Multiple sequence alignment - TraesCS3D01G086200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G086200 chr3D 100.000 3937 0 0 1 3937 43737718 43741654 0.000000e+00 7271.0
1 TraesCS3D01G086200 chr3D 91.349 2231 127 24 840 3022 43719197 43721409 0.000000e+00 2990.0
2 TraesCS3D01G086200 chr3D 90.135 1115 78 17 1937 3022 43538625 43539736 0.000000e+00 1421.0
3 TraesCS3D01G086200 chr3D 93.795 838 45 5 4 836 603397606 603396771 0.000000e+00 1253.0
4 TraesCS3D01G086200 chr3D 92.632 855 46 7 1 843 565161893 565162742 0.000000e+00 1214.0
5 TraesCS3D01G086200 chr3D 93.500 200 13 0 3694 3893 378782683 378782484 8.270000e-77 298.0
6 TraesCS3D01G086200 chr3D 93.532 201 12 1 3693 3893 384559371 384559570 8.270000e-77 298.0
7 TraesCS3D01G086200 chr3D 96.154 130 4 1 3181 3309 43721407 43721536 1.110000e-50 211.0
8 TraesCS3D01G086200 chr3D 93.233 133 9 0 3181 3313 43539734 43539866 3.100000e-46 196.0
9 TraesCS3D01G086200 chr3A 92.269 2160 109 23 899 3021 55708080 55705942 0.000000e+00 3011.0
10 TraesCS3D01G086200 chr3A 93.939 198 12 0 3696 3893 690792974 690792777 2.300000e-77 300.0
11 TraesCS3D01G086200 chr3A 89.222 167 18 0 3016 3182 144451179 144451345 3.990000e-50 209.0
12 TraesCS3D01G086200 chr3A 96.386 83 3 0 3285 3367 55704815 55704733 1.910000e-28 137.0
13 TraesCS3D01G086200 chr3B 93.627 1114 45 7 1935 3022 68428612 68427499 0.000000e+00 1640.0
14 TraesCS3D01G086200 chr3B 93.412 1017 57 2 881 1894 68429621 68428612 0.000000e+00 1498.0
15 TraesCS3D01G086200 chr3B 91.798 317 21 4 3385 3700 68419228 68418916 1.680000e-118 436.0
16 TraesCS3D01G086200 chr3B 97.087 206 6 0 3181 3386 68427501 68427296 8.100000e-92 348.0
17 TraesCS3D01G086200 chr3B 82.154 325 26 13 902 1215 67946826 67947129 2.350000e-62 250.0
18 TraesCS3D01G086200 chr6D 93.660 836 46 3 6 836 462823665 462822832 0.000000e+00 1243.0
19 TraesCS3D01G086200 chr6D 90.230 174 15 2 3010 3182 362257974 362258146 3.960000e-55 226.0
20 TraesCS3D01G086200 chr7D 93.452 840 42 5 4 836 136988109 136987276 0.000000e+00 1234.0
21 TraesCS3D01G086200 chr7D 93.214 840 53 1 1 836 575586098 575586937 0.000000e+00 1232.0
22 TraesCS3D01G086200 chr7D 77.964 835 142 30 1094 1895 568067022 568067847 5.910000e-133 484.0
23 TraesCS3D01G086200 chr7D 92.727 165 12 0 3018 3182 181792400 181792564 5.080000e-59 239.0
24 TraesCS3D01G086200 chr7D 93.210 162 10 1 3019 3179 18596693 18596854 1.830000e-58 237.0
25 TraesCS3D01G086200 chr1D 93.341 841 47 5 1 836 29728551 29729387 0.000000e+00 1234.0
26 TraesCS3D01G086200 chr1D 92.645 843 57 1 4 841 252824107 252823265 0.000000e+00 1208.0
27 TraesCS3D01G086200 chr1D 92.593 837 54 8 4 836 465149665 465148833 0.000000e+00 1195.0
28 TraesCS3D01G086200 chr1D 93.939 165 10 0 3019 3183 370219050 370219214 2.350000e-62 250.0
29 TraesCS3D01G086200 chr2D 93.317 838 45 3 4 836 125736869 125736038 0.000000e+00 1227.0
30 TraesCS3D01G086200 chr2D 77.898 923 166 23 1001 1895 535582358 535581446 1.240000e-149 540.0
31 TraesCS3D01G086200 chr2D 92.638 163 12 0 3023 3185 368528650 368528488 6.580000e-58 235.0
32 TraesCS3D01G086200 chr2B 78.309 816 154 17 1093 1895 636823101 636822296 4.540000e-139 505.0
33 TraesCS3D01G086200 chr2B 78.582 677 113 23 1092 1752 52717070 52717730 6.080000e-113 418.0
34 TraesCS3D01G086200 chr6B 92.823 209 14 1 3691 3898 663866460 663866252 6.390000e-78 302.0
35 TraesCS3D01G086200 chr6B 88.506 174 18 2 3010 3182 678534693 678534521 3.990000e-50 209.0
36 TraesCS3D01G086200 chr6B 94.000 50 3 0 2272 2321 432362208 432362159 4.220000e-10 76.8
37 TraesCS3D01G086200 chr1A 93.939 198 12 0 3696 3893 586372927 586372730 2.300000e-77 300.0
38 TraesCS3D01G086200 chr4D 92.965 199 14 0 3695 3893 483990745 483990943 1.380000e-74 291.0
39 TraesCS3D01G086200 chr6A 92.537 201 15 0 3693 3893 576665499 576665699 4.980000e-74 289.0
40 TraesCS3D01G086200 chr5B 92.574 202 14 1 3698 3898 621833962 621833761 4.980000e-74 289.0
41 TraesCS3D01G086200 chr7A 92.537 201 13 2 3695 3893 521802173 521802373 1.790000e-73 287.0
42 TraesCS3D01G086200 chr4B 87.912 182 17 4 3006 3183 406389278 406389458 3.990000e-50 209.0
43 TraesCS3D01G086200 chr5D 85.938 192 20 6 2992 3182 230417016 230416831 8.630000e-47 198.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G086200 chr3D 43737718 43741654 3936 False 7271.0 7271 100.000000 1 3937 1 chr3D.!!$F1 3936
1 TraesCS3D01G086200 chr3D 43719197 43721536 2339 False 1600.5 2990 93.751500 840 3309 2 chr3D.!!$F5 2469
2 TraesCS3D01G086200 chr3D 603396771 603397606 835 True 1253.0 1253 93.795000 4 836 1 chr3D.!!$R2 832
3 TraesCS3D01G086200 chr3D 565161893 565162742 849 False 1214.0 1214 92.632000 1 843 1 chr3D.!!$F3 842
4 TraesCS3D01G086200 chr3D 43538625 43539866 1241 False 808.5 1421 91.684000 1937 3313 2 chr3D.!!$F4 1376
5 TraesCS3D01G086200 chr3A 55704733 55708080 3347 True 1574.0 3011 94.327500 899 3367 2 chr3A.!!$R2 2468
6 TraesCS3D01G086200 chr3B 68427296 68429621 2325 True 1162.0 1640 94.708667 881 3386 3 chr3B.!!$R2 2505
7 TraesCS3D01G086200 chr6D 462822832 462823665 833 True 1243.0 1243 93.660000 6 836 1 chr6D.!!$R1 830
8 TraesCS3D01G086200 chr7D 136987276 136988109 833 True 1234.0 1234 93.452000 4 836 1 chr7D.!!$R1 832
9 TraesCS3D01G086200 chr7D 575586098 575586937 839 False 1232.0 1232 93.214000 1 836 1 chr7D.!!$F4 835
10 TraesCS3D01G086200 chr7D 568067022 568067847 825 False 484.0 484 77.964000 1094 1895 1 chr7D.!!$F3 801
11 TraesCS3D01G086200 chr1D 29728551 29729387 836 False 1234.0 1234 93.341000 1 836 1 chr1D.!!$F1 835
12 TraesCS3D01G086200 chr1D 252823265 252824107 842 True 1208.0 1208 92.645000 4 841 1 chr1D.!!$R1 837
13 TraesCS3D01G086200 chr1D 465148833 465149665 832 True 1195.0 1195 92.593000 4 836 1 chr1D.!!$R2 832
14 TraesCS3D01G086200 chr2D 125736038 125736869 831 True 1227.0 1227 93.317000 4 836 1 chr2D.!!$R1 832
15 TraesCS3D01G086200 chr2D 535581446 535582358 912 True 540.0 540 77.898000 1001 1895 1 chr2D.!!$R3 894
16 TraesCS3D01G086200 chr2B 636822296 636823101 805 True 505.0 505 78.309000 1093 1895 1 chr2B.!!$R1 802
17 TraesCS3D01G086200 chr2B 52717070 52717730 660 False 418.0 418 78.582000 1092 1752 1 chr2B.!!$F1 660

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
787 809 0.460284 CAATCTAGCACCGGTTCGCT 60.460 55.0 21.67 21.67 42.34 4.93 F
1895 1997 0.108615 GCAGTCATAGCGGTGAGTGT 60.109 55.0 22.05 0.19 46.47 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2616 2759 0.172352 CTGAACTCCTCTGCGTCCTC 59.828 60.0 0.0 0.0 0.0 3.71 R
3676 4848 0.169009 GCGATGTGGTTTGGAGAAGC 59.831 55.0 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 124 1.856802 GCAACAAAGGTGCCAAGAAG 58.143 50.000 0.00 0.00 0.00 2.85
119 125 1.538849 GCAACAAAGGTGCCAAGAAGG 60.539 52.381 0.00 0.00 41.84 3.46
411 417 1.005215 CATCCTGAACCAGCTTCCCTT 59.995 52.381 0.00 0.00 0.00 3.95
501 519 2.749044 CCGCAGCACAGAAGCCAT 60.749 61.111 0.00 0.00 34.23 4.40
503 521 2.330372 CGCAGCACAGAAGCCATGT 61.330 57.895 0.00 0.00 34.23 3.21
529 547 3.160585 CCAAGCACAGAGACCCCA 58.839 61.111 0.00 0.00 0.00 4.96
565 583 4.595538 ACTTCACCGACGCCGCAA 62.596 61.111 0.00 0.00 0.00 4.85
756 777 1.990060 GTGGCTGGGAGCTAGGTCA 60.990 63.158 22.66 3.78 41.99 4.02
777 799 2.386100 CCCAGGGGCCAATCTAGCA 61.386 63.158 4.39 0.00 0.00 3.49
787 809 0.460284 CAATCTAGCACCGGTTCGCT 60.460 55.000 21.67 21.67 42.34 4.93
802 829 2.667318 CGCTGCCGCTCTTTTTCGA 61.667 57.895 0.00 0.00 0.00 3.71
836 863 0.809241 GAACGGCTGGAGATGCTCTG 60.809 60.000 0.00 0.00 0.00 3.35
855 882 3.056536 TCTGACACAGAGCACTCCATAAC 60.057 47.826 0.00 0.00 35.39 1.89
873 900 3.837213 AACGGACAAATCAAGCATCAG 57.163 42.857 0.00 0.00 0.00 2.90
894 927 4.280174 CAGGAATGGCTAAATTGGATCCTG 59.720 45.833 14.23 4.29 44.60 3.86
962 997 4.156739 GCTCTTCATCCCAAGTAAAACAGG 59.843 45.833 0.00 0.00 0.00 4.00
1038 1076 1.619977 GCCCTCCTGTTCCTCTCACTA 60.620 57.143 0.00 0.00 0.00 2.74
1293 1355 0.603569 AGGACATCAACTTCGCGTCT 59.396 50.000 5.77 0.00 0.00 4.18
1483 1554 2.124860 TCGAGACGATCCGCTCCA 60.125 61.111 0.00 0.00 30.64 3.86
1551 1622 1.591594 CACGAACACTGTCACGGCT 60.592 57.895 11.52 0.00 0.00 5.52
1752 1823 3.244561 ACACGGTCCTTGACAAGATCATT 60.245 43.478 16.99 0.00 37.11 2.57
1755 1826 3.084039 GGTCCTTGACAAGATCATTGCA 58.916 45.455 16.99 0.00 37.11 4.08
1895 1997 0.108615 GCAGTCATAGCGGTGAGTGT 60.109 55.000 22.05 0.19 46.47 3.55
1896 1998 1.633561 CAGTCATAGCGGTGAGTGTG 58.366 55.000 16.46 3.67 42.13 3.82
1899 2001 0.817654 TCATAGCGGTGAGTGTGGAG 59.182 55.000 0.00 0.00 0.00 3.86
1902 2004 1.532604 TAGCGGTGAGTGTGGAGTGG 61.533 60.000 0.00 0.00 0.00 4.00
1908 2010 3.428999 CGGTGAGTGTGGAGTGGTAATAG 60.429 52.174 0.00 0.00 0.00 1.73
1973 2079 3.187022 TCATCTTTGTGCATGTCAACTCG 59.813 43.478 0.00 0.00 0.00 4.18
