Multiple sequence alignment - TraesCS3D01G083500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G083500 chr3D 100.000 3933 0 0 1 3933 42386404 42390336 0.000000e+00 7263
1 TraesCS3D01G083500 chr3D 86.087 230 16 7 3453 3673 42402412 42402634 2.360000e-57 233
2 TraesCS3D01G083500 chr3A 89.395 1735 86 30 1626 3310 53324785 53323099 0.000000e+00 2095
3 TraesCS3D01G083500 chr3A 87.466 1117 68 31 520 1614 53325834 53324768 0.000000e+00 1221
4 TraesCS3D01G083500 chr3A 94.928 138 7 0 3667 3804 53297229 53297092 2.380000e-52 217
5 TraesCS3D01G083500 chr3A 94.928 138 4 1 3316 3453 53323022 53322888 3.080000e-51 213
6 TraesCS3D01G083500 chr3A 89.744 78 6 1 456 531 53325929 53325852 8.990000e-17 99
7 TraesCS3D01G083500 chr3B 89.436 833 40 15 1626 2438 65348440 65347636 0.000000e+00 1007
8 TraesCS3D01G083500 chr3B 87.022 732 57 19 761 1478 65349453 65348746 0.000000e+00 791
9 TraesCS3D01G083500 chr3B 84.750 741 66 26 2537 3257 65347600 65346887 0.000000e+00 699
10 TraesCS3D01G083500 chr3B 89.038 447 23 9 1 439 554090853 554091281 7.480000e-147 531
11 TraesCS3D01G083500 chr3B 79.925 533 42 26 3464 3933 65342236 65341706 8.150000e-87 331
12 TraesCS3D01G083500 chr3B 80.879 387 35 19 3456 3804 65332010 65331625 6.480000e-68 268
13 TraesCS3D01G083500 chr3B 90.741 108 8 1 613 720 65351634 65351529 4.100000e-30 143
14 TraesCS3D01G083500 chr3B 86.719 128 9 4 3807 3933 697981452 697981572 6.860000e-28 135
15 TraesCS3D01G083500 chr3B 89.130 92 4 3 457 543 65351731 65351641 4.160000e-20 110
16 TraesCS3D01G083500 chr3B 80.272 147 20 6 3537 3675 18674850 18674995 6.950000e-18 102
17 TraesCS3D01G083500 chr7D 92.188 448 26 5 1 439 163929493 163929046 3.340000e-175 625
18 TraesCS3D01G083500 chr7D 91.910 445 27 5 4 439 163964420 163963976 7.220000e-172 614
19 TraesCS3D01G083500 chr6D 91.295 448 29 6 1 439 443258763 443259209 1.560000e-168 603
20 TraesCS3D01G083500 chr7B 81.347 386 35 13 3454 3804 141016669 141017052 2.990000e-71 279
21 TraesCS3D01G083500 chr7A 81.347 386 35 17 3454 3804 547089889 547090272 2.990000e-71 279
22 TraesCS3D01G083500 chr1A 81.347 386 34 16 3454 3804 488100762 488100380 2.990000e-71 279
23 TraesCS3D01G083500 chr1A 83.628 226 27 5 3456 3671 64835339 64835114 1.850000e-48 204
24 TraesCS3D01G083500 chrUn 80.707 368 32 24 3473 3804 94242460 94242824 2.350000e-62 250
25 TraesCS3D01G083500 chrUn 80.272 147 20 6 3537 3675 323304101 323304246 6.950000e-18 102
26 TraesCS3D01G083500 chr2B 92.029 138 11 0 3667 3804 635080952 635080815 1.120000e-45 195
27 TraesCS3D01G083500 chr2A 89.933 149 13 1 3656 3804 43179362 43179216 1.440000e-44 191
28 TraesCS3D01G083500 chr5A 82.589 224 29 5 3458 3671 565725307 565725530 5.190000e-44 189
29 TraesCS3D01G083500 chr2D 79.070 215 35 7 3467 3671 637893901 637894115 5.300000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G083500 chr3D 42386404 42390336 3932 False 7263 7263 100.00000 1 3933 1 chr3D.!!$F1 3932
1 TraesCS3D01G083500 chr3A 53322888 53325929 3041 True 907 2095 90.38325 456 3453 4 chr3A.!!$R2 2997
2 TraesCS3D01G083500 chr3B 65346887 65351731 4844 True 550 1007 88.21580 457 3257 5 chr3B.!!$R3 2800
3 TraesCS3D01G083500 chr3B 65341706 65342236 530 True 331 331 79.92500 3464 3933 1 chr3B.!!$R2 469

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
298 299 0.032952 GTGCTGGACAACTACGGTGA 59.967 55.0 0.00 0.0 0.0 4.02 F
402 403 0.037790 ACGAGCAGGAGAAGAACAGC 60.038 55.0 0.00 0.0 0.0 4.40 F
403 404 0.037882 CGAGCAGGAGAAGAACAGCA 60.038 55.0 0.00 0.0 0.0 4.41 F
750 2845 0.038892 ACGTACGTGCAACCGATTCT 60.039 50.0 22.14 0.0 0.0 2.40 F
1412 3528 0.179089 CCTCTTGCTCCGATCTGTGG 60.179 60.0 0.00 0.0 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1391 3506 0.534412 ACAGATCGGAGCAAGAGGTG 59.466 55.000 0.00 0.00 0.00 4.00 R
2398 4725 0.742505 CGCGGTAAGAGTGGATGGTA 59.257 55.000 0.00 0.00 0.00 3.25 R
2402 4729 1.378882 TACGCGCGGTAAGAGTGGAT 61.379 55.000 35.22 10.75 34.36 3.41 R
2480 4820 1.227943 CGATCGGCCATGGTTCCAT 60.228 57.895 14.67 0.14 0.00 3.41 R
2960 5341 0.179043 TCACGGCACCAACAAAGCTA 60.179 50.000 0.00 0.00 0.00 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.545208 TGATTCCGACAGAAATACCACA 57.455 40.909 0.00 0.00 38.21 4.17
22 23 5.097742 TGATTCCGACAGAAATACCACAT 57.902 39.130 0.00 0.00 38.21 3.21
23 24 5.116180 TGATTCCGACAGAAATACCACATC 58.884 41.667 0.00 0.00 38.21 3.06
24 25 3.536956 TCCGACAGAAATACCACATCC 57.463 47.619 0.00 0.00 0.00 3.51
25 26 2.159156 TCCGACAGAAATACCACATCCG 60.159 50.000 0.00 0.00 0.00 4.18
26 27 1.593006 CGACAGAAATACCACATCCGC 59.407 52.381 0.00 0.00 0.00 5.54
27 28 2.738643 CGACAGAAATACCACATCCGCT 60.739 50.000 0.00 0.00 0.00 5.52
28 29 3.270877 GACAGAAATACCACATCCGCTT 58.729 45.455 0.00 0.00 0.00 4.68
29 30 3.686016 ACAGAAATACCACATCCGCTTT 58.314 40.909 0.00 0.00 0.00 3.51
30 31 3.689649 ACAGAAATACCACATCCGCTTTC 59.310 43.478 0.00 0.00 0.00 2.62
31 32 3.689161 CAGAAATACCACATCCGCTTTCA 59.311 43.478 0.00 0.00 0.00 2.69
32 33 3.941483 AGAAATACCACATCCGCTTTCAG 59.059 43.478 0.00 0.00 0.00 3.02
33 34 1.668419 ATACCACATCCGCTTTCAGC 58.332 50.000 0.00 0.00 38.02 4.26
34 35 0.613260 TACCACATCCGCTTTCAGCT 59.387 50.000 0.00 0.00 39.60 4.24
35 36 0.957395 ACCACATCCGCTTTCAGCTG 60.957 55.000 7.63 7.63 39.60 4.24
36 37 1.136147 CACATCCGCTTTCAGCTGC 59.864 57.895 9.47 0.00 39.60 5.25
37 38 2.042831 ACATCCGCTTTCAGCTGCC 61.043 57.895 9.47 0.00 39.60 4.85
38 39 2.439156 ATCCGCTTTCAGCTGCCC 60.439 61.111 9.47 0.00 39.60 5.36
39 40 2.976490 ATCCGCTTTCAGCTGCCCT 61.976 57.895 9.47 0.00 39.60 5.19
40 41 2.490270 ATCCGCTTTCAGCTGCCCTT 62.490 55.000 9.47 0.00 39.60 3.95
41 42 2.564975 CGCTTTCAGCTGCCCTTG 59.435 61.111 9.47 0.00 39.60 3.61
42 43 2.968206 GCTTTCAGCTGCCCTTGG 59.032 61.111 9.47 0.00 38.45 3.61
43 44 1.604593 GCTTTCAGCTGCCCTTGGA 60.605 57.895 9.47 0.00 38.45 3.53
44 45 1.593296 GCTTTCAGCTGCCCTTGGAG 61.593 60.000 9.47 0.03 38.45 3.86
45 46 0.037303 CTTTCAGCTGCCCTTGGAGA 59.963 55.000 9.47 0.00 0.00 3.71
46 47 0.700564 TTTCAGCTGCCCTTGGAGAT 59.299 50.000 9.47 0.00 0.00 2.75
47 48 0.254178 TTCAGCTGCCCTTGGAGATC 59.746 55.000 9.47 0.00 0.00 2.75
48 49 1.153005 CAGCTGCCCTTGGAGATCC 60.153 63.158 0.00 0.00 0.00 3.36
49 50 1.617536 AGCTGCCCTTGGAGATCCA 60.618 57.895 0.00 0.00 45.94 3.41
70 71 2.434428 AGAGCTCTTGAATTGCTGTGG 58.566 47.619 11.45 0.00 37.16 4.17
71 72 1.471684 GAGCTCTTGAATTGCTGTGGG 59.528 52.381 6.43 0.00 37.16 4.61
72 73 0.108945 GCTCTTGAATTGCTGTGGGC 60.109 55.000 0.00 0.00 42.22 5.36
73 74 0.169672 CTCTTGAATTGCTGTGGGCG 59.830 55.000 0.00 0.00 45.43 6.13
74 75 0.250684 TCTTGAATTGCTGTGGGCGA 60.251 50.000 0.00 0.00 45.43 5.54
75 76 0.597568 CTTGAATTGCTGTGGGCGAA 59.402 50.000 0.00 0.00 45.43 4.70
76 77 1.000385 CTTGAATTGCTGTGGGCGAAA 60.000 47.619 0.00 0.00 45.43 3.46
77 78 0.597568 TGAATTGCTGTGGGCGAAAG 59.402 50.000 0.00 0.00 45.43 2.62
89 90 3.262936 CGAAAGCATTCCACGGCA 58.737 55.556 0.00 0.00 31.52 5.69
90 91 1.578926 CGAAAGCATTCCACGGCAA 59.421 52.632 0.00 0.00 31.52 4.52
91 92 0.171007 CGAAAGCATTCCACGGCAAT 59.829 50.000 0.00 0.00 31.52 3.56
92 93 1.402720 CGAAAGCATTCCACGGCAATT 60.403 47.619 0.00 0.00 31.52 2.32
93 94 2.262211 GAAAGCATTCCACGGCAATTC 58.738 47.619 0.00 0.00 0.00 2.17
94 95 0.532115 AAGCATTCCACGGCAATTCC 59.468 50.000 0.00 0.00 0.00 3.01
95 96 0.611618 AGCATTCCACGGCAATTCCA 60.612 50.000 0.00 0.00 34.01 3.53
96 97 0.458370 GCATTCCACGGCAATTCCAC 60.458 55.000 0.00 0.00 34.01 4.02
97 98 0.179166 CATTCCACGGCAATTCCACG 60.179 55.000 0.00 0.00 34.01 4.94
98 99 1.933115 ATTCCACGGCAATTCCACGC 61.933 55.000 0.00 0.00 34.01 5.34
99 100 3.055719 CCACGGCAATTCCACGCT 61.056 61.111 0.00 0.00 34.01 5.07
100 101 1.743623 CCACGGCAATTCCACGCTA 60.744 57.895 0.00 0.00 34.01 4.26
101 102 1.302383 CCACGGCAATTCCACGCTAA 61.302 55.000 0.00 0.00 34.01 3.09
102 103 0.096976 CACGGCAATTCCACGCTAAG 59.903 55.000 0.00 0.00 34.01 2.18
103 104 1.024579 ACGGCAATTCCACGCTAAGG 61.025 55.000 0.00 0.00 34.01 2.69
104 105 1.024579 CGGCAATTCCACGCTAAGGT 61.025 55.000 0.00 0.00 34.01 3.50
105 106 1.173913 GGCAATTCCACGCTAAGGTT 58.826 50.000 0.00 0.00 34.01 3.50
106 107 1.544246 GGCAATTCCACGCTAAGGTTT 59.456 47.619 0.00 0.00 34.01 3.27
107 108 2.029380 GGCAATTCCACGCTAAGGTTTT 60.029 45.455 0.00 0.00 34.01 2.43
108 109 3.242518 GCAATTCCACGCTAAGGTTTTC 58.757 45.455 0.00 0.00 0.00 2.29
109 110 3.305064 GCAATTCCACGCTAAGGTTTTCA 60.305 43.478 0.00 0.00 0.00 2.69
110 111 4.618227 GCAATTCCACGCTAAGGTTTTCAT 60.618 41.667 0.00 0.00 0.00 2.57
111 112 5.469479 CAATTCCACGCTAAGGTTTTCATT 58.531 37.500 0.00 0.00 0.00 2.57
112 113 4.497473 TTCCACGCTAAGGTTTTCATTG 57.503 40.909 0.00 0.00 0.00 2.82
113 114 2.227865 TCCACGCTAAGGTTTTCATTGC 59.772 45.455 0.00 0.00 0.00 3.56
114 115 2.228822 CCACGCTAAGGTTTTCATTGCT 59.771 45.455 0.00 0.00 0.00 3.91
115 116 3.492313 CACGCTAAGGTTTTCATTGCTC 58.508 45.455 0.00 0.00 0.00 4.26
116 117 2.488153 ACGCTAAGGTTTTCATTGCTCC 59.512 45.455 0.00 0.00 0.00 4.70
117 118 2.159379 CGCTAAGGTTTTCATTGCTCCC 60.159 50.000 0.00 0.00 0.00 4.30
118 119 2.159379 GCTAAGGTTTTCATTGCTCCCG 60.159 50.000 0.00 0.00 0.00 5.14
119 120 1.256812 AAGGTTTTCATTGCTCCCGG 58.743 50.000 0.00 0.00 0.00 5.73
120 121 1.215382 GGTTTTCATTGCTCCCGGC 59.785 57.895 0.00 0.00 42.22 6.13
121 122 1.154035 GTTTTCATTGCTCCCGGCG 60.154 57.895 0.00 0.00 45.43 6.46
122 123 1.302913 TTTTCATTGCTCCCGGCGA 60.303 52.632 9.30 0.00 45.43 5.54
123 124 0.679640 TTTTCATTGCTCCCGGCGAT 60.680 50.000 9.30 0.00 45.31 4.58
124 125 1.095228 TTTCATTGCTCCCGGCGATC 61.095 55.000 9.30 0.00 42.75 3.69
125 126 2.940890 TTCATTGCTCCCGGCGATCC 62.941 60.000 9.30 0.00 42.75 3.36
126 127 3.164269 ATTGCTCCCGGCGATCCT 61.164 61.111 9.30 0.00 40.85 3.24
127 128 2.746375 ATTGCTCCCGGCGATCCTT 61.746 57.895 9.30 0.00 40.85 3.36
128 129 2.666596 ATTGCTCCCGGCGATCCTTC 62.667 60.000 9.30 0.00 40.85 3.46
129 130 3.849951 GCTCCCGGCGATCCTTCA 61.850 66.667 9.30 0.00 0.00 3.02
130 131 2.419198 CTCCCGGCGATCCTTCAG 59.581 66.667 9.30 0.00 0.00 3.02
131 132 3.798954 CTCCCGGCGATCCTTCAGC 62.799 68.421 9.30 0.00 0.00 4.26
132 133 3.854669 CCCGGCGATCCTTCAGCT 61.855 66.667 9.30 0.00 0.00 4.24
133 134 2.187946 CCGGCGATCCTTCAGCTT 59.812 61.111 9.30 0.00 0.00 3.74
134 135 1.884926 CCGGCGATCCTTCAGCTTC 60.885 63.158 9.30 0.00 0.00 3.86
