 1.62 41.82 2.59
109 110 8.520351 CATGCAACATGTCATGATATATCCTTT 58.480 33.333 19.77 0.00 41.82 3.11
110 111 8.467963 TGCAACATGTCATGATATATCCTTTT 57.532 30.769 19.77 0.00 0.00 2.27
111 112 8.916062 TGCAACATGTCATGATATATCCTTTTT 58.084 29.630 19.77 0.00 0.00 1.94
112 113 9.403110 GCAACATGTCATGATATATCCTTTTTC 57.597 33.333 19.77 0.00 0.00 2.29
151 201 4.386954 GCTTTTTGGTGCTATTCTTTCAGC 59.613 41.667 0.00 0.00 38.31 4.26
152 202 4.519540 TTTTGGTGCTATTCTTTCAGCC 57.480 40.909 0.00 0.00 36.95 4.85
156 206 1.086696 TGCTATTCTTTCAGCCGCAC 58.913 50.000 0.00 0.00 36.95 5.34
194 244 2.073816 CGAGCCATGTTTACCGACTTT 58.926 47.619 0.00 0.00 0.00 2.66
217 267 4.454847 TGTCAATCTCGAGATATACCGGAC 59.545 45.833 27.52 23.33 33.73 4.79
219 269 3.715638 ATCTCGAGATATACCGGACCA 57.284 47.619 26.27 0.00 32.01 4.02
229 279 1.556373 TACCGGACCAGTCTCTCGGA 61.556 60.000 9.46 2.91 42.94 4.55
235 285 0.896019 ACCAGTCTCTCGGAGGTGTG 60.896 60.000 4.96 0.00 0.00 3.82
236 286 0.896019 CCAGTCTCTCGGAGGTGTGT 60.896 60.000 4.96 0.00 0.00 3.72
238 288 1.740585 CAGTCTCTCGGAGGTGTGTAG 59.259 57.143 4.96 0.00 0.00 2.74
239 289 1.096416 GTCTCTCGGAGGTGTGTAGG 58.904 60.000 4.96 0.00 0.00 3.18
240 290 0.989602 TCTCTCGGAGGTGTGTAGGA 59.010 55.000 4.96 0.00 0.00 2.94
241 291 1.564818 TCTCTCGGAGGTGTGTAGGAT 59.435 52.381 4.96 0.00 0.00 3.24
242 292 2.775960 TCTCTCGGAGGTGTGTAGGATA 59.224 50.000 4.96 0.00 0.00 2.59
244 294 3.487372 TCTCGGAGGTGTGTAGGATATG 58.513 50.000 4.96 0.00 0.00 1.78
245 295 1.961394 TCGGAGGTGTGTAGGATATGC 59.039 52.381 0.00 0.00 0.00 3.14
246 296 1.964223 CGGAGGTGTGTAGGATATGCT 59.036 52.381 1.17 1.17 0.00 3.79
247 297 2.365617 CGGAGGTGTGTAGGATATGCTT 59.634 50.000 0.65 0.00 0.00 3.91
248 298 3.733337 GGAGGTGTGTAGGATATGCTTG 58.267 50.000 0.65 0.00 0.00 4.01
249 299 3.134458 GAGGTGTGTAGGATATGCTTGC 58.866 50.000 0.65 0.00 0.00 4.01
250 300 2.505407 AGGTGTGTAGGATATGCTTGCA 59.495 45.455 0.65 0.00 0.00 4.08
255 312 1.466167 GTAGGATATGCTTGCATGCGG 59.534 52.381 18.54 9.64 35.36 5.69
259 316 2.489329 GGATATGCTTGCATGCGGTTAT 59.511 45.455 18.54 14.64 35.36 1.89
264 321 1.879380 GCTTGCATGCGGTTATATGGA 59.121 47.619 14.09 0.00 0.00 3.41
265 322 2.350772 GCTTGCATGCGGTTATATGGAC 60.351 50.000 14.09 0.00 0.00 4.02
291 348 4.512571 GTGTAAAACACTGGTACGTCCAAT 59.487 41.667 0.00 0.00 45.27 3.16
298 355 5.657474 ACACTGGTACGTCCAATATAACTG 58.343 41.667 0.00 0.00 46.59 3.16
299 356 4.506654 CACTGGTACGTCCAATATAACTGC 59.493 45.833 0.00 0.00 46.59 4.40
308 365 6.036735 ACGTCCAATATAACTGCATGTACAAC 59.963 38.462 0.00 0.00 0.00 3.32
314 371 9.056005 CAATATAACTGCATGTACAACCATACT 57.944 33.333 0.00 0.00 0.00 2.12
329 386 8.593945 ACAACCATACTTCAATGTTAATCCAT 57.406 30.769 0.00 0.00 0.00 3.41
356 413 7.660208 GGTTCTCATTGTAAAGTAGAAAGGTGA 59.340 37.037 0.00 0.00 33.86 4.02
411 468 2.033194 GGACCGCCGTCTTTTGGAG 61.033 63.158 5.18 0.00 39.15 3.86
421 478 0.106769 TCTTTTGGAGCACACTGGCA 60.107 50.000 0.00 0.00 35.83 4.92
431 488 1.973281 ACACTGGCATGCTTTCCGG 60.973 57.895 18.92 8.32 34.90 5.14
434 491 3.060020 CTGGCATGCTTTCCGGCAG 62.060 63.158 18.92 10.44 45.75 4.85
457 514 2.848691 AGGATTTATGCAGCTCTCAGC 58.151 47.619 0.00 0.00 42.84 4.26
488 545 5.615925 ACCAGTACAGAGGAATAACCATC 57.384 43.478 6.09 0.00 42.04 3.51
491 548 6.012858 ACCAGTACAGAGGAATAACCATCAAA 60.013 38.462 6.09 0.00 42.04 2.69
492 549 6.540189 CCAGTACAGAGGAATAACCATCAAAG 59.460 42.308 0.00 0.00 42.04 2.77
493 550 7.106239 CAGTACAGAGGAATAACCATCAAAGT 58.894 38.462 0.00 0.00 42.04 2.66
494 551 7.278868 CAGTACAGAGGAATAACCATCAAAGTC 59.721 40.741 0.00 0.00 42.04 3.01
495 552 6.380079 ACAGAGGAATAACCATCAAAGTCT 57.620 37.500 0.00 0.00 42.04 3.24
496 553 6.176183 ACAGAGGAATAACCATCAAAGTCTG 58.824 40.000 0.00 0.00 42.04 3.51
497 554 6.176183 CAGAGGAATAACCATCAAAGTCTGT 58.824 40.000 0.00 0.00 42.04 3.41
526 587 2.484662 GCATGTGAAATGCGCGGA 59.515 55.556 8.83 5.00 35.17 5.54
548 609 6.435904 CGGAGGAGAGGAAGACAGAATATATT 59.564 42.308 0.00 0.00 0.00 1.28
549 610 7.039363 CGGAGGAGAGGAAGACAGAATATATTT 60.039 40.741 0.00 0.00 0.00 1.40
562 623 9.542462 GACAGAATATATTTAGGTAACACTGCA 57.458 33.333 0.00 0.00 41.41 4.41
564 625 9.547753 CAGAATATATTTAGGTAACACTGCAGT 57.452 33.333 15.25 15.25 41.41 4.40
600 661 2.519377 TTCATTCCACTTGTCGTCGT 57.481 45.000 0.00 0.00 0.00 4.34
655 720 2.647299 TGGATCAAGGTACACCAACCAT 59.353 45.455 0.38 0.00 42.40 3.55
656 721 3.847184 TGGATCAAGGTACACCAACCATA 59.153 43.478 0.38 0.00 42.40 2.74
668 738 3.255395 CACCAACCATATGCTTGTTGTCA 59.745 43.478 16.96 0.00 38.10 3.58
687 757 5.821204 TGTCATACGGATATATGCTCATCG 58.179 41.667 2.53 0.00 33.31 3.84
715 789 1.064003 AGGTTGTATGTGTGGGCTCA 58.936 50.000 0.00 0.00 0.00 4.26
721 795 0.546507 TATGTGTGGGCTCAGGTGGA 60.547 55.000 0.00 0.00 0.00 4.02
742 816 2.347490 GCTGAAGGTTCTCGGGCA 59.653 61.111 0.00 0.00 0.00 5.36
745 819 0.250295 CTGAAGGTTCTCGGGCACAA 60.250 55.000 0.00 0.00 0.00 3.33
845 921 3.003763 GGCACTCTTCTCCCCGGT 61.004 66.667 0.00 0.00 0.00 5.28
848 924 1.293498 CACTCTTCTCCCCGGTGTG 59.707 63.158 0.00 0.00 0.00 3.82
849 925 1.152312 ACTCTTCTCCCCGGTGTGT 60.152 57.895 0.00 0.00 0.00 3.72
850 926 0.113776 ACTCTTCTCCCCGGTGTGTA 59.886 55.000 0.00 0.00 0.00 2.90
851 927 0.818296 CTCTTCTCCCCGGTGTGTAG 59.182 60.000 0.00 0.00 0.00 2.74
852 928 1.218316 CTTCTCCCCGGTGTGTAGC 59.782 63.158 0.00 0.00 0.00 3.58
853 929 1.534476 TTCTCCCCGGTGTGTAGCA 60.534 57.895 0.00 0.00 0.00 3.49
854 930 1.823169 TTCTCCCCGGTGTGTAGCAC 61.823 60.000 0.00 0.00 46.97 4.40
875 951 2.505498 CGTGCATCAGTCCGTACGC 61.505 63.158 10.49 0.00 0.00 4.42
893 969 1.447489 CCTTGAGCTCTGAGCCACG 60.447 63.158 25.09 18.33 43.77 4.94
916 996 4.380550 GGAGATTATCACACTGTCACACGA 60.381 45.833 0.00 0.00 0.00 4.35
958 1038 5.358725 GCTAAGGTAAGCTAGCTAGATAGGG 59.641 48.000 25.15 8.07 39.50 3.53
959 1039 5.602291 AAGGTAAGCTAGCTAGATAGGGA 57.398 43.478 25.15 1.91 35.05 4.20
961 1041 4.017867 AGGTAAGCTAGCTAGATAGGGAGG 60.018 50.000 25.15 0.00 34.21 4.30
962 1042 4.018233 GGTAAGCTAGCTAGATAGGGAGGA 60.018 50.000 25.15 0.00 0.00 3.71
963 1043 4.750833 AAGCTAGCTAGATAGGGAGGAA 57.249 45.455 25.15 0.00 0.00 3.36
964 1044 4.316025 AGCTAGCTAGATAGGGAGGAAG 57.684 50.000 25.15 0.00 0.00 3.46
965 1045 2.758423 GCTAGCTAGATAGGGAGGAAGC 59.242 54.545 25.15 2.45 0.00 3.86
966 1046 3.563479 GCTAGCTAGATAGGGAGGAAGCT 60.563 52.174 25.15 0.00 42.58 3.74
967 1047 4.324719 GCTAGCTAGATAGGGAGGAAGCTA 60.325 50.000 25.15 0.00 40.56 3.32
968 1048 4.965283 AGCTAGATAGGGAGGAAGCTAT 57.035 45.455 0.00 0.00 38.48 2.97
1007 1095 4.715523 CCGGCCGAACATGGTGGT 62.716 66.667 30.73 0.00 0.00 4.16
1128 1216 0.251354 TCCTGTCAATGCTGCTCCTC 59.749 55.000 0.00 0.00 0.00 3.71
1131 1219 1.817099 GTCAATGCTGCTCCTCCGG 60.817 63.158 0.00 0.00 0.00 5.14
1161 1249 0.809385 CCAGCTACTCCTTCGTCGAA 59.191 55.000 7.57 7.57 0.00 3.71
1375 1463 7.372415 ATCTTCAGATGTACGTACGCACGAA 62.372 44.000 16.41 17.28 41.02 3.85
1376 1464 8.588915 ATCTTCAGATGTACGTACGCACGAAT 62.589 42.308 16.41 7.40 41.02 3.34
