Multiple sequence alignment - TraesCS3D01G082500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G082500 chr3D 100.000 2663 0 0 1 2663 41747641 41744979 0.000000e+00 4918.0
1 TraesCS3D01G082500 chr3D 86.688 308 29 10 287 584 170179226 170179531 5.490000e-87 331.0
2 TraesCS3D01G082500 chr3D 82.320 181 28 4 2085 2262 39532548 39532369 1.280000e-33 154.0
3 TraesCS3D01G082500 chr3D 80.714 140 25 2 2063 2200 475120399 475120260 1.010000e-19 108.0
4 TraesCS3D01G082500 chr3B 90.269 1151 65 20 823 1964 65269633 65268521 0.000000e+00 1461.0
5 TraesCS3D01G082500 chr3B 92.115 520 34 5 2146 2663 65241110 65240596 0.000000e+00 726.0
6 TraesCS3D01G082500 chr3B 91.878 197 14 2 1958 2152 65267796 65267600 9.390000e-70 274.0
7 TraesCS3D01G082500 chr3A 94.796 884 29 8 823 1691 53257523 53256642 0.000000e+00 1362.0
8 TraesCS3D01G082500 chr3A 90.939 927 56 8 1744 2663 53256634 53255729 0.000000e+00 1221.0
9 TraesCS3D01G082500 chr3A 84.416 308 36 10 287 584 207778358 207778663 2.590000e-75 292.0
10 TraesCS3D01G082500 chr3A 93.023 86 5 1 273 357 40154415 40154330 1.000000e-24 124.0
11 TraesCS3D01G082500 chr2B 90.680 676 59 3 993 1666 705348858 705348185 0.000000e+00 896.0
12 TraesCS3D01G082500 chr2B 88.726 683 73 4 986 1666 705357415 705358095 0.000000e+00 832.0
13 TraesCS3D01G082500 chr2B 84.749 577 71 10 119 683 574659256 574659827 1.790000e-156 562.0
14 TraesCS3D01G082500 chr2B 87.640 89 11 0 273 361 778922448 778922360 1.300000e-18 104.0
15 TraesCS3D01G082500 chr2A 90.519 675 58 5 993 1664 718965666 718964995 0.000000e+00 887.0
16 TraesCS3D01G082500 chr2A 89.270 671 70 2 997 1666 718975861 718976530 0.000000e+00 839.0
17 TraesCS3D01G082500 chr2D 89.808 677 63 5 993 1666 584858573 584857900 0.000000e+00 863.0
18 TraesCS3D01G082500 chr2D 89.150 682 69 5 986 1664 584867298 584867977 0.000000e+00 845.0
19 TraesCS3D01G082500 chr2D 99.187 123 1 0 1 123 57765029 57765151 3.450000e-54 222.0
20 TraesCS3D01G082500 chr2D 100.000 120 0 0 1 120 585583961 585584080 3.450000e-54 222.0
21 TraesCS3D01G082500 chr2D 99.180 122 1 0 1 122 44786425 44786546 1.240000e-53 220.0
22 TraesCS3D01G082500 chr2D 98.400 125 1 1 1 125 88429793 88429916 4.460000e-53 219.0
23 TraesCS3D01G082500 chr7D 83.709 577 58 16 119 677 167740332 167740890 1.830000e-141 512.0
24 TraesCS3D01G082500 chr7D 100.000 120 0 0 1 120 95582745 95582626 3.450000e-54 222.0
25 TraesCS3D01G082500 chr7D 79.599 299 44 8 408 694 558978088 558977795 5.810000e-47 198.0
26 TraesCS3D01G082500 chr7D 78.758 306 44 15 409 696 558978411 558978109 4.530000e-43 185.0
27 TraesCS3D01G082500 chr7D 74.121 398 64 25 1895 2270 392641771 392642151 7.740000e-26 128.0
28 TraesCS3D01G082500 chr7D 91.667 84 7 0 273 356 558978491 558978408 1.670000e-22 117.0
29 TraesCS3D01G082500 chr7D 79.394 165 19 7 2099 2253 282876453 282876612 4.690000e-18 102.0
30 TraesCS3D01G082500 chrUn 83.696 552 66 15 1133 1666 49875913 49875368 1.420000e-137 499.0
31 TraesCS3D01G082500 chrUn 100.000 119 0 0 1 119 131982848 131982966 1.240000e-53 220.0
32 TraesCS3D01G082500 chr6D 99.180 122 1 0 1 122 80927257 80927378 1.240000e-53 220.0
33 TraesCS3D01G082500 chr6D 76.677 313 50 18 1967 2270 413351899 413352197 4.590000e-33 152.0
34 TraesCS3D01G082500 chr6D 74.653 288 50 14 1972 2245 457750187 457750465 3.630000e-19 106.0
35 TraesCS3D01G082500 chr1D 96.970 132 3 1 1 132 89150333 89150203 1.240000e-53 220.0
36 TraesCS3D01G082500 chr1D 78.030 264 39 14 408 658 68150235 68150492 5.940000e-32 148.0
37 TraesCS3D01G082500 chr1D 80.795 151 26 3 2099 2246 156123362 156123212 6.020000e-22 115.0
38 TraesCS3D01G082500 chr4D 98.387 124 2 0 1 124 268752905 268752782 4.460000e-53 219.0
39 TraesCS3D01G082500 chr1B 80.579 242 30 14 412 640 600485595 600485832 1.270000e-38 171.0
40 TraesCS3D01G082500 chr1B 74.899 247 47 10 2026 2270 4789682 4789449 6.070000e-17 99.0
41 TraesCS3D01G082500 chr7A 77.642 246 35 12 412 640 37085555 37085313 5.980000e-27 132.0
42 TraesCS3D01G082500 chr7A 78.736 174 22 7 2099 2262 314412988 314412820 4.690000e-18 102.0
43 TraesCS3D01G082500 chr5A 80.000 100 16 4 1983 2079 547335757 547335659 1.320000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G082500 chr3D 41744979 41747641 2662 True 4918.0 4918 100.0000 1 2663 1 chr3D.!!$R2 2662
1 TraesCS3D01G082500 chr3B 65267600 65269633 2033 True 867.5 1461 91.0735 823 2152 2 chr3B.!!$R2 1329
2 TraesCS3D01G082500 chr3B 65240596 65241110 514 True 726.0 726 92.1150 2146 2663 1 chr3B.!!$R1 517
3 TraesCS3D01G082500 chr3A 53255729 53257523 1794 True 1291.5 1362 92.8675 823 2663 2 chr3A.!!$R2 1840
4 TraesCS3D01G082500 chr2B 705348185 705348858 673 True 896.0 896 90.6800 993 1666 1 chr2B.!!$R1 673
5 TraesCS3D01G082500 chr2B 705357415 705358095 680 False 832.0 832 88.7260 986 1666 1 chr2B.!!$F2 680
6 TraesCS3D01G082500 chr2B 574659256 574659827 571 False 562.0 562 84.7490 119 683 1 chr2B.!!$F1 564
7 TraesCS3D01G082500 chr2A 718964995 718965666 671 True 887.0 887 90.5190 993 1664 1 chr2A.!!$R1 671
8 TraesCS3D01G082500 chr2A 718975861 718976530 669 False 839.0 839 89.2700 997 1666 1 chr2A.!!$F1 669
9 TraesCS3D01G082500 chr2D 584857900 584858573 673 True 863.0 863 89.8080 993 1666 1 chr2D.!!$R1 673
10 TraesCS3D01G082500 chr2D 584867298 584867977 679 False 845.0 845 89.1500 986 1664 1 chr2D.!!$F4 678
11 TraesCS3D01G082500 chr7D 167740332 167740890 558 False 512.0 512 83.7090 119 677 1 chr7D.!!$F1 558
12 TraesCS3D01G082500 chrUn 49875368 49875913 545 True 499.0 499 83.6960 1133 1666 1 chrUn.!!$R1 533

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
758 759 0.036306 CGCCCTATCCCCATAACACC 59.964 60.0 0.0 0.0 0.0 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1829 1872 0.261696 ACAGTGAAAAGCAACCCCCT 59.738 50.0 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 6.548441 TGGTGCGCCATTAGTAAAATATAC 57.452 37.500 16.89 0.00 40.46 1.47
33 34 6.292923 TGGTGCGCCATTAGTAAAATATACT 58.707 36.000 16.89 0.00 40.46 2.12
34 35 7.443477 TGGTGCGCCATTAGTAAAATATACTA 58.557 34.615 16.89 0.00 40.46 1.82
35 36 7.932491 TGGTGCGCCATTAGTAAAATATACTAA 59.068 33.333 16.89 9.72 42.18 2.24
36 37 8.943002 GGTGCGCCATTAGTAAAATATACTAAT 58.057 33.333 12.58 12.73 46.06 1.73
44 45 9.720769 ATTAGTAAAATATACTAATGGCGTGCT 57.279 29.630 16.17 0.00 44.47 4.40
46 47 8.530269 AGTAAAATATACTAATGGCGTGCTAC 57.470 34.615 0.00 0.00 0.00 3.58
47 48 8.365647 AGTAAAATATACTAATGGCGTGCTACT 58.634 33.333 0.00 0.00 0.00 2.57
48 49 9.630098 GTAAAATATACTAATGGCGTGCTACTA 57.370 33.333 0.00 0.00 0.00 1.82
50 51 9.720769 AAAATATACTAATGGCGTGCTACTAAT 57.279 29.630 0.00 0.00 0.00 1.73
51 52 8.703604 AATATACTAATGGCGTGCTACTAATG 57.296 34.615 0.00 0.00 0.00 1.90
52 53 3.728845 ACTAATGGCGTGCTACTAATGG 58.271 45.455 0.00 0.00 0.00 3.16
53 54 1.308998 AATGGCGTGCTACTAATGGC 58.691 50.000 0.00 0.00 0.00 4.40
54 55 0.880278 ATGGCGTGCTACTAATGGCG 60.880 55.000 0.00 0.00 34.35 5.69
55 56 2.626455 GCGTGCTACTAATGGCGC 59.374 61.111 0.00 0.00 39.31 6.53
56 57 2.171079 GCGTGCTACTAATGGCGCA 61.171 57.895 10.83 0.00 42.60 6.09
57 58 1.636340 CGTGCTACTAATGGCGCAC 59.364 57.895 10.83 0.00 46.74 5.34
58 59 2.014594 GTGCTACTAATGGCGCACC 58.985 57.895 10.83 0.00 45.08 5.01
71 72 3.136123 GCACCACTGATGCGCCAT 61.136 61.111 4.18 0.00 32.45 4.40
72 73 2.703798 GCACCACTGATGCGCCATT 61.704 57.895 4.18 0.00 32.45 3.16
73 74 1.375853 GCACCACTGATGCGCCATTA 61.376 55.000 4.18 0.00 32.45 1.90
74 75 1.093972 CACCACTGATGCGCCATTAA 58.906 50.000 4.18 0.00 0.00 1.40
75 76 1.677576 CACCACTGATGCGCCATTAAT 59.322 47.619 4.18 0.00 0.00 1.40
76 77 1.677576 ACCACTGATGCGCCATTAATG 59.322 47.619 4.18 8.58 0.00 1.90
90 91 3.256631 CCATTAATGGCCAGATTAGGTGC 59.743 47.826 21.32 0.00 41.75 5.01
91 92 2.254546 TAATGGCCAGATTAGGTGCG 57.745 50.000 13.05 0.00 0.00 5.34
92 93 1.103398 AATGGCCAGATTAGGTGCGC 61.103 55.000 13.05 0.00 0.00 6.09
93 94 2.902343 GGCCAGATTAGGTGCGCC 60.902 66.667 8.71 8.71 0.00 6.53