135 136 1.884926 CGGCGATCCTTCAGCTTCC 60.885 63.158 0.00 0.00 0.00 3.46
136 137 1.221840 GGCGATCCTTCAGCTTCCA 59.778 57.895 0.00 0.00 0.00 3.53
137 138 1.092345 GGCGATCCTTCAGCTTCCAC 61.092 60.000 0.00 0.00 0.00 4.02
138 139 0.107945 GCGATCCTTCAGCTTCCACT 60.108 55.000 0.00 0.00 0.00 4.00
139 140 1.933247 CGATCCTTCAGCTTCCACTC 58.067 55.000 0.00 0.00 0.00 3.51
140 141 1.800655 CGATCCTTCAGCTTCCACTCG 60.801 57.143 0.00 0.00 0.00 4.18
141 142 1.478510 GATCCTTCAGCTTCCACTCGA 59.521 52.381 0.00 0.00 0.00 4.04
142 143 0.603569 TCCTTCAGCTTCCACTCGAC 59.396 55.000 0.00 0.00 0.00 4.20
143 144 0.318441 CCTTCAGCTTCCACTCGACA 59.682 55.000 0.00 0.00 0.00 4.35
144 145 1.066573 CCTTCAGCTTCCACTCGACAT 60.067 52.381 0.00 0.00 0.00 3.06
145 146 1.998315 CTTCAGCTTCCACTCGACATG 59.002 52.381 0.00 0.00 0.00 3.21
146 147 0.390340 TCAGCTTCCACTCGACATGC 60.390 55.000 0.00 0.00 0.00 4.06
147 148 1.446792 AGCTTCCACTCGACATGCG 60.447 57.895 0.00 0.00 42.69 4.73
148 149 3.084579 CTTCCACTCGACATGCGC 58.915 61.111 0.00 0.00 40.61 6.09
149 150 2.434185 TTCCACTCGACATGCGCC 60.434 61.111 4.18 0.00 40.61 6.53
150 151 4.794439 TCCACTCGACATGCGCCG 62.794 66.667 4.18 0.00 40.61 6.46
157 158 4.520846 GACATGCGCCGCCGAAAG 62.521 66.667 6.63 0.00 36.29 2.62
163 164 4.741781 CGCCGCCGAAAGCTGTTG 62.742 66.667 0.00 0.00 40.39 3.33
164 165 3.353836 GCCGCCGAAAGCTGTTGA 61.354 61.111 0.00 0.00 40.39 3.18
165 166 2.903547 GCCGCCGAAAGCTGTTGAA 61.904 57.895 0.00 0.00 40.39 2.69
166 167 1.082104 CCGCCGAAAGCTGTTGAAC 60.082 57.895 0.00 0.00 40.39 3.18
167 168 1.507141 CCGCCGAAAGCTGTTGAACT 61.507 55.000 0.00 0.00 40.39 3.01
168 169 0.307760 CGCCGAAAGCTGTTGAACTT 59.692 50.000 0.00 0.00 40.39 2.66
169 170 1.660333 CGCCGAAAGCTGTTGAACTTC 60.660 52.381 0.00 0.00 40.39 3.01
170 171 1.333619 GCCGAAAGCTGTTGAACTTCA 59.666 47.619 0.00 0.00 38.99 3.02
171 172 2.030805 GCCGAAAGCTGTTGAACTTCAT 60.031 45.455 0.00 0.00 38.99 2.57
172 173 3.558505 CCGAAAGCTGTTGAACTTCATG 58.441 45.455 0.00 0.00 0.00 3.07
173 174 3.003689 CCGAAAGCTGTTGAACTTCATGT 59.996 43.478 0.00 0.00 0.00 3.21
174 175 4.213270 CCGAAAGCTGTTGAACTTCATGTA 59.787 41.667 0.00 0.00 0.00 2.29
175 176 5.377358 CGAAAGCTGTTGAACTTCATGTAG 58.623 41.667 0.00 0.00 0.00 2.74
176 177 5.050091 CGAAAGCTGTTGAACTTCATGTAGT 60.050 40.000 0.00 0.00 0.00 2.73
177 178 6.145534 CGAAAGCTGTTGAACTTCATGTAGTA 59.854 38.462 5.32 0.00 0.00 1.82
178 179 7.307160 CGAAAGCTGTTGAACTTCATGTAGTAA 60.307 37.037 5.32 0.00 0.00 2.24
179 180 7.801716 AAGCTGTTGAACTTCATGTAGTAAA 57.198 32.000 5.32 1.44 0.00 2.01
180 181 7.426929 AGCTGTTGAACTTCATGTAGTAAAG 57.573 36.000 5.32 0.00 0.00 1.85
181 182 6.992715 AGCTGTTGAACTTCATGTAGTAAAGT 59.007 34.615 5.32 0.00 34.81 2.66
182 183 7.171678 AGCTGTTGAACTTCATGTAGTAAAGTC 59.828 37.037 5.32 0.62 32.24 3.01
183 184 7.042051 GCTGTTGAACTTCATGTAGTAAAGTCA 60.042 37.037 5.32 3.24 32.24 3.41
184 185 8.725405 TGTTGAACTTCATGTAGTAAAGTCAA 57.275 30.769 5.32 8.90 32.24 3.18
185 186 9.168451 TGTTGAACTTCATGTAGTAAAGTCAAA 57.832 29.630 14.95 6.95 32.24 2.69
186 187 9.997482 GTTGAACTTCATGTAGTAAAGTCAAAA 57.003 29.630 14.95 2.42 32.24 2.44
208 209 2.483876 TCTTGACAAAGCAAGAGACGG 58.516 47.619 0.00 0.00 46.73 4.79
209 210 2.102420 TCTTGACAAAGCAAGAGACGGA 59.898 45.455 0.00 0.00 46.73 4.69
210 211 2.613026 TGACAAAGCAAGAGACGGAA 57.387 45.000 0.00 0.00 0.00 4.30
211 212 2.912771 TGACAAAGCAAGAGACGGAAA 58.087 42.857 0.00 0.00 0.00 3.13
212 213 3.275143 TGACAAAGCAAGAGACGGAAAA 58.725 40.909 0.00 0.00 0.00 2.29
213 214 3.064820 TGACAAAGCAAGAGACGGAAAAC 59.935 43.478 0.00 0.00 0.00 2.43
214 215 2.357952 ACAAAGCAAGAGACGGAAAACC 59.642 45.455 0.00 0.00 0.00 3.27
215 216 2.341846 AAGCAAGAGACGGAAAACCA 57.658 45.000 0.00 0.00 0.00 3.67
216 217 2.341846 AGCAAGAGACGGAAAACCAA 57.658 45.000 0.00 0.00 0.00 3.67
217 218 2.863809 AGCAAGAGACGGAAAACCAAT 58.136 42.857 0.00 0.00 0.00 3.16
218 219 2.814336 AGCAAGAGACGGAAAACCAATC 59.186 45.455 0.00 0.00 0.00 2.67
219 220 2.552315 GCAAGAGACGGAAAACCAATCA 59.448 45.455 0.00 0.00 0.00 2.57
220 221 3.609409 GCAAGAGACGGAAAACCAATCAC 60.609 47.826 0.00 0.00 0.00 3.06
221 222 3.485463 AGAGACGGAAAACCAATCACA 57.515 42.857 0.00 0.00 0.00 3.58
222 223 3.403038 AGAGACGGAAAACCAATCACAG 58.597 45.455 0.00 0.00 0.00 3.66
223 224 3.071023 AGAGACGGAAAACCAATCACAGA 59.929 43.478 0.00 0.00 0.00 3.41
224 225 3.813166 GAGACGGAAAACCAATCACAGAA 59.187 43.478 0.00 0.00 0.00 3.02
225 226 3.564225 AGACGGAAAACCAATCACAGAAC 59.436 43.478 0.00 0.00 0.00 3.01
226 227 2.621526 ACGGAAAACCAATCACAGAACC 59.378 45.455 0.00 0.00 0.00 3.62
227 228 2.884639 CGGAAAACCAATCACAGAACCT 59.115 45.455 0.00 0.00 0.00 3.50
228 229 3.058224 CGGAAAACCAATCACAGAACCTC 60.058 47.826 0.00 0.00 0.00 3.85
229 230 3.888930 GGAAAACCAATCACAGAACCTCA 59.111 43.478 0.00 0.00 0.00 3.86
230 231 4.261614 GGAAAACCAATCACAGAACCTCAC 60.262 45.833 0.00 0.00 0.00 3.51
231 232 3.576078 AACCAATCACAGAACCTCACA 57.424 42.857 0.00 0.00 0.00 3.58
232 233 2.851195 ACCAATCACAGAACCTCACAC 58.149 47.619 0.00 0.00 0.00 3.82
233 234 2.172505 ACCAATCACAGAACCTCACACA 59.827 45.455 0.00 0.00 0.00 3.72
234 235 3.213506 CCAATCACAGAACCTCACACAA 58.786 45.455 0.00 0.00 0.00 3.33
235 236 3.003689 CCAATCACAGAACCTCACACAAC 59.996 47.826 0.00 0.00 0.00 3.32
236 237 3.558931 ATCACAGAACCTCACACAACA 57.441 42.857 0.00 0.00 0.00 3.33
237 238 2.905075 TCACAGAACCTCACACAACAG 58.095 47.619 0.00 0.00 0.00 3.16
238 239 2.499693 TCACAGAACCTCACACAACAGA 59.500 45.455 0.00 0.00 0.00 3.41
239 240 2.868583 CACAGAACCTCACACAACAGAG 59.131 50.000 0.00 0.00 0.00 3.35
240 241 2.766263 ACAGAACCTCACACAACAGAGA 59.234 45.455 0.00 0.00 33.74 3.10
241 242 3.389329 ACAGAACCTCACACAACAGAGAT 59.611 43.478 0.00 0.00 33.74 2.75
242 243 3.993081 CAGAACCTCACACAACAGAGATC 59.007 47.826 0.00 0.00 33.74 2.75
243 244 3.007398 AGAACCTCACACAACAGAGATCC 59.993 47.826 0.00 0.00 33.74 3.36
244 245 1.273606 ACCTCACACAACAGAGATCCG 59.726 52.381 0.00 0.00 33.74 4.18
245 246 1.354040 CTCACACAACAGAGATCCGC 58.646 55.000 0.00 0.00 33.74 5.54
246 247 0.388520 TCACACAACAGAGATCCGCG 60.389 55.000 0.00 0.00 0.00 6.46
247 248 0.667487 CACACAACAGAGATCCGCGT 60.667 55.000 4.92 0.00 0.00 6.01
248 249 0.388649 ACACAACAGAGATCCGCGTC 60.389 55.000 4.92 0.00 0.00 5.19
249 250 0.388520 CACAACAGAGATCCGCGTCA 60.389 55.000 4.92 0.00 0.00 4.35
250 251 0.109086 ACAACAGAGATCCGCGTCAG 60.109 55.000 4.92 0.00 0.00 3.51
251 252 0.803768 CAACAGAGATCCGCGTCAGG 60.804 60.000 4.92 0.00 0.00 3.86
252 253 0.965866 AACAGAGATCCGCGTCAGGA 60.966 55.000 4.92 0.00 45.54 3.86
253 254 1.064946 CAGAGATCCGCGTCAGGAC 59.935 63.158 4.92 0.00 44.07 3.85
254 255 1.378646 AGAGATCCGCGTCAGGACA 60.379 57.895 4.92 0.00 44.07 4.02
255 256 0.965866 AGAGATCCGCGTCAGGACAA 60.966 55.000 4.92 0.00 44.07 3.18
256 257 0.108804 GAGATCCGCGTCAGGACAAA 60.109 55.000 4.92 0.00 44.07 2.83
257 258 0.389948 AGATCCGCGTCAGGACAAAC 60.390 55.000 4.92 0.00 44.07 2.93
258 259 0.669318 GATCCGCGTCAGGACAAACA 60.669 55.000 4.92 0.00 44.07 2.83
259 260 0.250124 ATCCGCGTCAGGACAAACAA 60.250 50.000 4.92 0.00 44.07 2.83
260 261 0.462225 TCCGCGTCAGGACAAACAAA 60.462 50.000 4.92 0.00 34.92 2.83
261 262 0.316689 CCGCGTCAGGACAAACAAAC 60.317 55.000 4.92 0.00 0.00 2.93
262 263 0.316689 CGCGTCAGGACAAACAAACC 60.317 55.000 0.00 0.00 0.00 3.27
263 264 0.736053 GCGTCAGGACAAACAAACCA 59.264 50.000 0.00 0.00 0.00 3.67
264 265 1.268539 GCGTCAGGACAAACAAACCAG 60.269 52.381 0.00 0.00 0.00 4.00
265 266 1.268539 CGTCAGGACAAACAAACCAGC 60.269 52.381 0.00 0.00 0.00 4.85
266 267 1.748493 GTCAGGACAAACAAACCAGCA 59.252 47.619 0.00 0.00 0.00 4.41
267 268 1.748493 TCAGGACAAACAAACCAGCAC 59.252 47.619 0.00 0.00 0.00 4.40
268 269 1.111277 AGGACAAACAAACCAGCACC 58.889 50.000 0.00 0.00 0.00 5.01
269 270 0.820871 GGACAAACAAACCAGCACCA 59.179 50.000 0.00 0.00 0.00 4.17
270 271 1.470805 GGACAAACAAACCAGCACCAC 60.471 52.381 0.00 0.00 0.00 4.16
271 272 1.203523 GACAAACAAACCAGCACCACA 59.796 47.619 0.00 0.00 0.00 4.17
272 273 1.067213 ACAAACAAACCAGCACCACAC 60.067 47.619 0.00 0.00 0.00 3.82
273 274 0.534873 AAACAAACCAGCACCACACC 59.465 50.000 0.00 0.00 0.00 4.16
274 275 1.662438 AACAAACCAGCACCACACCG 61.662 55.000 0.00 0.00 0.00 4.94
275 276 2.118404 CAAACCAGCACCACACCGT 61.118 57.895 0.00 0.00 0.00 4.83
276 277 0.816018 CAAACCAGCACCACACCGTA 60.816 55.000 0.00 0.00 0.00 4.02
277 278 0.534203 AAACCAGCACCACACCGTAG 60.534 55.000 0.00 0.00 0.00 3.51
278 279 2.742372 CCAGCACCACACCGTAGC 60.742 66.667 0.00 0.00 0.00 3.58
279 280 3.112075 CAGCACCACACCGTAGCG 61.112 66.667 0.00 0.00 0.00 4.26
280 281 3.612681 AGCACCACACCGTAGCGT 61.613 61.111 0.00 0.00 0.00 5.07
281 282 3.411351 GCACCACACCGTAGCGTG 61.411 66.667 0.00 0.00 39.75 5.34
282 283 3.411351 CACCACACCGTAGCGTGC 61.411 66.667 0.00 0.00 37.25 5.34
283 284 3.612681 ACCACACCGTAGCGTGCT 61.613 61.111 0.00 0.00 37.25 4.40
284 285 3.112075 CCACACCGTAGCGTGCTG 61.112 66.667 4.25 0.00 37.25 4.41
285 286 3.112075 CACACCGTAGCGTGCTGG 61.112 66.667 4.25 0.30 37.25 4.85
286 287 3.299977 ACACCGTAGCGTGCTGGA 61.300 61.111 4.25 0.00 37.25 3.86
287 288 2.809601 CACCGTAGCGTGCTGGAC 60.810 66.667 4.25 0.00 0.00 4.02
288 289 3.299977 ACCGTAGCGTGCTGGACA 61.300 61.111 4.25 0.00 0.00 4.02
289 290 2.048597 CCGTAGCGTGCTGGACAA 60.049 61.111 4.25 0.00 0.00 3.18
290 291 2.380410 CCGTAGCGTGCTGGACAAC 61.380 63.158 4.25 0.00 0.00 3.32
291 292 1.372997 CGTAGCGTGCTGGACAACT 60.373 57.895 4.25 0.00 0.00 3.16
292 293 0.109458 CGTAGCGTGCTGGACAACTA 60.109 55.000 4.25 0.00 0.00 2.24
293 294 1.347320 GTAGCGTGCTGGACAACTAC 58.653 55.000 4.25 11.72 34.71 2.73
294 295 0.109458 TAGCGTGCTGGACAACTACG 60.109 55.000 4.25 0.00 37.77 3.51
295 296 2.380410 GCGTGCTGGACAACTACGG 61.380 63.158 0.00 0.00 35.49 4.02
296 297 1.006571 CGTGCTGGACAACTACGGT 60.007 57.895 0.00 0.00 0.00 4.83
297 298 1.282248 CGTGCTGGACAACTACGGTG 61.282 60.000 0.00 0.00 0.00 4.94
298 299 0.032952 GTGCTGGACAACTACGGTGA 59.967 55.000 0.00 0.00 0.00 4.02
299 300 0.317160 TGCTGGACAACTACGGTGAG 59.683 55.000 0.00 0.00 0.00 3.51
300 301 0.601558 GCTGGACAACTACGGTGAGA 59.398 55.000 0.00 0.00 0.00 3.27
301 302 1.669211 GCTGGACAACTACGGTGAGAC 60.669 57.143 0.00 0.00 0.00 3.36
302 303 0.963962 TGGACAACTACGGTGAGACC 59.036 55.000 0.00 0.00 34.05 3.85
311 312 4.913126 GGTGAGACCGTAGCCAAG 57.087 61.111 0.00 0.00 0.00 3.61
