Multiple sequence alignment - TraesCS3D01G087000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G087000 chr3D 100.000 4821 0 0 1 4821 43976267 43971447 0.000000e+00 8903.0
1 TraesCS3D01G087000 chr3A 96.464 1923 61 4 1273 3192 56144243 56142325 0.000000e+00 3168.0
2 TraesCS3D01G087000 chr3A 90.792 1401 82 15 3 1384 56145540 56144168 0.000000e+00 1829.0
3 TraesCS3D01G087000 chr3A 93.142 802 48 5 3215 4010 56142337 56141537 0.000000e+00 1170.0
4 TraesCS3D01G087000 chr3A 86.667 315 30 7 4128 4435 56141514 56141205 5.980000e-89 339.0
5 TraesCS3D01G087000 chr3B 91.735 1343 68 14 1 1323 68885363 68884044 0.000000e+00 1825.0
6 TraesCS3D01G087000 chr3B 95.671 1132 40 6 2063 3192 68883250 68882126 0.000000e+00 1810.0
7 TraesCS3D01G087000 chr3B 96.770 743 19 3 1335 2077 68884098 68883361 0.000000e+00 1234.0
8 TraesCS3D01G087000 chr3B 93.085 752 41 6 3215 3957 68882138 68881389 0.000000e+00 1090.0
9 TraesCS3D01G087000 chr3B 86.207 406 28 12 3956 4354 68881307 68880923 9.650000e-112 414.0
10 TraesCS3D01G087000 chr5B 80.194 1030 136 34 1665 2642 249072201 249073214 0.000000e+00 710.0
11 TraesCS3D01G087000 chr5B 86.409 596 60 15 2644 3227 249073518 249074104 2.450000e-177 632.0
12 TraesCS3D01G087000 chr5B 85.573 506 63 10 3299 3798 249074132 249074633 5.530000e-144 521.0
13 TraesCS3D01G087000 chr5B 92.683 82 6 0 1537 1618 249072111 249072192 8.480000e-23 119.0
14 TraesCS3D01G087000 chr5A 80.293 1025 129 32 1674 2645 296304666 296303662 0.000000e+00 706.0
15 TraesCS3D01G087000 chr5A 85.974 606 62 15 2643 3233 296303356 296302759 1.140000e-175 627.0
16 TraesCS3D01G087000 chr5A 86.535 505 59 9 3299 3798 296302737 296302237 9.120000e-152 547.0
17 TraesCS3D01G087000 chr5A 86.486 185 23 2 1349 1532 296304960 296304777 8.180000e-48 202.0
18 TraesCS3D01G087000 chr5D 81.011 969 110 33 1665 2577 223650974 223650024 0.000000e+00 702.0
19 TraesCS3D01G087000 chr5D 84.732 596 65 18 2647 3233 223649562 223648984 1.510000e-159 573.0
20 TraesCS3D01G087000 chr5D 86.733 505 58 9 3299 3798 223648962 223648462 1.960000e-153 553.0
21 TraesCS3D01G087000 chr5D 88.542 96 8 3 1523 1618 223651075 223650983 3.940000e-21 113.0
22 TraesCS3D01G087000 chr4B 91.176 170 12 3 3 172 87679084 87679250 1.350000e-55 228.0
23 TraesCS3D01G087000 chr7A 94.286 35 1 1 4448 4481 12899755 12899721 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G087000 chr3D 43971447 43976267 4820 True 8903.00 8903 100.00000 1 4821 1 chr3D.!!$R1 4820
1 TraesCS3D01G087000 chr3A 56141205 56145540 4335 True 1626.50 3168 91.76625 3 4435 4 chr3A.!!$R1 4432
2 TraesCS3D01G087000 chr3B 68880923 68885363 4440 True 1274.60 1825 92.69360 1 4354 5 chr3B.!!$R1 4353
3 TraesCS3D01G087000 chr5B 249072111 249074633 2522 False 495.50 710 86.21475 1537 3798 4 chr5B.!!$F1 2261
4 TraesCS3D01G087000 chr5A 296302237 296304960 2723 True 520.50 706 84.82200 1349 3798 4 chr5A.!!$R1 2449
5 TraesCS3D01G087000 chr5D 223648462 223651075 2613 True 485.25 702 85.25450 1523 3798 4 chr5D.!!$R1 2275

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
725 749 0.113580 TTAAACCCTGAACCTGCCCC 59.886 55.000 0.00 0.0 0.00 5.80 F
1095 1120 0.109039 GCGACTCTGAACTCCACCTC 60.109 60.000 0.00 0.0 0.00 3.85 F
1176 1201 0.337082 TCCAGGATTCCTCCACCGTA 59.663 55.000 0.98 0.0 44.79 4.02 F
1177 1202 1.200519 CCAGGATTCCTCCACCGTAA 58.799 55.000 0.98 0.0 44.79 3.18 F
3137 3824 1.152694 TCAAGCTTGCCTGCCTGTT 60.153 52.632 21.99 0.0 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2252 2499 2.821378 TCCATTTGAGTCAGGCAATGTG 59.179 45.455 12.74 6.68 0.00 3.21 R
3061 3748 0.179108 CAACGGTAGTAGCAGGCTCC 60.179 60.000 0.00 0.00 0.00 4.70 R
3118 3805 1.458639 AACAGGCAGGCAAGCTTGAC 61.459 55.000 30.39 28.05 43.51 3.18 R
3171 3858 6.464222 TGGAATAACAAGTCTAACTGGACTG 58.536 40.000 0.00 0.00 44.67 3.51 R
4662 5453 0.108138 CTCGAGCTCCCGTTTTGGAT 60.108 55.000 8.47 0.00 42.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
139 140 2.979649 GTTCCTCTCCCCCACGTC 59.020 66.667 0.00 0.00 0.00 4.34
276 285 1.811359 GGATGCTTGCTCATATGCCTC 59.189 52.381 0.00 0.00 0.00 4.70
295 304 1.435515 CCGTGGAGACTCTAGCAGC 59.564 63.158 1.74 0.00 0.00 5.25
412 435 7.180766 AGAGAATGAGAAGGAAGAAGAAGATGT 59.819 37.037 0.00 0.00 0.00 3.06
430 453 0.321122 GTGGTGGCAAGTGAGGAGAG 60.321 60.000 0.00 0.00 0.00 3.20
431 454 0.471780 TGGTGGCAAGTGAGGAGAGA 60.472 55.000 0.00 0.00 0.00 3.10
432 455 0.248843 GGTGGCAAGTGAGGAGAGAG 59.751 60.000 0.00 0.00 0.00 3.20
433 456 1.261480 GTGGCAAGTGAGGAGAGAGA 58.739 55.000 0.00 0.00 0.00 3.10
434 457 1.204467 GTGGCAAGTGAGGAGAGAGAG 59.796 57.143 0.00 0.00 0.00 3.20
435 458 1.076187 TGGCAAGTGAGGAGAGAGAGA 59.924 52.381 0.00 0.00 0.00 3.10
436 459 1.750778 GGCAAGTGAGGAGAGAGAGAG 59.249 57.143 0.00 0.00 0.00 3.20
437 460 2.620367 GGCAAGTGAGGAGAGAGAGAGA 60.620 54.545 0.00 0.00 0.00 3.10
438 461 2.684881 GCAAGTGAGGAGAGAGAGAGAG 59.315 54.545 0.00 0.00 0.00 3.20
439 462 3.622206 GCAAGTGAGGAGAGAGAGAGAGA 60.622 52.174 0.00 0.00 0.00 3.10
440 463 4.194640 CAAGTGAGGAGAGAGAGAGAGAG 58.805 52.174 0.00 0.00 0.00 3.20
441 464 3.724478 AGTGAGGAGAGAGAGAGAGAGA 58.276 50.000 0.00 0.00 0.00 3.10
442 465 3.708631 AGTGAGGAGAGAGAGAGAGAGAG 59.291 52.174 0.00 0.00 0.00 3.20
462 485 4.090819 GAGAGAGAGAAAACCCACCTACT 58.909 47.826 0.00 0.00 0.00 2.57
466 489 2.970640 AGAGAAAACCCACCTACTCGTT 59.029 45.455 0.00 0.00 0.00 3.85
476 499 0.794473 CCTACTCGTTGCCGGTTTTC 59.206 55.000 1.90 0.00 33.95 2.29
520 543 4.675146 CGAAATTCATCCGGTTTTGAGCAT 60.675 41.667 0.00 0.00 0.00 3.79
523 546 2.789213 TCATCCGGTTTTGAGCATGAA 58.211 42.857 0.00 0.00 0.00 2.57
528 551 1.135972 CGGTTTTGAGCATGAAGGACG 60.136 52.381 0.00 0.00 0.00 4.79
550 573 0.378962 TTGTCGCCCAAAACAAGTCG 59.621 50.000 0.00 0.00 31.97 4.18
579 603 5.382618 TGGAGGTCGACTTTAGTAAACTC 57.617 43.478 16.46 9.56 30.85 3.01
583 607 4.999950 AGGTCGACTTTAGTAAACTCGAGA 59.000 41.667 21.68 0.00 36.74 4.04
592 616 7.815068 ACTTTAGTAAACTCGAGAGACGTACTA 59.185 37.037 21.68 17.22 43.13 1.82
643 667 6.618379 GCAAAACACAATAGCATTAAGTTGGC 60.618 38.462 0.00 0.00 0.00 4.52
644 668 5.982890 AACACAATAGCATTAAGTTGGCT 57.017 34.783 0.00 0.00 41.51 4.75
686 710 5.490159 ACCCCTGAAATTATGTTGCAAATG 58.510 37.500 0.00 0.00 0.00 2.32
700 724 6.207928 TGTTGCAAATGTACTCTGTCAATTG 58.792 36.000 0.00 0.00 0.00 2.32
722 746 4.116961 GTTTTGTTAAACCCTGAACCTGC 58.883 43.478 0.00 0.00 38.13 4.85
725 749 0.113580 TTAAACCCTGAACCTGCCCC 59.886 55.000 0.00 0.00 0.00 5.80
732 756 1.228124 TGAACCTGCCCCGAAACAG 60.228 57.895 0.00 0.00 0.00 3.16
745 769 4.062293 CCCGAAACAGTGTGATTGTCTAA 58.938 43.478 0.00 0.00 0.00 2.10
759 783 7.502226 TGTGATTGTCTAAACCTGAATTTCTGT 59.498 33.333 0.00 0.00 0.00 3.41
768 792 9.268268 CTAAACCTGAATTTCTGTAACAGTGTA 57.732 33.333 0.00 0.00 32.61 2.90
799 823 1.153066 TGGTGCGCTGAACCTGAAA 60.153 52.632 15.57 0.00 38.60 2.69
890 915 4.351192 ACTTTGCGTTTTTGACTGACATC 58.649 39.130 0.00 0.00 0.00 3.06
1011 1036 1.221414 GATACAAGATGGCGCCACTC 58.779 55.000 35.50 27.83 0.00 3.51
1063 1088 3.157949 CCCCCTCGGAGGCTTCTC 61.158 72.222 18.91 0.00 32.73 2.87
1095 1120 0.109039 GCGACTCTGAACTCCACCTC 60.109 60.000 0.00 0.00 0.00 3.85
1174 1199 1.522569 GTCCAGGATTCCTCCACCG 59.477 63.158 0.98 0.00 44.79 4.94
1175 1200 1.080354 TCCAGGATTCCTCCACCGT 59.920 57.895 0.98 0.00 44.79 4.83
1176 1201 0.337082 TCCAGGATTCCTCCACCGTA 59.663 55.000 0.98 0.00 44.79 4.02
1177 1202 1.200519 CCAGGATTCCTCCACCGTAA 58.799 55.000 0.98 0.00 44.79 3.18
1211 1236 4.019858 CCCTCTCATTTTCCTTTTCCTCC 58.980 47.826 0.00 0.00 0.00 4.30
1623 1710 9.161629 AGTCAAAAACCAAAAGGTATTTTCTTG 57.838 29.630 0.00 0.00 36.47 3.02