1407 1495 2.805671 CACACACCACACACGTATTGAT 59.194 45.455 3.45 0.00 0.00 2.57
1417 1505 5.511377 CACACACGTATTGATTATTTGCACC 59.489 40.000 3.45 0.00 0.00 5.01
1424 1512 7.642194 ACGTATTGATTATTTGCACCAAATACG 59.358 33.333 20.56 20.56 43.24 3.06
1430 1518 6.957984 TTATTTGCACCAAATACGTACGTA 57.042 33.333 28.62 28.62 43.24 3.57
1432 1520 4.201608 ATTTGCACCAAATACGTACGTACG 60.202 41.667 38.49 38.49 43.78 3.67
1434 1522 8.500794 ATTTGCACCAAATACGTACGTACGTG 62.501 42.308 46.33 35.53 46.10 4.49
1469 1557 9.880157 AAATTAAGAATCCACCTTGATCATTTG 57.120 29.630 0.00 0.00 0.00 2.32
1474 1562 8.827832 AGAATCCACCTTGATCATTTGATTAA 57.172 30.769 0.00 0.00 34.37 1.40
1475 1563 8.910944 AGAATCCACCTTGATCATTTGATTAAG 58.089 33.333 14.79 14.79 43.59 1.85
1478 1566 9.699410 ATCCACCTTGATCATTTGATTAAGTAA 57.301 29.630 18.31 6.45 42.90 2.24
1479 1567 9.699410 TCCACCTTGATCATTTGATTAAGTAAT 57.301 29.630 18.31 6.28 42.90 1.89
1514 1604 7.368059 GTGTTAAACTTCAAAATGAGGGGTAG 58.632 38.462 0.00 0.00 0.00 3.18
1541 1797 0.390860 GCACATACCGCTCAGAGGAT 59.609 55.000 0.00 0.00 0.00 3.24
1596 1873 8.365210 CACAAACATGTATTCGCAAGTAAAATC 58.635 33.333 0.00 0.00 39.48 2.17
1604 1881 8.653338 TGTATTCGCAAGTAAAATCTAGTGAAC 58.347 33.333 0.00 0.00 39.48 3.18
1608 1885 6.073440 TCGCAAGTAAAATCTAGTGAACCAAC 60.073 38.462 0.00 0.00 39.48 3.77
1620 1897 7.819644 TCTAGTGAACCAACAAATTGATGATG 58.180 34.615 4.76 0.00 38.15 3.07
1713 1990 2.133281 ATGCAGGCAAGCTTGTGATA 57.867 45.000 26.55 11.49 34.99 2.15
1774 2051 2.131294 GATGATCGACGGGAGGACGG 62.131 65.000 0.00 0.00 38.39 4.79
1798 2075 2.914777 GAAGCCAGCCACGCTAGAGG 62.915 65.000 0.00 0.00 36.40 3.69
1801 2078 2.351244 CCAGCCACGCTAGAGGTGA 61.351 63.158 13.99 0.00 36.40 4.02
1848 2125 3.335534 GTGCACGACACGGTGGTC 61.336 66.667 13.48 6.84 40.07 4.02
1905 2182 4.681978 GTGGCGGCACTCCTCGTT 62.682 66.667 32.54 0.00 32.17 3.85
2047 2324 4.889832 ATGATCGAAAGTCCATTTCTGC 57.110 40.909 0.00 0.00 44.39 4.26
2048 2325 3.673902 TGATCGAAAGTCCATTTCTGCA 58.326 40.909 0.00 0.00 44.39 4.41
2049 2326 3.436704 TGATCGAAAGTCCATTTCTGCAC 59.563 43.478 0.00 0.00 44.39 4.57
2050 2327 2.151202 TCGAAAGTCCATTTCTGCACC 58.849 47.619 0.00 0.00 44.39 5.01
2051 2328 1.200020 CGAAAGTCCATTTCTGCACCC 59.800 52.381 0.00 0.00 44.39 4.61
2052 2329 1.200020 GAAAGTCCATTTCTGCACCCG 59.800 52.381 0.00 0.00 43.42 5.28
2053 2330 0.400213 AAGTCCATTTCTGCACCCGA 59.600 50.000 0.00 0.00 0.00 5.14
2054 2331 0.036010 AGTCCATTTCTGCACCCGAG 60.036 55.000 0.00 0.00 0.00 4.63
2055 2332 1.377202 TCCATTTCTGCACCCGAGC 60.377 57.895 0.00 0.00 0.00 5.03
2056 2333 1.377725 CCATTTCTGCACCCGAGCT 60.378 57.895 0.00 0.00 34.99 4.09
2057 2334 1.372087 CCATTTCTGCACCCGAGCTC 61.372 60.000 2.73 2.73 34.99 4.09
2058 2335 1.448540 ATTTCTGCACCCGAGCTCG 60.449 57.895 29.06 29.06 39.44 5.03
2059 2336 2.172483 ATTTCTGCACCCGAGCTCGT 62.172 55.000 32.41 14.48 37.74 4.18
2060 2337 2.765250 TTTCTGCACCCGAGCTCGTC 62.765 60.000 32.41 18.91 37.74 4.20
2061 2338 3.753434 CTGCACCCGAGCTCGTCT 61.753 66.667 32.41 15.59 37.74 4.18
2062 2339 2.360726 TGCACCCGAGCTCGTCTA 60.361 61.111 32.41 12.73 37.74 2.59
2063 2340 2.102553 GCACCCGAGCTCGTCTAC 59.897 66.667 32.41 16.65 37.74 2.59
2064 2341 2.697761 GCACCCGAGCTCGTCTACA 61.698 63.158 32.41 0.00 37.74 2.74
2065 2342 1.136984 CACCCGAGCTCGTCTACAC 59.863 63.158 32.41 0.00 37.74 2.90
2066 2343 2.045131 ACCCGAGCTCGTCTACACC 61.045 63.158 32.41 0.00 37.74 4.16
2067 2344 2.772691 CCCGAGCTCGTCTACACCC 61.773 68.421 32.41 0.00 37.74 4.61
2068 2345 2.044555 CCGAGCTCGTCTACACCCA 61.045 63.158 32.41 0.00 37.74 4.51
2069 2346 1.136984 CGAGCTCGTCTACACCCAC 59.863 63.158 27.79 0.00 34.11 4.61
2070 2347 1.583495 CGAGCTCGTCTACACCCACA 61.583 60.000 27.79 0.00 34.11 4.17
2071 2348 0.818296 GAGCTCGTCTACACCCACAT 59.182 55.000 0.00 0.00 0.00 3.21
2072 2349 1.204941 GAGCTCGTCTACACCCACATT 59.795 52.381 0.00 0.00 0.00 2.71
2073 2350 1.066858 AGCTCGTCTACACCCACATTG 60.067 52.381 0.00 0.00 0.00 2.82
2074 2351 1.067142 GCTCGTCTACACCCACATTGA 60.067 52.381 0.00 0.00 0.00 2.57
2075 2352 2.607187 CTCGTCTACACCCACATTGAC 58.393 52.381 0.00 0.00 0.00 3.18
2076 2353 1.068125 TCGTCTACACCCACATTGACG 60.068 52.381 0.00 0.00 45.51 4.35
2077 2354 1.068125 CGTCTACACCCACATTGACGA 60.068 52.381 7.43 0.00 46.58 4.20
2078 2355 2.608506 CGTCTACACCCACATTGACGAA 60.609 50.000 7.43 0.00 46.58 3.85
2079 2356 3.395639 GTCTACACCCACATTGACGAAA 58.604 45.455 0.00 0.00 0.00 3.46
2080 2357 3.810941 GTCTACACCCACATTGACGAAAA 59.189 43.478 0.00 0.00 0.00 2.29
2081 2358 4.273969 GTCTACACCCACATTGACGAAAAA 59.726 41.667 0.00 0.00 0.00 1.94
2146 2423 4.902443 TTTTGTGCGGTAGACAATTTGA 57.098 36.364 2.79 0.00 33.41 2.69
2147 2424 5.446143 TTTTGTGCGGTAGACAATTTGAT 57.554 34.783 2.79 0.00 33.41 2.57
2148 2425 4.418013 TTGTGCGGTAGACAATTTGATG 57.582 40.909 2.79 0.00 0.00 3.07
2149 2426 2.161410 TGTGCGGTAGACAATTTGATGC 59.839 45.455 2.79 0.00 0.00 3.91
2150 2427 1.396648 TGCGGTAGACAATTTGATGCG 59.603 47.619 2.79 0.00 0.00 4.73
2151 2428 1.396996 GCGGTAGACAATTTGATGCGT 59.603 47.619 2.79 0.00 0.00 5.24
2152 2429 2.787723 GCGGTAGACAATTTGATGCGTG 60.788 50.000 2.79 0.00 0.00 5.34
2153 2430 2.670905 CGGTAGACAATTTGATGCGTGA 59.329 45.455 2.79 0.00 0.00 4.35
2154 2431 3.242091 CGGTAGACAATTTGATGCGTGAG 60.242 47.826 2.79 0.00 0.00 3.51
2155 2432 3.063997 GGTAGACAATTTGATGCGTGAGG 59.936 47.826 2.79 0.00 0.00 3.86
2156 2433 3.057969 AGACAATTTGATGCGTGAGGA 57.942 42.857 2.79 0.00 0.00 3.71
2157 2434 2.744202 AGACAATTTGATGCGTGAGGAC 59.256 45.455 2.79 0.00 0.00 3.85
2158 2435 2.744202 GACAATTTGATGCGTGAGGACT 59.256 45.455 2.79 0.00 0.00 3.85
2159 2436 3.932710 GACAATTTGATGCGTGAGGACTA 59.067 43.478 2.79 0.00 0.00 2.59
2160 2437 3.684788 ACAATTTGATGCGTGAGGACTAC 59.315 43.478 2.79 0.00 0.00 2.73
2161 2438 3.895232 ATTTGATGCGTGAGGACTACT 57.105 42.857 0.00 0.00 0.00 2.57
2162 2439 2.941453 TTGATGCGTGAGGACTACTC 57.059 50.000 0.00 0.00 46.78 2.59
2163 2440 1.103803 TGATGCGTGAGGACTACTCC 58.896 55.000 0.00 0.00 46.01 3.85
2164 2441 1.103803 GATGCGTGAGGACTACTCCA 58.896 55.000 0.00 0.00 46.01 3.86
2165 2442 1.476891 GATGCGTGAGGACTACTCCAA 59.523 52.381 0.00 0.00 46.01 3.53
2166 2443 1.557099 TGCGTGAGGACTACTCCAAT 58.443 50.000 0.00 0.00 46.01 3.16
2167 2444 1.899814 TGCGTGAGGACTACTCCAATT 59.100 47.619 0.00 0.00 46.01 2.32
2168 2445 2.301870 TGCGTGAGGACTACTCCAATTT 59.698 45.455 0.00 0.00 46.01 1.82
2169 2446 3.244422 TGCGTGAGGACTACTCCAATTTT 60.244 43.478 0.00 0.00 46.01 1.82
2170 2447 3.751698 GCGTGAGGACTACTCCAATTTTT 59.248 43.478 0.00 0.00 46.01 1.94
2171 2448 4.933400 GCGTGAGGACTACTCCAATTTTTA 59.067 41.667 0.00 0.00 46.01 1.52
2172 2449 5.410439 GCGTGAGGACTACTCCAATTTTTAA 59.590 40.000 0.00 0.00 46.01 1.52
2173 2450 6.072893 GCGTGAGGACTACTCCAATTTTTAAA 60.073 38.462 0.00 0.00 46.01 1.52
2174 2451 7.361799 GCGTGAGGACTACTCCAATTTTTAAAT 60.362 37.037 0.00 0.00 46.01 1.40
2175 2452 8.175716 CGTGAGGACTACTCCAATTTTTAAATC 58.824 37.037 0.00 0.00 46.01 2.17