312 313 2.273908 GGTGAGACCGTAGCCAAGA 58.726 57.895 0.00 0.00 0.00 3.02
313 314 0.824759 GGTGAGACCGTAGCCAAGAT 59.175 55.000 0.00 0.00 0.00 2.40
314 315 1.202428 GGTGAGACCGTAGCCAAGATC 60.202 57.143 0.00 0.00 0.00 2.75
315 316 1.476891 GTGAGACCGTAGCCAAGATCA 59.523 52.381 0.00 0.00 0.00 2.92
316 317 1.476891 TGAGACCGTAGCCAAGATCAC 59.523 52.381 0.00 0.00 0.00 3.06
317 318 0.824759 AGACCGTAGCCAAGATCACC 59.175 55.000 0.00 0.00 0.00 4.02
318 319 0.535335 GACCGTAGCCAAGATCACCA 59.465 55.000 0.00 0.00 0.00 4.17
319 320 0.249398 ACCGTAGCCAAGATCACCAC 59.751 55.000 0.00 0.00 0.00 4.16
320 321 0.462047 CCGTAGCCAAGATCACCACC 60.462 60.000 0.00 0.00 0.00 4.61
321 322 0.462047 CGTAGCCAAGATCACCACCC 60.462 60.000 0.00 0.00 0.00 4.61
322 323 0.618458 GTAGCCAAGATCACCACCCA 59.382 55.000 0.00 0.00 0.00 4.51
323 324 1.004277 GTAGCCAAGATCACCACCCAA 59.996 52.381 0.00 0.00 0.00 4.12
324 325 0.706433 AGCCAAGATCACCACCCAAT 59.294 50.000 0.00 0.00 0.00 3.16
325 326 1.106285 GCCAAGATCACCACCCAATC 58.894 55.000 0.00 0.00 0.00 2.67
326 327 1.341383 GCCAAGATCACCACCCAATCT 60.341 52.381 0.00 0.00 0.00 2.40
327 328 2.092429 GCCAAGATCACCACCCAATCTA 60.092 50.000 0.00 0.00 0.00 1.98
328 329 3.813443 CCAAGATCACCACCCAATCTAG 58.187 50.000 0.00 0.00 0.00 2.43
329 330 3.200825 CCAAGATCACCACCCAATCTAGT 59.799 47.826 0.00 0.00 0.00 2.57
330 331 4.324563 CCAAGATCACCACCCAATCTAGTT 60.325 45.833 0.00 0.00 0.00 2.24
331 332 5.104527 CCAAGATCACCACCCAATCTAGTTA 60.105 44.000 0.00 0.00 0.00 2.24
332 333 5.615925 AGATCACCACCCAATCTAGTTAC 57.384 43.478 0.00 0.00 0.00 2.50
333 334 4.409247 AGATCACCACCCAATCTAGTTACC 59.591 45.833 0.00 0.00 0.00 2.85
334 335 3.522759 TCACCACCCAATCTAGTTACCA 58.477 45.455 0.00 0.00 0.00 3.25
335 336 3.262405 TCACCACCCAATCTAGTTACCAC 59.738 47.826 0.00 0.00 0.00 4.16
336 337 3.008594 CACCACCCAATCTAGTTACCACA 59.991 47.826 0.00 0.00 0.00 4.17
337 338 3.008704 ACCACCCAATCTAGTTACCACAC 59.991 47.826 0.00 0.00 0.00 3.82
338 339 3.008594 CCACCCAATCTAGTTACCACACA 59.991 47.826 0.00 0.00 0.00 3.72
339 340 4.324254 CCACCCAATCTAGTTACCACACAT 60.324 45.833 0.00 0.00 0.00 3.21
340 341 4.635765 CACCCAATCTAGTTACCACACATG 59.364 45.833 0.00 0.00 0.00 3.21
341 342 3.627577 CCCAATCTAGTTACCACACATGC 59.372 47.826 0.00 0.00 0.00 4.06
342 343 3.627577 CCAATCTAGTTACCACACATGCC 59.372 47.826 0.00 0.00 0.00 4.40
343 344 4.517285 CAATCTAGTTACCACACATGCCT 58.483 43.478 0.00 0.00 0.00 4.75
344 345 4.844349 ATCTAGTTACCACACATGCCTT 57.156 40.909 0.00 0.00 0.00 4.35
345 346 4.634012 TCTAGTTACCACACATGCCTTT 57.366 40.909 0.00 0.00 0.00 3.11
346 347 4.980573 TCTAGTTACCACACATGCCTTTT 58.019 39.130 0.00 0.00 0.00 2.27
347 348 6.116711 TCTAGTTACCACACATGCCTTTTA 57.883 37.500 0.00 0.00 0.00 1.52
348 349 5.935789 TCTAGTTACCACACATGCCTTTTAC 59.064 40.000 0.00 0.00 0.00 2.01
349 350 4.465886 AGTTACCACACATGCCTTTTACA 58.534 39.130 0.00 0.00 0.00 2.41
350 351 4.277423 AGTTACCACACATGCCTTTTACAC 59.723 41.667 0.00 0.00 0.00 2.90
351 352 2.660572 ACCACACATGCCTTTTACACA 58.339 42.857 0.00 0.00 0.00 3.72
352 353 2.360801 ACCACACATGCCTTTTACACAC 59.639 45.455 0.00 0.00 0.00 3.82
353 354 2.604373 CCACACATGCCTTTTACACACG 60.604 50.000 0.00 0.00 0.00 4.49
354 355 1.001815 ACACATGCCTTTTACACACGC 60.002 47.619 0.00 0.00 0.00 5.34
355 356 1.001924 CACATGCCTTTTACACACGCA 60.002 47.619 0.00 0.00 0.00 5.24
356 357 1.001815 ACATGCCTTTTACACACGCAC 60.002 47.619 0.00 0.00 31.17 5.34
357 358 1.266718 CATGCCTTTTACACACGCACT 59.733 47.619 0.00 0.00 31.17 4.40
358 359 1.384525 TGCCTTTTACACACGCACTT 58.615 45.000 0.00 0.00 0.00 3.16
359 360 1.746220 TGCCTTTTACACACGCACTTT 59.254 42.857 0.00 0.00 0.00 2.66
360 361 2.223386 TGCCTTTTACACACGCACTTTC 60.223 45.455 0.00 0.00 0.00 2.62
361 362 2.857104 GCCTTTTACACACGCACTTTCC 60.857 50.000 0.00 0.00 0.00 3.13
362 363 2.356382 CCTTTTACACACGCACTTTCCA 59.644 45.455 0.00 0.00 0.00 3.53
363 364 3.004315 CCTTTTACACACGCACTTTCCAT 59.996 43.478 0.00 0.00 0.00 3.41
364 365 3.617540 TTTACACACGCACTTTCCATG 57.382 42.857 0.00 0.00 0.00 3.66
365 366 1.518325 TACACACGCACTTTCCATGG 58.482 50.000 4.97 4.97 0.00 3.66
366 367 0.179032 ACACACGCACTTTCCATGGA 60.179 50.000 11.44 11.44 0.00 3.41
367 368 0.238289 CACACGCACTTTCCATGGAC 59.762 55.000 15.91 0.90 0.00 4.02
368 369 0.108585 ACACGCACTTTCCATGGACT 59.891 50.000 15.91 0.00 0.00 3.85
369 370 1.346395 ACACGCACTTTCCATGGACTA 59.654 47.619 15.91 4.62 0.00 2.59
370 371 1.732259 CACGCACTTTCCATGGACTAC 59.268 52.381 15.91 1.52 0.00 2.73
371 372 1.346395 ACGCACTTTCCATGGACTACA 59.654 47.619 15.91 0.00 0.00 2.74
372 373 2.224426 ACGCACTTTCCATGGACTACAA 60.224 45.455 15.91 5.06 0.00 2.41
373 374 2.416547 CGCACTTTCCATGGACTACAAG 59.583 50.000 15.91 17.50 0.00 3.16
374 375 2.749621 GCACTTTCCATGGACTACAAGG 59.250 50.000 22.21 14.46 39.31 3.61
375 376 2.749621 CACTTTCCATGGACTACAAGGC 59.250 50.000 22.21 0.00 37.85 4.35
376 377 2.290960 ACTTTCCATGGACTACAAGGCC 60.291 50.000 22.21 0.00 46.38 5.19
377 378 0.623723 TTCCATGGACTACAAGGCCC 59.376 55.000 15.91 0.00 45.26 5.80
378 379 0.548926 TCCATGGACTACAAGGCCCA 60.549 55.000 11.44 0.00 45.26 5.36
379 380 0.107017 CCATGGACTACAAGGCCCAG 60.107 60.000 5.56 0.00 45.26 4.45
380 381 0.749454 CATGGACTACAAGGCCCAGC 60.749 60.000 0.00 0.00 45.26 4.85
381 382 1.207488 ATGGACTACAAGGCCCAGCA 61.207 55.000 0.00 0.00 45.26 4.41
382 383 1.078143 GGACTACAAGGCCCAGCAG 60.078 63.158 0.00 0.00 37.46 4.24
383 384 1.553690 GGACTACAAGGCCCAGCAGA 61.554 60.000 0.00 0.00 37.46 4.26
384 385 0.391793 GACTACAAGGCCCAGCAGAC 60.392 60.000 0.00 0.00 0.00 3.51
385 386 1.448540 CTACAAGGCCCAGCAGACG 60.449 63.158 0.00 0.00 0.00 4.18
386 387 1.888436 CTACAAGGCCCAGCAGACGA 61.888 60.000 0.00 0.00 0.00 4.20
387 388 1.888436 TACAAGGCCCAGCAGACGAG 61.888 60.000 0.00 0.00 0.00 4.18
388 389 4.400961 AAGGCCCAGCAGACGAGC 62.401 66.667 0.00 0.00 0.00 5.03
392 393 3.385384 CCCAGCAGACGAGCAGGA 61.385 66.667 10.96 0.00 43.20 3.86
393 394 2.183811 CCAGCAGACGAGCAGGAG 59.816 66.667 5.14 0.00 43.20 3.69
394 395 2.346541 CCAGCAGACGAGCAGGAGA 61.347 63.158 5.14 0.00 43.20 3.71
395 396 1.588597 CAGCAGACGAGCAGGAGAA 59.411 57.895 0.00 0.00 36.85 2.87
396 397 0.458197 CAGCAGACGAGCAGGAGAAG 60.458 60.000 0.00 0.00 36.85 2.85
397 398 0.610509 AGCAGACGAGCAGGAGAAGA 60.611 55.000 0.00 0.00 36.85 2.87
398 399 0.244994 GCAGACGAGCAGGAGAAGAA 59.755 55.000 0.00 0.00 0.00 2.52
399 400 1.989430 CAGACGAGCAGGAGAAGAAC 58.011 55.000 0.00 0.00 0.00 3.01
400 401 1.270826 CAGACGAGCAGGAGAAGAACA 59.729 52.381 0.00 0.00 0.00 3.18
401 402 1.543802 AGACGAGCAGGAGAAGAACAG 59.456 52.381 0.00 0.00 0.00 3.16
402 403 0.037790 ACGAGCAGGAGAAGAACAGC 60.038 55.000 0.00 0.00 0.00 4.40
403 404 0.037882 CGAGCAGGAGAAGAACAGCA 60.038 55.000 0.00 0.00 0.00 4.41
404 405 1.724429 GAGCAGGAGAAGAACAGCAG 58.276 55.000 0.00 0.00 0.00 4.24
405 406 1.274728 GAGCAGGAGAAGAACAGCAGA 59.725 52.381 0.00 0.00 0.00 4.26
406 407 1.001860 AGCAGGAGAAGAACAGCAGAC 59.998 52.381 0.00 0.00 0.00 3.51
407 408 1.707632 CAGGAGAAGAACAGCAGACG 58.292 55.000 0.00 0.00 0.00 4.18
408 409 1.270826 CAGGAGAAGAACAGCAGACGA 59.729 52.381 0.00 0.00 0.00 4.20
409 410 1.271102 AGGAGAAGAACAGCAGACGAC 59.729 52.381 0.00 0.00 0.00 4.34
410 411 1.332178 GAGAAGAACAGCAGACGACG 58.668 55.000 0.00 0.00 0.00 5.12
411 412 0.664767 AGAAGAACAGCAGACGACGC 60.665 55.000 0.00 0.00 0.00 5.19
412 413 1.618640 GAAGAACAGCAGACGACGCC 61.619 60.000 0.00 0.00 0.00 5.68
413 414 2.049063 GAACAGCAGACGACGCCT 60.049 61.111 0.00 0.00 0.00 5.52
414 415 1.211969 GAACAGCAGACGACGCCTA 59.788 57.895 0.00 0.00 0.00 3.93
415 416 1.071567 GAACAGCAGACGACGCCTAC 61.072 60.000 0.00 0.00 0.00 3.18
416 417 1.802337 AACAGCAGACGACGCCTACA 61.802 55.000 0.00 0.00 0.00 2.74
417 418 1.801913 CAGCAGACGACGCCTACAC 60.802 63.158 0.00 0.00 0.00 2.90
418 419 2.506438 GCAGACGACGCCTACACC 60.506 66.667 0.00 0.00 0.00 4.16
419 420 2.959372 CAGACGACGCCTACACCA 59.041 61.111 0.00 0.00 0.00 4.17
420 421 1.154016 CAGACGACGCCTACACCAG 60.154 63.158 0.00 0.00 0.00 4.00
421 422 2.506438 GACGACGCCTACACCAGC 60.506 66.667 0.00 0.00 0.00 4.85
427 428 3.755628 GCCTACACCAGCGACGGA 61.756 66.667 0.00 0.00 0.00 4.69
428 429 3.077519 GCCTACACCAGCGACGGAT 62.078 63.158 0.00 0.00 0.00 4.18
429 430 1.515954 CCTACACCAGCGACGGATT 59.484 57.895 0.00 0.00 0.00 3.01
430 431 0.108329 CCTACACCAGCGACGGATTT 60.108 55.000 0.00 0.00 0.00 2.17
431 432 0.999406 CTACACCAGCGACGGATTTG 59.001 55.000 0.00 0.00 0.00 2.32
432 433 0.319083 TACACCAGCGACGGATTTGT 59.681 50.000 0.00 0.00 0.00 2.83
433 434 0.534203 ACACCAGCGACGGATTTGTT 60.534 50.000 0.00 0.00 0.00 2.83
434 435 0.110238 CACCAGCGACGGATTTGTTG 60.110 55.000 0.00 0.00 0.00 3.33
435 436 0.250124 ACCAGCGACGGATTTGTTGA 60.250 50.000 0.00 0.00 0.00 3.18
436 437 0.165944 CCAGCGACGGATTTGTTGAC 59.834 55.000 0.00 0.00 0.00 3.18
437 438 0.179250 CAGCGACGGATTTGTTGACG 60.179 55.000 0.00 0.00 0.00 4.35
438 439 1.509162 GCGACGGATTTGTTGACGC 60.509 57.895 0.00 0.00 39.25 5.19
439 440 1.856688 CGACGGATTTGTTGACGCA 59.143 52.632 0.00 0.00 0.00 5.24
440 441 0.450482 CGACGGATTTGTTGACGCAC 60.450 55.000 0.00 0.00 0.00 5.34
441 442 0.865769 GACGGATTTGTTGACGCACT 59.134 50.000 0.00 0.00 0.00 4.40
442 443 1.263217 GACGGATTTGTTGACGCACTT 59.737 47.619 0.00 0.00 0.00 3.16
443 444 1.673920 ACGGATTTGTTGACGCACTTT 59.326 42.857 0.00 0.00 0.00 2.66
444 445 2.286772 ACGGATTTGTTGACGCACTTTC 60.287 45.455 0.00 0.00 0.00 2.62
445 446 2.661594 GGATTTGTTGACGCACTTTCC 58.338 47.619 0.00 0.00 0.00 3.13
446 447 2.034053 GGATTTGTTGACGCACTTTCCA 59.966 45.455 0.00 0.00 0.00 3.53
447 448 3.305335 GGATTTGTTGACGCACTTTCCAT 60.305 43.478 0.00 0.00 0.00 3.41
448 449 2.772568 TTGTTGACGCACTTTCCATG 57.227 45.000 0.00 0.00 0.00 3.66
449 450 0.950836 TGTTGACGCACTTTCCATGG 59.049 50.000 4.97 4.97 0.00 3.66
450 451 1.234821 GTTGACGCACTTTCCATGGA 58.765 50.000 11.44 11.44 0.00 3.41
451 452 1.069227 GTTGACGCACTTTCCATGGAC 60.069 52.381 15.91 0.90 0.00 4.02
452 453 0.396435 TGACGCACTTTCCATGGACT 59.604 50.000 15.91 0.00 0.00 3.85
453 454 1.202758 TGACGCACTTTCCATGGACTT 60.203 47.619 15.91 0.00 0.00 3.01
454 455 1.197721 GACGCACTTTCCATGGACTTG 59.802 52.381 15.91 12.73 0.00 3.16
462 463 0.681887 TCCATGGACTTGCTGGCATG 60.682 55.000 11.44 6.87 0.00 4.06
469 470 1.610522 GACTTGCTGGCATGTTCTTGT 59.389 47.619 13.77 0.00 35.00 3.16