94 95 2.124736 GCCAGATTAGGTGCGCCA 60.125 61.111 20.59 0.00 37.19 5.69
95 96 1.526917 GCCAGATTAGGTGCGCCAT 60.527 57.895 20.59 3.52 37.19 4.40
96 97 1.103398 GCCAGATTAGGTGCGCCATT 61.103 55.000 20.59 0.20 37.19 3.16
97 98 1.813862 GCCAGATTAGGTGCGCCATTA 60.814 52.381 20.59 3.01 37.19 1.90
98 99 2.146342 CCAGATTAGGTGCGCCATTAG 58.854 52.381 20.59 2.79 37.19 1.73
99 100 2.485479 CCAGATTAGGTGCGCCATTAGT 60.485 50.000 20.59 0.00 37.19 2.24
100 101 3.244078 CCAGATTAGGTGCGCCATTAGTA 60.244 47.826 20.59 0.00 37.19 1.82
101 102 3.990469 CAGATTAGGTGCGCCATTAGTAG 59.010 47.826 20.59 0.00 37.19 2.57
102 103 2.234300 TTAGGTGCGCCATTAGTAGC 57.766 50.000 20.59 0.00 37.19 3.58
103 104 0.391597 TAGGTGCGCCATTAGTAGCC 59.608 55.000 20.59 0.00 37.19 3.93
104 105 1.892391 GGTGCGCCATTAGTAGCCC 60.892 63.158 12.58 0.00 34.09 5.19
105 106 1.146263 GTGCGCCATTAGTAGCCCT 59.854 57.895 4.18 0.00 0.00 5.19
106 107 0.463833 GTGCGCCATTAGTAGCCCTT 60.464 55.000 4.18 0.00 0.00 3.95
107 108 0.254747 TGCGCCATTAGTAGCCCTTT 59.745 50.000 4.18 0.00 0.00 3.11
108 109 1.340600 TGCGCCATTAGTAGCCCTTTT 60.341 47.619 4.18 0.00 0.00 2.27
109 110 1.749063 GCGCCATTAGTAGCCCTTTTT 59.251 47.619 0.00 0.00 0.00 1.94
110 111 2.223502 GCGCCATTAGTAGCCCTTTTTC 60.224 50.000 0.00 0.00 0.00 2.29
111 112 3.279434 CGCCATTAGTAGCCCTTTTTCT 58.721 45.455 0.00 0.00 0.00 2.52
112 113 4.448210 CGCCATTAGTAGCCCTTTTTCTA 58.552 43.478 0.00 0.00 0.00 2.10
113 114 4.511826 CGCCATTAGTAGCCCTTTTTCTAG 59.488 45.833 0.00 0.00 0.00 2.43
114 115 5.437946 GCCATTAGTAGCCCTTTTTCTAGT 58.562 41.667 0.00 0.00 0.00 2.57
115 116 6.589135 GCCATTAGTAGCCCTTTTTCTAGTA 58.411 40.000 0.00 0.00 0.00 1.82
116 117 6.706716 GCCATTAGTAGCCCTTTTTCTAGTAG 59.293 42.308 0.00 0.00 0.00 2.57
117 118 7.635309 GCCATTAGTAGCCCTTTTTCTAGTAGT 60.635 40.741 0.00 0.00 0.00 2.73
129 130 6.697641 TTTTCTAGTAGTGGGACAAAGGAT 57.302 37.500 0.00 0.00 44.16 3.24
130 131 5.934402 TTCTAGTAGTGGGACAAAGGATC 57.066 43.478 0.00 0.00 44.16 3.36
132 133 2.915869 AGTAGTGGGACAAAGGATCCA 58.084 47.619 15.82 0.00 44.16 3.41
133 134 3.464828 AGTAGTGGGACAAAGGATCCAT 58.535 45.455 15.82 0.00 44.16 3.41
134 135 2.814805 AGTGGGACAAAGGATCCATG 57.185 50.000 15.82 14.88 44.16 3.66
135 136 1.995542 AGTGGGACAAAGGATCCATGT 59.004 47.619 19.74 19.74 44.16 3.21
136 137 2.094675 GTGGGACAAAGGATCCATGTG 58.905 52.381 23.38 15.61 44.16 3.21
137 138 1.106285 GGGACAAAGGATCCATGTGC 58.894 55.000 24.80 24.80 38.06 4.57
139 140 1.747355 GGACAAAGGATCCATGTGCTG 59.253 52.381 25.23 9.24 36.15 4.41
154 155 4.087892 CTGGAGGAGCCGGTGGTG 62.088 72.222 1.90 0.00 40.66 4.17
181 182 2.597217 CCGGAAACTGGGCAGCAA 60.597 61.111 0.00 0.00 0.00 3.91
182 183 2.629656 CCGGAAACTGGGCAGCAAG 61.630 63.158 0.00 0.00 0.00 4.01
183 184 2.653115 GGAAACTGGGCAGCAAGC 59.347 61.111 0.00 0.00 44.65 4.01
260 261 3.142838 CCAGCGGCATGGGAAAGG 61.143 66.667 1.45 0.00 36.64 3.11
261 262 3.830192 CAGCGGCATGGGAAAGGC 61.830 66.667 1.45 0.00 33.84 4.35
262 263 4.365111 AGCGGCATGGGAAAGGCA 62.365 61.111 1.45 0.00 37.29 4.75
263 264 3.830192 GCGGCATGGGAAAGGCAG 61.830 66.667 0.00 0.00 37.29 4.85
264 265 3.142838 CGGCATGGGAAAGGCAGG 61.143 66.667 0.00 0.00 37.29 4.85
265 266 2.360191 GGCATGGGAAAGGCAGGA 59.640 61.111 0.00 0.00 37.29 3.86
266 267 1.305213 GGCATGGGAAAGGCAGGAA 60.305 57.895 0.00 0.00 37.29 3.36
267 268 1.325476 GGCATGGGAAAGGCAGGAAG 61.325 60.000 0.00 0.00 37.29 3.46
268 269 0.613012 GCATGGGAAAGGCAGGAAGT 60.613 55.000 0.00 0.00 35.05 3.01
269 270 1.340991 GCATGGGAAAGGCAGGAAGTA 60.341 52.381 0.00 0.00 35.05 2.24
270 271 2.648059 CATGGGAAAGGCAGGAAGTAG 58.352 52.381 0.00 0.00 0.00 2.57
271 272 2.038863 TGGGAAAGGCAGGAAGTAGA 57.961 50.000 0.00 0.00 0.00 2.59
272 273 2.344592 TGGGAAAGGCAGGAAGTAGAA 58.655 47.619 0.00 0.00 0.00 2.10
273 274 2.039879 TGGGAAAGGCAGGAAGTAGAAC 59.960 50.000 0.00 0.00 0.00 3.01
274 275 2.039879 GGGAAAGGCAGGAAGTAGAACA 59.960 50.000 0.00 0.00 0.00 3.18
275 276 3.497942 GGGAAAGGCAGGAAGTAGAACAA 60.498 47.826 0.00 0.00 0.00 2.83
276 277 4.336280 GGAAAGGCAGGAAGTAGAACAAT 58.664 43.478 0.00 0.00 0.00 2.71
277 278 5.497474 GGAAAGGCAGGAAGTAGAACAATA 58.503 41.667 0.00 0.00 0.00 1.90
278 279 5.944007 GGAAAGGCAGGAAGTAGAACAATAA 59.056 40.000 0.00 0.00 0.00 1.40
279 280 6.433093 GGAAAGGCAGGAAGTAGAACAATAAA 59.567 38.462 0.00 0.00 0.00 1.40
280 281 7.362142 GGAAAGGCAGGAAGTAGAACAATAAAG 60.362 40.741 0.00 0.00 0.00 1.85
281 282 6.374417 AGGCAGGAAGTAGAACAATAAAGA 57.626 37.500 0.00 0.00 0.00 2.52
282 283 6.963322 AGGCAGGAAGTAGAACAATAAAGAT 58.037 36.000 0.00 0.00 0.00 2.40
283 284 7.406104 AGGCAGGAAGTAGAACAATAAAGATT 58.594 34.615 0.00 0.00 0.00 2.40
284 285 7.554476 AGGCAGGAAGTAGAACAATAAAGATTC 59.446 37.037 0.00 0.00 0.00 2.52
285 286 7.402640 GCAGGAAGTAGAACAATAAAGATTCG 58.597 38.462 0.00 0.00 0.00 3.34
286 287 7.466050 GCAGGAAGTAGAACAATAAAGATTCGG 60.466 40.741 0.00 0.00 0.00 4.30
287 288 7.764443 CAGGAAGTAGAACAATAAAGATTCGGA 59.236 37.037 0.00 0.00 0.00 4.55
288 289 7.982354 AGGAAGTAGAACAATAAAGATTCGGAG 59.018 37.037 0.00 0.00 0.00 4.63
289 290 7.980099 GGAAGTAGAACAATAAAGATTCGGAGA 59.020 37.037 0.00 0.00 0.00 3.71
290 291 9.535878 GAAGTAGAACAATAAAGATTCGGAGAT 57.464 33.333 0.00 0.00 35.04 2.75
291 292 9.892130 AAGTAGAACAATAAAGATTCGGAGATT 57.108 29.630 0.00 0.00 35.04 2.40
292 293 9.319143 AGTAGAACAATAAAGATTCGGAGATTG 57.681 33.333 0.00 0.00 35.04 2.67
293 294 9.314321 GTAGAACAATAAAGATTCGGAGATTGA 57.686 33.333 0.00 0.00 35.04 2.57
294 295 8.792830 AGAACAATAAAGATTCGGAGATTGAA 57.207 30.769 0.00 0.00 35.04 2.69
295 296 9.401058 AGAACAATAAAGATTCGGAGATTGAAT 57.599 29.630 0.00 0.00 38.71 2.57
296 297 9.443283 GAACAATAAAGATTCGGAGATTGAATG 57.557 33.333 0.00 0.00 36.24 2.67
297 298 7.934457 ACAATAAAGATTCGGAGATTGAATGG 58.066 34.615 0.00 0.00 36.24 3.16
298 299 7.013655 ACAATAAAGATTCGGAGATTGAATGGG 59.986 37.037 0.00 0.00 36.24 4.00
299 300 4.778213 AAGATTCGGAGATTGAATGGGA 57.222 40.909 0.00 0.00 36.24 4.37
300 301 4.778213 AGATTCGGAGATTGAATGGGAA 57.222 40.909 0.00 0.00 36.24 3.97
301 302 4.712476 AGATTCGGAGATTGAATGGGAAG 58.288 43.478 0.00 0.00 36.24 3.46
302 303 4.410228 AGATTCGGAGATTGAATGGGAAGA 59.590 41.667 0.00 0.00 36.24 2.87
303 304 4.568072 TTCGGAGATTGAATGGGAAGAA 57.432 40.909 0.00 0.00 35.04 2.52
304 305 4.778213 TCGGAGATTGAATGGGAAGAAT 57.222 40.909 0.00 0.00 0.00 2.40
305 306 5.116084 TCGGAGATTGAATGGGAAGAATT 57.884 39.130 0.00 0.00 0.00 2.17
306 307 4.883585 TCGGAGATTGAATGGGAAGAATTG 59.116 41.667 0.00 0.00 0.00 2.32
307 308 4.037208 CGGAGATTGAATGGGAAGAATTGG 59.963 45.833 0.00 0.00 0.00 3.16
308 309 5.203528 GGAGATTGAATGGGAAGAATTGGA 58.796 41.667 0.00 0.00 0.00 3.53
309 310 5.301298 GGAGATTGAATGGGAAGAATTGGAG 59.699 44.000 0.00 0.00 0.00 3.86
310 311 6.083487 AGATTGAATGGGAAGAATTGGAGA 57.917 37.500 0.00 0.00 0.00 3.71
311 312 6.496743 AGATTGAATGGGAAGAATTGGAGAA 58.503 36.000 0.00 0.00 0.00 2.87
312 313 6.606395 AGATTGAATGGGAAGAATTGGAGAAG 59.394 38.462 0.00 0.00 0.00 2.85
313 314 5.519183 TGAATGGGAAGAATTGGAGAAGA 57.481 39.130 0.00 0.00 0.00 2.87
314 315 5.891198 TGAATGGGAAGAATTGGAGAAGAA 58.109 37.500 0.00 0.00 0.00 2.52
315 316 6.314120 TGAATGGGAAGAATTGGAGAAGAAA 58.686 36.000 0.00 0.00 0.00 2.52
316 317 6.782000 TGAATGGGAAGAATTGGAGAAGAAAA 59.218 34.615 0.00 0.00 0.00 2.29
317 318 6.847421 ATGGGAAGAATTGGAGAAGAAAAG 57.153 37.500 0.00 0.00 0.00 2.27
318 319 5.079643 TGGGAAGAATTGGAGAAGAAAAGG 58.920 41.667 0.00 0.00 0.00 3.11
319 320 5.080337 GGGAAGAATTGGAGAAGAAAAGGT 58.920 41.667 0.00 0.00 0.00 3.50
320 321 6.183361 TGGGAAGAATTGGAGAAGAAAAGGTA 60.183 38.462 0.00 0.00 0.00 3.08
321 322 6.719829 GGGAAGAATTGGAGAAGAAAAGGTAA 59.280 38.462 0.00 0.00 0.00 2.85
322 323 7.094162 GGGAAGAATTGGAGAAGAAAAGGTAAG 60.094 40.741 0.00 0.00 0.00 2.34
323 324 7.448777 GGAAGAATTGGAGAAGAAAAGGTAAGT 59.551 37.037 0.00 0.00 0.00 2.24
324 325 7.987750 AGAATTGGAGAAGAAAAGGTAAGTC 57.012 36.000 0.00 0.00 0.00 3.01
325 326 7.518188 AGAATTGGAGAAGAAAAGGTAAGTCA 58.482 34.615 0.00 0.00 0.00 3.41
