Multiple sequence alignment - TraesCS3D01G079500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G079500 chr3D 100.000 3826 0 0 1 3826 39428797 39432622 0.000000e+00 7066.0
1 TraesCS3D01G079500 chr3D 82.418 273 42 6 1071 1340 38006515 38006246 2.300000e-57 233.0
2 TraesCS3D01G079500 chrUn 91.475 1302 89 7 915 2199 287247941 287249237 0.000000e+00 1770.0
3 TraesCS3D01G079500 chrUn 91.475 1302 89 7 915 2199 287260254 287261550 0.000000e+00 1770.0
4 TraesCS3D01G079500 chrUn 91.475 1302 89 7 915 2199 318624068 318622772 0.000000e+00 1770.0
5 TraesCS3D01G079500 chrUn 91.475 1302 89 7 915 2199 318964856 318966152 0.000000e+00 1770.0
6 TraesCS3D01G079500 chrUn 91.475 1302 89 7 915 2199 323162618 323163914 0.000000e+00 1770.0
7 TraesCS3D01G079500 chrUn 88.729 763 48 10 2458 3191 312138562 312137809 0.000000e+00 898.0
8 TraesCS3D01G079500 chrUn 89.801 402 34 4 3427 3826 214924683 214925079 3.410000e-140 508.0
9 TraesCS3D01G079500 chrUn 89.801 402 34 4 3427 3826 351761858 351761462 3.410000e-140 508.0
10 TraesCS3D01G079500 chrUn 96.591 88 3 0 796 883 287247569 287247656 3.080000e-31 147.0
11 TraesCS3D01G079500 chrUn 96.591 88 3 0 796 883 287259882 287259969 3.080000e-31 147.0
12 TraesCS3D01G079500 chrUn 95.604 91 4 0 796 886 318624440 318624350 3.080000e-31 147.0
13 TraesCS3D01G079500 chrUn 96.591 88 3 0 796 883 318964484 318964571 3.080000e-31 147.0
14 TraesCS3D01G079500 chrUn 96.591 88 3 0 796 883 323162246 323162333 3.080000e-31 147.0
15 TraesCS3D01G079500 chrUn 100.000 34 0 0 2217 2250 287249236 287249269 3.190000e-06 63.9
16 TraesCS3D01G079500 chrUn 100.000 34 0 0 2217 2250 287261549 287261582 3.190000e-06 63.9
17 TraesCS3D01G079500 chrUn 100.000 34 0 0 2217 2250 318622773 318622740 3.190000e-06 63.9
18 TraesCS3D01G079500 chrUn 100.000 34 0 0 2217 2250 318966151 318966184 3.190000e-06 63.9
19 TraesCS3D01G079500 chrUn 100.000 34 0 0 2217 2250 323163913 323163946 3.190000e-06 63.9
20 TraesCS3D01G079500 chr3A 89.174 1404 104 19 990 2367 50984788 50986169 0.000000e+00 1707.0
21 TraesCS3D01G079500 chr3A 86.802 788 63 17 2407 3170 51005160 51005930 0.000000e+00 841.0
22 TraesCS3D01G079500 chr3A 90.870 230 13 4 746 970 50969029 50969255 6.210000e-78 302.0
23 TraesCS3D01G079500 chr3A 78.796 382 50 11 3427 3795 51013169 51013532 1.070000e-55 228.0
24 TraesCS3D01G079500 chr3B 92.462 650 40 5 1021 1670 62976355 62976995 0.000000e+00 920.0
25 TraesCS3D01G079500 chr3B 87.332 742 82 10 1 733 794317522 794318260 0.000000e+00 839.0
26 TraesCS3D01G079500 chr3B 92.509 534 38 1 1666 2199 62977105 62977636 0.000000e+00 763.0
27 TraesCS3D01G079500 chr1B 88.060 737 54 15 1 733 544759834 544760540 0.000000e+00 843.0
28 TraesCS3D01G079500 chr4B 95.510 245 11 0 3185 3429 302845422 302845666 3.580000e-105 392.0
29 TraesCS3D01G079500 chr2B 95.122 246 12 0 3185 3430 120234300 120234055 4.640000e-104 388.0
30 TraesCS3D01G079500 chr1D 94.737 247 13 0 3185 3431 397751060 397751306 6.000000e-103 385.0
31 TraesCS3D01G079500 chr6D 94.715 246 12 1 3185 3429 108674152 108673907 7.760000e-102 381.0
32 TraesCS3D01G079500 chr4D 94.694 245 13 0 3185 3429 395403400 395403156 7.760000e-102 381.0
33 TraesCS3D01G079500 chr5D 94.309 246 14 0 3185 3430 517961338 517961093 1.000000e-100 377.0
34 TraesCS3D01G079500 chr4A 94.000 250 14 1 3185 3433 585122496 585122745 1.000000e-100 377.0
35 TraesCS3D01G079500 chr2D 93.651 252 16 0 3185 3436 398505287 398505538 1.000000e-100 377.0
36 TraesCS3D01G079500 chr7D 91.791 268 18 4 3185 3448 499792603 499792870 1.680000e-98 370.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G079500 chr3D 39428797 39432622 3825 False 7066.0 7066 100.0000 1 3826 1 chr3D.!!$F1 3825
1 TraesCS3D01G079500 chrUn 312137809 312138562 753 True 898.0 898 88.7290 2458 3191 1 chrUn.!!$R1 733
2 TraesCS3D01G079500 chrUn 287247569 287249269 1700 False 660.3 1770 96.0220 796 2250 3 chrUn.!!$F2 1454
3 TraesCS3D01G079500 chrUn 287259882 287261582 1700 False 660.3 1770 96.0220 796 2250 3 chrUn.!!$F3 1454
4 TraesCS3D01G079500 chrUn 318622740 318624440 1700 True 660.3 1770 95.6930 796 2250 3 chrUn.!!$R3 1454
5 TraesCS3D01G079500 chrUn 318964484 318966184 1700 False 660.3 1770 96.0220 796 2250 3 chrUn.!!$F4 1454
6 TraesCS3D01G079500 chrUn 323162246 323163946 1700 False 660.3 1770 96.0220 796 2250 3 chrUn.!!$F5 1454
7 TraesCS3D01G079500 chr3A 50984788 50986169 1381 False 1707.0 1707 89.1740 990 2367 1 chr3A.!!$F2 1377
8 TraesCS3D01G079500 chr3A 51005160 51005930 770 False 841.0 841 86.8020 2407 3170 1 chr3A.!!$F3 763
9 TraesCS3D01G079500 chr3B 62976355 62977636 1281 False 841.5 920 92.4855 1021 2199 2 chr3B.!!$F2 1178
10 TraesCS3D01G079500 chr3B 794317522 794318260 738 False 839.0 839 87.3320 1 733 1 chr3B.!!$F1 732
11 TraesCS3D01G079500 chr1B 544759834 544760540 706 False 843.0 843 88.0600 1 733 1 chr1B.!!$F1 732

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
462 466 0.035152 TGCCATCATCTTCGCCAAGT 60.035 50.0 0.0 0.0 0.0 3.16 F
793 797 0.036448 TCTCCTCGTCTCTCCGTTGT 59.964 55.0 0.0 0.0 0.0 3.32 F
2055 2459 0.095245 CTCGCACCAATACAAGCACG 59.905 55.0 0.0 0.0 0.0 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2332 2768 0.443869 CACGGCCAATCGAGAACAAG 59.556 55.000 2.24 0.0 0.00 3.16 R