533 567 4.603985 CGTATATGAAGTTGGCACGTAGA 58.396 43.478 0.00 0.00 0.00 2.59
549 583 8.740906 TGGCACGTAGAATTTTAATTTCCAATA 58.259 29.630 0.00 0.00 0.00 1.90
550 584 9.575783 GGCACGTAGAATTTTAATTTCCAATAA 57.424 29.630 0.00 0.00 0.00 1.40
592 627 6.901300 GGGGGAAAAAGAATGTCTAGTATCT 58.099 40.000 0.00 0.00 0.00 1.98
594 629 6.768381 GGGGAAAAAGAATGTCTAGTATCTGG 59.232 42.308 0.00 0.00 0.00 3.86
596 631 8.214364 GGGAAAAAGAATGTCTAGTATCTGGAT 58.786 37.037 0.00 0.00 0.00 3.41
608 643 0.816825 ATCTGGATGATGCACACGGC 60.817 55.000 0.00 0.00 45.13 5.68
611 646 2.764314 GGATGATGCACACGGCCAC 61.764 63.158 2.24 0.00 43.89 5.01
642 677 4.163552 ACCAATATATGTACGCACGATCG 58.836 43.478 14.88 14.88 0.00 3.69
670 705 0.392193 CTCGCTTCATCTTGGGCTGT 60.392 55.000 0.00 0.00 0.00 4.40
739 2834 6.308766 AGTTATTTTGCTAACCTACGTACGTG 59.691 38.462 30.25 17.12 33.02 4.49
741 2836 0.880441 TGCTAACCTACGTACGTGCA 59.120 50.000 30.25 24.92 0.00 4.57
742 2837 1.269174 TGCTAACCTACGTACGTGCAA 59.731 47.619 30.25 10.25 0.00 4.08
743 2838 1.650645 GCTAACCTACGTACGTGCAAC 59.349 52.381 30.25 9.61 0.00 4.17
745 2840 0.664166 AACCTACGTACGTGCAACCG 60.664 55.000 30.25 12.74 0.00 4.44
747 2842 0.179156 CCTACGTACGTGCAACCGAT 60.179 55.000 30.25 2.64 0.00 4.18
748 2843 1.621107 CTACGTACGTGCAACCGATT 58.379 50.000 30.25 1.85 0.00 3.34
749 2844 1.580704 CTACGTACGTGCAACCGATTC 59.419 52.381 30.25 0.00 0.00 2.52
750 2845 0.038892 ACGTACGTGCAACCGATTCT 60.039 50.000 22.14 0.00 0.00 2.40
751 2846 1.199789 ACGTACGTGCAACCGATTCTA 59.800 47.619 22.14 0.00 0.00 2.10
752 2847 2.252747 CGTACGTGCAACCGATTCTAA 58.747 47.619 7.22 0.00 0.00 2.10
753 2848 2.662637 CGTACGTGCAACCGATTCTAAA 59.337 45.455 7.22 0.00 0.00 1.85
754 2849 3.121611 CGTACGTGCAACCGATTCTAAAA 59.878 43.478 7.22 0.00 0.00 1.52
755 2850 4.376210 CGTACGTGCAACCGATTCTAAAAA 60.376 41.667 7.22 0.00 0.00 1.94
811 2906 2.277692 CAAGACGCGCATGCATGG 60.278 61.111 27.34 17.93 42.97 3.66
843 2942 4.141251 ACAGATATACCGGCCCATTTTCTT 60.141 41.667 0.00 0.00 0.00 2.52
901 3002 3.371097 TTCGAGCTCGCACCATCCC 62.371 63.158 30.97 0.00 39.60 3.85
995 3105 4.602006 CGAAAACTAGAGCTGATCATCGA 58.398 43.478 0.00 0.00 0.00 3.59
1143 3253 2.615747 GCAAAGGAACTACCACTCCTCC 60.616 54.545 0.00 0.00 41.40 4.30
1286 3399 2.606725 CGATCTGCCAATCAGTCTTGAC 59.393 50.000 0.00 0.00 43.32 3.18
1290 3403 0.321653 GCCAATCAGTCTTGACCGGT 60.322 55.000 6.92 6.92 35.83 5.28
1303 3416 0.958822 GACCGGTTTTGGTGCTTGAT 59.041 50.000 9.42 0.00 44.01 2.57
1344 3459 2.066262 ACTTTCACGTGTGCGATTAGG 58.934 47.619 16.51 0.07 42.00 2.69
1364 3479 3.446873 AGGTAGCATGATCGATGATCTCC 59.553 47.826 0.54 0.00 39.56 3.71
1370 3485 4.439153 GCATGATCGATGATCTCCTCTCTC 60.439 50.000 0.54 0.00 39.56 3.20
1383 3498 7.448161 TGATCTCCTCTCTCTGATATTCACTTC 59.552 40.741 0.00 0.00 0.00 3.01
1384 3499 5.762711 TCTCCTCTCTCTGATATTCACTTCG 59.237 44.000 0.00 0.00 0.00 3.79
1386 3501 5.888724 TCCTCTCTCTGATATTCACTTCGTT 59.111 40.000 0.00 0.00 0.00 3.85
1387 3502 6.038825 TCCTCTCTCTGATATTCACTTCGTTC 59.961 42.308 0.00 0.00 0.00 3.95
1388 3503 6.183360 CCTCTCTCTGATATTCACTTCGTTCA 60.183 42.308 0.00 0.00 0.00 3.18
1389 3504 7.340122 TCTCTCTGATATTCACTTCGTTCAT 57.660 36.000 0.00 0.00 0.00 2.57
1390 3505 7.199078 TCTCTCTGATATTCACTTCGTTCATG 58.801 38.462 0.00 0.00 0.00 3.07
1391 3506 5.750547 TCTCTGATATTCACTTCGTTCATGC 59.249 40.000 0.00 0.00 0.00 4.06
1392 3507 5.418676 TCTGATATTCACTTCGTTCATGCA 58.581 37.500 0.00 0.00 0.00 3.96
1411 3527 0.534412 ACCTCTTGCTCCGATCTGTG 59.466 55.000 0.00 0.00 0.00 3.66
1412 3528 0.179089 CCTCTTGCTCCGATCTGTGG 60.179 60.000 0.00 0.00 0.00 4.17
1446 3568 1.027357 CAGTTTGCTGCTTGACTGGT 58.973 50.000 17.02 0.00 36.68 4.00
1470 3592 4.946445 AGCTTAATCTACTTACTTCCGCC 58.054 43.478 0.00 0.00 0.00 6.13
1480 3602 4.442706 ACTTACTTCCGCCTGTAATGATG 58.557 43.478 0.00 0.00 0.00 3.07
1481 3603 2.332063 ACTTCCGCCTGTAATGATGG 57.668 50.000 0.00 0.00 0.00 3.51
1512 3722 8.703378 TTAGCATGATCTCTTCTCTCTGATAA 57.297 34.615 0.00 0.00 0.00 1.75
1519 3729 9.874195 TGATCTCTTCTCTCTGATAATTCCTTA 57.126 33.333 0.00 0.00 0.00 2.69
1545 3854 5.038247 TGATCATATGAATGTTGCATCGC 57.962 39.130 9.99 0.00 34.50 4.58
1555 3864 1.999735 TGTTGCATCGCTTACTACTGC 59.000 47.619 0.00 0.00 0.00 4.40
1557 3866 1.926561 TGCATCGCTTACTACTGCAG 58.073 50.000 13.48 13.48 37.88 4.41
1571 3880 3.114668 ACTGCAGCATCTGATCTGATC 57.885 47.619 15.27 10.72 32.44 2.92
1577 3886 4.153296 GCAGCATCTGATCTGATCTGATTG 59.847 45.833 27.38 24.53 42.88 2.67
1651 3960 6.509418 TTACATGACCTGATTGGCTTTTAC 57.491 37.500 0.00 0.00 40.22 2.01
1676 3985 8.030106 ACTTTGAGCAACTTAACTAGCTACTAG 58.970 37.037 0.08 0.08 39.72 2.57
1678 3987 8.571461 TTGAGCAACTTAACTAGCTACTAGTA 57.429 34.615 7.66 1.89 45.28 1.82
1679 3988 8.571461 TGAGCAACTTAACTAGCTACTAGTAA 57.429 34.615 7.66 3.19 45.28 2.24
1680 3989 8.457261 TGAGCAACTTAACTAGCTACTAGTAAC 58.543 37.037 7.66 0.00 45.28 2.50
1681 3990 7.470900 AGCAACTTAACTAGCTACTAGTAACG 58.529 38.462 7.66 0.00 45.28 3.18
1682 3991 7.120432 AGCAACTTAACTAGCTACTAGTAACGT 59.880 37.037 7.66 3.17 45.28 3.99
1683 3992 7.427895 GCAACTTAACTAGCTACTAGTAACGTC 59.572 40.741 7.66 0.00 45.28 4.34
1684 3993 8.663911 CAACTTAACTAGCTACTAGTAACGTCT 58.336 37.037 7.66 2.16 45.28 4.18
1685 3994 9.877178 AACTTAACTAGCTACTAGTAACGTCTA 57.123 33.333 7.66 3.13 45.28 2.59
1686 3995 9.877178 ACTTAACTAGCTACTAGTAACGTCTAA 57.123 33.333 7.66 2.09 45.28 2.10
1689 3998 8.954950 AACTAGCTACTAGTAACGTCTAATCA 57.045 34.615 7.66 0.00 45.28 2.57
1696 4005 9.478768 CTACTAGTAACGTCTAATCAGATCTGA 57.521 37.037 27.03 27.03 44.59 3.27
1710 4019 2.170187 AGATCTGATCTGGTCACCAAGC 59.830 50.000 18.93 0.00 38.44 4.01
1748 4059 9.173021 TCAATATTAATTCCACTGAAACATCGT 57.827 29.630 0.00 0.00 33.32 3.73
1750 4061 5.524511 TTAATTCCACTGAAACATCGTCG 57.475 39.130 0.00 0.00 33.32 5.12
1751 4062 2.519377 TTCCACTGAAACATCGTCGT 57.481 45.000 0.00 0.00 0.00 4.34
1752 4063 3.646611 TTCCACTGAAACATCGTCGTA 57.353 42.857 0.00 0.00 0.00 3.43
1753 4064 2.937591 TCCACTGAAACATCGTCGTAC 58.062 47.619 0.00 0.00 0.00 3.67
1756 4067 3.850273 CCACTGAAACATCGTCGTACTAC 59.150 47.826 0.00 0.00 0.00 2.73
1760 4071 5.063180 TGAAACATCGTCGTACTACCATT 57.937 39.130 0.00 0.00 0.00 3.16
1813 4125 5.640732 ACGCTGGATTAATTGTGATTTGTC 58.359 37.500 0.00 0.00 0.00 3.18
1821 4133 9.450807 GGATTAATTGTGATTTGTCCTAATTCG 57.549 33.333 0.00 0.00 30.73 3.34
1868 4184 1.499502 GACGAAGAAGCAGCTTGCC 59.500 57.895 13.91 0.00 46.52 4.52
2114 4430 2.925170 AGGGAGCACAAGACGGCT 60.925 61.111 0.00 0.00 44.48 5.52
2198 4514 2.073816 CACAAAACCTTCTCCGCGTAT 58.926 47.619 4.92 0.00 0.00 3.06
2229 4548 6.492007 CAATCATGCTACATCCTTACCATC 57.508 41.667 0.00 0.00 0.00 3.51
2377 4704 2.702478 CTCCATGGATCTAGTCAAGGCA 59.298 50.000 16.63 0.00 0.00 4.75
2390 4717 2.140792 AAGGCACAGGTCCAGTCGT 61.141 57.895 0.00 0.00 0.00 4.34
2398 4725 1.478510 CAGGTCCAGTCGTCTAATGCT 59.521 52.381 0.00 0.00 0.00 3.79
2402 4729 2.426024 GTCCAGTCGTCTAATGCTACCA 59.574 50.000 0.00 0.00 0.00 3.25
2468 4808 7.120138 GGCTAGTTTTATAACAGCACTTGGTTA 59.880 37.037 16.12 0.00 38.76 2.85
2477 4817 5.789643 ACAGCACTTGGTTAATTTGTCAT 57.210 34.783 0.00 0.00 0.00 3.06
2478 4818 5.531634 ACAGCACTTGGTTAATTTGTCATG 58.468 37.500 0.00 0.00 0.00 3.07
2479 4819 4.386652 CAGCACTTGGTTAATTTGTCATGC 59.613 41.667 0.00 0.00 0.00 4.06
2480 4820 4.039004 AGCACTTGGTTAATTTGTCATGCA 59.961 37.500 0.00 0.00 0.00 3.96
2506 4846 2.063979 ATGGCCGATCGACCTCCAA 61.064 57.895 21.53 0.95 0.00 3.53
2508 4848 2.586357 GCCGATCGACCTCCAAGC 60.586 66.667 18.66 4.69 0.00 4.01
2511 4851 1.084370 CCGATCGACCTCCAAGCAAC 61.084 60.000 18.66 0.00 0.00 4.17
2515 4855 2.961526 TCGACCTCCAAGCAACTATC 57.038 50.000 0.00 0.00 0.00 2.08
2516 4856 2.457598 TCGACCTCCAAGCAACTATCT 58.542 47.619 0.00 0.00 0.00 1.98
2518 4858 2.796383 CGACCTCCAAGCAACTATCTCG 60.796 54.545 0.00 0.00 0.00 4.04
2530 4870 4.444056 GCAACTATCTCGCTCTCTTCAATC 59.556 45.833 0.00 0.00 0.00 2.67
2585 4925 3.918566 TGGATTTTGATGATGCAGGGAT 58.081 40.909 0.00 0.00 0.00 3.85
2597 4937 2.110967 CAGGGATGTGAAGCGGCTG 61.111 63.158 1.81 0.00 0.00 4.85
2651 4991 1.453197 GATGGCCGGGGAAATCGTT 60.453 57.895 2.18 0.00 0.00 3.85
2727 5108 5.970317 ACATTGCACTGAGAATTCATTGA 57.030 34.783 11.48 0.00 36.41 2.57
2856 5237 2.580601 CGAAAGGGGTGGAGTCGGT 61.581 63.158 0.00 0.00 0.00 4.69
3104 5493 8.177663 AGTTTTGCGATGCTATATATATGTTGC 58.822 33.333 5.44 8.56 0.00 4.17
3227 5619 4.657504 TGCTGAATGGTCTGATATCTCCTT 59.342 41.667 3.98 0.49 0.00 3.36
3228 5620 5.131642 TGCTGAATGGTCTGATATCTCCTTT 59.868 40.000 3.98 8.22 0.00 3.11
3233 5625 8.992349 TGAATGGTCTGATATCTCCTTTTCTTA 58.008 33.333 3.98 0.00 0.00 2.10
3234 5629 9.267084 GAATGGTCTGATATCTCCTTTTCTTAC 57.733 37.037 3.98 0.00 0.00 2.34
3262 5657 0.618458 ACCGTATGCATGTTCAGGGT 59.382 50.000 10.16 7.62 0.00 4.34
3263 5658 1.299541 CCGTATGCATGTTCAGGGTC 58.700 55.000 10.16 0.00 0.00 4.46
3264 5659 1.134401 CCGTATGCATGTTCAGGGTCT 60.134 52.381 10.16 0.00 0.00 3.85
3265 5660 2.632377 CGTATGCATGTTCAGGGTCTT 58.368 47.619 10.16 0.00 0.00 3.01
3267 5662 3.555956 CGTATGCATGTTCAGGGTCTTAC 59.444 47.826 10.16 0.00 0.00 2.34
3280 5686 1.571919 GTCTTACCTGCATGCCTACG 58.428 55.000 16.68 1.89 0.00 3.51
3291 5697 0.460311 ATGCCTACGTACAGACCAGC 59.540 55.000 0.00 0.00 0.00 4.85
3310 5716 6.057533 ACCAGCGTATGCATGCATATATAAT 58.942 36.000 36.01 20.64 46.23 1.28
3311 5717 6.017687 ACCAGCGTATGCATGCATATATAATG 60.018 38.462 36.01 27.60 46.23 1.90
3312 5718 5.849604 CAGCGTATGCATGCATATATAATGC 59.150 40.000 36.01 30.81 46.23 3.56
3313 5719 5.761726 AGCGTATGCATGCATATATAATGCT 59.238 36.000 36.01 32.18 45.51 3.79
3314 5720 6.073385 AGCGTATGCATGCATATATAATGCTC 60.073 38.462 36.01 21.47 45.51 4.26
3358 5835 4.519906 TCCAAATAACCTCCTCAATCCC 57.480 45.455 0.00 0.00 0.00 3.85
3380 5857 1.009829 CCCATCTTCTGCGTGCTAAC 58.990 55.000 0.00 0.00 0.00 2.34
3428 5905 1.783284 TCAGAACATGTCGTGAGCAC 58.217 50.000 0.00 0.00 0.00 4.40
3439 5916 4.966787 TGAGCACGGGGGTTTGGC 62.967 66.667 0.00 0.00 0.00 4.52
3453 5930 3.760151 GGGTTTGGCCGACTATTAAACTT 59.240 43.478 11.15 0.00 38.44 2.66
3454 5931 4.142534 GGGTTTGGCCGACTATTAAACTTC 60.143 45.833 11.15 3.05 38.44 3.01
3455 5932 4.698780 GGTTTGGCCGACTATTAAACTTCT 59.301 41.667 11.15 0.00 33.15 2.85
3456 5933 5.163784 GGTTTGGCCGACTATTAAACTTCTC 60.164 44.000 11.15 0.00 33.15 2.87