1782 1878 3.442625 TGGAAATGAGATTCTTGCTGCAG 59.557 43.478 10.11 10.11 0.00 4.41
1785 1881 5.336213 GGAAATGAGATTCTTGCTGCAGAAA 60.336 40.000 20.43 13.54 36.36 2.52
1865 1961 5.111293 CAGAACATGCACCTTTGTTTCTTT 58.889 37.500 4.98 0.00 36.25 2.52
1876 1972 6.256321 CACCTTTGTTTCTTTGTCTTCATTGG 59.744 38.462 0.00 0.00 0.00 3.16
2229 2476 5.535783 TCTGAAAGATGCCTTGAAACATTCA 59.464 36.000 0.00 0.00 38.67 2.57
2252 2499 8.948631 TCATTAATCCTGACTTAATGACAGAC 57.051 34.615 12.19 0.00 44.56 3.51
2319 2566 8.807948 AGTACAGAAATTGCATACAAGGTAAT 57.192 30.769 0.00 0.00 39.69 1.89
2347 2594 5.434408 TGCAGCAATAGAAACTCTGATGAT 58.566 37.500 0.00 0.00 0.00 2.45
2483 2731 9.672086 GTAGAATGTGTTTTGTGCTTTAATACA 57.328 29.630 0.00 0.00 0.00 2.29
2934 3615 5.365605 AGGATGATTAACCGGATGTACTTGA 59.634 40.000 9.46 0.00 0.00 3.02
2974 3655 6.875726 GGTGTATTCGGGGAGGTATTTTATAC 59.124 42.308 0.00 0.00 0.00 1.47
3011 3693 2.233271 CCACCAGTCATGTTTCTGCTT 58.767 47.619 0.00 0.00 0.00 3.91
3012 3694 2.227388 CCACCAGTCATGTTTCTGCTTC 59.773 50.000 0.00 0.00 0.00 3.86
3013 3695 2.880268 CACCAGTCATGTTTCTGCTTCA 59.120 45.455 0.00 0.00 0.00 3.02
3093 3780 3.845625 CCGTTGAGGTTTGAGCAAC 57.154 52.632 0.00 0.00 38.73 4.17
3137 3824 1.152694 TCAAGCTTGCCTGCCTGTT 60.153 52.632 21.99 0.00 0.00 3.16
3171 3858 8.667987 TGTTCTATTCAAATTTCGTGTTATGC 57.332 30.769 0.00 0.00 0.00 3.14
3180 3867 2.831685 TCGTGTTATGCAGTCCAGTT 57.168 45.000 0.00 0.00 0.00 3.16
3181 3868 3.945981 TCGTGTTATGCAGTCCAGTTA 57.054 42.857 0.00 0.00 0.00 2.24
3182 3869 3.845178 TCGTGTTATGCAGTCCAGTTAG 58.155 45.455 0.00 0.00 0.00 2.34
3183 3870 3.508402 TCGTGTTATGCAGTCCAGTTAGA 59.492 43.478 0.00 0.00 0.00 2.10
3184 3871 3.612860 CGTGTTATGCAGTCCAGTTAGAC 59.387 47.826 0.00 0.00 37.01 2.59
3186 3873 5.238583 GTGTTATGCAGTCCAGTTAGACTT 58.761 41.667 0.00 0.00 44.83 3.01
3187 3874 5.120830 GTGTTATGCAGTCCAGTTAGACTTG 59.879 44.000 0.00 0.00 44.83 3.16
3190 3878 4.948341 TGCAGTCCAGTTAGACTTGTTA 57.052 40.909 0.00 0.00 44.83 2.41
3203 3891 4.922206 AGACTTGTTATTCCATTGAGGCA 58.078 39.130 0.00 0.00 37.29 4.75
3207 3895 6.825610 ACTTGTTATTCCATTGAGGCAAAAA 58.174 32.000 0.00 0.00 37.29 1.94
3228 3916 6.851222 AAATTCATGTAGCCTCAGTTATCG 57.149 37.500 0.00 0.00 0.00 2.92
3289 3977 5.835113 ATTTCCACCACCAATCGAATTAG 57.165 39.130 0.00 0.00 0.00 1.73
3328 4020 3.181503 GCACTTGCTGGTCTCATATGTTG 60.182 47.826 1.90 0.00 38.21 3.33
3437 4129 3.501062 AGTTTCTCGAGTCGTGTGATACA 59.499 43.478 13.13 0.00 0.00 2.29
3464 4156 6.294473 AGCATCTGGTTAGTTCATATCCAAG 58.706 40.000 0.00 0.00 33.68 3.61
3634 4331 9.438228 GCAGAAAGATAAGGTAGAGTTACTTTT 57.562 33.333 0.00 0.00 32.16 2.27
3822 4523 1.320344 AAGTCAGCCGCGGTCTGATA 61.320 55.000 36.97 23.14 41.93 2.15
3823 4524 1.141019 GTCAGCCGCGGTCTGATAA 59.859 57.895 36.97 22.60 41.93 1.75
3901 4602 7.672983 ATGTGAAACTGAAGTAATACCACAG 57.327 36.000 11.04 11.04 38.04 3.66
3919 4620 3.882888 CACAGAACTTGTACCCACACATT 59.117 43.478 0.00 0.00 38.16 2.71
3939 4640 2.609747 TCCTGGCCTATGTATGAGGAC 58.390 52.381 3.32 0.00 43.20 3.85
3992 4776 6.706270 TGATTAGTTAGATGCCTTCGAATTCC 59.294 38.462 0.00 0.00 0.00 3.01
4028 4812 8.715191 AACATAACAGAGAATTAGCAAGAGAG 57.285 34.615 0.00 0.00 0.00 3.20
4049 4833 3.746492 AGTTGTCGCTGTATTCTTCAACC 59.254 43.478 0.00 0.00 35.71 3.77
4051 4835 1.060698 GTCGCTGTATTCTTCAACCGC 59.939 52.381 0.00 0.00 0.00 5.68
4062 4846 2.028839 TCTTCAACCGCGGACTATGAAA 60.029 45.455 35.90 20.02 30.37 2.69
4063 4847 2.684001 TCAACCGCGGACTATGAAAT 57.316 45.000 35.90 1.64 0.00 2.17
4071 4855 4.142687 CCGCGGACTATGAAATCAAGTTTT 60.143 41.667 24.07 0.00 0.00 2.43
4111 4895 2.647683 TTGTGTGTGCTTGGGTATGA 57.352 45.000 0.00 0.00 0.00 2.15
4149 4933 6.532657 AGCATTGTATTCTGCAAAGCAATAAC 59.467 34.615 7.66 0.00 41.30 1.89
4225 5016 3.572632 ATAGCTCTGATGGTGCATGTT 57.427 42.857 0.00 0.00 36.95 2.71
4261 5052 9.762933 AGCAACTAATTTTGACATAACAACATT 57.237 25.926 0.00 0.00 35.37 2.71
4262 5053 9.796062 GCAACTAATTTTGACATAACAACATTG 57.204 29.630 0.00 0.00 33.89 2.82
4281 5072 6.741724 ACATTGTGGGGATTATTACTTCCTT 58.258 36.000 0.00 0.00 32.34 3.36
4415 5206 9.849166 CCATTAGATTTGTTACCGTAAATGTTT 57.151 29.630 0.00 0.00 0.00 2.83
4448 5239 6.809630 TGCTATATACAACAGCAACAACAA 57.190 33.333 0.00 0.00 42.09 2.83
4449 5240 7.208225 TGCTATATACAACAGCAACAACAAA 57.792 32.000 0.00 0.00 42.09 2.83
4450 5241 7.081349 TGCTATATACAACAGCAACAACAAAC 58.919 34.615 0.00 0.00 42.09 2.93
4451 5242 7.040755 TGCTATATACAACAGCAACAACAAACT 60.041 33.333 0.00 0.00 42.09 2.66
4452 5243 8.447833 GCTATATACAACAGCAACAACAAACTA 58.552 33.333 0.00 0.00 35.35 2.24
4457 5248 7.928908 ACAACAGCAACAACAAACTAATATG 57.071 32.000 0.00 0.00 0.00 1.78
4458 5249 6.420604 ACAACAGCAACAACAAACTAATATGC 59.579 34.615 0.00 0.00 0.00 3.14
4459 5250 6.083098 ACAGCAACAACAAACTAATATGCA 57.917 33.333 0.00 0.00 35.11 3.96
4460 5251 6.151691 ACAGCAACAACAAACTAATATGCAG 58.848 36.000 0.00 0.00 35.11 4.41
4461 5252 6.016360 ACAGCAACAACAAACTAATATGCAGA 60.016 34.615 0.00 0.00 35.11 4.26
4462 5253 6.525628 CAGCAACAACAAACTAATATGCAGAG 59.474 38.462 0.00 0.00 35.11 3.35
4463 5254 6.207417 AGCAACAACAAACTAATATGCAGAGT 59.793 34.615 0.00 0.00 35.11 3.24
4464 5255 7.390440 AGCAACAACAAACTAATATGCAGAGTA 59.610 33.333 0.00 0.00 35.11 2.59
4465 5256 8.020819 GCAACAACAAACTAATATGCAGAGTAA 58.979 33.333 0.00 0.00 33.00 2.24
4482 5273 9.084533 TGCAGAGTAATAAATAAAAACAAGGGT 57.915 29.630 0.00 0.00 0.00 4.34
4483 5274 9.923143 GCAGAGTAATAAATAAAAACAAGGGTT 57.077 29.630 0.00 0.00 39.43 4.11
4493 5284 3.398318 AAACAAGGGTTTTCAGGGAGT 57.602 42.857 0.00 0.00 44.63 3.85
4494 5285 4.529716 AAACAAGGGTTTTCAGGGAGTA 57.470 40.909 0.00 0.00 44.63 2.59
4495 5286 4.741928 AACAAGGGTTTTCAGGGAGTAT 57.258 40.909 0.00 0.00 31.83 2.12
4496 5287 5.853572 AACAAGGGTTTTCAGGGAGTATA 57.146 39.130 0.00 0.00 31.83 1.47
4497 5288 6.402981 AACAAGGGTTTTCAGGGAGTATAT 57.597 37.500 0.00 0.00 31.83 0.86
4498 5289 6.402981 ACAAGGGTTTTCAGGGAGTATATT 57.597 37.500 0.00 0.00 0.00 1.28
4499 5290 6.424032 ACAAGGGTTTTCAGGGAGTATATTC 58.576 40.000 0.00 0.00 0.00 1.75
4500 5291 6.217693 ACAAGGGTTTTCAGGGAGTATATTCT 59.782 38.462 0.00 0.00 0.00 2.40
4501 5292 6.253946 AGGGTTTTCAGGGAGTATATTCTG 57.746 41.667 0.00 0.00 0.00 3.02
4502 5293 4.822350 GGGTTTTCAGGGAGTATATTCTGC 59.178 45.833 0.00 0.00 0.00 4.26
4503 5294 4.822350 GGTTTTCAGGGAGTATATTCTGCC 59.178 45.833 11.36 11.36 44.55 4.85
4507 5298 2.457366 GGGAGTATATTCTGCCGTGG 57.543 55.000 4.15 0.00 36.31 4.94
4508 5299 1.002087 GGGAGTATATTCTGCCGTGGG 59.998 57.143 4.15 0.00 36.31 4.61
4520 5311 3.047877 CGTGGGCGGTGGAAAGAC 61.048 66.667 0.00 0.00 0.00 3.01
4521 5312 2.112297 GTGGGCGGTGGAAAGACA 59.888 61.111 0.00 0.00 0.00 3.41
4522 5313 1.966451 GTGGGCGGTGGAAAGACAG 60.966 63.158 0.00 0.00 0.00 3.51
4523 5314 3.056328 GGGCGGTGGAAAGACAGC 61.056 66.667 0.00 0.00 36.43 4.40
4524 5315 2.281484 GGCGGTGGAAAGACAGCA 60.281 61.111 0.00 0.00 38.63 4.41
4525 5316 1.675641 GGCGGTGGAAAGACAGCAT 60.676 57.895 0.00 0.00 38.63 3.79
4526 5317 1.244019 GGCGGTGGAAAGACAGCATT 61.244 55.000 0.00 0.00 38.63 3.56
4527 5318 0.109597 GCGGTGGAAAGACAGCATTG 60.110 55.000 0.00 0.00 38.72 2.82
4528 5319 1.238439 CGGTGGAAAGACAGCATTGT 58.762 50.000 0.00 0.00 41.18 2.71
4529 5320 2.422597 CGGTGGAAAGACAGCATTGTA 58.577 47.619 0.00 0.00 37.76 2.41
4530 5321 2.416547 CGGTGGAAAGACAGCATTGTAG 59.583 50.000 0.00 0.00 37.76 2.74
4531 5322 2.749621 GGTGGAAAGACAGCATTGTAGG 59.250 50.000 0.00 0.00 37.76 3.18
4532 5323 2.162408 GTGGAAAGACAGCATTGTAGGC 59.838 50.000 0.00 0.00 37.76 3.93