2570 3007 0.460311 ATAACACGAGGCGGGAAGAG 59.540 55.000 0.00 0.0 32.98 2.85 R
3356 3868 1.134521 TGAGTGCAAGTTTGACCGAGT 60.135 47.619 0.00 0.0 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 4.659172 CCTTGCCCACCTTGCCGA 62.659 66.667 0.00 0.00 0.00 5.54
55 56 1.286880 CCTTGCCGACCAAAGCTTG 59.713 57.895 0.00 0.00 31.94 4.01
86 87 4.021981 TGAGCATACTTATCTGGGACATCG 60.022 45.833 0.00 0.00 38.20 3.84
146 147 3.388308 CTTAGATGGCTGAGTGATTCCG 58.612 50.000 0.00 0.00 0.00 4.30
169 170 1.062810 GTAGGGGGAGAGGATGACTGT 60.063 57.143 0.00 0.00 0.00 3.55
221 222 2.204244 ACCCGTTCCCAATCCCCT 60.204 61.111 0.00 0.00 0.00 4.79
235 236 0.326927 TCCCCTAGGCAGAAAAACCG 59.673 55.000 2.05 0.00 0.00 4.44
257 259 3.927142 GGACTGTGTAAAGATTGTCCTCG 59.073 47.826 0.00 0.00 40.34 4.63
278 280 1.073923 AGGGGACGAAACTTGCAATCT 59.926 47.619 0.00 0.00 0.00 2.40
298 300 2.740055 CGCTAGATCCCATGCCGC 60.740 66.667 0.00 0.00 0.00 6.53
300 302 1.072159 GCTAGATCCCATGCCGCTT 59.928 57.895 0.00 0.00 0.00 4.68
371 375 1.906105 GAACCACCGCCATCCACCTA 61.906 60.000 0.00 0.00 0.00 3.08
372 376 1.279025 AACCACCGCCATCCACCTAT 61.279 55.000 0.00 0.00 0.00 2.57
373 377 1.071471 CCACCGCCATCCACCTATC 59.929 63.158 0.00 0.00 0.00 2.08
374 378 1.071471 CACCGCCATCCACCTATCC 59.929 63.158 0.00 0.00 0.00 2.59
375 379 2.343758 CCGCCATCCACCTATCCG 59.656 66.667 0.00 0.00 0.00 4.18
376 380 2.357517 CGCCATCCACCTATCCGC 60.358 66.667 0.00 0.00 0.00 5.54
377 381 2.032681 GCCATCCACCTATCCGCC 59.967 66.667 0.00 0.00 0.00 6.13
378 382 2.520536 GCCATCCACCTATCCGCCT 61.521 63.158 0.00 0.00 0.00 5.52
379 383 1.674057 CCATCCACCTATCCGCCTC 59.326 63.158 0.00 0.00 0.00 4.70
380 384 0.833834 CCATCCACCTATCCGCCTCT 60.834 60.000 0.00 0.00 0.00 3.69
381 385 0.319728 CATCCACCTATCCGCCTCTG 59.680 60.000 0.00 0.00 0.00 3.35
382 386 0.833834 ATCCACCTATCCGCCTCTGG 60.834 60.000 0.00 0.00 0.00 3.86
383 387 2.423446 CACCTATCCGCCTCTGGC 59.577 66.667 0.00 0.00 46.75 4.85
392 396 4.996434 GCCTCTGGCGGCGCATAT 62.996 66.667 34.36 0.00 39.62 1.78
393 397 2.281070 CCTCTGGCGGCGCATATT 60.281 61.111 34.36 0.00 0.00 1.28
394 398 1.893808 CCTCTGGCGGCGCATATTT 60.894 57.895 34.36 0.00 0.00 1.40
395 399 1.447317 CCTCTGGCGGCGCATATTTT 61.447 55.000 34.36 0.00 0.00 1.82
396 400 0.381801 CTCTGGCGGCGCATATTTTT 59.618 50.000 34.36 0.00 0.00 1.94
397 401 0.380378 TCTGGCGGCGCATATTTTTC 59.620 50.000 34.36 13.93 0.00 2.29
398 402 0.594796 CTGGCGGCGCATATTTTTCC 60.595 55.000 34.36 13.15 0.00 3.13
399 403 1.034838 TGGCGGCGCATATTTTTCCT 61.035 50.000 34.36 0.00 0.00 3.36
400 404 0.317854 GGCGGCGCATATTTTTCCTC 60.318 55.000 34.36 7.46 0.00 3.71
401 405 0.657368 GCGGCGCATATTTTTCCTCG 60.657 55.000 29.21 0.00 0.00 4.63
402 406 0.655733 CGGCGCATATTTTTCCTCGT 59.344 50.000 10.83 0.00 0.00 4.18
403 407 1.862201 CGGCGCATATTTTTCCTCGTA 59.138 47.619 10.83 0.00 0.00 3.43
404 408 2.096909 CGGCGCATATTTTTCCTCGTAG 60.097 50.000 10.83 0.00 0.00 3.51
405 409 3.128349 GGCGCATATTTTTCCTCGTAGA 58.872 45.455 10.83 0.00 0.00 2.59
406 410 3.059800 GGCGCATATTTTTCCTCGTAGAC 60.060 47.826 10.83 0.00 0.00 2.59
407 411 3.361724 GCGCATATTTTTCCTCGTAGACG 60.362 47.826 0.30 0.00 41.45 4.18
409 413 4.085721 CGCATATTTTTCCTCGTAGACGAC 60.086 45.833 0.00 0.00 44.22 4.34
423 427 4.198625 CGACGTCGTCTAGGTCCT 57.801 61.111 29.08 0.00 39.36 3.85
424 428 2.005220 CGACGTCGTCTAGGTCCTC 58.995 63.158 29.08 0.00 39.36 3.71
425 429 1.427592 CGACGTCGTCTAGGTCCTCC 61.428 65.000 29.08 0.00 39.36 4.30
426 430 3.759404 CGACGTCGTCTAGGTCCTCCT 62.759 61.905 29.08 0.00 39.36 3.69
427 431 0.107752 ACGTCGTCTAGGTCCTCCTC 60.108 60.000 0.00 0.00 43.94 3.71
428 432 0.178533 CGTCGTCTAGGTCCTCCTCT 59.821 60.000 0.00 0.00 43.94 3.69
429 433 1.807377 CGTCGTCTAGGTCCTCCTCTC 60.807 61.905 0.00 0.00 43.94 3.20
430 434 0.464870 TCGTCTAGGTCCTCCTCTCG 59.535 60.000 0.00 0.00 43.94 4.04
431 435 0.533308 CGTCTAGGTCCTCCTCTCGG 60.533 65.000 0.00 0.00 43.94 4.63
432 436 0.838608 GTCTAGGTCCTCCTCTCGGA 59.161 60.000 0.00 0.00 43.94 4.55
450 454 4.119363 GCCCCAGCTCTGCCATCA 62.119 66.667 0.00 0.00 35.50 3.07
451 455 2.924640 CCCCAGCTCTGCCATCAT 59.075 61.111 0.00 0.00 0.00 2.45
452 456 1.228184 CCCCAGCTCTGCCATCATC 60.228 63.158 0.00 0.00 0.00 2.92
453 457 1.706995 CCCCAGCTCTGCCATCATCT 61.707 60.000 0.00 0.00 0.00 2.90
454 458 0.183014 CCCAGCTCTGCCATCATCTT 59.817 55.000 0.00 0.00 0.00 2.40
455 459 1.595466 CCAGCTCTGCCATCATCTTC 58.405 55.000 0.00 0.00 0.00 2.87
456 460 1.218763 CAGCTCTGCCATCATCTTCG 58.781 55.000 0.00 0.00 0.00 3.79
457 461 0.532417 AGCTCTGCCATCATCTTCGC 60.532 55.000 0.00 0.00 0.00 4.70
458 462 1.505477 GCTCTGCCATCATCTTCGCC 61.505 60.000 0.00 0.00 0.00 5.54
459 463 0.179065 CTCTGCCATCATCTTCGCCA 60.179 55.000 0.00 0.00 0.00 5.69
460 464 0.252761 TCTGCCATCATCTTCGCCAA 59.747 50.000 0.00 0.00 0.00 4.52
461 465 0.661552 CTGCCATCATCTTCGCCAAG 59.338 55.000 0.00 0.00 0.00 3.61
462 466 0.035152 TGCCATCATCTTCGCCAAGT 60.035 50.000 0.00 0.00 0.00 3.16
463 467 0.659957 GCCATCATCTTCGCCAAGTC 59.340 55.000 0.00 0.00 0.00 3.01
464 468 0.933097 CCATCATCTTCGCCAAGTCG 59.067 55.000 0.00 0.00 0.00 4.18
465 469 0.302890 CATCATCTTCGCCAAGTCGC 59.697 55.000 0.00 0.00 0.00 5.19
466 470 0.108186 ATCATCTTCGCCAAGTCGCA 60.108 50.000 0.00 0.00 0.00 5.10