3457 5934 5.416271 TTGGCCGACTATTAAACTTCTCT 57.584 39.130 0.00 0.00 0.00 3.10
3458 5935 6.534475 TTGGCCGACTATTAAACTTCTCTA 57.466 37.500 0.00 0.00 0.00 2.43
3459 5936 5.899299 TGGCCGACTATTAAACTTCTCTAC 58.101 41.667 0.00 0.00 0.00 2.59
3460 5937 5.655532 TGGCCGACTATTAAACTTCTCTACT 59.344 40.000 0.00 0.00 0.00 2.57
3461 5938 5.978322 GGCCGACTATTAAACTTCTCTACTG 59.022 44.000 0.00 0.00 0.00 2.74
3462 5939 5.978322 GCCGACTATTAAACTTCTCTACTGG 59.022 44.000 0.00 0.00 0.00 4.00
3471 5948 8.828688 TTAAACTTCTCTACTGGCTAAGTTTC 57.171 34.615 13.08 0.00 43.33 2.78
3518 5995 6.886307 TGCAAGTTGAAAGAAGTTTGTTTTG 58.114 32.000 7.16 0.00 0.00 2.44
3523 6000 8.098220 AGTTGAAAGAAGTTTGTTTTGCATTT 57.902 26.923 0.00 0.00 0.00 2.32
3534 6011 0.302890 TTTGCATTTTGTTTGCGCGG 59.697 45.000 8.83 0.00 43.10 6.46
3545 6022 0.992802 TTTGCGCGGTTGTGTTTTTC 59.007 45.000 8.83 0.00 0.00 2.29
3621 6104 5.163513 CAACTAAATCACCATGCTTCCAAC 58.836 41.667 0.00 0.00 0.00 3.77
3629 6112 1.068333 CCATGCTTCCAACTTGTTCCG 60.068 52.381 0.00 0.00 0.00 4.30
3707 6220 6.072563 TCCATGTTCCGTTGCATATCATAATG 60.073 38.462 0.00 0.00 0.00 1.90
3713 6226 5.067023 TCCGTTGCATATCATAATGTTGCAA 59.933 36.000 0.00 0.00 38.28 4.08
3719 6232 6.697892 TGCATATCATAATGTTGCAATGTGTG 59.302 34.615 0.59 0.00 0.00 3.82
3804 6317 7.532682 TTGCAACAAAACTTTGAACTTATCC 57.467 32.000 9.12 0.00 40.55 2.59
3805 6318 6.872920 TGCAACAAAACTTTGAACTTATCCT 58.127 32.000 9.12 0.00 40.55 3.24
3838 6378 4.568152 AGTTTTCACCATGTTTCGGAAG 57.432 40.909 0.00 0.00 0.00 3.46
3889 6429 9.865321 ATATTCAAACATGGTCTCATTTCAAAG 57.135 29.630 0.00 0.00 0.00 2.77
3894 6434 6.566197 ACATGGTCTCATTTCAAAGTTCTC 57.434 37.500 0.00 0.00 0.00 2.87
3895 6435 6.064060 ACATGGTCTCATTTCAAAGTTCTCA 58.936 36.000 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.451900 GGATGTGGTATTTCTGTCGGAAT 58.548 43.478 0.00 0.00 33.53 3.01
3 4 3.677700 CGGATGTGGTATTTCTGTCGGAA 60.678 47.826 0.00 0.00 0.00 4.30
4 5 2.159156 CGGATGTGGTATTTCTGTCGGA 60.159 50.000 0.00 0.00 0.00 4.55
5 6 2.201732 CGGATGTGGTATTTCTGTCGG 58.798 52.381 0.00 0.00 0.00 4.79
6 7 1.593006 GCGGATGTGGTATTTCTGTCG 59.407 52.381 0.00 0.00 0.00 4.35
7 8 2.906354 AGCGGATGTGGTATTTCTGTC 58.094 47.619 0.00 0.00 0.00 3.51
8 9 3.350219 AAGCGGATGTGGTATTTCTGT 57.650 42.857 0.00 0.00 0.00 3.41
9 10 3.689161 TGAAAGCGGATGTGGTATTTCTG 59.311 43.478 0.00 0.00 0.00 3.02
10 11 3.941483 CTGAAAGCGGATGTGGTATTTCT 59.059 43.478 0.00 0.00 0.00 2.52
11 12 4.278678 CTGAAAGCGGATGTGGTATTTC 57.721 45.455 0.00 0.00 0.00 2.17
26 27 0.037303 TCTCCAAGGGCAGCTGAAAG 59.963 55.000 20.43 1.30 0.00 2.62
27 28 0.700564 ATCTCCAAGGGCAGCTGAAA 59.299 50.000 20.43 0.00 0.00 2.69
28 29 0.254178 GATCTCCAAGGGCAGCTGAA 59.746 55.000 20.43 0.00 0.00 3.02
29 30 1.630126 GGATCTCCAAGGGCAGCTGA 61.630 60.000 20.43 0.00 35.64 4.26
30 31 1.153005 GGATCTCCAAGGGCAGCTG 60.153 63.158 10.11 10.11 35.64 4.24
31 32 1.617536 TGGATCTCCAAGGGCAGCT 60.618 57.895 0.00 0.00 44.35 4.24
32 33 3.001514 TGGATCTCCAAGGGCAGC 58.998 61.111 0.00 0.00 44.35 5.25
39 40 4.226846 ATTCAAGAGCTCTTGGATCTCCAA 59.773 41.667 41.75 30.81 46.47 3.53
40 41 3.779183 ATTCAAGAGCTCTTGGATCTCCA 59.221 43.478 41.75 25.89 46.47 3.86
41 42 4.420522 ATTCAAGAGCTCTTGGATCTCC 57.579 45.455 41.75 5.15 46.47 3.71
49 50 2.818432 CCACAGCAATTCAAGAGCTCTT 59.182 45.455 23.49 23.49 36.26 2.85
50 51 2.434428 CCACAGCAATTCAAGAGCTCT 58.566 47.619 11.45 11.45 36.26 4.09
51 52 1.471684 CCCACAGCAATTCAAGAGCTC 59.528 52.381 5.27 5.27 36.26 4.09
52 53 1.542492 CCCACAGCAATTCAAGAGCT 58.458 50.000 0.00 0.00 39.63 4.09
53 54 0.108945 GCCCACAGCAATTCAAGAGC 60.109 55.000 0.00 0.00 42.97 4.09
54 55 0.169672 CGCCCACAGCAATTCAAGAG 59.830 55.000 0.00 0.00 44.04 2.85
55 56 0.250684 TCGCCCACAGCAATTCAAGA 60.251 50.000 0.00 0.00 44.04 3.02
56 57 0.597568 TTCGCCCACAGCAATTCAAG 59.402 50.000 0.00 0.00 44.04 3.02
57 58 1.000385 CTTTCGCCCACAGCAATTCAA 60.000 47.619 0.00 0.00 44.04 2.69
58 59 0.597568 CTTTCGCCCACAGCAATTCA 59.402 50.000 0.00 0.00 44.04 2.57
59 60 0.733909 GCTTTCGCCCACAGCAATTC 60.734 55.000 0.00 0.00 44.04 2.17
60 61 1.290009 GCTTTCGCCCACAGCAATT 59.710 52.632 0.00 0.00 44.04 2.32
61 62 1.252904 ATGCTTTCGCCCACAGCAAT 61.253 50.000 0.00 0.00 46.35 3.56
62 63 1.462731 AATGCTTTCGCCCACAGCAA 61.463 50.000 0.00 0.00 46.35 3.91
64 65 1.153958 GAATGCTTTCGCCCACAGC 60.154 57.895 0.00 0.00 38.52 4.40
65 66 1.243342 TGGAATGCTTTCGCCCACAG 61.243 55.000 6.28 0.00 34.43 3.66
66 67 1.228398 TGGAATGCTTTCGCCCACA 60.228 52.632 6.28 0.00 34.43 4.17
67 68 1.212751 GTGGAATGCTTTCGCCCAC 59.787 57.895 6.28 6.17 38.31 4.61
68 69 2.331893 CGTGGAATGCTTTCGCCCA 61.332 57.895 6.28 0.00 34.43 5.36
69 70 2.485122 CGTGGAATGCTTTCGCCC 59.515 61.111 6.28 0.00 34.43 6.13
70 71 2.485122 CCGTGGAATGCTTTCGCC 59.515 61.111 6.28 0.00 34.43 5.54
71 72 2.202479 GCCGTGGAATGCTTTCGC 60.202 61.111 6.28 1.03 32.28 4.70
72 73 0.171007 ATTGCCGTGGAATGCTTTCG 59.829 50.000 6.28 0.00 32.28 3.46
73 74 2.262211 GAATTGCCGTGGAATGCTTTC 58.738 47.619 3.77 3.77 0.00 2.62
74 75 1.066929 GGAATTGCCGTGGAATGCTTT 60.067 47.619 0.00 0.00 0.00 3.51
75 76 0.532115 GGAATTGCCGTGGAATGCTT 59.468 50.000 0.00 0.00 0.00 3.91
76 77 0.611618 TGGAATTGCCGTGGAATGCT 60.612 50.000 0.00 0.00 40.66 3.79
77 78 0.458370 GTGGAATTGCCGTGGAATGC 60.458 55.000 0.00 0.00 40.66 3.56
78 79 0.179166 CGTGGAATTGCCGTGGAATG 60.179 55.000 0.00 0.00 40.66 2.67
79 80 1.933115 GCGTGGAATTGCCGTGGAAT 61.933 55.000 8.95 0.00 40.66 3.01
80 81 2.622011 GCGTGGAATTGCCGTGGAA 61.622 57.895 8.95 0.00 40.66 3.53
81 82 2.173758 TAGCGTGGAATTGCCGTGGA 62.174 55.000 8.95 0.00 40.66 4.02
82 83 1.302383 TTAGCGTGGAATTGCCGTGG 61.302 55.000 8.95 0.00 40.66 4.94
83 84 0.096976 CTTAGCGTGGAATTGCCGTG 59.903 55.000 8.95 0.00 40.66 4.94
84 85 1.024579 CCTTAGCGTGGAATTGCCGT 61.025 55.000 8.95 1.17 40.66 5.68
85 86 1.024579 ACCTTAGCGTGGAATTGCCG 61.025 55.000 0.00 0.00 40.66 5.69
86 87 1.173913 AACCTTAGCGTGGAATTGCC 58.826 50.000 0.00 0.00 37.10 4.52
87 88 3.242518 GAAAACCTTAGCGTGGAATTGC 58.757 45.455 0.00 0.00 0.00 3.56
88 89 4.497473 TGAAAACCTTAGCGTGGAATTG 57.503 40.909 0.00 0.00 0.00 2.32
89 90 5.469479 CAATGAAAACCTTAGCGTGGAATT 58.531 37.500 0.00 0.00 0.00 2.17
90 91 4.618227 GCAATGAAAACCTTAGCGTGGAAT 60.618 41.667 0.00 0.00 0.00 3.01
91 92 3.305064 GCAATGAAAACCTTAGCGTGGAA 60.305 43.478 0.00 0.00 0.00 3.53
92 93 2.227865 GCAATGAAAACCTTAGCGTGGA 59.772 45.455 0.00 0.00 0.00 4.02
93 94 2.228822 AGCAATGAAAACCTTAGCGTGG 59.771 45.455 0.00 0.00 0.00 4.94
94 95 3.492313 GAGCAATGAAAACCTTAGCGTG 58.508 45.455 0.00 0.00 0.00 5.34
95 96 2.488153 GGAGCAATGAAAACCTTAGCGT 59.512 45.455 0.00 0.00 0.00 5.07
96 97 2.159379 GGGAGCAATGAAAACCTTAGCG 60.159 50.000 0.00 0.00 0.00 4.26
97 98 2.159379 CGGGAGCAATGAAAACCTTAGC 60.159 50.000 0.00 0.00 0.00 3.09
98 99 2.423538 CCGGGAGCAATGAAAACCTTAG 59.576 50.000 0.00 0.00 0.00 2.18
99 100 2.442413 CCGGGAGCAATGAAAACCTTA 58.558 47.619 0.00 0.00 0.00 2.69
100 101 1.256812 CCGGGAGCAATGAAAACCTT 58.743 50.000 0.00 0.00 0.00 3.50
101 102 1.250840 GCCGGGAGCAATGAAAACCT 61.251 55.000 2.18 0.00 42.97 3.50
102 103 1.215382 GCCGGGAGCAATGAAAACC 59.785 57.895 2.18 0.00 42.97 3.27
103 104 1.154035 CGCCGGGAGCAATGAAAAC 60.154 57.895 2.18 0.00 44.04 2.43
104 105 0.679640 ATCGCCGGGAGCAATGAAAA 60.680 50.000 2.18 0.00 44.04 2.29
105 106 1.077787 ATCGCCGGGAGCAATGAAA 60.078 52.632 2.18 0.00 44.04 2.69
106 107 1.523711 GATCGCCGGGAGCAATGAA 60.524 57.895 2.18 0.00 44.04 2.57
107 108 2.108976 GATCGCCGGGAGCAATGA 59.891 61.111 2.18 0.00 44.04 2.57
108 109 2.947938 AAGGATCGCCGGGAGCAATG 62.948 60.000 2.18 0.00 44.04 2.82
109 110 2.666596 GAAGGATCGCCGGGAGCAAT 62.667 60.000 2.18 0.00 44.04 3.56
110 111 3.385749 GAAGGATCGCCGGGAGCAA 62.386 63.158 2.18 0.00 44.04 3.91
111 112 3.849951 GAAGGATCGCCGGGAGCA 61.850 66.667 2.18 0.00 44.04 4.26
112 113 3.798954 CTGAAGGATCGCCGGGAGC 62.799 68.421 2.18 0.92 39.96 4.70
113 114 2.419198 CTGAAGGATCGCCGGGAG 59.581 66.667 2.18 0.00 39.96 4.30
114 115 3.849951 GCTGAAGGATCGCCGGGA 61.850 66.667 2.18 0.00 39.96 5.14
115 116 3.391665 AAGCTGAAGGATCGCCGGG 62.392 63.158 2.18 0.00 39.96 5.73
116 117 1.884926 GAAGCTGAAGGATCGCCGG 60.885 63.158 0.00 0.00 39.96 6.13
117 118 1.884926 GGAAGCTGAAGGATCGCCG 60.885 63.158 0.00 0.00 39.96 6.46
118 119 1.092345 GTGGAAGCTGAAGGATCGCC 61.092 60.000 0.00 0.00 0.00 5.54
119 120 0.107945 AGTGGAAGCTGAAGGATCGC 60.108 55.000 0.00 0.00 0.00 4.58
120 121 1.800655 CGAGTGGAAGCTGAAGGATCG 60.801 57.143 0.00 0.00 0.00 3.69
121 122 1.478510 TCGAGTGGAAGCTGAAGGATC 59.521 52.381 0.00 0.00 0.00 3.36
122 123 1.205893 GTCGAGTGGAAGCTGAAGGAT 59.794 52.381 0.00 0.00 0.00 3.24
123 124 0.603569 GTCGAGTGGAAGCTGAAGGA 59.396 55.000 0.00 0.00 0.00 3.36
124 125 0.318441 TGTCGAGTGGAAGCTGAAGG 59.682 55.000 0.00 0.00 0.00 3.46
125 126 1.998315 CATGTCGAGTGGAAGCTGAAG 59.002 52.381 0.00 0.00 0.00 3.02
126 127 1.941209 GCATGTCGAGTGGAAGCTGAA 60.941 52.381 0.00 0.00 0.00 3.02
127 128 0.390340 GCATGTCGAGTGGAAGCTGA 60.390 55.000 0.00 0.00 0.00 4.26
128 129 1.690283 CGCATGTCGAGTGGAAGCTG 61.690 60.000 3.85 0.00 41.67 4.24
129 130 1.446792 CGCATGTCGAGTGGAAGCT 60.447 57.895 3.85 0.00 41.67 3.74
130 131 3.084579 CGCATGTCGAGTGGAAGC 58.915 61.111 3.85 0.00 41.67 3.86
131 132 2.456119 GGCGCATGTCGAGTGGAAG 61.456 63.158 10.83 0.00 41.67 3.46
132 133 2.434185 GGCGCATGTCGAGTGGAA 60.434 61.111 10.83 0.00 41.67 3.53
140 141 4.520846 CTTTCGGCGGCGCATGTC 62.521 66.667 34.36 15.21 0.00 3.06
150 151 1.333619 TGAAGTTCAACAGCTTTCGGC 59.666 47.619 2.20 0.00 42.19 5.54
151 152 3.003689 ACATGAAGTTCAACAGCTTTCGG 59.996 43.478 10.14 0.00 0.00 4.30
152 153 4.214980 ACATGAAGTTCAACAGCTTTCG 57.785 40.909 10.14 0.00 0.00 3.46
153 154 6.305693 ACTACATGAAGTTCAACAGCTTTC 57.694 37.500 10.14 0.00 0.00 2.62
154 155 7.801716 TTACTACATGAAGTTCAACAGCTTT 57.198 32.000 10.14 0.00 0.00 3.51
155 156 7.499232 ACTTTACTACATGAAGTTCAACAGCTT 59.501 33.333 10.14 0.00 33.47 3.74
156 157 6.992715 ACTTTACTACATGAAGTTCAACAGCT 59.007 34.615 10.14 0.00 33.47 4.24
157 158 7.042051 TGACTTTACTACATGAAGTTCAACAGC 60.042 37.037 10.14 0.00 37.27 4.40
158 159 8.365399 TGACTTTACTACATGAAGTTCAACAG 57.635 34.615 10.14 9.52 37.27 3.16
159 160 8.725405 TTGACTTTACTACATGAAGTTCAACA 57.275 30.769 10.14 0.00 37.27 3.33
160 161 9.997482 TTTTGACTTTACTACATGAAGTTCAAC 57.003 29.630 10.14 0.00 37.27 3.18