4533 5324 1.745653 GGAAAGACAGCATTGTAGGCC 59.254 52.381 0.00 0.00 37.76 5.19
4534 5325 2.436417 GAAAGACAGCATTGTAGGCCA 58.564 47.619 5.01 0.00 37.76 5.36
4535 5326 2.584835 AAGACAGCATTGTAGGCCAA 57.415 45.000 5.01 0.00 37.76 4.52
4536 5327 2.584835 AGACAGCATTGTAGGCCAAA 57.415 45.000 5.01 0.00 37.76 3.28
4537 5328 2.875296 AGACAGCATTGTAGGCCAAAA 58.125 42.857 5.01 0.00 37.76 2.44
4538 5329 2.821969 AGACAGCATTGTAGGCCAAAAG 59.178 45.455 5.01 0.00 37.76 2.27
4539 5330 1.895131 ACAGCATTGTAGGCCAAAAGG 59.105 47.619 5.01 0.00 36.44 3.11
4540 5331 1.205417 CAGCATTGTAGGCCAAAAGGG 59.795 52.381 5.01 0.00 36.44 3.95
4541 5332 1.203174 AGCATTGTAGGCCAAAAGGGT 60.203 47.619 5.01 0.00 39.65 4.34
4542 5333 1.623311 GCATTGTAGGCCAAAAGGGTT 59.377 47.619 5.01 0.00 39.65 4.11
4543 5334 2.829120 GCATTGTAGGCCAAAAGGGTTA 59.171 45.455 5.01 0.00 39.65 2.85
4544 5335 3.119137 GCATTGTAGGCCAAAAGGGTTAG 60.119 47.826 5.01 0.00 39.65 2.34
4545 5336 2.891191 TGTAGGCCAAAAGGGTTAGG 57.109 50.000 5.01 0.00 39.65 2.69
4546 5337 1.272258 TGTAGGCCAAAAGGGTTAGGC 60.272 52.381 5.01 0.00 46.28 3.93
4549 5340 3.356814 GCCAAAAGGGTTAGGCAGA 57.643 52.632 0.00 0.00 46.26 4.26
4550 5341 1.852633 GCCAAAAGGGTTAGGCAGAT 58.147 50.000 0.00 0.00 46.26 2.90
4551 5342 1.751351 GCCAAAAGGGTTAGGCAGATC 59.249 52.381 0.00 0.00 46.26 2.75
4552 5343 2.883888 GCCAAAAGGGTTAGGCAGATCA 60.884 50.000 0.00 0.00 46.26 2.92
4553 5344 3.430453 CCAAAAGGGTTAGGCAGATCAA 58.570 45.455 0.00 0.00 0.00 2.57
4554 5345 3.445096 CCAAAAGGGTTAGGCAGATCAAG 59.555 47.826 0.00 0.00 0.00 3.02
4555 5346 4.335416 CAAAAGGGTTAGGCAGATCAAGA 58.665 43.478 0.00 0.00 0.00 3.02
4556 5347 3.922171 AAGGGTTAGGCAGATCAAGAG 57.078 47.619 0.00 0.00 0.00 2.85
4557 5348 3.121929 AGGGTTAGGCAGATCAAGAGA 57.878 47.619 0.00 0.00 0.00 3.10
4558 5349 3.663198 AGGGTTAGGCAGATCAAGAGAT 58.337 45.455 0.00 0.00 37.13 2.75
4559 5350 4.820775 AGGGTTAGGCAGATCAAGAGATA 58.179 43.478 0.00 0.00 33.72 1.98
4560 5351 4.837860 AGGGTTAGGCAGATCAAGAGATAG 59.162 45.833 0.00 0.00 33.72 2.08
4561 5352 4.591072 GGGTTAGGCAGATCAAGAGATAGT 59.409 45.833 0.00 0.00 33.72 2.12
4562 5353 5.279256 GGGTTAGGCAGATCAAGAGATAGTC 60.279 48.000 0.00 0.00 33.72 2.59
4563 5354 5.538433 GGTTAGGCAGATCAAGAGATAGTCT 59.462 44.000 0.00 0.00 36.94 3.24
4565 5356 7.231722 GGTTAGGCAGATCAAGAGATAGTCTTA 59.768 40.741 0.00 0.00 44.28 2.10
4566 5357 8.802267 GTTAGGCAGATCAAGAGATAGTCTTAT 58.198 37.037 0.00 0.00 44.28 1.73
4567 5358 7.466746 AGGCAGATCAAGAGATAGTCTTATC 57.533 40.000 0.00 0.00 44.28 1.75
4568 5359 6.150976 AGGCAGATCAAGAGATAGTCTTATCG 59.849 42.308 0.00 0.00 44.28 2.92
4569 5360 6.321717 GCAGATCAAGAGATAGTCTTATCGG 58.678 44.000 0.00 0.00 44.28 4.18
4570 5361 6.321717 CAGATCAAGAGATAGTCTTATCGGC 58.678 44.000 0.00 0.00 44.28 5.54
4571 5362 5.417580 AGATCAAGAGATAGTCTTATCGGCC 59.582 44.000 0.00 0.00 44.28 6.13
4572 5363 3.502595 TCAAGAGATAGTCTTATCGGCCG 59.497 47.826 22.12 22.12 44.28 6.13
4573 5364 3.143211 AGAGATAGTCTTATCGGCCGT 57.857 47.619 27.15 15.22 40.53 5.68
4574 5365 2.814919 AGAGATAGTCTTATCGGCCGTG 59.185 50.000 27.15 13.92 40.53 4.94
4575 5366 1.887198 AGATAGTCTTATCGGCCGTGG 59.113 52.381 27.15 13.49 40.53 4.94
4576 5367 0.966920 ATAGTCTTATCGGCCGTGGG 59.033 55.000 27.15 13.85 0.00 4.61
4595 5386 3.961414 GGTGGGCGGTGGGAAGAA 61.961 66.667 0.00 0.00 0.00 2.52
4596 5387 2.114411 GTGGGCGGTGGGAAGAAA 59.886 61.111 0.00 0.00 0.00 2.52
4597 5388 1.971695 GTGGGCGGTGGGAAGAAAG 60.972 63.158 0.00 0.00 0.00 2.62
4598 5389 3.062466 GGGCGGTGGGAAGAAAGC 61.062 66.667 0.00 0.00 0.00 3.51
4599 5390 2.282180 GGCGGTGGGAAGAAAGCA 60.282 61.111 0.00 0.00 0.00 3.91
4600 5391 2.626780 GGCGGTGGGAAGAAAGCAC 61.627 63.158 0.00 0.00 0.00 4.40
4601 5392 1.600916 GCGGTGGGAAGAAAGCACT 60.601 57.895 0.00 0.00 0.00 4.40
4602 5393 1.856265 GCGGTGGGAAGAAAGCACTG 61.856 60.000 0.00 0.00 0.00 3.66
4603 5394 0.535102 CGGTGGGAAGAAAGCACTGT 60.535 55.000 0.00 0.00 0.00 3.55
4604 5395 1.270625 CGGTGGGAAGAAAGCACTGTA 60.271 52.381 0.00 0.00 0.00 2.74
4605 5396 2.427506 GGTGGGAAGAAAGCACTGTAG 58.572 52.381 0.00 0.00 0.00 2.74
4606 5397 2.038557 GGTGGGAAGAAAGCACTGTAGA 59.961 50.000 0.00 0.00 0.00 2.59
4607 5398 3.067833 GTGGGAAGAAAGCACTGTAGAC 58.932 50.000 0.00 0.00 0.00 2.59
4608 5399 2.972713 TGGGAAGAAAGCACTGTAGACT 59.027 45.455 0.00 0.00 0.00 3.24
4609 5400 3.391296 TGGGAAGAAAGCACTGTAGACTT 59.609 43.478 0.00 0.00 0.00 3.01
4610 5401 4.141482 TGGGAAGAAAGCACTGTAGACTTT 60.141 41.667 3.24 3.24 36.37 2.66
4611 5402 4.452795 GGGAAGAAAGCACTGTAGACTTTC 59.547 45.833 16.31 16.31 46.16 2.62
4612 5403 4.452795 GGAAGAAAGCACTGTAGACTTTCC 59.547 45.833 18.66 8.84 46.71 3.13
4613 5404 4.965200 AGAAAGCACTGTAGACTTTCCT 57.035 40.909 18.66 9.43 46.71 3.36
4614 5405 5.297569 AGAAAGCACTGTAGACTTTCCTT 57.702 39.130 18.66 6.40 46.71 3.36
4615 5406 5.685728 AGAAAGCACTGTAGACTTTCCTTT 58.314 37.500 18.66 5.92 46.71 3.11
4616 5407 6.122964 AGAAAGCACTGTAGACTTTCCTTTT 58.877 36.000 18.66 5.68 46.71 2.27
4617 5408 6.261158 AGAAAGCACTGTAGACTTTCCTTTTC 59.739 38.462 18.66 0.00 46.71 2.29
4618 5409 4.390264 AGCACTGTAGACTTTCCTTTTCC 58.610 43.478 0.00 0.00 0.00 3.13
4619 5410 3.502595 GCACTGTAGACTTTCCTTTTCCC 59.497 47.826 0.00 0.00 0.00 3.97
4620 5411 4.714632 CACTGTAGACTTTCCTTTTCCCA 58.285 43.478 0.00 0.00 0.00 4.37
4621 5412 5.130350 CACTGTAGACTTTCCTTTTCCCAA 58.870 41.667 0.00 0.00 0.00 4.12
4622 5413 5.770162 CACTGTAGACTTTCCTTTTCCCAAT 59.230 40.000 0.00 0.00 0.00 3.16
4623 5414 6.940298 CACTGTAGACTTTCCTTTTCCCAATA 59.060 38.462 0.00 0.00 0.00 1.90
4624 5415 7.611855 CACTGTAGACTTTCCTTTTCCCAATAT 59.388 37.037 0.00 0.00 0.00 1.28
4625 5416 8.832735 ACTGTAGACTTTCCTTTTCCCAATATA 58.167 33.333 0.00 0.00 0.00 0.86
4626 5417 9.331282 CTGTAGACTTTCCTTTTCCCAATATAG 57.669 37.037 0.00 0.00 0.00 1.31
4627 5418 9.053472 TGTAGACTTTCCTTTTCCCAATATAGA 57.947 33.333 0.00 0.00 0.00 1.98
4629 5420 8.986929 AGACTTTCCTTTTCCCAATATAGATG 57.013 34.615 0.00 0.00 0.00 2.90
4630 5421 8.560903 AGACTTTCCTTTTCCCAATATAGATGT 58.439 33.333 0.00 0.00 0.00 3.06
4631 5422 8.525290 ACTTTCCTTTTCCCAATATAGATGTG 57.475 34.615 0.00 0.00 0.00 3.21
4632 5423 6.959639 TTCCTTTTCCCAATATAGATGTGC 57.040 37.500 0.00 0.00 0.00 4.57
4633 5424 6.012337 TCCTTTTCCCAATATAGATGTGCA 57.988 37.500 0.00 0.00 0.00 4.57
4634 5425 6.064060 TCCTTTTCCCAATATAGATGTGCAG 58.936 40.000 0.00 0.00 0.00 4.41
4635 5426 5.829924 CCTTTTCCCAATATAGATGTGCAGT 59.170 40.000 0.00 0.00 0.00 4.40
4636 5427 6.238842 CCTTTTCCCAATATAGATGTGCAGTG 60.239 42.308 0.00 0.00 0.00 3.66
4637 5428 5.372343 TTCCCAATATAGATGTGCAGTGT 57.628 39.130 0.00 0.00 0.00 3.55
4638 5429 4.960938 TCCCAATATAGATGTGCAGTGTC 58.039 43.478 0.00 0.00 0.00 3.67
4639 5430 3.742882 CCCAATATAGATGTGCAGTGTCG 59.257 47.826 0.00 0.00 0.00 4.35
4640 5431 3.185188 CCAATATAGATGTGCAGTGTCGC 59.815 47.826 0.00 0.00 0.00 5.19
4641 5432 2.509052 TATAGATGTGCAGTGTCGCC 57.491 50.000 0.00 0.00 0.00 5.54
4642 5433 0.528466 ATAGATGTGCAGTGTCGCCG 60.528 55.000 0.00 0.00 0.00 6.46
4643 5434 4.152625 GATGTGCAGTGTCGCCGC 62.153 66.667 0.00 0.00 0.00 6.53
4644 5435 4.687215 ATGTGCAGTGTCGCCGCT 62.687 61.111 0.00 0.00 0.00 5.52
4645 5436 4.908687 TGTGCAGTGTCGCCGCTT 62.909 61.111 0.00 0.00 0.00 4.68
4646 5437 3.649986 GTGCAGTGTCGCCGCTTT 61.650 61.111 0.00 0.00 0.00 3.51
4647 5438 2.899838 TGCAGTGTCGCCGCTTTT 60.900 55.556 0.00 0.00 0.00 2.27
4648 5439 2.127232 GCAGTGTCGCCGCTTTTC 60.127 61.111 0.00 0.00 0.00 2.29
4649 5440 2.607892 GCAGTGTCGCCGCTTTTCT 61.608 57.895 0.00 0.00 0.00 2.52
4650 5441 1.493311 CAGTGTCGCCGCTTTTCTC 59.507 57.895 0.00 0.00 0.00 2.87
4651 5442 0.946221 CAGTGTCGCCGCTTTTCTCT 60.946 55.000 0.00 0.00 0.00 3.10