2176 2453 9.010029 GTGAGGACTACTCCAATTTTTAAATCA 57.990 33.333 0.00 0.00 46.01 2.57
2177 2454 9.753674 TGAGGACTACTCCAATTTTTAAATCAT 57.246 29.630 0.00 0.00 46.01 2.45
2194 2471 5.831702 AATCATTTGGACATCTGAGAAGC 57.168 39.130 0.00 0.00 0.00 3.86
2195 2472 4.564782 TCATTTGGACATCTGAGAAGCT 57.435 40.909 0.00 0.00 0.00 3.74
2196 2473 4.511527 TCATTTGGACATCTGAGAAGCTC 58.488 43.478 0.00 0.00 0.00 4.09
2197 2474 4.224594 TCATTTGGACATCTGAGAAGCTCT 59.775 41.667 0.00 0.00 0.00 4.09
2198 2475 3.883830 TTGGACATCTGAGAAGCTCTC 57.116 47.619 6.31 6.31 43.65 3.20
2228 2505 8.499288 AAAAAGACAAATTGGGGGTCTATAAA 57.501 30.769 0.00 0.00 40.80 1.40
2229 2506 8.499288 AAAAGACAAATTGGGGGTCTATAAAA 57.501 30.769 0.00 0.00 40.80 1.52
2230 2507 8.499288 AAAGACAAATTGGGGGTCTATAAAAA 57.501 30.769 0.00 0.00 40.80 1.94
2231 2508 8.679344 AAGACAAATTGGGGGTCTATAAAAAT 57.321 30.769 0.00 0.00 40.80 1.82
2232 2509 8.078060 AGACAAATTGGGGGTCTATAAAAATG 57.922 34.615 0.00 0.00 39.95 2.32
2233 2510 7.678171 AGACAAATTGGGGGTCTATAAAAATGT 59.322 33.333 0.00 0.00 39.95 2.71
2234 2511 8.213489 ACAAATTGGGGGTCTATAAAAATGTT 57.787 30.769 0.00 0.00 0.00 2.71
2235 2512 8.664992 ACAAATTGGGGGTCTATAAAAATGTTT 58.335 29.630 0.00 0.00 0.00 2.83
2240 2517 8.903059 TGGGGGTCTATAAAAATGTTTATTGT 57.097 30.769 6.19 0.00 39.93 2.71
2241 2518 9.327731 TGGGGGTCTATAAAAATGTTTATTGTT 57.672 29.630 6.19 0.00 39.93 2.83
2256 2533 8.918961 TGTTTATTGTTTCTGTACTGTTTTGG 57.081 30.769 0.00 0.00 0.00 3.28
2257 2534 8.524487 TGTTTATTGTTTCTGTACTGTTTTGGT 58.476 29.630 0.00 0.00 0.00 3.67
2258 2535 9.361315 GTTTATTGTTTCTGTACTGTTTTGGTT 57.639 29.630 0.00 0.00 0.00 3.67
2259 2536 9.575783 TTTATTGTTTCTGTACTGTTTTGGTTC 57.424 29.630 0.00 0.00 0.00 3.62
2260 2537 5.224562 TGTTTCTGTACTGTTTTGGTTCG 57.775 39.130 0.00 0.00 0.00 3.95
2261 2538 4.936411 TGTTTCTGTACTGTTTTGGTTCGA 59.064 37.500 0.00 0.00 0.00 3.71
2262 2539 5.587043 TGTTTCTGTACTGTTTTGGTTCGAT 59.413 36.000 0.00 0.00 0.00 3.59
2263 2540 6.094325 TGTTTCTGTACTGTTTTGGTTCGATT 59.906 34.615 0.00 0.00 0.00 3.34
2264 2541 6.687081 TTCTGTACTGTTTTGGTTCGATTT 57.313 33.333 0.00 0.00 0.00 2.17
2265 2542 6.055231 TCTGTACTGTTTTGGTTCGATTTG 57.945 37.500 0.00 0.00 0.00 2.32
2266 2543 5.587043 TCTGTACTGTTTTGGTTCGATTTGT 59.413 36.000 0.00 0.00 0.00 2.83
2267 2544 5.812652 TGTACTGTTTTGGTTCGATTTGTC 58.187 37.500 0.00 0.00 0.00 3.18
2268 2545 5.587043 TGTACTGTTTTGGTTCGATTTGTCT 59.413 36.000 0.00 0.00 0.00 3.41
2269 2546 5.576447 ACTGTTTTGGTTCGATTTGTCTT 57.424 34.783 0.00 0.00 0.00 3.01
2270 2547 5.961272 ACTGTTTTGGTTCGATTTGTCTTT 58.039 33.333 0.00 0.00 0.00 2.52
2271 2548 6.394809 ACTGTTTTGGTTCGATTTGTCTTTT 58.605 32.000 0.00 0.00 0.00 2.27
2272 2549 6.871492 ACTGTTTTGGTTCGATTTGTCTTTTT 59.129 30.769 0.00 0.00 0.00 1.94
2300 2577 6.175712 GAGAGCTACTCAAAAGTCCAAATG 57.824 41.667 7.93 0.00 44.36 2.32
2301 2578 5.869579 AGAGCTACTCAAAAGTCCAAATGA 58.130 37.500 0.00 0.00 36.92 2.57
2302 2579 5.703130 AGAGCTACTCAAAAGTCCAAATGAC 59.297 40.000 0.00 0.00 37.31 3.06
2303 2580 6.465035 AGAGCTACTCAAAAGTCCAAATGACT 60.465 38.462 0.00 0.00 43.82 3.41
2316 2593 6.881017 GTCCAAATGACTTGAAATTTGAAGC 58.119 36.000 16.14 10.14 43.41 3.86
2317 2594 6.479660 GTCCAAATGACTTGAAATTTGAAGCA 59.520 34.615 16.14 14.64 43.41 3.91
2318 2595 6.702723 TCCAAATGACTTGAAATTTGAAGCAG 59.297 34.615 16.14 5.35 43.41 4.24
2319 2596 6.073440 CCAAATGACTTGAAATTTGAAGCAGG 60.073 38.462 16.14 9.54 43.41 4.85
2320 2597 3.981211 TGACTTGAAATTTGAAGCAGGC 58.019 40.909 16.14 5.53 0.00 4.85
2321 2598 3.243839 TGACTTGAAATTTGAAGCAGGCC 60.244 43.478 16.14 0.00 0.00 5.19
2322 2599 2.967887 ACTTGAAATTTGAAGCAGGCCT 59.032 40.909 16.14 0.00 0.00 5.19
2323 2600 3.006217 ACTTGAAATTTGAAGCAGGCCTC 59.994 43.478 16.14 0.00 0.00 4.70
2324 2601 2.596346 TGAAATTTGAAGCAGGCCTCA 58.404 42.857 0.00 0.00 0.00 3.86
2325 2602 2.297033 TGAAATTTGAAGCAGGCCTCAC 59.703 45.455 0.00 0.00 0.00 3.51
2326 2603 0.883833 AATTTGAAGCAGGCCTCACG 59.116 50.000 0.00 0.00 0.00 4.35
2327 2604 1.589716 ATTTGAAGCAGGCCTCACGC 61.590 55.000 0.00 3.11 0.00 5.34
2328 2605 2.956799 TTTGAAGCAGGCCTCACGCA 62.957 55.000 15.36 3.75 40.31 5.24
2329 2606 2.437359 GAAGCAGGCCTCACGCAT 60.437 61.111 15.36 3.63 40.31 4.73
2330 2607 2.437359 AAGCAGGCCTCACGCATC 60.437 61.111 15.36 0.00 40.31 3.91
2331 2608 3.258228 AAGCAGGCCTCACGCATCA 62.258 57.895 15.36 0.00 40.31 3.07
2332 2609 2.747460 GCAGGCCTCACGCATCAA 60.747 61.111 0.00 0.00 40.31 2.57
2333 2610 2.758089 GCAGGCCTCACGCATCAAG 61.758 63.158 0.00 0.00 40.31 3.02
2334 2611 1.376424 CAGGCCTCACGCATCAAGT 60.376 57.895 0.00 0.00 40.31 3.16
2335 2612 0.957395 CAGGCCTCACGCATCAAGTT 60.957 55.000 0.00 0.00 40.31 2.66
2336 2613 0.957395 AGGCCTCACGCATCAAGTTG 60.957 55.000 0.00 0.00 40.31 3.16
2337 2614 1.237285 GGCCTCACGCATCAAGTTGT 61.237 55.000 2.11 0.00 40.31 3.32
2338 2615 0.166814 GCCTCACGCATCAAGTTGTC 59.833 55.000 2.11 0.00 37.47 3.18
2339 2616 1.800805 CCTCACGCATCAAGTTGTCT 58.199 50.000 2.11 0.00 0.00 3.41
2340 2617 2.930887 GCCTCACGCATCAAGTTGTCTA 60.931 50.000 2.11 0.00 37.47 2.59
2341 2618 2.668457 CCTCACGCATCAAGTTGTCTAC 59.332 50.000 2.11 0.00 0.00 2.59
2342 2619 2.668457 CTCACGCATCAAGTTGTCTACC 59.332 50.000 2.11 0.00 0.00 3.18
2343 2620 1.390123 CACGCATCAAGTTGTCTACCG 59.610 52.381 2.11 3.22 0.00 4.02
2344 2621 0.370273 CGCATCAAGTTGTCTACCGC 59.630 55.000 2.11 0.00 0.00 5.68
2345 2622 1.438651 GCATCAAGTTGTCTACCGCA 58.561 50.000 2.11 0.00 0.00 5.69
2346 2623 1.128692 GCATCAAGTTGTCTACCGCAC 59.871 52.381 2.11 0.00 0.00 5.34
2347 2624 2.412870 CATCAAGTTGTCTACCGCACA 58.587 47.619 2.11 0.00 0.00 4.57
2348 2625 2.605837 TCAAGTTGTCTACCGCACAA 57.394 45.000 2.11 0.00 0.00 3.33
2349 2626 2.907634 TCAAGTTGTCTACCGCACAAA 58.092 42.857 2.11 0.00 35.53 2.83
2350 2627 3.271729 TCAAGTTGTCTACCGCACAAAA 58.728 40.909 2.11 0.00 35.53 2.44
2351 2628 3.690139 TCAAGTTGTCTACCGCACAAAAA 59.310 39.130 2.11 0.00 35.53 1.94
2405 2682 6.470557 TTTTACGAATTCTTGTCTAACCGG 57.529 37.500 0.00 0.00 0.00 5.28
2406 2683 2.968675 ACGAATTCTTGTCTAACCGGG 58.031 47.619 6.32 0.00 0.00 5.73
2407 2684 2.301009 ACGAATTCTTGTCTAACCGGGT 59.699 45.455 6.32 0.00 0.00 5.28
2408 2685 2.671396 CGAATTCTTGTCTAACCGGGTG 59.329 50.000 0.00 0.00 0.00 4.61
2409 2686 2.109425 ATTCTTGTCTAACCGGGTGC 57.891 50.000 0.00 0.00 0.00 5.01
2410 2687 0.759959 TTCTTGTCTAACCGGGTGCA 59.240 50.000 0.00 0.00 0.00 4.57
2411 2688 0.320374 TCTTGTCTAACCGGGTGCAG 59.680 55.000 0.00 1.10 0.00 4.41
2412 2689 0.320374 CTTGTCTAACCGGGTGCAGA 59.680 55.000 0.00 3.87 0.00 4.26
2413 2690 0.981183 TTGTCTAACCGGGTGCAGAT 59.019 50.000 0.00 0.00 0.00 2.90
2414 2691 0.249120 TGTCTAACCGGGTGCAGATG 59.751 55.000 0.00 0.00 0.00 2.90
2415 2692 0.535335 GTCTAACCGGGTGCAGATGA 59.465 55.000 0.00 0.00 0.00 2.92
2416 2693 0.824109 TCTAACCGGGTGCAGATGAG 59.176 55.000 0.00 0.00 0.00 2.90
2417 2694 0.811616 CTAACCGGGTGCAGATGAGC 60.812 60.000 0.00 0.00 0.00 4.26