173 174 9.730420 GCTTTGTCAAGATTTTTGACTTTACTA 57.270 29.630 17.82 0.00 46.53 1.82
174 175 8.250332 TGCTTTGTCAAGATTTTTGACTTTACT 58.750 29.630 17.82 0.00 46.53 2.24
175 176 8.406172 TGCTTTGTCAAGATTTTTGACTTTAC 57.594 30.769 17.82 8.40 46.53 2.01
176 177 8.994429 TTGCTTTGTCAAGATTTTTGACTTTA 57.006 26.923 17.82 4.55 46.53 1.85
177 178 7.818930 TCTTGCTTTGTCAAGATTTTTGACTTT 59.181 29.630 17.82 0.00 45.21 2.66
178 179 7.322664 TCTTGCTTTGTCAAGATTTTTGACTT 58.677 30.769 17.82 0.00 45.21 3.01
179 180 6.866480 TCTTGCTTTGTCAAGATTTTTGACT 58.134 32.000 17.82 0.00 45.21 3.41
189 190 2.483876 TCCGTCTCTTGCTTTGTCAAG 58.516 47.619 0.00 0.00 43.53 3.02
190 191 2.613026 TCCGTCTCTTGCTTTGTCAA 57.387 45.000 0.00 0.00 0.00 3.18
191 192 2.613026 TTCCGTCTCTTGCTTTGTCA 57.387 45.000 0.00 0.00 0.00 3.58
192 193 3.548214 GGTTTTCCGTCTCTTGCTTTGTC 60.548 47.826 0.00 0.00 0.00 3.18
193 194 2.357952 GGTTTTCCGTCTCTTGCTTTGT 59.642 45.455 0.00 0.00 0.00 2.83
194 195 2.357637 TGGTTTTCCGTCTCTTGCTTTG 59.642 45.455 0.00 0.00 44.36 2.77
195 196 2.650322 TGGTTTTCCGTCTCTTGCTTT 58.350 42.857 0.00 0.00 44.36 3.51
196 197 2.341846 TGGTTTTCCGTCTCTTGCTT 57.658 45.000 0.00 0.00 44.36 3.91
197 198 2.341846 TTGGTTTTCCGTCTCTTGCT 57.658 45.000 0.00 0.00 44.36 3.91
198 199 2.552315 TGATTGGTTTTCCGTCTCTTGC 59.448 45.455 0.00 0.00 44.36 4.01
199 200 3.563808 TGTGATTGGTTTTCCGTCTCTTG 59.436 43.478 0.00 0.00 44.36 3.02
200 201 3.815401 CTGTGATTGGTTTTCCGTCTCTT 59.185 43.478 0.00 0.00 44.36 2.85
201 202 3.071023 TCTGTGATTGGTTTTCCGTCTCT 59.929 43.478 0.00 0.00 44.36 3.10
202 203 3.399330 TCTGTGATTGGTTTTCCGTCTC 58.601 45.455 0.00 0.00 44.36 3.36
203 204 3.485463 TCTGTGATTGGTTTTCCGTCT 57.515 42.857 0.00 0.00 44.36 4.18
204 205 3.304458 GGTTCTGTGATTGGTTTTCCGTC 60.304 47.826 0.00 0.00 44.36 4.79
205 206 2.621526 GGTTCTGTGATTGGTTTTCCGT 59.378 45.455 0.00 0.00 44.36 4.69
206 207 2.884639 AGGTTCTGTGATTGGTTTTCCG 59.115 45.455 0.00 0.00 44.36 4.30
207 208 3.888930 TGAGGTTCTGTGATTGGTTTTCC 59.111 43.478 0.00 0.00 41.14 3.13
208 209 4.338118 TGTGAGGTTCTGTGATTGGTTTTC 59.662 41.667 0.00 0.00 0.00 2.29
209 210 4.097892 GTGTGAGGTTCTGTGATTGGTTTT 59.902 41.667 0.00 0.00 0.00 2.43
210 211 3.632145 GTGTGAGGTTCTGTGATTGGTTT 59.368 43.478 0.00 0.00 0.00 3.27
211 212 3.214328 GTGTGAGGTTCTGTGATTGGTT 58.786 45.455 0.00 0.00 0.00 3.67
212 213 2.172505 TGTGTGAGGTTCTGTGATTGGT 59.827 45.455 0.00 0.00 0.00 3.67
213 214 2.849942 TGTGTGAGGTTCTGTGATTGG 58.150 47.619 0.00 0.00 0.00 3.16
214 215 3.627123 TGTTGTGTGAGGTTCTGTGATTG 59.373 43.478 0.00 0.00 0.00 2.67
215 216 3.879295 CTGTTGTGTGAGGTTCTGTGATT 59.121 43.478 0.00 0.00 0.00 2.57
216 217 3.134623 TCTGTTGTGTGAGGTTCTGTGAT 59.865 43.478 0.00 0.00 0.00 3.06
217 218 2.499693 TCTGTTGTGTGAGGTTCTGTGA 59.500 45.455 0.00 0.00 0.00 3.58
218 219 2.868583 CTCTGTTGTGTGAGGTTCTGTG 59.131 50.000 0.00 0.00 0.00 3.66
219 220 2.766263 TCTCTGTTGTGTGAGGTTCTGT 59.234 45.455 0.00 0.00 0.00 3.41
220 221 3.459232 TCTCTGTTGTGTGAGGTTCTG 57.541 47.619 0.00 0.00 0.00 3.02
221 222 3.007398 GGATCTCTGTTGTGTGAGGTTCT 59.993 47.826 0.00 0.00 0.00 3.01
222 223 3.330267 GGATCTCTGTTGTGTGAGGTTC 58.670 50.000 0.00 0.00 0.00 3.62
223 224 2.289072 CGGATCTCTGTTGTGTGAGGTT 60.289 50.000 0.00 0.00 0.00 3.50
224 225 1.273606 CGGATCTCTGTTGTGTGAGGT 59.726 52.381 0.00 0.00 0.00 3.85
225 226 2.001812 CGGATCTCTGTTGTGTGAGG 57.998 55.000 0.00 0.00 0.00 3.86
226 227 1.354040 GCGGATCTCTGTTGTGTGAG 58.646 55.000 0.00 0.00 0.00 3.51
227 228 0.388520 CGCGGATCTCTGTTGTGTGA 60.389 55.000 0.00 0.00 0.00 3.58
228 229 0.667487 ACGCGGATCTCTGTTGTGTG 60.667 55.000 12.47 0.00 0.00 3.82
229 230 0.388649 GACGCGGATCTCTGTTGTGT 60.389 55.000 12.47 0.00 0.00 3.72
230 231 0.388520 TGACGCGGATCTCTGTTGTG 60.389 55.000 12.47 0.00 0.00 3.33
231 232 0.109086 CTGACGCGGATCTCTGTTGT 60.109 55.000 12.47 0.00 0.00 3.32
232 233 0.803768 CCTGACGCGGATCTCTGTTG 60.804 60.000 12.47 0.00 0.00 3.33
233 234 0.965866 TCCTGACGCGGATCTCTGTT 60.966 55.000 12.47 0.00 0.00 3.16
234 235 1.378646 TCCTGACGCGGATCTCTGT 60.379 57.895 12.47 0.00 0.00 3.41
235 236 1.064946 GTCCTGACGCGGATCTCTG 59.935 63.158 12.47 2.48 35.11 3.35
236 237 0.965866 TTGTCCTGACGCGGATCTCT 60.966 55.000 12.47 0.00 35.11 3.10
237 238 0.108804 TTTGTCCTGACGCGGATCTC 60.109 55.000 12.47 0.00 35.11 2.75
238 239 0.389948 GTTTGTCCTGACGCGGATCT 60.390 55.000 12.47 0.00 35.11 2.75
239 240 0.669318 TGTTTGTCCTGACGCGGATC 60.669 55.000 12.47 0.00 35.11 3.36
240 241 0.250124 TTGTTTGTCCTGACGCGGAT 60.250 50.000 12.47 0.00 35.11 4.18
241 242 0.462225 TTTGTTTGTCCTGACGCGGA 60.462 50.000 12.47 0.00 0.00 5.54
242 243 0.316689 GTTTGTTTGTCCTGACGCGG 60.317 55.000 12.47 0.00 0.00 6.46
243 244 0.316689 GGTTTGTTTGTCCTGACGCG 60.317 55.000 3.53 3.53 0.00 6.01
244 245 0.736053 TGGTTTGTTTGTCCTGACGC 59.264 50.000 0.00 0.00 0.00 5.19
245 246 1.268539 GCTGGTTTGTTTGTCCTGACG 60.269 52.381 0.00 0.00 0.00 4.35
246 247 1.748493 TGCTGGTTTGTTTGTCCTGAC 59.252 47.619 0.00 0.00 0.00 3.51
247 248 1.748493 GTGCTGGTTTGTTTGTCCTGA 59.252 47.619 0.00 0.00 0.00 3.86
248 249 1.202405 GGTGCTGGTTTGTTTGTCCTG 60.202 52.381 0.00 0.00 0.00 3.86
249 250 1.111277 GGTGCTGGTTTGTTTGTCCT 58.889 50.000 0.00 0.00 0.00 3.85
250 251 0.820871 TGGTGCTGGTTTGTTTGTCC 59.179 50.000 0.00 0.00 0.00 4.02
251 252 1.203523 TGTGGTGCTGGTTTGTTTGTC 59.796 47.619 0.00 0.00 0.00 3.18
252 253 1.067213 GTGTGGTGCTGGTTTGTTTGT 60.067 47.619 0.00 0.00 0.00 2.83
253 254 1.639280 GTGTGGTGCTGGTTTGTTTG 58.361 50.000 0.00 0.00 0.00 2.93
254 255 0.534873 GGTGTGGTGCTGGTTTGTTT 59.465 50.000 0.00 0.00 0.00 2.83
255 256 1.662438 CGGTGTGGTGCTGGTTTGTT 61.662 55.000 0.00 0.00 0.00 2.83
256 257 2.118404 CGGTGTGGTGCTGGTTTGT 61.118 57.895 0.00 0.00 0.00 2.83
257 258 0.816018 TACGGTGTGGTGCTGGTTTG 60.816 55.000 0.00 0.00 0.00 2.93
258 259 0.534203 CTACGGTGTGGTGCTGGTTT 60.534 55.000 0.00 0.00 0.00 3.27
259 260 1.070786 CTACGGTGTGGTGCTGGTT 59.929 57.895 0.00 0.00 0.00 3.67
260 261 2.741092 CTACGGTGTGGTGCTGGT 59.259 61.111 0.00 0.00 0.00 4.00
261 262 2.742372 GCTACGGTGTGGTGCTGG 60.742 66.667 0.00 0.00 0.00 4.85
262 263 3.112075 CGCTACGGTGTGGTGCTG 61.112 66.667 0.00 0.00 0.00 4.41
263 264 3.612681 ACGCTACGGTGTGGTGCT 61.613 61.111 0.00 0.00 34.60 4.40
264 265 3.411351 CACGCTACGGTGTGGTGC 61.411 66.667 2.24 0.00 46.59 5.01
269 270 3.299977 TCCAGCACGCTACGGTGT 61.300 61.111 0.00 0.00 40.08 4.16
270 271 2.809601 GTCCAGCACGCTACGGTG 60.810 66.667 0.00 0.00 40.89 4.94
271 272 2.863346 TTGTCCAGCACGCTACGGT 61.863 57.895 0.00 0.00 0.00 4.83
272 273 2.048597 TTGTCCAGCACGCTACGG 60.049 61.111 0.00 0.00 0.00 4.02
273 274 0.109458 TAGTTGTCCAGCACGCTACG 60.109 55.000 0.00 0.00 0.00 3.51
274 275 1.347320 GTAGTTGTCCAGCACGCTAC 58.653 55.000 0.00 0.00 32.58 3.58
275 276 0.109458 CGTAGTTGTCCAGCACGCTA 60.109 55.000 0.00 0.00 0.00 4.26
276 277 1.372997 CGTAGTTGTCCAGCACGCT 60.373 57.895 0.00 0.00 0.00 5.07
277 278 2.380410 CCGTAGTTGTCCAGCACGC 61.380 63.158 0.00 0.00 0.00 5.34
278 279 1.006571 ACCGTAGTTGTCCAGCACG 60.007 57.895 0.00 0.00 0.00 5.34
279 280 0.032952 TCACCGTAGTTGTCCAGCAC 59.967 55.000 0.00 0.00 0.00 4.40
280 281 0.317160 CTCACCGTAGTTGTCCAGCA 59.683 55.000 0.00 0.00 0.00 4.41
281 282 0.601558 TCTCACCGTAGTTGTCCAGC 59.398 55.000 0.00 0.00 0.00 4.85
282 283 1.067776 GGTCTCACCGTAGTTGTCCAG 60.068 57.143 0.00 0.00 0.00 3.86
283 284 0.963962 GGTCTCACCGTAGTTGTCCA 59.036 55.000 0.00 0.00 0.00 4.02
284 285 3.808583 GGTCTCACCGTAGTTGTCC 57.191 57.895 0.00 0.00 0.00 4.02
294 295 0.824759 ATCTTGGCTACGGTCTCACC 59.175 55.000 0.00 0.00 34.05 4.02
295 296 1.476891 TGATCTTGGCTACGGTCTCAC 59.523 52.381 0.00 0.00 0.00 3.51
296 297 1.476891 GTGATCTTGGCTACGGTCTCA 59.523 52.381 0.00 0.00 0.00 3.27
297 298 1.202428 GGTGATCTTGGCTACGGTCTC 60.202 57.143 0.00 0.00 0.00 3.36
298 299 0.824759 GGTGATCTTGGCTACGGTCT 59.175 55.000 0.00 0.00 0.00 3.85
299 300 0.535335 TGGTGATCTTGGCTACGGTC 59.465 55.000 0.00 0.00 0.00 4.79
300 301 0.249398 GTGGTGATCTTGGCTACGGT 59.751 55.000 0.00 0.00 0.00 4.83
301 302 0.462047 GGTGGTGATCTTGGCTACGG 60.462 60.000 0.00 0.00 0.00 4.02
302 303 0.462047 GGGTGGTGATCTTGGCTACG 60.462 60.000 0.00 0.00 0.00 3.51
303 304 0.618458 TGGGTGGTGATCTTGGCTAC 59.382 55.000 0.00 0.00 0.00 3.58
304 305 1.367346 TTGGGTGGTGATCTTGGCTA 58.633 50.000 0.00 0.00 0.00 3.93
305 306 0.706433 ATTGGGTGGTGATCTTGGCT 59.294 50.000 0.00 0.00 0.00 4.75
306 307 1.106285 GATTGGGTGGTGATCTTGGC 58.894 55.000 0.00 0.00 0.00 4.52
307 308 2.814805 AGATTGGGTGGTGATCTTGG 57.185 50.000 0.00 0.00 0.00 3.61
308 309 4.494091 ACTAGATTGGGTGGTGATCTTG 57.506 45.455 0.00 0.00 32.68 3.02
309 310 5.104485 GGTAACTAGATTGGGTGGTGATCTT 60.104 44.000 0.00 0.00 32.68 2.40
310 311 4.409247 GGTAACTAGATTGGGTGGTGATCT 59.591 45.833 0.00 0.00 34.67 2.75
311 312 4.163458 TGGTAACTAGATTGGGTGGTGATC 59.837 45.833 0.00 0.00 37.61 2.92
312 313 4.080526 GTGGTAACTAGATTGGGTGGTGAT 60.081 45.833 0.00 0.00 37.61 3.06
313 314 3.262405 GTGGTAACTAGATTGGGTGGTGA 59.738 47.826 0.00 0.00 37.61 4.02
314 315 3.008594 TGTGGTAACTAGATTGGGTGGTG 59.991 47.826 0.00 0.00 37.61 4.17
315 316 3.008704 GTGTGGTAACTAGATTGGGTGGT 59.991 47.826 0.00 0.00 37.61 4.16
316 317 3.008594 TGTGTGGTAACTAGATTGGGTGG 59.991 47.826 0.00 0.00 37.61 4.61
317 318 4.280436 TGTGTGGTAACTAGATTGGGTG 57.720 45.455 0.00 0.00 37.61 4.61
318 319 4.843728 CATGTGTGGTAACTAGATTGGGT 58.156 43.478 0.00 0.00 37.61 4.51
319 320 3.627577 GCATGTGTGGTAACTAGATTGGG 59.372 47.826 0.00 0.00 37.61 4.12
320 321 3.627577 GGCATGTGTGGTAACTAGATTGG 59.372 47.826 0.00 0.00 37.61 3.16
321 322 4.517285 AGGCATGTGTGGTAACTAGATTG 58.483 43.478 0.00 0.00 37.61 2.67
322 323 4.844349 AGGCATGTGTGGTAACTAGATT 57.156 40.909 0.00 0.00 37.61 2.40
323 324 4.844349 AAGGCATGTGTGGTAACTAGAT 57.156 40.909 0.00 0.00 37.61 1.98
324 325 4.634012 AAAGGCATGTGTGGTAACTAGA 57.366 40.909 0.00 0.00 37.61 2.43
325 326 5.703592 TGTAAAAGGCATGTGTGGTAACTAG 59.296 40.000 0.00 0.00 37.61 2.57
326 327 5.470777 GTGTAAAAGGCATGTGTGGTAACTA 59.529 40.000 0.00 0.00 37.61 2.24
327 328 4.277423 GTGTAAAAGGCATGTGTGGTAACT 59.723 41.667 0.00 0.00 37.61 2.24
328 329 4.036971 TGTGTAAAAGGCATGTGTGGTAAC 59.963 41.667 0.00 0.00 0.00 2.50
329 330 4.036971 GTGTGTAAAAGGCATGTGTGGTAA 59.963 41.667 0.00 0.00 0.00 2.85