467 471 0.320334 TCATCTTCGCCAAGTCGCAA 60.320 50.000 0.00 0.00 0.00 4.85
468 472 0.095935 CATCTTCGCCAAGTCGCAAG 59.904 55.000 0.00 0.00 0.00 4.01
469 473 0.320771 ATCTTCGCCAAGTCGCAAGT 60.321 50.000 0.00 0.00 39.48 3.16
470 474 1.205064 CTTCGCCAAGTCGCAAGTG 59.795 57.895 0.00 0.00 39.48 3.16
471 475 2.175184 CTTCGCCAAGTCGCAAGTGG 62.175 60.000 0.00 0.00 39.48 4.00
472 476 2.652382 TTCGCCAAGTCGCAAGTGGA 62.652 55.000 0.00 0.00 33.10 4.02
473 477 2.671177 CGCCAAGTCGCAAGTGGAG 61.671 63.158 0.00 0.00 33.10 3.86
474 478 1.598130 GCCAAGTCGCAAGTGGAGT 60.598 57.895 0.00 0.00 33.10 3.85
475 479 1.166531 GCCAAGTCGCAAGTGGAGTT 61.167 55.000 0.00 0.00 33.10 3.01
476 480 1.308998 CCAAGTCGCAAGTGGAGTTT 58.691 50.000 0.00 0.00 33.10 2.66
477 481 1.002468 CCAAGTCGCAAGTGGAGTTTG 60.002 52.381 0.00 0.00 33.10 2.93
478 482 1.939934 CAAGTCGCAAGTGGAGTTTGA 59.060 47.619 0.00 0.00 39.48 2.69
479 483 2.549754 CAAGTCGCAAGTGGAGTTTGAT 59.450 45.455 0.00 0.00 39.48 2.57
480 484 2.417719 AGTCGCAAGTGGAGTTTGATC 58.582 47.619 0.00 0.00 39.48 2.92
481 485 1.464997 GTCGCAAGTGGAGTTTGATCC 59.535 52.381 0.00 0.00 40.03 3.36
482 486 0.443869 CGCAAGTGGAGTTTGATCCG 59.556 55.000 0.00 0.00 42.77 4.18
483 487 0.804989 GCAAGTGGAGTTTGATCCGG 59.195 55.000 0.00 0.00 42.77 5.14
484 488 1.610624 GCAAGTGGAGTTTGATCCGGA 60.611 52.381 6.61 6.61 42.77 5.14
485 489 2.076863 CAAGTGGAGTTTGATCCGGAC 58.923 52.381 6.12 0.90 42.77 4.79
486 490 0.246635 AGTGGAGTTTGATCCGGACG 59.753 55.000 6.12 0.00 42.77 4.79
487 491 1.079405 TGGAGTTTGATCCGGACGC 60.079 57.895 6.12 1.92 42.77 5.19
488 492 1.814169 GGAGTTTGATCCGGACGCC 60.814 63.158 6.12 0.71 0.00 5.68
489 493 1.218316 GAGTTTGATCCGGACGCCT 59.782 57.895 6.12 0.00 0.00 5.52
490 494 0.806492 GAGTTTGATCCGGACGCCTC 60.806 60.000 6.12 0.00 0.00 4.70
491 495 1.814169 GTTTGATCCGGACGCCTCC 60.814 63.158 6.12 0.00 0.00 4.30
509 513 4.851179 GACGCCCCCGATCCAACC 62.851 72.222 0.00 0.00 38.29 3.77
512 516 3.728373 GCCCCCGATCCAACCACT 61.728 66.667 0.00 0.00 0.00 4.00
513 517 2.272146 CCCCCGATCCAACCACTG 59.728 66.667 0.00 0.00 0.00 3.66
514 518 2.438434 CCCCGATCCAACCACTGC 60.438 66.667 0.00 0.00 0.00 4.40
515 519 2.438434 CCCGATCCAACCACTGCC 60.438 66.667 0.00 0.00 0.00 4.85
516 520 2.350895 CCGATCCAACCACTGCCA 59.649 61.111 0.00 0.00 0.00 4.92
517 521 1.077501 CCGATCCAACCACTGCCAT 60.078 57.895 0.00 0.00 0.00 4.40
518 522 1.097547 CCGATCCAACCACTGCCATC 61.098 60.000 0.00 0.00 0.00 3.51
519 523 1.431488 CGATCCAACCACTGCCATCG 61.431 60.000 0.00 0.00 32.91 3.84
520 524 1.718757 GATCCAACCACTGCCATCGC 61.719 60.000 0.00 0.00 0.00 4.58
521 525 2.202236 ATCCAACCACTGCCATCGCT 62.202 55.000 0.00 0.00 35.36 4.93
522 526 1.078497 CCAACCACTGCCATCGCTA 60.078 57.895 0.00 0.00 35.36 4.26
523 527 1.369091 CCAACCACTGCCATCGCTAC 61.369 60.000 0.00 0.00 35.36 3.58
524 528 1.078426 AACCACTGCCATCGCTACC 60.078 57.895 0.00 0.00 35.36 3.18
525 529 1.553690 AACCACTGCCATCGCTACCT 61.554 55.000 0.00 0.00 35.36 3.08
526 530 1.522355 CCACTGCCATCGCTACCTG 60.522 63.158 0.00 0.00 35.36 4.00
527 531 1.517361 CACTGCCATCGCTACCTGA 59.483 57.895 0.00 0.00 35.36 3.86
528 532 0.108186 CACTGCCATCGCTACCTGAA 60.108 55.000 0.00 0.00 35.36 3.02
529 533 0.108138 ACTGCCATCGCTACCTGAAC 60.108 55.000 0.00 0.00 35.36 3.18
530 534 0.811616 CTGCCATCGCTACCTGAACC 60.812 60.000 0.00 0.00 35.36 3.62
531 535 1.523938 GCCATCGCTACCTGAACCC 60.524 63.158 0.00 0.00 0.00 4.11
532 536 1.972660 GCCATCGCTACCTGAACCCT 61.973 60.000 0.00 0.00 0.00 4.34
533 537 1.410004 CCATCGCTACCTGAACCCTA 58.590 55.000 0.00 0.00 0.00 3.53
534 538 1.760613 CCATCGCTACCTGAACCCTAA 59.239 52.381 0.00 0.00 0.00 2.69
535 539 2.483188 CCATCGCTACCTGAACCCTAAC 60.483 54.545 0.00 0.00 0.00 2.34
536 540 1.188863 TCGCTACCTGAACCCTAACC 58.811 55.000 0.00 0.00 0.00 2.85
537 541 0.177373 CGCTACCTGAACCCTAACCC 59.823 60.000 0.00 0.00 0.00 4.11
538 542 0.177373 GCTACCTGAACCCTAACCCG 59.823 60.000 0.00 0.00 0.00 5.28
539 543 1.856629 CTACCTGAACCCTAACCCGA 58.143 55.000 0.00 0.00 0.00 5.14
540 544 1.479730 CTACCTGAACCCTAACCCGAC 59.520 57.143 0.00 0.00 0.00 4.79
541 545 1.217244 CCTGAACCCTAACCCGACG 59.783 63.158 0.00 0.00 0.00 5.12
542 546 1.538687 CCTGAACCCTAACCCGACGT 61.539 60.000 0.00 0.00 0.00 4.34
543 547 1.176527 CTGAACCCTAACCCGACGTA 58.823 55.000 0.00 0.00 0.00 3.57
544 548 1.133790 CTGAACCCTAACCCGACGTAG 59.866 57.143 0.00 0.00 0.00 3.51
545 549 1.271871 TGAACCCTAACCCGACGTAGA 60.272 52.381 0.00 0.00 0.00 2.59
546 550 2.027385 GAACCCTAACCCGACGTAGAT 58.973 52.381 0.00 0.00 0.00 1.98
547 551 1.685148 ACCCTAACCCGACGTAGATC 58.315 55.000 0.00 0.00 0.00 2.75
548 552 1.064463 ACCCTAACCCGACGTAGATCA 60.064 52.381 0.00 0.00 0.00 2.92
549 553 2.026641 CCCTAACCCGACGTAGATCAA 58.973 52.381 0.00 0.00 0.00 2.57
550 554 2.626743 CCCTAACCCGACGTAGATCAAT 59.373 50.000 0.00 0.00 0.00 2.57
551 555 3.305199 CCCTAACCCGACGTAGATCAATC 60.305 52.174 0.00 0.00 0.00 2.67
552 556 2.486951 AACCCGACGTAGATCAATCG 57.513 50.000 0.00 0.00 0.00 3.34
556 560 1.755161 CGACGTAGATCAATCGGGTG 58.245 55.000 0.00 0.00 0.00 4.61
557 561 1.065102 CGACGTAGATCAATCGGGTGT 59.935 52.381 0.00 0.00 0.00 4.16
558 562 2.479049 CGACGTAGATCAATCGGGTGTT 60.479 50.000 0.00 0.00 0.00 3.32
