Multiple sequence alignment - TraesCS3D01G081500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G081500 chr3D 100.000 3489 0 0 1 3489 40791527 40795015 0.000000e+00 6444.0
1 TraesCS3D01G081500 chr3D 85.227 792 83 23 2487 3274 519905816 519905055 0.000000e+00 784.0
2 TraesCS3D01G081500 chr3D 85.890 489 51 12 2792 3274 548820609 548820133 4.020000e-139 505.0
3 TraesCS3D01G081500 chr3D 82.364 550 75 14 2788 3321 98568948 98569491 3.170000e-125 459.0
4 TraesCS3D01G081500 chr3D 92.953 298 21 0 2491 2788 548820945 548820648 5.350000e-118 435.0
5 TraesCS3D01G081500 chr3D 77.961 304 47 16 1991 2280 548821271 548820974 4.630000e-39 172.0
6 TraesCS3D01G081500 chr3D 86.111 108 13 2 325 431 3191362 3191468 7.910000e-22 115.0
7 TraesCS3D01G081500 chr3D 86.792 53 1 5 3276 3328 500888528 500888574 2.000000e-03 54.7
8 TraesCS3D01G081500 chr3B 89.182 795 45 19 1006 1775 64500278 64499500 0.000000e+00 953.0
9 TraesCS3D01G081500 chr3B 92.157 204 6 4 805 1000 64500575 64500374 2.650000e-71 279.0
10 TraesCS3D01G081500 chr3B 83.828 303 34 12 1984 2279 793397261 793397555 1.230000e-69 274.0
11 TraesCS3D01G081500 chr3B 83.168 303 36 12 1984 2279 792342629 792342335 2.670000e-66 263.0
12 TraesCS3D01G081500 chr3B 83.168 303 36 12 1984 2279 792432950 792432656 2.670000e-66 263.0
13 TraesCS3D01G081500 chr3B 79.456 331 47 16 4 324 64501760 64501441 7.580000e-52 215.0
14 TraesCS3D01G081500 chr3B 78.667 300 44 11 1993 2280 732872471 732872762 7.690000e-42 182.0
15 TraesCS3D01G081500 chr3B 85.593 118 16 1 331 448 257036365 257036249 4.730000e-24 122.0
16 TraesCS3D01G081500 chr3B 92.593 81 3 2 1771 1851 64499395 64499318 2.850000e-21 113.0
17 TraesCS3D01G081500 chr1D 86.653 487 61 2 2789 3274 204801544 204802027 1.430000e-148 536.0
18 TraesCS3D01G081500 chr1D 77.346 309 49 14 1991 2280 204800899 204801205 2.790000e-36 163.0
19 TraesCS3D01G081500 chr1D 82.677 127 22 0 329 455 3981846 3981972 2.850000e-21 113.0
20 TraesCS3D01G081500 chr1D 84.466 103 14 2 325 427 302815986 302815886 2.220000e-17 100.0
21 TraesCS3D01G081500 chr1D 80.328 122 23 1 325 445 73669190 73669311 1.330000e-14 91.6
22 TraesCS3D01G081500 chr1D 81.651 109 19 1 353 461 334339301 334339408 4.800000e-14 89.8
23 TraesCS3D01G081500 chr5D 86.094 489 59 6 2788 3274 469478739 469479220 5.160000e-143 518.0
24 TraesCS3D01G081500 chr5D 85.393 445 55 9 2788 3228 397229348 397229786 1.480000e-123 453.0
25 TraesCS3D01G081500 chr5D 95.337 193 9 0 2281 2473 420900876 420901068 1.220000e-79 307.0
26 TraesCS3D01G081500 chr5D 86.111 288 36 3 1995 2280 446483540 446483825 1.220000e-79 307.0
27 TraesCS3D01G081500 chr1A 86.395 441 56 3 2788 3228 481507565 481507129 2.440000e-131 479.0
28 TraesCS3D01G081500 chr1A 90.852 317 28 1 2472 2788 481507915 481507600 1.160000e-114 424.0
29 TraesCS3D01G081500 chr1A 85.859 99 13 1 325 423 41869518 41869615 1.710000e-18 104.0
30 TraesCS3D01G081500 chr7D 93.060 317 19 1 2472 2788 115135897 115136210 8.820000e-126 460.0
31 TraesCS3D01G081500 chr7D 94.819 193 10 0 2279 2471 565658675 565658867 5.660000e-78 302.0
32 TraesCS3D01G081500 chr7D 84.932 292 32 5 1988 2271 22541359 22541646 5.700000e-73 285.0
33 TraesCS3D01G081500 chr7D 84.091 132 19 2 325 456 529621534 529621663 3.660000e-25 126.0
34 TraesCS3D01G081500 chr1B 83.943 492 68 9 2788 3274 256199804 256199319 8.820000e-126 460.0
35 TraesCS3D01G081500 chr6D 85.650 446 53 7 2788 3228 355864539 355864978 3.170000e-125 459.0
36 TraesCS3D01G081500 chr6D 95.361 194 9 0 2278 2471 418875376 418875183 3.380000e-80 309.0
37 TraesCS3D01G081500 chr6D 85.000 120 16 2 337 456 429826945 429826828 1.700000e-23 121.0
38 TraesCS3D01G081500 chr6D 81.818 132 21 2 325 456 455911173 455911045 1.320000e-19 108.0
39 TraesCS3D01G081500 chr6D 82.979 94 15 1 325 417 455754943 455755036 2.230000e-12 84.2
40 TraesCS3D01G081500 chr6D 100.000 28 0 0 3297 3324 420556825 420556798 6.000000e-03 52.8
41 TraesCS3D01G081500 chr4B 92.114 317 22 1 2472 2788 291849836 291849523 8.890000e-121 444.0
42 TraesCS3D01G081500 chr4B 81.150 313 33 8 1993 2280 5834663 5834352 9.740000e-56 228.0
43 TraesCS3D01G081500 chr4B 96.970 33 0 1 3296 3328 640828459 640828490 2.000000e-03 54.7
44 TraesCS3D01G081500 chr2D 92.114 317 20 4 2473 2788 638151341 638151653 3.200000e-120 442.0
45 TraesCS3D01G081500 chr2D 92.953 298 21 0 2491 2788 112554306 112554009 5.350000e-118 435.0
46 TraesCS3D01G081500 chr2D 85.039 127 16 3 331 456 95650530 95650654 3.660000e-25 126.0
47 TraesCS3D01G081500 chr3A 91.798 317 24 1 2472 2788 631859096 631859410 1.150000e-119 440.0
48 TraesCS3D01G081500 chr3A 95.288 191 9 0 2281 2471 693067052 693066862 1.570000e-78 303.0
49 TraesCS3D01G081500 chr3A 100.000 37 0 0 1 37 52560832 52560868 6.250000e-08 69.4
50 TraesCS3D01G081500 chr4D 90.938 320 24 2 2472 2788 44186297 44186614 3.220000e-115 425.0
51 TraesCS3D01G081500 chr4D 85.606 132 18 1 325 456 167880811 167880681 1.690000e-28 137.0
52 TraesCS3D01G081500 chr4D 80.000 130 26 0 327 456 471425818 471425689 2.870000e-16 97.1
53 TraesCS3D01G081500 chr4D 100.000 28 0 0 3302 3329 349137094 349137121 6.000000e-03 52.8
54 TraesCS3D01G081500 chr4A 97.449 196 5 0 2277 2472 136617829 136618024 5.580000e-88 335.0
55 TraesCS3D01G081500 chr4A 97.297 185 5 0 2287 2471 564145153 564144969 7.270000e-82 315.0
56 TraesCS3D01G081500 chr4A 90.698 43 1 3 3287 3328 743614965 743614925 2.000000e-03 54.7
57 TraesCS3D01G081500 chr4A 100.000 28 0 0 3301 3328 690137868 690137841 6.000000e-03 52.8
58 TraesCS3D01G081500 chr2A 97.382 191 5 0 2281 2471 722564284 722564094 3.360000e-85 326.0
59 TraesCS3D01G081500 chr2A 94.146 205 12 0 2274 2478 58351086 58350882 2.610000e-81 313.0
60 TraesCS3D01G081500 chr7A 95.812 191 8 0 2281 2471 686003967 686003777 3.380000e-80 309.0
61 TraesCS3D01G081500 chrUn 83.498 303 35 12 1984 2279 154950672 154950966 5.740000e-68 268.0
62 TraesCS3D01G081500 chrUn 83.498 303 35 12 1984 2279 155034729 155035023 5.740000e-68 268.0
63 TraesCS3D01G081500 chrUn 84.127 126 19 1 325 450 240285632 240285756 1.700000e-23 121.0
64 TraesCS3D01G081500 chr6B 84.980 253 27 8 1993 2239 331037504 331037751 2.690000e-61 246.0
65 TraesCS3D01G081500 chr6B 83.088 136 18 4 325 460 115516500 115516630 6.120000e-23 119.0
66 TraesCS3D01G081500 chr6B 83.206 131 19 2 325 455 34214852 34214725 2.200000e-22 117.0
67 TraesCS3D01G081500 chr7B 84.962 133 18 2 325 456 86519542 86519411 2.180000e-27 134.0
68 TraesCS3D01G081500 chr2B 83.582 134 18 4 325 456 204588149 204588280 4.730000e-24 122.0
69 TraesCS3D01G081500 chr2B 97.143 35 0 1 3296 3330 799138067 799138100 1.350000e-04 58.4
70 TraesCS3D01G081500 chr5A 84.746 118 17 1 325 442 708633709 708633825 2.200000e-22 117.0
71 TraesCS3D01G081500 chr5B 87.129 101 13 0 325 425 63243842 63243742 7.910000e-22 115.0
72 TraesCS3D01G081500 chr5B 81.061 132 23 2 325 456 579007843 579007972 1.710000e-18 104.0
73 TraesCS3D01G081500 chr6A 86.275 102 14 0 325 426 575084443 575084544 1.020000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G081500 chr3D 40791527 40795015 3488 False 6444.000000 6444 100.000000 1 3489 1 chr3D.!!$F2 3488
1 TraesCS3D01G081500 chr3D 519905055 519905816 761 True 784.000000 784 85.227000 2487 3274 1 chr3D.!!$R1 787
2 TraesCS3D01G081500 chr3D 98568948 98569491 543 False 459.000000 459 82.364000 2788 3321 1 chr3D.!!$F3 533
3 TraesCS3D01G081500 chr3D 548820133 548821271 1138 True 370.666667 505 85.601333 1991 3274 3 chr3D.!!$R2 1283
4 TraesCS3D01G081500 chr3B 64499318 64501760 2442 True 390.000000 953 88.347000 4 1851 4 chr3B.!!$R4 1847
5 TraesCS3D01G081500 chr1D 204800899 204802027 1128 False 349.500000 536 81.999500 1991 3274 2 chr1D.!!$F4 1283
6 TraesCS3D01G081500 chr1A 481507129 481507915 786 True 451.500000 479 88.623500 2472 3228 2 chr1A.!!$R1 756

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
427 512 0.043485 TCATAGGGGTAGGGTGTGCA 59.957 55.0 0.0 0.0 0.00 4.57 F
478 563 0.099968 GTCTGCATCCGTAGCGTGTA 59.900 55.0 0.0 0.0 33.85 2.90 F
2293 2973 0.107643 TGCAACCAGTGACGATTCCA 59.892 50.0 0.0 0.0 0.00 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1866 2499 0.108804 TTAGCCCTCAAACGCGAGAG 60.109 55.0 15.93 16.55 34.79 3.20 R
2435 3115 0.044855 AGGACATTGGAGGGTAGGCT 59.955 55.0 0.00 0.00 0.00 4.58 R
3403 4215 0.255890 CCAGTTGGAATCCCCGTGAT 59.744 55.0 0.00 0.00 37.93 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.356000 CCAGGGTAGGTAAATGAATTTTTGTA 57.644 34.615 0.00 0.00 0.00 2.41
26 27 8.466798 CCAGGGTAGGTAAATGAATTTTTGTAG 58.533 37.037 0.00 0.00 0.00 2.74
27 28 9.020731 CAGGGTAGGTAAATGAATTTTTGTAGT 57.979 33.333 0.00 0.00 0.00 2.73
28 29 9.020731 AGGGTAGGTAAATGAATTTTTGTAGTG 57.979 33.333 0.00 0.00 0.00 2.74
38 41 9.553064 AATGAATTTTTGTAGTGGTTATTGCAA 57.447 25.926 0.00 0.00 0.00 4.08
46 49 5.590663 TGTAGTGGTTATTGCAAAAGACACA 59.409 36.000 21.59 11.20 0.00 3.72
50 53 5.175491 GTGGTTATTGCAAAAGACACACATG 59.825 40.000 17.36 0.00 0.00 3.21
64 67 7.346751 AGACACACATGGTCTTAATGTTTTT 57.653 32.000 0.00 0.00 42.77 1.94
258 264 5.934402 AGTTCTACTATCAACCCATTCGT 57.066 39.130 0.00 0.00 0.00 3.85
295 301 6.658188 GAGACTAGCTCATATGGTAAGGTT 57.342 41.667 2.13 0.00 43.38 3.50
301 307 6.515272 AGCTCATATGGTAAGGTTTTTGTG 57.485 37.500 2.13 0.00 0.00 3.33
324 330 2.224523 TGGAACCAGCACTCTAAGGTTG 60.225 50.000 0.00 0.00 43.94 3.77
326 332 3.330267 GAACCAGCACTCTAAGGTTGAG 58.670 50.000 0.00 0.00 43.94 3.02
327 333 2.609747 ACCAGCACTCTAAGGTTGAGA 58.390 47.619 0.00 0.00 35.66 3.27
328 334 2.300437 ACCAGCACTCTAAGGTTGAGAC 59.700 50.000 0.00 0.00 35.66 3.36