2059 2170 4.100529 CAGAAATATTTCAGCAAGCACCG 58.899 43.478 26.02 2.27 39.61 4.94
2067 2184 4.355543 TTCAGCAAGCACCGAATAAATC 57.644 40.909 0.00 0.00 0.00 2.17
2087 2204 5.698741 ATCCAATCAATACCAGTGACTCA 57.301 39.130 0.00 0.00 0.00 3.41
2263 2405 7.869800 AGACATCTCATTGAAAGTGAAAACTC 58.130 34.615 0.00 0.00 0.00 3.01
2275 2417 4.265073 AGTGAAAACTCTGCTTTGTGACT 58.735 39.130 0.00 0.00 0.00 3.41
2359 2502 0.744874 TCGGAGCTCATAAGGAACCG 59.255 55.000 17.19 7.23 37.79 4.44
2384 2527 1.907807 AATGGCCAAGGCGCAGAAA 60.908 52.632 10.96 0.00 43.06 2.52
2901 3044 1.214367 GTCACCGTATAATGTGCCGG 58.786 55.000 0.00 0.00 45.72 6.13
2938 3081 2.854963 TGACTGCAAAGCTCACTGATT 58.145 42.857 0.00 0.00 0.00 2.57
2942 3085 3.231965 CTGCAAAGCTCACTGATTTTCG 58.768 45.455 0.00 0.00 31.16 3.46
3030 3178 7.427989 TCATTTTAGTTACTATTCCCTCCGT 57.572 36.000 0.00 0.00 0.00 4.69
3031 3179 7.854337 TCATTTTAGTTACTATTCCCTCCGTT 58.146 34.615 0.00 0.00 0.00 4.44
3032 3180 8.323567 TCATTTTAGTTACTATTCCCTCCGTTT 58.676 33.333 0.00 0.00 0.00 3.60
3033 3181 8.610035 CATTTTAGTTACTATTCCCTCCGTTTC 58.390 37.037 0.00 0.00 0.00 2.78
3034 3182 7.486407 TTTAGTTACTATTCCCTCCGTTTCT 57.514 36.000 0.00 0.00 0.00 2.52
3035 3183 8.593945 TTTAGTTACTATTCCCTCCGTTTCTA 57.406 34.615 0.00 0.00 0.00 2.10
3036 3184 8.593945 TTAGTTACTATTCCCTCCGTTTCTAA 57.406 34.615 0.00 0.00 0.00 2.10
3037 3185 7.486407 AGTTACTATTCCCTCCGTTTCTAAA 57.514 36.000 0.00 0.00 0.00 1.85
3038 3186 8.087303 AGTTACTATTCCCTCCGTTTCTAAAT 57.913 34.615 0.00 0.00 0.00 1.40
3039 3187 7.985752 AGTTACTATTCCCTCCGTTTCTAAATG 59.014 37.037 0.00 0.00 0.00 2.32
3040 3188 6.309389 ACTATTCCCTCCGTTTCTAAATGT 57.691 37.500 0.00 0.00 0.00 2.71
3041 3189 7.427989 ACTATTCCCTCCGTTTCTAAATGTA 57.572 36.000 0.00 0.00 0.00 2.29
3042 3190 7.854337 ACTATTCCCTCCGTTTCTAAATGTAA 58.146 34.615 0.00 0.00 0.00 2.41
3043 3191 7.985752 ACTATTCCCTCCGTTTCTAAATGTAAG 59.014 37.037 0.00 0.00 0.00 2.34
3044 3192 5.750352 TCCCTCCGTTTCTAAATGTAAGT 57.250 39.130 0.00 0.00 0.00 2.24
3045 3193 5.727434 TCCCTCCGTTTCTAAATGTAAGTC 58.273 41.667 0.00 0.00 0.00 3.01
3046 3194 5.482878 TCCCTCCGTTTCTAAATGTAAGTCT 59.517 40.000 0.00 0.00 0.00 3.24
3047 3195 6.013984 TCCCTCCGTTTCTAAATGTAAGTCTT 60.014 38.462 0.00 0.00 0.00 3.01
3048 3196 6.653740 CCCTCCGTTTCTAAATGTAAGTCTTT 59.346 38.462 0.00 0.00 0.00 2.52
3049 3197 7.148457 CCCTCCGTTTCTAAATGTAAGTCTTTC 60.148 40.741 0.00 0.00 0.00 2.62
3050 3198 7.603024 CCTCCGTTTCTAAATGTAAGTCTTTCT 59.397 37.037 0.00 0.00 0.00 2.52
3051 3199 9.635520 CTCCGTTTCTAAATGTAAGTCTTTCTA 57.364 33.333 0.00 0.00 0.00 2.10
3052 3200 9.985730 TCCGTTTCTAAATGTAAGTCTTTCTAA 57.014 29.630 0.00 0.00 0.00 2.10
3077 3225 9.458374 AAAGATTTCAATACAAACTACAAACGG 57.542 29.630 0.00 0.00 0.00 4.44
3078 3226 8.385898 AGATTTCAATACAAACTACAAACGGA 57.614 30.769 0.00 0.00 0.00 4.69
3079 3227 9.010029 AGATTTCAATACAAACTACAAACGGAT 57.990 29.630 0.00 0.00 0.00 4.18
3080 3228 8.964420 ATTTCAATACAAACTACAAACGGATG 57.036 30.769 0.00 0.00 0.00 3.51
3081 3229 7.499321 TTCAATACAAACTACAAACGGATGT 57.501 32.000 0.96 0.96 37.32 3.06
3082 3230 8.604640 TTCAATACAAACTACAAACGGATGTA 57.395 30.769 3.08 3.08 34.75 2.29
3083 3231 8.780846 TCAATACAAACTACAAACGGATGTAT 57.219 30.769 3.45 0.00 35.37 2.29
3084 3232 8.661257 TCAATACAAACTACAAACGGATGTATG 58.339 33.333 3.45 2.84 35.37 2.39
3085 3233 8.447833 CAATACAAACTACAAACGGATGTATGT 58.552 33.333 10.45 10.45 35.37 2.29
3086 3234 9.656040 AATACAAACTACAAACGGATGTATGTA 57.344 29.630 12.88 12.88 35.19 2.29
3087 3235 7.591006 ACAAACTACAAACGGATGTATGTAG 57.409 36.000 9.55 9.55 46.69 2.74
3088 3236 7.380536 ACAAACTACAAACGGATGTATGTAGA 58.619 34.615 16.22 0.00 45.05 2.59
3089 3237 7.330208 ACAAACTACAAACGGATGTATGTAGAC 59.670 37.037 16.22 0.00 45.05 2.59
3090 3238 6.519679 ACTACAAACGGATGTATGTAGACA 57.480 37.500 16.22 0.00 45.05 3.41
3091 3239 7.108841 ACTACAAACGGATGTATGTAGACAT 57.891 36.000 16.22 0.08 45.05 3.06
3092 3240 8.229253 ACTACAAACGGATGTATGTAGACATA 57.771 34.615 16.22 0.00 45.05 2.29
3093 3241 8.689061 ACTACAAACGGATGTATGTAGACATAA 58.311 33.333 16.22 0.00 45.05 1.90
3094 3242 9.692749 CTACAAACGGATGTATGTAGACATAAT 57.307 33.333 3.96 1.66 45.05 1.28
3095 3243 8.958119 ACAAACGGATGTATGTAGACATAATT 57.042 30.769 3.96 0.00 40.18 1.40
3096 3244 9.391006 ACAAACGGATGTATGTAGACATAATTT 57.609 29.630 3.96 0.00 40.18 1.82
3123 3271 6.410540 AGTGTAGATTCACTCATTTTCCTCC 58.589 40.000 0.00 0.00 44.07 4.30
3124 3272 5.292101 GTGTAGATTCACTCATTTTCCTCCG 59.708 44.000 0.00 0.00 35.68 4.63
3125 3273 4.559862 AGATTCACTCATTTTCCTCCGT 57.440 40.909 0.00 0.00 0.00 4.69
3126 3274 5.677319 AGATTCACTCATTTTCCTCCGTA 57.323 39.130 0.00 0.00 0.00 4.02
3127 3275 6.240549 AGATTCACTCATTTTCCTCCGTAT 57.759 37.500 0.00 0.00 0.00 3.06
3128 3276 6.051717 AGATTCACTCATTTTCCTCCGTATG 58.948 40.000 0.00 0.00 0.00 2.39
3129 3277 4.819105 TCACTCATTTTCCTCCGTATGT 57.181 40.909 0.00 0.00 0.00 2.29
3130 3278 5.925506 TCACTCATTTTCCTCCGTATGTA 57.074 39.130 0.00 0.00 0.00 2.29
3131 3279 5.902681 TCACTCATTTTCCTCCGTATGTAG 58.097 41.667 0.00 0.00 0.00 2.74
3132 3280 5.421056 TCACTCATTTTCCTCCGTATGTAGT 59.579 40.000 0.00 0.00 0.00 2.73
3133 3281 6.070995 TCACTCATTTTCCTCCGTATGTAGTT 60.071 38.462 0.00 0.00 0.00 2.24
3134 3282 7.123098 TCACTCATTTTCCTCCGTATGTAGTTA 59.877 37.037 0.00 0.00 0.00 2.24
3135 3283 7.926555 CACTCATTTTCCTCCGTATGTAGTTAT 59.073 37.037 0.00 0.00 0.00 1.89
3136 3284 8.483758 ACTCATTTTCCTCCGTATGTAGTTATT 58.516 33.333 0.00 0.00 0.00 1.40
3137 3285 9.326413 CTCATTTTCCTCCGTATGTAGTTATTT 57.674 33.333 0.00 0.00 0.00 1.40
3176 3324 9.198475 AGAAAGACTTATATTTAGGAACGGAGA 57.802 33.333 0.00 0.00 0.00 3.71
3177 3325 9.813446 GAAAGACTTATATTTAGGAACGGAGAA 57.187 33.333 0.00 0.00 0.00 2.87
3179 3327 9.819267 AAGACTTATATTTAGGAACGGAGAAAG 57.181 33.333 0.00 0.00 0.00 2.62
3180 3328 8.979534 AGACTTATATTTAGGAACGGAGAAAGT 58.020 33.333 0.00 0.00 0.00 2.66
3188 3336 3.388350 AGGAACGGAGAAAGTATCATCCC 59.612 47.826 0.00 0.00 0.00 3.85
3364 4536 2.875087 TGGCAGTGCATGATATTTGC 57.125 45.000 18.61 4.99 40.55 3.68
3383 4555 9.700831 ATATTTGCTAGGGAAACACTTCTTATT 57.299 29.630 0.00 0.00 0.00 1.40
3386 4558 5.183140 TGCTAGGGAAACACTTCTTATTTGC 59.817 40.000 0.00 0.00 0.00 3.68
3387 4559 5.183140 GCTAGGGAAACACTTCTTATTTGCA 59.817 40.000 0.00 0.00 0.00 4.08
3388 4560 6.294508 GCTAGGGAAACACTTCTTATTTGCAA 60.295 38.462 0.00 0.00 0.00 4.08
3389 4561 5.842907 AGGGAAACACTTCTTATTTGCAAC 58.157 37.500 0.00 0.00 0.00 4.17
3390 4562 5.598417 AGGGAAACACTTCTTATTTGCAACT 59.402 36.000 0.00 0.00 0.00 3.16
3391 4563 5.691754 GGGAAACACTTCTTATTTGCAACTG 59.308 40.000 0.00 0.00 0.00 3.16
3392 4564 6.460953 GGGAAACACTTCTTATTTGCAACTGA 60.461 38.462 0.00 0.00 0.00 3.41
3393 4565 6.978080 GGAAACACTTCTTATTTGCAACTGAA 59.022 34.615 0.00 0.67 0.00 3.02
3394 4566 7.491048 GGAAACACTTCTTATTTGCAACTGAAA 59.509 33.333 0.00 0.00 0.00 2.69
3395 4567 8.947055 AAACACTTCTTATTTGCAACTGAAAT 57.053 26.923 0.00 0.00 0.00 2.17
3396 4568 8.579682 AACACTTCTTATTTGCAACTGAAATC 57.420 30.769 0.00 0.00 0.00 2.17
3397 4569 7.147976 ACACTTCTTATTTGCAACTGAAATCC 58.852 34.615 0.00 0.00 0.00 3.01
3398 4570 6.306356 CACTTCTTATTTGCAACTGAAATCCG 59.694 38.462 0.00 0.00 0.00 4.18
3399 4571 6.206634 ACTTCTTATTTGCAACTGAAATCCGA 59.793 34.615 0.00 0.00 0.00 4.55
3400 4572 5.938322 TCTTATTTGCAACTGAAATCCGAC 58.062 37.500 0.00 0.00 0.00 4.79
3401 4573 2.679355 TTTGCAACTGAAATCCGACG 57.321 45.000 0.00 0.00 0.00 5.12
3402 4574 0.871722 TTGCAACTGAAATCCGACGG 59.128 50.000 7.84 7.84 0.00 4.79
3403 4575 1.134694 GCAACTGAAATCCGACGGC 59.865 57.895 9.66 0.00 0.00 5.68
3404 4576 1.298859 GCAACTGAAATCCGACGGCT 61.299 55.000 9.66 0.00 0.00 5.52
3405 4577 2.004583 CAACTGAAATCCGACGGCTA 57.995 50.000 9.66 0.00 0.00 3.93
3406 4578 1.659098 CAACTGAAATCCGACGGCTAC 59.341 52.381 9.66 1.19 0.00 3.58
3407 4579 0.175073 ACTGAAATCCGACGGCTACC 59.825 55.000 9.66 0.00 0.00 3.18
3408 4580 0.174845 CTGAAATCCGACGGCTACCA 59.825 55.000 9.66 3.96 0.00 3.25
3409 4581 0.609151 TGAAATCCGACGGCTACCAA 59.391 50.000 9.66 0.00 0.00 3.67
3410 4582 1.002201 TGAAATCCGACGGCTACCAAA 59.998 47.619 9.66 0.00 0.00 3.28
3411 4583 2.285977 GAAATCCGACGGCTACCAAAT 58.714 47.619 9.66 0.00 0.00 2.32
3412 4584 2.413310 AATCCGACGGCTACCAAATT 57.587 45.000 9.66 0.00 0.00 1.82
3413 4585 1.663695 ATCCGACGGCTACCAAATTG 58.336 50.000 9.66 0.00 0.00 2.32
3414 4586 0.322322 TCCGACGGCTACCAAATTGT 59.678 50.000 9.66 0.00 0.00 2.71
3415 4587 0.446222 CCGACGGCTACCAAATTGTG 59.554 55.000 0.00 0.00 0.00 3.33
3416 4588 0.179200 CGACGGCTACCAAATTGTGC 60.179 55.000 0.00 0.00 0.00 4.57
3417 4589 1.165270 GACGGCTACCAAATTGTGCT 58.835 50.000 0.00 0.00 0.00 4.40
3418 4590 1.539827 GACGGCTACCAAATTGTGCTT 59.460 47.619 0.00 0.00 0.00 3.91