559 563 2.858344 GACGTAGATCAATCGGGTGTTG 59.142 50.000 0.00 0.00 0.00 3.33
560 564 1.593006 CGTAGATCAATCGGGTGTTGC 59.407 52.381 0.00 0.00 0.00 4.17
561 565 2.627945 GTAGATCAATCGGGTGTTGCA 58.372 47.619 0.00 0.00 0.00 4.08
562 566 1.742761 AGATCAATCGGGTGTTGCAG 58.257 50.000 0.00 0.00 0.00 4.41
563 567 1.278985 AGATCAATCGGGTGTTGCAGA 59.721 47.619 0.00 0.00 0.00 4.26
564 568 2.083774 GATCAATCGGGTGTTGCAGAA 58.916 47.619 0.00 0.00 0.00 3.02
565 569 1.974265 TCAATCGGGTGTTGCAGAAA 58.026 45.000 0.00 0.00 0.00 2.52
566 570 1.606668 TCAATCGGGTGTTGCAGAAAC 59.393 47.619 0.00 0.00 39.41 2.78
567 571 0.958822 AATCGGGTGTTGCAGAAACC 59.041 50.000 6.08 6.08 38.06 3.27
573 577 2.583143 GGTGTTGCAGAAACCCTAACT 58.417 47.619 3.73 0.00 38.06 2.24
574 578 2.552743 GGTGTTGCAGAAACCCTAACTC 59.447 50.000 3.73 0.00 38.06 3.01
575 579 2.552743 GTGTTGCAGAAACCCTAACTCC 59.447 50.000 0.00 0.00 38.06 3.85
576 580 2.160205 GTTGCAGAAACCCTAACTCCC 58.840 52.381 0.00 0.00 32.13 4.30
577 581 0.323629 TGCAGAAACCCTAACTCCCG 59.676 55.000 0.00 0.00 0.00 5.14
578 582 0.323957 GCAGAAACCCTAACTCCCGT 59.676 55.000 0.00 0.00 0.00 5.28
579 583 1.675116 GCAGAAACCCTAACTCCCGTC 60.675 57.143 0.00 0.00 0.00 4.79
580 584 1.900486 CAGAAACCCTAACTCCCGTCT 59.100 52.381 0.00 0.00 0.00 4.18
581 585 2.094130 CAGAAACCCTAACTCCCGTCTC 60.094 54.545 0.00 0.00 0.00 3.36
582 586 0.893447 AAACCCTAACTCCCGTCTCG 59.107 55.000 0.00 0.00 0.00 4.04
583 587 1.602327 AACCCTAACTCCCGTCTCGC 61.602 60.000 0.00 0.00 0.00 5.03
584 588 1.753463 CCCTAACTCCCGTCTCGCT 60.753 63.158 0.00 0.00 0.00 4.93
585 589 1.726533 CCCTAACTCCCGTCTCGCTC 61.727 65.000 0.00 0.00 0.00 5.03
586 590 1.726533 CCTAACTCCCGTCTCGCTCC 61.727 65.000 0.00 0.00 0.00 4.70
587 591 1.001764 TAACTCCCGTCTCGCTCCA 60.002 57.895 0.00 0.00 0.00 3.86
588 592 1.030488 TAACTCCCGTCTCGCTCCAG 61.030 60.000 0.00 0.00 0.00 3.86
589 593 3.522731 CTCCCGTCTCGCTCCAGG 61.523 72.222 0.00 0.00 0.00 4.45
592 596 3.068691 CCGTCTCGCTCCAGGGAA 61.069 66.667 0.00 0.00 36.54 3.97
593 597 2.427245 CCGTCTCGCTCCAGGGAAT 61.427 63.158 0.00 0.00 36.54 3.01
594 598 1.066587 CGTCTCGCTCCAGGGAATC 59.933 63.158 0.00 0.00 36.54 2.52
595 599 1.066587 GTCTCGCTCCAGGGAATCG 59.933 63.158 3.98 3.98 36.54 3.34
596 600 1.076995 TCTCGCTCCAGGGAATCGA 60.077 57.895 10.56 10.56 36.54 3.59
597 601 0.468214 TCTCGCTCCAGGGAATCGAT 60.468 55.000 11.19 0.00 36.54 3.59
598 602 0.038709 CTCGCTCCAGGGAATCGATC 60.039 60.000 0.00 0.00 36.54 3.69
599 603 0.755327 TCGCTCCAGGGAATCGATCA 60.755 55.000 0.00 0.00 33.89 2.92
600 604 0.104855 CGCTCCAGGGAATCGATCAA 59.895 55.000 0.00 0.00 0.00 2.57
601 605 1.871408 CGCTCCAGGGAATCGATCAAG 60.871 57.143 0.00 0.00 0.00 3.02
602 606 1.542108 GCTCCAGGGAATCGATCAAGG 60.542 57.143 0.00 0.00 0.00 3.61
603 607 0.469917 TCCAGGGAATCGATCAAGGC 59.530 55.000 0.00 0.00 0.00 4.35
604 608 0.536006 CCAGGGAATCGATCAAGGCC 60.536 60.000 0.00 0.00 0.00 5.19
605 609 0.882042 CAGGGAATCGATCAAGGCCG 60.882 60.000 0.00 0.00 0.00 6.13
606 610 1.598130 GGGAATCGATCAAGGCCGG 60.598 63.158 0.00 0.00 0.00 6.13
607 611 1.598130 GGAATCGATCAAGGCCGGG 60.598 63.158 2.18 0.00 0.00 5.73
608 612 2.203209 AATCGATCAAGGCCGGGC 60.203 61.111 22.67 22.67 0.00 6.13
609 613 4.609018 ATCGATCAAGGCCGGGCG 62.609 66.667 23.81 9.72 0.00 6.13
621 625 3.550431 CGGGCGGTGATCCAGGAT 61.550 66.667 0.00 0.00 0.00 3.24
622 626 2.427753 GGGCGGTGATCCAGGATC 59.572 66.667 21.42 21.42 39.31 3.36
623 627 2.029666 GGCGGTGATCCAGGATCG 59.970 66.667 22.41 13.71 41.51 3.69
624 628 2.663188 GCGGTGATCCAGGATCGC 60.663 66.667 28.75 28.75 45.50 4.58
627 631 2.427753 GTGATCCAGGATCGCCCC 59.572 66.667 27.07 11.07 41.90 5.80
628 632 3.233980 TGATCCAGGATCGCCCCG 61.234 66.667 22.41 0.00 41.51 5.73
629 633 3.234730 GATCCAGGATCGCCCCGT 61.235 66.667 14.02 0.00 34.66 5.28
630 634 3.521529 GATCCAGGATCGCCCCGTG 62.522 68.421 14.02 0.00 34.66 4.94
631 635 4.770362 TCCAGGATCGCCCCGTGA 62.770 66.667 0.00 0.00 34.66 4.35
632 636 3.550431 CCAGGATCGCCCCGTGAT 61.550 66.667 0.00 0.00 35.33 3.06
633 637 2.029666 CAGGATCGCCCCGTGATC 59.970 66.667 6.64 6.64 45.50 2.92
636 640 2.663188 GATCGCCCCGTGATCAGC 60.663 66.667 9.70 0.00 45.53 4.26
637 641 3.157217 GATCGCCCCGTGATCAGCT 62.157 63.158 9.70 0.00 45.53 4.24
638 642 3.157217 ATCGCCCCGTGATCAGCTC 62.157 63.158 0.00 0.00 0.00 4.09
640 644 3.838271 GCCCCGTGATCAGCTCGA 61.838 66.667 0.00 0.00 35.64 4.04
641 645 2.892640 CCCCGTGATCAGCTCGAA 59.107 61.111 0.00 0.00 35.64 3.71
642 646 1.443407 CCCCGTGATCAGCTCGAAT 59.557 57.895 0.00 0.00 35.64 3.34
643 647 0.598680 CCCCGTGATCAGCTCGAATC 60.599 60.000 0.00 0.00 35.64 2.52
644 648 0.387202 CCCGTGATCAGCTCGAATCT 59.613 55.000 0.00 0.00 35.64 2.40
645 649 1.609072 CCCGTGATCAGCTCGAATCTA 59.391 52.381 0.00 0.00 35.64 1.98
646 650 2.230025 CCCGTGATCAGCTCGAATCTAT 59.770 50.000 0.00 0.00 35.64 1.98
647 651 3.497118 CCGTGATCAGCTCGAATCTATC 58.503 50.000 0.00 0.00 35.64 2.08
648 652 3.497118 CGTGATCAGCTCGAATCTATCC 58.503 50.000 0.00 0.00 35.64 2.59
649 653 3.671971 CGTGATCAGCTCGAATCTATCCC 60.672 52.174 0.00 0.00 35.64 3.85
650 654 3.256879 GTGATCAGCTCGAATCTATCCCA 59.743 47.826 0.00 0.00 0.00 4.37
651 655 3.509184 TGATCAGCTCGAATCTATCCCAG 59.491 47.826 0.00 0.00 0.00 4.45
652 656 2.950781 TCAGCTCGAATCTATCCCAGT 58.049 47.619 0.00 0.00 0.00 4.00