326 327 8.166726 AGAATTGGAGAAGAAAAGGTAAGTCAT 58.833 33.333 0.00 0.00 0.00 3.06
327 328 7.693969 ATTGGAGAAGAAAAGGTAAGTCATG 57.306 36.000 0.00 0.00 0.00 3.07
328 329 6.433847 TGGAGAAGAAAAGGTAAGTCATGA 57.566 37.500 0.00 0.00 0.00 3.07
329 330 7.020827 TGGAGAAGAAAAGGTAAGTCATGAT 57.979 36.000 0.00 0.00 0.00 2.45
330 331 7.461749 TGGAGAAGAAAAGGTAAGTCATGATT 58.538 34.615 0.00 0.00 0.00 2.57
331 332 7.607991 TGGAGAAGAAAAGGTAAGTCATGATTC 59.392 37.037 0.00 0.00 0.00 2.52
332 333 7.826744 GGAGAAGAAAAGGTAAGTCATGATTCT 59.173 37.037 0.00 0.00 0.00 2.40
333 334 9.225436 GAGAAGAAAAGGTAAGTCATGATTCTT 57.775 33.333 13.72 13.72 38.26 2.52
334 335 9.579932 AGAAGAAAAGGTAAGTCATGATTCTTT 57.420 29.630 14.59 7.52 36.37 2.52
337 338 9.354673 AGAAAAGGTAAGTCATGATTCTTTTCA 57.645 29.630 27.10 5.27 44.97 2.69
342 343 9.965902 AGGTAAGTCATGATTCTTTTCATAACT 57.034 29.630 0.00 0.00 36.36 2.24
343 344 9.994432 GGTAAGTCATGATTCTTTTCATAACTG 57.006 33.333 0.00 0.00 35.26 3.16
346 347 9.903682 AAGTCATGATTCTTTTCATAACTGTTG 57.096 29.630 0.00 0.00 35.26 3.33
347 348 9.288576 AGTCATGATTCTTTTCATAACTGTTGA 57.711 29.630 0.00 0.00 34.06 3.18
351 352 9.865321 ATGATTCTTTTCATAACTGTTGATTGG 57.135 29.630 2.69 0.00 34.59 3.16
352 353 8.859090 TGATTCTTTTCATAACTGTTGATTGGT 58.141 29.630 2.69 0.00 0.00 3.67
353 354 9.696917 GATTCTTTTCATAACTGTTGATTGGTT 57.303 29.630 2.69 0.00 0.00 3.67
355 356 9.883142 TTCTTTTCATAACTGTTGATTGGTTTT 57.117 25.926 2.69 0.00 0.00 2.43
356 357 9.883142 TCTTTTCATAACTGTTGATTGGTTTTT 57.117 25.926 2.69 0.00 0.00 1.94
364 365 8.661352 AACTGTTGATTGGTTTTTATTTGGAG 57.339 30.769 0.00 0.00 0.00 3.86
365 366 8.017418 ACTGTTGATTGGTTTTTATTTGGAGA 57.983 30.769 0.00 0.00 0.00 3.71
366 367 8.482128 ACTGTTGATTGGTTTTTATTTGGAGAA 58.518 29.630 0.00 0.00 0.00 2.87
367 368 8.885494 TGTTGATTGGTTTTTATTTGGAGAAG 57.115 30.769 0.00 0.00 0.00 2.85
368 369 7.930865 TGTTGATTGGTTTTTATTTGGAGAAGG 59.069 33.333 0.00 0.00 0.00 3.46
369 370 7.847711 TGATTGGTTTTTATTTGGAGAAGGA 57.152 32.000 0.00 0.00 0.00 3.36
370 371 8.256356 TGATTGGTTTTTATTTGGAGAAGGAA 57.744 30.769 0.00 0.00 0.00 3.36
371 372 8.367156 TGATTGGTTTTTATTTGGAGAAGGAAG 58.633 33.333 0.00 0.00 0.00 3.46
372 373 6.664428 TGGTTTTTATTTGGAGAAGGAAGG 57.336 37.500 0.00 0.00 0.00 3.46
373 374 6.140377 TGGTTTTTATTTGGAGAAGGAAGGT 58.860 36.000 0.00 0.00 0.00 3.50
374 375 6.613679 TGGTTTTTATTTGGAGAAGGAAGGTT 59.386 34.615 0.00 0.00 0.00 3.50
375 376 7.126573 TGGTTTTTATTTGGAGAAGGAAGGTTT 59.873 33.333 0.00 0.00 0.00 3.27
376 377 8.644216 GGTTTTTATTTGGAGAAGGAAGGTTTA 58.356 33.333 0.00 0.00 0.00 2.01
377 378 9.692749 GTTTTTATTTGGAGAAGGAAGGTTTAG 57.307 33.333 0.00 0.00 0.00 1.85
378 379 9.649316 TTTTTATTTGGAGAAGGAAGGTTTAGA 57.351 29.630 0.00 0.00 0.00 2.10
379 380 9.822727 TTTTATTTGGAGAAGGAAGGTTTAGAT 57.177 29.630 0.00 0.00 0.00 1.98
389 390 9.771140 AGAAGGAAGGTTTAGATATATATCGGT 57.229 33.333 15.48 3.85 37.76 4.69
409 410 8.788325 ATCGGTTAAGTAGCTAATCAGTTTTT 57.212 30.769 0.00 0.00 0.00 1.94
445 446 8.730970 TCCGTTATTTGTTTTCTTAAAATCCG 57.269 30.769 0.00 0.00 32.22 4.18
446 447 8.351461 TCCGTTATTTGTTTTCTTAAAATCCGT 58.649 29.630 0.00 0.00 32.22 4.69
447 448 8.970293 CCGTTATTTGTTTTCTTAAAATCCGTT 58.030 29.630 0.00 0.00 32.22 4.44
485 486 5.866335 GCAAATTGCATTGATGGAAGAAA 57.134 34.783 13.73 0.00 44.26 2.52
486 487 6.431198 GCAAATTGCATTGATGGAAGAAAT 57.569 33.333 13.73 0.00 44.26 2.17
487 488 6.483687 GCAAATTGCATTGATGGAAGAAATC 58.516 36.000 13.73 0.00 44.26 2.17
488 489 6.701937 CAAATTGCATTGATGGAAGAAATCG 58.298 36.000 4.32 0.00 41.40 3.34
489 490 4.374843 TTGCATTGATGGAAGAAATCGG 57.625 40.909 0.00 0.00 33.04 4.18
490 491 3.355378 TGCATTGATGGAAGAAATCGGT 58.645 40.909 0.00 0.00 0.00 4.69
491 492 3.763360 TGCATTGATGGAAGAAATCGGTT 59.237 39.130 0.00 0.00 0.00 4.44
492 493 4.946772 TGCATTGATGGAAGAAATCGGTTA 59.053 37.500 0.00 0.00 0.00 2.85
493 494 5.417266 TGCATTGATGGAAGAAATCGGTTAA 59.583 36.000 0.00 0.00 0.00 2.01
494 495 6.096705 TGCATTGATGGAAGAAATCGGTTAAT 59.903 34.615 0.00 0.00 0.00 1.40
495 496 6.980397 GCATTGATGGAAGAAATCGGTTAATT 59.020 34.615 0.00 0.00 0.00 1.40
496 497 7.492344 GCATTGATGGAAGAAATCGGTTAATTT 59.508 33.333 0.00 0.00 0.00 1.82
499 500 9.456147 TTGATGGAAGAAATCGGTTAATTTAGA 57.544 29.630 0.00 0.00 0.00 2.10
500 501 9.456147 TGATGGAAGAAATCGGTTAATTTAGAA 57.544 29.630 0.00 0.00 0.00 2.10
541 542 6.385649 TTTTGTACCTTAGAAAAGTGCTGG 57.614 37.500 0.00 0.00 0.00 4.85
542 543 4.699925 TGTACCTTAGAAAAGTGCTGGT 57.300 40.909 0.00 0.00 0.00 4.00
543 544 5.043737 TGTACCTTAGAAAAGTGCTGGTT 57.956 39.130 0.00 0.00 0.00 3.67
544 545 5.442391 TGTACCTTAGAAAAGTGCTGGTTT 58.558 37.500 0.00 0.00 0.00 3.27
545 546 6.593807 TGTACCTTAGAAAAGTGCTGGTTTA 58.406 36.000 0.00 0.00 0.00 2.01
546 547 6.484308 TGTACCTTAGAAAAGTGCTGGTTTAC 59.516 38.462 0.00 0.00 0.00 2.01
547 548 5.442391 ACCTTAGAAAAGTGCTGGTTTACA 58.558 37.500 0.00 0.00 0.00 2.41
548 549 5.889289 ACCTTAGAAAAGTGCTGGTTTACAA 59.111 36.000 0.00 0.00 0.00 2.41
549 550 6.378848 ACCTTAGAAAAGTGCTGGTTTACAAA 59.621 34.615 0.00 0.00 0.00 2.83
550 551 6.918022 CCTTAGAAAAGTGCTGGTTTACAAAG 59.082 38.462 0.00 0.00 0.00 2.77
551 552 7.201785 CCTTAGAAAAGTGCTGGTTTACAAAGA 60.202 37.037 0.00 0.00 0.00 2.52
552 553 6.524101 AGAAAAGTGCTGGTTTACAAAGAA 57.476 33.333 0.00 0.00 0.00 2.52
553 554 6.930731 AGAAAAGTGCTGGTTTACAAAGAAA 58.069 32.000 0.00 0.00 0.00 2.52
554 555 7.035612 AGAAAAGTGCTGGTTTACAAAGAAAG 58.964 34.615 0.00 0.00 0.00 2.62
555 556 4.307443 AGTGCTGGTTTACAAAGAAAGC 57.693 40.909 0.00 0.00 37.33 3.51
556 557 3.699038 AGTGCTGGTTTACAAAGAAAGCA 59.301 39.130 0.00 0.00 42.78 3.91
557 558 4.342092 AGTGCTGGTTTACAAAGAAAGCAT 59.658 37.500 0.00 0.00 43.67 3.79
558 559 4.445385 GTGCTGGTTTACAAAGAAAGCATG 59.555 41.667 0.00 0.00 43.67 4.06
559 560 3.989817 GCTGGTTTACAAAGAAAGCATGG 59.010 43.478 0.00 0.00 43.67 3.66
560 561 4.261994 GCTGGTTTACAAAGAAAGCATGGA 60.262 41.667 0.00 0.00 43.67 3.41
561 562 5.452078 TGGTTTACAAAGAAAGCATGGAG 57.548 39.130 0.00 0.00 40.79 3.86
562 563 5.136828 TGGTTTACAAAGAAAGCATGGAGA 58.863 37.500 0.00 0.00 40.79 3.71
563 564 5.596361 TGGTTTACAAAGAAAGCATGGAGAA 59.404 36.000 0.00 0.00 40.79 2.87
564 565 6.152379 GGTTTACAAAGAAAGCATGGAGAAG 58.848 40.000 0.00 0.00 36.91 2.85
565 566 6.016276 GGTTTACAAAGAAAGCATGGAGAAGA 60.016 38.462 0.00 0.00 36.91 2.87
566 567 7.425606 GTTTACAAAGAAAGCATGGAGAAGAA 58.574 34.615 0.00 0.00 0.00 2.52
567 568 7.581213 TTACAAAGAAAGCATGGAGAAGAAA 57.419 32.000 0.00 0.00 0.00 2.52
568 569 6.469782 ACAAAGAAAGCATGGAGAAGAAAA 57.530 33.333 0.00 0.00 0.00 2.29
569 570 7.059202 ACAAAGAAAGCATGGAGAAGAAAAT 57.941 32.000 0.00 0.00 0.00 1.82
570 571 8.181904 ACAAAGAAAGCATGGAGAAGAAAATA 57.818 30.769 0.00 0.00 0.00 1.40
571 572 8.641541 ACAAAGAAAGCATGGAGAAGAAAATAA 58.358 29.630 0.00 0.00 0.00 1.40
572 573 9.480053 CAAAGAAAGCATGGAGAAGAAAATAAA 57.520 29.630 0.00 0.00 0.00 1.40
574 575 9.866798 AAGAAAGCATGGAGAAGAAAATAAATC 57.133 29.630 0.00 0.00 0.00 2.17
575 576 8.473219 AGAAAGCATGGAGAAGAAAATAAATCC 58.527 33.333 0.00 0.00 0.00 3.01
576 577 6.382869 AGCATGGAGAAGAAAATAAATCCG 57.617 37.500 0.00 0.00 0.00 4.18
577 578 5.888161 AGCATGGAGAAGAAAATAAATCCGT 59.112 36.000 0.00 0.00 0.00 4.69
578 579 7.054124 AGCATGGAGAAGAAAATAAATCCGTA 58.946 34.615 0.00 0.00 0.00 4.02
579 580 7.227512 AGCATGGAGAAGAAAATAAATCCGTAG 59.772 37.037 0.00 0.00 0.00 3.51
580 581 7.226720 GCATGGAGAAGAAAATAAATCCGTAGA 59.773 37.037 0.00 0.00 0.00 2.59
581 582 9.109393 CATGGAGAAGAAAATAAATCCGTAGAA 57.891 33.333 0.00 0.00 0.00 2.10
582 583 9.681062 ATGGAGAAGAAAATAAATCCGTAGAAA 57.319 29.630 0.00 0.00 0.00 2.52
583 584 9.509956 TGGAGAAGAAAATAAATCCGTAGAAAA 57.490 29.630 0.00 0.00 0.00 2.29
593 594 9.627123 AATAAATCCGTAGAAAAAGGATGATGA 57.373 29.630 0.00 0.00 40.41 2.92
594 595 7.559590 AAATCCGTAGAAAAAGGATGATGAG 57.440 36.000 0.00 0.00 40.41 2.90
595 596 5.932619 TCCGTAGAAAAAGGATGATGAGA 57.067 39.130 0.00 0.00 29.85 3.27
596 597 6.294361 TCCGTAGAAAAAGGATGATGAGAA 57.706 37.500 0.00 0.00 29.85 2.87