3419 4591 1.539827 ACGGCTACCAAATTGTGCTTC 59.460 47.619 0.00 0.00 0.00 3.86
3420 4592 1.812571 CGGCTACCAAATTGTGCTTCT 59.187 47.619 0.00 0.00 0.00 2.85
3421 4593 2.228822 CGGCTACCAAATTGTGCTTCTT 59.771 45.455 0.00 0.00 0.00 2.52
3422 4594 3.438781 CGGCTACCAAATTGTGCTTCTTA 59.561 43.478 0.00 0.00 0.00 2.10
3423 4595 4.096382 CGGCTACCAAATTGTGCTTCTTAT 59.904 41.667 0.00 0.00 0.00 1.73
3424 4596 5.295787 CGGCTACCAAATTGTGCTTCTTATA 59.704 40.000 0.00 0.00 0.00 0.98
3425 4597 6.017109 CGGCTACCAAATTGTGCTTCTTATAT 60.017 38.462 0.00 0.00 0.00 0.86
3426 4598 7.141363 GGCTACCAAATTGTGCTTCTTATATG 58.859 38.462 0.00 0.00 0.00 1.78
3427 4599 7.013274 GGCTACCAAATTGTGCTTCTTATATGA 59.987 37.037 0.00 0.00 0.00 2.15
3428 4600 8.405531 GCTACCAAATTGTGCTTCTTATATGAA 58.594 33.333 1.51 1.51 0.00 2.57
3431 4603 9.995003 ACCAAATTGTGCTTCTTATATGAAAAA 57.005 25.926 2.99 0.00 0.00 1.94
3451 4623 2.871096 AAACGGCAGGGAAGTAATCA 57.129 45.000 0.00 0.00 0.00 2.57
3452 4624 2.109425 AACGGCAGGGAAGTAATCAC 57.891 50.000 0.00 0.00 0.00 3.06
3453 4625 0.252197 ACGGCAGGGAAGTAATCACC 59.748 55.000 0.00 0.00 28.52 4.02
3454 4626 0.463833 CGGCAGGGAAGTAATCACCC 60.464 60.000 0.00 0.00 43.55 4.61
3458 4630 3.080647 GGGAAGTAATCACCCGCAG 57.919 57.895 0.00 0.00 34.03 5.18
3459 4631 1.095807 GGGAAGTAATCACCCGCAGC 61.096 60.000 0.00 0.00 34.03 5.25
3460 4632 1.095807 GGAAGTAATCACCCGCAGCC 61.096 60.000 0.00 0.00 0.00 4.85
3461 4633 1.077716 AAGTAATCACCCGCAGCCC 60.078 57.895 0.00 0.00 0.00 5.19
3462 4634 2.869503 AAGTAATCACCCGCAGCCCG 62.870 60.000 0.00 0.00 0.00 6.13
3463 4635 3.395702 TAATCACCCGCAGCCCGT 61.396 61.111 0.00 0.00 34.38 5.28
3464 4636 3.673956 TAATCACCCGCAGCCCGTG 62.674 63.158 0.78 0.78 34.38 4.94
3469 4641 4.690719 CCCGCAGCCCGTGTGTAA 62.691 66.667 0.00 0.00 34.56 2.41
3470 4642 3.419759 CCGCAGCCCGTGTGTAAC 61.420 66.667 0.00 0.00 34.56 2.50
3486 4658 6.726490 TGTGTAACACTCCCCTAATATCTC 57.274 41.667 0.00 0.00 45.67 2.75
3487 4659 6.441222 TGTGTAACACTCCCCTAATATCTCT 58.559 40.000 0.00 0.00 45.67 3.10
3488 4660 6.550108 TGTGTAACACTCCCCTAATATCTCTC 59.450 42.308 0.00 0.00 45.67 3.20
3489 4661 6.778559 GTGTAACACTCCCCTAATATCTCTCT 59.221 42.308 0.00 0.00 36.32 3.10
3490 4662 7.943447 GTGTAACACTCCCCTAATATCTCTCTA 59.057 40.741 0.00 0.00 36.32 2.43
3491 4663 8.508601 TGTAACACTCCCCTAATATCTCTCTAA 58.491 37.037 0.00 0.00 0.00 2.10
3492 4664 9.364653 GTAACACTCCCCTAATATCTCTCTAAA 57.635 37.037 0.00 0.00 0.00 1.85
3493 4665 8.855804 AACACTCCCCTAATATCTCTCTAAAA 57.144 34.615 0.00 0.00 0.00 1.52
3494 4666 8.855804 ACACTCCCCTAATATCTCTCTAAAAA 57.144 34.615 0.00 0.00 0.00 1.94
3518 4690 9.825109 AAAACTCTACTAATCTCTCCTAATTGC 57.175 33.333 0.00 0.00 0.00 3.56
3519 4691 8.540507 AACTCTACTAATCTCTCCTAATTGCA 57.459 34.615 0.00 0.00 0.00 4.08
3520 4692 8.540507 ACTCTACTAATCTCTCCTAATTGCAA 57.459 34.615 0.00 0.00 0.00 4.08
3521 4693 8.982723 ACTCTACTAATCTCTCCTAATTGCAAA 58.017 33.333 1.71 0.00 0.00 3.68
3522 4694 9.255304 CTCTACTAATCTCTCCTAATTGCAAAC 57.745 37.037 1.71 0.00 0.00 2.93
3523 4695 6.910536 ACTAATCTCTCCTAATTGCAAACG 57.089 37.500 1.71 0.00 0.00 3.60
3524 4696 4.622701 AATCTCTCCTAATTGCAAACGC 57.377 40.909 1.71 0.00 0.00 4.84
3525 4697 3.052455 TCTCTCCTAATTGCAAACGCA 57.948 42.857 1.71 0.00 37.72 5.24
3526 4698 3.002791 TCTCTCCTAATTGCAAACGCAG 58.997 45.455 1.71 0.00 41.34 5.18
3527 4699 1.468520 TCTCCTAATTGCAAACGCAGC 59.531 47.619 1.71 0.00 41.34 5.25
3528 4700 0.525761 TCCTAATTGCAAACGCAGCC 59.474 50.000 1.71 0.00 41.34 4.85
3529 4701 0.798009 CCTAATTGCAAACGCAGCCG 60.798 55.000 1.71 0.00 41.34 5.52
3530 4702 1.405469 CTAATTGCAAACGCAGCCGC 61.405 55.000 1.71 0.00 41.34 6.53
3531 4703 2.134968 TAATTGCAAACGCAGCCGCA 62.135 50.000 1.71 0.00 41.34 5.69
3532 4704 4.921847 TTGCAAACGCAGCCGCAC 62.922 61.111 0.00 0.00 41.34 5.34
3547 4719 4.154347 CACCGGCCTGAGCTCCTC 62.154 72.222 12.15 0.00 39.73 3.71
3550 4722 3.847602 CGGCCTGAGCTCCTCCAG 61.848 72.222 12.15 1.81 39.73 3.86
3587 4759 4.554036 GCCCGCCTCACCCAGATC 62.554 72.222 0.00 0.00 0.00 2.75
3588 4760 2.765807 CCCGCCTCACCCAGATCT 60.766 66.667 0.00 0.00 0.00 2.75
3589 4761 2.801631 CCCGCCTCACCCAGATCTC 61.802 68.421 0.00 0.00 0.00 2.75
3590 4762 1.760086 CCGCCTCACCCAGATCTCT 60.760 63.158 0.00 0.00 0.00 3.10
3591 4763 1.333636 CCGCCTCACCCAGATCTCTT 61.334 60.000 0.00 0.00 0.00 2.85
3592 4764 0.539051 CGCCTCACCCAGATCTCTTT 59.461 55.000 0.00 0.00 0.00 2.52
3593 4765 1.472376 CGCCTCACCCAGATCTCTTTC 60.472 57.143 0.00 0.00 0.00 2.62
3594 4766 1.836802 GCCTCACCCAGATCTCTTTCT 59.163 52.381 0.00 0.00 0.00 2.52
3595 4767 2.158971 GCCTCACCCAGATCTCTTTCTC 60.159 54.545 0.00 0.00 0.00 2.87
3596 4768 2.433970 CCTCACCCAGATCTCTTTCTCC 59.566 54.545 0.00 0.00 0.00 3.71
3597 4769 3.373830 CTCACCCAGATCTCTTTCTCCT 58.626 50.000 0.00 0.00 0.00 3.69
3598 4770 3.370104 TCACCCAGATCTCTTTCTCCTC 58.630 50.000 0.00 0.00 0.00 3.71
3599 4771 2.433970 CACCCAGATCTCTTTCTCCTCC 59.566 54.545 0.00 0.00 0.00 4.30
3600 4772 2.046292 CCCAGATCTCTTTCTCCTCCC 58.954 57.143 0.00 0.00 0.00 4.30
3601 4773 2.046292 CCAGATCTCTTTCTCCTCCCC 58.954 57.143 0.00 0.00 0.00 4.81
3602 4774 2.628021 CCAGATCTCTTTCTCCTCCCCA 60.628 54.545 0.00 0.00 0.00 4.96
3603 4775 2.433970 CAGATCTCTTTCTCCTCCCCAC 59.566 54.545 0.00 0.00 0.00 4.61
3604 4776 1.765904 GATCTCTTTCTCCTCCCCACC 59.234 57.143 0.00 0.00 0.00 4.61
3605 4777 0.793617 TCTCTTTCTCCTCCCCACCT 59.206 55.000 0.00 0.00 0.00 4.00
3606 4778 1.152271 TCTCTTTCTCCTCCCCACCTT 59.848 52.381 0.00 0.00 0.00 3.50
3607 4779 1.280421 CTCTTTCTCCTCCCCACCTTG 59.720 57.143 0.00 0.00 0.00 3.61
3608 4780 0.322906 CTTTCTCCTCCCCACCTTGC 60.323 60.000 0.00 0.00 0.00 4.01
3609 4781 1.065410 TTTCTCCTCCCCACCTTGCA 61.065 55.000 0.00 0.00 0.00 4.08
3610 4782 1.065410 TTCTCCTCCCCACCTTGCAA 61.065 55.000 0.00 0.00 0.00 4.08
3611 4783 1.001641 CTCCTCCCCACCTTGCAAG 60.002 63.158 19.93 19.93 0.00 4.01
3612 4784 2.677875 CCTCCCCACCTTGCAAGC 60.678 66.667 21.43 0.00 0.00 4.01
3613 4785 2.115910 CTCCCCACCTTGCAAGCA 59.884 61.111 21.43 0.00 0.00 3.91
3614 4786 1.975407 CTCCCCACCTTGCAAGCAG 60.975 63.158 21.43 14.33 0.00 4.24
3615 4787 3.688159 CCCCACCTTGCAAGCAGC 61.688 66.667 21.43 0.00 45.96 5.25
3616 4788 2.599578 CCCACCTTGCAAGCAGCT 60.600 61.111 21.43 0.00 45.94 4.24
3617 4789 2.649034 CCACCTTGCAAGCAGCTG 59.351 61.111 21.43 10.11 45.94 4.24
3618 4790 2.049433 CACCTTGCAAGCAGCTGC 60.049 61.111 31.53 31.53 45.94 5.25
3619 4791 3.300765 ACCTTGCAAGCAGCTGCC 61.301 61.111 34.39 20.05 45.94 4.85
3620 4792 2.989824 CCTTGCAAGCAGCTGCCT 60.990 61.111 34.39 20.85 45.94 4.75
3621 4793 2.567049 CTTGCAAGCAGCTGCCTC 59.433 61.111 34.39 22.80 45.94 4.70
3622 4794 2.987547 TTGCAAGCAGCTGCCTCC 60.988 61.111 34.39 21.92 45.94 4.30
3623 4795 3.502621 TTGCAAGCAGCTGCCTCCT 62.503 57.895 34.39 14.18 45.94 3.69
3624 4796 3.441290 GCAAGCAGCTGCCTCCTG 61.441 66.667 34.39 25.10 43.38 3.86
3629 4801 2.187424 CAGCTGCCTCCTGCTCTC 59.813 66.667 0.00 0.00 43.36 3.20
3630 4802 3.082701 AGCTGCCTCCTGCTCTCC 61.083 66.667 0.00 0.00 41.73 3.71
3631 4803 3.082701 GCTGCCTCCTGCTCTCCT 61.083 66.667 0.00 0.00 42.00 3.69
3632 4804 3.092780 GCTGCCTCCTGCTCTCCTC 62.093 68.421 0.00 0.00 42.00 3.71
3633 4805 2.364842 TGCCTCCTGCTCTCCTCC 60.365 66.667 0.00 0.00 42.00 4.30
3634 4806 3.160748 GCCTCCTGCTCTCCTCCC 61.161 72.222 0.00 0.00 36.87 4.30
3635 4807 2.445654 CCTCCTGCTCTCCTCCCC 60.446 72.222 0.00 0.00 0.00 4.81
3636 4808 2.837291 CTCCTGCTCTCCTCCCCG 60.837 72.222 0.00 0.00 0.00 5.73
3637 4809 3.670629 CTCCTGCTCTCCTCCCCGT 62.671 68.421 0.00 0.00 0.00 5.28
3638 4810 3.151022 CCTGCTCTCCTCCCCGTC 61.151 72.222 0.00 0.00 0.00 4.79
3639 4811 3.522731 CTGCTCTCCTCCCCGTCG 61.523 72.222 0.00 0.00 0.00 5.12
3640 4812 3.997400 CTGCTCTCCTCCCCGTCGA 62.997 68.421 0.00 0.00 0.00 4.20
3641 4813 3.213402 GCTCTCCTCCCCGTCGAG 61.213 72.222 0.00 0.00 0.00 4.04
3642 4814 2.272797 CTCTCCTCCCCGTCGAGT 59.727 66.667 0.00 0.00 0.00 4.18
3643 4815 1.525923 CTCTCCTCCCCGTCGAGTA 59.474 63.158 0.00 0.00 0.00 2.59
3644 4816 0.533308 CTCTCCTCCCCGTCGAGTAG 60.533 65.000 0.00 0.00 0.00 2.57
3645 4817 2.124403 TCCTCCCCGTCGAGTAGC 60.124 66.667 0.00 0.00 0.00 3.58
3646 4818 2.439701 CCTCCCCGTCGAGTAGCA 60.440 66.667 0.00 0.00 0.00 3.49
3647 4819 2.772691 CCTCCCCGTCGAGTAGCAC 61.773 68.421 0.00 0.00 0.00 4.40
3648 4820 3.109612 CTCCCCGTCGAGTAGCACG 62.110 68.421 0.00 0.00 35.72 5.34
3652 4824 4.111016 CGTCGAGTAGCACGGCCA 62.111 66.667 2.24 0.00 32.19 5.36
3653 4825 2.506438 GTCGAGTAGCACGGCCAC 60.506 66.667 2.24 0.00 0.00 5.01
3654 4826 3.755628 TCGAGTAGCACGGCCACC 61.756 66.667 2.24 0.00 0.00 4.61
3655 4827 4.814294 CGAGTAGCACGGCCACCC 62.814 72.222 2.24 0.00 0.00 4.61
3656 4828 4.468689 GAGTAGCACGGCCACCCC 62.469 72.222 2.24 0.00 0.00 4.95