4652 5443 0.667792 AGTGTCGCCGCTTTTCTCTC 60.668 55.000 0.00 0.00 0.00 3.20
4653 5444 1.374252 TGTCGCCGCTTTTCTCTCC 60.374 57.895 0.00 0.00 0.00 3.71
4654 5445 2.101233 GTCGCCGCTTTTCTCTCCC 61.101 63.158 0.00 0.00 0.00 4.30
4655 5446 2.266055 CGCCGCTTTTCTCTCCCT 59.734 61.111 0.00 0.00 0.00 4.20
4656 5447 1.811679 CGCCGCTTTTCTCTCCCTC 60.812 63.158 0.00 0.00 0.00 4.30
4657 5448 1.296715 GCCGCTTTTCTCTCCCTCA 59.703 57.895 0.00 0.00 0.00 3.86
4658 5449 1.021920 GCCGCTTTTCTCTCCCTCAC 61.022 60.000 0.00 0.00 0.00 3.51
4659 5450 0.391793 CCGCTTTTCTCTCCCTCACC 60.392 60.000 0.00 0.00 0.00 4.02
4660 5451 0.321671 CGCTTTTCTCTCCCTCACCA 59.678 55.000 0.00 0.00 0.00 4.17
4661 5452 1.270839 CGCTTTTCTCTCCCTCACCAA 60.271 52.381 0.00 0.00 0.00 3.67
4662 5453 2.810400 CGCTTTTCTCTCCCTCACCAAA 60.810 50.000 0.00 0.00 0.00 3.28
4663 5454 3.425659 GCTTTTCTCTCCCTCACCAAAT 58.574 45.455 0.00 0.00 0.00 2.32
4664 5455 3.441922 GCTTTTCTCTCCCTCACCAAATC 59.558 47.826 0.00 0.00 0.00 2.17
4665 5456 3.721087 TTTCTCTCCCTCACCAAATCC 57.279 47.619 0.00 0.00 0.00 3.01
4666 5457 2.342406 TCTCTCCCTCACCAAATCCA 57.658 50.000 0.00 0.00 0.00 3.41
4667 5458 2.631384 TCTCTCCCTCACCAAATCCAA 58.369 47.619 0.00 0.00 0.00 3.53
4668 5459 2.986019 TCTCTCCCTCACCAAATCCAAA 59.014 45.455 0.00 0.00 0.00 3.28
4669 5460 3.397618 TCTCTCCCTCACCAAATCCAAAA 59.602 43.478 0.00 0.00 0.00 2.44
4670 5461 3.496331 TCTCCCTCACCAAATCCAAAAC 58.504 45.455 0.00 0.00 0.00 2.43
4671 5462 2.228822 CTCCCTCACCAAATCCAAAACG 59.771 50.000 0.00 0.00 0.00 3.60
4672 5463 1.272212 CCCTCACCAAATCCAAAACGG 59.728 52.381 0.00 0.00 0.00 4.44
4673 5464 1.272212 CCTCACCAAATCCAAAACGGG 59.728 52.381 0.00 0.00 34.36 5.28
4674 5465 2.235016 CTCACCAAATCCAAAACGGGA 58.765 47.619 0.00 0.00 42.21 5.14
4675 5466 2.228822 CTCACCAAATCCAAAACGGGAG 59.771 50.000 0.00 0.00 41.08 4.30
4676 5467 0.966179 ACCAAATCCAAAACGGGAGC 59.034 50.000 0.00 0.00 41.08 4.70
4677 5468 1.256812 CCAAATCCAAAACGGGAGCT 58.743 50.000 0.00 0.00 41.08 4.09
4678 5469 1.202348 CCAAATCCAAAACGGGAGCTC 59.798 52.381 4.71 4.71 41.08 4.09
4679 5470 1.135689 CAAATCCAAAACGGGAGCTCG 60.136 52.381 7.83 0.00 41.08 5.03
4680 5471 0.323629 AATCCAAAACGGGAGCTCGA 59.676 50.000 7.83 0.00 41.08 4.04
4681 5472 0.108138 ATCCAAAACGGGAGCTCGAG 60.108 55.000 8.45 8.45 41.08 4.04
4682 5473 1.183030 TCCAAAACGGGAGCTCGAGA 61.183 55.000 18.75 0.00 34.36 4.04
4683 5474 0.320421 CCAAAACGGGAGCTCGAGAA 60.320 55.000 18.75 0.00 0.00 2.87
4684 5475 1.508632 CAAAACGGGAGCTCGAGAAA 58.491 50.000 18.75 0.00 0.00 2.52
4685 5476 2.076863 CAAAACGGGAGCTCGAGAAAT 58.923 47.619 18.75 0.00 0.00 2.17
4686 5477 1.726853 AAACGGGAGCTCGAGAAATG 58.273 50.000 18.75 3.53 0.00 2.32
4687 5478 0.741221 AACGGGAGCTCGAGAAATGC 60.741 55.000 18.75 6.14 0.00 3.56
4688 5479 1.153568 CGGGAGCTCGAGAAATGCA 60.154 57.895 18.75 0.00 0.00 3.96
4689 5480 0.740868 CGGGAGCTCGAGAAATGCAA 60.741 55.000 18.75 0.00 0.00 4.08
4690 5481 1.453155 GGGAGCTCGAGAAATGCAAA 58.547 50.000 18.75 0.00 0.00 3.68
4691 5482 2.019984 GGGAGCTCGAGAAATGCAAAT 58.980 47.619 18.75 0.00 0.00 2.32
4692 5483 2.424956 GGGAGCTCGAGAAATGCAAATT 59.575 45.455 18.75 0.00 0.00 1.82
4693 5484 3.119352 GGGAGCTCGAGAAATGCAAATTT 60.119 43.478 18.75 0.00 0.00 1.82
4694 5485 4.488879 GGAGCTCGAGAAATGCAAATTTT 58.511 39.130 18.75 0.00 0.00 1.82
4695 5486 4.560427 GGAGCTCGAGAAATGCAAATTTTC 59.440 41.667 18.75 3.53 34.08 2.29
4696 5487 4.488879 AGCTCGAGAAATGCAAATTTTCC 58.511 39.130 18.75 0.00 34.34 3.13
4697 5488 4.022068 AGCTCGAGAAATGCAAATTTTCCA 60.022 37.500 18.75 0.00 34.34 3.53
4698 5489 4.325472 GCTCGAGAAATGCAAATTTTCCAG 59.675 41.667 18.75 3.02 34.34 3.86
4699 5490 5.702865 CTCGAGAAATGCAAATTTTCCAGA 58.297 37.500 6.58 6.80 34.34 3.86
4700 5491 5.702865 TCGAGAAATGCAAATTTTCCAGAG 58.297 37.500 7.49 0.00 34.34 3.35
4701 5492 4.860907 CGAGAAATGCAAATTTTCCAGAGG 59.139 41.667 7.49 0.00 34.34 3.69
4702 5493 5.335897 CGAGAAATGCAAATTTTCCAGAGGA 60.336 40.000 7.49 0.00 34.34 3.71
4703 5494 6.423776 AGAAATGCAAATTTTCCAGAGGAA 57.576 33.333 7.49 0.00 40.27 3.36
4710 5501 3.935993 TTTCCAGAGGAAAGGAGCG 57.064 52.632 7.11 0.00 45.42 5.03
4711 5502 0.321653 TTTCCAGAGGAAAGGAGCGC 60.322 55.000 0.00 0.00 45.42 5.92
4712 5503 1.480212 TTCCAGAGGAAAGGAGCGCA 61.480 55.000 11.47 0.00 38.93 6.09
4713 5504 1.222936 CCAGAGGAAAGGAGCGCAT 59.777 57.895 11.47 0.00 0.00 4.73
4714 5505 1.094073 CCAGAGGAAAGGAGCGCATG 61.094 60.000 11.47 0.00 0.00 4.06
4715 5506 1.094073 CAGAGGAAAGGAGCGCATGG 61.094 60.000 11.47 0.00 0.00 3.66
4716 5507 2.439156 AGGAAAGGAGCGCATGGC 60.439 61.111 11.47 0.00 44.05 4.40
4725 5516 3.814268 GCGCATGGCACGGTCAAT 61.814 61.111 0.30 0.00 42.87 2.57
4726 5517 2.876955 CGCATGGCACGGTCAATT 59.123 55.556 0.00 0.00 0.00 2.32
4727 5518 1.514657 CGCATGGCACGGTCAATTG 60.515 57.895 0.00 0.00 0.00 2.32
4728 5519 1.586028 GCATGGCACGGTCAATTGT 59.414 52.632 5.13 0.00 0.00 2.71
4729 5520 0.456653 GCATGGCACGGTCAATTGTC 60.457 55.000 5.13 0.00 0.00 3.18
4730 5521 0.880441 CATGGCACGGTCAATTGTCA 59.120 50.000 5.13 0.00 0.00 3.58
4731 5522 1.473677 CATGGCACGGTCAATTGTCAT 59.526 47.619 5.13 0.00 38.61 3.06
4732 5523 1.614996 TGGCACGGTCAATTGTCATT 58.385 45.000 5.13 0.00 0.00 2.57
4733 5524 1.959985 TGGCACGGTCAATTGTCATTT 59.040 42.857 5.13 0.00 0.00 2.32
4734 5525 2.363680 TGGCACGGTCAATTGTCATTTT 59.636 40.909 5.13 0.00 0.00 1.82
4735 5526 2.986479 GGCACGGTCAATTGTCATTTTC 59.014 45.455 5.13 0.00 0.00 2.29
4736 5527 2.986479 GCACGGTCAATTGTCATTTTCC 59.014 45.455 5.13 0.00 0.00 3.13
4737 5528 3.574614 CACGGTCAATTGTCATTTTCCC 58.425 45.455 5.13 0.00 0.00 3.97
4738 5529 3.255642 CACGGTCAATTGTCATTTTCCCT 59.744 43.478 5.13 0.00 0.00 4.20
4739 5530 3.895041 ACGGTCAATTGTCATTTTCCCTT 59.105 39.130 5.13 0.00 0.00 3.95
4740 5531 4.343814 ACGGTCAATTGTCATTTTCCCTTT 59.656 37.500 5.13 0.00 0.00 3.11
4741 5532 4.923281 CGGTCAATTGTCATTTTCCCTTTC 59.077 41.667 5.13 0.00 0.00 2.62
4742 5533 5.508825 CGGTCAATTGTCATTTTCCCTTTCA 60.509 40.000 5.13 0.00 0.00 2.69
4743 5534 6.466812 GGTCAATTGTCATTTTCCCTTTCAT 58.533 36.000 5.13 0.00 0.00 2.57
4744 5535 6.369615 GGTCAATTGTCATTTTCCCTTTCATG 59.630 38.462 5.13 0.00 0.00 3.07
4745 5536 7.153985 GTCAATTGTCATTTTCCCTTTCATGA 58.846 34.615 5.13 0.00 0.00 3.07
4746 5537 7.330208 GTCAATTGTCATTTTCCCTTTCATGAG 59.670 37.037 5.13 0.00 0.00 2.90
4747 5538 6.923199 ATTGTCATTTTCCCTTTCATGAGT 57.077 33.333 0.00 0.00 0.00 3.41
4748 5539 5.710513 TGTCATTTTCCCTTTCATGAGTG 57.289 39.130 0.00 0.00 0.00 3.51
4749 5540 5.384336 TGTCATTTTCCCTTTCATGAGTGA 58.616 37.500 0.00 0.00 0.00 3.41
4750 5541 6.012113 TGTCATTTTCCCTTTCATGAGTGAT 58.988 36.000 0.00 0.00 33.56 3.06
4751 5542 6.494491 TGTCATTTTCCCTTTCATGAGTGATT 59.506 34.615 0.00 0.00 33.56 2.57
4752 5543 6.810182 GTCATTTTCCCTTTCATGAGTGATTG 59.190 38.462 0.00 0.00 33.56 2.67
4753 5544 6.494491 TCATTTTCCCTTTCATGAGTGATTGT 59.506 34.615 0.00 0.00 33.56 2.71
4754 5545 6.729690 TTTTCCCTTTCATGAGTGATTGTT 57.270 33.333 0.00 0.00 33.56 2.83
4755 5546 7.831691 TTTTCCCTTTCATGAGTGATTGTTA 57.168 32.000 0.00 0.00 33.56 2.41
4756 5547 7.452880 TTTCCCTTTCATGAGTGATTGTTAG 57.547 36.000 0.00 0.00 33.56 2.34
4757 5548 5.500234 TCCCTTTCATGAGTGATTGTTAGG 58.500 41.667 0.00 0.00 33.56 2.69
4758 5549 4.096984 CCCTTTCATGAGTGATTGTTAGGC 59.903 45.833 0.00 0.00 33.56 3.93
4759 5550 4.201851 CCTTTCATGAGTGATTGTTAGGCG 60.202 45.833 0.00 0.00 33.56 5.52
4760 5551 2.905075 TCATGAGTGATTGTTAGGCGG 58.095 47.619 0.00 0.00 0.00 6.13
4761 5552 2.236146 TCATGAGTGATTGTTAGGCGGT 59.764 45.455 0.00 0.00 0.00 5.68
4762 5553 2.380084 TGAGTGATTGTTAGGCGGTC 57.620 50.000 0.00 0.00 0.00 4.79