2418 2695 1.264749 TAACCGGGTGCAGATGAGCT 61.265 55.000 0.00 0.00 34.99 4.09
2419 2696 2.129555 AACCGGGTGCAGATGAGCTT 62.130 55.000 6.32 0.00 34.99 3.74
2420 2697 1.264749 ACCGGGTGCAGATGAGCTTA 61.265 55.000 6.32 0.00 34.99 3.09
2421 2698 0.811616 CCGGGTGCAGATGAGCTTAC 60.812 60.000 0.00 0.00 34.99 2.34
2422 2699 0.176680 CGGGTGCAGATGAGCTTACT 59.823 55.000 0.00 0.00 34.99 2.24
2423 2700 1.804372 CGGGTGCAGATGAGCTTACTC 60.804 57.143 0.00 0.00 43.76 2.59
2443 2720 9.658799 CTTACTCATGAATGATCCCGTAATAAT 57.341 33.333 0.00 0.00 36.02 1.28
2444 2721 9.653287 TTACTCATGAATGATCCCGTAATAATC 57.347 33.333 0.00 0.00 36.02 1.75
2445 2722 7.679783 ACTCATGAATGATCCCGTAATAATCA 58.320 34.615 0.00 0.00 36.02 2.57
2450 2727 8.972458 TGAATGATCCCGTAATAATCAGAAAA 57.028 30.769 0.00 0.00 33.24 2.29
2501 2778 3.007182 ACACATTGCAATGGGAGAAAAGG 59.993 43.478 40.88 20.23 42.45 3.11
2532 2810 6.751514 TGTGTGAAATTTGTCTACACAACT 57.248 33.333 17.70 0.00 45.85 3.16
2637 2915 7.110155 ACTGAACATAATAAACATCCGGTCTT 58.890 34.615 0.00 0.00 0.00 3.01
2751 3029 2.009774 CCTCCAGTGTTTTATGCCTCG 58.990 52.381 0.00 0.00 0.00 4.63
2798 3083 5.050499 CGCTTTTGAAATGGCAATACAAACA 60.050 36.000 13.03 6.90 31.71 2.83
2806 3091 9.941325 TGAAATGGCAATACAAACAGAATATTT 57.059 25.926 0.00 0.00 0.00 1.40
2877 3162 1.944709 ACAACGGTTGGAACAGTAAGC 59.055 47.619 23.51 0.00 42.39 3.09
2960 3246 3.058777 TCGCCGTTTGAAAATACTTGTCC 60.059 43.478 0.00 0.00 0.00 4.02
2973 3259 2.359900 ACTTGTCCGAGAAATGGATGC 58.640 47.619 0.00 0.00 37.93 3.91
3211 3497 4.082523 TTCCTCAAGGCGCTCGGG 62.083 66.667 7.64 3.18 34.44 5.14
3224 3510 3.965026 CTCGGGCTCCAGGAGGTGA 62.965 68.421 18.83 0.00 35.89 4.02
3226 3512 2.370445 CGGGCTCCAGGAGGTGAAT 61.370 63.158 18.83 0.00 35.89 2.57
3228 3514 1.274703 GGGCTCCAGGAGGTGAATGA 61.275 60.000 18.83 0.00 35.89 2.57
3229 3515 0.179936 GGCTCCAGGAGGTGAATGAG 59.820 60.000 18.83 0.00 35.89 2.90
3230 3516 0.179936 GCTCCAGGAGGTGAATGAGG 59.820 60.000 18.83 0.00 35.89 3.86
3233 3519 1.362584 TCCAGGAGGTGAATGAGGAGA 59.637 52.381 0.00 0.00 35.89 3.71
3235 3521 2.573462 CCAGGAGGTGAATGAGGAGAAA 59.427 50.000 0.00 0.00 0.00 2.52
3236 3522 3.370315 CCAGGAGGTGAATGAGGAGAAAG 60.370 52.174 0.00 0.00 0.00 2.62
3499 3785 0.386352 TCGGCGACAGTAACTTCGTG 60.386 55.000 4.99 0.00 37.56 4.35
3512 3798 1.067776 ACTTCGTGGACTTCCTAAGCG 60.068 52.381 0.00 0.00 36.82 4.68
3517 3803 2.125673 GACTTCCTAAGCGCCGCA 60.126 61.111 13.36 0.00 0.00 5.69
3629 3915 1.588824 CGGGACCTGCGTGTACTACA 61.589 60.000 0.00 0.00 0.00 2.74
3634 3920 0.241749 CCTGCGTGTACTACAACGGA 59.758 55.000 5.72 2.08 0.00 4.69
3652 3938 0.108520 GATGGTACGACGGCAAGGAA 60.109 55.000 0.00 0.00 0.00 3.36
3914 4202 3.788797 GCAAATTTAAGACAGCGATCGGG 60.789 47.826 18.30 0.00 0.00 5.14
3934 4222 0.462759 CGGCTGGAAAGATGAGGGTC 60.463 60.000 0.00 0.00 0.00 4.46
4005 4295 0.525311 TTGTGTGTGCAAGGTGTGTG 59.475 50.000 0.00 0.00 0.00 3.82
4006 4296 0.607762 TGTGTGTGCAAGGTGTGTGT 60.608 50.000 0.00 0.00 0.00 3.72
4007 4297 0.179166 GTGTGTGCAAGGTGTGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
4008 4298 1.226660 GTGTGCAAGGTGTGTGTGC 60.227 57.895 0.00 0.00 38.78 4.57
4009 4299 1.676967 TGTGCAAGGTGTGTGTGCA 60.677 52.632 0.00 0.00 45.62 4.57
4010 4300 3.195683 TGCAAGGTGTGTGTGCAC 58.804 55.556 10.75 10.75 43.09 4.57
4011 4301 1.378382 TGCAAGGTGTGTGTGCACT 60.378 52.632 19.41 0.00 43.09 4.40
4012 4302 0.107459 TGCAAGGTGTGTGTGCACTA 60.107 50.000 19.41 4.18 43.09 2.74
4013 4303 1.238439 GCAAGGTGTGTGTGCACTAT 58.762 50.000 19.41 0.00 45.44 2.12
4014 4304 1.608590 GCAAGGTGTGTGTGCACTATT 59.391 47.619 19.41 0.00 45.44 1.73
4015 4305 2.605338 GCAAGGTGTGTGTGCACTATTG 60.605 50.000 19.41 12.26 45.44 1.90
4035 4325 7.939039 ACTATTGTCTGAATAATACCATGGGTG 59.061 37.037 18.09 0.00 36.19 4.61
4044 4334 3.926058 ATACCATGGGTGAGTGTAACC 57.074 47.619 18.09 0.00 34.55 2.85
4065 4355 4.245660 CCCGCTGTGACCACTAATATATG 58.754 47.826 1.62 0.00 0.00 1.78
4233 4537 7.704472 TCGACAAGCAAAATTGTAAATTGAGTT 59.296 29.630 0.00 0.00 43.32 3.01
4250 4554 3.055819 TGAGTTGGGCTAGAACATGAGAC 60.056 47.826 0.00 0.00 0.00 3.36
4261 4565 3.008485 AGAACATGAGACCCCAAACTCTC 59.992 47.826 0.00 0.00 34.57 3.20
4262 4566 1.276421 ACATGAGACCCCAAACTCTCG 59.724 52.381 0.00 0.00 36.47 4.04
4269 4573 1.289066 CCCAAACTCTCGCTCGACA 59.711 57.895 0.00 0.00 0.00 4.35
4271 4575 1.347817 CCAAACTCTCGCTCGACAGC 61.348 60.000 0.00 0.00 42.96 4.40
4281 4585 3.052620 CTCGACAGCGTCCCATCGT 62.053 63.158 3.65 0.00 38.98 3.73
4288 4592 1.153449 GCGTCCCATCGTCCATCAA 60.153 57.895 0.00 0.00 0.00 2.57
4324 4628 3.991051 ATATCTGGCGGGCCGACG 61.991 66.667 33.44 23.49 37.93 5.12
4392 4696 1.202698 ACACTTCTCAACCCAGTCTGC 60.203 52.381 0.00 0.00 0.00 4.26
4415 4720 2.968574 TGAGCAAAAACAGCCCCAAATA 59.031 40.909 0.00 0.00 0.00 1.40
4455 4760 0.464554 GTTGCCTGCATCTAGGGTCC 60.465 60.000 0.00 0.00 38.32 4.46
4479 4784 6.425135 CCTGCATTAGGTAATACGCAAGTGT 61.425 44.000 0.00 0.00 46.95 3.55
4543 4850 1.372872 GTTTGGTTGCCCGCATGAC 60.373 57.895 0.00 0.00 0.00 3.06
4807 5115 0.253044 AGTGCTCGTGCCATGGTATT 59.747 50.000 14.67 0.00 38.71 1.89
4811 5119 0.930310 CTCGTGCCATGGTATTGTCG 59.070 55.000 14.67 8.93 0.00 4.35
4862 5170 0.895530 TCGAAGCCGGAAATGACTCT 59.104 50.000 5.05 0.00 36.24 3.24
4877 5185 2.220313 GACTCTAGTGTAGTAGGGCGG 58.780 57.143 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 3.054361 TCTCATTTTAGCCTCCCCTTCAC 60.054 47.826 0.00 0.00 0.00 3.18
19 20 2.092158 GCTCTCATTTTAGCCTCCCCTT 60.092 50.000 0.00 0.00 32.40 3.95
73 74 1.259840 ATGTTGCATGTCCAAGCCCC 61.260 55.000 0.00 0.00 0.00 5.80
79 80 2.792878 TCATGACATGTTGCATGTCCA 58.207 42.857 28.44 20.29 45.70 4.02
82 83 7.173032 AGGATATATCATGACATGTTGCATGT 58.827 34.615 20.82 13.74 41.88 3.21
116 166 6.298361 AGCACCAAAAAGCCTGAAATAAATT 58.702 32.000 0.00 0.00 0.00 1.82
156 206 2.544359 CAGTTGACGAACACGCCG 59.456 61.111 0.00 0.00 34.17 6.46
164 214 1.737735 CATGGCTCGCAGTTGACGA 60.738 57.895 0.00 0.00 38.02 4.20
165 215 1.568612 AACATGGCTCGCAGTTGACG 61.569 55.000 0.00 0.00 0.00 4.35
194 244 4.454847 GTCCGGTATATCTCGAGATTGACA 59.545 45.833 31.55 15.25 36.05 3.58
217 267 0.896019 ACACACCTCCGAGAGACTGG 60.896 60.000 0.00 0.00 0.00 4.00
219 269 1.340211 CCTACACACCTCCGAGAGACT 60.340 57.143 0.00 0.00 0.00 3.24
229 279 2.505407 TGCAAGCATATCCTACACACCT 59.495 45.455 0.00 0.00 0.00 4.00
235 285 1.466167 CCGCATGCAAGCATATCCTAC 59.534 52.381 19.57 0.00 34.91 3.18
236 286 1.072173 ACCGCATGCAAGCATATCCTA 59.928 47.619 19.57 0.00 34.91 2.94
238 288 0.670162 AACCGCATGCAAGCATATCC 59.330 50.000 19.57 0.00 34.91 2.59
239 289 3.837213 ATAACCGCATGCAAGCATATC 57.163 42.857 19.57 2.20 34.91 1.63
240 290 4.096833 CCATATAACCGCATGCAAGCATAT 59.903 41.667 19.57 11.49 34.91 1.78
241 291 3.439825 CCATATAACCGCATGCAAGCATA 59.560 43.478 19.57 9.70 34.91 3.14
242 292 2.229543 CCATATAACCGCATGCAAGCAT 59.770 45.455 19.57 0.86 37.08 3.79
244 294 1.879380 TCCATATAACCGCATGCAAGC 59.121 47.619 19.57 3.25 0.00 4.01