3665 4837 4.115199 GGCCACCCCACCAGCTAG 62.115 72.222 0.00 0.00 0.00 3.42
3666 4838 4.803908 GCCACCCCACCAGCTAGC 62.804 72.222 6.62 6.62 0.00 3.42
3667 4839 3.011517 CCACCCCACCAGCTAGCT 61.012 66.667 12.68 12.68 0.00 3.32
3668 4840 2.270205 CACCCCACCAGCTAGCTG 59.730 66.667 33.58 33.58 43.26 4.24
3669 4841 3.721706 ACCCCACCAGCTAGCTGC 61.722 66.667 34.82 1.10 42.35 5.25
3686 4858 2.668212 CGCCCGTGCTTCTCCAAA 60.668 61.111 0.00 0.00 34.43 3.28
3687 4859 2.954611 GCCCGTGCTTCTCCAAAC 59.045 61.111 0.00 0.00 33.53 2.93
3688 4860 2.626780 GCCCGTGCTTCTCCAAACC 61.627 63.158 0.00 0.00 33.53 3.27
3689 4861 1.228124 CCCGTGCTTCTCCAAACCA 60.228 57.895 0.00 0.00 0.00 3.67
3690 4862 1.515521 CCCGTGCTTCTCCAAACCAC 61.516 60.000 0.00 0.00 0.00 4.16
3691 4863 0.817634 CCGTGCTTCTCCAAACCACA 60.818 55.000 0.00 0.00 0.00 4.17
3692 4864 1.238439 CGTGCTTCTCCAAACCACAT 58.762 50.000 0.00 0.00 0.00 3.21
3693 4865 1.197721 CGTGCTTCTCCAAACCACATC 59.802 52.381 0.00 0.00 0.00 3.06
3694 4866 1.197721 GTGCTTCTCCAAACCACATCG 59.802 52.381 0.00 0.00 0.00 3.84
3695 4867 0.169009 GCTTCTCCAAACCACATCGC 59.831 55.000 0.00 0.00 0.00 4.58
3696 4868 0.804989 CTTCTCCAAACCACATCGCC 59.195 55.000 0.00 0.00 0.00 5.54
3697 4869 0.400213 TTCTCCAAACCACATCGCCT 59.600 50.000 0.00 0.00 0.00 5.52
3698 4870 0.400213 TCTCCAAACCACATCGCCTT 59.600 50.000 0.00 0.00 0.00 4.35
3699 4871 1.626321 TCTCCAAACCACATCGCCTTA 59.374 47.619 0.00 0.00 0.00 2.69
3700 4872 2.009774 CTCCAAACCACATCGCCTTAG 58.990 52.381 0.00 0.00 0.00 2.18
3701 4873 1.094785 CCAAACCACATCGCCTTAGG 58.905 55.000 0.00 0.00 0.00 2.69
3702 4874 0.451783 CAAACCACATCGCCTTAGGC 59.548 55.000 14.22 14.22 46.75 3.93
3714 4886 2.024414 GCCTTAGGCCTTGTACAATGG 58.976 52.381 12.58 13.26 44.06 3.16
3715 4887 2.654863 CCTTAGGCCTTGTACAATGGG 58.345 52.381 12.58 14.91 0.00 4.00
3716 4888 2.241176 CCTTAGGCCTTGTACAATGGGA 59.759 50.000 12.58 0.00 0.00 4.37
3717 4889 3.545703 CTTAGGCCTTGTACAATGGGAG 58.454 50.000 12.58 1.65 0.00 4.30
3718 4890 1.668826 AGGCCTTGTACAATGGGAGA 58.331 50.000 16.08 0.00 0.00 3.71
3719 4891 2.208872 AGGCCTTGTACAATGGGAGAT 58.791 47.619 16.08 0.53 0.00 2.75
3720 4892 2.092212 AGGCCTTGTACAATGGGAGATG 60.092 50.000 16.08 0.00 0.00 2.90
3721 4893 2.357154 GGCCTTGTACAATGGGAGATGT 60.357 50.000 16.08 0.00 0.00 3.06
3722 4894 3.356290 GCCTTGTACAATGGGAGATGTT 58.644 45.455 16.08 0.00 0.00 2.71
3723 4895 3.763897 GCCTTGTACAATGGGAGATGTTT 59.236 43.478 16.08 0.00 0.00 2.83
3724 4896 4.947388 GCCTTGTACAATGGGAGATGTTTA 59.053 41.667 16.08 0.00 0.00 2.01
3725 4897 5.417580 GCCTTGTACAATGGGAGATGTTTAA 59.582 40.000 16.08 0.00 0.00 1.52
3726 4898 6.404734 GCCTTGTACAATGGGAGATGTTTAAG 60.405 42.308 16.08 0.00 0.00 1.85
3727 4899 6.095440 CCTTGTACAATGGGAGATGTTTAAGG 59.905 42.308 9.13 0.00 36.25 2.69
3728 4900 6.381498 TGTACAATGGGAGATGTTTAAGGA 57.619 37.500 0.00 0.00 0.00 3.36
3729 4901 6.414732 TGTACAATGGGAGATGTTTAAGGAG 58.585 40.000 0.00 0.00 0.00 3.69
3730 4902 4.860022 ACAATGGGAGATGTTTAAGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
3731 4903 4.292306 ACAATGGGAGATGTTTAAGGAGGT 59.708 41.667 0.00 0.00 0.00 3.85
3732 4904 4.510167 ATGGGAGATGTTTAAGGAGGTG 57.490 45.455 0.00 0.00 0.00 4.00
3733 4905 2.026262 TGGGAGATGTTTAAGGAGGTGC 60.026 50.000 0.00 0.00 0.00 5.01
3734 4906 2.239907 GGGAGATGTTTAAGGAGGTGCT 59.760 50.000 0.00 0.00 0.00 4.40
3735 4907 3.308473 GGGAGATGTTTAAGGAGGTGCTT 60.308 47.826 0.00 0.00 0.00 3.91
3736 4908 4.080526 GGGAGATGTTTAAGGAGGTGCTTA 60.081 45.833 0.00 0.00 0.00 3.09
3737 4909 5.497474 GGAGATGTTTAAGGAGGTGCTTAA 58.503 41.667 0.00 0.00 0.00 1.85
3738 4910 5.944007 GGAGATGTTTAAGGAGGTGCTTAAA 59.056 40.000 11.19 11.19 34.05 1.52
3739 4911 6.433093 GGAGATGTTTAAGGAGGTGCTTAAAA 59.567 38.462 15.47 8.63 36.96 1.52
3740 4912 7.039993 GGAGATGTTTAAGGAGGTGCTTAAAAA 60.040 37.037 15.47 12.01 36.96 1.94
3763 4935 5.381174 AATAAACCGGGTTTTTCTGTAGC 57.619 39.130 28.50 0.00 37.01 3.58
3764 4936 2.351706 AACCGGGTTTTTCTGTAGCA 57.648 45.000 6.59 0.00 0.00 3.49
3765 4937 1.601166 ACCGGGTTTTTCTGTAGCAC 58.399 50.000 6.32 0.00 0.00 4.40
3766 4938 1.142262 ACCGGGTTTTTCTGTAGCACT 59.858 47.619 6.32 0.00 0.00 4.40
3767 4939 1.535462 CCGGGTTTTTCTGTAGCACTG 59.465 52.381 0.00 0.00 0.00 3.66
3768 4940 1.535462 CGGGTTTTTCTGTAGCACTGG 59.465 52.381 0.00 0.00 0.00 4.00
3769 4941 2.583143 GGGTTTTTCTGTAGCACTGGT 58.417 47.619 0.00 0.00 0.00 4.00
3770 4942 2.293399 GGGTTTTTCTGTAGCACTGGTG 59.707 50.000 0.00 0.00 0.00 4.17
3771 4943 2.949644 GGTTTTTCTGTAGCACTGGTGT 59.050 45.455 2.64 0.00 0.00 4.16
3772 4944 3.003378 GGTTTTTCTGTAGCACTGGTGTC 59.997 47.826 2.64 0.00 0.00 3.67
3773 4945 3.838244 TTTTCTGTAGCACTGGTGTCT 57.162 42.857 2.64 3.40 0.00 3.41
3774 4946 4.948341 TTTTCTGTAGCACTGGTGTCTA 57.052 40.909 2.64 2.55 0.00 2.59
3775 4947 5.483685 TTTTCTGTAGCACTGGTGTCTAT 57.516 39.130 2.64 0.00 0.00 1.98
3776 4948 5.483685 TTTCTGTAGCACTGGTGTCTATT 57.516 39.130 2.64 0.00 0.00 1.73
3777 4949 5.483685 TTCTGTAGCACTGGTGTCTATTT 57.516 39.130 2.64 0.00 0.00 1.40
3778 4950 5.073311 TCTGTAGCACTGGTGTCTATTTC 57.927 43.478 2.64 0.00 0.00 2.17
3779 4951 4.772624 TCTGTAGCACTGGTGTCTATTTCT 59.227 41.667 2.64 0.00 0.00 2.52
3780 4952 5.949952 TCTGTAGCACTGGTGTCTATTTCTA 59.050 40.000 2.64 0.00 0.00 2.10
3781 4953 6.607600 TCTGTAGCACTGGTGTCTATTTCTAT 59.392 38.462 2.64 0.00 0.00 1.98
3782 4954 7.778382 TCTGTAGCACTGGTGTCTATTTCTATA 59.222 37.037 2.64 0.00 0.00 1.31
3783 4955 7.941919 TGTAGCACTGGTGTCTATTTCTATAG 58.058 38.462 2.64 0.00 35.96 1.31
3784 4956 6.412362 AGCACTGGTGTCTATTTCTATAGG 57.588 41.667 0.00 0.00 35.45 2.57
3785 4957 6.136857 AGCACTGGTGTCTATTTCTATAGGA 58.863 40.000 0.00 0.00 35.45 2.94
3786 4958 6.266558 AGCACTGGTGTCTATTTCTATAGGAG 59.733 42.308 0.00 0.00 35.45 3.69
3787 4959 6.265649 GCACTGGTGTCTATTTCTATAGGAGA 59.734 42.308 0.00 0.00 35.45 3.71
3788 4960 7.523052 GCACTGGTGTCTATTTCTATAGGAGAG 60.523 44.444 0.00 0.00 34.93 3.20
3789 4961 7.721842 CACTGGTGTCTATTTCTATAGGAGAGA 59.278 40.741 0.00 0.00 34.93 3.10
3790 4962 8.452868 ACTGGTGTCTATTTCTATAGGAGAGAT 58.547 37.037 0.00 0.00 34.93 2.75
3791 4963 8.642935 TGGTGTCTATTTCTATAGGAGAGATG 57.357 38.462 0.00 0.00 34.93 2.90
3792 4964 7.177568 TGGTGTCTATTTCTATAGGAGAGATGC 59.822 40.741 0.00 0.27 34.93 3.91
3793 4965 7.396055 GGTGTCTATTTCTATAGGAGAGATGCT 59.604 40.741 0.00 0.00 34.93 3.79
3794 4966 8.802267 GTGTCTATTTCTATAGGAGAGATGCTT 58.198 37.037 0.00 0.00 34.93 3.91
3802 4974 8.798402 TTCTATAGGAGAGATGCTTAGTTAAGC 58.202 37.037 15.24 15.24 45.82 3.09
3813 4985 4.715527 CTTAGTTAAGCGTCTACCCTGT 57.284 45.455 0.00 0.00 0.00 4.00
3814 4986 5.824904 CTTAGTTAAGCGTCTACCCTGTA 57.175 43.478 0.00 0.00 0.00 2.74
3815 4987 5.567138 TTAGTTAAGCGTCTACCCTGTAC 57.433 43.478 0.00 0.00 0.00 2.90
3816 4988 3.424703 AGTTAAGCGTCTACCCTGTACA 58.575 45.455 0.00 0.00 0.00 2.90
3817 4989 3.828451 AGTTAAGCGTCTACCCTGTACAA 59.172 43.478 0.00 0.00 0.00 2.41
3818 4990 4.281688 AGTTAAGCGTCTACCCTGTACAAA 59.718 41.667 0.00 0.00 0.00 2.83
3819 4991 3.975168 AAGCGTCTACCCTGTACAAAT 57.025 42.857 0.00 0.00 0.00 2.32
3820 4992 6.153340 AGTTAAGCGTCTACCCTGTACAAATA 59.847 38.462 0.00 0.00 0.00 1.40
3821 4993 5.410355 AAGCGTCTACCCTGTACAAATAA 57.590 39.130 0.00 0.00 0.00 1.40
3822 4994 5.007385 AGCGTCTACCCTGTACAAATAAG 57.993 43.478 0.00 0.00 0.00 1.73
3823 4995 3.554731 GCGTCTACCCTGTACAAATAAGC 59.445 47.826 0.00 0.00 0.00 3.09
3824 4996 4.751060 CGTCTACCCTGTACAAATAAGCA 58.249 43.478 0.00 0.00 0.00 3.91
3825 4997 4.565564 CGTCTACCCTGTACAAATAAGCAC 59.434 45.833 0.00 0.00 0.00 4.40
3826 4998 4.874396 GTCTACCCTGTACAAATAAGCACC 59.126 45.833 0.00 0.00 0.00 5.01
3827 4999 2.706890 ACCCTGTACAAATAAGCACCG 58.293 47.619 0.00 0.00 0.00 4.94
3828 5000 2.014128 CCCTGTACAAATAAGCACCGG 58.986 52.381 0.00 0.00 0.00 5.28
3829 5001 2.617021 CCCTGTACAAATAAGCACCGGT 60.617 50.000 0.00 0.00 0.00 5.28
3830 5002 2.418628 CCTGTACAAATAAGCACCGGTG 59.581 50.000 30.66 30.66 0.00 4.94
3843 5015 3.487563 CACCGGTGCTTAAGAAAATCC 57.512 47.619 24.02 0.00 0.00 3.01
3844 5016 3.081804 CACCGGTGCTTAAGAAAATCCT 58.918 45.455 24.02 0.00 0.00 3.24
3845 5017 3.081804 ACCGGTGCTTAAGAAAATCCTG 58.918 45.455 6.12 0.00 0.00 3.86
3846 5018 3.244770 ACCGGTGCTTAAGAAAATCCTGA 60.245 43.478 6.12 0.00 0.00 3.86
3847 5019 3.947834 CCGGTGCTTAAGAAAATCCTGAT 59.052 43.478 6.67 0.00 0.00 2.90
3848 5020 4.399303 CCGGTGCTTAAGAAAATCCTGATT 59.601 41.667 6.67 0.00 0.00 2.57
3849 5021 5.105756 CCGGTGCTTAAGAAAATCCTGATTT 60.106 40.000 6.67 0.00 42.35 2.17
3850 5022 6.094881 CCGGTGCTTAAGAAAATCCTGATTTA 59.905 38.462 6.67 0.00 39.88 1.40
3851 5023 7.201821 CCGGTGCTTAAGAAAATCCTGATTTAT 60.202 37.037 6.67 0.00 39.88 1.40
3852 5024 8.190784 CGGTGCTTAAGAAAATCCTGATTTATT 58.809 33.333 6.67 6.82 39.88 1.40