4763 5554 1.621317 TGAGTGATTGTTAGGCGGTCA 59.379 47.619 0.00 0.00 0.00 4.02
4764 5555 2.236146 TGAGTGATTGTTAGGCGGTCAT 59.764 45.455 0.00 0.00 0.00 3.06
4765 5556 2.866762 GAGTGATTGTTAGGCGGTCATC 59.133 50.000 0.00 0.00 0.00 2.92
4766 5557 1.940613 GTGATTGTTAGGCGGTCATCC 59.059 52.381 0.00 0.00 0.00 3.51
4778 5569 0.179097 GGTCATCCGAACCTCAGAGC 60.179 60.000 0.00 0.00 33.78 4.09
4779 5570 0.179097 GTCATCCGAACCTCAGAGCC 60.179 60.000 0.00 0.00 0.00 4.70
4780 5571 0.614697 TCATCCGAACCTCAGAGCCA 60.615 55.000 0.00 0.00 0.00 4.75
4781 5572 0.460987 CATCCGAACCTCAGAGCCAC 60.461 60.000 0.00 0.00 0.00 5.01
4782 5573 1.617947 ATCCGAACCTCAGAGCCACC 61.618 60.000 0.00 0.00 0.00 4.61
4783 5574 2.125912 CGAACCTCAGAGCCACCG 60.126 66.667 0.00 0.00 0.00 4.94
4784 5575 2.266055 GAACCTCAGAGCCACCGG 59.734 66.667 0.00 0.00 0.00 5.28
4785 5576 3.316573 GAACCTCAGAGCCACCGGG 62.317 68.421 6.32 0.00 37.18 5.73
4786 5577 4.640690 ACCTCAGAGCCACCGGGT 62.641 66.667 6.32 0.00 36.17 5.28
4787 5578 2.363795 CCTCAGAGCCACCGGGTA 60.364 66.667 6.32 0.00 36.17 3.69
4788 5579 2.427245 CCTCAGAGCCACCGGGTAG 61.427 68.421 6.32 0.00 36.17 3.18
4789 5580 1.379977 CTCAGAGCCACCGGGTAGA 60.380 63.158 6.32 0.00 36.17 2.59
4790 5581 1.379977 TCAGAGCCACCGGGTAGAG 60.380 63.158 6.32 0.00 36.17 2.43
4791 5582 1.379977 CAGAGCCACCGGGTAGAGA 60.380 63.158 6.32 0.00 36.17 3.10
4792 5583 0.970937 CAGAGCCACCGGGTAGAGAA 60.971 60.000 6.32 0.00 36.17 2.87
4793 5584 0.252103 AGAGCCACCGGGTAGAGAAA 60.252 55.000 6.32 0.00 36.17 2.52
4794 5585 0.108281 GAGCCACCGGGTAGAGAAAC 60.108 60.000 6.32 0.00 36.17 2.78
4795 5586 1.078637 GCCACCGGGTAGAGAAACC 60.079 63.158 6.32 0.00 38.94 3.27
4804 5595 1.408340 GGTAGAGAAACCCTAGTCGGC 59.592 57.143 0.00 0.00 33.02 5.54
4805 5596 2.377073 GTAGAGAAACCCTAGTCGGCT 58.623 52.381 0.00 0.00 0.00 5.52
4806 5597 2.822707 AGAGAAACCCTAGTCGGCTA 57.177 50.000 0.00 0.00 0.00 3.93
4807 5598 2.657143 AGAGAAACCCTAGTCGGCTAG 58.343 52.381 17.33 17.33 43.26 3.42
4813 5604 3.032339 CTAGTCGGCTAGGGTCGC 58.968 66.667 16.51 0.00 40.68 5.19
4814 5605 1.822613 CTAGTCGGCTAGGGTCGCA 60.823 63.158 16.51 0.00 40.68 5.10
4815 5606 1.378911 TAGTCGGCTAGGGTCGCAA 60.379 57.895 0.00 0.00 40.74 4.85
4816 5607 0.966875 TAGTCGGCTAGGGTCGCAAA 60.967 55.000 0.00 0.00 40.74 3.68
4817 5608 2.098831 GTCGGCTAGGGTCGCAAAC 61.099 63.158 0.00 0.00 40.74 2.93
4818 5609 2.047655 CGGCTAGGGTCGCAAACA 60.048 61.111 0.00 0.00 32.58 2.83
4819 5610 2.100631 CGGCTAGGGTCGCAAACAG 61.101 63.158 0.00 0.00 32.58 3.16
4820 5611 1.295423 GGCTAGGGTCGCAAACAGA 59.705 57.895 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 82 2.686835 GGAGTGGAGAGCTGGGCT 60.687 66.667 0.00 0.00 43.88 5.19
112 113 2.600769 AGAGGAACGCCGAGGTGT 60.601 61.111 1.95 1.95 40.97 4.16
157 158 1.071542 TCACGTTGCCTGATTCCTGAA 59.928 47.619 0.00 0.00 0.00 3.02
162 163 1.079503 GGACTCACGTTGCCTGATTC 58.920 55.000 0.00 0.00 0.00 2.52
276 285 2.010582 GCTGCTAGAGTCTCCACGGG 62.011 65.000 0.00 0.00 0.00 5.28
295 304 1.656441 GGAACCAGTGCAAGTGCTG 59.344 57.895 4.69 0.00 42.66 4.41
337 350 4.081030 CGTGCTCGCCTGCAAGTG 62.081 66.667 0.00 0.00 45.12 3.16
412 435 0.471780 TCTCTCCTCACTTGCCACCA 60.472 55.000 0.00 0.00 0.00 4.17
430 453 5.586643 GGTTTTCTCTCTCTCTCTCTCTCTC 59.413 48.000 0.00 0.00 0.00 3.20
431 454 5.501156 GGTTTTCTCTCTCTCTCTCTCTCT 58.499 45.833 0.00 0.00 0.00 3.10
432 455 4.640647 GGGTTTTCTCTCTCTCTCTCTCTC 59.359 50.000 0.00 0.00 0.00 3.20
433 456 4.044065 TGGGTTTTCTCTCTCTCTCTCTCT 59.956 45.833 0.00 0.00 0.00 3.10
434 457 4.157840 GTGGGTTTTCTCTCTCTCTCTCTC 59.842 50.000 0.00 0.00 0.00 3.20
435 458 4.086457 GTGGGTTTTCTCTCTCTCTCTCT 58.914 47.826 0.00 0.00 0.00 3.10
436 459 3.194755 GGTGGGTTTTCTCTCTCTCTCTC 59.805 52.174 0.00 0.00 0.00 3.20
437 460 3.169908 GGTGGGTTTTCTCTCTCTCTCT 58.830 50.000 0.00 0.00 0.00 3.10
438 461 3.169908 AGGTGGGTTTTCTCTCTCTCTC 58.830 50.000 0.00 0.00 0.00 3.20
439 462 3.268034 AGGTGGGTTTTCTCTCTCTCT 57.732 47.619 0.00 0.00 0.00 3.10
440 463 4.090819 AGTAGGTGGGTTTTCTCTCTCTC 58.909 47.826 0.00 0.00 0.00 3.20
441 464 4.090819 GAGTAGGTGGGTTTTCTCTCTCT 58.909 47.826 0.00 0.00 0.00 3.10
442 465 3.119424 CGAGTAGGTGGGTTTTCTCTCTC 60.119 52.174 0.00 0.00 0.00 3.20
466 489 0.838987 AGTAGAGGGGAAAACCGGCA 60.839 55.000 0.00 0.00 41.60 5.69
476 499 2.027100 GTCCAAAACCAGAGTAGAGGGG 60.027 54.545 0.00 0.00 0.00 4.79
520 543 2.835605 GGCGACAATTCGTCCTTCA 58.164 52.632 0.00 0.00 44.45 3.02
528 551 3.049912 GACTTGTTTTGGGCGACAATTC 58.950 45.455 0.00 0.00 39.21 2.17
550 573 2.990066 AAGTCGACCTCCAATCCATC 57.010 50.000 13.01 0.00 0.00 3.51
579 603 1.774085 GCGCAAATAGTACGTCTCTCG 59.226 52.381 0.30 0.00 46.00 4.04
583 607 1.203994 AGTGGCGCAAATAGTACGTCT 59.796 47.619 10.83 0.00 31.50 4.18
592 616 0.037697 TCGTACTCAGTGGCGCAAAT 60.038 50.000 10.83 0.00 0.00 2.32
686 710 9.016623 GGTTTAACAAAACAATTGACAGAGTAC 57.983 33.333 13.59 0.09 34.46 2.73
700 724 4.116961 GCAGGTTCAGGGTTTAACAAAAC 58.883 43.478 0.00 0.00 0.00 2.43
722 746 1.535462 GACAATCACACTGTTTCGGGG 59.465 52.381 0.00 0.00 0.00 5.73
725 749 5.236478 AGGTTTAGACAATCACACTGTTTCG 59.764 40.000 0.00 0.00 0.00 3.46
732 756 7.805071 CAGAAATTCAGGTTTAGACAATCACAC 59.195 37.037 0.00 0.00 0.00 3.82
745 769 7.308589 GCATACACTGTTACAGAAATTCAGGTT 60.309 37.037 20.07 0.00 35.18 3.50
759 783 5.336451 CCAGTACACTGAGCATACACTGTTA 60.336 44.000 10.96 0.00 46.59 2.41
768 792 0.390340 CGCACCAGTACACTGAGCAT 60.390 55.000 19.57 0.67 46.59 3.79
799 823 3.306780 CCGAACTGTACAGGTTCCAGAAT 60.307 47.826 26.12 0.00 39.65 2.40
890 915 9.959749 TTGGTTATTGACTAAAGCTAACAAAAG 57.040 29.630 0.00 0.00 0.00 2.27
1032 1057 2.613482 GGGGGAAGGGGAAGGTGAC 61.613 68.421 0.00 0.00 0.00 3.67
1063 1088 1.372087 GAGTCGCTGCCTGAATTGGG 61.372 60.000 0.00 0.00 0.00 4.12
1095 1120 2.284798 CTGGGTCGGAGTGGTCATCG 62.285 65.000 0.00 0.00 0.00 3.84
1143 1168 3.336715 CTGGACGTCGTCATCGGCA 62.337 63.158 25.64 13.30 42.21 5.69
1174 1199 1.382283 AGGGGAGGGCGGTACTTAC 60.382 63.158 0.00 0.00 0.00 2.34
1175 1200 1.075748 GAGGGGAGGGCGGTACTTA 60.076 63.158 0.00 0.00 0.00 2.24
1176 1201 2.365237 GAGGGGAGGGCGGTACTT 60.365 66.667 0.00 0.00 0.00 2.24
1177 1202 3.357082 AGAGGGGAGGGCGGTACT 61.357 66.667 0.00 0.00 0.00 2.73
1211 1236 2.288886 GCTAAGCAACCTATACCCCTCG 60.289 54.545 0.00 0.00 0.00 4.63
1376 1434 2.970640 CTCTCCCATCTCACCATCATCA 59.029 50.000 0.00 0.00 0.00 3.07
1623 1710 7.011389 TGAGTAGATGTTATGCAAAGCACATAC 59.989 37.037 0.00 0.00 43.04 2.39
1782 1878 5.186996 TGTTTGAAGTGGAGAATGCTTTC 57.813 39.130 4.20 4.20 0.00 2.62
1785 1881 3.005155 GCTTGTTTGAAGTGGAGAATGCT 59.995 43.478 0.00 0.00 0.00 3.79
1865 1961 7.773224 TCTTCAGAAGTAAAACCAATGAAGACA 59.227 33.333 10.09 0.00 43.59 3.41
2173 2420 6.485171 AGACTGGATAGCAGTTTTACCATTT 58.515 36.000 0.00 0.00 32.33 2.32
2229 2476 8.321353 TGTGTCTGTCATTAAGTCAGGATTAAT 58.679 33.333 0.00 0.00 34.66 1.40
2252 2499 2.821378 TCCATTTGAGTCAGGCAATGTG 59.179 45.455 12.74 6.68 0.00 3.21
2319 2566 5.764686 TCAGAGTTTCTATTGCTGCAAAAGA 59.235 36.000 20.06 6.97 0.00 2.52
2347 2594 6.894339 TCGAAGAATATATCCTGCAGTACA 57.106 37.500 13.81 0.00 0.00 2.90
2934 3615 5.586243 CGAATACACCAACATCAGATTTCCT 59.414 40.000 0.00 0.00 0.00 3.36
2974 3655 2.350522 GTGGCCCTCATAATAGATGCG 58.649 52.381 0.00 0.00 0.00 4.73
3028 3715 5.765176 TGCAAAATGAATGAGAAGACACAG 58.235 37.500 0.00 0.00 0.00 3.66
3061 3748 0.179108 CAACGGTAGTAGCAGGCTCC 60.179 60.000 0.00 0.00 0.00 4.70
3118 3805 1.458639 AACAGGCAGGCAAGCTTGAC 61.459 55.000 30.39 28.05 43.51 3.18
3171 3858 6.464222 TGGAATAACAAGTCTAACTGGACTG 58.536 40.000 0.00 0.00 44.67 3.51