245 295 2.096268 CGTCCATATAACCGCATGCAAG 60.096 50.000 19.57 10.96 0.00 4.01
246 296 1.870402 CGTCCATATAACCGCATGCAA 59.130 47.619 19.57 0.00 0.00 4.08
247 297 1.069358 TCGTCCATATAACCGCATGCA 59.931 47.619 19.57 0.00 0.00 3.96
248 298 1.726791 CTCGTCCATATAACCGCATGC 59.273 52.381 7.91 7.91 0.00 4.06
249 299 2.731451 CACTCGTCCATATAACCGCATG 59.269 50.000 0.00 0.00 0.00 4.06
250 300 2.364324 ACACTCGTCCATATAACCGCAT 59.636 45.455 0.00 0.00 0.00 4.73
283 340 5.666462 TGTACATGCAGTTATATTGGACGT 58.334 37.500 0.00 0.00 0.00 4.34
291 348 8.261522 TGAAGTATGGTTGTACATGCAGTTATA 58.738 33.333 0.00 0.00 36.14 0.98
298 355 6.194796 ACATTGAAGTATGGTTGTACATGC 57.805 37.500 0.00 0.00 34.22 4.06
308 365 7.587037 ACCATGGATTAACATTGAAGTATGG 57.413 36.000 21.47 0.00 37.83 2.74
314 371 7.959658 ATGAGAACCATGGATTAACATTGAA 57.040 32.000 21.47 0.00 33.39 2.69
329 386 7.444183 CACCTTTCTACTTTACAATGAGAACCA 59.556 37.037 0.00 0.00 0.00 3.67
356 413 1.889829 CTATCGAGAGGCGGAGGAAAT 59.110 52.381 0.00 0.00 41.33 2.17
400 457 0.588252 CCAGTGTGCTCCAAAAGACG 59.412 55.000 0.00 0.00 0.00 4.18
411 468 1.080298 GGAAAGCATGCCAGTGTGC 60.080 57.895 15.66 0.00 41.57 4.57
421 478 1.153086 CCTAGCTGCCGGAAAGCAT 60.153 57.895 25.89 15.70 43.09 3.79
431 488 2.483491 GAGCTGCATAAATCCTAGCTGC 59.517 50.000 1.02 0.00 44.11 5.25
434 491 3.995705 CTGAGAGCTGCATAAATCCTAGC 59.004 47.826 1.02 0.00 34.71 3.42
457 514 2.161808 CCTCTGTACTGGTACACTGTCG 59.838 54.545 9.22 1.19 40.77 4.35
488 545 1.625818 ACCTAGGCCTCACAGACTTTG 59.374 52.381 9.68 0.00 0.00 2.77
491 548 1.261238 GCACCTAGGCCTCACAGACT 61.261 60.000 9.68 0.00 0.00 3.24
492 549 1.219393 GCACCTAGGCCTCACAGAC 59.781 63.158 9.68 0.00 0.00 3.51
493 550 0.618680 ATGCACCTAGGCCTCACAGA 60.619 55.000 9.68 0.00 0.00 3.41
494 551 0.463295 CATGCACCTAGGCCTCACAG 60.463 60.000 9.68 0.00 0.00 3.66
495 552 1.200760 ACATGCACCTAGGCCTCACA 61.201 55.000 9.68 1.36 0.00 3.58
496 553 0.745845 CACATGCACCTAGGCCTCAC 60.746 60.000 9.68 0.00 0.00 3.51
497 554 0.909133 TCACATGCACCTAGGCCTCA 60.909 55.000 9.68 0.00 0.00 3.86
526 587 9.320295 CCTAAATATATTCTGTCTTCCTCTCCT 57.680 37.037 0.00 0.00 0.00 3.69
558 619 2.816958 CTGCCGGCTACACTGCAG 60.817 66.667 29.70 13.48 44.43 4.41
562 623 4.715130 TCCCCTGCCGGCTACACT 62.715 66.667 29.70 0.00 0.00 3.55
564 625 2.265467 GAATTCCCCTGCCGGCTACA 62.265 60.000 29.70 6.34 0.00 2.74
565 626 1.526225 GAATTCCCCTGCCGGCTAC 60.526 63.158 29.70 0.00 0.00 3.58
566 627 1.352622 ATGAATTCCCCTGCCGGCTA 61.353 55.000 29.70 13.31 0.00 3.93
567 628 2.228841 AATGAATTCCCCTGCCGGCT 62.229 55.000 29.70 3.54 0.00 5.52
568 629 1.738346 GAATGAATTCCCCTGCCGGC 61.738 60.000 22.73 22.73 0.00 6.13
569 630 2.419057 GAATGAATTCCCCTGCCGG 58.581 57.895 2.27 0.00 0.00 6.13
592 653 0.821517 ATGGGATTAGCACGACGACA 59.178 50.000 0.00 0.00 0.00 4.35
598 659 3.440173 ACTTGAAACATGGGATTAGCACG 59.560 43.478 0.00 0.00 0.00 5.34
600 661 4.406456 ACACTTGAAACATGGGATTAGCA 58.594 39.130 0.00 0.00 0.00 3.49
655 720 7.277760 GCATATATCCGTATGACAACAAGCATA 59.722 37.037 0.00 0.00 34.67 3.14
656 721 6.092670 GCATATATCCGTATGACAACAAGCAT 59.907 38.462 0.00 0.00 34.67 3.79
668 738 5.823045 TGACTCGATGAGCATATATCCGTAT 59.177 40.000 0.00 0.00 32.04 3.06
687 757 4.452455 CCACACATACAACCTTTCTGACTC 59.548 45.833 0.00 0.00 0.00 3.36
742 816 2.539081 GGCCTCCAGAAGGGGTTGT 61.539 63.158 0.00 0.00 46.32 3.32
745 819 0.046397 ATTAGGCCTCCAGAAGGGGT 59.954 55.000 9.68 0.00 46.32 4.95
796 870 3.522731 CGCGGGAGACAGAGAGGG 61.523 72.222 0.00 0.00 0.00 4.30
797 871 2.438614 TCGCGGGAGACAGAGAGG 60.439 66.667 6.13 0.00 30.07 3.69
802 876 4.200283 GGCTCTCGCGGGAGACAG 62.200 72.222 39.08 19.01 44.28 3.51
829 905 2.266055 CACCGGGGAGAAGAGTGC 59.734 66.667 6.32 0.00 0.00 4.40
834 910 1.218316 GCTACACACCGGGGAGAAG 59.782 63.158 12.96 4.97 0.00 2.85
852 928 0.737367 ACGGACTGATGCACGATGTG 60.737 55.000 0.00 0.00 36.51 3.21
853 929 0.815095 TACGGACTGATGCACGATGT 59.185 50.000 0.00 0.00 0.00 3.06
854 930 1.200483 GTACGGACTGATGCACGATG 58.800 55.000 0.00 0.00 0.00 3.84
855 931 0.248498 CGTACGGACTGATGCACGAT 60.248 55.000 7.57 0.00 0.00 3.73
856 932 1.135939 CGTACGGACTGATGCACGA 59.864 57.895 7.57 0.00 0.00 4.35
857 933 2.505498 GCGTACGGACTGATGCACG 61.505 63.158 18.39 0.00 0.00 5.34
858 934 2.165301 GGCGTACGGACTGATGCAC 61.165 63.158 18.39 0.00 0.00 4.57
859 935 1.884075 AAGGCGTACGGACTGATGCA 61.884 55.000 18.39 0.00 30.64 3.96
860 936 1.153628 AAGGCGTACGGACTGATGC 60.154 57.895 18.39 0.00 30.64 3.91
861 937 0.172578 TCAAGGCGTACGGACTGATG 59.827 55.000 18.39 2.01 30.64 3.07
862 938 0.456221 CTCAAGGCGTACGGACTGAT 59.544 55.000 18.39 0.00 30.64 2.90
863 939 1.880894 CTCAAGGCGTACGGACTGA 59.119 57.895 18.39 1.47 30.64 3.41
864 940 1.805945 GCTCAAGGCGTACGGACTG 60.806 63.158 18.39 0.00 30.64 3.51
875 951 1.447489 CGTGGCTCAGAGCTCAAGG 60.447 63.158 21.99 9.87 41.99 3.61
893 969 3.859961 CGTGTGACAGTGTGATAATCTCC 59.140 47.826 0.00 0.00 0.00 3.71
916 996 2.629002 CTTGGCAAGCTACGTGGTT 58.371 52.632 15.25 0.00 36.75 3.67
945 1025 4.316025 AGCTTCCTCCCTATCTAGCTAG 57.684 50.000 15.01 15.01 37.21 3.42
1138 1226 1.133407 GACGAAGGAGTAGCTGGTGAG 59.867 57.143 0.00 0.00 0.00 3.51
1161 1249 4.057428 GTCGTCTGGTCGCTGGCT 62.057 66.667 0.00 0.00 0.00 4.75
1195 1283 1.953138 CGATGATGCCGCCTGACTC 60.953 63.158 0.00 0.00 0.00 3.36
1200 1288 4.241555 GGGACGATGATGCCGCCT 62.242 66.667 0.00 0.00 0.00 5.52
1228 1316 1.646189 GCGAGGAACTTGAGGATGAC 58.354 55.000 0.00 0.00 44.22 3.06
1266 1354 1.741770 GGCGACGCTGATCACCTTT 60.742 57.895 20.77 0.00 0.00 3.11
1388 1476 5.794687 ATAATCAATACGTGTGTGGTGTG 57.205 39.130 0.00 0.00 0.00 3.82
1389 1477 6.607689 CAAATAATCAATACGTGTGTGGTGT 58.392 36.000 0.00 0.00 0.00 4.16
1390 1478 5.511377 GCAAATAATCAATACGTGTGTGGTG 59.489 40.000 0.00 0.00 0.00 4.17
1391 1479 5.182190 TGCAAATAATCAATACGTGTGTGGT 59.818 36.000 0.00 0.00 0.00 4.16
1392 1480 5.511377 GTGCAAATAATCAATACGTGTGTGG 59.489 40.000 0.00 0.00 0.00 4.17
1407 1495 5.859521 ACGTACGTATTTGGTGCAAATAA 57.140 34.783 21.41 0.00 44.45 1.40
1424 1512 9.984919 CTTAATTTCTTATATGCACGTACGTAC 57.015 33.333 22.34 16.78 0.00 3.67
1430 1518 9.337396 TGGATTCTTAATTTCTTATATGCACGT 57.663 29.630 0.00 0.00 0.00 4.49
1432 1520 9.899226 GGTGGATTCTTAATTTCTTATATGCAC 57.101 33.333 0.00 0.00 0.00 4.57
1439 1527 9.973661 TGATCAAGGTGGATTCTTAATTTCTTA 57.026 29.630 0.00 0.00 0.00 2.10
1440 1528 8.884124 TGATCAAGGTGGATTCTTAATTTCTT 57.116 30.769 0.00 0.00 0.00 2.52
1441 1529 9.484806 AATGATCAAGGTGGATTCTTAATTTCT 57.515 29.630 0.00 0.00 0.00 2.52
1480 1568 9.498307 CATTTTGAAGTTTAACACGAGTTAACT 57.502 29.630 16.28 8.13 46.72 2.24
1489 1578 6.156748 ACCCCTCATTTTGAAGTTTAACAC 57.843 37.500 0.00 0.00 0.00 3.32
1523 1613 1.683385 TCATCCTCTGAGCGGTATGTG 59.317 52.381 0.00 0.00 0.00 3.21
1585 1862 6.966021 TGTTGGTTCACTAGATTTTACTTGC 58.034 36.000 0.00 0.00 0.00 4.01
1596 1873 7.596494 ACATCATCAATTTGTTGGTTCACTAG 58.404 34.615 7.44 0.00 0.00 2.57
1616 1893 9.995957 CACCATATGAACGTTTAATAAACATCA 57.004 29.630 17.72 17.72 41.44 3.07