329 335 2.300152 CCAGCACTCTAAGGTTGAGACA 59.700 50.000 0.00 0.00 35.66 3.41
335 420 4.020218 CACTCTAAGGTTGAGACATTCCCA 60.020 45.833 0.00 0.00 35.66 4.37
337 422 5.104735 ACTCTAAGGTTGAGACATTCCCATC 60.105 44.000 0.00 0.00 35.66 3.51
355 440 2.577593 GACTACGGAGGCGCCTTT 59.422 61.111 33.34 20.32 0.00 3.11
356 441 1.810030 GACTACGGAGGCGCCTTTG 60.810 63.158 33.34 27.18 0.00 2.77
366 451 2.251642 GCGCCTTTGGTGACTTCGT 61.252 57.895 0.00 0.00 34.74 3.85
371 456 2.095718 GCCTTTGGTGACTTCGTCAATC 60.096 50.000 0.00 0.00 44.49 2.67
373 458 3.433615 CCTTTGGTGACTTCGTCAATCTC 59.566 47.826 0.00 0.00 44.49 2.75
384 469 6.867550 ACTTCGTCAATCTCAAGATGATGTA 58.132 36.000 0.00 0.00 36.79 2.29
385 470 6.754209 ACTTCGTCAATCTCAAGATGATGTAC 59.246 38.462 0.00 0.00 36.79 2.90
386 471 5.592054 TCGTCAATCTCAAGATGATGTACC 58.408 41.667 0.00 0.00 34.49 3.34
388 473 4.747108 GTCAATCTCAAGATGATGTACCGG 59.253 45.833 0.00 0.00 34.49 5.28
391 476 2.766263 TCTCAAGATGATGTACCGGCTT 59.234 45.455 0.00 0.00 0.00 4.35
392 477 3.958147 TCTCAAGATGATGTACCGGCTTA 59.042 43.478 0.00 0.00 0.00 3.09
400 485 2.642139 TGTACCGGCTTAGTCTTTCG 57.358 50.000 0.00 0.00 0.00 3.46
401 486 1.203052 TGTACCGGCTTAGTCTTTCGG 59.797 52.381 0.00 0.00 45.42 4.30
405 490 0.531200 CGGCTTAGTCTTTCGGAGGT 59.469 55.000 0.00 0.00 0.00 3.85
409 494 3.449632 GCTTAGTCTTTCGGAGGTGATC 58.550 50.000 0.00 0.00 0.00 2.92
411 496 4.442192 GCTTAGTCTTTCGGAGGTGATCAT 60.442 45.833 0.00 0.00 0.00 2.45
413 498 4.927978 AGTCTTTCGGAGGTGATCATAG 57.072 45.455 0.00 0.00 0.00 2.23
415 500 2.965831 TCTTTCGGAGGTGATCATAGGG 59.034 50.000 0.00 0.00 0.00 3.53
423 508 1.978580 GGTGATCATAGGGGTAGGGTG 59.021 57.143 0.00 0.00 0.00 4.61
426 511 1.348036 GATCATAGGGGTAGGGTGTGC 59.652 57.143 0.00 0.00 0.00 4.57
427 512 0.043485 TCATAGGGGTAGGGTGTGCA 59.957 55.000 0.00 0.00 0.00 4.57
430 515 1.632018 TAGGGGTAGGGTGTGCATGC 61.632 60.000 11.82 11.82 0.00 4.06
431 516 2.677228 GGGTAGGGTGTGCATGCT 59.323 61.111 20.33 0.00 0.00 3.79
451 536 5.005740 TGCTTGCATTCATAAGAGTGAGTT 58.994 37.500 0.00 0.00 33.67 3.01
452 537 5.474532 TGCTTGCATTCATAAGAGTGAGTTT 59.525 36.000 0.00 0.00 33.67 2.66
454 539 7.337689 TGCTTGCATTCATAAGAGTGAGTTTAT 59.662 33.333 0.00 0.00 33.67 1.40
465 550 3.987868 GAGTGAGTTTATGAACGTCTGCA 59.012 43.478 0.00 0.00 40.75 4.41
468 553 3.932710 TGAGTTTATGAACGTCTGCATCC 59.067 43.478 0.00 0.00 40.75 3.51
470 555 2.665649 TTATGAACGTCTGCATCCGT 57.334 45.000 5.09 5.09 39.32 4.69
472 557 2.209838 ATGAACGTCTGCATCCGTAG 57.790 50.000 10.69 0.00 36.04 3.51
473 558 0.457853 TGAACGTCTGCATCCGTAGC 60.458 55.000 10.69 7.42 36.04 3.58
478 563 0.099968 GTCTGCATCCGTAGCGTGTA 59.900 55.000 0.00 0.00 33.85 2.90
486 571 4.377635 GCATCCGTAGCGTGTAAAGAAAAA 60.378 41.667 0.00 0.00 0.00 1.94
488 573 4.118410 TCCGTAGCGTGTAAAGAAAAACA 58.882 39.130 0.00 0.00 0.00 2.83
489 574 4.751098 TCCGTAGCGTGTAAAGAAAAACAT 59.249 37.500 0.00 0.00 0.00 2.71
492 577 6.129561 CCGTAGCGTGTAAAGAAAAACATTTG 60.130 38.462 0.00 0.00 0.00 2.32
538 626 1.358877 GCAAAATGCATTCGGGTTCC 58.641 50.000 13.38 0.00 44.26 3.62
539 627 1.337635 GCAAAATGCATTCGGGTTCCA 60.338 47.619 13.38 0.00 44.26 3.53
540 628 2.869636 GCAAAATGCATTCGGGTTCCAA 60.870 45.455 13.38 0.00 44.26 3.53
541 629 3.397482 CAAAATGCATTCGGGTTCCAAA 58.603 40.909 13.38 0.00 0.00 3.28
543 631 3.979101 AATGCATTCGGGTTCCAAAAT 57.021 38.095 5.99 0.00 0.00 1.82
544 632 3.979101 ATGCATTCGGGTTCCAAAATT 57.021 38.095 0.00 0.00 0.00 1.82
547 635 5.413309 TGCATTCGGGTTCCAAAATTTAT 57.587 34.783 0.00 0.00 0.00 1.40
548 636 5.174395 TGCATTCGGGTTCCAAAATTTATG 58.826 37.500 0.00 0.00 0.00 1.90
549 637 5.047021 TGCATTCGGGTTCCAAAATTTATGA 60.047 36.000 0.00 0.00 0.00 2.15
550 638 5.290885 GCATTCGGGTTCCAAAATTTATGAC 59.709 40.000 0.00 0.00 0.00 3.06
553 669 6.202516 TCGGGTTCCAAAATTTATGACATC 57.797 37.500 0.00 0.00 0.00 3.06
605 724 8.130671 TCCAAAAATAGTGTAGTACTGCTAGT 57.869 34.615 12.42 5.51 40.65 2.57
627 747 5.944007 AGTAAAAACTGGATTCGTTGCCTAT 59.056 36.000 0.00 0.00 0.00 2.57
628 748 5.722021 AAAAACTGGATTCGTTGCCTATT 57.278 34.783 0.00 0.00 0.00 1.73
629 749 6.827586 AAAAACTGGATTCGTTGCCTATTA 57.172 33.333 0.00 0.00 0.00 0.98
632 752 4.694339 ACTGGATTCGTTGCCTATTAGAC 58.306 43.478 0.00 0.00 0.00 2.59
633 753 3.713288 TGGATTCGTTGCCTATTAGACG 58.287 45.455 0.00 0.00 36.89 4.18
635 755 3.982058 GGATTCGTTGCCTATTAGACGAG 59.018 47.826 6.32 0.00 44.13 4.18
646 769 7.701445 TGCCTATTAGACGAGTACTTAGTTTC 58.299 38.462 0.00 0.00 0.00 2.78
715 1070 5.954150 AGTAGTAAGTTAGTTTGATCCGGGA 59.046 40.000 0.00 0.00 0.00 5.14
759 1114 3.308595 CGCGCTGTCAATGGAACTAATTA 59.691 43.478 5.56 0.00 0.00 1.40
765 1120 6.423905 GCTGTCAATGGAACTAATTAGCGATA 59.576 38.462 12.54 0.00 0.00 2.92
773 1128 5.859648 GGAACTAATTAGCGATAGAGAGCAC 59.140 44.000 12.54 0.00 39.76 4.40
782 1137 0.393944 ATAGAGAGCACCGTGACCGA 60.394 55.000 1.65 0.00 35.63 4.69
804 1166 0.610174 AGCTGGATCAACGAGAAGCA 59.390 50.000 0.00 0.00 33.08 3.91
822 1184 3.986277 AGCAAACATTCAGGAAAGCTTG 58.014 40.909 0.00 0.00 0.00 4.01
824 1186 3.737774 GCAAACATTCAGGAAAGCTTGTC 59.262 43.478 0.00 0.00 0.00 3.18
825 1187 4.500375 GCAAACATTCAGGAAAGCTTGTCT 60.500 41.667 0.00 0.00 0.00 3.41
826 1188 5.278463 GCAAACATTCAGGAAAGCTTGTCTA 60.278 40.000 0.00 0.00 0.00 2.59
972 1375 2.507944 CATCTCTTCCCTGCCCCG 59.492 66.667 0.00 0.00 0.00 5.73
973 1376 2.770048 ATCTCTTCCCTGCCCCGG 60.770 66.667 0.00 0.00 0.00 5.73
992 1395 0.456995 GCCGGCGTGCTCTCTATATC 60.457 60.000 12.58 0.00 0.00 1.63
993 1396 1.169577 CCGGCGTGCTCTCTATATCT 58.830 55.000 6.01 0.00 0.00 1.98
994 1397 1.131504 CCGGCGTGCTCTCTATATCTC 59.868 57.143 6.01 0.00 0.00 2.75
995 1398 1.201976 CGGCGTGCTCTCTATATCTCG 60.202 57.143 0.00 0.00 0.00 4.04
997 1400 1.466950 GCGTGCTCTCTATATCTCGCT 59.533 52.381 0.00 0.00 38.09 4.93
998 1401 2.475519 GCGTGCTCTCTATATCTCGCTC 60.476 54.545 0.00 0.00 38.09 5.03
1000 1403 3.078097 GTGCTCTCTATATCTCGCTCCA 58.922 50.000 0.00 0.00 0.00 3.86
1001 1404 3.694072 GTGCTCTCTATATCTCGCTCCAT 59.306 47.826 0.00 0.00 0.00 3.41
1002 1405 4.878971 GTGCTCTCTATATCTCGCTCCATA 59.121 45.833 0.00 0.00 0.00 2.74
1004 1407 6.708502 GTGCTCTCTATATCTCGCTCCATATA 59.291 42.308 0.00 0.00 0.00 0.86
1005 1408 7.390440 GTGCTCTCTATATCTCGCTCCATATAT 59.610 40.741 0.00 0.00 0.00 0.86
1006 1409 8.598041 TGCTCTCTATATCTCGCTCCATATATA 58.402 37.037 0.00 0.00 0.00 0.86
1007 1410 9.613428 GCTCTCTATATCTCGCTCCATATATAT 57.387 37.037 0.00 0.00 0.00 0.86
1029 1523 1.354337 CGTTGCACCGACTGATGAGG 61.354 60.000 0.00 0.00 0.00 3.86
1040 1534 2.426024 GACTGATGAGGCAAGGTACGTA 59.574 50.000 0.00 0.00 0.00 3.57
1048 1542 1.066757 GGCAAGGTACGTAGCTAGGTC 59.933 57.143 26.24 18.92 33.01 3.85
1049 1543 2.022934 GCAAGGTACGTAGCTAGGTCT 58.977 52.381 26.24 11.51 33.01 3.85
1055 1549 4.102210 AGGTACGTAGCTAGGTCTCATACA 59.898 45.833 24.97 0.74 31.28 2.29
1056 1550 5.002516 GGTACGTAGCTAGGTCTCATACAT 58.997 45.833 21.62 0.00 0.00 2.29
1057 1551 6.013898 AGGTACGTAGCTAGGTCTCATACATA 60.014 42.308 24.97 0.00 31.28 2.29
1058 1552 6.822676 GGTACGTAGCTAGGTCTCATACATAT 59.177 42.308 21.62 0.00 0.00 1.78
1059 1553 7.984050 GGTACGTAGCTAGGTCTCATACATATA 59.016 40.741 21.62 0.00 0.00 0.86
1060 1554 9.545105 GTACGTAGCTAGGTCTCATACATATAT 57.455 37.037 21.62 0.00 0.00 0.86
1064 1558 8.991026 GTAGCTAGGTCTCATACATATATACGG 58.009 40.741 0.00 0.00 0.00 4.02
1088 1582 1.275010 TCGTCAAGCTCATTGGTAGCA 59.725 47.619 0.00 0.00 42.62 3.49
1229 1723 3.911698 CATGCATGCAGGCGCCAT 61.912 61.111 31.54 11.16 37.32 4.40
1230 1724 3.911698 ATGCATGCAGGCGCCATG 61.912 61.111 31.54 24.03 37.32 3.66
1249 1743 2.112190 TGCAATGGACCATTCATGCAT 58.888 42.857 22.77 0.00 31.05 3.96
1257 1751 3.056821 GGACCATTCATGCATGGATCATG 60.057 47.826 28.20 19.99 46.18 3.07
1272 1766 3.515502 GGATCATGGATGGACCGATCTAA 59.484 47.826 0.00 0.00 42.61 2.10
1273 1767 4.382470 GGATCATGGATGGACCGATCTAAG 60.382 50.000 0.00 0.00 42.61 2.18
1276 1770 4.523173 TCATGGATGGACCGATCTAAGTAC 59.477 45.833 0.00 0.00 42.61 2.73
1279 1773 5.698104 TGGATGGACCGATCTAAGTACTTA 58.302 41.667 14.52 14.52 42.61 2.24
1280 1774 5.533903 TGGATGGACCGATCTAAGTACTTAC 59.466 44.000 11.38 1.77 42.61 2.34
1281 1775 5.769162 GGATGGACCGATCTAAGTACTTACT 59.231 44.000 11.38 2.21 38.39 2.24
1282 1776 6.939163 GGATGGACCGATCTAAGTACTTACTA 59.061 42.308 11.38 3.57 34.99 1.82
1283 1777 7.611079 GGATGGACCGATCTAAGTACTTACTAT 59.389 40.741 11.38 8.12 34.99 2.12
1284 1778 9.664332 GATGGACCGATCTAAGTACTTACTATA 57.336 37.037 11.38 0.00 34.99 1.31
1296 1790 8.943909 AAGTACTTACTATAGTTGATTGGTGC 57.056 34.615 11.40 5.42 34.99 5.01
1298 1792 9.417561 AGTACTTACTATAGTTGATTGGTGCTA 57.582 33.333 11.40 0.00 34.13 3.49
1302 1796 6.406692 ACTATAGTTGATTGGTGCTACGAT 57.593 37.500 0.00 0.00 0.00 3.73
1326 1820 5.895636 GATCCATCGATCTGAGACAGTAT 57.104 43.478 0.00 0.00 41.59 2.12
1327 1821 5.639757 GATCCATCGATCTGAGACAGTATG 58.360 45.833 0.00 0.00 41.59 2.39
1355 1858 1.898574 GTTGCAGGTGTGGACAGGG 60.899 63.158 0.00 0.00 0.00 4.45
1363 1866 4.436998 GTGGACAGGGTCTCCGCG 62.437 72.222 0.00 0.00 38.33 6.46
1676 2188 0.368227 GAGCATCTTTGACGACAGCG 59.632 55.000 0.00 0.00 44.79 5.18
1715 2234 4.680702 CTCAATCATGTGACTCGATCAGT 58.319 43.478 0.00 0.00 38.28 3.41
1728 2247 5.360591 ACTCGATCAGTTGCCCTAAATAAG 58.639 41.667 0.00 0.00 26.56 1.73
1731 2250 6.177610 TCGATCAGTTGCCCTAAATAAGTTT 58.822 36.000 0.00 0.00 0.00 2.66
1737 2256 7.494625 TCAGTTGCCCTAAATAAGTTTATCTCG 59.505 37.037 0.00 0.00 0.00 4.04
1741 2260 8.882415 TGCCCTAAATAAGTTTATCTCGTTAG 57.118 34.615 0.00 0.00 0.00 2.34
1742 2261 7.929785 TGCCCTAAATAAGTTTATCTCGTTAGG 59.070 37.037 10.48 10.48 35.66 2.69