653 657 3.300388 TCAGCTCGAATCTATCCCAGTT 58.700 45.455 0.00 0.00 0.00 3.16
654 658 3.706594 TCAGCTCGAATCTATCCCAGTTT 59.293 43.478 0.00 0.00 0.00 2.66
655 659 3.806521 CAGCTCGAATCTATCCCAGTTTG 59.193 47.826 0.00 0.00 0.00 2.93
656 660 3.706594 AGCTCGAATCTATCCCAGTTTGA 59.293 43.478 0.00 0.00 0.00 2.69
657 661 4.346418 AGCTCGAATCTATCCCAGTTTGAT 59.654 41.667 0.00 0.00 0.00 2.57
658 662 4.688413 GCTCGAATCTATCCCAGTTTGATC 59.312 45.833 0.00 0.00 0.00 2.92
659 663 4.871513 TCGAATCTATCCCAGTTTGATCG 58.128 43.478 0.00 0.00 0.00 3.69
660 664 3.990469 CGAATCTATCCCAGTTTGATCGG 59.010 47.826 0.00 0.00 0.00 4.18
661 665 4.319177 GAATCTATCCCAGTTTGATCGGG 58.681 47.826 0.00 0.00 41.76 5.14
662 666 2.047061 TCTATCCCAGTTTGATCGGGG 58.953 52.381 3.10 0.00 42.73 5.73
663 667 1.072331 CTATCCCAGTTTGATCGGGGG 59.928 57.143 3.10 2.36 41.89 5.40
664 668 1.229690 TCCCAGTTTGATCGGGGGA 60.230 57.895 3.10 4.54 45.34 4.81
665 669 1.224592 CCCAGTTTGATCGGGGGAG 59.775 63.158 0.00 0.00 41.49 4.30
666 670 1.224592 CCAGTTTGATCGGGGGAGG 59.775 63.158 0.00 0.00 0.00 4.30
667 671 1.271840 CCAGTTTGATCGGGGGAGGA 61.272 60.000 0.00 0.00 0.00 3.71
668 672 0.618458 CAGTTTGATCGGGGGAGGAA 59.382 55.000 0.00 0.00 0.00 3.36
669 673 0.912486 AGTTTGATCGGGGGAGGAAG 59.088 55.000 0.00 0.00 0.00 3.46
670 674 0.107165 GTTTGATCGGGGGAGGAAGG 60.107 60.000 0.00 0.00 0.00 3.46
671 675 0.252974 TTTGATCGGGGGAGGAAGGA 60.253 55.000 0.00 0.00 0.00 3.36
672 676 0.981277 TTGATCGGGGGAGGAAGGAC 60.981 60.000 0.00 0.00 0.00 3.85
673 677 1.382695 GATCGGGGGAGGAAGGACA 60.383 63.158 0.00 0.00 0.00 4.02
674 678 1.687297 GATCGGGGGAGGAAGGACAC 61.687 65.000 0.00 0.00 0.00 3.67
675 679 3.771160 CGGGGGAGGAAGGACACG 61.771 72.222 0.00 0.00 0.00 4.49
676 680 3.400054 GGGGGAGGAAGGACACGG 61.400 72.222 0.00 0.00 0.00 4.94
677 681 2.606826 GGGGAGGAAGGACACGGT 60.607 66.667 0.00 0.00 0.00 4.83
678 682 2.657066 GGGGAGGAAGGACACGGTC 61.657 68.421 0.00 0.00 0.00 4.79
679 683 1.609794 GGGAGGAAGGACACGGTCT 60.610 63.158 4.41 0.00 32.47 3.85
680 684 1.605971 GGGAGGAAGGACACGGTCTC 61.606 65.000 4.41 0.00 32.47 3.36
681 685 1.507174 GAGGAAGGACACGGTCTCG 59.493 63.158 4.41 0.00 43.02 4.04
682 686 0.959372 GAGGAAGGACACGGTCTCGA 60.959 60.000 4.41 0.00 40.11 4.04
683 687 1.212229 GGAAGGACACGGTCTCGAC 59.788 63.158 4.41 0.00 40.11 4.20
684 688 1.154263 GAAGGACACGGTCTCGACG 60.154 63.158 4.41 0.00 40.11 5.12
685 689 2.524636 GAAGGACACGGTCTCGACGG 62.525 65.000 0.00 3.45 40.11 4.79
686 690 4.773117 GGACACGGTCTCGACGGC 62.773 72.222 0.00 0.00 40.11 5.68
694 698 4.345962 TCTCGACGGCGGCGAAAA 62.346 61.111 38.41 26.26 37.32 2.29
695 699 3.408020 CTCGACGGCGGCGAAAAA 61.408 61.111 38.41 17.29 37.32 1.94
696 700 2.736682 CTCGACGGCGGCGAAAAAT 61.737 57.895 38.41 15.77 37.32 1.82
697 701 2.276430 CGACGGCGGCGAAAAATC 60.276 61.111 38.93 22.66 0.00 2.17
698 702 2.864589 GACGGCGGCGAAAAATCA 59.135 55.556 38.93 0.00 0.00 2.57
699 703 1.511254 GACGGCGGCGAAAAATCAC 60.511 57.895 38.93 13.37 0.00 3.06
700 704 2.202427 CGGCGGCGAAAAATCACC 60.202 61.111 29.19 0.00 0.00 4.02
701 705 2.686816 CGGCGGCGAAAAATCACCT 61.687 57.895 29.19 0.00 0.00 4.00
702 706 1.136774 GGCGGCGAAAAATCACCTC 59.863 57.895 12.98 0.00 0.00 3.85
703 707 1.226018 GCGGCGAAAAATCACCTCG 60.226 57.895 12.98 0.00 35.70 4.63
704 708 1.423845 CGGCGAAAAATCACCTCGG 59.576 57.895 0.00 0.00 33.23 4.63
705 709 1.800681 GGCGAAAAATCACCTCGGG 59.199 57.895 0.00 0.00 33.23 5.14
706 710 0.675522 GGCGAAAAATCACCTCGGGA 60.676 55.000 0.00 0.00 33.23 5.14
707 711 0.727398 GCGAAAAATCACCTCGGGAG 59.273 55.000 0.00 0.00 33.23 4.30
708 712 1.674817 GCGAAAAATCACCTCGGGAGA 60.675 52.381 0.00 0.00 33.23 3.71
709 713 2.695359 CGAAAAATCACCTCGGGAGAA 58.305 47.619 0.00 0.00 39.18 2.87
710 714 2.673368 CGAAAAATCACCTCGGGAGAAG 59.327 50.000 0.00 0.00 39.18 2.85
711 715 2.115343 AAAATCACCTCGGGAGAAGC 57.885 50.000 0.00 0.00 39.18 3.86
712 716 1.280457 AAATCACCTCGGGAGAAGCT 58.720 50.000 0.00 0.00 39.18 3.74
713 717 2.160721 AATCACCTCGGGAGAAGCTA 57.839 50.000 0.00 0.00 39.18 3.32
714 718 2.160721 ATCACCTCGGGAGAAGCTAA 57.839 50.000 0.00 0.00 39.18 3.09
715 719 1.933021 TCACCTCGGGAGAAGCTAAA 58.067 50.000 0.00 0.00 39.18 1.85
716 720 2.253610 TCACCTCGGGAGAAGCTAAAA 58.746 47.619 0.00 0.00 39.18 1.52
717 721 2.028385 TCACCTCGGGAGAAGCTAAAAC 60.028 50.000 0.00 0.00 39.18 2.43
718 722 1.278413 ACCTCGGGAGAAGCTAAAACC 59.722 52.381 0.00 0.00 39.18 3.27
719 723 1.407025 CCTCGGGAGAAGCTAAAACCC 60.407 57.143 0.00 7.77 39.18 4.11
720 724 1.555533 CTCGGGAGAAGCTAAAACCCT 59.444 52.381 13.63 0.00 39.18 4.34
721 725 2.764572 CTCGGGAGAAGCTAAAACCCTA 59.235 50.000 13.63 5.01 39.18 3.53
722 726 2.764572 TCGGGAGAAGCTAAAACCCTAG 59.235 50.000 13.63 0.00 38.51 3.02
723 727 2.742204 CGGGAGAAGCTAAAACCCTAGC 60.742 54.545 13.63 0.00 43.95 3.42
729 733 2.226602 GCTAAAACCCTAGCGAGAGG 57.773 55.000 0.00 0.00 35.31 3.69
735 739 3.941081 CCTAGCGAGAGGGAAGCA 58.059 61.111 0.00 0.00 32.39 3.91
736 740 2.202866 CCTAGCGAGAGGGAAGCAA 58.797 57.895 0.00 0.00 32.39 3.91
737 741 0.755686 CCTAGCGAGAGGGAAGCAAT 59.244 55.000 0.00 0.00 32.39 3.56
738 742 1.964223 CCTAGCGAGAGGGAAGCAATA 59.036 52.381 0.00 0.00 32.39 1.90
739 743 2.564947 CCTAGCGAGAGGGAAGCAATAT 59.435 50.000 0.00 0.00 32.39 1.28