3180 3867 6.061022 TGCCTCAATGGAATAACAAGTCTA 57.939 37.500 0.00 0.00 38.35 2.59
3181 3868 4.922206 TGCCTCAATGGAATAACAAGTCT 58.078 39.130 0.00 0.00 38.35 3.24
3182 3869 5.643379 TTGCCTCAATGGAATAACAAGTC 57.357 39.130 0.00 0.00 38.35 3.01
3183 3870 6.418057 TTTTGCCTCAATGGAATAACAAGT 57.582 33.333 0.00 0.00 38.35 3.16
3184 3871 7.910441 ATTTTTGCCTCAATGGAATAACAAG 57.090 32.000 0.00 0.00 38.35 3.16
3186 3873 7.448420 TGAATTTTTGCCTCAATGGAATAACA 58.552 30.769 0.00 0.00 38.35 2.41
3187 3874 7.903995 TGAATTTTTGCCTCAATGGAATAAC 57.096 32.000 0.00 0.00 38.35 1.89
3190 3878 6.478129 ACATGAATTTTTGCCTCAATGGAAT 58.522 32.000 0.00 0.00 38.35 3.01
3203 3891 7.552687 TCGATAACTGAGGCTACATGAATTTTT 59.447 33.333 0.00 0.00 0.00 1.94
3207 3895 5.791336 TCGATAACTGAGGCTACATGAAT 57.209 39.130 0.00 0.00 0.00 2.57
3247 3935 7.168905 GGAAATATCCCCGAAATCAGTCTAAT 58.831 38.462 0.00 0.00 40.10 1.73
3328 4020 2.230660 CCTGAGTTGAAACAAGGGGTC 58.769 52.381 6.93 0.00 33.66 4.46
3437 4129 5.012561 GGATATGAACTAACCAGATGCTCCT 59.987 44.000 0.00 0.00 0.00 3.69
3471 4163 5.507985 GGCAAAAAGAAACTAGTGCAGATGT 60.508 40.000 0.00 0.00 33.66 3.06
3487 4179 5.875910 TCATAAATGCATTCAGGGCAAAAAG 59.124 36.000 13.38 0.00 45.60 2.27
3588 4285 3.440356 CTTTGAAGCGCGGCGATCC 62.440 63.158 28.54 8.74 0.00 3.36
3634 4331 1.403679 CGAGAAAAACCAACTGCACCA 59.596 47.619 0.00 0.00 0.00 4.17
3901 4602 3.502211 CAGGAATGTGTGGGTACAAGTTC 59.498 47.826 0.00 0.00 38.82 3.01
3919 4620 2.609747 GTCCTCATACATAGGCCAGGA 58.390 52.381 5.01 2.10 33.84 3.86
3939 4640 6.476706 TCAGCAACTAATATTCATGACACTCG 59.523 38.462 0.00 0.00 0.00 4.18
3975 4759 4.590647 AGATGAGGAATTCGAAGGCATCTA 59.409 41.667 20.03 8.28 39.17 1.98
4028 4812 3.423123 CGGTTGAAGAATACAGCGACAAC 60.423 47.826 0.00 0.00 36.47 3.32
4049 4833 4.600012 AAACTTGATTTCATAGTCCGCG 57.400 40.909 0.00 0.00 0.00 6.46
4089 4873 3.701542 TCATACCCAAGCACACACAAAAA 59.298 39.130 0.00 0.00 0.00 1.94
4090 4874 3.291584 TCATACCCAAGCACACACAAAA 58.708 40.909 0.00 0.00 0.00 2.44
4094 4878 2.351738 GCTTTCATACCCAAGCACACAC 60.352 50.000 0.00 0.00 44.18 3.82
4096 4880 2.636768 GCTTTCATACCCAAGCACAC 57.363 50.000 0.00 0.00 44.18 3.82
4111 4895 6.604795 AGAATACAATGCTATGACCTTGCTTT 59.395 34.615 0.00 0.00 0.00 3.51
4149 4933 2.840651 ACACAACTCAGATAAGAGGGGG 59.159 50.000 0.00 0.00 39.97 5.40
4261 5052 4.472108 ACGAAGGAAGTAATAATCCCCACA 59.528 41.667 0.00 0.00 36.31 4.17
4262 5053 5.032327 ACGAAGGAAGTAATAATCCCCAC 57.968 43.478 0.00 0.00 36.31 4.61
4363 5154 9.804758 GTACTGATTTAGTATTGCACTAGAAGT 57.195 33.333 0.00 0.00 43.44 3.01
4365 5156 8.755028 TGGTACTGATTTAGTATTGCACTAGAA 58.245 33.333 0.00 0.00 43.44 2.10
4385 5176 9.895138 ATTTACGGTAACAAATCTAATGGTACT 57.105 29.630 0.00 0.00 40.15 2.73
4386 5177 9.925268 CATTTACGGTAACAAATCTAATGGTAC 57.075 33.333 0.00 0.00 39.67 3.34
4432 5223 7.593273 GCATATTAGTTTGTTGTTGCTGTTGTA 59.407 33.333 0.00 0.00 0.00 2.41
4435 5226 6.511416 TGCATATTAGTTTGTTGTTGCTGTT 58.489 32.000 0.00 0.00 0.00 3.16
4436 5227 6.016360 TCTGCATATTAGTTTGTTGTTGCTGT 60.016 34.615 0.00 0.00 32.05 4.40
4437 5228 6.380995 TCTGCATATTAGTTTGTTGTTGCTG 58.619 36.000 0.00 0.00 0.00 4.41
4438 5229 6.207417 ACTCTGCATATTAGTTTGTTGTTGCT 59.793 34.615 0.00 0.00 0.00 3.91
4439 5230 6.381801 ACTCTGCATATTAGTTTGTTGTTGC 58.618 36.000 0.00 0.00 0.00 4.17
4456 5247 9.084533 ACCCTTGTTTTTATTTATTACTCTGCA 57.915 29.630 0.00 0.00 0.00 4.41
4457 5248 9.923143 AACCCTTGTTTTTATTTATTACTCTGC 57.077 29.630 0.00 0.00 0.00 4.26
4473 5264 3.398318 ACTCCCTGAAAACCCTTGTTT 57.602 42.857 0.00 0.00 46.50 2.83
4474 5265 4.741928 ATACTCCCTGAAAACCCTTGTT 57.258 40.909 0.00 0.00 35.82 2.83
4475 5266 6.217693 AGAATATACTCCCTGAAAACCCTTGT 59.782 38.462 0.00 0.00 0.00 3.16
4476 5267 6.543831 CAGAATATACTCCCTGAAAACCCTTG 59.456 42.308 0.00 0.00 0.00 3.61
4477 5268 6.663734 CAGAATATACTCCCTGAAAACCCTT 58.336 40.000 0.00 0.00 0.00 3.95
4478 5269 5.398012 GCAGAATATACTCCCTGAAAACCCT 60.398 44.000 0.00 0.00 0.00 4.34
4479 5270 4.822350 GCAGAATATACTCCCTGAAAACCC 59.178 45.833 0.00 0.00 0.00 4.11
4480 5271 4.822350 GGCAGAATATACTCCCTGAAAACC 59.178 45.833 0.00 0.00 0.00 3.27
4481 5272 4.511826 CGGCAGAATATACTCCCTGAAAAC 59.488 45.833 0.00 0.00 0.00 2.43
4482 5273 4.163458 ACGGCAGAATATACTCCCTGAAAA 59.837 41.667 0.00 0.00 0.00 2.29
4483 5274 3.709653 ACGGCAGAATATACTCCCTGAAA 59.290 43.478 0.00 0.00 0.00 2.69
4484 5275 3.069586 CACGGCAGAATATACTCCCTGAA 59.930 47.826 0.00 0.00 0.00 3.02
4485 5276 2.628178 CACGGCAGAATATACTCCCTGA 59.372 50.000 0.00 0.00 0.00 3.86
4486 5277 2.289072 CCACGGCAGAATATACTCCCTG 60.289 54.545 0.00 0.00 0.00 4.45
4487 5278 1.971357 CCACGGCAGAATATACTCCCT 59.029 52.381 0.00 0.00 0.00 4.20
4488 5279 1.002087 CCCACGGCAGAATATACTCCC 59.998 57.143 0.00 0.00 0.00 4.30
4489 5280 2.457366 CCCACGGCAGAATATACTCC 57.543 55.000 0.00 0.00 0.00 3.85
4503 5294 3.047877 GTCTTTCCACCGCCCACG 61.048 66.667 0.00 0.00 39.67 4.94
4504 5295 1.966451 CTGTCTTTCCACCGCCCAC 60.966 63.158 0.00 0.00 0.00 4.61
4505 5296 2.429930 CTGTCTTTCCACCGCCCA 59.570 61.111 0.00 0.00 0.00 5.36
4506 5297 3.056328 GCTGTCTTTCCACCGCCC 61.056 66.667 0.00 0.00 0.00 6.13
4507 5298 1.244019 AATGCTGTCTTTCCACCGCC 61.244 55.000 0.00 0.00 0.00 6.13
4508 5299 0.109597 CAATGCTGTCTTTCCACCGC 60.110 55.000 0.00 0.00 0.00 5.68
4509 5300 1.238439 ACAATGCTGTCTTTCCACCG 58.762 50.000 0.00 0.00 0.00 4.94
4510 5301 2.749621 CCTACAATGCTGTCTTTCCACC 59.250 50.000 0.00 0.00 36.96 4.61
4511 5302 2.162408 GCCTACAATGCTGTCTTTCCAC 59.838 50.000 0.00 0.00 36.96 4.02
4512 5303 2.436417 GCCTACAATGCTGTCTTTCCA 58.564 47.619 0.00 0.00 36.96 3.53
4513 5304 1.745653 GGCCTACAATGCTGTCTTTCC 59.254 52.381 0.00 0.00 36.96 3.13
4514 5305 2.436417 TGGCCTACAATGCTGTCTTTC 58.564 47.619 3.32 0.00 36.96 2.62
4515 5306 2.584835 TGGCCTACAATGCTGTCTTT 57.415 45.000 3.32 0.00 36.96 2.52
4516 5307 2.584835 TTGGCCTACAATGCTGTCTT 57.415 45.000 3.32 0.00 36.96 3.01
4517 5308 2.584835 TTTGGCCTACAATGCTGTCT 57.415 45.000 3.32 0.00 39.21 3.41
4518 5309 2.094545 CCTTTTGGCCTACAATGCTGTC 60.095 50.000 3.32 0.00 39.21 3.51
4519 5310 1.895131 CCTTTTGGCCTACAATGCTGT 59.105 47.619 3.32 0.00 39.21 4.40
4520 5311 1.205417 CCCTTTTGGCCTACAATGCTG 59.795 52.381 3.32 0.00 39.21 4.41
4521 5312 1.203174 ACCCTTTTGGCCTACAATGCT 60.203 47.619 3.32 0.00 39.21 3.79
4522 5313 1.266178 ACCCTTTTGGCCTACAATGC 58.734 50.000 3.32 0.00 39.21 3.56
4523 5314 3.447229 CCTAACCCTTTTGGCCTACAATG 59.553 47.826 3.32 0.00 39.21 2.82
4524 5315 3.708451 CCTAACCCTTTTGGCCTACAAT 58.292 45.455 3.32 0.00 39.21 2.71
4525 5316 2.820105 GCCTAACCCTTTTGGCCTACAA 60.820 50.000 3.32 0.00 45.08 2.41
4526 5317 1.272258 GCCTAACCCTTTTGGCCTACA 60.272 52.381 3.32 0.00 45.08 2.74
4527 5318 1.471119 GCCTAACCCTTTTGGCCTAC 58.529 55.000 3.32 0.00 45.08 3.18
4528 5319 3.991972 GCCTAACCCTTTTGGCCTA 57.008 52.632 3.32 0.00 45.08 3.93
4529 5320 4.865629 GCCTAACCCTTTTGGCCT 57.134 55.556 3.32 0.00 45.08 5.19
4532 5323 3.085952 TGATCTGCCTAACCCTTTTGG 57.914 47.619 0.00 0.00 41.37 3.28
4533 5324 4.335416 TCTTGATCTGCCTAACCCTTTTG 58.665 43.478 0.00 0.00 0.00 2.44
4534 5325 4.289672 TCTCTTGATCTGCCTAACCCTTTT 59.710 41.667 0.00 0.00 0.00 2.27
4535 5326 3.846588 TCTCTTGATCTGCCTAACCCTTT 59.153 43.478 0.00 0.00 0.00 3.11
4536 5327 3.454858 TCTCTTGATCTGCCTAACCCTT 58.545 45.455 0.00 0.00 0.00 3.95
4537 5328 3.121929 TCTCTTGATCTGCCTAACCCT 57.878 47.619 0.00 0.00 0.00 4.34
4538 5329 4.591072 ACTATCTCTTGATCTGCCTAACCC 59.409 45.833 0.00 0.00 34.32 4.11
4539 5330 5.538433 AGACTATCTCTTGATCTGCCTAACC 59.462 44.000 0.00 0.00 34.32 2.85
4540 5331 6.648879 AGACTATCTCTTGATCTGCCTAAC 57.351 41.667 0.00 0.00 34.32 2.34