1743 2262 8.146412 GCCCTAAATAAGTTTATCTCGTTAGGA 58.854 37.037 15.39 0.00 36.73 2.94
1760 2284 7.553334 TCGTTAGGAAATTACAATCAGTAGCT 58.447 34.615 0.00 0.00 33.43 3.32
1790 2423 7.877612 TGATATTATGTATCGTGGCATTGAGTT 59.122 33.333 0.00 0.00 0.00 3.01
1791 2424 5.984233 TTATGTATCGTGGCATTGAGTTC 57.016 39.130 0.00 0.00 0.00 3.01
1792 2425 2.627945 TGTATCGTGGCATTGAGTTCC 58.372 47.619 0.00 0.00 0.00 3.62
1793 2426 2.027653 TGTATCGTGGCATTGAGTTCCA 60.028 45.455 0.00 0.00 0.00 3.53
1802 2435 2.355756 GCATTGAGTTCCATACGTGCAT 59.644 45.455 0.00 0.00 0.00 3.96
1851 2484 7.939588 GGGACCAGCTCTATATATTTGAGTTTT 59.060 37.037 13.47 2.35 0.00 2.43
1852 2485 9.343539 GGACCAGCTCTATATATTTGAGTTTTT 57.656 33.333 13.47 2.11 0.00 1.94
1854 2487 8.624776 ACCAGCTCTATATATTTGAGTTTTTGC 58.375 33.333 13.47 0.00 0.00 3.68
1855 2488 8.623903 CCAGCTCTATATATTTGAGTTTTTGCA 58.376 33.333 13.47 0.00 0.00 4.08
1872 2505 8.507249 AGTTTTTGCATATATAATTCCTCTCGC 58.493 33.333 0.00 0.00 0.00 5.03
1873 2506 6.647212 TTTGCATATATAATTCCTCTCGCG 57.353 37.500 0.00 0.00 0.00 5.87
1874 2507 5.324784 TGCATATATAATTCCTCTCGCGT 57.675 39.130 5.77 0.00 0.00 6.01
1875 2508 5.720202 TGCATATATAATTCCTCTCGCGTT 58.280 37.500 5.77 0.00 0.00 4.84
1876 2509 6.163476 TGCATATATAATTCCTCTCGCGTTT 58.837 36.000 5.77 0.00 0.00 3.60
1877 2510 6.090763 TGCATATATAATTCCTCTCGCGTTTG 59.909 38.462 5.77 0.00 0.00 2.93
1878 2511 6.310467 GCATATATAATTCCTCTCGCGTTTGA 59.690 38.462 5.77 2.38 0.00 2.69
1879 2512 7.463383 GCATATATAATTCCTCTCGCGTTTGAG 60.463 40.741 5.77 12.30 37.33 3.02
1882 2515 2.815647 CCTCTCGCGTTTGAGGGC 60.816 66.667 25.91 0.00 44.44 5.19
1883 2516 2.262915 CTCTCGCGTTTGAGGGCT 59.737 61.111 5.77 0.00 36.61 5.19
1884 2517 1.511305 CTCTCGCGTTTGAGGGCTA 59.489 57.895 5.77 0.00 36.61 3.93
1885 2518 0.108804 CTCTCGCGTTTGAGGGCTAA 60.109 55.000 5.77 0.00 36.61 3.09
1886 2519 0.535335 TCTCGCGTTTGAGGGCTAAT 59.465 50.000 5.77 0.00 36.61 1.73
1887 2520 1.066430 TCTCGCGTTTGAGGGCTAATT 60.066 47.619 5.77 0.00 36.61 1.40
1888 2521 1.737793 CTCGCGTTTGAGGGCTAATTT 59.262 47.619 5.77 0.00 32.18 1.82
1889 2522 2.156098 TCGCGTTTGAGGGCTAATTTT 58.844 42.857 5.77 0.00 0.00 1.82
1890 2523 3.336468 TCGCGTTTGAGGGCTAATTTTA 58.664 40.909 5.77 0.00 0.00 1.52
1891 2524 3.942748 TCGCGTTTGAGGGCTAATTTTAT 59.057 39.130 5.77 0.00 0.00 1.40
1892 2525 4.034742 TCGCGTTTGAGGGCTAATTTTATC 59.965 41.667 5.77 0.00 0.00 1.75
1893 2526 4.201871 CGCGTTTGAGGGCTAATTTTATCA 60.202 41.667 0.00 0.00 0.00 2.15
1894 2527 5.646606 GCGTTTGAGGGCTAATTTTATCAA 58.353 37.500 0.00 0.00 0.00 2.57
1895 2528 6.096695 GCGTTTGAGGGCTAATTTTATCAAA 58.903 36.000 0.00 0.00 35.07 2.69
1896 2529 6.756542 GCGTTTGAGGGCTAATTTTATCAAAT 59.243 34.615 0.00 0.00 38.48 2.32
1897 2530 7.277760 GCGTTTGAGGGCTAATTTTATCAAATT 59.722 33.333 3.27 3.27 43.67 1.82
1898 2531 9.796120 CGTTTGAGGGCTAATTTTATCAAATTA 57.204 29.630 5.04 5.04 41.84 1.40
1933 2566 9.752961 TTGATTAATTTGCTGTGAATATCATGG 57.247 29.630 0.00 0.00 0.00 3.66
1934 2567 8.916062 TGATTAATTTGCTGTGAATATCATGGT 58.084 29.630 0.00 0.00 0.00 3.55
1935 2568 9.188588 GATTAATTTGCTGTGAATATCATGGTG 57.811 33.333 0.00 0.00 0.00 4.17
1936 2569 4.374843 TTTGCTGTGAATATCATGGTGC 57.625 40.909 0.00 0.00 0.00 5.01
1937 2570 2.300433 TGCTGTGAATATCATGGTGCC 58.700 47.619 0.00 0.00 0.00 5.01
1938 2571 2.300433 GCTGTGAATATCATGGTGCCA 58.700 47.619 0.00 0.00 0.00 4.92
1939 2572 2.889045 GCTGTGAATATCATGGTGCCAT 59.111 45.455 0.00 0.00 37.08 4.40
1947 2580 3.507597 CATGGTGCCATGCATATGC 57.492 52.632 21.09 21.09 45.71 3.14
1958 2591 3.786656 GCATATGCACCTGAGTCCA 57.213 52.632 22.84 0.00 41.59 4.02
1959 2592 1.590932 GCATATGCACCTGAGTCCAG 58.409 55.000 22.84 0.00 41.59 3.86
1960 2593 1.590932 CATATGCACCTGAGTCCAGC 58.409 55.000 0.00 0.00 39.07 4.85
1961 2594 1.140452 CATATGCACCTGAGTCCAGCT 59.860 52.381 0.00 0.00 39.07 4.24
1962 2595 2.159179 TATGCACCTGAGTCCAGCTA 57.841 50.000 0.00 0.00 39.07 3.32
1963 2596 0.829333 ATGCACCTGAGTCCAGCTAG 59.171 55.000 0.00 0.00 39.07 3.42
1964 2597 0.251787 TGCACCTGAGTCCAGCTAGA 60.252 55.000 0.00 0.00 39.07 2.43
1965 2598 0.174617 GCACCTGAGTCCAGCTAGAC 59.825 60.000 3.86 3.86 39.07 2.59
1966 2599 0.820871 CACCTGAGTCCAGCTAGACC 59.179 60.000 8.79 1.61 39.07 3.85
1967 2600 0.409876 ACCTGAGTCCAGCTAGACCA 59.590 55.000 8.79 6.06 39.07 4.02
1968 2601 1.007721 ACCTGAGTCCAGCTAGACCAT 59.992 52.381 8.79 0.00 39.07 3.55
1969 2602 2.114616 CCTGAGTCCAGCTAGACCATT 58.885 52.381 8.79 0.00 39.07 3.16
1970 2603 2.102252 CCTGAGTCCAGCTAGACCATTC 59.898 54.545 8.79 1.12 39.07 2.67
1971 2604 1.751351 TGAGTCCAGCTAGACCATTCG 59.249 52.381 8.79 0.00 37.49 3.34
1972 2605 1.751924 GAGTCCAGCTAGACCATTCGT 59.248 52.381 8.79 0.00 37.49 3.85
1973 2606 2.166664 GAGTCCAGCTAGACCATTCGTT 59.833 50.000 8.79 0.00 37.49 3.85
1974 2607 2.567615 AGTCCAGCTAGACCATTCGTTT 59.432 45.455 8.79 0.00 37.49 3.60
1975 2608 2.673368 GTCCAGCTAGACCATTCGTTTG 59.327 50.000 0.13 0.00 0.00 2.93
1976 2609 2.565391 TCCAGCTAGACCATTCGTTTGA 59.435 45.455 0.00 0.00 0.00 2.69
1977 2610 3.007506 TCCAGCTAGACCATTCGTTTGAA 59.992 43.478 0.00 0.00 38.76 2.69
1978 2611 3.941483 CCAGCTAGACCATTCGTTTGAAT 59.059 43.478 0.00 0.00 45.70 2.57
1979 2612 5.105106 TCCAGCTAGACCATTCGTTTGAATA 60.105 40.000 0.00 0.00 42.94 1.75
1980 2613 5.235186 CCAGCTAGACCATTCGTTTGAATAG 59.765 44.000 0.00 0.00 42.94 1.73
1981 2614 5.812642 CAGCTAGACCATTCGTTTGAATAGT 59.187 40.000 0.00 0.00 42.94 2.12
1982 2615 6.313905 CAGCTAGACCATTCGTTTGAATAGTT 59.686 38.462 0.00 0.00 42.94 2.24
1983 2616 6.879458 AGCTAGACCATTCGTTTGAATAGTTT 59.121 34.615 0.00 0.00 42.94 2.66
1984 2617 8.038944 AGCTAGACCATTCGTTTGAATAGTTTA 58.961 33.333 0.00 0.00 42.94 2.01
1985 2618 8.328864 GCTAGACCATTCGTTTGAATAGTTTAG 58.671 37.037 0.00 8.64 42.94 1.85
1986 2619 9.582431 CTAGACCATTCGTTTGAATAGTTTAGA 57.418 33.333 7.76 0.00 40.30 2.10
1988 2621 9.449719 AGACCATTCGTTTGAATAGTTTAGATT 57.550 29.630 0.00 0.00 42.94 2.40
1989 2622 9.490663 GACCATTCGTTTGAATAGTTTAGATTG 57.509 33.333 0.00 0.00 42.94 2.67
1990 2623 7.968405 ACCATTCGTTTGAATAGTTTAGATTGC 59.032 33.333 0.00 0.00 42.94 3.56
1991 2624 8.184192 CCATTCGTTTGAATAGTTTAGATTGCT 58.816 33.333 0.00 0.00 42.94 3.91
1992 2625 9.559958 CATTCGTTTGAATAGTTTAGATTGCTT 57.440 29.630 0.00 0.00 42.94 3.91
2068 2701 1.741770 GCCGATCGTCTGCTTTGGT 60.742 57.895 15.09 0.00 0.00 3.67
2108 2741 0.239879 CAGCAACCGCGGTAAAATGT 59.760 50.000 34.44 12.54 45.49 2.71
2154 2787 3.307262 GCTAAAATGCAGCGCGCG 61.307 61.111 28.44 28.44 46.97 6.86
2155 2788 3.307262 CTAAAATGCAGCGCGCGC 61.307 61.111 45.10 45.10 46.97 6.86
2171 2804 1.934463 CGCTCTCGCACAAACACTT 59.066 52.632 0.00 0.00 35.30 3.16
2172 2805 0.304705 CGCTCTCGCACAAACACTTT 59.695 50.000 0.00 0.00 35.30 2.66
2173 2806 1.746760 GCTCTCGCACAAACACTTTG 58.253 50.000 0.00 0.00 45.95 2.77
2174 2807 1.330521 GCTCTCGCACAAACACTTTGA 59.669 47.619 1.75 0.00 43.53 2.69
2175 2808 2.223249 GCTCTCGCACAAACACTTTGAA 60.223 45.455 1.75 0.00 43.53 2.69
2176 2809 3.354397 CTCTCGCACAAACACTTTGAAC 58.646 45.455 1.75 0.00 43.26 3.18
2177 2810 3.006940 TCTCGCACAAACACTTTGAACT 58.993 40.909 1.75 0.00 43.26 3.01
2178 2811 4.185394 TCTCGCACAAACACTTTGAACTA 58.815 39.130 1.75 0.00 43.26 2.24
2179 2812 4.270084 TCTCGCACAAACACTTTGAACTAG 59.730 41.667 1.75 0.00 43.26 2.57
2180 2813 3.035942 CGCACAAACACTTTGAACTAGC 58.964 45.455 1.75 0.00 43.26 3.42
2181 2814 3.486708 CGCACAAACACTTTGAACTAGCA 60.487 43.478 1.75 0.00 43.26 3.49
2182 2815 4.610945 GCACAAACACTTTGAACTAGCAT 58.389 39.130 1.75 0.00 43.26 3.79
2183 2816 5.559991 CGCACAAACACTTTGAACTAGCATA 60.560 40.000 1.75 0.00 43.26 3.14
2184 2817 5.853282 GCACAAACACTTTGAACTAGCATAG 59.147 40.000 1.75 0.00 43.25 2.23
2185 2818 6.293407 GCACAAACACTTTGAACTAGCATAGA 60.293 38.462 1.75 0.00 41.40 1.98
2186 2819 7.573843 GCACAAACACTTTGAACTAGCATAGAT 60.574 37.037 1.75 0.00 41.40 1.98
2187 2820 8.935844 CACAAACACTTTGAACTAGCATAGATA 58.064 33.333 1.75 0.00 41.40 1.98
2188 2821 9.155975 ACAAACACTTTGAACTAGCATAGATAG 57.844 33.333 1.75 0.00 41.40 2.08
2189 2822 9.371136 CAAACACTTTGAACTAGCATAGATAGA 57.629 33.333 0.00 0.00 41.40 1.98
2191 2824 9.539825 AACACTTTGAACTAGCATAGATAGATG 57.460 33.333 0.00 0.00 42.77 2.90
2192 2825 8.918116 ACACTTTGAACTAGCATAGATAGATGA 58.082 33.333 0.00 0.00 42.77 2.92
2292 2972 0.517316 GTGCAACCAGTGACGATTCC 59.483 55.000 0.00 0.00 0.00 3.01
2293 2973 0.107643 TGCAACCAGTGACGATTCCA 59.892 50.000 0.00 0.00 0.00 3.53
2294 2974 1.271325 TGCAACCAGTGACGATTCCAT 60.271 47.619 0.00 0.00 0.00 3.41
2295 2975 1.812571 GCAACCAGTGACGATTCCATT 59.187 47.619 0.00 0.00 0.00 3.16
2296 2976 3.006940 GCAACCAGTGACGATTCCATTA 58.993 45.455 0.00 0.00 0.00 1.90
2297 2977 3.063997 GCAACCAGTGACGATTCCATTAG 59.936 47.826 0.00 0.00 0.00 1.73
2298 2978 3.543680 ACCAGTGACGATTCCATTAGG 57.456 47.619 0.00 0.00 0.00 2.69
2299 2979 2.170607 ACCAGTGACGATTCCATTAGGG 59.829 50.000 0.00 0.00 34.83 3.53
2300 2980 2.434336 CCAGTGACGATTCCATTAGGGA 59.566 50.000 0.00 0.00 46.61 4.20
2311 2991 4.982241 TCCATTAGGGAGGCTTCAATAG 57.018 45.455 0.00 0.00 42.15 1.73
2312 2992 3.652869 TCCATTAGGGAGGCTTCAATAGG 59.347 47.826 0.00 0.00 42.15 2.57
2313 2993 6.039188 TCCATTAGGGAGGCTTCAATAGGC 62.039 50.000 0.00 0.00 42.15 3.93
2331 3011 2.801077 GCTTAAGCCTACCCTCCAAA 57.199 50.000 17.00 0.00 34.31 3.28
2332 3012 3.081710 GCTTAAGCCTACCCTCCAAAA 57.918 47.619 17.00 0.00 34.31 2.44
2333 3013 3.632333 GCTTAAGCCTACCCTCCAAAAT 58.368 45.455 17.00 0.00 34.31 1.82
2338 3018 5.669798 AAGCCTACCCTCCAAAATCATAT 57.330 39.130 0.00 0.00 0.00 1.78
2343 3023 7.725844 AGCCTACCCTCCAAAATCATATTTAAG 59.274 37.037 0.00 0.00 0.00 1.85
2348 3028 9.487442 ACCCTCCAAAATCATATTTAAGCTAAA 57.513 29.630 0.00 0.00 0.00 1.85