740 744 3.764434 CCTAGCGAGAGGGAAGCAATATA 59.236 47.826 0.00 0.00 32.39 0.86
741 745 3.951775 AGCGAGAGGGAAGCAATATAG 57.048 47.619 0.00 0.00 0.00 1.31
742 746 3.235200 AGCGAGAGGGAAGCAATATAGT 58.765 45.455 0.00 0.00 0.00 2.12
743 747 3.643792 AGCGAGAGGGAAGCAATATAGTT 59.356 43.478 0.00 0.00 0.00 2.24
744 748 3.991121 GCGAGAGGGAAGCAATATAGTTC 59.009 47.826 0.00 0.00 0.00 3.01
745 749 4.561105 CGAGAGGGAAGCAATATAGTTCC 58.439 47.826 3.14 3.14 39.31 3.62
751 755 5.948992 GGAAGCAATATAGTTCCCATGTC 57.051 43.478 0.00 0.00 34.72 3.06
752 756 4.452455 GGAAGCAATATAGTTCCCATGTCG 59.548 45.833 0.00 0.00 34.72 4.35
753 757 4.689612 AGCAATATAGTTCCCATGTCGT 57.310 40.909 0.00 0.00 0.00 4.34
754 758 4.380531 AGCAATATAGTTCCCATGTCGTG 58.619 43.478 0.00 0.00 0.00 4.35
755 759 4.127171 GCAATATAGTTCCCATGTCGTGT 58.873 43.478 0.00 0.00 0.00 4.49
756 760 5.069914 AGCAATATAGTTCCCATGTCGTGTA 59.930 40.000 0.00 0.00 0.00 2.90
757 761 5.932303 GCAATATAGTTCCCATGTCGTGTAT 59.068 40.000 0.00 0.00 0.00 2.29
758 762 6.128553 GCAATATAGTTCCCATGTCGTGTATG 60.129 42.308 0.00 0.00 0.00 2.39
759 763 2.691409 AGTTCCCATGTCGTGTATGG 57.309 50.000 7.91 7.91 43.77 2.74
760 764 1.906574 AGTTCCCATGTCGTGTATGGT 59.093 47.619 12.09 0.00 42.85 3.55
761 765 2.093658 AGTTCCCATGTCGTGTATGGTC 60.094 50.000 12.09 5.24 42.85 4.02
762 766 0.458260 TCCCATGTCGTGTATGGTCG 59.542 55.000 12.09 0.00 42.85 4.79
763 767 0.458260 CCCATGTCGTGTATGGTCGA 59.542 55.000 12.09 0.00 42.85 4.20
764 768 1.068588 CCCATGTCGTGTATGGTCGAT 59.931 52.381 12.09 0.00 42.85 3.59
765 769 2.394708 CCATGTCGTGTATGGTCGATC 58.605 52.381 0.00 0.00 40.15 3.69
766 770 2.044135 CATGTCGTGTATGGTCGATCG 58.956 52.381 9.36 9.36 38.32 3.69
767 771 1.371595 TGTCGTGTATGGTCGATCGA 58.628 50.000 15.15 15.15 38.32 3.59
768 772 1.944709 TGTCGTGTATGGTCGATCGAT 59.055 47.619 22.50 8.10 38.32 3.59
769 773 2.032290 TGTCGTGTATGGTCGATCGATC 60.032 50.000 22.50 21.98 38.32 3.69
782 786 2.343101 GATCGATCGATCTCTCCTCGT 58.657 52.381 38.45 14.59 45.42 4.18
783 787 1.785768 TCGATCGATCTCTCCTCGTC 58.214 55.000 22.43 0.00 37.40 4.20
784 788 1.341852 TCGATCGATCTCTCCTCGTCT 59.658 52.381 22.43 0.00 37.40 4.18
785 789 1.724623 CGATCGATCTCTCCTCGTCTC 59.275 57.143 22.43 0.00 37.40 3.36
786 790 2.609491 CGATCGATCTCTCCTCGTCTCT 60.609 54.545 22.43 0.00 37.40 3.10
787 791 2.519377 TCGATCTCTCCTCGTCTCTC 57.481 55.000 0.00 0.00 37.40 3.20
788 792 1.069513 TCGATCTCTCCTCGTCTCTCC 59.930 57.143 0.00 0.00 37.40 3.71
789 793 1.508632 GATCTCTCCTCGTCTCTCCG 58.491 60.000 0.00 0.00 0.00 4.63
790 794 0.834612 ATCTCTCCTCGTCTCTCCGT 59.165 55.000 0.00 0.00 0.00 4.69
791 795 0.614294 TCTCTCCTCGTCTCTCCGTT 59.386 55.000 0.00 0.00 0.00 4.44
792 796 0.730265 CTCTCCTCGTCTCTCCGTTG 59.270 60.000 0.00 0.00 0.00 4.10
793 797 0.036448 TCTCCTCGTCTCTCCGTTGT 59.964 55.000 0.00 0.00 0.00 3.32
794 798 0.882474 CTCCTCGTCTCTCCGTTGTT 59.118 55.000 0.00 0.00 0.00 2.83
805 809 0.179124 TCCGTTGTTGCCTTTGTTGC 60.179 50.000 0.00 0.00 0.00 4.17
815 819 0.106521 CCTTTGTTGCCTTGTTGGGG 59.893 55.000 0.00 0.00 36.00 4.96
850 854 3.430931 GAAACGGAAGAGATGAGACTCG 58.569 50.000 0.00 0.00 41.25 4.18
883 887 1.135721 AGCCCATTAACGTACGAGTCC 59.864 52.381 24.41 1.66 0.00 3.85
886 890 3.587923 CCCATTAACGTACGAGTCCAAA 58.412 45.455 24.41 6.71 0.00 3.28
887 891 4.186159 CCCATTAACGTACGAGTCCAAAT 58.814 43.478 24.41 8.66 0.00 2.32
889 893 4.033587 CCATTAACGTACGAGTCCAAATGG 59.966 45.833 24.41 22.19 35.00 3.16
898 902 3.614806 TCCAAATGGAATGCCCGC 58.385 55.556 0.00 0.00 42.18 6.13
899 903 2.057408 TCCAAATGGAATGCCCGCC 61.057 57.895 0.00 0.00 42.18 6.13
902 906 1.077357 AAATGGAATGCCCGCCGTA 60.077 52.632 0.00 0.00 37.93 4.02
903 907 0.681564 AAATGGAATGCCCGCCGTAA 60.682 50.000 0.00 0.00 37.93 3.18
904 908 1.101049 AATGGAATGCCCGCCGTAAG 61.101 55.000 0.00 0.00 37.93 2.34
905 909 1.978455 ATGGAATGCCCGCCGTAAGA 61.978 55.000 0.00 0.00 37.33 2.10
906 910 1.887707 GGAATGCCCGCCGTAAGAG 60.888 63.158 0.00 0.00 43.02 2.85
907 911 1.887707 GAATGCCCGCCGTAAGAGG 60.888 63.158 0.00 0.00 43.02 3.69
908 912 2.306255 GAATGCCCGCCGTAAGAGGA 62.306 60.000 0.00 0.00 43.02 3.71
909 913 1.696097 AATGCCCGCCGTAAGAGGAT 61.696 55.000 0.00 0.00 43.02 3.24
910 914 0.830444 ATGCCCGCCGTAAGAGGATA 60.830 55.000 0.00 0.00 43.02 2.59
911 915 0.830444 TGCCCGCCGTAAGAGGATAT 60.830 55.000 0.00 0.00 43.02 1.63
912 916 0.320697 GCCCGCCGTAAGAGGATATT 59.679 55.000 0.00 0.00 43.02 1.28
913 917 1.939838 GCCCGCCGTAAGAGGATATTG 60.940 57.143 0.00 0.00 43.02 1.90
971 1228 1.820519 ACCGCAACAGATCAATGCAAT 59.179 42.857 14.94 2.69 40.04 3.56
972 1229 2.190161 CCGCAACAGATCAATGCAATG 58.810 47.619 14.94 0.00 40.04 2.82
973 1230 1.586578 CGCAACAGATCAATGCAATGC 59.413 47.619 14.94 0.00 40.04 3.56
974 1231 2.612604 GCAACAGATCAATGCAATGCA 58.387 42.857 11.44 11.44 44.86 3.96
975 1232 2.997303 GCAACAGATCAATGCAATGCAA 59.003 40.909 13.45 0.00 43.62 4.08
981 1238 2.166821 TCAATGCAATGCAACCAACC 57.833 45.000 13.45 0.00 43.62 3.77
1016 1273 1.808411 ACAGATCAAAATCACGGCGT 58.192 45.000 6.77 6.77 34.07 5.68
1142 1406 4.410400 CGTCTCAAGGGGGTGGCC 62.410 72.222 0.00 0.00 0.00 5.36
1157 1421 4.593864 GCCCGACCTCATCTCCGC 62.594 72.222 0.00 0.00 0.00 5.54
1242 1506 2.065906 GACAAGAAAAACCCGCCGCA 62.066 55.000 0.00 0.00 0.00 5.69