3853 5025 9.875691 GGTGCTTAAGAAAATCCTGATTTATTT 57.124 29.630 6.67 6.26 39.88 1.40
3864 5036 9.875691 AAATCCTGATTTATTTTTCTAAGCACC 57.124 29.630 3.35 0.00 39.08 5.01
3865 5037 8.829373 ATCCTGATTTATTTTTCTAAGCACCT 57.171 30.769 0.00 0.00 0.00 4.00
3866 5038 8.281212 TCCTGATTTATTTTTCTAAGCACCTC 57.719 34.615 0.00 0.00 0.00 3.85
3867 5039 8.109634 TCCTGATTTATTTTTCTAAGCACCTCT 58.890 33.333 0.00 0.00 0.00 3.69
3868 5040 8.401709 CCTGATTTATTTTTCTAAGCACCTCTC 58.598 37.037 0.00 0.00 0.00 3.20
3869 5041 8.281212 TGATTTATTTTTCTAAGCACCTCTCC 57.719 34.615 0.00 0.00 0.00 3.71
3870 5042 8.109634 TGATTTATTTTTCTAAGCACCTCTCCT 58.890 33.333 0.00 0.00 0.00 3.69
3871 5043 9.614792 GATTTATTTTTCTAAGCACCTCTCCTA 57.385 33.333 0.00 0.00 0.00 2.94
3872 5044 9.975218 ATTTATTTTTCTAAGCACCTCTCCTAA 57.025 29.630 0.00 0.00 0.00 2.69
3873 5045 9.449719 TTTATTTTTCTAAGCACCTCTCCTAAG 57.550 33.333 0.00 0.00 0.00 2.18
3874 5046 4.473477 TTTCTAAGCACCTCTCCTAAGC 57.527 45.455 0.00 0.00 0.00 3.09
3875 5047 3.101643 TCTAAGCACCTCTCCTAAGCA 57.898 47.619 0.00 0.00 0.00 3.91
3876 5048 3.647636 TCTAAGCACCTCTCCTAAGCAT 58.352 45.455 0.00 0.00 0.00 3.79
3877 5049 2.998316 AAGCACCTCTCCTAAGCATC 57.002 50.000 0.00 0.00 0.00 3.91
3878 5050 2.173126 AGCACCTCTCCTAAGCATCT 57.827 50.000 0.00 0.00 0.00 2.90
3879 5051 2.038659 AGCACCTCTCCTAAGCATCTC 58.961 52.381 0.00 0.00 0.00 2.75
3880 5052 1.069978 GCACCTCTCCTAAGCATCTCC 59.930 57.143 0.00 0.00 0.00 3.71
3881 5053 1.691434 CACCTCTCCTAAGCATCTCCC 59.309 57.143 0.00 0.00 0.00 4.30
3882 5054 1.292242 ACCTCTCCTAAGCATCTCCCA 59.708 52.381 0.00 0.00 0.00 4.37
3883 5055 2.090267 ACCTCTCCTAAGCATCTCCCAT 60.090 50.000 0.00 0.00 0.00 4.00
3884 5056 2.978278 CCTCTCCTAAGCATCTCCCATT 59.022 50.000 0.00 0.00 0.00 3.16
3885 5057 3.244491 CCTCTCCTAAGCATCTCCCATTG 60.244 52.174 0.00 0.00 0.00 2.82
3886 5058 3.387962 TCTCCTAAGCATCTCCCATTGT 58.612 45.455 0.00 0.00 0.00 2.71
3887 5059 4.556697 TCTCCTAAGCATCTCCCATTGTA 58.443 43.478 0.00 0.00 0.00 2.41
3888 5060 4.345257 TCTCCTAAGCATCTCCCATTGTAC 59.655 45.833 0.00 0.00 0.00 2.90
3889 5061 4.037222 TCCTAAGCATCTCCCATTGTACA 58.963 43.478 0.00 0.00 0.00 2.90
3890 5062 4.473196 TCCTAAGCATCTCCCATTGTACAA 59.527 41.667 11.41 11.41 0.00 2.41
3891 5063 4.818546 CCTAAGCATCTCCCATTGTACAAG 59.181 45.833 14.65 6.30 0.00 3.16
3892 5064 3.287867 AGCATCTCCCATTGTACAAGG 57.712 47.619 14.65 13.92 0.00 3.61
3893 5065 2.578021 AGCATCTCCCATTGTACAAGGT 59.422 45.455 18.13 3.14 0.00 3.50
3894 5066 3.010584 AGCATCTCCCATTGTACAAGGTT 59.989 43.478 18.13 0.00 0.00 3.50
3895 5067 3.763897 GCATCTCCCATTGTACAAGGTTT 59.236 43.478 18.13 0.00 0.00 3.27
3896 5068 4.947388 GCATCTCCCATTGTACAAGGTTTA 59.053 41.667 18.13 3.39 0.00 2.01
3897 5069 5.594317 GCATCTCCCATTGTACAAGGTTTAT 59.406 40.000 18.13 4.57 0.00 1.40
3898 5070 6.238759 GCATCTCCCATTGTACAAGGTTTATC 60.239 42.308 18.13 2.30 0.00 1.75
3899 5071 5.751586 TCTCCCATTGTACAAGGTTTATCC 58.248 41.667 18.13 0.00 0.00 2.59
3900 5072 5.251932 TCTCCCATTGTACAAGGTTTATCCA 59.748 40.000 18.13 0.00 39.02 3.41
3901 5073 5.258051 TCCCATTGTACAAGGTTTATCCAC 58.742 41.667 18.13 0.00 39.02 4.02
3902 5074 5.014755 TCCCATTGTACAAGGTTTATCCACT 59.985 40.000 18.13 0.00 39.02 4.00
3903 5075 5.125417 CCCATTGTACAAGGTTTATCCACTG 59.875 44.000 18.13 5.18 39.02 3.66
3904 5076 5.943416 CCATTGTACAAGGTTTATCCACTGA 59.057 40.000 18.13 0.00 39.02 3.41
3905 5077 6.603201 CCATTGTACAAGGTTTATCCACTGAT 59.397 38.462 18.13 0.00 39.02 2.90
3906 5078 7.415541 CCATTGTACAAGGTTTATCCACTGATG 60.416 40.741 18.13 4.01 39.02 3.07
3907 5079 4.941263 TGTACAAGGTTTATCCACTGATGC 59.059 41.667 0.00 0.00 39.02 3.91
3908 5080 4.032960 ACAAGGTTTATCCACTGATGCA 57.967 40.909 0.00 0.00 39.02 3.96
3909 5081 4.406456 ACAAGGTTTATCCACTGATGCAA 58.594 39.130 0.00 0.00 39.02 4.08
3910 5082 4.218417 ACAAGGTTTATCCACTGATGCAAC 59.782 41.667 0.00 0.00 39.02 4.17
3911 5083 3.356290 AGGTTTATCCACTGATGCAACC 58.644 45.455 0.00 9.06 41.57 3.77
3912 5084 2.427095 GGTTTATCCACTGATGCAACCC 59.573 50.000 0.00 0.00 38.51 4.11
3913 5085 2.427095 GTTTATCCACTGATGCAACCCC 59.573 50.000 0.00 0.00 32.18 4.95
3914 5086 0.550914 TATCCACTGATGCAACCCCC 59.449 55.000 0.00 0.00 32.18 5.40
3931 5103 4.619227 CCGGGCGACAACACTGGT 62.619 66.667 0.00 0.00 0.00 4.00
3932 5104 3.345808 CGGGCGACAACACTGGTG 61.346 66.667 0.00 0.00 0.00 4.17
3933 5105 3.660111 GGGCGACAACACTGGTGC 61.660 66.667 0.00 0.00 0.00 5.01
3934 5106 4.012895 GGCGACAACACTGGTGCG 62.013 66.667 0.00 0.40 0.00 5.34
3935 5107 4.666532 GCGACAACACTGGTGCGC 62.667 66.667 16.40 16.40 36.33 6.09
3936 5108 4.012895 CGACAACACTGGTGCGCC 62.013 66.667 10.11 10.11 0.00 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.917072 GGACTTCCGCTCACTTCTT 57.083 52.632 0.00 0.00 0.00 2.52
22 23 2.045926 GCCTTGTCGAGGGTGCAT 60.046 61.111 8.30 0.00 46.40 3.96
23 24 4.329545 GGCCTTGTCGAGGGTGCA 62.330 66.667 8.30 0.00 46.40 4.57
116 122 2.281276 GTCGGCGTGTTTCCCCTT 60.281 61.111 6.85 0.00 0.00 3.95
117 123 4.675029 CGTCGGCGTGTTTCCCCT 62.675 66.667 6.85 0.00 0.00 4.79
352 358 2.664851 CACGCCTTGAACGCCTCA 60.665 61.111 0.00 0.00 0.00 3.86
787 809 2.950172 GCGTCGAAAAAGAGCGGCA 61.950 57.895 1.45 0.00 31.48 5.69
802 829 2.852075 TTCAACCTCCCAGGGCGT 60.852 61.111 0.00 0.00 40.58 5.68
815 842 0.391661 GAGCATCTCCAGCCGTTCAA 60.392 55.000 0.00 0.00 0.00 2.69
836 863 2.263077 CGTTATGGAGTGCTCTGTGTC 58.737 52.381 0.00 0.00 0.00 3.67
855 882 2.358957 TCCTGATGCTTGATTTGTCCG 58.641 47.619 0.00 0.00 0.00 4.79
873 900 3.006217 GCAGGATCCAATTTAGCCATTCC 59.994 47.826 15.82 0.00 0.00 3.01
912 945 3.565902 GCCCATCTTATAAGCCTTGTGAC 59.434 47.826 7.67 0.00 0.00 3.67
962 997 7.826690 TGGAATTACTTATTTCACAAAGCTCC 58.173 34.615 0.00 0.00 26.18 4.70
1038 1076 3.511934 ACAAAAGGATCGCTAGTGAGACT 59.488 43.478 12.29 9.16 0.00 3.24
1315 1377 0.824109 TTCCCGTACAGGCAGATCTG 59.176 55.000 18.84 18.84 39.21 2.90
1413 1475 1.598130 GAACTGCCTGACCTTGCGT 60.598 57.895 0.00 0.00 0.00 5.24
1542 1613 2.345991 GCCACCTTAGCCGTGACA 59.654 61.111 0.00 0.00 32.77 3.58
1551 1622 3.636313 CTCGCCGAACGCCACCTTA 62.636 63.158 0.00 0.00 43.23 2.69
1772 1843 2.307980 TCTCCGGTCTTGTTCTCCTCTA 59.692 50.000 0.00 0.00 0.00 2.43
1895 1997 4.402056 GCAGTTAGCTATTACCACTCCA 57.598 45.455 0.00 0.00 41.15 3.86
1908 2010 2.746362 AGCACATCTGAAAGCAGTTAGC 59.254 45.455 0.00 0.00 42.84 3.09
1918 2020 9.626045 CGTTTCATATATACTAGCACATCTGAA 57.374 33.333 0.00 0.00 0.00 3.02
1922 2024 7.544622 TCCCGTTTCATATATACTAGCACATC 58.455 38.462 0.00 0.00 0.00 3.06
1926 2028 9.431887 GAAAATCCCGTTTCATATATACTAGCA 57.568 33.333 0.00 0.00 37.44 3.49
1927 2029 9.431887 TGAAAATCCCGTTTCATATATACTAGC 57.568 33.333 0.00 0.00 41.45 3.42
1973 2079 2.955660 TGGAAGTGAAAACCATGTCACC 59.044 45.455 9.81 0.00 44.30 4.02
2028 2139 9.635520 CTTGCTGAAATATTTCTGAAAAGTGAT 57.364 29.630 29.05 0.00 38.07 3.06
2059 2170 9.125026 AGTCACTGGTATTGATTGGATTTATTC 57.875 33.333 0.00 0.00 0.00 1.75
2067 2184 6.764308 AATTGAGTCACTGGTATTGATTGG 57.236 37.500 0.00 0.00 0.00 3.16
2087 2204 3.414269 CCCTTTGGCTGAAATGCAAATT 58.586 40.909 0.00 0.00 34.04 1.82
2167 2308 3.392769 TTCGGTCAAAATAATTCGGCG 57.607 42.857 0.00 0.00 0.00 6.46
2205 2346 8.830201 TGATTGAAGTTCCATAATTTTGTTGG 57.170 30.769 0.00 0.00 0.00 3.77
2275 2417 5.527214 CCAGCGAACATATCCTAATTTGTCA 59.473 40.000 0.00 0.00 0.00 3.58
2606 2749 0.681564 CTGCGTCCTCCCAGTACTCT 60.682 60.000 0.00 0.00 0.00 3.24
2616 2759 0.172352 CTGAACTCCTCTGCGTCCTC 59.828 60.000 0.00 0.00 0.00 3.71
2901 3044 4.754114 GCAGTCATCAATCTCCTTATGGAC 59.246 45.833 0.00 0.00 37.46 4.02
3007 3155 8.502105 AAACGGAGGGAATAGTAACTAAAATG 57.498 34.615 0.00 0.00 0.00 2.32
3022 3170 5.482878 AGACTTACATTTAGAAACGGAGGGA 59.517 40.000 0.00 0.00 0.00 4.20
3023 3171 5.731591 AGACTTACATTTAGAAACGGAGGG 58.268 41.667 0.00 0.00 0.00 4.30
3024 3172 7.603024 AGAAAGACTTACATTTAGAAACGGAGG 59.397 37.037 0.00 0.00 0.00 4.30
3025 3173 8.535690 AGAAAGACTTACATTTAGAAACGGAG 57.464 34.615 0.00 0.00 0.00 4.63
3026 3174 9.985730 TTAGAAAGACTTACATTTAGAAACGGA 57.014 29.630 0.00 0.00 0.00 4.69
3051 3199 9.458374 CCGTTTGTAGTTTGTATTGAAATCTTT 57.542 29.630 0.00 0.00 0.00 2.52
3052 3200 8.842280 TCCGTTTGTAGTTTGTATTGAAATCTT 58.158 29.630 0.00 0.00 0.00 2.40
3053 3201 8.385898 TCCGTTTGTAGTTTGTATTGAAATCT 57.614 30.769 0.00 0.00 0.00 2.40
3054 3202 9.061610 CATCCGTTTGTAGTTTGTATTGAAATC 57.938 33.333 0.00 0.00 0.00 2.17
3055 3203 8.573035 ACATCCGTTTGTAGTTTGTATTGAAAT 58.427 29.630 0.00 0.00 0.00 2.17
3056 3204 7.932335 ACATCCGTTTGTAGTTTGTATTGAAA 58.068 30.769 0.00 0.00 0.00 2.69
3057 3205 7.499321 ACATCCGTTTGTAGTTTGTATTGAA 57.501 32.000 0.00 0.00 0.00 2.69
3058 3206 8.661257 CATACATCCGTTTGTAGTTTGTATTGA 58.339 33.333 0.00 0.00 35.65 2.57