2349 3029 9.750125 CCCTCCAAAATCATATTTAAGCTAAAC 57.250 33.333 0.00 0.00 0.00 2.01
2377 3057 7.538575 ACAACTTGACAAATATATTCTGGTGC 58.461 34.615 0.00 0.00 0.00 5.01
2378 3058 7.394359 ACAACTTGACAAATATATTCTGGTGCT 59.606 33.333 0.00 0.00 0.00 4.40
2379 3059 7.944729 ACTTGACAAATATATTCTGGTGCTT 57.055 32.000 0.00 0.00 0.00 3.91
2380 3060 8.353423 ACTTGACAAATATATTCTGGTGCTTT 57.647 30.769 0.00 0.00 0.00 3.51
2381 3061 9.461312 ACTTGACAAATATATTCTGGTGCTTTA 57.539 29.630 0.00 0.00 0.00 1.85
2382 3062 9.722056 CTTGACAAATATATTCTGGTGCTTTAC 57.278 33.333 0.00 0.00 0.00 2.01
2383 3063 8.800370 TGACAAATATATTCTGGTGCTTTACA 57.200 30.769 0.00 0.00 0.00 2.41
2384 3064 9.407380 TGACAAATATATTCTGGTGCTTTACAT 57.593 29.630 0.00 0.00 0.00 2.29
2385 3065 9.669353 GACAAATATATTCTGGTGCTTTACATG 57.331 33.333 0.00 0.00 0.00 3.21
2386 3066 8.137437 ACAAATATATTCTGGTGCTTTACATGC 58.863 33.333 0.00 0.00 0.00 4.06
2387 3067 7.822161 AATATATTCTGGTGCTTTACATGCA 57.178 32.000 0.00 0.00 38.19 3.96
2388 3068 7.822161 ATATATTCTGGTGCTTTACATGCAA 57.178 32.000 0.00 0.00 42.41 4.08
2394 3074 4.650545 GGTGCTTTACATGCAACAATTG 57.349 40.909 3.24 3.24 46.39 2.32
2406 3086 2.911120 CAACAATTGCACTGCATTTGC 58.089 42.857 27.19 12.45 46.86 3.68
2407 3087 2.536761 ACAATTGCACTGCATTTGCT 57.463 40.000 27.19 16.98 46.86 3.91
2408 3088 3.663995 ACAATTGCACTGCATTTGCTA 57.336 38.095 27.19 12.88 46.86 3.49
2409 3089 3.992643 ACAATTGCACTGCATTTGCTAA 58.007 36.364 27.19 12.37 46.86 3.09
2410 3090 4.571919 ACAATTGCACTGCATTTGCTAAT 58.428 34.783 27.19 13.08 46.86 1.73
2411 3091 4.998672 ACAATTGCACTGCATTTGCTAATT 59.001 33.333 27.19 17.24 46.86 1.40
2412 3092 6.164876 ACAATTGCACTGCATTTGCTAATTA 58.835 32.000 27.19 3.47 46.86 1.40
2413 3093 6.311935 ACAATTGCACTGCATTTGCTAATTAG 59.688 34.615 27.19 8.20 46.86 1.73
2414 3094 5.641783 TTGCACTGCATTTGCTAATTAGA 57.358 34.783 16.85 0.00 40.86 2.10
2415 3095 4.985413 TGCACTGCATTTGCTAATTAGAC 58.015 39.130 16.85 8.12 40.86 2.59
2416 3096 4.701651 TGCACTGCATTTGCTAATTAGACT 59.298 37.500 16.85 0.00 40.86 3.24
2417 3097 5.183713 TGCACTGCATTTGCTAATTAGACTT 59.816 36.000 16.85 0.00 40.86 3.01
2418 3098 6.374053 TGCACTGCATTTGCTAATTAGACTTA 59.626 34.615 16.85 0.00 40.86 2.24
2419 3099 6.909357 GCACTGCATTTGCTAATTAGACTTAG 59.091 38.462 16.85 6.77 42.66 2.18
2420 3100 7.412853 CACTGCATTTGCTAATTAGACTTAGG 58.587 38.462 16.85 1.98 42.66 2.69
2421 3101 7.280876 CACTGCATTTGCTAATTAGACTTAGGA 59.719 37.037 16.85 3.19 42.66 2.94
2422 3102 7.829211 ACTGCATTTGCTAATTAGACTTAGGAA 59.171 33.333 16.85 0.00 42.66 3.36
2423 3103 8.574251 TGCATTTGCTAATTAGACTTAGGAAA 57.426 30.769 16.85 11.26 46.28 3.13
2443 3123 8.074613 AGGAAATTTATGTTTTAAGCCTACCC 57.925 34.615 0.00 0.00 0.00 3.69
2444 3124 7.899172 AGGAAATTTATGTTTTAAGCCTACCCT 59.101 33.333 0.00 0.00 0.00 4.34
2445 3125 8.195436 GGAAATTTATGTTTTAAGCCTACCCTC 58.805 37.037 0.00 0.00 0.00 4.30
2446 3126 7.655521 AATTTATGTTTTAAGCCTACCCTCC 57.344 36.000 0.00 0.00 0.00 4.30
2447 3127 5.782677 TTATGTTTTAAGCCTACCCTCCA 57.217 39.130 0.00 0.00 0.00 3.86
2448 3128 4.668138 ATGTTTTAAGCCTACCCTCCAA 57.332 40.909 0.00 0.00 0.00 3.53
2449 3129 4.668138 TGTTTTAAGCCTACCCTCCAAT 57.332 40.909 0.00 0.00 0.00 3.16
2450 3130 4.340617 TGTTTTAAGCCTACCCTCCAATG 58.659 43.478 0.00 0.00 0.00 2.82
2451 3131 4.202631 TGTTTTAAGCCTACCCTCCAATGT 60.203 41.667 0.00 0.00 0.00 2.71
2452 3132 3.926058 TTAAGCCTACCCTCCAATGTC 57.074 47.619 0.00 0.00 0.00 3.06
2453 3133 0.919710 AAGCCTACCCTCCAATGTCC 59.080 55.000 0.00 0.00 0.00 4.02
2454 3134 0.044855 AGCCTACCCTCCAATGTCCT 59.955 55.000 0.00 0.00 0.00 3.85
2455 3135 0.181350 GCCTACCCTCCAATGTCCTG 59.819 60.000 0.00 0.00 0.00 3.86
2456 3136 0.181350 CCTACCCTCCAATGTCCTGC 59.819 60.000 0.00 0.00 0.00 4.85
2457 3137 1.207791 CTACCCTCCAATGTCCTGCT 58.792 55.000 0.00 0.00 0.00 4.24
2458 3138 2.398588 CTACCCTCCAATGTCCTGCTA 58.601 52.381 0.00 0.00 0.00 3.49
2459 3139 1.207791 ACCCTCCAATGTCCTGCTAG 58.792 55.000 0.00 0.00 0.00 3.42
2460 3140 1.273838 ACCCTCCAATGTCCTGCTAGA 60.274 52.381 0.00 0.00 0.00 2.43
2461 3141 2.053244 CCCTCCAATGTCCTGCTAGAT 58.947 52.381 0.00 0.00 0.00 1.98
2462 3142 2.441001 CCCTCCAATGTCCTGCTAGATT 59.559 50.000 0.00 0.00 0.00 2.40
2463 3143 3.474600 CCTCCAATGTCCTGCTAGATTG 58.525 50.000 0.00 0.00 31.65 2.67
2464 3144 3.474600 CTCCAATGTCCTGCTAGATTGG 58.525 50.000 10.86 10.86 46.58 3.16
2465 3145 1.952296 CCAATGTCCTGCTAGATTGGC 59.048 52.381 5.86 0.00 41.66 4.52
2466 3146 1.952296 CAATGTCCTGCTAGATTGGCC 59.048 52.381 0.00 0.00 0.00 5.36
2467 3147 1.216064 ATGTCCTGCTAGATTGGCCA 58.784 50.000 0.00 0.00 0.00 5.36
2468 3148 0.253044 TGTCCTGCTAGATTGGCCAC 59.747 55.000 3.88 0.00 0.00 5.01
2469 3149 0.543749 GTCCTGCTAGATTGGCCACT 59.456 55.000 3.88 0.00 0.00 4.00
2470 3150 0.543277 TCCTGCTAGATTGGCCACTG 59.457 55.000 3.88 0.00 0.00 3.66
2537 3218 1.673400 CGAGTCGTCCTCATCATCACT 59.327 52.381 3.82 0.00 40.48 3.41
2543 3227 2.286713 CGTCCTCATCATCACTCTCGTC 60.287 54.545 0.00 0.00 0.00 4.20
2589 3273 1.720805 CGTCATCCCAACGTTCATCA 58.279 50.000 0.00 0.00 35.47 3.07
2657 3341 1.344438 CGATATAGCCAGTGCCTTCCA 59.656 52.381 0.00 0.00 38.69 3.53
2663 3347 2.425592 CAGTGCCTTCCACCGACA 59.574 61.111 0.00 0.00 45.83 4.35
2944 3698 3.998672 GGGGTCTCGAACGTGCCA 61.999 66.667 0.00 0.00 0.00 4.92
2987 3741 1.306148 CCGGATCTCAGCGTAGTACA 58.694 55.000 0.00 0.00 0.00 2.90
3070 3832 3.545481 GTGGCGCGTCGATGACAG 61.545 66.667 9.31 0.00 32.09 3.51
3076 3838 4.498520 CGTCGATGACAGGGCGCT 62.499 66.667 7.64 0.00 32.09 5.92
3177 3955 1.081442 GCAATTTATAGGCGCGCCC 60.081 57.895 44.47 27.39 36.58 6.13
3321 4133 1.220206 CGGCTGTTGGAGATGCTCT 59.780 57.895 0.00 0.00 0.00 4.09
3322 4134 0.461548 CGGCTGTTGGAGATGCTCTA 59.538 55.000 0.00 0.00 0.00 2.43
3323 4135 1.134699 CGGCTGTTGGAGATGCTCTAA 60.135 52.381 0.00 0.00 0.00 2.10
3329 4141 4.871993 GTTGGAGATGCTCTAACACATG 57.128 45.455 15.79 0.00 46.43 3.21
3330 4142 4.256920 GTTGGAGATGCTCTAACACATGT 58.743 43.478 15.79 0.00 46.43 3.21
3331 4143 5.419542 GTTGGAGATGCTCTAACACATGTA 58.580 41.667 15.79 0.00 46.43 2.29
3332 4144 5.876651 TGGAGATGCTCTAACACATGTAT 57.123 39.130 0.00 0.00 0.00 2.29
3333 4145 5.847304 TGGAGATGCTCTAACACATGTATC 58.153 41.667 0.00 0.00 0.00 2.24
3334 4146 5.363580 TGGAGATGCTCTAACACATGTATCA 59.636 40.000 0.00 0.00 0.00 2.15
3335 4147 5.694006 GGAGATGCTCTAACACATGTATCAC 59.306 44.000 0.00 0.00 0.00 3.06
3336 4148 5.284864 AGATGCTCTAACACATGTATCACG 58.715 41.667 0.00 0.00 0.00 4.35
3337 4149 4.450082 TGCTCTAACACATGTATCACGT 57.550 40.909 0.00 0.00 0.00 4.49
3338 4150 4.173256 TGCTCTAACACATGTATCACGTG 58.827 43.478 9.94 9.94 40.80 4.49
3339 4151 3.551890 GCTCTAACACATGTATCACGTGG 59.448 47.826 17.00 0.08 39.36 4.94
3340 4152 4.744570 CTCTAACACATGTATCACGTGGT 58.255 43.478 17.00 12.05 39.36 4.16
3341 4153 5.677852 GCTCTAACACATGTATCACGTGGTA 60.678 44.000 17.00 10.73 39.36 3.25
3343 4155 2.888594 ACACATGTATCACGTGGTAGC 58.111 47.619 17.00 8.44 39.36 3.58
3344 4156 2.496070 ACACATGTATCACGTGGTAGCT 59.504 45.455 17.00 0.00 39.36 3.32
3345 4157 3.697542 ACACATGTATCACGTGGTAGCTA 59.302 43.478 17.00 2.72 39.36 3.32
3346 4158 4.042398 CACATGTATCACGTGGTAGCTAC 58.958 47.826 17.00 15.88 39.36 3.58
3347 4159 3.697542 ACATGTATCACGTGGTAGCTACA 59.302 43.478 24.75 10.29 39.36 2.74
3348 4160 3.770263 TGTATCACGTGGTAGCTACAC 57.230 47.619 24.75 18.21 35.55 2.90
3349 4161 3.349927 TGTATCACGTGGTAGCTACACT 58.650 45.455 24.75 8.23 36.71 3.55
3350 4162 3.376234 TGTATCACGTGGTAGCTACACTC 59.624 47.826 24.75 13.48 36.71 3.51
3351 4163 2.195741 TCACGTGGTAGCTACACTCT 57.804 50.000 24.75 2.09 36.71 3.24
3352 4164 2.511659 TCACGTGGTAGCTACACTCTT 58.488 47.619 24.75 6.86 36.71 2.85
3353 4165 2.889045 TCACGTGGTAGCTACACTCTTT 59.111 45.455 24.75 1.49 36.71 2.52
3354 4166 4.074259 TCACGTGGTAGCTACACTCTTTA 58.926 43.478 24.75 2.38 36.71 1.85
3355 4167 4.703575 TCACGTGGTAGCTACACTCTTTAT 59.296 41.667 24.75 0.00 36.71 1.40
3356 4168 5.184479 TCACGTGGTAGCTACACTCTTTATT 59.816 40.000 24.75 0.00 36.71 1.40
3357 4169 5.867716 CACGTGGTAGCTACACTCTTTATTT 59.132 40.000 24.75 0.00 36.71 1.40
3358 4170 6.367969 CACGTGGTAGCTACACTCTTTATTTT 59.632 38.462 24.75 0.00 36.71 1.82
3359 4171 7.543172 CACGTGGTAGCTACACTCTTTATTTTA 59.457 37.037 24.75 0.00 36.71 1.52
3360 4172 8.255905 ACGTGGTAGCTACACTCTTTATTTTAT 58.744 33.333 24.75 0.00 36.71 1.40
3361 4173 9.095065 CGTGGTAGCTACACTCTTTATTTTATT 57.905 33.333 24.75 0.00 36.71 1.40
3409 4221 9.592720 GGAAATTTTATTTTTGAACAATCACGG 57.407 29.630 0.00 0.00 34.61 4.94
3410 4222 9.592720 GAAATTTTATTTTTGAACAATCACGGG 57.407 29.630 0.00 0.00 34.61 5.28
3411 4223 7.665561 ATTTTATTTTTGAACAATCACGGGG 57.334 32.000 0.00 0.00 34.61 5.73
3412 4224 6.406692 TTTATTTTTGAACAATCACGGGGA 57.593 33.333 0.00 0.00 34.61 4.81
3413 4225 6.597832 TTATTTTTGAACAATCACGGGGAT 57.402 33.333 0.00 0.00 38.05 3.85
3415 4227 4.513198 TTTTGAACAATCACGGGGATTC 57.487 40.909 1.65 0.00 44.41 2.52
3416 4228 2.122783 TGAACAATCACGGGGATTCC 57.877 50.000 1.65 0.00 44.41 3.01
3417 4229 1.352687 TGAACAATCACGGGGATTCCA 59.647 47.619 1.65 0.00 44.41 3.53
3418 4230 2.224892 TGAACAATCACGGGGATTCCAA 60.225 45.455 1.65 0.00 44.41 3.53
3419 4231 1.834188 ACAATCACGGGGATTCCAAC 58.166 50.000 1.65 0.00 44.41 3.77
3420 4232 1.354368 ACAATCACGGGGATTCCAACT 59.646 47.619 1.65 0.00 44.41 3.16
3421 4233 1.745087 CAATCACGGGGATTCCAACTG 59.255 52.381 1.65 0.00 44.41 3.16
3422 4234 0.255890 ATCACGGGGATTCCAACTGG 59.744 55.000 4.80 0.00 29.81 4.00
3423 4235 0.838554 TCACGGGGATTCCAACTGGA 60.839 55.000 4.80 0.00 43.73 3.86
3424 4236 0.255890 CACGGGGATTCCAACTGGAT 59.744 55.000 4.80 0.00 44.98 3.41