4541 5332 8.948401 ATAAGACTATCTCTTGATCTGCCTAA 57.052 34.615 0.00 0.00 39.74 2.69
4542 5333 7.335673 CGATAAGACTATCTCTTGATCTGCCTA 59.664 40.741 0.00 0.00 39.74 3.93
4543 5334 6.150976 CGATAAGACTATCTCTTGATCTGCCT 59.849 42.308 0.00 0.00 39.74 4.75
4544 5335 6.321717 CGATAAGACTATCTCTTGATCTGCC 58.678 44.000 0.00 0.00 39.74 4.85
4545 5336 6.321717 CCGATAAGACTATCTCTTGATCTGC 58.678 44.000 0.00 0.00 39.74 4.26
4546 5337 6.321717 GCCGATAAGACTATCTCTTGATCTG 58.678 44.000 0.00 0.00 39.74 2.90
4547 5338 5.417580 GGCCGATAAGACTATCTCTTGATCT 59.582 44.000 0.00 0.00 39.74 2.75
4548 5339 5.646606 GGCCGATAAGACTATCTCTTGATC 58.353 45.833 0.00 0.00 39.74 2.92
4549 5340 4.156922 CGGCCGATAAGACTATCTCTTGAT 59.843 45.833 24.07 0.00 39.74 2.57
4550 5341 3.502595 CGGCCGATAAGACTATCTCTTGA 59.497 47.826 24.07 0.00 39.74 3.02
4551 5342 3.253677 ACGGCCGATAAGACTATCTCTTG 59.746 47.826 35.90 0.00 39.74 3.02
4552 5343 3.253677 CACGGCCGATAAGACTATCTCTT 59.746 47.826 35.90 0.00 42.33 2.85
4553 5344 2.814919 CACGGCCGATAAGACTATCTCT 59.185 50.000 35.90 0.00 33.03 3.10
4554 5345 2.095161 CCACGGCCGATAAGACTATCTC 60.095 54.545 35.90 0.00 33.03 2.75
4555 5346 1.887198 CCACGGCCGATAAGACTATCT 59.113 52.381 35.90 0.00 33.03 1.98
4556 5347 1.067776 CCCACGGCCGATAAGACTATC 60.068 57.143 35.90 0.00 0.00 2.08
4557 5348 0.966920 CCCACGGCCGATAAGACTAT 59.033 55.000 35.90 1.64 0.00 2.12
4558 5349 1.741327 GCCCACGGCCGATAAGACTA 61.741 60.000 35.90 0.00 44.06 2.59
4559 5350 3.090219 GCCCACGGCCGATAAGACT 62.090 63.158 35.90 3.57 44.06 3.24
4560 5351 2.588034 GCCCACGGCCGATAAGAC 60.588 66.667 35.90 12.10 44.06 3.01
4578 5369 3.501040 TTTCTTCCCACCGCCCACC 62.501 63.158 0.00 0.00 0.00 4.61
4579 5370 1.971695 CTTTCTTCCCACCGCCCAC 60.972 63.158 0.00 0.00 0.00 4.61
4580 5371 2.434331 CTTTCTTCCCACCGCCCA 59.566 61.111 0.00 0.00 0.00 5.36
4581 5372 3.062466 GCTTTCTTCCCACCGCCC 61.062 66.667 0.00 0.00 0.00 6.13
4582 5373 2.282180 TGCTTTCTTCCCACCGCC 60.282 61.111 0.00 0.00 0.00 6.13
4583 5374 1.600916 AGTGCTTTCTTCCCACCGC 60.601 57.895 0.00 0.00 0.00 5.68
4584 5375 0.535102 ACAGTGCTTTCTTCCCACCG 60.535 55.000 0.00 0.00 0.00 4.94
4585 5376 2.038557 TCTACAGTGCTTTCTTCCCACC 59.961 50.000 0.00 0.00 0.00 4.61
4586 5377 3.067833 GTCTACAGTGCTTTCTTCCCAC 58.932 50.000 0.00 0.00 0.00 4.61
4587 5378 2.972713 AGTCTACAGTGCTTTCTTCCCA 59.027 45.455 0.00 0.00 0.00 4.37
4588 5379 3.686916 AGTCTACAGTGCTTTCTTCCC 57.313 47.619 0.00 0.00 0.00 3.97
4589 5380 4.452795 GGAAAGTCTACAGTGCTTTCTTCC 59.547 45.833 15.92 7.48 44.27 3.46
4590 5381 5.301555 AGGAAAGTCTACAGTGCTTTCTTC 58.698 41.667 15.92 5.55 44.27 2.87
4591 5382 5.297569 AGGAAAGTCTACAGTGCTTTCTT 57.702 39.130 15.92 9.22 44.27 2.52
4592 5383 4.965200 AGGAAAGTCTACAGTGCTTTCT 57.035 40.909 15.92 4.92 44.27 2.52
4593 5384 6.378710 AAAAGGAAAGTCTACAGTGCTTTC 57.621 37.500 10.73 10.73 44.17 2.62
4594 5385 5.299531 GGAAAAGGAAAGTCTACAGTGCTTT 59.700 40.000 0.00 0.00 33.68 3.51
4595 5386 4.822350 GGAAAAGGAAAGTCTACAGTGCTT 59.178 41.667 0.00 0.00 0.00 3.91
4596 5387 4.390264 GGAAAAGGAAAGTCTACAGTGCT 58.610 43.478 0.00 0.00 0.00 4.40
4597 5388 3.502595 GGGAAAAGGAAAGTCTACAGTGC 59.497 47.826 0.00 0.00 0.00 4.40
4598 5389 4.714632 TGGGAAAAGGAAAGTCTACAGTG 58.285 43.478 0.00 0.00 0.00 3.66
4599 5390 5.382664 TTGGGAAAAGGAAAGTCTACAGT 57.617 39.130 0.00 0.00 0.00 3.55
4600 5391 9.331282 CTATATTGGGAAAAGGAAAGTCTACAG 57.669 37.037 0.00 0.00 0.00 2.74
4601 5392 9.053472 TCTATATTGGGAAAAGGAAAGTCTACA 57.947 33.333 0.00 0.00 0.00 2.74
4604 5395 8.560903 ACATCTATATTGGGAAAAGGAAAGTCT 58.439 33.333 0.00 0.00 0.00 3.24
4605 5396 8.624776 CACATCTATATTGGGAAAAGGAAAGTC 58.375 37.037 0.00 0.00 0.00 3.01
4606 5397 7.068716 GCACATCTATATTGGGAAAAGGAAAGT 59.931 37.037 0.00 0.00 0.00 2.66
4607 5398 7.068593 TGCACATCTATATTGGGAAAAGGAAAG 59.931 37.037 0.00 0.00 0.00 2.62
4608 5399 6.894654 TGCACATCTATATTGGGAAAAGGAAA 59.105 34.615 0.00 0.00 0.00 3.13
4609 5400 6.430864 TGCACATCTATATTGGGAAAAGGAA 58.569 36.000 0.00 0.00 0.00 3.36
4610 5401 6.012337 TGCACATCTATATTGGGAAAAGGA 57.988 37.500 0.00 0.00 0.00 3.36
4611 5402 5.829924 ACTGCACATCTATATTGGGAAAAGG 59.170 40.000 0.00 0.00 0.00 3.11
4612 5403 6.319658 ACACTGCACATCTATATTGGGAAAAG 59.680 38.462 0.00 0.00 0.00 2.27
4613 5404 6.186957 ACACTGCACATCTATATTGGGAAAA 58.813 36.000 0.00 0.00 0.00 2.29
4614 5405 5.754782 ACACTGCACATCTATATTGGGAAA 58.245 37.500 0.00 0.00 0.00 3.13
4615 5406 5.368145 GACACTGCACATCTATATTGGGAA 58.632 41.667 0.00 0.00 0.00 3.97
4616 5407 4.501400 CGACACTGCACATCTATATTGGGA 60.501 45.833 0.00 0.00 0.00 4.37
4617 5408 3.742882 CGACACTGCACATCTATATTGGG 59.257 47.826 0.00 0.00 0.00 4.12
4618 5409 3.185188 GCGACACTGCACATCTATATTGG 59.815 47.826 0.00 0.00 34.15 3.16
4619 5410 3.185188 GGCGACACTGCACATCTATATTG 59.815 47.826 0.00 0.00 36.28 1.90
4620 5411 3.393800 GGCGACACTGCACATCTATATT 58.606 45.455 0.00 0.00 36.28 1.28
4621 5412 2.608016 CGGCGACACTGCACATCTATAT 60.608 50.000 0.00 0.00 36.28 0.86
4622 5413 1.269051 CGGCGACACTGCACATCTATA 60.269 52.381 0.00 0.00 36.28 1.31
4623 5414 0.528466 CGGCGACACTGCACATCTAT 60.528 55.000 0.00 0.00 36.28 1.98
4624 5415 1.153842 CGGCGACACTGCACATCTA 60.154 57.895 0.00 0.00 36.28 1.98
4625 5416 2.433145 CGGCGACACTGCACATCT 60.433 61.111 0.00 0.00 36.28 2.90
4632 5423 0.946221 AGAGAAAAGCGGCGACACTG 60.946 55.000 12.98 0.00 0.00 3.66
4633 5424 0.667792 GAGAGAAAAGCGGCGACACT 60.668 55.000 12.98 1.18 0.00 3.55
4634 5425 1.627550 GGAGAGAAAAGCGGCGACAC 61.628 60.000 12.98 0.00 0.00 3.67
4635 5426 1.374252 GGAGAGAAAAGCGGCGACA 60.374 57.895 12.98 0.00 0.00 4.35
4636 5427 2.101233 GGGAGAGAAAAGCGGCGAC 61.101 63.158 12.98 1.23 0.00 5.19
4637 5428 2.227089 GAGGGAGAGAAAAGCGGCGA 62.227 60.000 12.98 0.00 0.00 5.54
4638 5429 1.811679 GAGGGAGAGAAAAGCGGCG 60.812 63.158 0.51 0.51 0.00 6.46
4639 5430 1.021920 GTGAGGGAGAGAAAAGCGGC 61.022 60.000 0.00 0.00 0.00 6.53
4640 5431 0.391793 GGTGAGGGAGAGAAAAGCGG 60.392 60.000 0.00 0.00 0.00 5.52
4641 5432 0.321671 TGGTGAGGGAGAGAAAAGCG 59.678 55.000 0.00 0.00 0.00 4.68
4642 5433 2.568623 TTGGTGAGGGAGAGAAAAGC 57.431 50.000 0.00 0.00 0.00 3.51
4643 5434 4.013050 GGATTTGGTGAGGGAGAGAAAAG 58.987 47.826 0.00 0.00 0.00 2.27
4644 5435 3.397618 TGGATTTGGTGAGGGAGAGAAAA 59.602 43.478 0.00 0.00 0.00 2.29
4645 5436 2.986019 TGGATTTGGTGAGGGAGAGAAA 59.014 45.455 0.00 0.00 0.00 2.52
4646 5437 2.631384 TGGATTTGGTGAGGGAGAGAA 58.369 47.619 0.00 0.00 0.00 2.87
4647 5438 2.342406 TGGATTTGGTGAGGGAGAGA 57.658 50.000 0.00 0.00 0.00 3.10
4648 5439 3.439857 TTTGGATTTGGTGAGGGAGAG 57.560 47.619 0.00 0.00 0.00 3.20
4649 5440 3.496331 GTTTTGGATTTGGTGAGGGAGA 58.504 45.455 0.00 0.00 0.00 3.71
4650 5441 2.228822 CGTTTTGGATTTGGTGAGGGAG 59.771 50.000 0.00 0.00 0.00 4.30
4651 5442 2.235016 CGTTTTGGATTTGGTGAGGGA 58.765 47.619 0.00 0.00 0.00 4.20
4652 5443 1.272212 CCGTTTTGGATTTGGTGAGGG 59.728 52.381 0.00 0.00 42.00 4.30
4653 5444 1.272212 CCCGTTTTGGATTTGGTGAGG 59.728 52.381 0.00 0.00 42.00 3.86
4654 5445 2.228822 CTCCCGTTTTGGATTTGGTGAG 59.771 50.000 0.00 0.00 42.00 3.51
4655 5446 2.235016 CTCCCGTTTTGGATTTGGTGA 58.765 47.619 0.00 0.00 42.00 4.02
4656 5447 1.336795 GCTCCCGTTTTGGATTTGGTG 60.337 52.381 0.00 0.00 42.00 4.17
4657 5448 0.966179 GCTCCCGTTTTGGATTTGGT 59.034 50.000 0.00 0.00 42.00 3.67
4658 5449 1.202348 GAGCTCCCGTTTTGGATTTGG 59.798 52.381 0.87 0.00 42.00 3.28
4659 5450 1.135689 CGAGCTCCCGTTTTGGATTTG 60.136 52.381 8.47 0.00 42.00 2.32
4660 5451 1.165270 CGAGCTCCCGTTTTGGATTT 58.835 50.000 8.47 0.00 42.00 2.17
4661 5452 0.323629 TCGAGCTCCCGTTTTGGATT 59.676 50.000 8.47 0.00 42.00 3.01