1641 1918 4.102367 TCCCGGTTCATATGATGTCATTCA 59.898 41.667 6.17 0.00 37.76 2.57
1764 2041 3.068691 TTCAGCTCCGTCCTCCCG 61.069 66.667 0.00 0.00 0.00 5.14
1813 2090 3.744719 CTGCAGCTGCCGCATGTT 61.745 61.111 34.64 0.00 39.02 2.71
1839 2116 1.841663 CTTCGCCAAAGACCACCGTG 61.842 60.000 0.00 0.00 37.12 4.94
1903 2180 0.038159 ACGAGGTACTGCTGCTGAAC 60.038 55.000 13.69 2.16 41.55 3.18
1905 2182 1.595993 GGACGAGGTACTGCTGCTGA 61.596 60.000 13.69 0.00 41.55 4.26
1959 2236 6.400409 CGTTCTCAATATATGCATGGTTCTCG 60.400 42.308 10.16 0.00 0.00 4.04
1968 2245 5.017294 TGACCACGTTCTCAATATATGCA 57.983 39.130 0.00 0.00 0.00 3.96
2023 2300 6.095377 GCAGAAATGGACTTTCGATCATTTT 58.905 36.000 0.00 0.69 46.53 1.82
2024 2301 5.183713 TGCAGAAATGGACTTTCGATCATTT 59.816 36.000 0.00 0.00 46.53 2.32
2025 2302 4.701651 TGCAGAAATGGACTTTCGATCATT 59.298 37.500 0.00 0.00 46.53 2.57
2026 2303 4.095483 GTGCAGAAATGGACTTTCGATCAT 59.905 41.667 0.00 0.00 46.53 2.45
2027 2304 3.436704 GTGCAGAAATGGACTTTCGATCA 59.563 43.478 0.00 0.00 46.53 2.92
2028 2305 3.181506 GGTGCAGAAATGGACTTTCGATC 60.182 47.826 0.00 0.00 46.53 3.69
2029 2306 2.749621 GGTGCAGAAATGGACTTTCGAT 59.250 45.455 0.00 0.00 46.53 3.59
2030 2307 2.151202 GGTGCAGAAATGGACTTTCGA 58.849 47.619 0.00 0.00 46.53 3.71
2031 2308 1.200020 GGGTGCAGAAATGGACTTTCG 59.800 52.381 0.00 0.00 46.53 3.46
2032 2309 1.200020 CGGGTGCAGAAATGGACTTTC 59.800 52.381 0.00 0.00 43.07 2.62
2033 2310 1.202879 TCGGGTGCAGAAATGGACTTT 60.203 47.619 0.00 0.00 0.00 2.66
2034 2311 0.400213 TCGGGTGCAGAAATGGACTT 59.600 50.000 0.00 0.00 0.00 3.01
2035 2312 0.036010 CTCGGGTGCAGAAATGGACT 60.036 55.000 0.00 0.00 0.00 3.85
2036 2313 1.648467 GCTCGGGTGCAGAAATGGAC 61.648 60.000 0.00 0.00 0.00 4.02
2037 2314 1.377202 GCTCGGGTGCAGAAATGGA 60.377 57.895 0.00 0.00 0.00 3.41
2038 2315 1.372087 GAGCTCGGGTGCAGAAATGG 61.372 60.000 0.00 0.00 34.99 3.16
2039 2316 1.699656 CGAGCTCGGGTGCAGAAATG 61.700 60.000 28.40 0.00 35.37 2.32
2040 2317 1.448540 CGAGCTCGGGTGCAGAAAT 60.449 57.895 28.40 0.00 35.37 2.17
2041 2318 2.048222 CGAGCTCGGGTGCAGAAA 60.048 61.111 28.40 0.00 35.37 2.52
2042 2319 3.282745 GACGAGCTCGGGTGCAGAA 62.283 63.158 36.93 0.00 44.95 3.02
2043 2320 2.814913 TAGACGAGCTCGGGTGCAGA 62.815 60.000 36.93 14.00 44.95 4.26
2044 2321 2.407428 TAGACGAGCTCGGGTGCAG 61.407 63.158 36.93 10.92 44.95 4.41
2045 2322 2.360726 TAGACGAGCTCGGGTGCA 60.361 61.111 36.93 16.24 44.95 4.57
2046 2323 2.102553 GTAGACGAGCTCGGGTGC 59.897 66.667 36.93 23.51 44.95 5.01
2047 2324 1.136984 GTGTAGACGAGCTCGGGTG 59.863 63.158 36.93 12.82 44.95 4.61
2048 2325 2.045131 GGTGTAGACGAGCTCGGGT 61.045 63.158 36.93 25.90 44.95 5.28
2049 2326 2.772691 GGGTGTAGACGAGCTCGGG 61.773 68.421 36.93 13.97 44.95 5.14
2050 2327 2.044555 TGGGTGTAGACGAGCTCGG 61.045 63.158 36.93 20.54 44.95 4.63
2051 2328 1.136984 GTGGGTGTAGACGAGCTCG 59.863 63.158 33.45 33.45 46.33 5.03
2052 2329 0.818296 ATGTGGGTGTAGACGAGCTC 59.182 55.000 2.73 2.73 0.00 4.09
2053 2330 1.066858 CAATGTGGGTGTAGACGAGCT 60.067 52.381 0.00 0.00 0.00 4.09
2054 2331 1.067142 TCAATGTGGGTGTAGACGAGC 60.067 52.381 0.00 0.00 0.00 5.03
2055 2332 2.607187 GTCAATGTGGGTGTAGACGAG 58.393 52.381 0.00 0.00 0.00 4.18
2056 2333 2.736144 GTCAATGTGGGTGTAGACGA 57.264 50.000 0.00 0.00 0.00 4.20
2057 2334 1.346365 CGTCAATGTGGGTGTAGACG 58.654 55.000 0.00 0.00 42.00 4.18
2058 2335 2.736144 TCGTCAATGTGGGTGTAGAC 57.264 50.000 0.00 0.00 0.00 2.59
2059 2336 3.755112 TTTCGTCAATGTGGGTGTAGA 57.245 42.857 0.00 0.00 0.00 2.59
2060 2337 4.822036 TTTTTCGTCAATGTGGGTGTAG 57.178 40.909 0.00 0.00 0.00 2.74
2124 2401 5.250235 TCAAATTGTCTACCGCACAAAAA 57.750 34.783 0.00 0.00 37.30 1.94
2125 2402 4.902443 TCAAATTGTCTACCGCACAAAA 57.098 36.364 0.00 0.00 37.30 2.44
2126 2403 4.793071 CATCAAATTGTCTACCGCACAAA 58.207 39.130 0.00 0.00 37.30 2.83
2127 2404 3.365868 GCATCAAATTGTCTACCGCACAA 60.366 43.478 0.00 0.00 38.12 3.33
2128 2405 2.161410 GCATCAAATTGTCTACCGCACA 59.839 45.455 0.00 0.00 0.00 4.57
2129 2406 2.785679 GCATCAAATTGTCTACCGCAC 58.214 47.619 0.00 0.00 0.00 5.34
2130 2407 1.396648 CGCATCAAATTGTCTACCGCA 59.603 47.619 0.00 0.00 0.00 5.69
2131 2408 1.396996 ACGCATCAAATTGTCTACCGC 59.603 47.619 0.00 0.00 0.00 5.68
2132 2409 2.670905 TCACGCATCAAATTGTCTACCG 59.329 45.455 0.00 0.00 0.00 4.02
2133 2410 3.063997 CCTCACGCATCAAATTGTCTACC 59.936 47.826 0.00 0.00 0.00 3.18
2134 2411 3.932710 TCCTCACGCATCAAATTGTCTAC 59.067 43.478 0.00 0.00 0.00 2.59
2135 2412 3.932710 GTCCTCACGCATCAAATTGTCTA 59.067 43.478 0.00 0.00 0.00 2.59
2136 2413 2.744202 GTCCTCACGCATCAAATTGTCT 59.256 45.455 0.00 0.00 0.00 3.41
2137 2414 2.744202 AGTCCTCACGCATCAAATTGTC 59.256 45.455 0.00 0.00 0.00 3.18
2138 2415 2.783135 AGTCCTCACGCATCAAATTGT 58.217 42.857 0.00 0.00 0.00 2.71
2139 2416 3.935203 AGTAGTCCTCACGCATCAAATTG 59.065 43.478 0.00 0.00 0.00 2.32
2140 2417 4.184629 GAGTAGTCCTCACGCATCAAATT 58.815 43.478 0.00 0.00 40.17 1.82
2141 2418 3.430929 GGAGTAGTCCTCACGCATCAAAT 60.431 47.826 9.55 0.00 42.40 2.32
2142 2419 2.094182 GGAGTAGTCCTCACGCATCAAA 60.094 50.000 9.55 0.00 42.40 2.69
2143 2420 1.476891 GGAGTAGTCCTCACGCATCAA 59.523 52.381 9.55 0.00 42.40 2.57
2144 2421 1.103803 GGAGTAGTCCTCACGCATCA 58.896 55.000 9.55 0.00 42.40 3.07
2145 2422 1.103803 TGGAGTAGTCCTCACGCATC 58.896 55.000 17.62 0.00 44.30 3.91
2146 2423 1.557099 TTGGAGTAGTCCTCACGCAT 58.443 50.000 17.62 0.00 44.30 4.73
2147 2424 1.557099 ATTGGAGTAGTCCTCACGCA 58.443 50.000 17.62 0.00 44.30 5.24
2148 2425 2.674796 AATTGGAGTAGTCCTCACGC 57.325 50.000 17.62 0.00 44.30 5.34
2149 2426 7.429636 TTTAAAAATTGGAGTAGTCCTCACG 57.570 36.000 17.62 0.00 44.30 4.35
2150 2427 9.010029 TGATTTAAAAATTGGAGTAGTCCTCAC 57.990 33.333 17.62 0.00 44.30 3.51
2151 2428 9.753674 ATGATTTAAAAATTGGAGTAGTCCTCA 57.246 29.630 17.62 8.88 44.30 3.86
2168 2445 8.246180 GCTTCTCAGATGTCCAAATGATTTAAA 58.754 33.333 0.00 0.00 0.00 1.52
2169 2446 7.613022 AGCTTCTCAGATGTCCAAATGATTTAA 59.387 33.333 0.00 0.00 0.00 1.52
2170 2447 7.114754 AGCTTCTCAGATGTCCAAATGATTTA 58.885 34.615 0.00 0.00 0.00 1.40
2171 2448 5.950549 AGCTTCTCAGATGTCCAAATGATTT 59.049 36.000 0.00 0.00 0.00 2.17
2172 2449 5.507637 AGCTTCTCAGATGTCCAAATGATT 58.492 37.500 0.00 0.00 0.00 2.57
2173 2450 5.104444 AGAGCTTCTCAGATGTCCAAATGAT 60.104 40.000 0.00 0.00 32.06 2.45
2174 2451 4.224594 AGAGCTTCTCAGATGTCCAAATGA 59.775 41.667 0.00 0.00 32.06 2.57
2175 2452 4.515361 AGAGCTTCTCAGATGTCCAAATG 58.485 43.478 0.00 0.00 32.06 2.32
2176 2453 4.768583 GAGAGCTTCTCAGATGTCCAAAT 58.231 43.478 7.93 0.00 42.90 2.32
2177 2454 4.199432 GAGAGCTTCTCAGATGTCCAAA 57.801 45.455 7.93 0.00 42.90 3.28
2178 2455 3.883830 GAGAGCTTCTCAGATGTCCAA 57.116 47.619 7.93 0.00 42.90 3.53
2203 2480 8.499288 TTTATAGACCCCCAATTTGTCTTTTT 57.501 30.769 0.00 0.00 39.84 1.94
2204 2481 8.499288 TTTTATAGACCCCCAATTTGTCTTTT 57.501 30.769 0.00 0.00 39.84 2.27
2205 2482 8.499288 TTTTTATAGACCCCCAATTTGTCTTT 57.501 30.769 0.00 0.00 39.84 2.52