3059 3207 8.447833 ACATACATCCGTTTGTAGTTTGTATTG 58.552 33.333 0.00 0.00 35.80 1.90
3060 3208 8.556213 ACATACATCCGTTTGTAGTTTGTATT 57.444 30.769 0.00 0.00 35.80 1.89
3061 3209 9.309516 CTACATACATCCGTTTGTAGTTTGTAT 57.690 33.333 12.33 0.00 45.32 2.29
3062 3210 8.692110 CTACATACATCCGTTTGTAGTTTGTA 57.308 34.615 12.33 0.00 45.32 2.41
3063 3211 7.591006 CTACATACATCCGTTTGTAGTTTGT 57.409 36.000 12.33 0.00 45.32 2.83
3070 3218 8.958119 AATTATGTCTACATACATCCGTTTGT 57.042 30.769 2.30 0.00 40.52 2.83
3100 3248 5.292101 CGGAGGAAAATGAGTGAATCTACAC 59.708 44.000 0.00 0.00 40.60 2.90
3101 3249 5.046591 ACGGAGGAAAATGAGTGAATCTACA 60.047 40.000 0.00 0.00 0.00 2.74
3102 3250 5.420409 ACGGAGGAAAATGAGTGAATCTAC 58.580 41.667 0.00 0.00 0.00 2.59
3103 3251 5.677319 ACGGAGGAAAATGAGTGAATCTA 57.323 39.130 0.00 0.00 0.00 1.98
3104 3252 4.559862 ACGGAGGAAAATGAGTGAATCT 57.440 40.909 0.00 0.00 0.00 2.40
3105 3253 5.817816 ACATACGGAGGAAAATGAGTGAATC 59.182 40.000 0.00 0.00 0.00 2.52
3106 3254 5.745227 ACATACGGAGGAAAATGAGTGAAT 58.255 37.500 0.00 0.00 0.00 2.57
3107 3255 5.160607 ACATACGGAGGAAAATGAGTGAA 57.839 39.130 0.00 0.00 0.00 3.18
3108 3256 4.819105 ACATACGGAGGAAAATGAGTGA 57.181 40.909 0.00 0.00 0.00 3.41
3109 3257 5.661458 ACTACATACGGAGGAAAATGAGTG 58.339 41.667 0.00 0.00 0.00 3.51
3110 3258 5.934402 ACTACATACGGAGGAAAATGAGT 57.066 39.130 0.00 0.00 0.00 3.41
3111 3259 8.888579 AATAACTACATACGGAGGAAAATGAG 57.111 34.615 0.00 0.00 0.00 2.90
3150 3298 9.198475 TCTCCGTTCCTAAATATAAGTCTTTCT 57.802 33.333 0.00 0.00 0.00 2.52
3151 3299 9.813446 TTCTCCGTTCCTAAATATAAGTCTTTC 57.187 33.333 0.00 0.00 0.00 2.62
3153 3301 9.819267 CTTTCTCCGTTCCTAAATATAAGTCTT 57.181 33.333 0.00 0.00 0.00 3.01
3154 3302 8.979534 ACTTTCTCCGTTCCTAAATATAAGTCT 58.020 33.333 0.00 0.00 0.00 3.24
3160 3308 9.930693 GATGATACTTTCTCCGTTCCTAAATAT 57.069 33.333 0.00 0.00 0.00 1.28
3161 3309 8.365647 GGATGATACTTTCTCCGTTCCTAAATA 58.634 37.037 0.00 0.00 0.00 1.40
3162 3310 7.217906 GGATGATACTTTCTCCGTTCCTAAAT 58.782 38.462 0.00 0.00 0.00 1.40
3163 3311 6.407752 GGGATGATACTTTCTCCGTTCCTAAA 60.408 42.308 0.00 0.00 0.00 1.85
3164 3312 5.070047 GGGATGATACTTTCTCCGTTCCTAA 59.930 44.000 0.00 0.00 0.00 2.69
3165 3313 4.587684 GGGATGATACTTTCTCCGTTCCTA 59.412 45.833 0.00 0.00 0.00 2.94
3166 3314 3.388350 GGGATGATACTTTCTCCGTTCCT 59.612 47.826 0.00 0.00 0.00 3.36
3167 3315 3.729966 GGGATGATACTTTCTCCGTTCC 58.270 50.000 0.00 0.00 0.00 3.62
3168 3316 3.181478 ACGGGATGATACTTTCTCCGTTC 60.181 47.826 0.00 0.00 40.58 3.95
3169 3317 2.764572 ACGGGATGATACTTTCTCCGTT 59.235 45.455 0.00 0.00 40.58 4.44
3170 3318 2.385803 ACGGGATGATACTTTCTCCGT 58.614 47.619 0.00 0.00 39.56 4.69
3171 3319 3.123804 CAACGGGATGATACTTTCTCCG 58.876 50.000 0.00 0.00 38.30 4.63
3172 3320 4.138487 ACAACGGGATGATACTTTCTCC 57.862 45.455 0.00 0.00 0.00 3.71
3173 3321 7.595502 CACTATACAACGGGATGATACTTTCTC 59.404 40.741 0.00 0.00 0.00 2.87
3174 3322 7.069578 ACACTATACAACGGGATGATACTTTCT 59.930 37.037 0.00 0.00 0.00 2.52
3175 3323 7.208080 ACACTATACAACGGGATGATACTTTC 58.792 38.462 0.00 0.00 0.00 2.62
3176 3324 7.120923 ACACTATACAACGGGATGATACTTT 57.879 36.000 0.00 0.00 0.00 2.66
3177 3325 6.726490 ACACTATACAACGGGATGATACTT 57.274 37.500 0.00 0.00 0.00 2.24
3178 3326 9.696572 ATATACACTATACAACGGGATGATACT 57.303 33.333 0.00 0.00 0.00 2.12
3179 3327 9.947669 GATATACACTATACAACGGGATGATAC 57.052 37.037 0.00 0.00 0.00 2.24
3180 3328 9.689501 TGATATACACTATACAACGGGATGATA 57.310 33.333 0.00 0.00 0.00 2.15
3181 3329 8.589701 TGATATACACTATACAACGGGATGAT 57.410 34.615 0.00 0.00 0.00 2.45
3182 3330 8.589701 ATGATATACACTATACAACGGGATGA 57.410 34.615 0.00 0.00 0.00 2.92
3364 4536 6.817765 TGCAAATAAGAAGTGTTTCCCTAG 57.182 37.500 0.00 0.00 33.64 3.02
3383 4555 0.871722 CCGTCGGATTTCAGTTGCAA 59.128 50.000 4.91 0.00 0.00 4.08
3386 4558 1.659098 GTAGCCGTCGGATTTCAGTTG 59.341 52.381 17.49 0.00 0.00 3.16
3387 4559 1.405121 GGTAGCCGTCGGATTTCAGTT 60.405 52.381 17.49 0.00 0.00 3.16
3388 4560 0.175073 GGTAGCCGTCGGATTTCAGT 59.825 55.000 17.49 0.00 0.00 3.41
3389 4561 0.174845 TGGTAGCCGTCGGATTTCAG 59.825 55.000 17.49 0.00 0.00 3.02
3390 4562 0.609151 TTGGTAGCCGTCGGATTTCA 59.391 50.000 17.49 7.95 0.00 2.69
3391 4563 1.729284 TTTGGTAGCCGTCGGATTTC 58.271 50.000 17.49 5.64 0.00 2.17
3392 4564 2.413310 ATTTGGTAGCCGTCGGATTT 57.587 45.000 17.49 1.73 0.00 2.17
3393 4565 2.014128 CAATTTGGTAGCCGTCGGATT 58.986 47.619 17.49 4.56 0.00 3.01
3394 4566 1.065709 ACAATTTGGTAGCCGTCGGAT 60.066 47.619 17.49 12.48 0.00 4.18
3395 4567 0.322322 ACAATTTGGTAGCCGTCGGA 59.678 50.000 17.49 0.00 0.00 4.55
3396 4568 0.446222 CACAATTTGGTAGCCGTCGG 59.554 55.000 6.99 6.99 0.00 4.79
3397 4569 0.179200 GCACAATTTGGTAGCCGTCG 60.179 55.000 0.78 0.00 0.00 5.12
3398 4570 1.165270 AGCACAATTTGGTAGCCGTC 58.835 50.000 0.78 0.00 32.76 4.79
3399 4571 1.539827 GAAGCACAATTTGGTAGCCGT 59.460 47.619 0.78 0.00 33.68 5.68
3400 4572 1.812571 AGAAGCACAATTTGGTAGCCG 59.187 47.619 0.78 0.00 33.68 5.52
3401 4573 3.942130 AAGAAGCACAATTTGGTAGCC 57.058 42.857 0.78 0.00 33.68 3.93
3402 4574 7.930217 TCATATAAGAAGCACAATTTGGTAGC 58.070 34.615 0.78 2.36 33.68 3.58
3405 4577 9.995003 TTTTTCATATAAGAAGCACAATTTGGT 57.005 25.926 0.78 0.00 37.63 3.67
3430 4602 3.254903 GTGATTACTTCCCTGCCGTTTTT 59.745 43.478 0.00 0.00 0.00 1.94
3431 4603 2.817844 GTGATTACTTCCCTGCCGTTTT 59.182 45.455 0.00 0.00 0.00 2.43
3432 4604 2.433436 GTGATTACTTCCCTGCCGTTT 58.567 47.619 0.00 0.00 0.00 3.60
3433 4605 1.339727 GGTGATTACTTCCCTGCCGTT 60.340 52.381 0.00 0.00 0.00 4.44
3434 4606 0.252197 GGTGATTACTTCCCTGCCGT 59.748 55.000 0.00 0.00 0.00 5.68
3435 4607 0.463833 GGGTGATTACTTCCCTGCCG 60.464 60.000 0.00 0.00 38.29 5.69
3436 4608 0.463833 CGGGTGATTACTTCCCTGCC 60.464 60.000 0.00 0.00 39.10 4.85
3437 4609 1.095807 GCGGGTGATTACTTCCCTGC 61.096 60.000 0.00 0.00 38.83 4.85
3438 4610 0.251916 TGCGGGTGATTACTTCCCTG 59.748 55.000 0.00 0.00 39.10 4.45
3439 4611 0.541863 CTGCGGGTGATTACTTCCCT 59.458 55.000 0.00 0.00 39.10 4.20
3440 4612 1.095807 GCTGCGGGTGATTACTTCCC 61.096 60.000 0.00 0.00 37.98 3.97
3441 4613 1.095807 GGCTGCGGGTGATTACTTCC 61.096 60.000 0.00 0.00 0.00 3.46
3442 4614 1.095807 GGGCTGCGGGTGATTACTTC 61.096 60.000 0.00 0.00 0.00 3.01
3443 4615 1.077716 GGGCTGCGGGTGATTACTT 60.078 57.895 0.00 0.00 0.00 2.24
3444 4616 2.590092 GGGCTGCGGGTGATTACT 59.410 61.111 0.00 0.00 0.00 2.24
3445 4617 2.895372 CGGGCTGCGGGTGATTAC 60.895 66.667 0.00 0.00 0.00 1.89
3446 4618 3.395702 ACGGGCTGCGGGTGATTA 61.396 61.111 0.00 0.00 0.00 1.75
3452 4624 4.690719 TTACACACGGGCTGCGGG 62.691 66.667 0.00 0.00 0.00 6.13
3453 4625 3.419759 GTTACACACGGGCTGCGG 61.420 66.667 0.00 0.00 0.00 5.69
3454 4626 2.663520 TGTTACACACGGGCTGCG 60.664 61.111 0.00 0.00 0.00 5.18
3455 4627 2.943653 GTGTTACACACGGGCTGC 59.056 61.111 10.96 0.00 39.53 5.25
3463 4635 6.441222 AGAGATATTAGGGGAGTGTTACACA 58.559 40.000 18.19 0.00 36.74 3.72
3464 4636 6.778559 AGAGAGATATTAGGGGAGTGTTACAC 59.221 42.308 7.50 7.50 34.10 2.90
3465 4637 6.923670 AGAGAGATATTAGGGGAGTGTTACA 58.076 40.000 0.00 0.00 0.00 2.41
3466 4638 8.937207 TTAGAGAGATATTAGGGGAGTGTTAC 57.063 38.462 0.00 0.00 0.00 2.50
3467 4639 9.947189 TTTTAGAGAGATATTAGGGGAGTGTTA 57.053 33.333 0.00 0.00 0.00 2.41
3468 4640 8.855804 TTTTAGAGAGATATTAGGGGAGTGTT 57.144 34.615 0.00 0.00 0.00 3.32
3469 4641 8.855804 TTTTTAGAGAGATATTAGGGGAGTGT 57.144 34.615 0.00 0.00 0.00 3.55
3492 4664 9.825109 GCAATTAGGAGAGATTAGTAGAGTTTT 57.175 33.333 0.00 0.00 0.00 2.43
3493 4665 8.982723 TGCAATTAGGAGAGATTAGTAGAGTTT 58.017 33.333 0.00 0.00 0.00 2.66
3494 4666 8.540507 TGCAATTAGGAGAGATTAGTAGAGTT 57.459 34.615 0.00 0.00 0.00 3.01
3495 4667 8.540507 TTGCAATTAGGAGAGATTAGTAGAGT 57.459 34.615 0.00 0.00 0.00 3.24
3496 4668 9.255304 GTTTGCAATTAGGAGAGATTAGTAGAG 57.745 37.037 0.00 0.00 0.00 2.43
3497 4669 7.921214 CGTTTGCAATTAGGAGAGATTAGTAGA 59.079 37.037 0.00 0.00 0.00 2.59
3498 4670 7.306866 GCGTTTGCAATTAGGAGAGATTAGTAG 60.307 40.741 0.00 0.00 42.15 2.57
3499 4671 6.479001 GCGTTTGCAATTAGGAGAGATTAGTA 59.521 38.462 0.00 0.00 42.15 1.82
3500 4672 5.294552 GCGTTTGCAATTAGGAGAGATTAGT 59.705 40.000 0.00 0.00 42.15 2.24
3501 4673 5.742446 GCGTTTGCAATTAGGAGAGATTAG 58.258 41.667 0.00 0.00 42.15 1.73
3502 4674 5.734855 GCGTTTGCAATTAGGAGAGATTA 57.265 39.130 0.00 0.00 42.15 1.75
3503 4675 4.622701 GCGTTTGCAATTAGGAGAGATT 57.377 40.909 0.00 0.00 42.15 2.40
3530 4702 4.154347 GAGGAGCTCAGGCCGGTG 62.154 72.222 17.19 0.89 39.73 4.94
3533 4705 3.847602 CTGGAGGAGCTCAGGCCG 61.848 72.222 17.19 6.20 39.73 6.13
3534 4706 4.173924 GCTGGAGGAGCTCAGGCC 62.174 72.222 17.19 13.44 45.21 5.19
3570 4742 4.554036 GATCTGGGTGAGGCGGGC 62.554 72.222 0.00 0.00 0.00 6.13
3571 4743 2.765807 AGATCTGGGTGAGGCGGG 60.766 66.667 0.00 0.00 0.00 6.13