597 598 6.341316 TCCGTAGAAAAAGGATGATGAGAAG 58.659 40.000 0.00 0.00 29.85 2.85
598 599 5.525378 CCGTAGAAAAAGGATGATGAGAAGG 59.475 44.000 0.00 0.00 0.00 3.46
599 600 6.341316 CGTAGAAAAAGGATGATGAGAAGGA 58.659 40.000 0.00 0.00 0.00 3.36
600 601 6.256757 CGTAGAAAAAGGATGATGAGAAGGAC 59.743 42.308 0.00 0.00 0.00 3.85
601 602 6.131972 AGAAAAAGGATGATGAGAAGGACA 57.868 37.500 0.00 0.00 0.00 4.02
602 603 6.546484 AGAAAAAGGATGATGAGAAGGACAA 58.454 36.000 0.00 0.00 0.00 3.18
603 604 7.006509 AGAAAAAGGATGATGAGAAGGACAAA 58.993 34.615 0.00 0.00 0.00 2.83
604 605 7.506938 AGAAAAAGGATGATGAGAAGGACAAAA 59.493 33.333 0.00 0.00 0.00 2.44
605 606 7.601705 AAAAGGATGATGAGAAGGACAAAAA 57.398 32.000 0.00 0.00 0.00 1.94
641 642 5.930837 AAAAACCAGATGAAAGTGGTGAA 57.069 34.783 0.00 0.00 46.82 3.18
642 643 5.930837 AAAACCAGATGAAAGTGGTGAAA 57.069 34.783 0.00 0.00 46.82 2.69
643 644 6.484364 AAAACCAGATGAAAGTGGTGAAAT 57.516 33.333 0.00 0.00 46.82 2.17
644 645 5.458041 AACCAGATGAAAGTGGTGAAATG 57.542 39.130 0.00 0.00 46.82 2.32
645 646 4.728772 ACCAGATGAAAGTGGTGAAATGA 58.271 39.130 0.00 0.00 45.72 2.57
646 647 5.139727 ACCAGATGAAAGTGGTGAAATGAA 58.860 37.500 0.00 0.00 45.72 2.57
647 648 5.598005 ACCAGATGAAAGTGGTGAAATGAAA 59.402 36.000 0.00 0.00 45.72 2.69
648 649 6.098124 ACCAGATGAAAGTGGTGAAATGAAAA 59.902 34.615 0.00 0.00 45.72 2.29
649 650 6.985645 CCAGATGAAAGTGGTGAAATGAAAAA 59.014 34.615 0.00 0.00 0.00 1.94
675 676 3.879932 GGACGCAATCCTATTAACTGC 57.120 47.619 0.00 0.00 45.22 4.40
676 677 3.467803 GGACGCAATCCTATTAACTGCT 58.532 45.455 0.00 0.00 45.22 4.24
677 678 3.877508 GGACGCAATCCTATTAACTGCTT 59.122 43.478 0.00 0.00 45.22 3.91
678 679 4.024809 GGACGCAATCCTATTAACTGCTTC 60.025 45.833 0.00 0.00 45.22 3.86
679 680 4.513442 ACGCAATCCTATTAACTGCTTCA 58.487 39.130 0.00 0.00 0.00 3.02
680 681 5.126067 ACGCAATCCTATTAACTGCTTCAT 58.874 37.500 0.00 0.00 0.00 2.57
681 682 5.590259 ACGCAATCCTATTAACTGCTTCATT 59.410 36.000 0.00 0.00 0.00 2.57
682 683 6.765989 ACGCAATCCTATTAACTGCTTCATTA 59.234 34.615 0.00 0.00 0.00 1.90
683 684 7.282224 ACGCAATCCTATTAACTGCTTCATTAA 59.718 33.333 0.00 0.00 0.00 1.40
684 685 8.128582 CGCAATCCTATTAACTGCTTCATTAAA 58.871 33.333 0.00 0.00 0.00 1.52
685 686 9.801873 GCAATCCTATTAACTGCTTCATTAAAA 57.198 29.630 0.00 0.00 0.00 1.52
710 711 9.918630 AAATAGAAATTCAGGTGTCAAAATCTG 57.081 29.630 0.00 0.00 0.00 2.90
711 712 8.868522 ATAGAAATTCAGGTGTCAAAATCTGA 57.131 30.769 0.00 0.00 34.84 3.27
721 722 3.851098 GTCAAAATCTGACGAGTAGCCT 58.149 45.455 0.00 0.00 44.95 4.58
722 723 3.860536 GTCAAAATCTGACGAGTAGCCTC 59.139 47.826 0.00 0.00 44.95 4.70
723 724 3.509967 TCAAAATCTGACGAGTAGCCTCA 59.490 43.478 0.00 0.00 37.59 3.86
724 725 3.791973 AAATCTGACGAGTAGCCTCAG 57.208 47.619 0.00 0.00 37.59 3.35
725 726 1.686355 ATCTGACGAGTAGCCTCAGG 58.314 55.000 0.00 0.00 37.59 3.86
726 727 0.618981 TCTGACGAGTAGCCTCAGGA 59.381 55.000 0.00 0.00 37.59 3.86
727 728 1.213182 TCTGACGAGTAGCCTCAGGAT 59.787 52.381 0.00 0.00 37.59 3.24
728 729 1.336440 CTGACGAGTAGCCTCAGGATG 59.664 57.143 0.00 0.00 37.59 3.51
729 730 0.671251 GACGAGTAGCCTCAGGATGG 59.329 60.000 0.00 0.00 37.59 3.51
730 731 0.757188 ACGAGTAGCCTCAGGATGGG 60.757 60.000 0.00 0.00 37.59 4.00
731 732 0.468214 CGAGTAGCCTCAGGATGGGA 60.468 60.000 0.00 0.00 41.11 4.37
732 733 1.337118 GAGTAGCCTCAGGATGGGAG 58.663 60.000 0.00 0.00 41.11 4.30
737 738 3.490814 CCTCAGGATGGGAGGCTAT 57.509 57.895 0.00 0.00 41.11 2.97
738 739 0.982704 CCTCAGGATGGGAGGCTATG 59.017 60.000 0.00 0.00 41.11 2.23
739 740 0.324285 CTCAGGATGGGAGGCTATGC 59.676 60.000 0.00 0.00 41.11 3.14
740 741 1.004080 CAGGATGGGAGGCTATGCG 60.004 63.158 0.00 0.00 0.00 4.73
741 742 2.359230 GGATGGGAGGCTATGCGC 60.359 66.667 0.00 0.00 38.13 6.09
750 751 2.269241 GCTATGCGCCCTATCCCC 59.731 66.667 4.18 0.00 0.00 4.81
751 752 2.592993 GCTATGCGCCCTATCCCCA 61.593 63.158 4.18 0.00 0.00 4.96
752 753 1.915078 GCTATGCGCCCTATCCCCAT 61.915 60.000 4.18 0.00 0.00 4.00
753 754 1.496060 CTATGCGCCCTATCCCCATA 58.504 55.000 4.18 0.00 0.00 2.74
754 755 1.837439 CTATGCGCCCTATCCCCATAA 59.163 52.381 4.18 0.00 0.00 1.90
755 756 0.328258 ATGCGCCCTATCCCCATAAC 59.672 55.000 4.18 0.00 0.00 1.89
756 757 1.057275 TGCGCCCTATCCCCATAACA 61.057 55.000 4.18 0.00 0.00 2.41
757 758 0.605589 GCGCCCTATCCCCATAACAC 60.606 60.000 0.00 0.00 0.00 3.32
758 759 0.036306 CGCCCTATCCCCATAACACC 59.964 60.000 0.00 0.00 0.00 4.16
759 760 0.404426 GCCCTATCCCCATAACACCC 59.596 60.000 0.00 0.00 0.00 4.61
760 761 0.690762 CCCTATCCCCATAACACCCG 59.309 60.000 0.00 0.00 0.00 5.28
761 762 1.724545 CCTATCCCCATAACACCCGA 58.275 55.000 0.00 0.00 0.00 5.14
762 763 2.051692 CCTATCCCCATAACACCCGAA 58.948 52.381 0.00 0.00 0.00 4.30
763 764 2.224450 CCTATCCCCATAACACCCGAAC 60.224 54.545 0.00 0.00 0.00 3.95
764 765 1.291109 ATCCCCATAACACCCGAACA 58.709 50.000 0.00 0.00 0.00 3.18
765 766 1.291109 TCCCCATAACACCCGAACAT 58.709 50.000 0.00 0.00 0.00 2.71
766 767 1.210967 TCCCCATAACACCCGAACATC 59.789 52.381 0.00 0.00 0.00 3.06
767 768 1.065053 CCCCATAACACCCGAACATCA 60.065 52.381 0.00 0.00 0.00 3.07
768 769 2.288666 CCCATAACACCCGAACATCAG 58.711 52.381 0.00 0.00 0.00 2.90
769 770 2.288666 CCATAACACCCGAACATCAGG 58.711 52.381 0.00 0.00 0.00 3.86
770 771 1.670811 CATAACACCCGAACATCAGGC 59.329 52.381 0.00 0.00 0.00 4.85
771 772 0.687920 TAACACCCGAACATCAGGCA 59.312 50.000 0.00 0.00 0.00 4.75
772 773 0.889186 AACACCCGAACATCAGGCAC 60.889 55.000 0.00 0.00 0.00 5.01
773 774 2.040544 CACCCGAACATCAGGCACC 61.041 63.158 0.00 0.00 0.00 5.01
774 775 2.350895 CCCGAACATCAGGCACCA 59.649 61.111 0.00 0.00 0.00 4.17
775 776 1.746615 CCCGAACATCAGGCACCAG 60.747 63.158 0.00 0.00 0.00 4.00
776 777 2.401766 CCGAACATCAGGCACCAGC 61.402 63.158 0.00 0.00 41.10 4.85
777 778 1.672030 CGAACATCAGGCACCAGCA 60.672 57.895 0.00 0.00 44.61 4.41
778 779 1.878775 GAACATCAGGCACCAGCAC 59.121 57.895 0.00 0.00 44.61 4.40
779 780 0.890542 GAACATCAGGCACCAGCACA 60.891 55.000 0.00 0.00 44.61 4.57
780 781 0.251474 AACATCAGGCACCAGCACAT 60.251 50.000 0.00 0.00 44.61 3.21
781 782 0.963856 ACATCAGGCACCAGCACATG 60.964 55.000 0.00 0.00 44.61 3.21
799 800 2.791383 TGGCAAATCCAACGTGAAAG 57.209 45.000 0.00 0.00 43.21 2.62
800 801 2.028130 TGGCAAATCCAACGTGAAAGT 58.972 42.857 0.00 0.00 43.21 2.66
801 802 2.034053 TGGCAAATCCAACGTGAAAGTC 59.966 45.455 0.00 0.00 43.21 3.01
802 803 2.607038 GGCAAATCCAACGTGAAAGTCC 60.607 50.000 0.00 0.00 34.01 3.85
803 804 2.607038 GCAAATCCAACGTGAAAGTCCC 60.607 50.000 0.00 0.00 0.00 4.46
804 805 1.519408 AATCCAACGTGAAAGTCCCG 58.481 50.000 0.00 0.00 0.00 5.14
805 806 0.395312 ATCCAACGTGAAAGTCCCGT 59.605 50.000 0.00 0.00 36.17 5.28
806 807 0.178533 TCCAACGTGAAAGTCCCGTT 59.821 50.000 0.00 0.00 44.81 4.44
807 808 0.584876 CCAACGTGAAAGTCCCGTTC 59.415 55.000 0.00 0.00 42.34 3.95
808 809 0.231279 CAACGTGAAAGTCCCGTTCG 59.769 55.000 0.00 0.00 42.34 3.95
809 810 0.179103 AACGTGAAAGTCCCGTTCGT 60.179 50.000 0.00 0.00 40.46 3.85
810 811 0.179103 ACGTGAAAGTCCCGTTCGTT 60.179 50.000 0.00 0.00 0.00 3.85
811 812 0.932399 CGTGAAAGTCCCGTTCGTTT 59.068 50.000 0.00 0.00 0.00 3.60
812 813 2.126467 CGTGAAAGTCCCGTTCGTTTA 58.874 47.619 0.00 0.00 0.00 2.01
813 814 2.154389 CGTGAAAGTCCCGTTCGTTTAG 59.846 50.000 0.00 0.00 0.00 1.85
814 815 3.383761 GTGAAAGTCCCGTTCGTTTAGA 58.616 45.455 0.00 0.00 0.00 2.10
815 816 3.803778 GTGAAAGTCCCGTTCGTTTAGAA 59.196 43.478 0.00 0.00 36.31 2.10
816 817 4.450080 GTGAAAGTCCCGTTCGTTTAGAAT 59.550 41.667 0.00 0.00 41.49 2.40
817 818 5.049886 GTGAAAGTCCCGTTCGTTTAGAATT 60.050 40.000 0.00 0.00 41.49 2.17
818 819 5.528320 TGAAAGTCCCGTTCGTTTAGAATTT 59.472 36.000 0.00 0.00 41.49 1.82
819 820 6.038492 TGAAAGTCCCGTTCGTTTAGAATTTT 59.962 34.615 0.00 0.00 41.49 1.82
820 821 5.602458 AGTCCCGTTCGTTTAGAATTTTC 57.398 39.130 0.00 0.00 41.49 2.29
821 822 4.151157 AGTCCCGTTCGTTTAGAATTTTCG 59.849 41.667 0.00 0.00 41.49 3.46
870 871 2.058595 CCGTCAGGGATCGGGTTCT 61.059 63.158 0.00 0.00 42.61 3.01
907 920 2.270205 CCACCCACCTGCTGCTAG 59.730 66.667 0.00 0.00 0.00 3.42