3425 4237 0.255890 ACGGGGATTCCAACTGGATG 59.744 55.000 4.80 0.00 44.98 3.51
3426 4238 1.103398 CGGGGATTCCAACTGGATGC 61.103 60.000 4.80 0.00 44.98 3.91
3427 4239 0.033208 GGGGATTCCAACTGGATGCA 60.033 55.000 4.80 0.00 44.98 3.96
3428 4240 1.412074 GGGGATTCCAACTGGATGCAT 60.412 52.381 0.00 0.00 44.98 3.96
3429 4241 2.391678 GGGATTCCAACTGGATGCATT 58.608 47.619 0.00 0.00 44.98 3.56
3430 4242 3.565307 GGGATTCCAACTGGATGCATTA 58.435 45.455 0.00 0.00 44.98 1.90
3431 4243 3.319122 GGGATTCCAACTGGATGCATTAC 59.681 47.826 0.00 0.00 44.98 1.89
3432 4244 4.210331 GGATTCCAACTGGATGCATTACT 58.790 43.478 0.00 0.00 44.98 2.24
3433 4245 4.276926 GGATTCCAACTGGATGCATTACTC 59.723 45.833 0.00 0.00 44.98 2.59
3434 4246 3.998913 TCCAACTGGATGCATTACTCA 57.001 42.857 0.00 0.00 39.78 3.41
3435 4247 4.299586 TCCAACTGGATGCATTACTCAA 57.700 40.909 0.00 0.00 39.78 3.02
3436 4248 4.264253 TCCAACTGGATGCATTACTCAAG 58.736 43.478 0.00 0.00 39.78 3.02
3437 4249 4.019411 TCCAACTGGATGCATTACTCAAGA 60.019 41.667 0.00 0.00 39.78 3.02
3438 4250 4.334759 CCAACTGGATGCATTACTCAAGAG 59.665 45.833 0.00 0.00 37.39 2.85
3439 4251 4.833478 ACTGGATGCATTACTCAAGAGT 57.167 40.909 0.00 7.96 45.02 3.24
3440 4252 4.764172 ACTGGATGCATTACTCAAGAGTC 58.236 43.478 5.91 0.00 42.54 3.36
3441 4253 4.125703 CTGGATGCATTACTCAAGAGTCC 58.874 47.826 5.91 0.78 42.54 3.85
3442 4254 3.519107 TGGATGCATTACTCAAGAGTCCA 59.481 43.478 5.91 3.44 42.54 4.02
3443 4255 4.019411 TGGATGCATTACTCAAGAGTCCAA 60.019 41.667 5.91 0.00 42.54 3.53
3444 4256 4.574013 GGATGCATTACTCAAGAGTCCAAG 59.426 45.833 5.91 0.00 42.54 3.61
3445 4257 4.623932 TGCATTACTCAAGAGTCCAAGT 57.376 40.909 5.91 0.00 42.54 3.16
3446 4258 4.973168 TGCATTACTCAAGAGTCCAAGTT 58.027 39.130 5.91 0.00 42.54 2.66
3447 4259 6.109156 TGCATTACTCAAGAGTCCAAGTTA 57.891 37.500 5.91 0.00 42.54 2.24
3448 4260 6.530120 TGCATTACTCAAGAGTCCAAGTTAA 58.470 36.000 5.91 0.00 42.54 2.01
3449 4261 6.650807 TGCATTACTCAAGAGTCCAAGTTAAG 59.349 38.462 5.91 0.00 42.54 1.85
3450 4262 6.092807 GCATTACTCAAGAGTCCAAGTTAAGG 59.907 42.308 5.91 0.00 42.54 2.69
3451 4263 6.742559 TTACTCAAGAGTCCAAGTTAAGGT 57.257 37.500 5.91 0.00 42.54 3.50
3452 4264 5.632034 ACTCAAGAGTCCAAGTTAAGGTT 57.368 39.130 0.00 0.00 36.92 3.50
3453 4265 5.368989 ACTCAAGAGTCCAAGTTAAGGTTG 58.631 41.667 0.00 0.00 36.92 3.77
3454 4266 5.104485 ACTCAAGAGTCCAAGTTAAGGTTGT 60.104 40.000 0.00 0.00 36.92 3.32
3455 4267 6.099269 ACTCAAGAGTCCAAGTTAAGGTTGTA 59.901 38.462 0.00 0.00 36.92 2.41
3456 4268 6.522054 TCAAGAGTCCAAGTTAAGGTTGTAG 58.478 40.000 0.00 0.00 0.00 2.74
3457 4269 6.099269 TCAAGAGTCCAAGTTAAGGTTGTAGT 59.901 38.462 0.00 0.00 0.00 2.73
3458 4270 6.099159 AGAGTCCAAGTTAAGGTTGTAGTC 57.901 41.667 0.00 0.00 0.00 2.59
3459 4271 5.011840 AGAGTCCAAGTTAAGGTTGTAGTCC 59.988 44.000 0.00 0.00 0.00 3.85
3460 4272 4.906060 AGTCCAAGTTAAGGTTGTAGTCCT 59.094 41.667 0.00 0.00 36.81 3.85
3461 4273 6.080009 AGTCCAAGTTAAGGTTGTAGTCCTA 58.920 40.000 0.00 0.00 34.56 2.94
3462 4274 6.556116 AGTCCAAGTTAAGGTTGTAGTCCTAA 59.444 38.462 0.00 0.00 34.56 2.69
3463 4275 6.648310 GTCCAAGTTAAGGTTGTAGTCCTAAC 59.352 42.308 0.00 0.00 34.56 2.34
3464 4276 6.556116 TCCAAGTTAAGGTTGTAGTCCTAACT 59.444 38.462 0.00 0.00 39.66 2.24
3465 4277 7.071572 TCCAAGTTAAGGTTGTAGTCCTAACTT 59.928 37.037 0.00 0.00 38.20 2.66
3466 4278 8.370182 CCAAGTTAAGGTTGTAGTCCTAACTTA 58.630 37.037 5.08 0.00 37.12 2.24
3467 4279 9.768662 CAAGTTAAGGTTGTAGTCCTAACTTAA 57.231 33.333 5.08 0.00 37.12 1.85
3468 4280 9.993454 AAGTTAAGGTTGTAGTCCTAACTTAAG 57.007 33.333 0.00 0.00 37.26 1.85
3469 4281 9.372189 AGTTAAGGTTGTAGTCCTAACTTAAGA 57.628 33.333 10.09 0.00 36.92 2.10
3470 4282 9.987272 GTTAAGGTTGTAGTCCTAACTTAAGAA 57.013 33.333 10.09 0.00 36.92 2.52
3473 4285 8.667592 AGGTTGTAGTCCTAACTTAAGAATCT 57.332 34.615 10.09 1.77 36.92 2.40
3474 4286 9.102453 AGGTTGTAGTCCTAACTTAAGAATCTT 57.898 33.333 10.09 0.00 36.92 2.40
3475 4287 9.722184 GGTTGTAGTCCTAACTTAAGAATCTTT 57.278 33.333 10.09 0.00 36.92 2.52
3486 4298 8.999220 AACTTAAGAATCTTTTAGTACCCTCG 57.001 34.615 10.09 0.00 0.00 4.63
3487 4299 8.358582 ACTTAAGAATCTTTTAGTACCCTCGA 57.641 34.615 10.09 0.00 0.00 4.04
3488 4300 8.810041 ACTTAAGAATCTTTTAGTACCCTCGAA 58.190 33.333 10.09 0.00 0.00 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.020731 ACTACAAAAATTCATTTACCTACCCTG 57.979 33.333 0.00 0.00 0.00 4.45
2 3 9.020731 CACTACAAAAATTCATTTACCTACCCT 57.979 33.333 0.00 0.00 0.00 4.34
17 18 9.040939 GTCTTTTGCAATAACCACTACAAAAAT 57.959 29.630 0.00 0.00 36.78 1.82
23 24 5.912955 GTGTGTCTTTTGCAATAACCACTAC 59.087 40.000 0.00 3.97 0.00 2.73
25 26 4.400884 TGTGTGTCTTTTGCAATAACCACT 59.599 37.500 0.00 0.00 0.00 4.00
26 27 4.677584 TGTGTGTCTTTTGCAATAACCAC 58.322 39.130 0.00 6.43 0.00 4.16
27 28 4.991153 TGTGTGTCTTTTGCAATAACCA 57.009 36.364 0.00 0.00 0.00 3.67
28 29 4.685628 CCATGTGTGTCTTTTGCAATAACC 59.314 41.667 0.00 0.00 0.00 2.85
146 149 8.296713 TCCTAGGTTGATTTTGAATTTCTTTCG 58.703 33.333 9.08 0.00 37.13 3.46
272 278 6.658188 AACCTTACCATATGAGCTAGTCTC 57.342 41.667 3.65 7.10 42.23 3.36
274 280 7.553044 ACAAAAACCTTACCATATGAGCTAGTC 59.447 37.037 3.65 0.00 0.00 2.59
275 281 7.336931 CACAAAAACCTTACCATATGAGCTAGT 59.663 37.037 3.65 0.00 0.00 2.57
276 282 7.201732 CCACAAAAACCTTACCATATGAGCTAG 60.202 40.741 3.65 0.00 0.00 3.42
280 286 6.350110 CCACCACAAAAACCTTACCATATGAG 60.350 42.308 3.65 0.00 0.00 2.90
282 288 5.478679 TCCACCACAAAAACCTTACCATATG 59.521 40.000 0.00 0.00 0.00 1.78
283 289 5.646215 TCCACCACAAAAACCTTACCATAT 58.354 37.500 0.00 0.00 0.00 1.78
284 290 5.063017 TCCACCACAAAAACCTTACCATA 57.937 39.130 0.00 0.00 0.00 2.74
285 291 3.917300 TCCACCACAAAAACCTTACCAT 58.083 40.909 0.00 0.00 0.00 3.55
286 292 3.383698 TCCACCACAAAAACCTTACCA 57.616 42.857 0.00 0.00 0.00 3.25
288 294 3.447944 TGGTTCCACCACAAAAACCTTAC 59.552 43.478 4.90 0.00 44.79 2.34
291 297 2.107366 CTGGTTCCACCACAAAAACCT 58.893 47.619 4.90 0.00 44.79 3.50
293 299 1.205893 TGCTGGTTCCACCACAAAAAC 59.794 47.619 0.00 0.00 44.79 2.43
295 301 0.820871 GTGCTGGTTCCACCACAAAA 59.179 50.000 11.13 0.00 44.79 2.44
301 307 1.339151 CCTTAGAGTGCTGGTTCCACC 60.339 57.143 0.00 0.00 39.22 4.61
309 315 3.667497 TGTCTCAACCTTAGAGTGCTG 57.333 47.619 0.00 0.00 34.73 4.41
310 316 4.323104 GGAATGTCTCAACCTTAGAGTGCT 60.323 45.833 0.00 0.00 34.73 4.40
313 319 4.168101 TGGGAATGTCTCAACCTTAGAGT 58.832 43.478 0.00 0.00 34.73 3.24
315 321 4.141937 CGATGGGAATGTCTCAACCTTAGA 60.142 45.833 0.00 0.00 26.19 2.10
319 325 2.093447 GTCGATGGGAATGTCTCAACCT 60.093 50.000 0.00 0.00 26.19 3.50
324 330 2.287668 CCGTAGTCGATGGGAATGTCTC 60.288 54.545 0.00 0.00 39.71 3.36
326 332 1.679680 TCCGTAGTCGATGGGAATGTC 59.320 52.381 0.00 0.00 39.71 3.06
327 333 1.681793 CTCCGTAGTCGATGGGAATGT 59.318 52.381 0.00 0.00 39.71 2.71
328 334 1.000163 CCTCCGTAGTCGATGGGAATG 60.000 57.143 0.00 0.00 39.71 2.67
329 335 1.329256 CCTCCGTAGTCGATGGGAAT 58.671 55.000 0.00 0.00 39.71 3.01
335 420 3.593794 GGCGCCTCCGTAGTCGAT 61.594 66.667 22.15 0.00 39.71 3.59
337 422 3.352338 AAAGGCGCCTCCGTAGTCG 62.352 63.158 32.93 0.00 40.77 4.18
362 447 6.042777 GGTACATCATCTTGAGATTGACGAA 58.957 40.000 0.00 0.00 31.21 3.85
366 451 4.740634 GCCGGTACATCATCTTGAGATTGA 60.741 45.833 1.90 0.00 31.21 2.57
371 456 2.898729 AGCCGGTACATCATCTTGAG 57.101 50.000 1.90 0.00 0.00 3.02
373 458 4.051922 GACTAAGCCGGTACATCATCTTG 58.948 47.826 1.90 0.00 0.00 3.02
384 469 0.531200 CTCCGAAAGACTAAGCCGGT 59.469 55.000 1.90 0.00 40.87 5.28
385 470 0.179108 CCTCCGAAAGACTAAGCCGG 60.179 60.000 0.00 0.00 41.36 6.13
386 471 0.531200 ACCTCCGAAAGACTAAGCCG 59.469 55.000 0.00 0.00 0.00 5.52
388 473 3.119101 TGATCACCTCCGAAAGACTAAGC 60.119 47.826 0.00 0.00 0.00 3.09
391 476 4.827835 CCTATGATCACCTCCGAAAGACTA 59.172 45.833 0.00 0.00 0.00 2.59
392 477 3.639094 CCTATGATCACCTCCGAAAGACT 59.361 47.826 0.00 0.00 0.00 3.24
400 485 2.541466 CCTACCCCTATGATCACCTCC 58.459 57.143 0.00 0.00 0.00 4.30
401 486 2.158143 ACCCTACCCCTATGATCACCTC 60.158 54.545 0.00 0.00 0.00 3.85
405 490 2.689658 CACACCCTACCCCTATGATCA 58.310 52.381 0.00 0.00 0.00 2.92
409 494 1.140312 ATGCACACCCTACCCCTATG 58.860 55.000 0.00 0.00 0.00 2.23
411 496 1.632018 GCATGCACACCCTACCCCTA 61.632 60.000 14.21 0.00 0.00 3.53
413 498 2.440247 GCATGCACACCCTACCCC 60.440 66.667 14.21 0.00 0.00 4.95
415 500 2.183409 CAAGCATGCACACCCTACC 58.817 57.895 21.98 0.00 0.00 3.18
426 511 5.066117 ACTCACTCTTATGAATGCAAGCATG 59.934 40.000 8.50 0.00 36.68 4.06
427 512 5.191426 ACTCACTCTTATGAATGCAAGCAT 58.809 37.500 0.86 0.86 38.46 3.79
430 515 8.886719 TCATAAACTCACTCTTATGAATGCAAG 58.113 33.333 0.00 0.00 40.08 4.01
431 516 8.791327 TCATAAACTCACTCTTATGAATGCAA 57.209 30.769 0.00 0.00 40.08 4.08
438 523 7.463383 GCAGACGTTCATAAACTCACTCTTATG 60.463 40.741 0.00 0.00 37.01 1.90
444 529 3.990092 TGCAGACGTTCATAAACTCACT 58.010 40.909 0.00 0.00 32.95 3.41
446 531 3.932710 GGATGCAGACGTTCATAAACTCA 59.067 43.478 0.00 0.00 32.95 3.41
451 536 2.665649 ACGGATGCAGACGTTCATAA 57.334 45.000 12.07 0.00 40.99 1.90
452 537 2.543031 GCTACGGATGCAGACGTTCATA 60.543 50.000 21.08 5.15 43.79 2.15
454 539 0.457853 GCTACGGATGCAGACGTTCA 60.458 55.000 21.08 6.11 43.79 3.18
457 542 2.102357 CGCTACGGATGCAGACGT 59.898 61.111 20.02 20.02 46.17 4.34
465 550 4.751098 TGTTTTTCTTTACACGCTACGGAT 59.249 37.500 0.00 0.00 0.00 4.18
468 553 6.629649 TCAAATGTTTTTCTTTACACGCTACG 59.370 34.615 0.00 0.00 0.00 3.51
470 555 8.912787 TTTCAAATGTTTTTCTTTACACGCTA 57.087 26.923 0.00 0.00 0.00 4.26
472 557 8.867248 TTTTTCAAATGTTTTTCTTTACACGC 57.133 26.923 0.00 0.00 0.00 5.34
506 594 5.921004 TGCATTTTGCTTGGTTTTGATAC 57.079 34.783 0.75 0.00 45.31 2.24