3572 4744 1.333636 AAGAGATCTGGGTGAGGCGG 61.334 60.000 0.00 0.00 0.00 6.13
3573 4745 0.539051 AAAGAGATCTGGGTGAGGCG 59.461 55.000 0.00 0.00 0.00 5.52
3574 4746 1.836802 AGAAAGAGATCTGGGTGAGGC 59.163 52.381 0.00 0.00 0.00 4.70
3575 4747 2.433970 GGAGAAAGAGATCTGGGTGAGG 59.566 54.545 0.00 0.00 0.00 3.86
3576 4748 3.373830 AGGAGAAAGAGATCTGGGTGAG 58.626 50.000 0.00 0.00 0.00 3.51
3577 4749 3.370104 GAGGAGAAAGAGATCTGGGTGA 58.630 50.000 0.00 0.00 0.00 4.02
3578 4750 2.433970 GGAGGAGAAAGAGATCTGGGTG 59.566 54.545 0.00 0.00 0.00 4.61
3579 4751 2.628290 GGGAGGAGAAAGAGATCTGGGT 60.628 54.545 0.00 0.00 0.00 4.51
3580 4752 2.046292 GGGAGGAGAAAGAGATCTGGG 58.954 57.143 0.00 0.00 0.00 4.45
3581 4753 2.046292 GGGGAGGAGAAAGAGATCTGG 58.954 57.143 0.00 0.00 0.00 3.86
3582 4754 2.433970 GTGGGGAGGAGAAAGAGATCTG 59.566 54.545 0.00 0.00 0.00 2.90
3583 4755 2.628290 GGTGGGGAGGAGAAAGAGATCT 60.628 54.545 0.00 0.00 0.00 2.75
3584 4756 1.765904 GGTGGGGAGGAGAAAGAGATC 59.234 57.143 0.00 0.00 0.00 2.75
3585 4757 1.367848 AGGTGGGGAGGAGAAAGAGAT 59.632 52.381 0.00 0.00 0.00 2.75
3586 4758 0.793617 AGGTGGGGAGGAGAAAGAGA 59.206 55.000 0.00 0.00 0.00 3.10
3587 4759 1.280421 CAAGGTGGGGAGGAGAAAGAG 59.720 57.143 0.00 0.00 0.00 2.85
3588 4760 1.362224 CAAGGTGGGGAGGAGAAAGA 58.638 55.000 0.00 0.00 0.00 2.52
3589 4761 0.322906 GCAAGGTGGGGAGGAGAAAG 60.323 60.000 0.00 0.00 0.00 2.62
3590 4762 1.065410 TGCAAGGTGGGGAGGAGAAA 61.065 55.000 0.00 0.00 0.00 2.52
3591 4763 1.065410 TTGCAAGGTGGGGAGGAGAA 61.065 55.000 0.00 0.00 0.00 2.87
3592 4764 1.463214 TTGCAAGGTGGGGAGGAGA 60.463 57.895 0.00 0.00 0.00 3.71
3593 4765 1.001641 CTTGCAAGGTGGGGAGGAG 60.002 63.158 19.14 0.00 0.00 3.69
3594 4766 3.170362 CTTGCAAGGTGGGGAGGA 58.830 61.111 19.14 0.00 0.00 3.71
3595 4767 2.677875 GCTTGCAAGGTGGGGAGG 60.678 66.667 27.10 0.14 0.00 4.30
3596 4768 1.975407 CTGCTTGCAAGGTGGGGAG 60.975 63.158 27.10 9.08 0.00 4.30
3597 4769 2.115910 CTGCTTGCAAGGTGGGGA 59.884 61.111 27.10 2.51 0.00 4.81
3598 4770 3.688159 GCTGCTTGCAAGGTGGGG 61.688 66.667 27.10 2.48 42.31 4.96
3599 4771 2.599578 AGCTGCTTGCAAGGTGGG 60.600 61.111 27.10 3.27 45.94 4.61
3600 4772 2.649034 CAGCTGCTTGCAAGGTGG 59.351 61.111 27.10 3.67 45.94 4.61
3601 4773 2.049433 GCAGCTGCTTGCAAGGTG 60.049 61.111 31.33 18.66 45.94 4.00
3602 4774 3.300765 GGCAGCTGCTTGCAAGGT 61.301 61.111 35.82 5.61 45.86 3.50
3603 4775 2.989824 AGGCAGCTGCTTGCAAGG 60.990 61.111 35.82 13.03 45.86 3.61
3604 4776 2.567049 GAGGCAGCTGCTTGCAAG 59.433 61.111 35.82 22.44 45.86 4.01
3605 4777 2.987547 GGAGGCAGCTGCTTGCAA 60.988 61.111 35.82 0.00 45.86 4.08
3606 4778 3.962694 AGGAGGCAGCTGCTTGCA 61.963 61.111 36.75 0.00 45.86 4.08
3607 4779 3.441290 CAGGAGGCAGCTGCTTGC 61.441 66.667 35.82 33.31 43.34 4.01
3608 4780 3.441290 GCAGGAGGCAGCTGCTTG 61.441 66.667 35.82 26.93 43.97 4.01
3617 4789 3.160748 GGGAGGAGAGCAGGAGGC 61.161 72.222 0.00 0.00 45.30 4.70
3618 4790 2.445654 GGGGAGGAGAGCAGGAGG 60.446 72.222 0.00 0.00 0.00 4.30
3619 4791 2.837291 CGGGGAGGAGAGCAGGAG 60.837 72.222 0.00 0.00 0.00 3.69
3620 4792 3.663815 GACGGGGAGGAGAGCAGGA 62.664 68.421 0.00 0.00 0.00 3.86
3621 4793 3.151022 GACGGGGAGGAGAGCAGG 61.151 72.222 0.00 0.00 0.00 4.85
3622 4794 3.522731 CGACGGGGAGGAGAGCAG 61.523 72.222 0.00 0.00 0.00 4.24
3623 4795 3.997400 CTCGACGGGGAGGAGAGCA 62.997 68.421 0.00 0.00 0.00 4.26
3624 4796 2.605854 TACTCGACGGGGAGGAGAGC 62.606 65.000 0.00 0.00 38.39 4.09
3625 4797 0.533308 CTACTCGACGGGGAGGAGAG 60.533 65.000 10.78 1.72 46.17 3.20
3626 4798 1.525923 CTACTCGACGGGGAGGAGA 59.474 63.158 10.78 0.00 46.17 3.71
3627 4799 2.188161 GCTACTCGACGGGGAGGAG 61.188 68.421 9.51 11.69 46.04 3.69
3628 4800 2.124403 GCTACTCGACGGGGAGGA 60.124 66.667 9.51 0.37 38.39 3.71
3629 4801 2.439701 TGCTACTCGACGGGGAGG 60.440 66.667 9.51 0.00 38.39 4.30
3630 4802 2.799371 GTGCTACTCGACGGGGAG 59.201 66.667 1.32 1.32 39.97 4.30
3631 4803 3.129502 CGTGCTACTCGACGGGGA 61.130 66.667 0.00 0.00 31.84 4.81
3635 4807 4.111016 TGGCCGTGCTACTCGACG 62.111 66.667 0.00 0.00 35.31 5.12
3636 4808 2.506438 GTGGCCGTGCTACTCGAC 60.506 66.667 0.00 0.00 37.08 4.20
3637 4809 3.755628 GGTGGCCGTGCTACTCGA 61.756 66.667 11.04 0.00 39.93 4.04
3638 4810 4.814294 GGGTGGCCGTGCTACTCG 62.814 72.222 11.04 0.00 39.93 4.18
3639 4811 4.468689 GGGGTGGCCGTGCTACTC 62.469 72.222 11.04 7.77 39.84 2.59
3648 4820 4.115199 CTAGCTGGTGGGGTGGCC 62.115 72.222 0.00 0.00 0.00 5.36
3649 4821 4.803908 GCTAGCTGGTGGGGTGGC 62.804 72.222 7.70 0.00 34.47 5.01
3650 4822 3.011517 AGCTAGCTGGTGGGGTGG 61.012 66.667 18.57 0.00 0.00 4.61
3651 4823 2.270205 CAGCTAGCTGGTGGGGTG 59.730 66.667 33.06 9.31 40.17 4.61
3652 4824 3.721706 GCAGCTAGCTGGTGGGGT 61.722 66.667 38.52 4.88 43.77 4.95
3670 4842 2.626780 GGTTTGGAGAAGCACGGGC 61.627 63.158 0.00 0.00 41.61 6.13
3671 4843 1.228124 TGGTTTGGAGAAGCACGGG 60.228 57.895 0.00 0.00 0.00 5.28
3672 4844 1.949257 GTGGTTTGGAGAAGCACGG 59.051 57.895 5.49 0.00 38.61 4.94
3674 4846 1.197721 CGATGTGGTTTGGAGAAGCAC 59.802 52.381 12.62 12.62 45.76 4.40
3675 4847 1.522668 CGATGTGGTTTGGAGAAGCA 58.477 50.000 0.00 0.00 0.00 3.91
3676 4848 0.169009 GCGATGTGGTTTGGAGAAGC 59.831 55.000 0.00 0.00 0.00 3.86
3677 4849 0.804989 GGCGATGTGGTTTGGAGAAG 59.195 55.000 0.00 0.00 0.00 2.85
3678 4850 0.400213 AGGCGATGTGGTTTGGAGAA 59.600 50.000 0.00 0.00 0.00 2.87
3679 4851 0.400213 AAGGCGATGTGGTTTGGAGA 59.600 50.000 0.00 0.00 0.00 3.71
3680 4852 2.009774 CTAAGGCGATGTGGTTTGGAG 58.990 52.381 0.00 0.00 0.00 3.86
3681 4853 1.339631 CCTAAGGCGATGTGGTTTGGA 60.340 52.381 0.00 0.00 0.00 3.53
3682 4854 1.094785 CCTAAGGCGATGTGGTTTGG 58.905 55.000 0.00 0.00 0.00 3.28
3683 4855 0.451783 GCCTAAGGCGATGTGGTTTG 59.548 55.000 0.00 0.00 39.62 2.93
3684 4856 2.868253 GCCTAAGGCGATGTGGTTT 58.132 52.632 0.00 0.00 39.62 3.27
3685 4857 4.637771 GCCTAAGGCGATGTGGTT 57.362 55.556 0.00 0.00 39.62 3.67
3695 4867 2.241176 TCCCATTGTACAAGGCCTAAGG 59.759 50.000 14.66 9.98 0.00 2.69
3696 4868 3.199946 TCTCCCATTGTACAAGGCCTAAG 59.800 47.826 14.66 4.24 0.00 2.18
3697 4869 3.186283 TCTCCCATTGTACAAGGCCTAA 58.814 45.455 14.66 0.00 0.00 2.69
3698 4870 2.840511 TCTCCCATTGTACAAGGCCTA 58.159 47.619 14.66 1.57 0.00 3.93
3699 4871 1.668826 TCTCCCATTGTACAAGGCCT 58.331 50.000 14.66 0.00 0.00 5.19
3700 4872 2.301346 CATCTCCCATTGTACAAGGCC 58.699 52.381 14.66 0.00 0.00 5.19
3701 4873 3.004752 ACATCTCCCATTGTACAAGGC 57.995 47.619 14.66 0.00 0.00 4.35
3702 4874 6.095440 CCTTAAACATCTCCCATTGTACAAGG 59.905 42.308 14.65 13.92 33.87 3.61
3703 4875 6.884295 TCCTTAAACATCTCCCATTGTACAAG 59.116 38.462 14.65 6.30 0.00 3.16
3704 4876 6.785076 TCCTTAAACATCTCCCATTGTACAA 58.215 36.000 11.41 11.41 0.00 2.41
3705 4877 6.381498 TCCTTAAACATCTCCCATTGTACA 57.619 37.500 0.00 0.00 0.00 2.90
3706 4878 5.823045 CCTCCTTAAACATCTCCCATTGTAC 59.177 44.000 0.00 0.00 0.00 2.90
3707 4879 5.491078 ACCTCCTTAAACATCTCCCATTGTA 59.509 40.000 0.00 0.00 0.00 2.41
3708 4880 4.292306 ACCTCCTTAAACATCTCCCATTGT 59.708 41.667 0.00 0.00 0.00 2.71
3709 4881 4.641989 CACCTCCTTAAACATCTCCCATTG 59.358 45.833 0.00 0.00 0.00 2.82
3710 4882 4.860022 CACCTCCTTAAACATCTCCCATT 58.140 43.478 0.00 0.00 0.00 3.16
3711 4883 3.372025 GCACCTCCTTAAACATCTCCCAT 60.372 47.826 0.00 0.00 0.00 4.00
3712 4884 2.026262 GCACCTCCTTAAACATCTCCCA 60.026 50.000 0.00 0.00 0.00 4.37
3713 4885 2.239907 AGCACCTCCTTAAACATCTCCC 59.760 50.000 0.00 0.00 0.00 4.30
3714 4886 3.636153 AGCACCTCCTTAAACATCTCC 57.364 47.619 0.00 0.00 0.00 3.71
3715 4887 7.448748 TTTTAAGCACCTCCTTAAACATCTC 57.551 36.000 6.60 0.00 43.28 2.75
3716 4888 7.833285 TTTTTAAGCACCTCCTTAAACATCT 57.167 32.000 6.60 0.00 43.28 2.90
3738 4910 6.702723 GCTACAGAAAAACCCGGTTTATTTTT 59.297 34.615 16.03 6.68 38.03 1.94
3739 4911 6.183360 TGCTACAGAAAAACCCGGTTTATTTT 60.183 34.615 16.03 7.04 34.43 1.82
3740 4912 5.302313 TGCTACAGAAAAACCCGGTTTATTT 59.698 36.000 16.03 7.76 34.43 1.40
3741 4913 4.828387 TGCTACAGAAAAACCCGGTTTATT 59.172 37.500 16.03 11.90 34.43 1.40
3742 4914 4.216902 GTGCTACAGAAAAACCCGGTTTAT 59.783 41.667 16.03 3.02 34.43 1.40
3743 4915 3.565063 GTGCTACAGAAAAACCCGGTTTA 59.435 43.478 16.03 0.00 34.43 2.01
3744 4916 2.359848 GTGCTACAGAAAAACCCGGTTT 59.640 45.455 9.92 9.92 37.34 3.27
3745 4917 1.951602 GTGCTACAGAAAAACCCGGTT 59.048 47.619 0.00 0.00 0.00 4.44
3746 4918 1.142262 AGTGCTACAGAAAAACCCGGT 59.858 47.619 0.00 0.00 0.00 5.28
3747 4919 1.535462 CAGTGCTACAGAAAAACCCGG 59.465 52.381 0.00 0.00 0.00 5.73
3748 4920 1.535462 CCAGTGCTACAGAAAAACCCG 59.465 52.381 0.00 0.00 0.00 5.28
3749 4921 2.293399 CACCAGTGCTACAGAAAAACCC 59.707 50.000 0.00 0.00 0.00 4.11
3750 4922 2.949644 ACACCAGTGCTACAGAAAAACC 59.050 45.455 0.00 0.00 0.00 3.27
3751 4923 3.877508 AGACACCAGTGCTACAGAAAAAC 59.122 43.478 0.00 0.00 0.00 2.43