929 942 1.538512 TCACGTCACGTAGCTAGCTTT 59.461 47.619 24.88 4.85 38.32 3.51
970 986 0.255890 CCCGGTCCAACAAGATCCAT 59.744 55.000 0.00 0.00 0.00 3.41
1173 1189 4.380781 TTCATCCGCCACGCCGAA 62.381 61.111 0.00 0.00 0.00 4.30
1307 1329 0.463654 AGCGTCAAGAACACCAAGCA 60.464 50.000 0.00 0.00 0.00 3.91
1340 1362 4.749310 CAGCTTCGACGGCCAGCT 62.749 66.667 8.68 8.68 45.02 4.24
1705 1748 4.854399 TGATTGATTGCTTCGTCGTTTTT 58.146 34.783 0.00 0.00 0.00 1.94
1730 1773 1.833860 TTTTGAACTTTGCTTCGCCG 58.166 45.000 0.00 0.00 0.00 6.46
1731 1774 0.736053 TTTGAACTTTGCTTCGCCGT 59.264 45.000 0.00 0.00 0.00 5.68
1732 1775 0.736053 TTGAACTTTGCTTCGCCGTT 59.264 45.000 0.00 0.00 0.00 4.44
1733 1776 0.736053 TGAACTTTGCTTCGCCGTTT 59.264 45.000 0.00 0.00 0.00 3.60
1734 1777 1.133407 TGAACTTTGCTTCGCCGTTTT 59.867 42.857 0.00 0.00 0.00 2.43
1742 1785 2.288334 TGCTTCGCCGTTTTCAGTAGTA 60.288 45.455 0.00 0.00 0.00 1.82
1806 1849 1.620822 AGATTGTCCCCACTTTGTGC 58.379 50.000 0.00 0.00 31.34 4.57
1815 1858 1.199624 CCACTTTGTGCGTGCTTTTC 58.800 50.000 0.00 0.00 31.34 2.29
1829 1872 5.064707 GCGTGCTTTTCCACTTAGATCATTA 59.935 40.000 0.00 0.00 33.60 1.90
1833 1876 5.532779 GCTTTTCCACTTAGATCATTAGGGG 59.467 44.000 0.00 0.00 33.60 4.79
1926 1969 1.201647 AGAGTTGGTGTATCACGTCCG 59.798 52.381 0.00 0.00 34.83 4.79
1928 1971 1.079681 TTGGTGTATCACGTCCGCC 60.080 57.895 0.00 0.00 34.83 6.13
1934 1977 0.591741 GTATCACGTCCGCCTTCTCG 60.592 60.000 0.00 0.00 0.00 4.04
1937 1980 2.049433 ACGTCCGCCTTCTCGTTG 60.049 61.111 0.00 0.00 32.62 4.10
1938 1981 2.257371 CGTCCGCCTTCTCGTTGA 59.743 61.111 0.00 0.00 0.00 3.18
1953 1996 3.821033 CTCGTTGACTTTTTCCTTCCCAT 59.179 43.478 0.00 0.00 0.00 4.00
1956 1999 2.247358 TGACTTTTTCCTTCCCATGCC 58.753 47.619 0.00 0.00 0.00 4.40
2077 2853 3.621682 TTGGTACTTCCCCAAAACCAT 57.378 42.857 0.00 0.00 39.82 3.55
2134 2911 8.961294 ATCAAAATCTCAGTCAAATCGAAAAG 57.039 30.769 0.00 0.00 0.00 2.27
2135 2912 6.857964 TCAAAATCTCAGTCAAATCGAAAAGC 59.142 34.615 0.00 0.00 0.00 3.51
2197 2974 5.885352 TCTCACCAAAAACTCAACTGAATCA 59.115 36.000 0.00 0.00 0.00 2.57
2198 2975 6.376864 TCTCACCAAAAACTCAACTGAATCAA 59.623 34.615 0.00 0.00 0.00 2.57
2423 3317 7.939039 TCAACATCTTCTTGACTTGGAAACTAT 59.061 33.333 0.00 0.00 0.00 2.12
2450 3344 1.808133 GCCTTCTCCGCAAGATTCGAT 60.808 52.381 0.00 0.00 43.02 3.59
2613 3555 0.953960 GCTCGGTCGTCCCAATTTGT 60.954 55.000 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 6.796705 AGTATATTTTACTAATGGCGCACC 57.203 37.500 10.83 0.00 0.00 5.01
18 19 9.720769 AGCACGCCATTAGTATATTTTACTAAT 57.279 29.630 11.52 11.52 46.06 1.73
20 21 9.630098 GTAGCACGCCATTAGTATATTTTACTA 57.370 33.333 0.00 0.00 0.00 1.82
21 22 8.365647 AGTAGCACGCCATTAGTATATTTTACT 58.634 33.333 0.00 0.00 0.00 2.24
22 23 8.530269 AGTAGCACGCCATTAGTATATTTTAC 57.470 34.615 0.00 0.00 0.00 2.01
24 25 9.720769 ATTAGTAGCACGCCATTAGTATATTTT 57.279 29.630 0.00 0.00 0.00 1.82
25 26 9.151471 CATTAGTAGCACGCCATTAGTATATTT 57.849 33.333 0.00 0.00 0.00 1.40
26 27 7.764443 CCATTAGTAGCACGCCATTAGTATATT 59.236 37.037 0.00 0.00 0.00 1.28
27 28 7.265673 CCATTAGTAGCACGCCATTAGTATAT 58.734 38.462 0.00 0.00 0.00 0.86
28 29 6.627243 CCATTAGTAGCACGCCATTAGTATA 58.373 40.000 0.00 0.00 0.00 1.47
29 30 5.479306 CCATTAGTAGCACGCCATTAGTAT 58.521 41.667 0.00 0.00 0.00 2.12
30 31 4.798263 GCCATTAGTAGCACGCCATTAGTA 60.798 45.833 0.00 0.00 0.00 1.82
31 32 3.728845 CCATTAGTAGCACGCCATTAGT 58.271 45.455 0.00 0.00 0.00 2.24
32 33 2.480419 GCCATTAGTAGCACGCCATTAG 59.520 50.000 0.00 0.00 0.00 1.73
33 34 2.489971 GCCATTAGTAGCACGCCATTA 58.510 47.619 0.00 0.00 0.00 1.90
34 35 1.308998 GCCATTAGTAGCACGCCATT 58.691 50.000 0.00 0.00 0.00 3.16
35 36 0.880278 CGCCATTAGTAGCACGCCAT 60.880 55.000 0.00 0.00 0.00 4.40
36 37 1.520564 CGCCATTAGTAGCACGCCA 60.521 57.895 0.00 0.00 0.00 5.69
37 38 2.882366 GCGCCATTAGTAGCACGCC 61.882 63.158 0.00 0.00 40.43 5.68
38 39 2.171079 TGCGCCATTAGTAGCACGC 61.171 57.895 4.18 0.00 46.05 5.34
39 40 4.102561 TGCGCCATTAGTAGCACG 57.897 55.556 4.18 0.00 34.39 5.34
41 42 1.599576 TGGTGCGCCATTAGTAGCA 59.400 52.632 16.89 0.00 40.46 3.49
42 43 4.532490 TGGTGCGCCATTAGTAGC 57.468 55.556 16.89 0.00 40.46 3.58
54 55 1.375853 TAATGGCGCATCAGTGGTGC 61.376 55.000 18.82 18.82 40.91 5.01
55 56 1.093972 TTAATGGCGCATCAGTGGTG 58.906 50.000 10.83 0.00 0.00 4.17
56 57 1.677576 CATTAATGGCGCATCAGTGGT 59.322 47.619 10.83 0.00 0.00 4.16
57 58 1.001048 CCATTAATGGCGCATCAGTGG 60.001 52.381 21.32 6.13 41.75 4.00
58 59 2.410785 CCATTAATGGCGCATCAGTG 57.589 50.000 21.32 0.00 41.75 3.66
69 70 3.058016 CGCACCTAATCTGGCCATTAATG 60.058 47.826 5.51 8.58 0.00 1.90
70 71 3.149196 CGCACCTAATCTGGCCATTAAT 58.851 45.455 5.51 0.00 0.00 1.40
71 72 2.571212 CGCACCTAATCTGGCCATTAA 58.429 47.619 5.51 0.00 0.00 1.40
72 73 1.813862 GCGCACCTAATCTGGCCATTA 60.814 52.381 5.51 1.51 0.00 1.90
73 74 1.103398 GCGCACCTAATCTGGCCATT 61.103 55.000 5.51 0.00 0.00 3.16
74 75 1.526917 GCGCACCTAATCTGGCCAT 60.527 57.895 5.51 0.00 0.00 4.40
75 76 2.124736 GCGCACCTAATCTGGCCA 60.125 61.111 4.71 4.71 0.00 5.36
76 77 2.902343 GGCGCACCTAATCTGGCC 60.902 66.667 10.83 0.00 0.00 5.36
77 78 1.103398 AATGGCGCACCTAATCTGGC 61.103 55.000 10.83 0.00 36.63 4.85
78 79 2.146342 CTAATGGCGCACCTAATCTGG 58.854 52.381 10.83 0.00 36.63 3.86
79 80 2.838736 ACTAATGGCGCACCTAATCTG 58.161 47.619 10.83 0.00 36.63 2.90
80 81 3.555168 GCTACTAATGGCGCACCTAATCT 60.555 47.826 10.83 0.00 36.63 2.40
81 82 2.737252 GCTACTAATGGCGCACCTAATC 59.263 50.000 10.83 0.00 36.63 1.75
82 83 2.550208 GGCTACTAATGGCGCACCTAAT 60.550 50.000 10.83 0.00 36.63 1.73
83 84 1.202604 GGCTACTAATGGCGCACCTAA 60.203 52.381 10.83 0.00 36.63 2.69
84 85 0.391597 GGCTACTAATGGCGCACCTA 59.608 55.000 10.83 0.00 36.63 3.08
85 86 1.146263 GGCTACTAATGGCGCACCT 59.854 57.895 10.83 0.00 36.63 4.00
86 87 1.892391 GGGCTACTAATGGCGCACC 60.892 63.158 10.83 0.00 43.73 5.01
87 88 0.463833 AAGGGCTACTAATGGCGCAC 60.464 55.000 10.83 0.00 46.28 5.34
88 89 0.254747 AAAGGGCTACTAATGGCGCA 59.745 50.000 10.83 0.00 46.28 6.09
89 90 1.389555 AAAAGGGCTACTAATGGCGC 58.610 50.000 0.00 0.00 44.50 6.53
90 91 3.279434 AGAAAAAGGGCTACTAATGGCG 58.721 45.455 0.00 0.00 31.79 5.69
91 92 5.437946 ACTAGAAAAAGGGCTACTAATGGC 58.562 41.667 0.00 0.00 0.00 4.40
92 93 7.711339 CACTACTAGAAAAAGGGCTACTAATGG 59.289 40.741 0.00 0.00 0.00 3.16
93 94 7.711339 CCACTACTAGAAAAAGGGCTACTAATG 59.289 40.741 0.00 0.00 0.00 1.90
94 95 7.147532 CCCACTACTAGAAAAAGGGCTACTAAT 60.148 40.741 0.00 0.00 0.00 1.73
95 96 6.155737 CCCACTACTAGAAAAAGGGCTACTAA 59.844 42.308 0.00 0.00 0.00 2.24
96 97 5.659971 CCCACTACTAGAAAAAGGGCTACTA 59.340 44.000 0.00 0.00 0.00 1.82
97 98 4.470304 CCCACTACTAGAAAAAGGGCTACT 59.530 45.833 0.00 0.00 0.00 2.57
98 99 4.468868 TCCCACTACTAGAAAAAGGGCTAC 59.531 45.833 0.00 0.00 34.80 3.58
99 100 4.468868 GTCCCACTACTAGAAAAAGGGCTA 59.531 45.833 0.00 0.00 34.80 3.93
100 101 3.263681 GTCCCACTACTAGAAAAAGGGCT 59.736 47.826 0.00 0.00 34.80 5.19
101 102 3.008704 TGTCCCACTACTAGAAAAAGGGC 59.991 47.826 0.00 0.00 34.80 5.19
102 103 4.903045 TGTCCCACTACTAGAAAAAGGG 57.097 45.455 0.00 1.10 36.15 3.95
103 104 5.705905 CCTTTGTCCCACTACTAGAAAAAGG 59.294 44.000 6.55 6.55 44.53 3.11
104 105 6.531021 TCCTTTGTCCCACTACTAGAAAAAG 58.469 40.000 0.00 0.00 35.49 2.27
105 106 6.503560 TCCTTTGTCCCACTACTAGAAAAA 57.496 37.500 0.00 0.00 0.00 1.94
106 107 6.296259 GGATCCTTTGTCCCACTACTAGAAAA 60.296 42.308 3.84 0.00 0.00 2.29
107 108 5.189145 GGATCCTTTGTCCCACTACTAGAAA 59.811 44.000 3.84 0.00 0.00 2.52
108 109 4.715297 GGATCCTTTGTCCCACTACTAGAA 59.285 45.833 3.84 0.00 0.00 2.10
109 110 4.264668 TGGATCCTTTGTCCCACTACTAGA 60.265 45.833 14.23 0.00 34.76 2.43
110 111 4.030913 TGGATCCTTTGTCCCACTACTAG 58.969 47.826 14.23 0.00 34.76 2.57
111 112 4.069312 TGGATCCTTTGTCCCACTACTA 57.931 45.455 14.23 0.00 34.76 1.82
112 113 2.915869 TGGATCCTTTGTCCCACTACT 58.084 47.619 14.23 0.00 34.76 2.57
113 114 3.054361 ACATGGATCCTTTGTCCCACTAC 60.054 47.826 14.23 0.00 34.76 2.73