4662 5453 0.108138 CTCGAGCTCCCGTTTTGGAT 60.108 55.000 8.47 0.00 42.00 3.41
4663 5454 1.183030 TCTCGAGCTCCCGTTTTGGA 61.183 55.000 7.81 0.00 42.00 3.53
4664 5455 0.320421 TTCTCGAGCTCCCGTTTTGG 60.320 55.000 7.81 0.00 37.55 3.28
4665 5456 1.508632 TTTCTCGAGCTCCCGTTTTG 58.491 50.000 7.81 0.00 0.00 2.44
4666 5457 2.076863 CATTTCTCGAGCTCCCGTTTT 58.923 47.619 7.81 0.00 0.00 2.43
4667 5458 1.726853 CATTTCTCGAGCTCCCGTTT 58.273 50.000 7.81 0.00 0.00 3.60
4668 5459 0.741221 GCATTTCTCGAGCTCCCGTT 60.741 55.000 7.81 0.00 0.00 4.44
4669 5460 1.153549 GCATTTCTCGAGCTCCCGT 60.154 57.895 7.81 0.00 0.00 5.28
4670 5461 0.740868 TTGCATTTCTCGAGCTCCCG 60.741 55.000 7.81 0.00 0.00 5.14
4671 5462 1.453155 TTTGCATTTCTCGAGCTCCC 58.547 50.000 7.81 0.00 0.00 4.30
4672 5463 3.772060 AATTTGCATTTCTCGAGCTCC 57.228 42.857 7.81 0.00 0.00 4.70
4673 5464 4.560427 GGAAAATTTGCATTTCTCGAGCTC 59.440 41.667 7.81 2.73 37.06 4.09
4674 5465 4.022068 TGGAAAATTTGCATTTCTCGAGCT 60.022 37.500 7.81 0.00 37.06 4.09
4675 5466 4.236935 TGGAAAATTTGCATTTCTCGAGC 58.763 39.130 7.81 0.00 37.06 5.03
4676 5467 5.702865 TCTGGAAAATTTGCATTTCTCGAG 58.297 37.500 5.93 5.93 37.06 4.04
4677 5468 5.335897 CCTCTGGAAAATTTGCATTTCTCGA 60.336 40.000 10.28 6.91 37.06 4.04
4678 5469 4.860907 CCTCTGGAAAATTTGCATTTCTCG 59.139 41.667 10.28 3.69 37.06 4.04
4679 5470 6.029346 TCCTCTGGAAAATTTGCATTTCTC 57.971 37.500 10.28 3.19 37.06 2.87
4680 5471 6.423776 TTCCTCTGGAAAATTTGCATTTCT 57.576 33.333 10.28 0.00 38.93 2.52
4693 5484 1.296715 GCGCTCCTTTCCTCTGGAA 59.703 57.895 0.00 0.00 40.27 3.53
4694 5485 1.267574 ATGCGCTCCTTTCCTCTGGA 61.268 55.000 9.73 0.00 0.00 3.86
4695 5486 1.094073 CATGCGCTCCTTTCCTCTGG 61.094 60.000 9.73 0.00 0.00 3.86
4696 5487 1.094073 CCATGCGCTCCTTTCCTCTG 61.094 60.000 9.73 0.00 0.00 3.35
4697 5488 1.222936 CCATGCGCTCCTTTCCTCT 59.777 57.895 9.73 0.00 0.00 3.69
4698 5489 2.476320 GCCATGCGCTCCTTTCCTC 61.476 63.158 9.73 0.00 0.00 3.71
4699 5490 2.439156 GCCATGCGCTCCTTTCCT 60.439 61.111 9.73 0.00 0.00 3.36
4700 5491 2.751436 TGCCATGCGCTCCTTTCC 60.751 61.111 9.73 0.00 38.78 3.13
4701 5492 2.486966 GTGCCATGCGCTCCTTTC 59.513 61.111 9.73 0.00 38.78 2.62
4702 5493 3.434319 CGTGCCATGCGCTCCTTT 61.434 61.111 9.73 0.00 36.86 3.11
4708 5499 3.340953 AATTGACCGTGCCATGCGC 62.341 57.895 0.00 0.00 35.52 6.09
4709 5500 1.514657 CAATTGACCGTGCCATGCG 60.515 57.895 0.00 0.00 0.00 4.73
4710 5501 0.456653 GACAATTGACCGTGCCATGC 60.457 55.000 13.59 0.00 0.00 4.06
4711 5502 0.880441 TGACAATTGACCGTGCCATG 59.120 50.000 13.59 0.00 0.00 3.66
4712 5503 1.838112 ATGACAATTGACCGTGCCAT 58.162 45.000 13.59 1.32 0.00 4.40
4713 5504 1.614996 AATGACAATTGACCGTGCCA 58.385 45.000 13.59 0.00 0.00 4.92
4714 5505 2.723124 AAATGACAATTGACCGTGCC 57.277 45.000 13.59 0.00 0.00 5.01
4715 5506 2.986479 GGAAAATGACAATTGACCGTGC 59.014 45.455 13.59 0.00 0.00 5.34
4716 5507 3.255642 AGGGAAAATGACAATTGACCGTG 59.744 43.478 13.59 0.00 0.00 4.94
4717 5508 3.496331 AGGGAAAATGACAATTGACCGT 58.504 40.909 13.59 2.02 0.00 4.83
4718 5509 4.519540 AAGGGAAAATGACAATTGACCG 57.480 40.909 13.59 0.00 0.00 4.79
4719 5510 5.852827 TGAAAGGGAAAATGACAATTGACC 58.147 37.500 13.59 4.08 0.00 4.02
4720 5511 7.153985 TCATGAAAGGGAAAATGACAATTGAC 58.846 34.615 13.59 6.72 0.00 3.18
4721 5512 7.015487 ACTCATGAAAGGGAAAATGACAATTGA 59.985 33.333 13.59 0.00 0.00 2.57
4722 5513 7.117236 CACTCATGAAAGGGAAAATGACAATTG 59.883 37.037 3.24 3.24 0.00 2.32
4723 5514 7.015487 TCACTCATGAAAGGGAAAATGACAATT 59.985 33.333 0.00 0.00 0.00 2.32
4724 5515 6.494491 TCACTCATGAAAGGGAAAATGACAAT 59.506 34.615 0.00 0.00 0.00 2.71
4725 5516 5.832595 TCACTCATGAAAGGGAAAATGACAA 59.167 36.000 0.00 0.00 0.00 3.18
4726 5517 5.384336 TCACTCATGAAAGGGAAAATGACA 58.616 37.500 0.00 0.00 0.00 3.58
4727 5518 5.964958 TCACTCATGAAAGGGAAAATGAC 57.035 39.130 0.00 0.00 0.00 3.06
4728 5519 6.494491 ACAATCACTCATGAAAGGGAAAATGA 59.506 34.615 0.00 0.00 38.69 2.57
4729 5520 6.694447 ACAATCACTCATGAAAGGGAAAATG 58.306 36.000 0.00 0.00 38.69 2.32
4730 5521 6.923199 ACAATCACTCATGAAAGGGAAAAT 57.077 33.333 0.00 0.00 38.69 1.82
4731 5522 6.729690 AACAATCACTCATGAAAGGGAAAA 57.270 33.333 0.00 0.00 38.69 2.29
4732 5523 6.434028 CCTAACAATCACTCATGAAAGGGAAA 59.566 38.462 0.00 0.00 38.69 3.13
4733 5524 5.945784 CCTAACAATCACTCATGAAAGGGAA 59.054 40.000 0.00 0.00 38.69 3.97
4734 5525 5.500234 CCTAACAATCACTCATGAAAGGGA 58.500 41.667 0.00 0.00 38.69 4.20
4735 5526 4.096984 GCCTAACAATCACTCATGAAAGGG 59.903 45.833 0.00 0.00 38.69 3.95
4736 5527 4.201851 CGCCTAACAATCACTCATGAAAGG 60.202 45.833 0.00 0.00 38.69 3.11
4737 5528 4.201851 CCGCCTAACAATCACTCATGAAAG 60.202 45.833 0.00 0.00 38.69 2.62
4738 5529 3.689161 CCGCCTAACAATCACTCATGAAA 59.311 43.478 0.00 0.00 38.69 2.69
4739 5530 3.270027 CCGCCTAACAATCACTCATGAA 58.730 45.455 0.00 0.00 38.69 2.57
4740 5531 2.236146 ACCGCCTAACAATCACTCATGA 59.764 45.455 0.00 0.00 39.83 3.07
4741 5532 2.609459 GACCGCCTAACAATCACTCATG 59.391 50.000 0.00 0.00 0.00 3.07
4742 5533 2.236146 TGACCGCCTAACAATCACTCAT 59.764 45.455 0.00 0.00 0.00 2.90
4743 5534 1.621317 TGACCGCCTAACAATCACTCA 59.379 47.619 0.00 0.00 0.00 3.41
4744 5535 2.380084 TGACCGCCTAACAATCACTC 57.620 50.000 0.00 0.00 0.00 3.51
4745 5536 2.420129 GGATGACCGCCTAACAATCACT 60.420 50.000 0.00 0.00 0.00 3.41
4746 5537 1.940613 GGATGACCGCCTAACAATCAC 59.059 52.381 0.00 0.00 0.00 3.06
4747 5538 2.325583 GGATGACCGCCTAACAATCA 57.674 50.000 0.00 0.00 0.00 2.57
4759 5550 0.179097 GCTCTGAGGTTCGGATGACC 60.179 60.000 6.83 0.00 37.44 4.02
4760 5551 0.179097 GGCTCTGAGGTTCGGATGAC 60.179 60.000 6.83 0.00 30.24 3.06
4761 5552 0.614697 TGGCTCTGAGGTTCGGATGA 60.615 55.000 6.83 0.00 30.24 2.92
4762 5553 0.460987 GTGGCTCTGAGGTTCGGATG 60.461 60.000 6.83 0.00 30.24 3.51
4763 5554 1.617947 GGTGGCTCTGAGGTTCGGAT 61.618 60.000 6.83 0.00 30.24 4.18
4764 5555 2.283529 GGTGGCTCTGAGGTTCGGA 61.284 63.158 6.83 0.00 0.00 4.55
4765 5556 2.266055 GGTGGCTCTGAGGTTCGG 59.734 66.667 6.83 0.00 0.00 4.30
4766 5557 2.125912 CGGTGGCTCTGAGGTTCG 60.126 66.667 6.83 0.00 0.00 3.95
4767 5558 2.266055 CCGGTGGCTCTGAGGTTC 59.734 66.667 6.83 0.00 0.00 3.62
4768 5559 2.741878 TACCCGGTGGCTCTGAGGTT 62.742 60.000 6.83 0.00 33.59 3.50
4769 5560 3.233919 TACCCGGTGGCTCTGAGGT 62.234 63.158 6.83 11.52 33.59 3.85
4770 5561 2.363795 TACCCGGTGGCTCTGAGG 60.364 66.667 6.83 0.00 33.59 3.86
4771 5562 1.379977 TCTACCCGGTGGCTCTGAG 60.380 63.158 0.00 0.00 33.59 3.35
4772 5563 1.379977 CTCTACCCGGTGGCTCTGA 60.380 63.158 0.00 0.00 33.59 3.27
4773 5564 0.970937 TTCTCTACCCGGTGGCTCTG 60.971 60.000 0.00 0.00 33.59 3.35
4774 5565 0.252103 TTTCTCTACCCGGTGGCTCT 60.252 55.000 0.00 0.00 33.59 4.09
4775 5566 0.108281 GTTTCTCTACCCGGTGGCTC 60.108 60.000 0.00 0.00 33.59 4.70
4776 5567 1.551019 GGTTTCTCTACCCGGTGGCT 61.551 60.000 0.00 0.00 33.59 4.75
4777 5568 1.078637 GGTTTCTCTACCCGGTGGC 60.079 63.158 0.00 0.00 33.59 5.01
4784 5575 1.408340 GCCGACTAGGGTTTCTCTACC 59.592 57.143 0.00 0.00 41.48 3.18
4785 5576 2.867287 GCCGACTAGGGTTTCTCTAC 57.133 55.000 0.00 0.00 41.48 2.59
4796 5587 1.381928 TTGCGACCCTAGCCGACTAG 61.382 60.000 0.00 0.00 44.80 2.57
4797 5588 0.966875 TTTGCGACCCTAGCCGACTA 60.967 55.000 0.00 0.00 0.00 2.59
4798 5589 2.280552 TTTGCGACCCTAGCCGACT 61.281 57.895 0.00 0.00 0.00 4.18
4799 5590 2.098831 GTTTGCGACCCTAGCCGAC 61.099 63.158 0.00 0.00 0.00 4.79
4800 5591 2.263540 GTTTGCGACCCTAGCCGA 59.736 61.111 0.00 0.00 0.00 5.54
4801 5592 2.047655 TGTTTGCGACCCTAGCCG 60.048 61.111 0.00 0.00 0.00 5.52
4802 5593 1.295423 TCTGTTTGCGACCCTAGCC 59.705 57.895 0.00 0.00 0.00 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.