3752 4924 4.150897 AGACACCAGTGCTACAGAAAAA 57.849 40.909 0.00 0.00 0.00 1.94
3753 4925 3.838244 AGACACCAGTGCTACAGAAAA 57.162 42.857 0.00 0.00 0.00 2.29
3754 4926 5.483685 AATAGACACCAGTGCTACAGAAA 57.516 39.130 0.00 0.00 0.00 2.52
3755 4927 5.246203 AGAAATAGACACCAGTGCTACAGAA 59.754 40.000 0.00 0.00 0.00 3.02
3756 4928 4.772624 AGAAATAGACACCAGTGCTACAGA 59.227 41.667 0.00 0.00 0.00 3.41
3757 4929 5.078411 AGAAATAGACACCAGTGCTACAG 57.922 43.478 0.00 0.00 0.00 2.74
3758 4930 6.791867 ATAGAAATAGACACCAGTGCTACA 57.208 37.500 0.00 0.00 0.00 2.74
3759 4931 7.230913 TCCTATAGAAATAGACACCAGTGCTAC 59.769 40.741 0.00 0.00 37.84 3.58
3760 4932 7.295340 TCCTATAGAAATAGACACCAGTGCTA 58.705 38.462 0.00 1.54 37.84 3.49
3761 4933 6.136857 TCCTATAGAAATAGACACCAGTGCT 58.863 40.000 0.00 0.00 37.84 4.40
3762 4934 6.265649 TCTCCTATAGAAATAGACACCAGTGC 59.734 42.308 0.00 0.00 37.84 4.40
3763 4935 7.721842 TCTCTCCTATAGAAATAGACACCAGTG 59.278 40.741 0.00 0.00 37.84 3.66
3764 4936 7.817440 TCTCTCCTATAGAAATAGACACCAGT 58.183 38.462 0.00 0.00 37.84 4.00
3765 4937 8.739039 CATCTCTCCTATAGAAATAGACACCAG 58.261 40.741 0.00 0.00 37.84 4.00
3766 4938 7.177568 GCATCTCTCCTATAGAAATAGACACCA 59.822 40.741 0.00 0.00 37.84 4.17
3767 4939 7.396055 AGCATCTCTCCTATAGAAATAGACACC 59.604 40.741 0.00 0.00 37.84 4.16
3768 4940 8.348285 AGCATCTCTCCTATAGAAATAGACAC 57.652 38.462 0.00 0.00 37.84 3.67
3769 4941 8.948401 AAGCATCTCTCCTATAGAAATAGACA 57.052 34.615 0.00 0.00 37.84 3.41
3792 4964 4.715527 ACAGGGTAGACGCTTAACTAAG 57.284 45.455 0.00 0.00 37.00 2.18
3793 4965 5.009631 TGTACAGGGTAGACGCTTAACTAA 58.990 41.667 0.00 0.00 37.00 2.24
3794 4966 4.588899 TGTACAGGGTAGACGCTTAACTA 58.411 43.478 0.00 0.00 37.00 2.24
3795 4967 3.424703 TGTACAGGGTAGACGCTTAACT 58.575 45.455 0.00 0.00 37.00 2.24
3796 4968 3.855689 TGTACAGGGTAGACGCTTAAC 57.144 47.619 0.00 0.00 37.00 2.01
3797 4969 4.870123 TTTGTACAGGGTAGACGCTTAA 57.130 40.909 0.00 0.00 37.00 1.85
3798 4970 6.528537 TTATTTGTACAGGGTAGACGCTTA 57.471 37.500 0.00 0.00 37.00 3.09
3799 4971 3.975168 ATTTGTACAGGGTAGACGCTT 57.025 42.857 0.00 0.00 37.00 4.68
3800 4972 4.679905 GCTTATTTGTACAGGGTAGACGCT 60.680 45.833 0.00 0.00 39.95 5.07
3801 4973 3.554731 GCTTATTTGTACAGGGTAGACGC 59.445 47.826 0.00 0.00 0.00 5.19
3802 4974 4.565564 GTGCTTATTTGTACAGGGTAGACG 59.434 45.833 0.00 0.00 0.00 4.18
3803 4975 4.874396 GGTGCTTATTTGTACAGGGTAGAC 59.126 45.833 0.00 0.00 0.00 2.59
3804 4976 4.382254 CGGTGCTTATTTGTACAGGGTAGA 60.382 45.833 0.00 0.00 0.00 2.59
3805 4977 3.869246 CGGTGCTTATTTGTACAGGGTAG 59.131 47.826 0.00 0.00 0.00 3.18
3806 4978 3.369681 CCGGTGCTTATTTGTACAGGGTA 60.370 47.826 0.00 0.00 35.20 3.69
3807 4979 2.617021 CCGGTGCTTATTTGTACAGGGT 60.617 50.000 0.00 0.00 35.20 4.34
3808 4980 2.014128 CCGGTGCTTATTTGTACAGGG 58.986 52.381 0.00 0.00 35.20 4.45
3809 4981 2.418628 CACCGGTGCTTATTTGTACAGG 59.581 50.000 24.02 0.00 41.71 4.00
3810 4982 3.740044 CACCGGTGCTTATTTGTACAG 57.260 47.619 24.02 0.00 0.00 2.74
3823 4995 3.081804 AGGATTTTCTTAAGCACCGGTG 58.918 45.455 30.66 30.66 0.00 4.94
3824 4996 3.081804 CAGGATTTTCTTAAGCACCGGT 58.918 45.455 0.00 0.00 0.00 5.28
3825 4997 3.343617 TCAGGATTTTCTTAAGCACCGG 58.656 45.455 0.00 0.00 0.00 5.28
3826 4998 5.567138 AATCAGGATTTTCTTAAGCACCG 57.433 39.130 0.00 0.00 0.00 4.94
3827 4999 9.875691 AAATAAATCAGGATTTTCTTAAGCACC 57.124 29.630 12.06 0.00 40.99 5.01
3838 5010 9.875691 GGTGCTTAGAAAAATAAATCAGGATTT 57.124 29.630 11.59 11.59 42.95 2.17
3839 5011 9.259832 AGGTGCTTAGAAAAATAAATCAGGATT 57.740 29.630 0.00 0.00 0.00 3.01
3840 5012 8.829373 AGGTGCTTAGAAAAATAAATCAGGAT 57.171 30.769 0.00 0.00 0.00 3.24
3841 5013 8.109634 AGAGGTGCTTAGAAAAATAAATCAGGA 58.890 33.333 0.00 0.00 0.00 3.86
3842 5014 8.286191 AGAGGTGCTTAGAAAAATAAATCAGG 57.714 34.615 0.00 0.00 0.00 3.86
3843 5015 8.401709 GGAGAGGTGCTTAGAAAAATAAATCAG 58.598 37.037 0.00 0.00 0.00 2.90
3844 5016 8.109634 AGGAGAGGTGCTTAGAAAAATAAATCA 58.890 33.333 0.00 0.00 0.00 2.57
3845 5017 8.512966 AGGAGAGGTGCTTAGAAAAATAAATC 57.487 34.615 0.00 0.00 0.00 2.17
3846 5018 9.975218 TTAGGAGAGGTGCTTAGAAAAATAAAT 57.025 29.630 0.00 0.00 0.00 1.40
3847 5019 9.449719 CTTAGGAGAGGTGCTTAGAAAAATAAA 57.550 33.333 0.00 0.00 0.00 1.40
3848 5020 7.553044 GCTTAGGAGAGGTGCTTAGAAAAATAA 59.447 37.037 0.00 0.00 0.00 1.40
3849 5021 7.048512 GCTTAGGAGAGGTGCTTAGAAAAATA 58.951 38.462 0.00 0.00 0.00 1.40
3850 5022 5.883115 GCTTAGGAGAGGTGCTTAGAAAAAT 59.117 40.000 0.00 0.00 0.00 1.82
3851 5023 5.221843 TGCTTAGGAGAGGTGCTTAGAAAAA 60.222 40.000 0.00 0.00 0.00 1.94
3852 5024 4.286032 TGCTTAGGAGAGGTGCTTAGAAAA 59.714 41.667 0.00 0.00 0.00 2.29
3853 5025 3.838317 TGCTTAGGAGAGGTGCTTAGAAA 59.162 43.478 0.00 0.00 0.00 2.52
3854 5026 3.441101 TGCTTAGGAGAGGTGCTTAGAA 58.559 45.455 0.00 0.00 0.00 2.10
3855 5027 3.101643 TGCTTAGGAGAGGTGCTTAGA 57.898 47.619 0.00 0.00 0.00 2.10
3856 5028 3.640967 AGATGCTTAGGAGAGGTGCTTAG 59.359 47.826 0.00 0.00 0.00 2.18
3857 5029 3.639094 GAGATGCTTAGGAGAGGTGCTTA 59.361 47.826 0.00 0.00 0.00 3.09
3858 5030 2.433970 GAGATGCTTAGGAGAGGTGCTT 59.566 50.000 0.00 0.00 0.00 3.91
3859 5031 2.038659 GAGATGCTTAGGAGAGGTGCT 58.961 52.381 0.00 0.00 0.00 4.40
3860 5032 1.069978 GGAGATGCTTAGGAGAGGTGC 59.930 57.143 0.00 0.00 0.00 5.01
3861 5033 1.691434 GGGAGATGCTTAGGAGAGGTG 59.309 57.143 0.00 0.00 0.00 4.00
3862 5034 1.292242 TGGGAGATGCTTAGGAGAGGT 59.708 52.381 0.00 0.00 0.00 3.85
3863 5035 2.094100 TGGGAGATGCTTAGGAGAGG 57.906 55.000 0.00 0.00 0.00 3.69
3864 5036 3.390639 ACAATGGGAGATGCTTAGGAGAG 59.609 47.826 0.00 0.00 0.00 3.20
3865 5037 3.387962 ACAATGGGAGATGCTTAGGAGA 58.612 45.455 0.00 0.00 0.00 3.71
3866 5038 3.853355 ACAATGGGAGATGCTTAGGAG 57.147 47.619 0.00 0.00 0.00 3.69
3867 5039 4.037222 TGTACAATGGGAGATGCTTAGGA 58.963 43.478 0.00 0.00 0.00 2.94
3868 5040 4.422073 TGTACAATGGGAGATGCTTAGG 57.578 45.455 0.00 0.00 0.00 2.69
3869 5041 4.818546 CCTTGTACAATGGGAGATGCTTAG 59.181 45.833 9.13 0.00 0.00 2.18
3870 5042 4.227300 ACCTTGTACAATGGGAGATGCTTA 59.773 41.667 18.16 0.00 0.00 3.09
3871 5043 3.010584 ACCTTGTACAATGGGAGATGCTT 59.989 43.478 18.16 0.00 0.00 3.91
3872 5044 2.578021 ACCTTGTACAATGGGAGATGCT 59.422 45.455 18.16 0.00 0.00 3.79
3873 5045 3.004752 ACCTTGTACAATGGGAGATGC 57.995 47.619 18.16 0.00 0.00 3.91
3874 5046 6.263168 GGATAAACCTTGTACAATGGGAGATG 59.737 42.308 18.16 1.25 35.41 2.90
3875 5047 6.069088 TGGATAAACCTTGTACAATGGGAGAT 60.069 38.462 18.16 11.43 39.86 2.75
3876 5048 5.251932 TGGATAAACCTTGTACAATGGGAGA 59.748 40.000 18.16 8.10 39.86 3.71
3877 5049 5.357032 GTGGATAAACCTTGTACAATGGGAG 59.643 44.000 18.16 3.01 39.86 4.30
3878 5050 5.014755 AGTGGATAAACCTTGTACAATGGGA 59.985 40.000 18.16 8.64 39.86 4.37
3879 5051 5.125417 CAGTGGATAAACCTTGTACAATGGG 59.875 44.000 20.95 16.79 39.86 4.00
3880 5052 5.943416 TCAGTGGATAAACCTTGTACAATGG 59.057 40.000 9.13 14.40 39.86 3.16
3881 5053 7.475015 CATCAGTGGATAAACCTTGTACAATG 58.525 38.462 9.13 9.11 39.86 2.82
3882 5054 6.095440 GCATCAGTGGATAAACCTTGTACAAT 59.905 38.462 9.13 0.00 39.86 2.71
3883 5055 5.414454 GCATCAGTGGATAAACCTTGTACAA 59.586 40.000 8.28 8.28 39.86 2.41
3884 5056 4.941263 GCATCAGTGGATAAACCTTGTACA 59.059 41.667 0.00 0.00 39.86 2.90
3885 5057 4.941263 TGCATCAGTGGATAAACCTTGTAC 59.059 41.667 0.00 0.00 39.86 2.90
3886 5058 5.172687 TGCATCAGTGGATAAACCTTGTA 57.827 39.130 0.00 0.00 39.86 2.41
3887 5059 4.032960 TGCATCAGTGGATAAACCTTGT 57.967 40.909 0.00 0.00 39.86 3.16
3888 5060 4.380867 GGTTGCATCAGTGGATAAACCTTG 60.381 45.833 11.39 0.00 41.65 3.61
3889 5061 3.763897 GGTTGCATCAGTGGATAAACCTT 59.236 43.478 11.39 0.00 41.65 3.50
3890 5062 3.356290 GGTTGCATCAGTGGATAAACCT 58.644 45.455 11.39 0.00 41.65 3.50
3891 5063 2.427095 GGGTTGCATCAGTGGATAAACC 59.573 50.000 10.67 10.67 42.86 3.27
3892 5064 2.427095 GGGGTTGCATCAGTGGATAAAC 59.573 50.000 0.00 0.00 32.48 2.01
3893 5065 2.622977 GGGGGTTGCATCAGTGGATAAA 60.623 50.000 0.00 0.00 30.87 1.40
3894 5066 1.064017 GGGGGTTGCATCAGTGGATAA 60.064 52.381 0.00 0.00 30.87 1.75
3895 5067 0.550914 GGGGGTTGCATCAGTGGATA 59.449 55.000 0.00 0.00 30.87 2.59
3896 5068 1.307647 GGGGGTTGCATCAGTGGAT 59.692 57.895 0.00 0.00 0.00 3.41
3897 5069 2.763215 GGGGGTTGCATCAGTGGA 59.237 61.111 0.00 0.00 0.00 4.02
3914 5086 4.619227 ACCAGTGTTGTCGCCCGG 62.619 66.667 0.00 0.00 0.00 5.73
3915 5087 3.345808 CACCAGTGTTGTCGCCCG 61.346 66.667 0.00 0.00 0.00 6.13
3916 5088 3.660111 GCACCAGTGTTGTCGCCC 61.660 66.667 0.00 0.00 0.00 6.13
3917 5089 4.012895 CGCACCAGTGTTGTCGCC 62.013 66.667 0.00 0.00 0.00 5.54
3918 5090 4.666532 GCGCACCAGTGTTGTCGC 62.667 66.667 0.30 12.02 35.82 5.19
3919 5091 4.012895 GGCGCACCAGTGTTGTCG 62.013 66.667 10.83 1.31 35.26 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.