114 115 3.054434 CACATGGATCCTTTGTCCCACTA 60.054 47.826 14.23 0.00 34.76 2.74
115 116 1.995542 ACATGGATCCTTTGTCCCACT 59.004 47.619 14.23 0.00 34.76 4.00
116 117 2.094675 CACATGGATCCTTTGTCCCAC 58.905 52.381 14.23 0.00 34.76 4.61
117 118 1.616725 GCACATGGATCCTTTGTCCCA 60.617 52.381 14.23 0.00 34.76 4.37
137 138 4.087892 CACCACCGGCTCCTCCAG 62.088 72.222 0.00 0.00 34.01 3.86
164 165 2.597217 TTGCTGCCCAGTTTCCGG 60.597 61.111 0.00 0.00 0.00 5.14
165 166 2.956987 CTTGCTGCCCAGTTTCCG 59.043 61.111 0.00 0.00 0.00 4.30
166 167 2.653115 GCTTGCTGCCCAGTTTCC 59.347 61.111 0.00 0.00 35.15 3.13
167 168 2.256461 CGCTTGCTGCCCAGTTTC 59.744 61.111 0.00 0.00 38.78 2.78
168 169 3.297620 CCGCTTGCTGCCCAGTTT 61.298 61.111 0.00 0.00 38.78 2.66
169 170 4.586235 ACCGCTTGCTGCCCAGTT 62.586 61.111 0.00 0.00 38.78 3.16
243 244 3.142838 CCTTTCCCATGCCGCTGG 61.143 66.667 0.00 0.00 35.95 4.85
244 245 3.830192 GCCTTTCCCATGCCGCTG 61.830 66.667 0.00 0.00 0.00 5.18
245 246 4.365111 TGCCTTTCCCATGCCGCT 62.365 61.111 0.00 0.00 0.00 5.52
246 247 3.830192 CTGCCTTTCCCATGCCGC 61.830 66.667 0.00 0.00 0.00 6.53
247 248 3.142838 CCTGCCTTTCCCATGCCG 61.143 66.667 0.00 0.00 0.00 5.69
248 249 1.305213 TTCCTGCCTTTCCCATGCC 60.305 57.895 0.00 0.00 0.00 4.40
249 250 0.613012 ACTTCCTGCCTTTCCCATGC 60.613 55.000 0.00 0.00 0.00 4.06
250 251 2.239654 TCTACTTCCTGCCTTTCCCATG 59.760 50.000 0.00 0.00 0.00 3.66
251 252 2.562296 TCTACTTCCTGCCTTTCCCAT 58.438 47.619 0.00 0.00 0.00 4.00
252 253 2.038863 TCTACTTCCTGCCTTTCCCA 57.961 50.000 0.00 0.00 0.00 4.37
253 254 2.039879 TGTTCTACTTCCTGCCTTTCCC 59.960 50.000 0.00 0.00 0.00 3.97
254 255 3.418684 TGTTCTACTTCCTGCCTTTCC 57.581 47.619 0.00 0.00 0.00 3.13
255 256 7.390718 TCTTTATTGTTCTACTTCCTGCCTTTC 59.609 37.037 0.00 0.00 0.00 2.62
256 257 7.231467 TCTTTATTGTTCTACTTCCTGCCTTT 58.769 34.615 0.00 0.00 0.00 3.11
257 258 6.779860 TCTTTATTGTTCTACTTCCTGCCTT 58.220 36.000 0.00 0.00 0.00 4.35
258 259 6.374417 TCTTTATTGTTCTACTTCCTGCCT 57.626 37.500 0.00 0.00 0.00 4.75
259 260 7.466050 CGAATCTTTATTGTTCTACTTCCTGCC 60.466 40.741 0.00 0.00 0.00 4.85
260 261 7.402640 CGAATCTTTATTGTTCTACTTCCTGC 58.597 38.462 0.00 0.00 0.00 4.85
261 262 7.764443 TCCGAATCTTTATTGTTCTACTTCCTG 59.236 37.037 0.00 0.00 0.00 3.86
262 263 7.848128 TCCGAATCTTTATTGTTCTACTTCCT 58.152 34.615 0.00 0.00 0.00 3.36
263 264 7.980099 TCTCCGAATCTTTATTGTTCTACTTCC 59.020 37.037 0.00 0.00 0.00 3.46
264 265 8.928270 TCTCCGAATCTTTATTGTTCTACTTC 57.072 34.615 0.00 0.00 0.00 3.01
265 266 9.892130 AATCTCCGAATCTTTATTGTTCTACTT 57.108 29.630 0.00 0.00 0.00 2.24
266 267 9.319143 CAATCTCCGAATCTTTATTGTTCTACT 57.681 33.333 0.00 0.00 0.00 2.57
267 268 9.314321 TCAATCTCCGAATCTTTATTGTTCTAC 57.686 33.333 0.00 0.00 0.00 2.59
268 269 9.884636 TTCAATCTCCGAATCTTTATTGTTCTA 57.115 29.630 0.00 0.00 0.00 2.10
269 270 8.792830 TTCAATCTCCGAATCTTTATTGTTCT 57.207 30.769 0.00 0.00 0.00 3.01
270 271 9.443283 CATTCAATCTCCGAATCTTTATTGTTC 57.557 33.333 0.00 0.00 30.65 3.18
271 272 8.408601 CCATTCAATCTCCGAATCTTTATTGTT 58.591 33.333 0.00 0.00 30.65 2.83
272 273 7.013655 CCCATTCAATCTCCGAATCTTTATTGT 59.986 37.037 0.00 0.00 30.65 2.71
273 274 7.229306 TCCCATTCAATCTCCGAATCTTTATTG 59.771 37.037 0.00 0.00 30.65 1.90
274 275 7.290061 TCCCATTCAATCTCCGAATCTTTATT 58.710 34.615 0.00 0.00 30.65 1.40
275 276 6.841601 TCCCATTCAATCTCCGAATCTTTAT 58.158 36.000 0.00 0.00 30.65 1.40
276 277 6.247229 TCCCATTCAATCTCCGAATCTTTA 57.753 37.500 0.00 0.00 30.65 1.85
277 278 5.116084 TCCCATTCAATCTCCGAATCTTT 57.884 39.130 0.00 0.00 30.65 2.52
278 279 4.778213 TCCCATTCAATCTCCGAATCTT 57.222 40.909 0.00 0.00 30.65 2.40
279 280 4.410228 TCTTCCCATTCAATCTCCGAATCT 59.590 41.667 0.00 0.00 30.65 2.40
280 281 4.708177 TCTTCCCATTCAATCTCCGAATC 58.292 43.478 0.00 0.00 30.65 2.52
281 282 4.778213 TCTTCCCATTCAATCTCCGAAT 57.222 40.909 0.00 0.00 33.33 3.34
282 283 4.568072 TTCTTCCCATTCAATCTCCGAA 57.432 40.909 0.00 0.00 0.00 4.30
283 284 4.778213 ATTCTTCCCATTCAATCTCCGA 57.222 40.909 0.00 0.00 0.00 4.55
284 285 4.037208 CCAATTCTTCCCATTCAATCTCCG 59.963 45.833 0.00 0.00 0.00 4.63
285 286 5.203528 TCCAATTCTTCCCATTCAATCTCC 58.796 41.667 0.00 0.00 0.00 3.71
286 287 6.125029 TCTCCAATTCTTCCCATTCAATCTC 58.875 40.000 0.00 0.00 0.00 2.75
287 288 6.083487 TCTCCAATTCTTCCCATTCAATCT 57.917 37.500 0.00 0.00 0.00 2.40
288 289 6.604795 TCTTCTCCAATTCTTCCCATTCAATC 59.395 38.462 0.00 0.00 0.00 2.67
289 290 6.496743 TCTTCTCCAATTCTTCCCATTCAAT 58.503 36.000 0.00 0.00 0.00 2.57
290 291 5.891198 TCTTCTCCAATTCTTCCCATTCAA 58.109 37.500 0.00 0.00 0.00 2.69
291 292 5.519183 TCTTCTCCAATTCTTCCCATTCA 57.481 39.130 0.00 0.00 0.00 2.57
292 293 6.840780 TTTCTTCTCCAATTCTTCCCATTC 57.159 37.500 0.00 0.00 0.00 2.67
293 294 6.212187 CCTTTTCTTCTCCAATTCTTCCCATT 59.788 38.462 0.00 0.00 0.00 3.16
294 295 5.718607 CCTTTTCTTCTCCAATTCTTCCCAT 59.281 40.000 0.00 0.00 0.00 4.00
295 296 5.079643 CCTTTTCTTCTCCAATTCTTCCCA 58.920 41.667 0.00 0.00 0.00 4.37
296 297 5.080337 ACCTTTTCTTCTCCAATTCTTCCC 58.920 41.667 0.00 0.00 0.00 3.97
297 298 7.448777 ACTTACCTTTTCTTCTCCAATTCTTCC 59.551 37.037 0.00 0.00 0.00 3.46
298 299 8.397575 ACTTACCTTTTCTTCTCCAATTCTTC 57.602 34.615 0.00 0.00 0.00 2.87
299 300 7.998964 TGACTTACCTTTTCTTCTCCAATTCTT 59.001 33.333 0.00 0.00 0.00 2.52
300 301 7.518188 TGACTTACCTTTTCTTCTCCAATTCT 58.482 34.615 0.00 0.00 0.00 2.40
301 302 7.745620 TGACTTACCTTTTCTTCTCCAATTC 57.254 36.000 0.00 0.00 0.00 2.17
302 303 7.944554 TCATGACTTACCTTTTCTTCTCCAATT 59.055 33.333 0.00 0.00 0.00 2.32
303 304 7.461749 TCATGACTTACCTTTTCTTCTCCAAT 58.538 34.615 0.00 0.00 0.00 3.16
304 305 6.837312 TCATGACTTACCTTTTCTTCTCCAA 58.163 36.000 0.00 0.00 0.00 3.53
305 306 6.433847 TCATGACTTACCTTTTCTTCTCCA 57.566 37.500 0.00 0.00 0.00 3.86
306 307 7.826744 AGAATCATGACTTACCTTTTCTTCTCC 59.173 37.037 0.00 0.00 0.00 3.71
307 308 8.785329 AGAATCATGACTTACCTTTTCTTCTC 57.215 34.615 0.00 0.00 0.00 2.87
308 309 9.579932 AAAGAATCATGACTTACCTTTTCTTCT 57.420 29.630 14.03 5.79 32.61 2.85
311 312 9.354673 TGAAAAGAATCATGACTTACCTTTTCT 57.645 29.630 27.29 17.51 43.70 2.52
325 326 9.865321 CCAATCAACAGTTATGAAAAGAATCAT 57.135 29.630 0.00 0.00 42.52 2.45
326 327 8.859090 ACCAATCAACAGTTATGAAAAGAATCA 58.141 29.630 0.00 0.00 0.00 2.57
327 328 9.696917 AACCAATCAACAGTTATGAAAAGAATC 57.303 29.630 0.00 0.00 0.00 2.52
329 330 9.883142 AAAACCAATCAACAGTTATGAAAAGAA 57.117 25.926 0.00 0.00 0.00 2.52
330 331 9.883142 AAAAACCAATCAACAGTTATGAAAAGA 57.117 25.926 0.00 0.00 0.00 2.52
338 339 9.757227 CTCCAAATAAAAACCAATCAACAGTTA 57.243 29.630 0.00 0.00 0.00 2.24
339 340 8.482128 TCTCCAAATAAAAACCAATCAACAGTT 58.518 29.630 0.00 0.00 0.00 3.16
340 341 8.017418 TCTCCAAATAAAAACCAATCAACAGT 57.983 30.769 0.00 0.00 0.00 3.55
341 342 8.885494 TTCTCCAAATAAAAACCAATCAACAG 57.115 30.769 0.00 0.00 0.00 3.16
342 343 7.930865 CCTTCTCCAAATAAAAACCAATCAACA 59.069 33.333 0.00 0.00 0.00 3.33
343 344 8.147704 TCCTTCTCCAAATAAAAACCAATCAAC 58.852 33.333 0.00 0.00 0.00 3.18
344 345 8.256356 TCCTTCTCCAAATAAAAACCAATCAA 57.744 30.769 0.00 0.00 0.00 2.57
345 346 7.847711 TCCTTCTCCAAATAAAAACCAATCA 57.152 32.000 0.00 0.00 0.00 2.57
346 347 7.819415 CCTTCCTTCTCCAAATAAAAACCAATC 59.181 37.037 0.00 0.00 0.00 2.67
347 348 7.292356 ACCTTCCTTCTCCAAATAAAAACCAAT 59.708 33.333 0.00 0.00 0.00 3.16
348 349 6.613679 ACCTTCCTTCTCCAAATAAAAACCAA 59.386 34.615 0.00 0.00 0.00 3.67
349 350 6.140377 ACCTTCCTTCTCCAAATAAAAACCA 58.860 36.000 0.00 0.00 0.00 3.67
350 351 6.665992 ACCTTCCTTCTCCAAATAAAAACC 57.334 37.500 0.00 0.00 0.00 3.27
351 352 9.692749 CTAAACCTTCCTTCTCCAAATAAAAAC 57.307 33.333 0.00 0.00 0.00 2.43
352 353 9.649316 TCTAAACCTTCCTTCTCCAAATAAAAA 57.351 29.630 0.00 0.00 0.00 1.94
353 354 9.822727 ATCTAAACCTTCCTTCTCCAAATAAAA 57.177 29.630 0.00 0.00 0.00 1.52
363 364 9.771140 ACCGATATATATCTAAACCTTCCTTCT 57.229 33.333 18.39 0.00 0.00 2.85
383 384 9.880157 AAAAACTGATTAGCTACTTAACCGATA 57.120 29.630 0.00 0.00 0.00 2.92
384 385 8.788325 AAAAACTGATTAGCTACTTAACCGAT 57.212 30.769 0.00 0.00 0.00 4.18