513 601 2.415776 CCGAATGCATTTTGCTTGGTT 58.584 42.857 14.33 0.00 45.31 3.67
514 602 1.338011 CCCGAATGCATTTTGCTTGGT 60.338 47.619 14.33 0.00 45.31 3.67
515 603 1.338011 ACCCGAATGCATTTTGCTTGG 60.338 47.619 14.33 10.17 45.31 3.61
528 616 6.597832 TGTCATAAATTTTGGAACCCGAAT 57.402 33.333 0.00 0.00 0.00 3.34
529 617 6.209589 TGATGTCATAAATTTTGGAACCCGAA 59.790 34.615 0.00 0.00 0.00 4.30
531 619 5.960113 TGATGTCATAAATTTTGGAACCCG 58.040 37.500 0.00 0.00 0.00 5.28
534 622 9.603921 ATGGAATGATGTCATAAATTTTGGAAC 57.396 29.630 0.00 0.00 35.10 3.62
597 716 5.548406 ACGAATCCAGTTTTTACTAGCAGT 58.452 37.500 0.00 0.00 0.00 4.40
600 719 5.086727 GCAACGAATCCAGTTTTTACTAGC 58.913 41.667 0.00 0.00 0.00 3.42
605 724 6.827586 AATAGGCAACGAATCCAGTTTTTA 57.172 33.333 0.00 0.00 46.39 1.52
627 747 5.625251 CGCAGAAACTAAGTACTCGTCTAA 58.375 41.667 0.00 0.00 0.00 2.10
628 748 4.436584 GCGCAGAAACTAAGTACTCGTCTA 60.437 45.833 0.30 0.00 0.00 2.59
629 749 3.670091 GCGCAGAAACTAAGTACTCGTCT 60.670 47.826 0.30 0.00 0.00 4.18
632 752 1.918609 GGCGCAGAAACTAAGTACTCG 59.081 52.381 10.83 0.00 0.00 4.18
633 753 2.269172 GGGCGCAGAAACTAAGTACTC 58.731 52.381 10.83 0.00 0.00 2.59
635 755 2.088950 TGGGCGCAGAAACTAAGTAC 57.911 50.000 10.83 0.00 0.00 2.73
675 798 7.033791 ACTTACTACTCCACGTTGATTATGTG 58.966 38.462 0.00 0.00 42.36 3.21
715 1070 2.591715 GCCTCCCGCACGCATATT 60.592 61.111 0.00 0.00 37.47 1.28
738 1093 3.764885 AATTAGTTCCATTGACAGCGC 57.235 42.857 0.00 0.00 0.00 5.92
759 1114 0.748367 TCACGGTGCTCTCTATCGCT 60.748 55.000 2.51 0.00 0.00 4.93
765 1120 2.282251 TCGGTCACGGTGCTCTCT 60.282 61.111 2.51 0.00 41.39 3.10
773 1128 2.507110 ATCCAGCTTGTCGGTCACGG 62.507 60.000 0.00 0.00 41.39 4.94
782 1137 2.693069 CTTCTCGTTGATCCAGCTTGT 58.307 47.619 0.00 0.00 0.00 3.16
804 1166 5.241728 GGTAGACAAGCTTTCCTGAATGTTT 59.758 40.000 0.00 0.00 0.00 2.83
824 1186 9.104965 TGGAAATTGATTAATTACTGTCGGTAG 57.895 33.333 0.00 0.00 35.50 3.18
825 1187 9.451002 TTGGAAATTGATTAATTACTGTCGGTA 57.549 29.630 0.00 0.00 35.50 4.02
826 1188 7.931578 TGGAAATTGATTAATTACTGTCGGT 57.068 32.000 0.00 0.00 35.50 4.69
936 1339 0.807496 GGAAAGAGTGAGGCATGCAC 59.193 55.000 21.36 13.34 36.53 4.57
972 1375 1.878656 ATATAGAGAGCACGCCGGCC 61.879 60.000 23.46 7.02 0.00 6.13
973 1376 0.456995 GATATAGAGAGCACGCCGGC 60.457 60.000 19.07 19.07 0.00 6.13
985 1388 9.372369 CGACATATATATGGAGCGAGATATAGA 57.628 37.037 23.44 0.00 38.00 1.98
986 1389 9.157104 ACGACATATATATGGAGCGAGATATAG 57.843 37.037 26.93 9.83 38.00 1.31
992 1395 4.500837 GCAACGACATATATATGGAGCGAG 59.499 45.833 26.93 21.47 38.00 5.03
993 1396 4.082463 TGCAACGACATATATATGGAGCGA 60.082 41.667 26.93 12.30 38.00 4.93
994 1397 4.031765 GTGCAACGACATATATATGGAGCG 59.968 45.833 23.44 22.79 38.00 5.03
995 1398 4.330074 GGTGCAACGACATATATATGGAGC 59.670 45.833 23.44 18.41 38.12 4.70
997 1400 4.218852 TCGGTGCAACGACATATATATGGA 59.781 41.667 25.58 0.00 38.06 3.41
998 1401 4.490743 TCGGTGCAACGACATATATATGG 58.509 43.478 25.58 11.38 38.06 2.74
1029 1523 2.022934 AGACCTAGCTACGTACCTTGC 58.977 52.381 0.00 0.00 0.00 4.01
1040 1534 6.487331 GCCGTATATATGTATGAGACCTAGCT 59.513 42.308 0.52 0.00 0.00 3.32
1064 1558 0.449388 CCAATGAGCTTGACGAAGGC 59.551 55.000 0.00 0.00 36.97 4.35
1088 1582 1.043673 CCTTGGGTAGCCGCTAGAGT 61.044 60.000 6.45 0.00 0.00 3.24
1101 1595 3.142838 CCGCCATTGCTCCTTGGG 61.143 66.667 0.00 0.00 33.40 4.12
1159 1653 1.427020 GATCTTCTTGGCGCACTGC 59.573 57.895 10.83 0.00 45.38 4.40
1229 1723 1.558233 TGCATGAATGGTCCATTGCA 58.442 45.000 22.12 21.44 33.90 4.08
1230 1724 2.479837 CATGCATGAATGGTCCATTGC 58.520 47.619 22.59 19.16 33.90 3.56
1231 1725 2.696187 TCCATGCATGAATGGTCCATTG 59.304 45.455 28.82 9.64 46.24 2.82
1232 1726 3.035055 TCCATGCATGAATGGTCCATT 57.965 42.857 28.82 17.33 46.24 3.16
1236 1730 3.056821 CCATGATCCATGCATGAATGGTC 60.057 47.826 28.82 23.95 46.24 4.02
1238 1732 4.381932 CATCCATGATCCATGCATGAATGG 60.382 45.833 28.31 25.27 41.13 3.16
1242 1736 2.377193 TCCATCCATGATCCATGCATGA 59.623 45.455 28.31 14.16 41.13 3.07
1243 1737 2.492088 GTCCATCCATGATCCATGCATG 59.508 50.000 20.19 20.19 39.10 4.06
1245 1739 1.202964 GGTCCATCCATGATCCATGCA 60.203 52.381 0.00 0.00 40.20 3.96
1249 1743 1.625315 GATCGGTCCATCCATGATCCA 59.375 52.381 0.00 0.00 35.57 3.41
1257 1751 5.769162 AGTAAGTACTTAGATCGGTCCATCC 59.231 44.000 15.68 0.00 31.13 3.51
1272 1766 8.307582 AGCACCAATCAACTATAGTAAGTACT 57.692 34.615 5.65 0.00 40.24 2.73
1273 1767 9.460906 GTAGCACCAATCAACTATAGTAAGTAC 57.539 37.037 5.65 0.00 0.00 2.73
1276 1770 7.423199 TCGTAGCACCAATCAACTATAGTAAG 58.577 38.462 5.65 2.36 0.00 2.34
1279 1773 5.847111 TCGTAGCACCAATCAACTATAGT 57.153 39.130 0.00 0.00 0.00 2.12
1280 1774 5.569441 CGATCGTAGCACCAATCAACTATAG 59.431 44.000 7.03 0.00 0.00 1.31
1281 1775 5.239963 TCGATCGTAGCACCAATCAACTATA 59.760 40.000 15.94 0.00 0.00 1.31
1282 1776 4.037565 TCGATCGTAGCACCAATCAACTAT 59.962 41.667 15.94 0.00 0.00 2.12
1283 1777 3.379057 TCGATCGTAGCACCAATCAACTA 59.621 43.478 15.94 0.00 0.00 2.24
1284 1778 2.165641 TCGATCGTAGCACCAATCAACT 59.834 45.455 15.94 0.00 0.00 3.16
1289 1783 1.686587 TGGATCGATCGTAGCACCAAT 59.313 47.619 18.81 0.00 0.00 3.16
1363 1866 3.771160 ATCCCCGTCTGGTGCGAC 61.771 66.667 0.00 0.00 0.00 5.19
1583 2086 2.686106 GTGGTAGGCCCCGGAGAA 60.686 66.667 0.73 0.00 0.00 2.87
1584 2087 4.791069 GGTGGTAGGCCCCGGAGA 62.791 72.222 0.73 0.00 0.00 3.71
1591 2094 2.684655 TACGGGTGGTGGTAGGCC 60.685 66.667 0.00 0.00 0.00 5.19
1696 2208 3.620374 GCAACTGATCGAGTCACATGATT 59.380 43.478 0.00 0.00 31.73 2.57
1715 2234 9.321562 CTAACGAGATAAACTTATTTAGGGCAA 57.678 33.333 0.00 0.00 33.78 4.52
1737 2256 9.262358 CCTAGCTACTGATTGTAATTTCCTAAC 57.738 37.037 0.00 0.00 0.00 2.34
1741 2260 7.272978 TCACCTAGCTACTGATTGTAATTTCC 58.727 38.462 0.00 0.00 0.00 3.13
1742 2261 8.894768 ATCACCTAGCTACTGATTGTAATTTC 57.105 34.615 4.05 0.00 0.00 2.17
1748 2267 9.094578 ACATAATATCACCTAGCTACTGATTGT 57.905 33.333 12.41 8.99 0.00 2.71
1753 2277 8.894731 ACGATACATAATATCACCTAGCTACTG 58.105 37.037 0.00 0.00 0.00 2.74
1760 2284 6.844097 TGCCACGATACATAATATCACCTA 57.156 37.500 0.00 0.00 0.00 3.08
1792 2425 6.251163 CAGTGAAAATAAACCATGCACGTATG 59.749 38.462 0.00 0.00 0.00 2.39
1793 2426 6.321717 CAGTGAAAATAAACCATGCACGTAT 58.678 36.000 0.00 0.00 0.00 3.06
1802 2435 2.298729 GCAGGGCAGTGAAAATAAACCA 59.701 45.455 0.00 0.00 0.00 3.67
1851 2484 5.720202 ACGCGAGAGGAATTATATATGCAA 58.280 37.500 15.93 0.00 0.00 4.08
1852 2485 5.324784 ACGCGAGAGGAATTATATATGCA 57.675 39.130 15.93 0.00 0.00 3.96
1853 2486 6.310467 TCAAACGCGAGAGGAATTATATATGC 59.690 38.462 15.93 0.00 0.00 3.14
1854 2487 7.812309 TCAAACGCGAGAGGAATTATATATG 57.188 36.000 15.93 0.00 0.00 1.78
1866 2499 0.108804 TTAGCCCTCAAACGCGAGAG 60.109 55.000 15.93 16.55 34.79 3.20
1867 2500 0.535335 ATTAGCCCTCAAACGCGAGA 59.465 50.000 15.93 6.82 34.79 4.04
1868 2501 1.369625 AATTAGCCCTCAAACGCGAG 58.630 50.000 15.93 0.00 0.00 5.03
1869 2502 1.816074 AAATTAGCCCTCAAACGCGA 58.184 45.000 15.93 0.00 0.00 5.87
1870 2503 2.629639 AAAATTAGCCCTCAAACGCG 57.370 45.000 3.53 3.53 0.00 6.01
1871 2504 5.243426 TGATAAAATTAGCCCTCAAACGC 57.757 39.130 0.00 0.00 0.00 4.84
1872 2505 8.702163 AATTTGATAAAATTAGCCCTCAAACG 57.298 30.769 0.00 0.00 35.97 3.60
1907 2540 9.752961 CCATGATATTCACAGCAAATTAATCAA 57.247 29.630 0.00 0.00 0.00 2.57
1908 2541 8.916062 ACCATGATATTCACAGCAAATTAATCA 58.084 29.630 0.00 0.00 0.00 2.57
1909 2542 9.188588 CACCATGATATTCACAGCAAATTAATC 57.811 33.333 0.00 0.00 0.00 1.75
1910 2543 7.654520 GCACCATGATATTCACAGCAAATTAAT 59.345 33.333 0.00 0.00 0.00 1.40
1911 2544 6.979817 GCACCATGATATTCACAGCAAATTAA 59.020 34.615 0.00 0.00 0.00 1.40
1912 2545 6.461370 GGCACCATGATATTCACAGCAAATTA 60.461 38.462 0.00 0.00 0.00 1.40
1913 2546 5.353938 GCACCATGATATTCACAGCAAATT 58.646 37.500 0.00 0.00 0.00 1.82
1914 2547 4.202182 GGCACCATGATATTCACAGCAAAT 60.202 41.667 0.00 0.00 0.00 2.32
1915 2548 3.130869 GGCACCATGATATTCACAGCAAA 59.869 43.478 0.00 0.00 0.00 3.68
1916 2549 2.689471 GGCACCATGATATTCACAGCAA 59.311 45.455 0.00 0.00 0.00 3.91
1917 2550 2.300433 GGCACCATGATATTCACAGCA 58.700 47.619 0.00 0.00 0.00 4.41
1918 2551 2.300433 TGGCACCATGATATTCACAGC 58.700 47.619 0.00 0.00 0.00 4.40
1937 2570 4.604926 CTGGACTCAGGTGCATATGCATG 61.605 52.174 31.70 25.57 42.60 4.06
1938 2571 2.486727 CTGGACTCAGGTGCATATGCAT 60.487 50.000 31.70 15.95 42.60 3.96
1939 2572 1.134310 CTGGACTCAGGTGCATATGCA 60.134 52.381 26.32 26.32 42.60 3.96
1940 2573 1.590932 CTGGACTCAGGTGCATATGC 58.409 55.000 21.09 21.09 42.60 3.14
1941 2574 1.590932 GCTGGACTCAGGTGCATATG 58.409 55.000 0.00 0.00 42.60 1.78
1949 2582 1.786937 ATGGTCTAGCTGGACTCAGG 58.213 55.000 26.86 0.00 41.19 3.86
1950 2583 2.223688 CGAATGGTCTAGCTGGACTCAG 60.224 54.545 26.86 12.21 43.64 3.35
1951 2584 1.751351 CGAATGGTCTAGCTGGACTCA 59.249 52.381 26.86 22.34 36.55 3.41
1952 2585 1.751924 ACGAATGGTCTAGCTGGACTC 59.248 52.381 26.86 16.82 36.55 3.36
1953 2586 1.853963 ACGAATGGTCTAGCTGGACT 58.146 50.000 26.86 10.01 36.55 3.85
1954 2587 2.673368 CAAACGAATGGTCTAGCTGGAC 59.327 50.000 21.14 21.14 35.66 4.02
1955 2588 2.565391 TCAAACGAATGGTCTAGCTGGA 59.435 45.455 0.00 0.00 0.00 3.86
1956 2589 2.972625 TCAAACGAATGGTCTAGCTGG 58.027 47.619 0.00 0.00 0.00 4.85
1957 2590 5.812642 ACTATTCAAACGAATGGTCTAGCTG 59.187 40.000 0.00 0.00 39.58 4.24
1958 2591 5.978814 ACTATTCAAACGAATGGTCTAGCT 58.021 37.500 0.00 0.00 39.58 3.32
1959 2592 6.663944 AACTATTCAAACGAATGGTCTAGC 57.336 37.500 4.90 0.00 41.98 3.42
1960 2593 9.582431 TCTAAACTATTCAAACGAATGGTCTAG 57.418 33.333 4.90 5.49 41.98 2.43
1962 2595 9.449719 AATCTAAACTATTCAAACGAATGGTCT 57.550 29.630 4.90 0.00 41.98 3.85