330 331 3.566322 GTGTGTAAAAGGCATGTGTGGTA 59.434 43.478 0.00 0.00 0.00 3.25
331 332 2.360801 GTGTGTAAAAGGCATGTGTGGT 59.639 45.455 0.00 0.00 0.00 4.16
332 333 2.604373 CGTGTGTAAAAGGCATGTGTGG 60.604 50.000 0.00 0.00 0.00 4.17
333 334 2.649516 CGTGTGTAAAAGGCATGTGTG 58.350 47.619 0.00 0.00 0.00 3.82
334 335 1.001815 GCGTGTGTAAAAGGCATGTGT 60.002 47.619 0.00 0.00 34.42 3.72
335 336 1.001924 TGCGTGTGTAAAAGGCATGTG 60.002 47.619 0.00 0.00 40.55 3.21
336 337 1.313772 TGCGTGTGTAAAAGGCATGT 58.686 45.000 0.00 0.00 40.55 3.21
339 340 1.384525 AAGTGCGTGTGTAAAAGGCA 58.615 45.000 0.00 0.00 43.70 4.75
340 341 2.381589 GAAAGTGCGTGTGTAAAAGGC 58.618 47.619 0.00 0.00 34.97 4.35
341 342 2.356382 TGGAAAGTGCGTGTGTAAAAGG 59.644 45.455 0.00 0.00 0.00 3.11
342 343 3.684103 TGGAAAGTGCGTGTGTAAAAG 57.316 42.857 0.00 0.00 0.00 2.27
343 344 3.243234 CCATGGAAAGTGCGTGTGTAAAA 60.243 43.478 5.56 0.00 0.00 1.52
344 345 2.292016 CCATGGAAAGTGCGTGTGTAAA 59.708 45.455 5.56 0.00 0.00 2.01
345 346 1.876799 CCATGGAAAGTGCGTGTGTAA 59.123 47.619 5.56 0.00 0.00 2.41
346 347 1.070914 TCCATGGAAAGTGCGTGTGTA 59.929 47.619 13.46 0.00 0.00 2.90
347 348 0.179032 TCCATGGAAAGTGCGTGTGT 60.179 50.000 13.46 0.00 0.00 3.72
348 349 0.238289 GTCCATGGAAAGTGCGTGTG 59.762 55.000 18.20 0.00 0.00 3.82
349 350 0.108585 AGTCCATGGAAAGTGCGTGT 59.891 50.000 18.20 0.00 0.00 4.49
350 351 1.732259 GTAGTCCATGGAAAGTGCGTG 59.268 52.381 18.20 0.00 0.00 5.34
351 352 1.346395 TGTAGTCCATGGAAAGTGCGT 59.654 47.619 18.20 0.00 0.00 5.24
352 353 2.093306 TGTAGTCCATGGAAAGTGCG 57.907 50.000 18.20 0.00 0.00 5.34
353 354 2.749621 CCTTGTAGTCCATGGAAAGTGC 59.250 50.000 18.20 8.53 40.10 4.40
354 355 2.749621 GCCTTGTAGTCCATGGAAAGTG 59.250 50.000 18.20 11.12 40.10 3.16
355 356 2.290960 GGCCTTGTAGTCCATGGAAAGT 60.291 50.000 18.20 6.89 40.10 2.66
356 357 2.369394 GGCCTTGTAGTCCATGGAAAG 58.631 52.381 18.20 15.98 40.10 2.62
357 358 1.005450 GGGCCTTGTAGTCCATGGAAA 59.995 52.381 18.20 6.19 40.10 3.13
358 359 0.623723 GGGCCTTGTAGTCCATGGAA 59.376 55.000 18.20 0.00 40.10 3.53
359 360 0.548926 TGGGCCTTGTAGTCCATGGA 60.549 55.000 11.44 11.44 40.10 3.41
360 361 0.107017 CTGGGCCTTGTAGTCCATGG 60.107 60.000 4.97 4.97 40.53 3.66
361 362 0.749454 GCTGGGCCTTGTAGTCCATG 60.749 60.000 4.53 0.00 0.00 3.66
362 363 1.207488 TGCTGGGCCTTGTAGTCCAT 61.207 55.000 4.53 0.00 0.00 3.41
363 364 1.841302 CTGCTGGGCCTTGTAGTCCA 61.841 60.000 4.53 0.00 0.00 4.02
364 365 1.078143 CTGCTGGGCCTTGTAGTCC 60.078 63.158 4.53 0.00 0.00 3.85
365 366 0.391793 GTCTGCTGGGCCTTGTAGTC 60.392 60.000 4.53 1.07 0.00 2.59
366 367 1.679898 GTCTGCTGGGCCTTGTAGT 59.320 57.895 4.53 0.00 0.00 2.73
367 368 1.448540 CGTCTGCTGGGCCTTGTAG 60.449 63.158 4.53 6.98 0.00 2.74
368 369 1.888436 CTCGTCTGCTGGGCCTTGTA 61.888 60.000 4.53 0.00 0.00 2.41
369 370 3.241530 TCGTCTGCTGGGCCTTGT 61.242 61.111 4.53 0.00 0.00 3.16
370 371 2.435586 CTCGTCTGCTGGGCCTTG 60.436 66.667 4.53 0.00 0.00 3.61
371 372 4.400961 GCTCGTCTGCTGGGCCTT 62.401 66.667 4.53 0.00 0.00 4.35
377 378 0.458197 CTTCTCCTGCTCGTCTGCTG 60.458 60.000 0.00 0.00 0.00 4.41
378 379 0.610509 TCTTCTCCTGCTCGTCTGCT 60.611 55.000 0.00 0.00 0.00 4.24
379 380 0.244994 TTCTTCTCCTGCTCGTCTGC 59.755 55.000 0.00 0.00 0.00 4.26
380 381 1.270826 TGTTCTTCTCCTGCTCGTCTG 59.729 52.381 0.00 0.00 0.00 3.51
381 382 1.543802 CTGTTCTTCTCCTGCTCGTCT 59.456 52.381 0.00 0.00 0.00 4.18
382 383 1.989430 CTGTTCTTCTCCTGCTCGTC 58.011 55.000 0.00 0.00 0.00 4.20
383 384 0.037790 GCTGTTCTTCTCCTGCTCGT 60.038 55.000 0.00 0.00 0.00 4.18
384 385 0.037882 TGCTGTTCTTCTCCTGCTCG 60.038 55.000 0.00 0.00 0.00 5.03
385 386 1.274728 TCTGCTGTTCTTCTCCTGCTC 59.725 52.381 0.00 0.00 0.00 4.26
386 387 1.001860 GTCTGCTGTTCTTCTCCTGCT 59.998 52.381 0.00 0.00 0.00 4.24
387 388 1.437625 GTCTGCTGTTCTTCTCCTGC 58.562 55.000 0.00 0.00 0.00 4.85
388 389 1.270826 TCGTCTGCTGTTCTTCTCCTG 59.729 52.381 0.00 0.00 0.00 3.86
389 390 1.271102 GTCGTCTGCTGTTCTTCTCCT 59.729 52.381 0.00 0.00 0.00 3.69
390 391 1.704070 GTCGTCTGCTGTTCTTCTCC 58.296 55.000 0.00 0.00 0.00 3.71
391 392 1.332178 CGTCGTCTGCTGTTCTTCTC 58.668 55.000 0.00 0.00 0.00 2.87
392 393 0.664767 GCGTCGTCTGCTGTTCTTCT 60.665 55.000 0.00 0.00 0.00 2.85
393 394 1.618640 GGCGTCGTCTGCTGTTCTTC 61.619 60.000 0.00 0.00 0.00 2.87
394 395 1.664965 GGCGTCGTCTGCTGTTCTT 60.665 57.895 0.00 0.00 0.00 2.52
395 396 1.241990 TAGGCGTCGTCTGCTGTTCT 61.242 55.000 10.21 0.00 0.00 3.01
396 397 1.071567 GTAGGCGTCGTCTGCTGTTC 61.072 60.000 10.21 0.00 0.00 3.18
397 398 1.080705 GTAGGCGTCGTCTGCTGTT 60.081 57.895 10.21 0.00 0.00 3.16
398 399 2.265904 TGTAGGCGTCGTCTGCTGT 61.266 57.895 15.93 0.00 0.00 4.40
399 400 1.801913 GTGTAGGCGTCGTCTGCTG 60.802 63.158 15.93 0.00 0.00 4.41
400 401 2.567049 GTGTAGGCGTCGTCTGCT 59.433 61.111 15.93 0.00 0.00 4.24
401 402 2.506438 GGTGTAGGCGTCGTCTGC 60.506 66.667 10.21 9.09 0.00 4.26
402 403 1.154016 CTGGTGTAGGCGTCGTCTG 60.154 63.158 10.21 0.00 0.00 3.51
403 404 2.991076 GCTGGTGTAGGCGTCGTCT 61.991 63.158 4.10 4.10 0.00 4.18
404 405 2.506438 GCTGGTGTAGGCGTCGTC 60.506 66.667 0.00 0.00 0.00 4.20
405 406 4.415332 CGCTGGTGTAGGCGTCGT 62.415 66.667 0.00 0.00 45.34 4.34
410 411 2.573609 AATCCGTCGCTGGTGTAGGC 62.574 60.000 0.00 0.00 0.00 3.93
411 412 0.108329 AAATCCGTCGCTGGTGTAGG 60.108 55.000 0.00 0.00 0.00 3.18
412 413 0.999406 CAAATCCGTCGCTGGTGTAG 59.001 55.000 0.00 0.00 0.00 2.74
413 414 0.319083 ACAAATCCGTCGCTGGTGTA 59.681 50.000 0.00 0.00 0.00 2.90
414 415 0.534203 AACAAATCCGTCGCTGGTGT 60.534 50.000 0.00 0.00 0.00 4.16
415 416 0.110238 CAACAAATCCGTCGCTGGTG 60.110 55.000 0.00 0.00 0.00 4.17
416 417 0.250124 TCAACAAATCCGTCGCTGGT 60.250 50.000 0.00 0.00 0.00 4.00
417 418 0.165944 GTCAACAAATCCGTCGCTGG 59.834 55.000 0.00 0.00 0.00 4.85
418 419 0.179250 CGTCAACAAATCCGTCGCTG 60.179 55.000 0.00 0.00 0.00 5.18
419 420 1.897398 GCGTCAACAAATCCGTCGCT 61.897 55.000 0.00 0.00 39.26 4.93
420 421 1.509162 GCGTCAACAAATCCGTCGC 60.509 57.895 0.00 0.00 35.86 5.19
421 422 0.450482 GTGCGTCAACAAATCCGTCG 60.450 55.000 0.00 0.00 0.00 5.12
422 423 0.865769 AGTGCGTCAACAAATCCGTC 59.134 50.000 0.00 0.00 0.00 4.79
423 424 1.305201 AAGTGCGTCAACAAATCCGT 58.695 45.000 0.00 0.00 0.00 4.69
424 425 2.307049 GAAAGTGCGTCAACAAATCCG 58.693 47.619 0.00 0.00 0.00 4.18
425 426 2.034053 TGGAAAGTGCGTCAACAAATCC 59.966 45.455 0.00 0.00 0.00 3.01
426 427 3.347958 TGGAAAGTGCGTCAACAAATC 57.652 42.857 0.00 0.00 0.00 2.17
427 428 3.552684 CCATGGAAAGTGCGTCAACAAAT 60.553 43.478 5.56 0.00 0.00 2.32
428 429 2.223688 CCATGGAAAGTGCGTCAACAAA 60.224 45.455 5.56 0.00 0.00 2.83
429 430 1.336440 CCATGGAAAGTGCGTCAACAA 59.664 47.619 5.56 0.00 0.00 2.83
430 431 0.950836 CCATGGAAAGTGCGTCAACA 59.049 50.000 5.56 0.00 0.00 3.33
431 432 1.069227 GTCCATGGAAAGTGCGTCAAC 60.069 52.381 18.20 0.00 0.00 3.18
432 433 1.202758 AGTCCATGGAAAGTGCGTCAA 60.203 47.619 18.20 0.00 0.00 3.18
433 434 0.396435 AGTCCATGGAAAGTGCGTCA 59.604 50.000 18.20 0.00 0.00 4.35
434 435 1.197721 CAAGTCCATGGAAAGTGCGTC 59.802 52.381 18.20 0.67 0.00 5.19
435 436 1.238439 CAAGTCCATGGAAAGTGCGT 58.762 50.000 18.20 0.00 0.00 5.24
436 437 0.109597 GCAAGTCCATGGAAAGTGCG 60.110 55.000 18.20 3.27 0.00 5.34
437 438 1.068055 CAGCAAGTCCATGGAAAGTGC 60.068 52.381 26.82 26.82 0.00 4.40
438 439 1.542915 CCAGCAAGTCCATGGAAAGTG 59.457 52.381 18.20 15.41 36.09 3.16
439 440 1.915141 CCAGCAAGTCCATGGAAAGT 58.085 50.000 18.20 0.64 36.09 2.66
440 441 0.529378 GCCAGCAAGTCCATGGAAAG 59.471 55.000 18.20 10.47 36.09 2.62
441 442 0.178967 TGCCAGCAAGTCCATGGAAA 60.179 50.000 18.20 0.00 36.09 3.13
442 443 0.040058 ATGCCAGCAAGTCCATGGAA 59.960 50.000 18.20 0.00 36.09 3.53
443 444 0.681887 CATGCCAGCAAGTCCATGGA 60.682 55.000 11.44 11.44 36.09 3.41
444 445 0.968901 ACATGCCAGCAAGTCCATGG 60.969 55.000 4.97 4.97 39.39 3.66
445 446 0.892755 AACATGCCAGCAAGTCCATG 59.107 50.000 0.44 0.00 40.54 3.66
446 447 1.180029 GAACATGCCAGCAAGTCCAT 58.820 50.000 0.44 0.00 0.00 3.41
447 448 0.111061 AGAACATGCCAGCAAGTCCA 59.889 50.000 0.44 0.00 0.00 4.02
448 449 1.068055 CAAGAACATGCCAGCAAGTCC 60.068 52.381 0.44 0.00 0.00 3.85
449 450 1.610522 ACAAGAACATGCCAGCAAGTC 59.389 47.619 0.44 0.00 0.00 3.01
450 451 1.696063 ACAAGAACATGCCAGCAAGT 58.304 45.000 0.00 0.00 0.00 3.16
451 452 2.806608 AACAAGAACATGCCAGCAAG 57.193 45.000 0.00 0.00 0.00 4.01
452 453 2.543445 CGAAACAAGAACATGCCAGCAA 60.543 45.455 0.00 0.00 0.00 3.91
453 454 1.001487 CGAAACAAGAACATGCCAGCA 60.001 47.619 0.00 0.00 0.00 4.41
454 455 1.689959 CGAAACAAGAACATGCCAGC 58.310 50.000 0.00 0.00 0.00 4.85
462 463 3.064271 TGTGTAACAGGCGAAACAAGAAC 59.936 43.478 0.00 0.00 45.67 3.01
515 516 6.811253 AAAATTCTACGTGCCAACTTCATA 57.189 33.333 0.00 0.00 0.00 2.15
516 517 5.705609 AAAATTCTACGTGCCAACTTCAT 57.294 34.783 0.00 0.00 0.00 2.57
569 603 6.768381 CCAGATACTAGACATTCTTTTTCCCC 59.232 42.308 0.00 0.00 0.00 4.81
570 604 7.565680 TCCAGATACTAGACATTCTTTTTCCC 58.434 38.462 0.00 0.00 0.00 3.97
571 605 9.050601 CATCCAGATACTAGACATTCTTTTTCC 57.949 37.037 0.00 0.00 0.00 3.13
572 606 9.823647 TCATCCAGATACTAGACATTCTTTTTC 57.176 33.333 0.00 0.00 0.00 2.29
577 611 6.496218 TGCATCATCCAGATACTAGACATTCT 59.504 38.462 0.00 0.00 34.43 2.40
581 615 4.895297 TGTGCATCATCCAGATACTAGACA 59.105 41.667 0.00 0.00 34.43 3.41
587 622 2.138320 CCGTGTGCATCATCCAGATAC 58.862 52.381 0.00 0.00 34.43 2.24
592 627 2.438254 GGCCGTGTGCATCATCCA 60.438 61.111 0.00 0.00 43.89 3.41
594 629 1.378882 ATGTGGCCGTGTGCATCATC 61.379 55.000 0.00 0.00 43.89 2.92
596 631 2.033911 ATGTGGCCGTGTGCATCA 59.966 55.556 0.00 0.00 43.89 3.07
608 643 7.095649 CGTACATATATTGGTCACTTCATGTGG 60.096 40.741 0.00 0.00 46.20 4.17
611 646 6.423604 TGCGTACATATATTGGTCACTTCATG 59.576 38.462 0.00 0.00 0.00 3.07
642 677 2.402305 AGATGAAGCGAGATTGCGATC 58.598 47.619 5.74 5.74 40.67 3.69
670 705 2.735259 AACCCCTCCTCCTTGACTTA 57.265 50.000 0.00 0.00 0.00 2.24
756 2851 0.316360 CGCGGTTGCACGTACTTTTT 60.316 50.000 0.00 0.00 42.97 1.94
757 2852 1.277440 CGCGGTTGCACGTACTTTT 59.723 52.632 0.00 0.00 42.97 2.27
758 2853 2.932905 CGCGGTTGCACGTACTTT 59.067 55.556 0.00 0.00 42.97 2.66
759 2854 3.708734 GCGCGGTTGCACGTACTT 61.709 61.111 8.83 0.00 42.97 2.24
768 2863 2.113131 AAGAAAAGGTCGCGCGGTTG 62.113 55.000 31.69 0.71 0.00 3.77
811 2906 4.691216 GGCCGGTATATCTGTTGATTCTTC 59.309 45.833 1.90 0.00 34.32 2.87