1443 1718 2.039084 ACCAATGGAGGTGAAGACACTC 59.961 50.000 6.16 0.00 45.32 3.51
1446 1721 1.699730 TGGAGGTGAAGACACTCGAA 58.300 50.000 0.00 0.00 45.32 3.71
1685 2083 4.193826 TGTACTTCTTGGCAGATGAGAC 57.806 45.455 0.00 0.00 0.00 3.36
1769 2167 1.000896 CACGGAAAGGCAATCCCCT 60.001 57.895 3.35 0.00 36.58 4.79
1770 2168 0.254747 CACGGAAAGGCAATCCCCTA 59.745 55.000 3.35 0.00 33.97 3.53
1874 2272 3.684788 AGTCGAAGCACAAACATATGGAC 59.315 43.478 7.80 0.86 0.00 4.02
1876 2274 3.435327 TCGAAGCACAAACATATGGACAC 59.565 43.478 7.80 0.00 0.00 3.67
2055 2459 0.095245 CTCGCACCAATACAAGCACG 59.905 55.000 0.00 0.00 0.00 5.34
2070 2474 0.451383 GCACGCATGTTATGAAGGCA 59.549 50.000 0.00 0.00 0.00 4.75
2077 2481 3.679502 GCATGTTATGAAGGCACCAAAAC 59.320 43.478 0.00 0.00 0.00 2.43
2103 2507 4.924305 TGGAGATAGAATTGCCATTTGC 57.076 40.909 0.00 0.00 41.77 3.68
2118 2522 3.319755 CATTTGCAACTTTCGCTTCCAT 58.680 40.909 0.00 0.00 0.00 3.41
2332 2768 4.344102 TGCACCCTAGTGTATGAAGTATCC 59.656 45.833 0.00 0.00 46.35 2.59
2367 2803 6.821031 TGGCCGTGTACAGTTAAATTTATT 57.179 33.333 0.00 0.00 0.00 1.40
2368 2804 6.844254 TGGCCGTGTACAGTTAAATTTATTC 58.156 36.000 0.00 0.00 0.00 1.75
2369 2805 6.655848 TGGCCGTGTACAGTTAAATTTATTCT 59.344 34.615 0.00 0.00 0.00 2.40
2370 2806 7.175293 TGGCCGTGTACAGTTAAATTTATTCTT 59.825 33.333 0.00 0.00 0.00 2.52
2371 2807 7.695201 GGCCGTGTACAGTTAAATTTATTCTTC 59.305 37.037 0.00 0.00 0.00 2.87
2372 2808 8.448615 GCCGTGTACAGTTAAATTTATTCTTCT 58.551 33.333 0.00 0.00 0.00 2.85
2373 2809 9.968743 CCGTGTACAGTTAAATTTATTCTTCTC 57.031 33.333 0.00 0.00 0.00 2.87
2377 2813 9.989869 GTACAGTTAAATTTATTCTTCTCTGCC 57.010 33.333 0.00 0.00 0.00 4.85
2378 2814 8.635765 ACAGTTAAATTTATTCTTCTCTGCCA 57.364 30.769 0.00 0.00 0.00 4.92
2379 2815 9.247861 ACAGTTAAATTTATTCTTCTCTGCCAT 57.752 29.630 0.00 0.00 0.00 4.40
2388 2824 8.762481 TTATTCTTCTCTGCCATACTAGTACA 57.238 34.615 4.31 0.00 0.00 2.90
2389 2825 7.847711 ATTCTTCTCTGCCATACTAGTACAT 57.152 36.000 4.31 0.00 0.00 2.29
2390 2826 6.641169 TCTTCTCTGCCATACTAGTACATG 57.359 41.667 4.31 1.47 0.00 3.21
2391 2827 4.855715 TCTCTGCCATACTAGTACATGC 57.144 45.455 4.31 8.75 0.00 4.06
2392 2828 4.215109 TCTCTGCCATACTAGTACATGCA 58.785 43.478 17.16 17.16 0.00 3.96
2393 2829 4.038042 TCTCTGCCATACTAGTACATGCAC 59.962 45.833 15.20 0.00 0.00 4.57
2394 2830 3.704061 TCTGCCATACTAGTACATGCACA 59.296 43.478 15.20 6.42 0.00 4.57
2395 2831 3.792401 TGCCATACTAGTACATGCACAC 58.208 45.455 15.20 0.00 0.00 3.82
2396 2832 3.196685 TGCCATACTAGTACATGCACACA 59.803 43.478 15.20 3.18 0.00 3.72
2397 2833 4.188462 GCCATACTAGTACATGCACACAA 58.812 43.478 4.31 0.00 0.00 3.33
2398 2834 4.816385 GCCATACTAGTACATGCACACAAT 59.184 41.667 4.31 0.00 0.00 2.71
2399 2835 5.296780 GCCATACTAGTACATGCACACAATT 59.703 40.000 4.31 0.00 0.00 2.32
2400 2836 6.481976 GCCATACTAGTACATGCACACAATTA 59.518 38.462 4.31 0.00 0.00 1.40
2401 2837 7.011950 GCCATACTAGTACATGCACACAATTAA 59.988 37.037 4.31 0.00 0.00 1.40
2402 2838 8.888716 CCATACTAGTACATGCACACAATTAAA 58.111 33.333 4.31 0.00 0.00 1.52
2405 2841 8.615878 ACTAGTACATGCACACAATTAAAAGA 57.384 30.769 0.00 0.00 0.00 2.52
2409 2845 7.862372 AGTACATGCACACAATTAAAAGACAAG 59.138 33.333 0.00 0.00 0.00 3.16
2570 3007 1.394697 CCGACAACGATGCAAAACAC 58.605 50.000 0.00 0.00 42.66 3.32
2607 3044 9.976511 TCGTGTTATCTTTATAGGGATTTGTAG 57.023 33.333 0.00 0.00 0.00 2.74
2766 3241 7.397476 ACTTATCTAGTGAGGTTGTCAATCTCA 59.603 37.037 22.14 22.14 36.74 3.27
2786 3261 8.934507 ATCTCACTAAGATTTGTAGTACAAGC 57.065 34.615 15.06 11.64 42.30 4.01
2934 3410 3.008330 CAGTGGCATCTCTCCAAGAAAG 58.992 50.000 0.00 0.00 37.61 2.62
2990 3484 8.883954 ATTGACTATACATCTCATGACAACTG 57.116 34.615 0.00 0.00 0.00 3.16
3055 3559 9.203421 GAGAAAGAAACAAAGAAAACCAAAGAA 57.797 29.630 0.00 0.00 0.00 2.52
3104 3608 4.968181 GGAGAAAGAAACGAAGAAAAACCG 59.032 41.667 0.00 0.00 0.00 4.44
3151 3663 0.741915 GGAAAGCGTGTGAAAACCCA 59.258 50.000 0.00 0.00 0.00 4.51
3156 3668 1.938861 CGTGTGAAAACCCAGGTCG 59.061 57.895 0.00 0.00 0.00 4.79
3171 3683 3.127895 CCAGGTCGTTTTGTTCAAGTTCA 59.872 43.478 0.00 0.00 0.00 3.18
3172 3684 4.095610 CAGGTCGTTTTGTTCAAGTTCAC 58.904 43.478 0.00 0.00 0.00 3.18
3174 3686 3.095738 GTCGTTTTGTTCAAGTTCACCG 58.904 45.455 0.00 0.00 0.00 4.94
3181 3693 2.285977 GTTCAAGTTCACCGTGACCTT 58.714 47.619 5.54 5.54 28.64 3.50
3185 3697 4.515361 TCAAGTTCACCGTGACCTTTTAA 58.485 39.130 8.50 0.00 25.84 1.52
3186 3698 5.127491 TCAAGTTCACCGTGACCTTTTAAT 58.873 37.500 8.50 0.00 25.84 1.40
3191 3703 8.488651 AGTTCACCGTGACCTTTTAATATAAG 57.511 34.615 0.00 0.00 0.00 1.73
3192 3704 7.551617 AGTTCACCGTGACCTTTTAATATAAGG 59.448 37.037 0.00 7.77 46.17 2.69
3207 3719 9.683870 TTTAATATAAGGTGTATTGGTTTCCGT 57.316 29.630 0.00 0.00 0.00 4.69
3208 3720 7.562454 AATATAAGGTGTATTGGTTTCCGTG 57.438 36.000 0.00 0.00 0.00 4.94
3209 3721 1.530323 AGGTGTATTGGTTTCCGTGC 58.470 50.000 0.00 0.00 0.00 5.34
3210 3722 1.202830 AGGTGTATTGGTTTCCGTGCA 60.203 47.619 0.00 0.00 0.00 4.57
3211 3723 1.609555 GGTGTATTGGTTTCCGTGCAA 59.390 47.619 0.00 0.00 0.00 4.08
3212 3724 2.351350 GGTGTATTGGTTTCCGTGCAAG 60.351 50.000 0.00 0.00 0.00 4.01
3213 3725 2.292292 GTGTATTGGTTTCCGTGCAAGT 59.708 45.455 0.00 0.00 0.00 3.16