419 420 9.182933 CGGATTTTAAGAAAACAAATAACGGAA 57.817 29.630 0.00 0.00 32.37 4.30
420 421 8.351461 ACGGATTTTAAGAAAACAAATAACGGA 58.649 29.630 0.00 0.00 32.37 4.69
421 422 8.510132 ACGGATTTTAAGAAAACAAATAACGG 57.490 30.769 0.00 0.00 32.37 4.44
450 451 9.499479 TCAATGCAATTTGCTTTAGGAAATAAA 57.501 25.926 21.19 0.00 43.69 1.40
451 452 9.669887 ATCAATGCAATTTGCTTTAGGAAATAA 57.330 25.926 21.19 0.00 43.69 1.40
452 453 9.100554 CATCAATGCAATTTGCTTTAGGAAATA 57.899 29.630 21.19 0.00 43.69 1.40
453 454 7.066525 CCATCAATGCAATTTGCTTTAGGAAAT 59.933 33.333 21.19 3.71 45.86 2.17
454 455 6.372103 CCATCAATGCAATTTGCTTTAGGAAA 59.628 34.615 21.19 0.00 45.31 3.13
455 456 5.875910 CCATCAATGCAATTTGCTTTAGGAA 59.124 36.000 21.19 8.75 45.31 3.36
456 457 5.187381 TCCATCAATGCAATTTGCTTTAGGA 59.813 36.000 21.19 21.20 45.31 2.94
457 458 5.421277 TCCATCAATGCAATTTGCTTTAGG 58.579 37.500 21.19 19.73 45.31 2.69
458 459 6.814644 TCTTCCATCAATGCAATTTGCTTTAG 59.185 34.615 21.19 13.54 45.31 1.85
459 460 6.699366 TCTTCCATCAATGCAATTTGCTTTA 58.301 32.000 21.19 10.78 45.31 1.85
460 461 5.553123 TCTTCCATCAATGCAATTTGCTTT 58.447 33.333 21.19 17.79 45.31 3.51
461 462 5.155278 TCTTCCATCAATGCAATTTGCTT 57.845 34.783 21.19 12.91 45.31 3.91
462 463 4.811969 TCTTCCATCAATGCAATTTGCT 57.188 36.364 21.19 5.37 45.31 3.91
463 464 5.866335 TTTCTTCCATCAATGCAATTTGC 57.134 34.783 14.49 14.49 45.29 3.68
464 465 6.237996 CCGATTTCTTCCATCAATGCAATTTG 60.238 38.462 0.00 0.00 31.22 2.32
465 466 5.813672 CCGATTTCTTCCATCAATGCAATTT 59.186 36.000 0.00 0.00 31.22 1.82
466 467 5.105228 ACCGATTTCTTCCATCAATGCAATT 60.105 36.000 0.00 0.00 36.63 2.32
467 468 4.403432 ACCGATTTCTTCCATCAATGCAAT 59.597 37.500 0.00 0.00 0.00 3.56
468 469 3.763360 ACCGATTTCTTCCATCAATGCAA 59.237 39.130 0.00 0.00 0.00 4.08
469 470 3.355378 ACCGATTTCTTCCATCAATGCA 58.645 40.909 0.00 0.00 0.00 3.96
470 471 4.376340 AACCGATTTCTTCCATCAATGC 57.624 40.909 0.00 0.00 0.00 3.56
471 472 8.931385 AAATTAACCGATTTCTTCCATCAATG 57.069 30.769 0.00 0.00 0.00 2.82
473 474 9.456147 TCTAAATTAACCGATTTCTTCCATCAA 57.544 29.630 0.00 0.00 31.96 2.57
474 475 9.456147 TTCTAAATTAACCGATTTCTTCCATCA 57.544 29.630 0.00 0.00 31.96 3.07
517 518 6.378848 ACCAGCACTTTTCTAAGGTACAAAAA 59.621 34.615 0.00 0.00 35.61 1.94
518 519 5.889289 ACCAGCACTTTTCTAAGGTACAAAA 59.111 36.000 0.00 0.00 35.61 2.44
519 520 5.442391 ACCAGCACTTTTCTAAGGTACAAA 58.558 37.500 0.00 0.00 35.61 2.83
520 521 5.043737 ACCAGCACTTTTCTAAGGTACAA 57.956 39.130 0.00 0.00 35.61 2.41
521 522 4.699925 ACCAGCACTTTTCTAAGGTACA 57.300 40.909 0.00 0.00 35.61 2.90
522 523 6.484308 TGTAAACCAGCACTTTTCTAAGGTAC 59.516 38.462 0.00 0.00 35.61 3.34
523 524 6.593807 TGTAAACCAGCACTTTTCTAAGGTA 58.406 36.000 0.00 0.00 35.61 3.08
524 525 5.442391 TGTAAACCAGCACTTTTCTAAGGT 58.558 37.500 0.00 0.00 35.61 3.50
525 526 6.385649 TTGTAAACCAGCACTTTTCTAAGG 57.614 37.500 0.00 0.00 35.61 2.69
526 527 7.703328 TCTTTGTAAACCAGCACTTTTCTAAG 58.297 34.615 0.00 0.00 37.40 2.18
527 528 7.633193 TCTTTGTAAACCAGCACTTTTCTAA 57.367 32.000 0.00 0.00 0.00 2.10
528 529 7.633193 TTCTTTGTAAACCAGCACTTTTCTA 57.367 32.000 0.00 0.00 0.00 2.10
529 530 6.524101 TTCTTTGTAAACCAGCACTTTTCT 57.476 33.333 0.00 0.00 0.00 2.52
530 531 6.237835 GCTTTCTTTGTAAACCAGCACTTTTC 60.238 38.462 0.00 0.00 0.00 2.29
531 532 5.580691 GCTTTCTTTGTAAACCAGCACTTTT 59.419 36.000 0.00 0.00 0.00 2.27
532 533 5.109210 GCTTTCTTTGTAAACCAGCACTTT 58.891 37.500 0.00 0.00 0.00 2.66
533 534 4.159506 TGCTTTCTTTGTAAACCAGCACTT 59.840 37.500 0.00 0.00 0.00 3.16
534 535 3.699038 TGCTTTCTTTGTAAACCAGCACT 59.301 39.130 0.00 0.00 0.00 4.40
535 536 4.040445 TGCTTTCTTTGTAAACCAGCAC 57.960 40.909 0.00 0.00 0.00 4.40
536 537 4.501229 CCATGCTTTCTTTGTAAACCAGCA 60.501 41.667 0.00 0.00 0.00 4.41
537 538 3.989817 CCATGCTTTCTTTGTAAACCAGC 59.010 43.478 0.00 0.00 0.00 4.85
538 539 5.241506 TCTCCATGCTTTCTTTGTAAACCAG 59.758 40.000 0.00 0.00 0.00 4.00
539 540 5.136828 TCTCCATGCTTTCTTTGTAAACCA 58.863 37.500 0.00 0.00 0.00 3.67
540 541 5.705609 TCTCCATGCTTTCTTTGTAAACC 57.294 39.130 0.00 0.00 0.00 3.27
541 542 6.970484 TCTTCTCCATGCTTTCTTTGTAAAC 58.030 36.000 0.00 0.00 0.00 2.01
542 543 7.581213 TTCTTCTCCATGCTTTCTTTGTAAA 57.419 32.000 0.00 0.00 0.00 2.01
543 544 7.581213 TTTCTTCTCCATGCTTTCTTTGTAA 57.419 32.000 0.00 0.00 0.00 2.41
544 545 7.581213 TTTTCTTCTCCATGCTTTCTTTGTA 57.419 32.000 0.00 0.00 0.00 2.41
545 546 6.469782 TTTTCTTCTCCATGCTTTCTTTGT 57.530 33.333 0.00 0.00 0.00 2.83
546 547 9.480053 TTTATTTTCTTCTCCATGCTTTCTTTG 57.520 29.630 0.00 0.00 0.00 2.77
548 549 9.866798 GATTTATTTTCTTCTCCATGCTTTCTT 57.133 29.630 0.00 0.00 0.00 2.52
549 550 8.473219 GGATTTATTTTCTTCTCCATGCTTTCT 58.527 33.333 0.00 0.00 0.00 2.52
550 551 7.433425 CGGATTTATTTTCTTCTCCATGCTTTC 59.567 37.037 0.00 0.00 0.00 2.62
551 552 7.093771 ACGGATTTATTTTCTTCTCCATGCTTT 60.094 33.333 0.00 0.00 0.00 3.51
552 553 6.378280 ACGGATTTATTTTCTTCTCCATGCTT 59.622 34.615 0.00 0.00 0.00 3.91
553 554 5.888161 ACGGATTTATTTTCTTCTCCATGCT 59.112 36.000 0.00 0.00 0.00 3.79
554 555 6.136541 ACGGATTTATTTTCTTCTCCATGC 57.863 37.500 0.00 0.00 0.00 4.06
555 556 8.662781 TCTACGGATTTATTTTCTTCTCCATG 57.337 34.615 0.00 0.00 0.00 3.66
556 557 9.681062 TTTCTACGGATTTATTTTCTTCTCCAT 57.319 29.630 0.00 0.00 0.00 3.41
557 558 9.509956 TTTTCTACGGATTTATTTTCTTCTCCA 57.490 29.630 0.00 0.00 0.00 3.86
567 568 9.627123 TCATCATCCTTTTTCTACGGATTTATT 57.373 29.630 0.00 0.00 35.43 1.40
568 569 9.277783 CTCATCATCCTTTTTCTACGGATTTAT 57.722 33.333 0.00 0.00 35.43 1.40
569 570 8.482943 TCTCATCATCCTTTTTCTACGGATTTA 58.517 33.333 0.00 0.00 35.43 1.40
570 571 7.338710 TCTCATCATCCTTTTTCTACGGATTT 58.661 34.615 0.00 0.00 35.43 2.17
571 572 6.889198 TCTCATCATCCTTTTTCTACGGATT 58.111 36.000 0.00 0.00 35.43 3.01
572 573 6.485830 TCTCATCATCCTTTTTCTACGGAT 57.514 37.500 0.00 0.00 38.03 4.18
573 574 5.932619 TCTCATCATCCTTTTTCTACGGA 57.067 39.130 0.00 0.00 0.00 4.69
574 575 5.525378 CCTTCTCATCATCCTTTTTCTACGG 59.475 44.000 0.00 0.00 0.00 4.02
575 576 6.256757 GTCCTTCTCATCATCCTTTTTCTACG 59.743 42.308 0.00 0.00 0.00 3.51
576 577 7.106239 TGTCCTTCTCATCATCCTTTTTCTAC 58.894 38.462 0.00 0.00 0.00 2.59
577 578 7.257790 TGTCCTTCTCATCATCCTTTTTCTA 57.742 36.000 0.00 0.00 0.00 2.10
578 579 6.131972 TGTCCTTCTCATCATCCTTTTTCT 57.868 37.500 0.00 0.00 0.00 2.52
579 580 6.824305 TTGTCCTTCTCATCATCCTTTTTC 57.176 37.500 0.00 0.00 0.00 2.29
580 581 7.601705 TTTTGTCCTTCTCATCATCCTTTTT 57.398 32.000 0.00 0.00 0.00 1.94
581 582 7.601705 TTTTTGTCCTTCTCATCATCCTTTT 57.398 32.000 0.00 0.00 0.00 2.27
619 620 5.930837 TTCACCACTTTCATCTGGTTTTT 57.069 34.783 0.00 0.00 38.84 1.94
620 621 5.930837 TTTCACCACTTTCATCTGGTTTT 57.069 34.783 0.00 0.00 38.84 2.43
621 622 5.598005 TCATTTCACCACTTTCATCTGGTTT 59.402 36.000 0.00 0.00 38.84 3.27
622 623 5.139727 TCATTTCACCACTTTCATCTGGTT 58.860 37.500 0.00 0.00 38.84 3.67
623 624 4.728772 TCATTTCACCACTTTCATCTGGT 58.271 39.130 0.00 0.00 41.78 4.00
624 625 5.710513 TTCATTTCACCACTTTCATCTGG 57.289 39.130 0.00 0.00 0.00 3.86
656 657 4.570772 TGAAGCAGTTAATAGGATTGCGTC 59.429 41.667 4.22 4.22 41.49 5.19
657 658 4.513442 TGAAGCAGTTAATAGGATTGCGT 58.487 39.130 0.00 0.00 39.63 5.24
658 659 5.679734 ATGAAGCAGTTAATAGGATTGCG 57.320 39.130 0.00 0.00 39.63 4.85
659 660 9.801873 TTTTAATGAAGCAGTTAATAGGATTGC 57.198 29.630 0.00 0.00 35.09 3.56
684 685 9.918630 CAGATTTTGACACCTGAATTTCTATTT 57.081 29.630 0.00 0.00 0.00 1.40
685 686 9.300681 TCAGATTTTGACACCTGAATTTCTATT 57.699 29.630 0.00 0.00 33.26 1.73
686 687 8.868522 TCAGATTTTGACACCTGAATTTCTAT 57.131 30.769 0.00 0.00 33.26 1.98
701 702 4.111375 GAGGCTACTCGTCAGATTTTGA 57.889 45.455 0.00 0.00 33.35 2.69
713 714 1.337118 CTCCCATCCTGAGGCTACTC 58.663 60.000 0.00 0.00 44.23 2.59
714 715 0.105246 CCTCCCATCCTGAGGCTACT 60.105 60.000 0.00 0.00 42.75 2.57
715 716 2.446512 CCTCCCATCCTGAGGCTAC 58.553 63.158 0.00 0.00 42.75 3.58
720 721 0.324285 GCATAGCCTCCCATCCTGAG 59.676 60.000 0.00 0.00 0.00 3.35