901 3002 3.038280 TGGAGACATATATATGGCCGGG 58.962 50.000 22.62 0.00 42.81 5.73
1209 3322 1.074872 GGCTGGCGTACTTGTCGTAC 61.075 60.000 0.00 0.00 44.04 3.67
1286 3399 1.068434 ACAATCAAGCACCAAAACCGG 59.932 47.619 0.00 0.00 0.00 5.28
1290 3403 4.870363 GCTTAGACAATCAAGCACCAAAA 58.130 39.130 1.62 0.00 45.20 2.44
1344 3459 4.398988 AGAGGAGATCATCGATCATGCTAC 59.601 45.833 0.00 0.00 41.12 3.58
1364 3479 6.790282 TGAACGAAGTGAATATCAGAGAGAG 58.210 40.000 0.00 0.00 45.00 3.20
1370 3485 5.496387 GTGCATGAACGAAGTGAATATCAG 58.504 41.667 0.00 0.00 45.00 2.90
1391 3506 0.534412 ACAGATCGGAGCAAGAGGTG 59.466 55.000 0.00 0.00 0.00 4.00
1392 3507 0.534412 CACAGATCGGAGCAAGAGGT 59.466 55.000 0.00 0.00 0.00 3.85
1446 3568 6.323225 AGGCGGAAGTAAGTAGATTAAGCTAA 59.677 38.462 1.19 0.00 0.00 3.09
1470 3592 7.933396 TCATGCTAAATTGACCATCATTACAG 58.067 34.615 0.00 0.00 0.00 2.74
1480 3602 6.991531 AGAGAAGAGATCATGCTAAATTGACC 59.008 38.462 0.00 0.00 0.00 4.02
1481 3603 7.927629 AGAGAGAAGAGATCATGCTAAATTGAC 59.072 37.037 0.00 0.00 0.00 3.18
1519 3729 7.115805 GCGATGCAACATTCATATGATCAAATT 59.884 33.333 6.17 0.00 35.65 1.82
1543 3852 1.857217 CAGATGCTGCAGTAGTAAGCG 59.143 52.381 16.64 0.00 39.88 4.68
1545 3854 4.983538 CAGATCAGATGCTGCAGTAGTAAG 59.016 45.833 16.64 2.89 0.00 2.34
1555 3864 4.153296 GCAATCAGATCAGATCAGATGCTG 59.847 45.833 16.81 13.54 35.93 4.41
1557 3866 4.320023 AGCAATCAGATCAGATCAGATGC 58.680 43.478 16.81 19.03 35.93 3.91
1617 3926 9.695526 CAATCAGGTCATGTAAAATTTCTCAAA 57.304 29.630 0.00 0.00 0.00 2.69
1618 3927 8.306038 CCAATCAGGTCATGTAAAATTTCTCAA 58.694 33.333 0.00 0.00 0.00 3.02
1619 3928 7.577426 GCCAATCAGGTCATGTAAAATTTCTCA 60.577 37.037 0.00 0.00 40.61 3.27
1620 3929 6.753744 GCCAATCAGGTCATGTAAAATTTCTC 59.246 38.462 0.00 0.00 40.61 2.87
1621 3930 6.438425 AGCCAATCAGGTCATGTAAAATTTCT 59.562 34.615 0.00 0.00 40.61 2.52
1622 3931 6.633856 AGCCAATCAGGTCATGTAAAATTTC 58.366 36.000 0.00 0.00 40.61 2.17
1623 3932 6.610075 AGCCAATCAGGTCATGTAAAATTT 57.390 33.333 0.00 0.00 40.61 1.82
1624 3933 6.610075 AAGCCAATCAGGTCATGTAAAATT 57.390 33.333 0.00 0.00 40.61 1.82
1625 3934 6.610075 AAAGCCAATCAGGTCATGTAAAAT 57.390 33.333 0.00 0.00 40.61 1.82
1626 3935 6.418057 AAAAGCCAATCAGGTCATGTAAAA 57.582 33.333 0.00 0.00 40.61 1.52
1627 3936 6.719370 AGTAAAAGCCAATCAGGTCATGTAAA 59.281 34.615 0.00 0.00 40.61 2.01
1628 3937 6.245408 AGTAAAAGCCAATCAGGTCATGTAA 58.755 36.000 0.00 0.00 40.61 2.41
1629 3938 5.815581 AGTAAAAGCCAATCAGGTCATGTA 58.184 37.500 0.00 0.00 40.61 2.29
1630 3939 4.666512 AGTAAAAGCCAATCAGGTCATGT 58.333 39.130 0.00 0.00 40.61 3.21
1631 3940 5.649782 AAGTAAAAGCCAATCAGGTCATG 57.350 39.130 0.00 0.00 40.61 3.07
1632 3941 5.774690 TCAAAGTAAAAGCCAATCAGGTCAT 59.225 36.000 0.00 0.00 40.61 3.06
1633 3942 5.136828 TCAAAGTAAAAGCCAATCAGGTCA 58.863 37.500 0.00 0.00 40.61 4.02
1634 3943 5.703876 CTCAAAGTAAAAGCCAATCAGGTC 58.296 41.667 0.00 0.00 40.61 3.85
1635 3944 4.021981 GCTCAAAGTAAAAGCCAATCAGGT 60.022 41.667 0.00 0.00 40.61 4.00
1636 3945 4.022068 TGCTCAAAGTAAAAGCCAATCAGG 60.022 41.667 0.00 0.00 41.84 3.86
1651 3960 8.030106 ACTAGTAGCTAGTTAAGTTGCTCAAAG 58.970 37.037 20.28 16.90 43.82 2.77
1689 3998 2.170187 GCTTGGTGACCAGATCAGATCT 59.830 50.000 7.15 7.15 38.28 2.75
1696 4005 1.134580 CGATCTGCTTGGTGACCAGAT 60.135 52.381 3.77 3.91 46.01 2.90
1704 4013 1.065926 TGATCTTGCGATCTGCTTGGT 60.066 47.619 10.16 1.14 45.10 3.67
1710 4019 8.724229 TGGAATTAATATTGATCTTGCGATCTG 58.276 33.333 0.00 0.00 45.10 2.90
1731 4040 3.040147 ACGACGATGTTTCAGTGGAAT 57.960 42.857 0.00 0.00 31.93 3.01
1782 4093 6.992123 TCACAATTAATCCAGCGTATGATCTT 59.008 34.615 0.00 0.00 0.00 2.40
1784 4095 6.785488 TCACAATTAATCCAGCGTATGATC 57.215 37.500 0.00 0.00 0.00 2.92
1785 4096 7.750229 AATCACAATTAATCCAGCGTATGAT 57.250 32.000 0.00 0.00 0.00 2.45
1786 4097 7.066887 ACAAATCACAATTAATCCAGCGTATGA 59.933 33.333 0.00 0.00 0.00 2.15
1787 4098 7.195646 ACAAATCACAATTAATCCAGCGTATG 58.804 34.615 0.00 0.00 0.00 2.39
1788 4099 7.333528 ACAAATCACAATTAATCCAGCGTAT 57.666 32.000 0.00 0.00 0.00 3.06
1792 4104 6.212888 AGGACAAATCACAATTAATCCAGC 57.787 37.500 0.00 0.00 33.97 4.85
1795 4107 9.450807 CGAATTAGGACAAATCACAATTAATCC 57.549 33.333 0.00 0.00 32.65 3.01
1813 4125 5.477291 TCCTCATCCTAGTTAGCGAATTAGG 59.523 44.000 18.35 18.35 43.31 2.69
1821 4133 4.107127 TCTCCTCCTCATCCTAGTTAGC 57.893 50.000 0.00 0.00 0.00 3.09
1868 4184 2.809174 TCGTTCATCAGCGCCACG 60.809 61.111 2.29 3.52 0.00 4.94
2093 4409 2.431683 GTCTTGTGCTCCCTGCCA 59.568 61.111 0.00 0.00 42.00 4.92
2377 4704 1.204941 GCATTAGACGACTGGACCTGT 59.795 52.381 3.26 3.26 0.00 4.00
2390 4717 5.304614 GGTAAGAGTGGATGGTAGCATTAGA 59.695 44.000 9.14 0.00 0.00 2.10
2398 4725 0.742505 CGCGGTAAGAGTGGATGGTA 59.257 55.000 0.00 0.00 0.00 3.25
2402 4729 1.378882 TACGCGCGGTAAGAGTGGAT 61.379 55.000 35.22 10.75 34.36 3.41
2450 4790 8.851145 TGACAAATTAACCAAGTGCTGTTATAA 58.149 29.630 0.00 0.00 0.00 0.98
2468 4808 4.509616 CATGGTTCCATGCATGACAAATT 58.490 39.130 28.31 5.82 37.58 1.82
2477 4817 2.570774 ATCGGCCATGGTTCCATGCA 62.571 55.000 22.18 9.06 41.60 3.96
2478 4818 1.799258 GATCGGCCATGGTTCCATGC 61.799 60.000 22.18 17.46 41.60 4.06
2479 4819 1.509644 CGATCGGCCATGGTTCCATG 61.510 60.000 21.03 21.03 42.32 3.66
2480 4820 1.227943 CGATCGGCCATGGTTCCAT 60.228 57.895 14.67 0.14 0.00 3.41
2490 4830 2.107141 CTTGGAGGTCGATCGGCC 59.893 66.667 31.20 31.20 40.91 6.13
2508 4848 5.686841 CAGATTGAAGAGAGCGAGATAGTTG 59.313 44.000 0.00 0.00 0.00 3.16
2511 4851 5.214417 CACAGATTGAAGAGAGCGAGATAG 58.786 45.833 0.00 0.00 0.00 2.08
2515 4855 2.094286 ACCACAGATTGAAGAGAGCGAG 60.094 50.000 0.00 0.00 0.00 5.03
2516 4856 1.895798 ACCACAGATTGAAGAGAGCGA 59.104 47.619 0.00 0.00 0.00 4.93
2518 4858 3.325293 TCACCACAGATTGAAGAGAGC 57.675 47.619 0.00 0.00 0.00 4.09
2530 4870 2.743664 TCATTCGCATTCTTCACCACAG 59.256 45.455 0.00 0.00 0.00 3.66
2585 4925 4.704833 GCCTCCAGCCGCTTCACA 62.705 66.667 0.00 0.00 34.35 3.58
2651 4991 8.289939 AGATAACATACTTCTTTACGGAGTCA 57.710 34.615 0.00 0.00 43.93 3.41
2755 5136 8.946085 CGCCCAATTAGTAATCATATACACAAT 58.054 33.333 0.00 0.00 0.00 2.71
2856 5237 2.295349 ACGAAGCACGAGAGACCTTTAA 59.705 45.455 10.05 0.00 45.77 1.52
2929 5310 3.522553 CCCTCGACTAAAGTCCAATCAC 58.477 50.000 4.58 0.00 41.86 3.06
2936 5317 1.518792 GCGGCCCTCGACTAAAGTC 60.519 63.158 0.00 0.00 42.43 3.01
2960 5341 0.179043 TCACGGCACCAACAAAGCTA 60.179 50.000 0.00 0.00 0.00 3.32
3104 5493 8.466798 TGGAGAAGTAAAAGACAAAAGAAAAGG 58.533 33.333 0.00 0.00 0.00 3.11
3227 5619 2.226330 ACGGTGCATGCAAGTAAGAAA 58.774 42.857 24.58 0.00 0.00 2.52
3228 5620 1.890876 ACGGTGCATGCAAGTAAGAA 58.109 45.000 24.58 0.00 0.00 2.52
3258 5653 0.916358 AGGCATGCAGGTAAGACCCT 60.916 55.000 21.36 0.00 39.75 4.34
3260 5655 1.806623 CGTAGGCATGCAGGTAAGACC 60.807 57.143 21.36 0.00 38.99 3.85
3262 5657 1.191535 ACGTAGGCATGCAGGTAAGA 58.808 50.000 21.36 0.00 0.00 2.10
3263 5658 2.159156 TGTACGTAGGCATGCAGGTAAG 60.159 50.000 21.36 11.96 0.00 2.34
3264 5659 1.826096 TGTACGTAGGCATGCAGGTAA 59.174 47.619 21.36 4.76 0.00 2.85
3265 5660 1.407618 CTGTACGTAGGCATGCAGGTA 59.592 52.381 21.36 12.79 0.00 3.08
3267 5662 0.459899 TCTGTACGTAGGCATGCAGG 59.540 55.000 21.36 8.12 0.00 4.85
3280 5686 1.860950 CATGCATACGCTGGTCTGTAC 59.139 52.381 0.00 0.00 39.64 2.90
3291 5697 6.294363 CGAGCATTATATATGCATGCATACG 58.706 40.000 36.22 27.17 46.77 3.06
3358 5835 1.817099 GCACGCAGAAGATGGGGAG 60.817 63.158 0.00 0.00 45.85 4.30
3380 5857 2.361757 TGAGTTGGTTGTTCATGCAAGG 59.638 45.455 0.00 0.00 0.00 3.61
3428 5905 2.546114 AATAGTCGGCCAAACCCCCG 62.546 60.000 2.24 0.00 45.64 5.73
3439 5916 5.978322 GCCAGTAGAGAAGTTTAATAGTCGG 59.022 44.000 0.00 0.00 0.00 4.79
3440 5917 6.797454 AGCCAGTAGAGAAGTTTAATAGTCG 58.203 40.000 0.00 0.00 0.00 4.18
3441 5918 9.738832 CTTAGCCAGTAGAGAAGTTTAATAGTC 57.261 37.037 0.00 0.00 0.00 2.59
3442 5919 9.257428 ACTTAGCCAGTAGAGAAGTTTAATAGT 57.743 33.333 0.00 0.00 31.97 2.12
3453 5930 6.605471 TGAATGAAACTTAGCCAGTAGAGA 57.395 37.500 0.00 0.00 32.94 3.10
3454 5931 7.672983 TTTGAATGAAACTTAGCCAGTAGAG 57.327 36.000 0.00 0.00 32.94 2.43
3455 5932 9.733556 TTATTTGAATGAAACTTAGCCAGTAGA 57.266 29.630 0.00 0.00 32.94 2.59
3489 5966 6.151144 ACAAACTTCTTTCAACTTGCAGTAGT 59.849 34.615 0.00 0.00 0.00 2.73
3493 5970 6.710692 AAACAAACTTCTTTCAACTTGCAG 57.289 33.333 0.00 0.00 0.00 4.41
3498 5975 7.671495 AATGCAAAACAAACTTCTTTCAACT 57.329 28.000 0.00 0.00 0.00 3.16
3504 5981 7.114670 GCAAACAAAATGCAAAACAAACTTCTT 59.885 29.630 0.00 0.00 43.29 2.52
3514 5991 1.267732 CCGCGCAAACAAAATGCAAAA 60.268 42.857 8.75 0.00 44.01 2.44
3518 5995 0.382880 CAACCGCGCAAACAAAATGC 60.383 50.000 8.75 0.00 40.41 3.56
3523 6000 0.388649 AAACACAACCGCGCAAACAA 60.389 45.000 8.75 0.00 0.00 2.83
3534 6011 9.567848 TTAAAGATCTTGTCAGAAAAACACAAC 57.432 29.630 9.17 0.00 30.76 3.32
3591 6074 6.815089 AGCATGGTGATTTAGTTGTCAAAAA 58.185 32.000 0.00 0.00 0.00 1.94
3713 6226 4.523943 AGTTTGATACACATTGGCACACAT 59.476 37.500 0.00 0.00 39.29 3.21
3719 6232 6.199937 AGAATCAGTTTGATACACATTGGC 57.800 37.500 0.00 0.00 35.76 4.52
3817 6357 3.951680 ACTTCCGAAACATGGTGAAAACT 59.048 39.130 0.00 0.00 0.00 2.66
3818 6358 4.301637 ACTTCCGAAACATGGTGAAAAC 57.698 40.909 0.00 0.00 0.00 2.43
3822 6362 6.642707 AATTTAACTTCCGAAACATGGTGA 57.357 33.333 0.00 0.00 0.00 4.02
3867 6407 6.713762 ACTTTGAAATGAGACCATGTTTGA 57.286 33.333 0.00 0.00 32.36 2.69
3868 6408 7.205297 AGAACTTTGAAATGAGACCATGTTTG 58.795 34.615 0.00 0.00 32.36 2.93
3872 6412 6.564709 TGAGAACTTTGAAATGAGACCATG 57.435 37.500 0.00 0.00 32.36 3.66
3873 6413 6.093219 CGATGAGAACTTTGAAATGAGACCAT 59.907 38.462 0.00 0.00 33.66 3.55
3874 6414 5.409520 CGATGAGAACTTTGAAATGAGACCA 59.590 40.000 0.00 0.00 0.00 4.02
3876 6416 6.146184 TGACGATGAGAACTTTGAAATGAGAC 59.854 38.462 0.00 0.00 0.00 3.36
3877 6417 6.223120 TGACGATGAGAACTTTGAAATGAGA 58.777 36.000 0.00 0.00 0.00 3.27
3878 6418 6.471976 TGACGATGAGAACTTTGAAATGAG 57.528 37.500 0.00 0.00 0.00 2.90
3880 6420 7.912949 TTTTGACGATGAGAACTTTGAAATG 57.087 32.000 0.00 0.00 0.00 2.32
3881 6421 7.973388 TGTTTTTGACGATGAGAACTTTGAAAT 59.027 29.630 0.00 0.00 0.00 2.17
3882 6422 7.272515 GTGTTTTTGACGATGAGAACTTTGAAA 59.727 33.333 0.00 0.00 0.00 2.69
3889 6429 8.629986 CATATTTGTGTTTTTGACGATGAGAAC 58.370 33.333 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.