1963 2596 9.490663 CAATCTAAACTATTCAAACGAATGGTC 57.509 33.333 4.90 0.00 41.98 4.02
1964 2597 7.968405 GCAATCTAAACTATTCAAACGAATGGT 59.032 33.333 0.00 0.00 43.93 3.55
1965 2598 8.184192 AGCAATCTAAACTATTCAAACGAATGG 58.816 33.333 0.00 0.00 37.38 3.16
1966 2599 9.559958 AAGCAATCTAAACTATTCAAACGAATG 57.440 29.630 0.00 0.00 34.85 2.67
1990 2623 4.926238 ACGACAGTTGAAGATGCTCTTAAG 59.074 41.667 0.00 0.00 36.73 1.85
1991 2624 4.883083 ACGACAGTTGAAGATGCTCTTAA 58.117 39.130 0.00 0.00 36.73 1.85
1992 2625 4.486090 GACGACAGTTGAAGATGCTCTTA 58.514 43.478 0.00 0.00 36.73 2.10
1993 2626 3.321497 GACGACAGTTGAAGATGCTCTT 58.679 45.455 0.00 0.00 39.87 2.85
1994 2627 2.353208 GGACGACAGTTGAAGATGCTCT 60.353 50.000 0.00 0.00 0.00 4.09
1995 2628 1.996191 GGACGACAGTTGAAGATGCTC 59.004 52.381 0.00 0.00 0.00 4.26
2003 2636 1.947146 CGCGTTGGACGACAGTTGA 60.947 57.895 4.46 0.00 46.05 3.18
2091 2724 1.792632 GCTACATTTTACCGCGGTTGC 60.793 52.381 38.94 21.57 37.91 4.17
2094 2727 1.698714 GCGCTACATTTTACCGCGGT 61.699 55.000 36.01 36.01 43.59 5.68
2126 2759 1.745115 ATTTTAGCGCGCCTGCTGA 60.745 52.632 30.33 9.86 46.70 4.26
2155 2788 3.063997 AGTTCAAAGTGTTTGTGCGAGAG 59.936 43.478 0.00 0.00 41.36 3.20
2156 2789 3.006940 AGTTCAAAGTGTTTGTGCGAGA 58.993 40.909 0.00 0.00 41.36 4.04
2158 2791 3.242608 GCTAGTTCAAAGTGTTTGTGCGA 60.243 43.478 0.00 0.00 41.36 5.10
2159 2792 3.035942 GCTAGTTCAAAGTGTTTGTGCG 58.964 45.455 0.00 0.00 41.36 5.34
2160 2793 4.027572 TGCTAGTTCAAAGTGTTTGTGC 57.972 40.909 0.00 0.00 41.36 4.57
2161 2794 7.189693 TCTATGCTAGTTCAAAGTGTTTGTG 57.810 36.000 0.00 0.00 41.36 3.33
2163 2796 9.371136 TCTATCTATGCTAGTTCAAAGTGTTTG 57.629 33.333 0.00 0.00 41.96 2.93
2165 2798 9.539825 CATCTATCTATGCTAGTTCAAAGTGTT 57.460 33.333 0.00 0.00 0.00 3.32
2166 2799 8.918116 TCATCTATCTATGCTAGTTCAAAGTGT 58.082 33.333 0.00 0.00 0.00 3.55
2167 2800 9.755804 TTCATCTATCTATGCTAGTTCAAAGTG 57.244 33.333 0.00 0.00 0.00 3.16
2168 2801 9.757227 GTTCATCTATCTATGCTAGTTCAAAGT 57.243 33.333 0.00 0.00 0.00 2.66
2169 2802 9.202273 GGTTCATCTATCTATGCTAGTTCAAAG 57.798 37.037 0.00 0.00 0.00 2.77
2171 2804 8.250143 TGGTTCATCTATCTATGCTAGTTCAA 57.750 34.615 0.00 0.00 0.00 2.69
2172 2805 7.839680 TGGTTCATCTATCTATGCTAGTTCA 57.160 36.000 0.00 0.00 0.00 3.18
2173 2806 9.796120 GTATGGTTCATCTATCTATGCTAGTTC 57.204 37.037 0.00 0.00 0.00 3.01
2174 2807 9.314133 TGTATGGTTCATCTATCTATGCTAGTT 57.686 33.333 0.00 0.00 0.00 2.24
2175 2808 8.885693 TGTATGGTTCATCTATCTATGCTAGT 57.114 34.615 0.00 0.00 0.00 2.57
2178 2811 9.486123 ACTATGTATGGTTCATCTATCTATGCT 57.514 33.333 0.00 0.00 0.00 3.79
2182 2815 9.088987 TGCAACTATGTATGGTTCATCTATCTA 57.911 33.333 0.00 0.00 28.36 1.98
2183 2816 7.966812 TGCAACTATGTATGGTTCATCTATCT 58.033 34.615 0.00 0.00 28.36 1.98
2184 2817 8.783833 ATGCAACTATGTATGGTTCATCTATC 57.216 34.615 0.00 0.00 30.01 2.08
2185 2818 9.881649 CTATGCAACTATGTATGGTTCATCTAT 57.118 33.333 0.00 0.00 33.61 1.98
2186 2819 9.088987 TCTATGCAACTATGTATGGTTCATCTA 57.911 33.333 0.00 0.72 33.02 1.98
2187 2820 7.966812 TCTATGCAACTATGTATGGTTCATCT 58.033 34.615 0.00 0.00 33.02 2.90
2188 2821 8.783833 ATCTATGCAACTATGTATGGTTCATC 57.216 34.615 0.00 0.00 33.02 2.92
2280 2960 3.493350 CCTCCCTAATGGAATCGTCACTG 60.493 52.174 0.00 0.00 44.57 3.66
2282 2962 2.807108 GCCTCCCTAATGGAATCGTCAC 60.807 54.545 0.00 0.00 44.57 3.67
2283 2963 1.416401 GCCTCCCTAATGGAATCGTCA 59.584 52.381 0.00 0.00 44.57 4.35
2284 2964 1.694696 AGCCTCCCTAATGGAATCGTC 59.305 52.381 0.00 0.00 44.57 4.20
2285 2965 1.807814 AGCCTCCCTAATGGAATCGT 58.192 50.000 0.00 0.00 44.57 3.73
2286 2966 2.104792 TGAAGCCTCCCTAATGGAATCG 59.895 50.000 0.00 0.00 44.57 3.34
2287 2967 3.864789 TGAAGCCTCCCTAATGGAATC 57.135 47.619 0.00 0.00 44.57 2.52
2288 2968 4.821532 ATTGAAGCCTCCCTAATGGAAT 57.178 40.909 0.00 0.00 44.57 3.01
2289 2969 4.104738 CCTATTGAAGCCTCCCTAATGGAA 59.895 45.833 0.00 0.00 44.57 3.53
2290 2970 3.652869 CCTATTGAAGCCTCCCTAATGGA 59.347 47.826 0.00 0.00 42.41 3.41
2291 2971 3.812167 GCCTATTGAAGCCTCCCTAATGG 60.812 52.174 0.00 0.00 0.00 3.16
2292 2972 3.073650 AGCCTATTGAAGCCTCCCTAATG 59.926 47.826 0.00 0.00 0.00 1.90
2293 2973 3.331120 AGCCTATTGAAGCCTCCCTAAT 58.669 45.455 0.00 0.00 0.00 1.73
2294 2974 2.776665 AGCCTATTGAAGCCTCCCTAA 58.223 47.619 0.00 0.00 0.00 2.69
2295 2975 2.496679 AGCCTATTGAAGCCTCCCTA 57.503 50.000 0.00 0.00 0.00 3.53
2296 2976 1.601248 AAGCCTATTGAAGCCTCCCT 58.399 50.000 0.00 0.00 0.00 4.20
2297 2977 3.481453 CTTAAGCCTATTGAAGCCTCCC 58.519 50.000 0.00 0.00 0.00 4.30
2298 2978 2.881513 GCTTAAGCCTATTGAAGCCTCC 59.118 50.000 17.00 0.00 38.68 4.30
2312 2992 2.801077 TTTGGAGGGTAGGCTTAAGC 57.199 50.000 19.53 19.53 41.14 3.09
2313 2993 4.855340 TGATTTTGGAGGGTAGGCTTAAG 58.145 43.478 0.00 0.00 0.00 1.85
2314 2994 4.938575 TGATTTTGGAGGGTAGGCTTAA 57.061 40.909 0.00 0.00 0.00 1.85
2315 2995 6.780198 ATATGATTTTGGAGGGTAGGCTTA 57.220 37.500 0.00 0.00 0.00 3.09
2316 2996 5.669798 ATATGATTTTGGAGGGTAGGCTT 57.330 39.130 0.00 0.00 0.00 4.35
2317 2997 5.669798 AATATGATTTTGGAGGGTAGGCT 57.330 39.130 0.00 0.00 0.00 4.58
2318 2998 7.523873 GCTTAAATATGATTTTGGAGGGTAGGC 60.524 40.741 0.00 0.00 0.00 3.93
2319 2999 7.725844 AGCTTAAATATGATTTTGGAGGGTAGG 59.274 37.037 0.00 0.00 0.00 3.18
2320 3000 8.697507 AGCTTAAATATGATTTTGGAGGGTAG 57.302 34.615 0.00 0.00 0.00 3.18
2322 3002 9.487442 TTTAGCTTAAATATGATTTTGGAGGGT 57.513 29.630 0.00 0.00 0.00 4.34
2323 3003 9.750125 GTTTAGCTTAAATATGATTTTGGAGGG 57.250 33.333 0.00 0.00 0.00 4.30
2351 3031 8.673711 GCACCAGAATATATTTGTCAAGTTGTA 58.326 33.333 2.11 0.00 0.00 2.41
2352 3032 7.394359 AGCACCAGAATATATTTGTCAAGTTGT 59.606 33.333 2.11 0.00 0.00 3.32
2353 3033 7.765307 AGCACCAGAATATATTTGTCAAGTTG 58.235 34.615 0.00 0.00 0.00 3.16
2354 3034 7.944729 AGCACCAGAATATATTTGTCAAGTT 57.055 32.000 0.00 0.00 0.00 2.66
2355 3035 7.944729 AAGCACCAGAATATATTTGTCAAGT 57.055 32.000 0.00 0.00 0.00 3.16
2356 3036 9.722056 GTAAAGCACCAGAATATATTTGTCAAG 57.278 33.333 0.00 0.00 0.00 3.02
2357 3037 9.237187 TGTAAAGCACCAGAATATATTTGTCAA 57.763 29.630 0.00 0.00 0.00 3.18
2358 3038 8.800370 TGTAAAGCACCAGAATATATTTGTCA 57.200 30.769 0.00 0.00 0.00 3.58
2359 3039 9.669353 CATGTAAAGCACCAGAATATATTTGTC 57.331 33.333 0.00 0.00 0.00 3.18
2360 3040 8.137437 GCATGTAAAGCACCAGAATATATTTGT 58.863 33.333 0.00 0.00 0.00 2.83
2361 3041 8.136800 TGCATGTAAAGCACCAGAATATATTTG 58.863 33.333 0.00 0.85 37.02 2.32
2362 3042 8.236585 TGCATGTAAAGCACCAGAATATATTT 57.763 30.769 0.00 0.00 37.02 1.40
2363 3043 7.822161 TGCATGTAAAGCACCAGAATATATT 57.178 32.000 0.00 0.00 37.02 1.28
2364 3044 7.285172 TGTTGCATGTAAAGCACCAGAATATAT 59.715 33.333 0.00 0.00 42.54 0.86
2365 3045 6.601217 TGTTGCATGTAAAGCACCAGAATATA 59.399 34.615 0.00 0.00 42.54 0.86
2366 3046 5.418524 TGTTGCATGTAAAGCACCAGAATAT 59.581 36.000 0.00 0.00 42.54 1.28
2367 3047 4.764308 TGTTGCATGTAAAGCACCAGAATA 59.236 37.500 0.00 0.00 42.54 1.75
2368 3048 3.573538 TGTTGCATGTAAAGCACCAGAAT 59.426 39.130 0.00 0.00 42.54 2.40
2369 3049 2.954989 TGTTGCATGTAAAGCACCAGAA 59.045 40.909 0.00 0.00 42.54 3.02
2370 3050 2.580962 TGTTGCATGTAAAGCACCAGA 58.419 42.857 0.00 0.00 42.54 3.86
2371 3051 3.367992 TTGTTGCATGTAAAGCACCAG 57.632 42.857 0.00 0.00 42.54 4.00
2372 3052 4.056740 CAATTGTTGCATGTAAAGCACCA 58.943 39.130 0.00 0.00 42.54 4.17
2373 3053 4.650545 CAATTGTTGCATGTAAAGCACC 57.349 40.909 0.00 0.00 42.54 5.01
2390 3070 6.532657 GTCTAATTAGCAAATGCAGTGCAATT 59.467 34.615 23.90 18.01 43.62 2.32
2391 3071 6.038356 GTCTAATTAGCAAATGCAGTGCAAT 58.962 36.000 23.90 11.71 43.62 3.56
2392 3072 5.183713 AGTCTAATTAGCAAATGCAGTGCAA 59.816 36.000 23.90 16.01 43.62 4.08
2393 3073 4.701651 AGTCTAATTAGCAAATGCAGTGCA 59.298 37.500 22.22 22.22 44.74 4.57
2394 3074 5.240713 AGTCTAATTAGCAAATGCAGTGC 57.759 39.130 15.57 15.57 45.16 4.40
2395 3075 7.280876 TCCTAAGTCTAATTAGCAAATGCAGTG 59.719 37.037 7.67 0.00 45.16 3.66
2396 3076 7.338710 TCCTAAGTCTAATTAGCAAATGCAGT 58.661 34.615 7.67 0.00 45.16 4.40
2397 3077 7.792374 TCCTAAGTCTAATTAGCAAATGCAG 57.208 36.000 7.67 0.00 45.16 4.41
2398 3078 8.574251 TTTCCTAAGTCTAATTAGCAAATGCA 57.426 30.769 7.67 0.00 45.16 3.96
2417 3097 9.192642 GGGTAGGCTTAAAACATAAATTTCCTA 57.807 33.333 0.00 0.00 0.00 2.94
2418 3098 7.899172 AGGGTAGGCTTAAAACATAAATTTCCT 59.101 33.333 0.00 0.00 0.00 3.36
2419 3099 8.074613 AGGGTAGGCTTAAAACATAAATTTCC 57.925 34.615 0.00 0.00 0.00 3.13
2420 3100 8.195436 GGAGGGTAGGCTTAAAACATAAATTTC 58.805 37.037 0.00 0.00 0.00 2.17
2421 3101 7.676468 TGGAGGGTAGGCTTAAAACATAAATTT 59.324 33.333 0.00 0.00 0.00 1.82
2422 3102 7.186268 TGGAGGGTAGGCTTAAAACATAAATT 58.814 34.615 0.00 0.00 0.00 1.82
2423 3103 6.737608 TGGAGGGTAGGCTTAAAACATAAAT 58.262 36.000 0.00 0.00 0.00 1.40
2424 3104 6.142259 TGGAGGGTAGGCTTAAAACATAAA 57.858 37.500 0.00 0.00 0.00 1.40
2425 3105 5.782677 TGGAGGGTAGGCTTAAAACATAA 57.217 39.130 0.00 0.00 0.00 1.90
2426 3106 5.782677 TTGGAGGGTAGGCTTAAAACATA 57.217 39.130 0.00 0.00 0.00 2.29
2427 3107 4.668138 TTGGAGGGTAGGCTTAAAACAT 57.332 40.909 0.00 0.00 0.00 2.71
2428 3108 4.202631 ACATTGGAGGGTAGGCTTAAAACA 60.203 41.667 0.00 0.00 0.00 2.83
2429 3109 4.341487 ACATTGGAGGGTAGGCTTAAAAC 58.659 43.478 0.00 0.00 0.00 2.43
2430 3110 4.569015 GGACATTGGAGGGTAGGCTTAAAA 60.569 45.833 0.00 0.00 0.00 1.52
2431 3111 3.053917 GGACATTGGAGGGTAGGCTTAAA 60.054 47.826 0.00 0.00 0.00 1.52
2432 3112 2.508300 GGACATTGGAGGGTAGGCTTAA 59.492 50.000 0.00 0.00 0.00 1.85
2433 3113 2.124411 GGACATTGGAGGGTAGGCTTA 58.876 52.381 0.00 0.00 0.00 3.09
2434 3114 0.919710 GGACATTGGAGGGTAGGCTT 59.080 55.000 0.00 0.00 0.00 4.35
2435 3115 0.044855 AGGACATTGGAGGGTAGGCT 59.955 55.000 0.00 0.00 0.00 4.58