721 722 1.475169 CGCATAGCCTCCCATCCTGA 61.475 60.000 0.00 0.00 0.00 3.86
722 723 1.004080 CGCATAGCCTCCCATCCTG 60.004 63.158 0.00 0.00 0.00 3.86
723 724 2.888447 GCGCATAGCCTCCCATCCT 61.888 63.158 0.30 0.00 40.81 3.24
724 725 2.359230 GCGCATAGCCTCCCATCC 60.359 66.667 0.30 0.00 40.81 3.51
734 735 1.496060 TATGGGGATAGGGCGCATAG 58.504 55.000 10.83 0.00 0.00 2.23
735 736 1.557832 GTTATGGGGATAGGGCGCATA 59.442 52.381 10.83 0.96 0.00 3.14
736 737 0.328258 GTTATGGGGATAGGGCGCAT 59.672 55.000 10.83 0.00 0.00 4.73
737 738 1.057275 TGTTATGGGGATAGGGCGCA 61.057 55.000 10.83 0.00 0.00 6.09
738 739 0.605589 GTGTTATGGGGATAGGGCGC 60.606 60.000 0.00 0.00 0.00 6.53
739 740 0.036306 GGTGTTATGGGGATAGGGCG 59.964 60.000 0.00 0.00 0.00 6.13
740 741 0.404426 GGGTGTTATGGGGATAGGGC 59.596 60.000 0.00 0.00 0.00 5.19
741 742 0.690762 CGGGTGTTATGGGGATAGGG 59.309 60.000 0.00 0.00 0.00 3.53
742 743 1.724545 TCGGGTGTTATGGGGATAGG 58.275 55.000 0.00 0.00 0.00 2.57
743 744 2.436542 TGTTCGGGTGTTATGGGGATAG 59.563 50.000 0.00 0.00 0.00 2.08
744 745 2.479340 TGTTCGGGTGTTATGGGGATA 58.521 47.619 0.00 0.00 0.00 2.59
745 746 1.291109 TGTTCGGGTGTTATGGGGAT 58.709 50.000 0.00 0.00 0.00 3.85
746 747 1.210967 GATGTTCGGGTGTTATGGGGA 59.789 52.381 0.00 0.00 0.00 4.81
747 748 1.065053 TGATGTTCGGGTGTTATGGGG 60.065 52.381 0.00 0.00 0.00 4.96
748 749 2.288666 CTGATGTTCGGGTGTTATGGG 58.711 52.381 0.00 0.00 0.00 4.00
749 750 2.288666 CCTGATGTTCGGGTGTTATGG 58.711 52.381 0.00 0.00 38.13 2.74
750 751 1.670811 GCCTGATGTTCGGGTGTTATG 59.329 52.381 4.38 0.00 44.85 1.90
751 752 1.280710 TGCCTGATGTTCGGGTGTTAT 59.719 47.619 4.38 0.00 44.85 1.89
752 753 0.687920 TGCCTGATGTTCGGGTGTTA 59.312 50.000 4.38 0.00 44.85 2.41
753 754 0.889186 GTGCCTGATGTTCGGGTGTT 60.889 55.000 4.38 0.00 44.85 3.32
754 755 1.302511 GTGCCTGATGTTCGGGTGT 60.303 57.895 4.38 0.00 44.85 4.16
755 756 2.040544 GGTGCCTGATGTTCGGGTG 61.041 63.158 4.38 0.00 44.85 4.61
756 757 2.351276 GGTGCCTGATGTTCGGGT 59.649 61.111 4.38 0.00 44.85 5.28
757 758 1.746615 CTGGTGCCTGATGTTCGGG 60.747 63.158 0.00 0.00 45.82 5.14
758 759 2.401766 GCTGGTGCCTGATGTTCGG 61.402 63.158 0.00 0.00 0.00 4.30
759 760 1.672030 TGCTGGTGCCTGATGTTCG 60.672 57.895 0.00 0.00 38.71 3.95
760 761 0.890542 TGTGCTGGTGCCTGATGTTC 60.891 55.000 0.00 0.00 38.71 3.18
761 762 0.251474 ATGTGCTGGTGCCTGATGTT 60.251 50.000 0.00 0.00 38.71 2.71
762 763 0.963856 CATGTGCTGGTGCCTGATGT 60.964 55.000 0.00 0.00 38.71 3.06
763 764 1.663379 CCATGTGCTGGTGCCTGATG 61.663 60.000 0.00 0.00 40.49 3.07
764 765 1.379443 CCATGTGCTGGTGCCTGAT 60.379 57.895 0.00 0.00 40.49 2.90
765 766 2.034532 CCATGTGCTGGTGCCTGA 59.965 61.111 0.00 0.00 40.49 3.86
781 782 2.607038 GGACTTTCACGTTGGATTTGCC 60.607 50.000 0.00 0.00 37.10 4.52
782 783 2.607038 GGGACTTTCACGTTGGATTTGC 60.607 50.000 0.00 0.00 0.00 3.68
783 784 2.350388 CGGGACTTTCACGTTGGATTTG 60.350 50.000 0.00 0.00 38.72 2.32
784 785 1.877443 CGGGACTTTCACGTTGGATTT 59.123 47.619 0.00 0.00 38.72 2.17
785 786 1.519408 CGGGACTTTCACGTTGGATT 58.481 50.000 0.00 0.00 38.72 3.01
786 787 3.226884 CGGGACTTTCACGTTGGAT 57.773 52.632 0.00 0.00 38.72 3.41
787 788 4.762825 CGGGACTTTCACGTTGGA 57.237 55.556 0.00 0.00 38.72 3.53
793 794 3.383761 TCTAAACGAACGGGACTTTCAC 58.616 45.455 0.00 0.00 36.31 3.18
794 795 3.731652 TCTAAACGAACGGGACTTTCA 57.268 42.857 0.00 0.00 36.31 2.69
795 796 5.602458 AATTCTAAACGAACGGGACTTTC 57.398 39.130 0.00 0.00 33.72 2.62
796 797 6.381481 AAAATTCTAAACGAACGGGACTTT 57.619 33.333 0.00 0.00 33.72 2.66
797 798 5.333568 CGAAAATTCTAAACGAACGGGACTT 60.334 40.000 0.00 0.00 33.72 3.01
798 799 4.151157 CGAAAATTCTAAACGAACGGGACT 59.849 41.667 0.00 0.00 33.72 3.85
799 800 4.388790 CGAAAATTCTAAACGAACGGGAC 58.611 43.478 0.00 0.00 33.72 4.46
800 801 3.120580 GCGAAAATTCTAAACGAACGGGA 60.121 43.478 0.00 0.00 33.72 5.14
801 802 3.158268 GCGAAAATTCTAAACGAACGGG 58.842 45.455 0.00 0.00 33.72 5.28
802 803 3.158268 GGCGAAAATTCTAAACGAACGG 58.842 45.455 0.00 0.00 33.72 4.44
803 804 2.830480 CGGCGAAAATTCTAAACGAACG 59.170 45.455 0.00 0.00 33.72 3.95
804 805 3.158268 CCGGCGAAAATTCTAAACGAAC 58.842 45.455 9.30 0.00 33.72 3.95
805 806 2.160022 CCCGGCGAAAATTCTAAACGAA 59.840 45.455 9.30 0.00 35.78 3.85
806 807 1.733360 CCCGGCGAAAATTCTAAACGA 59.267 47.619 9.30 0.00 0.00 3.85
807 808 1.792632 GCCCGGCGAAAATTCTAAACG 60.793 52.381 9.30 0.00 0.00 3.60
808 809 1.200484 TGCCCGGCGAAAATTCTAAAC 59.800 47.619 9.30 0.00 0.00 2.01
809 810 1.200484 GTGCCCGGCGAAAATTCTAAA 59.800 47.619 9.30 0.00 0.00 1.85
810 811 0.806241 GTGCCCGGCGAAAATTCTAA 59.194 50.000 9.30 0.00 0.00 2.10
811 812 1.027792 GGTGCCCGGCGAAAATTCTA 61.028 55.000 9.30 0.00 0.00 2.10
812 813 2.340328 GGTGCCCGGCGAAAATTCT 61.340 57.895 9.30 0.00 0.00 2.40
813 814 2.180769 GGTGCCCGGCGAAAATTC 59.819 61.111 9.30 0.00 0.00 2.17
814 815 2.282887 AGGTGCCCGGCGAAAATT 60.283 55.556 9.30 0.00 0.00 1.82
815 816 2.750237 GAGGTGCCCGGCGAAAAT 60.750 61.111 9.30 0.00 0.00 1.82
832 833 3.807538 AGCAGCGGCAAAGCATCG 61.808 61.111 12.44 0.00 44.61 3.84
834 835 2.986306 GACAGCAGCGGCAAAGCAT 61.986 57.895 12.44 0.00 44.61 3.79
870 871 0.253044 CGGCTTTGGATGAGGGAAGA 59.747 55.000 0.00 0.00 0.00 2.87
907 920 0.862283 GCTAGCTACGTGACGTGAGC 60.862 60.000 22.16 22.45 41.39 4.26
929 942 1.613630 GGGAGTGGCAGGAGGAAGA 60.614 63.158 0.00 0.00 0.00 2.87
950 966 1.077716 GGATCTTGTTGGACCGGGG 60.078 63.158 6.32 0.00 0.00 5.73
970 986 2.027745 CAGCCTGGTTTCTTGAGCTAGA 60.028 50.000 0.00 0.00 0.00 2.43
1340 1362 1.729470 GAGCCTGATCCGCTCGAAGA 61.729 60.000 14.16 0.00 43.04 2.87
1723 1766 4.977741 TTTACTACTGAAAACGGCGAAG 57.022 40.909 16.62 5.33 0.00 3.79
1724 1767 5.523188 TCTTTTTACTACTGAAAACGGCGAA 59.477 36.000 16.62 0.00 0.00 4.70
1725 1768 5.049167 TCTTTTTACTACTGAAAACGGCGA 58.951 37.500 16.62 0.00 0.00 5.54
1726 1769 5.050567 ACTCTTTTTACTACTGAAAACGGCG 60.051 40.000 4.80 4.80 0.00 6.46
1727 1770 6.296365 ACTCTTTTTACTACTGAAAACGGC 57.704 37.500 0.00 0.00 0.00 5.68
1728 1771 9.038803 AGTAACTCTTTTTACTACTGAAAACGG 57.961 33.333 0.00 0.00 39.95 4.44
1729 1772 9.845305 CAGTAACTCTTTTTACTACTGAAAACG 57.155 33.333 2.12 0.00 39.77 3.60
1742 1785 9.797556 AAAAAGCGAAATACAGTAACTCTTTTT 57.202 25.926 13.93 13.93 36.79 1.94
1780 1823 3.329929 AGTGGGGACAATCTACGAAAC 57.670 47.619 0.00 0.00 46.06 2.78
1781 1824 4.069304 CAAAGTGGGGACAATCTACGAAA 58.931 43.478 0.00 0.00 46.06 3.46
1784 1827 2.742053 CACAAAGTGGGGACAATCTACG 59.258 50.000 0.00 0.00 46.06 3.51
1806 1849 5.551760 AATGATCTAAGTGGAAAAGCACG 57.448 39.130 0.00 0.00 0.00 5.34
1815 1858 4.718961 CAACCCCCTAATGATCTAAGTGG 58.281 47.826 0.00 0.00 0.00 4.00
1829 1872 0.261696 ACAGTGAAAAGCAACCCCCT 59.738 50.000 0.00 0.00 0.00 4.79
1833 1876 0.380378 TGCGACAGTGAAAAGCAACC 59.620 50.000 0.00 0.00 34.66 3.77
1926 1969 2.879026 AGGAAAAAGTCAACGAGAAGGC 59.121 45.455 0.00 0.00 0.00 4.35
1928 1971 4.023963 GGGAAGGAAAAAGTCAACGAGAAG 60.024 45.833 0.00 0.00 0.00 2.85
1934 1977 3.554960 GGCATGGGAAGGAAAAAGTCAAC 60.555 47.826 0.00 0.00 0.00 3.18
1937 1980 1.550524 GGGCATGGGAAGGAAAAAGTC 59.449 52.381 0.00 0.00 0.00 3.01
1938 1981 1.644509 GGGCATGGGAAGGAAAAAGT 58.355 50.000 0.00 0.00 0.00 2.66
1953 1996 6.872585 AATAAATCAAAGAATGAAGGGGCA 57.127 33.333 0.00 0.00 42.54 5.36
2077 2853 2.951457 CATTGAGTCAATGCATGGCA 57.049 45.000 28.11 0.00 43.38 4.92
2110 2886 6.857964 GCTTTTCGATTTGACTGAGATTTTGA 59.142 34.615 0.00 0.00 0.00 2.69
2121 2897 3.057946 AGGCAAGAGCTTTTCGATTTGAC 60.058 43.478 0.00 0.00 41.70 3.18
2134 2911 1.271379 TGGGTAGTGAAAGGCAAGAGC 60.271 52.381 0.00 0.00 41.10 4.09
2135 2912 2.859165 TGGGTAGTGAAAGGCAAGAG 57.141 50.000 0.00 0.00 0.00 2.85
2209 2986 6.753913 TTATTGAGCATGGATAGGAGAAGT 57.246 37.500 0.00 0.00 0.00 3.01
2423 3317 3.087906 GCGGAGAAGGCCCCCTTA 61.088 66.667 0.00 0.00 44.82 2.69
2450 3344 1.887854 TCGAATCAAGGTACCACGACA 59.112 47.619 15.94 0.00 0.00 4.35
2613 3555 2.290896 CCCAAGATTGAGGTAGCCACAA 60.291 50.000 0.91 0.91 38.35 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.