2206 2483 8.539544 CATTTTTATAGACCCCCAATTTGTCTT 58.460 33.333 0.00 0.00 39.84 3.01
2207 2484 7.678171 ACATTTTTATAGACCCCCAATTTGTCT 59.322 33.333 0.00 0.00 41.88 3.41
2208 2485 7.847096 ACATTTTTATAGACCCCCAATTTGTC 58.153 34.615 0.00 0.00 0.00 3.18
2209 2486 7.806680 ACATTTTTATAGACCCCCAATTTGT 57.193 32.000 0.00 0.00 0.00 2.83
2214 2491 9.327731 ACAATAAACATTTTTATAGACCCCCAA 57.672 29.630 0.00 0.00 36.98 4.12
2215 2492 8.903059 ACAATAAACATTTTTATAGACCCCCA 57.097 30.769 0.00 0.00 36.98 4.96
2230 2507 9.528018 CCAAAACAGTACAGAAACAATAAACAT 57.472 29.630 0.00 0.00 0.00 2.71
2231 2508 8.524487 ACCAAAACAGTACAGAAACAATAAACA 58.476 29.630 0.00 0.00 0.00 2.83
2232 2509 8.920509 ACCAAAACAGTACAGAAACAATAAAC 57.079 30.769 0.00 0.00 0.00 2.01
2233 2510 9.575783 GAACCAAAACAGTACAGAAACAATAAA 57.424 29.630 0.00 0.00 0.00 1.40
2234 2511 7.911205 CGAACCAAAACAGTACAGAAACAATAA 59.089 33.333 0.00 0.00 0.00 1.40
2235 2512 7.280428 TCGAACCAAAACAGTACAGAAACAATA 59.720 33.333 0.00 0.00 0.00 1.90
2236 2513 6.094325 TCGAACCAAAACAGTACAGAAACAAT 59.906 34.615 0.00 0.00 0.00 2.71
2237 2514 5.411977 TCGAACCAAAACAGTACAGAAACAA 59.588 36.000 0.00 0.00 0.00 2.83
2238 2515 4.936411 TCGAACCAAAACAGTACAGAAACA 59.064 37.500 0.00 0.00 0.00 2.83
2239 2516 5.473796 TCGAACCAAAACAGTACAGAAAC 57.526 39.130 0.00 0.00 0.00 2.78
2240 2517 6.687081 AATCGAACCAAAACAGTACAGAAA 57.313 33.333 0.00 0.00 0.00 2.52
2241 2518 6.094325 ACAAATCGAACCAAAACAGTACAGAA 59.906 34.615 0.00 0.00 0.00 3.02
2242 2519 5.587043 ACAAATCGAACCAAAACAGTACAGA 59.413 36.000 0.00 0.00 0.00 3.41
2243 2520 5.816919 ACAAATCGAACCAAAACAGTACAG 58.183 37.500 0.00 0.00 0.00 2.74
2244 2521 5.587043 AGACAAATCGAACCAAAACAGTACA 59.413 36.000 0.00 0.00 0.00 2.90
2245 2522 6.056428 AGACAAATCGAACCAAAACAGTAC 57.944 37.500 0.00 0.00 0.00 2.73
2246 2523 6.687081 AAGACAAATCGAACCAAAACAGTA 57.313 33.333 0.00 0.00 0.00 2.74
2247 2524 5.576447 AAGACAAATCGAACCAAAACAGT 57.424 34.783 0.00 0.00 0.00 3.55
2248 2525 6.885735 AAAAGACAAATCGAACCAAAACAG 57.114 33.333 0.00 0.00 0.00 3.16
2276 2553 8.432006 GTCATTTGGACTTTTGAGTAGCTCTCA 61.432 40.741 10.62 10.62 45.46 3.27
2277 2554 5.934625 TCATTTGGACTTTTGAGTAGCTCTC 59.065 40.000 0.00 0.00 43.03 3.20
2278 2555 5.703130 GTCATTTGGACTTTTGAGTAGCTCT 59.297 40.000 0.00 0.00 43.46 4.09
2279 2556 5.932661 GTCATTTGGACTTTTGAGTAGCTC 58.067 41.667 0.00 0.00 43.46 4.09
2280 2557 5.948992 GTCATTTGGACTTTTGAGTAGCT 57.051 39.130 0.00 0.00 43.46 3.32
2293 2570 6.580788 TGCTTCAAATTTCAAGTCATTTGGA 58.419 32.000 3.65 0.00 39.76 3.53
2294 2571 6.073440 CCTGCTTCAAATTTCAAGTCATTTGG 60.073 38.462 3.65 0.00 39.76 3.28
2295 2572 6.565247 GCCTGCTTCAAATTTCAAGTCATTTG 60.565 38.462 3.65 0.00 40.39 2.32
2296 2573 5.467735 GCCTGCTTCAAATTTCAAGTCATTT 59.532 36.000 3.65 0.00 0.00 2.32
2297 2574 4.992951 GCCTGCTTCAAATTTCAAGTCATT 59.007 37.500 3.65 0.00 0.00 2.57
2298 2575 4.562143 GGCCTGCTTCAAATTTCAAGTCAT 60.562 41.667 3.65 0.00 0.00 3.06
2299 2576 3.243839 GGCCTGCTTCAAATTTCAAGTCA 60.244 43.478 3.65 1.96 0.00 3.41
2300 2577 3.006217 AGGCCTGCTTCAAATTTCAAGTC 59.994 43.478 3.11 0.00 0.00 3.01
2301 2578 2.967887 AGGCCTGCTTCAAATTTCAAGT 59.032 40.909 3.11 0.00 0.00 3.16
2302 2579 3.006110 TGAGGCCTGCTTCAAATTTCAAG 59.994 43.478 12.00 0.00 0.00 3.02
2303 2580 2.964464 TGAGGCCTGCTTCAAATTTCAA 59.036 40.909 12.00 0.00 0.00 2.69
2304 2581 2.297033 GTGAGGCCTGCTTCAAATTTCA 59.703 45.455 12.00 0.00 33.88 2.69
2305 2582 2.669391 CGTGAGGCCTGCTTCAAATTTC 60.669 50.000 12.00 0.00 33.88 2.17
2306 2583 1.270550 CGTGAGGCCTGCTTCAAATTT 59.729 47.619 12.00 0.00 33.88 1.82
2307 2584 0.883833 CGTGAGGCCTGCTTCAAATT 59.116 50.000 12.00 0.00 33.88 1.82
2308 2585 1.589716 GCGTGAGGCCTGCTTCAAAT 61.590 55.000 12.00 0.00 33.88 2.32
2309 2586 2.260869 GCGTGAGGCCTGCTTCAAA 61.261 57.895 12.00 0.00 33.88 2.69
2310 2587 2.669569 GCGTGAGGCCTGCTTCAA 60.670 61.111 12.00 0.00 33.88 2.69
2311 2588 3.258228 ATGCGTGAGGCCTGCTTCA 62.258 57.895 12.00 0.00 42.61 3.02
2312 2589 2.437359 ATGCGTGAGGCCTGCTTC 60.437 61.111 12.00 0.00 42.61 3.86
2313 2590 2.437359 GATGCGTGAGGCCTGCTT 60.437 61.111 12.00 5.68 42.61 3.91
2314 2591 3.258228 TTGATGCGTGAGGCCTGCT 62.258 57.895 12.00 0.00 42.61 4.24
2315 2592 2.747460 TTGATGCGTGAGGCCTGC 60.747 61.111 12.00 8.68 42.61 4.85
2316 2593 0.957395 AACTTGATGCGTGAGGCCTG 60.957 55.000 12.00 0.00 42.61 4.85
2317 2594 0.957395 CAACTTGATGCGTGAGGCCT 60.957 55.000 3.86 3.86 42.61 5.19
2318 2595 1.237285 ACAACTTGATGCGTGAGGCC 61.237 55.000 0.00 0.00 42.61 5.19
2319 2596 0.166814 GACAACTTGATGCGTGAGGC 59.833 55.000 0.00 0.00 43.96 4.70
2320 2597 1.800805 AGACAACTTGATGCGTGAGG 58.199 50.000 0.00 0.00 0.00 3.86
2321 2598 2.668457 GGTAGACAACTTGATGCGTGAG 59.332 50.000 0.00 0.00 0.00 3.51
2322 2599 2.683968 GGTAGACAACTTGATGCGTGA 58.316 47.619 0.00 0.00 0.00 4.35
2323 2600 1.390123 CGGTAGACAACTTGATGCGTG 59.610 52.381 0.00 0.00 0.00 5.34
2324 2601 1.710013 CGGTAGACAACTTGATGCGT 58.290 50.000 0.00 0.00 0.00 5.24
2325 2602 0.370273 GCGGTAGACAACTTGATGCG 59.630 55.000 0.00 0.00 0.00 4.73
2326 2603 1.128692 GTGCGGTAGACAACTTGATGC 59.871 52.381 0.00 0.00 0.00 3.91
2327 2604 2.412870 TGTGCGGTAGACAACTTGATG 58.587 47.619 0.00 0.00 0.00 3.07
2328 2605 2.831685 TGTGCGGTAGACAACTTGAT 57.168 45.000 0.00 0.00 0.00 2.57
2329 2606 2.605837 TTGTGCGGTAGACAACTTGA 57.394 45.000 0.00 0.00 0.00 3.02
2330 2607 3.684103 TTTTGTGCGGTAGACAACTTG 57.316 42.857 0.00 0.00 33.06 3.16
2381 2658 6.073112 CCCGGTTAGACAAGAATTCGTAAAAA 60.073 38.462 0.00 0.00 0.00 1.94
2382 2659 5.409214 CCCGGTTAGACAAGAATTCGTAAAA 59.591 40.000 0.00 0.00 0.00 1.52
2383 2660 4.931002 CCCGGTTAGACAAGAATTCGTAAA 59.069 41.667 0.00 0.00 0.00 2.01
2384 2661 4.021192 ACCCGGTTAGACAAGAATTCGTAA 60.021 41.667 0.00 0.00 0.00 3.18
2385 2662 3.511146 ACCCGGTTAGACAAGAATTCGTA 59.489 43.478 0.00 0.00 0.00 3.43
2386 2663 2.301009 ACCCGGTTAGACAAGAATTCGT 59.699 45.455 0.00 0.00 0.00 3.85
2387 2664 2.671396 CACCCGGTTAGACAAGAATTCG 59.329 50.000 0.00 0.00 0.00 3.34
2388 2665 2.418976 GCACCCGGTTAGACAAGAATTC 59.581 50.000 0.00 0.00 0.00 2.17
2389 2666 2.224670 TGCACCCGGTTAGACAAGAATT 60.225 45.455 0.00 0.00 0.00 2.17
2390 2667 1.349688 TGCACCCGGTTAGACAAGAAT 59.650 47.619 0.00 0.00 0.00 2.40
2391 2668 0.759959 TGCACCCGGTTAGACAAGAA 59.240 50.000 0.00 0.00 0.00 2.52
2392 2669 0.320374 CTGCACCCGGTTAGACAAGA 59.680 55.000 0.00 0.00 0.00 3.02
2393 2670 0.320374 TCTGCACCCGGTTAGACAAG 59.680 55.000 0.00 0.00 0.00 3.16
2394 2671 0.981183 ATCTGCACCCGGTTAGACAA 59.019 50.000 0.00 0.00 0.00 3.18
2395 2672 0.249120 CATCTGCACCCGGTTAGACA 59.751 55.000 0.00 0.00 0.00 3.41
2396 2673 0.535335 TCATCTGCACCCGGTTAGAC 59.465 55.000 0.00 0.00 0.00 2.59
2397 2674 0.824109 CTCATCTGCACCCGGTTAGA 59.176 55.000 0.00 4.22 0.00 2.10
2398 2675 0.811616 GCTCATCTGCACCCGGTTAG 60.812 60.000 0.00 0.00 0.00 2.34
2399 2676 1.220749 GCTCATCTGCACCCGGTTA 59.779 57.895 0.00 0.00 0.00 2.85
2400 2677 2.045926 GCTCATCTGCACCCGGTT 60.046 61.111 0.00 0.00 0.00 4.44