2436 3116 0.181350 CAGGACATTGGAGGGTAGGC 59.819 60.000 0.00 0.00 0.00 3.93
2437 3117 0.181350 GCAGGACATTGGAGGGTAGG 59.819 60.000 0.00 0.00 0.00 3.18
2438 3118 1.207791 AGCAGGACATTGGAGGGTAG 58.792 55.000 0.00 0.00 0.00 3.18
2439 3119 2.023404 TCTAGCAGGACATTGGAGGGTA 60.023 50.000 0.00 0.00 0.00 3.69
2440 3120 1.207791 CTAGCAGGACATTGGAGGGT 58.792 55.000 0.00 0.00 0.00 4.34
2441 3121 1.500474 TCTAGCAGGACATTGGAGGG 58.500 55.000 0.00 0.00 0.00 4.30
2442 3122 3.474600 CAATCTAGCAGGACATTGGAGG 58.525 50.000 0.00 0.00 0.00 4.30
2443 3123 3.474600 CCAATCTAGCAGGACATTGGAG 58.525 50.000 11.45 0.00 45.69 3.86
2444 3124 2.421952 GCCAATCTAGCAGGACATTGGA 60.422 50.000 18.23 0.00 45.69 3.53
2445 3125 1.952296 GCCAATCTAGCAGGACATTGG 59.048 52.381 12.23 12.23 45.62 3.16
2446 3126 1.952296 GGCCAATCTAGCAGGACATTG 59.048 52.381 0.00 0.00 0.00 2.82
2447 3127 1.565759 TGGCCAATCTAGCAGGACATT 59.434 47.619 0.61 0.00 34.94 2.71
2448 3128 1.133976 GTGGCCAATCTAGCAGGACAT 60.134 52.381 7.24 0.00 43.55 3.06
2449 3129 0.253044 GTGGCCAATCTAGCAGGACA 59.747 55.000 7.24 0.00 38.35 4.02
2450 3130 0.543749 AGTGGCCAATCTAGCAGGAC 59.456 55.000 7.24 0.00 0.00 3.85
2451 3131 0.543277 CAGTGGCCAATCTAGCAGGA 59.457 55.000 7.24 0.00 0.00 3.86
2452 3132 0.465097 CCAGTGGCCAATCTAGCAGG 60.465 60.000 7.24 0.00 0.00 4.85
2453 3133 0.465097 CCCAGTGGCCAATCTAGCAG 60.465 60.000 7.24 0.00 0.00 4.24
2454 3134 1.207488 ACCCAGTGGCCAATCTAGCA 61.207 55.000 7.24 0.00 33.59 3.49
2455 3135 0.749454 CACCCAGTGGCCAATCTAGC 60.749 60.000 7.24 0.00 33.59 3.42
2456 3136 0.749454 GCACCCAGTGGCCAATCTAG 60.749 60.000 7.24 0.00 33.64 2.43
2457 3137 1.302949 GCACCCAGTGGCCAATCTA 59.697 57.895 7.24 0.00 33.64 1.98
2458 3138 2.036256 GCACCCAGTGGCCAATCT 59.964 61.111 7.24 0.00 33.64 2.40
2459 3139 1.907807 TTGCACCCAGTGGCCAATC 60.908 57.895 7.24 0.00 33.64 2.67
2460 3140 2.200930 TTGCACCCAGTGGCCAAT 59.799 55.556 7.24 1.65 33.64 3.16
2461 3141 2.000825 TAGTTGCACCCAGTGGCCAA 62.001 55.000 7.24 3.85 33.64 4.52
2462 3142 2.456443 TAGTTGCACCCAGTGGCCA 61.456 57.895 0.00 0.00 33.64 5.36
2463 3143 1.971695 GTAGTTGCACCCAGTGGCC 60.972 63.158 2.61 0.00 33.64 5.36
2464 3144 0.609131 ATGTAGTTGCACCCAGTGGC 60.609 55.000 2.61 0.00 33.64 5.01
2465 3145 2.779755 TATGTAGTTGCACCCAGTGG 57.220 50.000 0.63 0.63 33.64 4.00
2466 3146 6.942532 ATTATTATGTAGTTGCACCCAGTG 57.057 37.500 0.00 0.00 36.51 3.66
2467 3147 9.469097 TTTAATTATTATGTAGTTGCACCCAGT 57.531 29.630 0.00 0.00 0.00 4.00
2468 3148 9.730420 GTTTAATTATTATGTAGTTGCACCCAG 57.270 33.333 0.00 0.00 0.00 4.45
2469 3149 9.469097 AGTTTAATTATTATGTAGTTGCACCCA 57.531 29.630 0.00 0.00 0.00 4.51
2499 3179 4.017808 ACTCGGAGTAGTTCTAGTTGCAT 58.982 43.478 9.33 0.00 0.00 3.96
2643 3327 4.335647 CGGTGGAAGGCACTGGCT 62.336 66.667 0.00 0.00 40.86 4.75
2685 3369 4.070552 GAGAGGACGGCAAGGCGT 62.071 66.667 21.68 21.68 0.00 5.68
3059 3821 4.498520 AGCGCCCTGTCATCGACG 62.499 66.667 2.29 0.00 34.95 5.12
3061 3823 2.563050 CTTCAGCGCCCTGTCATCGA 62.563 60.000 2.29 0.00 40.09 3.59
3064 3826 2.437359 GCTTCAGCGCCCTGTCAT 60.437 61.111 2.29 0.00 40.09 3.06
3074 3836 3.191539 CTTCCTCGCCGCTTCAGC 61.192 66.667 0.00 0.00 37.78 4.26
3075 3837 3.191539 GCTTCCTCGCCGCTTCAG 61.192 66.667 0.00 0.00 0.00 3.02
3076 3838 3.939837 CTGCTTCCTCGCCGCTTCA 62.940 63.158 0.00 0.00 0.00 3.02
3126 3894 1.299648 GGCTATCCACACTGCCACA 59.700 57.895 0.00 0.00 44.34 4.17
3177 3955 3.401243 GATTTGGCGCCCTGCTTCG 62.401 63.158 26.77 0.00 45.43 3.79
3185 3963 3.937062 CGCGGTAGATTTGGCGCC 61.937 66.667 22.73 22.73 42.25 6.53
3228 4006 1.441349 GCGCGGTAAACGTTTGCAT 60.441 52.632 26.73 3.46 46.52 3.96
3229 4007 2.052060 GCGCGGTAAACGTTTGCA 60.052 55.556 26.73 5.44 46.52 4.08
3321 4133 4.158949 AGCTACCACGTGATACATGTGTTA 59.841 41.667 19.30 10.74 46.36 2.41
3322 4134 3.056107 AGCTACCACGTGATACATGTGTT 60.056 43.478 19.30 10.25 46.36 3.32
3323 4135 2.496070 AGCTACCACGTGATACATGTGT 59.504 45.455 19.30 0.10 46.36 3.72
3325 4137 3.697542 TGTAGCTACCACGTGATACATGT 59.302 43.478 19.30 2.69 33.47 3.21
3326 4138 4.042398 GTGTAGCTACCACGTGATACATG 58.958 47.826 19.30 0.71 0.00 3.21
3327 4139 3.952323 AGTGTAGCTACCACGTGATACAT 59.048 43.478 19.30 2.31 0.00 2.29
3328 4140 3.349927 AGTGTAGCTACCACGTGATACA 58.650 45.455 19.30 13.94 0.00 2.29
3329 4141 3.626670 AGAGTGTAGCTACCACGTGATAC 59.373 47.826 19.30 9.69 0.00 2.24
3330 4142 3.882444 AGAGTGTAGCTACCACGTGATA 58.118 45.455 19.30 2.24 0.00 2.15
3331 4143 2.724454 AGAGTGTAGCTACCACGTGAT 58.276 47.619 19.30 0.54 0.00 3.06
3332 4144 2.195741 AGAGTGTAGCTACCACGTGA 57.804 50.000 19.30 0.00 0.00 4.35
3333 4145 3.299340 AAAGAGTGTAGCTACCACGTG 57.701 47.619 21.01 9.08 0.00 4.49
3334 4146 5.656213 AATAAAGAGTGTAGCTACCACGT 57.344 39.130 21.01 7.84 0.00 4.49
3335 4147 6.963049 AAAATAAAGAGTGTAGCTACCACG 57.037 37.500 21.01 0.00 0.00 4.94
3383 4195 9.592720 CCGTGATTGTTCAAAAATAAAATTTCC 57.407 29.630 0.00 0.00 32.48 3.13
3384 4196 9.592720 CCCGTGATTGTTCAAAAATAAAATTTC 57.407 29.630 0.00 0.00 32.48 2.17
3385 4197 8.563732 CCCCGTGATTGTTCAAAAATAAAATTT 58.436 29.630 0.00 0.00 32.48 1.82
3386 4198 7.934120 TCCCCGTGATTGTTCAAAAATAAAATT 59.066 29.630 0.00 0.00 32.48 1.82
3387 4199 7.445945 TCCCCGTGATTGTTCAAAAATAAAAT 58.554 30.769 0.00 0.00 32.48 1.82
3388 4200 6.817184 TCCCCGTGATTGTTCAAAAATAAAA 58.183 32.000 0.00 0.00 32.48 1.52
3389 4201 6.406692 TCCCCGTGATTGTTCAAAAATAAA 57.593 33.333 0.00 0.00 32.48 1.40
3390 4202 6.597832 ATCCCCGTGATTGTTCAAAAATAA 57.402 33.333 0.00 0.00 32.48 1.40
3391 4203 6.350612 GGAATCCCCGTGATTGTTCAAAAATA 60.351 38.462 2.49 0.00 43.81 1.40
3392 4204 5.478407 GAATCCCCGTGATTGTTCAAAAAT 58.522 37.500 2.49 0.00 43.81 1.82
3393 4205 4.262249 GGAATCCCCGTGATTGTTCAAAAA 60.262 41.667 2.49 0.00 43.81 1.94
3394 4206 3.257127 GGAATCCCCGTGATTGTTCAAAA 59.743 43.478 2.49 0.00 43.81 2.44
3395 4207 2.823154 GGAATCCCCGTGATTGTTCAAA 59.177 45.455 2.49 0.00 43.81 2.69
3396 4208 2.224892 TGGAATCCCCGTGATTGTTCAA 60.225 45.455 0.00 0.00 43.81 2.69
3397 4209 1.352687 TGGAATCCCCGTGATTGTTCA 59.647 47.619 0.00 0.00 43.81 3.18
3398 4210 2.122783 TGGAATCCCCGTGATTGTTC 57.877 50.000 0.00 0.00 43.81 3.18
3399 4211 2.167662 GTTGGAATCCCCGTGATTGTT 58.832 47.619 0.00 0.00 43.81 2.83
3400 4212 1.354368 AGTTGGAATCCCCGTGATTGT 59.646 47.619 0.00 0.00 43.81 2.71
3401 4213 1.745087 CAGTTGGAATCCCCGTGATTG 59.255 52.381 0.00 0.00 43.81 2.67
3402 4214 1.340991 CCAGTTGGAATCCCCGTGATT 60.341 52.381 0.00 0.00 46.46 2.57
3403 4215 0.255890 CCAGTTGGAATCCCCGTGAT 59.744 55.000 0.00 0.00 37.93 3.06
3404 4216 0.838554 TCCAGTTGGAATCCCCGTGA 60.839 55.000 0.00 0.00 42.18 4.35
3405 4217 1.682849 TCCAGTTGGAATCCCCGTG 59.317 57.895 0.00 0.00 42.18 4.94
3406 4218 4.243550 TCCAGTTGGAATCCCCGT 57.756 55.556 0.00 0.00 42.18 5.28
3415 4227 4.264253 TCTTGAGTAATGCATCCAGTTGG 58.736 43.478 0.00 0.00 0.00 3.77
3416 4228 4.940046 ACTCTTGAGTAATGCATCCAGTTG 59.060 41.667 0.00 0.00 0.00 3.16
3417 4229 5.171339 ACTCTTGAGTAATGCATCCAGTT 57.829 39.130 0.00 0.00 0.00 3.16
3418 4230 4.383552 GGACTCTTGAGTAATGCATCCAGT 60.384 45.833 0.00 0.00 0.00 4.00
3419 4231 4.125703 GGACTCTTGAGTAATGCATCCAG 58.874 47.826 0.00 0.00 0.00 3.86
3420 4232 3.519107 TGGACTCTTGAGTAATGCATCCA 59.481 43.478 0.00 0.00 0.00 3.41
3421 4233 4.142609 TGGACTCTTGAGTAATGCATCC 57.857 45.455 0.00 0.00 0.00 3.51
3422 4234 5.181748 ACTTGGACTCTTGAGTAATGCATC 58.818 41.667 0.00 0.00 0.00 3.91
3423 4235 5.171339 ACTTGGACTCTTGAGTAATGCAT 57.829 39.130 3.00 0.00 0.00 3.96
3424 4236 4.623932 ACTTGGACTCTTGAGTAATGCA 57.376 40.909 3.00 0.00 0.00 3.96
3425 4237 6.092807 CCTTAACTTGGACTCTTGAGTAATGC 59.907 42.308 3.00 0.00 0.00 3.56
3426 4238 7.162082 ACCTTAACTTGGACTCTTGAGTAATG 58.838 38.462 3.00 1.41 0.00 1.90
3427 4239 7.317722 ACCTTAACTTGGACTCTTGAGTAAT 57.682 36.000 3.00 0.00 0.00 1.89
3428 4240 6.742559 ACCTTAACTTGGACTCTTGAGTAA 57.257 37.500 3.00 0.00 0.00 2.24
3429 4241 6.099269 ACAACCTTAACTTGGACTCTTGAGTA 59.901 38.462 3.00 0.00 0.00 2.59
3430 4242 5.104485 ACAACCTTAACTTGGACTCTTGAGT 60.104 40.000 2.59 2.59 0.00 3.41
3431 4243 5.368989 ACAACCTTAACTTGGACTCTTGAG 58.631 41.667 0.00 0.00 0.00 3.02
3432 4244 5.367945 ACAACCTTAACTTGGACTCTTGA 57.632 39.130 0.00 0.00 0.00 3.02
3433 4245 6.289064 ACTACAACCTTAACTTGGACTCTTG 58.711 40.000 0.00 0.00 0.00 3.02
3434 4246 6.464039 GGACTACAACCTTAACTTGGACTCTT 60.464 42.308 0.00 0.00 0.00 2.85
3435 4247 5.011840 GGACTACAACCTTAACTTGGACTCT 59.988 44.000 0.00 0.00 0.00 3.24
3436 4248 5.011840 AGGACTACAACCTTAACTTGGACTC 59.988 44.000 0.00 0.00 33.55 3.36
3437 4249 4.906060 AGGACTACAACCTTAACTTGGACT 59.094 41.667 0.00 0.00 33.55 3.85
3438 4250 5.224821 AGGACTACAACCTTAACTTGGAC 57.775 43.478 0.00 0.00 33.55 4.02
3439 4251 6.556116 AGTTAGGACTACAACCTTAACTTGGA 59.444 38.462 0.00 0.00 38.76 3.53
3440 4252 6.766429 AGTTAGGACTACAACCTTAACTTGG 58.234 40.000 0.00 0.00 38.76 3.61
3441 4253 9.768662 TTAAGTTAGGACTACAACCTTAACTTG 57.231 33.333 15.28 0.05 39.12 3.16
3442 4254 9.993454 CTTAAGTTAGGACTACAACCTTAACTT 57.007 33.333 12.11 12.11 40.24 2.66
3443 4255 9.372189 TCTTAAGTTAGGACTACAACCTTAACT 57.628 33.333 1.63 0.00 38.76 2.24
3444 4256 9.987272 TTCTTAAGTTAGGACTACAACCTTAAC 57.013 33.333 1.63 0.00 38.76 2.01
3447 4259 9.102453 AGATTCTTAAGTTAGGACTACAACCTT 57.898 33.333 1.63 0.00 38.76 3.50
3448 4260 8.667592 AGATTCTTAAGTTAGGACTACAACCT 57.332 34.615 1.63 0.00 41.05 3.50
3449 4261 9.722184 AAAGATTCTTAAGTTAGGACTACAACC 57.278 33.333 1.63 0.00 34.21 3.77
3461 4273 8.810041 TCGAGGGTACTAAAAGATTCTTAAGTT 58.190 33.333 15.59 4.08 0.00 2.66
3462 4274 8.358582 TCGAGGGTACTAAAAGATTCTTAAGT 57.641 34.615 15.02 15.02 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.