2401 2678 1.264749 TAAGCTCATCTGCACCCGGT 61.265 55.000 0.00 0.00 34.99 5.28
2402 2679 0.811616 GTAAGCTCATCTGCACCCGG 60.812 60.000 0.00 0.00 34.99 5.73
2403 2680 0.176680 AGTAAGCTCATCTGCACCCG 59.823 55.000 0.00 0.00 34.99 5.28
2404 2681 1.208052 TGAGTAAGCTCATCTGCACCC 59.792 52.381 0.00 0.00 45.94 4.61
2405 2682 2.680312 TGAGTAAGCTCATCTGCACC 57.320 50.000 0.00 0.00 45.94 5.01
2414 2691 3.993081 CGGGATCATTCATGAGTAAGCTC 59.007 47.826 0.00 0.00 40.64 4.09
2415 2692 3.389329 ACGGGATCATTCATGAGTAAGCT 59.611 43.478 0.00 0.00 40.64 3.74
2416 2693 3.733337 ACGGGATCATTCATGAGTAAGC 58.267 45.455 0.00 0.00 40.64 3.09
2417 2694 9.658799 ATTATTACGGGATCATTCATGAGTAAG 57.341 33.333 0.00 0.00 40.64 2.34
2418 2695 9.653287 GATTATTACGGGATCATTCATGAGTAA 57.347 33.333 0.00 0.00 40.64 2.24
2419 2696 8.811994 TGATTATTACGGGATCATTCATGAGTA 58.188 33.333 0.00 0.00 40.64 2.59
2420 2697 7.679783 TGATTATTACGGGATCATTCATGAGT 58.320 34.615 0.00 0.00 40.64 3.41
2421 2698 8.037166 TCTGATTATTACGGGATCATTCATGAG 58.963 37.037 0.00 0.00 40.64 2.90
2422 2699 7.906327 TCTGATTATTACGGGATCATTCATGA 58.094 34.615 0.00 0.00 41.70 3.07
2423 2700 8.552083 TTCTGATTATTACGGGATCATTCATG 57.448 34.615 0.00 0.00 0.00 3.07
2424 2701 9.573166 TTTTCTGATTATTACGGGATCATTCAT 57.427 29.630 0.00 0.00 0.00 2.57
2425 2702 8.972458 TTTTCTGATTATTACGGGATCATTCA 57.028 30.769 0.00 0.00 0.00 2.57
2443 2720 6.027131 CACGACTGTTTGTTCATTTTTCTGA 58.973 36.000 0.00 0.00 0.00 3.27
2444 2721 5.275881 GCACGACTGTTTGTTCATTTTTCTG 60.276 40.000 0.00 0.00 0.00 3.02
2445 2722 4.798387 GCACGACTGTTTGTTCATTTTTCT 59.202 37.500 0.00 0.00 0.00 2.52
2450 2727 3.988379 ATGCACGACTGTTTGTTCATT 57.012 38.095 0.00 0.00 0.00 2.57
2613 2891 7.553881 AAGACCGGATGTTTATTATGTTCAG 57.446 36.000 9.46 0.00 0.00 3.02
2728 3006 1.745653 GGCATAAAACACTGGAGGAGC 59.254 52.381 0.00 0.00 0.00 4.70
2751 3029 7.063544 AGCGACTGAAAAACTGTTATGAGATAC 59.936 37.037 0.00 0.00 0.00 2.24
2806 3091 6.217294 TCATCACGACACACACAAAGTTATA 58.783 36.000 0.00 0.00 0.00 0.98
2824 3109 5.630680 ACGAAATTGAACTGCAAATCATCAC 59.369 36.000 2.25 0.00 40.48 3.06
2877 3162 6.991485 AAATTGTAGATCGTGTTTTTGCTG 57.009 33.333 0.00 0.00 0.00 4.41
2940 3226 3.058777 TCGGACAAGTATTTTCAAACGGC 60.059 43.478 0.00 0.00 0.00 5.68
2946 3232 6.234920 TCCATTTCTCGGACAAGTATTTTCA 58.765 36.000 0.00 0.00 0.00 2.69
2960 3246 8.315391 TCTATTTTAGATGCATCCATTTCTCG 57.685 34.615 23.06 6.39 0.00 4.04
3211 3497 0.179936 CCTCATTCACCTCCTGGAGC 59.820 60.000 18.51 0.00 37.04 4.70
3214 3500 1.871418 TCTCCTCATTCACCTCCTGG 58.129 55.000 0.00 0.00 39.83 4.45
3222 3508 1.406069 GCTCGGCTTTCTCCTCATTCA 60.406 52.381 0.00 0.00 0.00 2.57
3224 3510 0.460987 CGCTCGGCTTTCTCCTCATT 60.461 55.000 0.00 0.00 0.00 2.57
3226 3512 2.573869 CGCTCGGCTTTCTCCTCA 59.426 61.111 0.00 0.00 0.00 3.86
3228 3514 4.803426 CGCGCTCGGCTTTCTCCT 62.803 66.667 5.56 0.00 40.44 3.69
3490 3776 3.366679 CGCTTAGGAAGTCCACGAAGTTA 60.367 47.826 0.00 0.00 41.61 2.24
3493 3779 1.630148 CGCTTAGGAAGTCCACGAAG 58.370 55.000 0.00 1.79 38.89 3.79
3499 3785 2.890961 GCGGCGCTTAGGAAGTCC 60.891 66.667 26.86 0.00 0.00 3.85
3629 3915 2.157305 TTGCCGTCGTACCATCCGTT 62.157 55.000 0.00 0.00 0.00 4.44
3634 3920 0.390735 GTTCCTTGCCGTCGTACCAT 60.391 55.000 0.00 0.00 0.00 3.55
3664 3950 2.120940 TAGTTGGGGTCGGGCTCA 59.879 61.111 0.00 0.00 0.00 4.26
3701 3987 0.447801 GCGTTGCCATACTTGGACAG 59.552 55.000 0.00 0.00 46.92 3.51
3787 4073 2.745152 GCAACGGTATAACAGGGAGCAT 60.745 50.000 0.00 0.00 0.00 3.79
3788 4074 1.406341 GCAACGGTATAACAGGGAGCA 60.406 52.381 0.00 0.00 0.00 4.26
3789 4075 1.296727 GCAACGGTATAACAGGGAGC 58.703 55.000 0.00 0.00 0.00 4.70
3838 4124 2.817834 TAATCGCGTGGGCTGTGC 60.818 61.111 5.77 0.00 36.88 4.57
3889 4175 5.220586 CCGATCGCTGTCTTAAATTTGCTTA 60.221 40.000 10.32 0.00 0.00 3.09
3914 4202 1.821332 CCCTCATCTTTCCAGCCGC 60.821 63.158 0.00 0.00 0.00 6.53
3979 4267 2.186160 TTGCACACACAAGAGGCCG 61.186 57.895 0.00 0.00 0.00 6.13
4005 4295 7.786178 TGGTATTATTCAGACAATAGTGCAC 57.214 36.000 9.40 9.40 0.00 4.57
4006 4296 7.445096 CCATGGTATTATTCAGACAATAGTGCA 59.555 37.037 2.57 0.00 0.00 4.57
4007 4297 7.094634 CCCATGGTATTATTCAGACAATAGTGC 60.095 40.741 11.73 0.00 0.00 4.40
4008 4298 7.939039 ACCCATGGTATTATTCAGACAATAGTG 59.061 37.037 11.73 0.00 32.11 2.74
4009 4299 7.939039 CACCCATGGTATTATTCAGACAATAGT 59.061 37.037 11.73 0.00 32.11 2.12
4010 4300 8.156820 TCACCCATGGTATTATTCAGACAATAG 58.843 37.037 11.73 0.00 32.11 1.73
4011 4301 8.040002 TCACCCATGGTATTATTCAGACAATA 57.960 34.615 11.73 0.00 32.11 1.90
4012 4302 6.910191 TCACCCATGGTATTATTCAGACAAT 58.090 36.000 11.73 0.00 32.11 2.71
4013 4303 6.069673 ACTCACCCATGGTATTATTCAGACAA 60.070 38.462 11.73 0.00 32.11 3.18
4014 4304 5.428457 ACTCACCCATGGTATTATTCAGACA 59.572 40.000 11.73 0.00 32.11 3.41
4015 4305 5.760253 CACTCACCCATGGTATTATTCAGAC 59.240 44.000 11.73 0.00 32.11 3.51
4035 4325 0.669625 GGTCACAGCGGGTTACACTC 60.670 60.000 0.00 0.00 0.00 3.51
4044 4334 4.883083 ACATATATTAGTGGTCACAGCGG 58.117 43.478 3.82 0.00 0.00 5.52
4045 4335 5.631096 CAGACATATATTAGTGGTCACAGCG 59.369 44.000 3.82 0.00 0.00 5.18
4094 4384 8.262715 TGAACATATTTTGCGAGAGAATACAA 57.737 30.769 0.00 0.00 0.00 2.41
4205 4498 6.975197 TCAATTTACAATTTTGCTTGTCGACA 59.025 30.769 15.76 15.76 39.88 4.35
4206 4499 7.167468 ACTCAATTTACAATTTTGCTTGTCGAC 59.833 33.333 9.11 9.11 39.88 4.20
4208 4501 7.393551 ACTCAATTTACAATTTTGCTTGTCG 57.606 32.000 0.00 0.00 39.88 4.35
4209 4502 8.063630 CCAACTCAATTTACAATTTTGCTTGTC 58.936 33.333 0.00 0.00 39.88 3.18
4233 4537 1.204146 GGGTCTCATGTTCTAGCCCA 58.796 55.000 0.00 0.00 34.95 5.36
4250 4554 1.446272 GTCGAGCGAGAGTTTGGGG 60.446 63.158 0.00 0.00 0.00 4.96
4262 4566 2.583593 GATGGGACGCTGTCGAGC 60.584 66.667 0.00 0.00 42.37 5.03
4269 4573 1.613317 TTGATGGACGATGGGACGCT 61.613 55.000 0.00 0.00 36.70 5.07
4271 4575 0.530650 CCTTGATGGACGATGGGACG 60.531 60.000 0.00 0.00 38.35 4.79
4281 4585 0.391661 GCTCTTGCGACCTTGATGGA 60.392 55.000 0.00 0.00 39.71 3.41
4392 4696 0.752054 TGGGGCTGTTTTTGCTCAAG 59.248 50.000 0.00 0.00 31.40 3.02
4415 4720 2.033299 CCAAACAACTTGCAGATGACGT 59.967 45.455 0.00 0.00 33.27 4.34
4479 4784 2.103373 TGCAGGCAACCAAACAAAGTA 58.897 42.857 0.00 0.00 37.17 2.24
4509 4816 1.065401 CAAACACCGTGTTCATGTGCT 59.935 47.619 17.11 0.00 40.14 4.40
4543 4850 5.107683 GCAAGTGCTAGCTCTTAATCATACG 60.108 44.000 26.76 15.35 38.21 3.06
4627 4935 2.823593 CGCAATCGCCATGGTCCA 60.824 61.111 14.67 0.00 33.11 4.02
4640 4948 1.078497 CAGCCACTATCCACCGCAA 60.078 57.895 0.00 0.00 0.00 4.85
4807 5115 3.207547 CTCGTCCACTGCACCGACA 62.208 63.158 4.47 0.00 0.00 4.35
4811 5119 1.214062 CTCTCTCGTCCACTGCACC 59.786 63.158 0.00 0.00 0.00 5.01
4847 5155 2.180276 ACACTAGAGTCATTTCCGGCT 58.820 47.619 0.00 0.00 0.00 5.52
4862 5170 1.142465 CTCTCCCGCCCTACTACACTA 59.858 57.143 0.00 0.00 0.00 2.74
4877 5185 0.758123 CATCTTGGCCTCCTCTCTCC 59.242 60.000 3.32 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.