3214 3726 2.550606 TGTATTGGTTTCCGTGCAAGTC 59.449 45.455 0.00 0.00 0.00 3.01
3215 3727 1.686355 ATTGGTTTCCGTGCAAGTCA 58.314 45.000 0.00 0.00 0.00 3.41
3216 3728 1.464734 TTGGTTTCCGTGCAAGTCAA 58.535 45.000 0.00 0.00 0.00 3.18
3217 3729 1.464734 TGGTTTCCGTGCAAGTCAAA 58.535 45.000 0.00 0.00 0.00 2.69
3218 3730 2.028130 TGGTTTCCGTGCAAGTCAAAT 58.972 42.857 0.00 0.00 0.00 2.32
3219 3731 3.215151 TGGTTTCCGTGCAAGTCAAATA 58.785 40.909 0.00 0.00 0.00 1.40
3220 3732 3.823873 TGGTTTCCGTGCAAGTCAAATAT 59.176 39.130 0.00 0.00 0.00 1.28
3221 3733 4.279671 TGGTTTCCGTGCAAGTCAAATATT 59.720 37.500 0.00 0.00 0.00 1.28
3222 3734 5.221342 TGGTTTCCGTGCAAGTCAAATATTT 60.221 36.000 0.00 0.00 0.00 1.40
3223 3735 5.118510 GGTTTCCGTGCAAGTCAAATATTTG 59.881 40.000 20.13 20.13 39.48 2.32
3224 3736 5.697473 TTCCGTGCAAGTCAAATATTTGA 57.303 34.783 23.86 23.86 44.31 2.69
3314 3826 8.812513 ACTACTTTTCATGATGGATCAAATCA 57.187 30.769 11.48 11.48 40.69 2.57
3315 3827 9.417561 ACTACTTTTCATGATGGATCAAATCAT 57.582 29.630 14.34 14.34 43.88 2.45
3350 3862 9.767684 TGTGTCGTGAATGTTGATATATTTTTC 57.232 29.630 0.00 0.00 0.00 2.29
3351 3863 9.988350 GTGTCGTGAATGTTGATATATTTTTCT 57.012 29.630 0.00 0.00 0.00 2.52
3370 3882 8.455598 TTTTTCTAAAAACTCGGTCAAACTTG 57.544 30.769 0.00 0.00 33.29 3.16
3371 3883 5.164606 TCTAAAAACTCGGTCAAACTTGC 57.835 39.130 0.00 0.00 0.00 4.01
3372 3884 3.859411 AAAAACTCGGTCAAACTTGCA 57.141 38.095 0.00 0.00 0.00 4.08
3373 3885 2.844122 AAACTCGGTCAAACTTGCAC 57.156 45.000 0.00 0.00 0.00 4.57
3374 3886 2.038387 AACTCGGTCAAACTTGCACT 57.962 45.000 0.00 0.00 0.00 4.40
3375 3887 1.583054 ACTCGGTCAAACTTGCACTC 58.417 50.000 0.00 0.00 0.00 3.51
3376 3888 1.134521 ACTCGGTCAAACTTGCACTCA 60.135 47.619 0.00 0.00 0.00 3.41
3377 3889 2.146342 CTCGGTCAAACTTGCACTCAT 58.854 47.619 0.00 0.00 0.00 2.90
3378 3890 2.549754 CTCGGTCAAACTTGCACTCATT 59.450 45.455 0.00 0.00 0.00 2.57
3379 3891 2.948979 TCGGTCAAACTTGCACTCATTT 59.051 40.909 0.00 0.00 0.00 2.32
3380 3892 3.044986 CGGTCAAACTTGCACTCATTTG 58.955 45.455 0.00 0.00 34.11 2.32
3381 3893 3.243035 CGGTCAAACTTGCACTCATTTGA 60.243 43.478 8.87 8.87 38.42 2.69
3384 3896 5.581126 TCAAACTTGCACTCATTTGACTT 57.419 34.783 8.87 0.00 36.42 3.01
3385 3897 5.964758 TCAAACTTGCACTCATTTGACTTT 58.035 33.333 8.87 0.00 36.42 2.66
3386 3898 6.397272 TCAAACTTGCACTCATTTGACTTTT 58.603 32.000 8.87 0.00 36.42 2.27
3387 3899 6.531240 TCAAACTTGCACTCATTTGACTTTTC 59.469 34.615 8.87 0.00 36.42 2.29
3388 3900 5.581126 ACTTGCACTCATTTGACTTTTCA 57.419 34.783 0.00 0.00 0.00 2.69
3389 3901 5.964758 ACTTGCACTCATTTGACTTTTCAA 58.035 33.333 0.00 0.00 40.14 2.69
3419 3931 9.333724 ACAAATACACCTTATATAAAGGAACGG 57.666 33.333 10.67 6.38 39.81 4.44
3420 3932 9.550406 CAAATACACCTTATATAAAGGAACGGA 57.450 33.333 10.67 0.00 39.81 4.69
3421 3933 9.774413 AAATACACCTTATATAAAGGAACGGAG 57.226 33.333 10.67 5.47 39.81 4.63
3422 3934 6.170846 ACACCTTATATAAAGGAACGGAGG 57.829 41.667 10.67 4.52 39.81 4.30
3423 3935 5.071384 ACACCTTATATAAAGGAACGGAGGG 59.929 44.000 10.67 4.11 39.81 4.30
3424 3936 5.306160 CACCTTATATAAAGGAACGGAGGGA 59.694 44.000 10.67 0.00 39.81 4.20
3425 3937 5.543020 ACCTTATATAAAGGAACGGAGGGAG 59.457 44.000 10.67 0.00 39.81 4.30
3426 3938 5.543020 CCTTATATAAAGGAACGGAGGGAGT 59.457 44.000 0.00 0.00 39.81 3.85
3427 3939 6.723052 CCTTATATAAAGGAACGGAGGGAGTA 59.277 42.308 0.00 0.00 39.81 2.59
3428 3940 7.399478 CCTTATATAAAGGAACGGAGGGAGTAT 59.601 40.741 0.00 0.00 39.81 2.12
3429 3941 8.731591 TTATATAAAGGAACGGAGGGAGTATT 57.268 34.615 0.00 0.00 0.00 1.89
3430 3942 5.970501 ATAAAGGAACGGAGGGAGTATTT 57.029 39.130 0.00 0.00 0.00 1.40
3431 3943 4.652679 AAAGGAACGGAGGGAGTATTTT 57.347 40.909 0.00 0.00 0.00 1.82
3432 3944 3.908643 AGGAACGGAGGGAGTATTTTC 57.091 47.619 0.00 0.00 0.00 2.29
3433 3945 3.451890 AGGAACGGAGGGAGTATTTTCT 58.548 45.455 0.00 0.00 0.00 2.52
3434 3946 4.617593 AGGAACGGAGGGAGTATTTTCTA 58.382 43.478 0.00 0.00 0.00 2.10
3435 3947 5.028131 AGGAACGGAGGGAGTATTTTCTAA 58.972 41.667 0.00 0.00 0.00 2.10
3436 3948 5.666265 AGGAACGGAGGGAGTATTTTCTAAT 59.334 40.000 0.00 0.00 0.00 1.73
3437 3949 5.758784 GGAACGGAGGGAGTATTTTCTAATG 59.241 44.000 0.00 0.00 0.00 1.90
3438 3950 5.952347 ACGGAGGGAGTATTTTCTAATGT 57.048 39.130 0.00 0.00 0.00 2.71
3439 3951 6.309389 ACGGAGGGAGTATTTTCTAATGTT 57.691 37.500 0.00 0.00 0.00 2.71
3440 3952 6.718294 ACGGAGGGAGTATTTTCTAATGTTT 58.282 36.000 0.00 0.00 0.00 2.83
3441 3953 7.173032 ACGGAGGGAGTATTTTCTAATGTTTT 58.827 34.615 0.00 0.00 0.00 2.43
3442 3954 7.668469 ACGGAGGGAGTATTTTCTAATGTTTTT 59.332 33.333 0.00 0.00 0.00 1.94
3462 3974 6.453926 TTTTTCACTAGGTTTTAGCGGTTT 57.546 33.333 0.00 0.00 0.00 3.27
3463 3975 6.453926 TTTTCACTAGGTTTTAGCGGTTTT 57.546 33.333 0.00 0.00 0.00 2.43
3464 3976 6.453926 TTTCACTAGGTTTTAGCGGTTTTT 57.546 33.333 0.00 0.00 0.00 1.94
3491 4003 9.745018 TGTTTTTCATTTTATCCATCTCTCTCT 57.255 29.630 0.00 0.00 0.00 3.10
3504 4016 8.372877 TCCATCTCTCTCTTATTTTCTTGTCT 57.627 34.615 0.00 0.00 0.00 3.41
3505 4017 8.820831 TCCATCTCTCTCTTATTTTCTTGTCTT 58.179 33.333 0.00 0.00 0.00 3.01
3506 4018 9.447157 CCATCTCTCTCTTATTTTCTTGTCTTT 57.553 33.333 0.00 0.00 0.00 2.52
3551 4063 9.932207 ATATTTGAATTTCTGAGCAATGTTTCA 57.068 25.926 0.00 0.00 0.00 2.69
3552 4064 7.703298 TTTGAATTTCTGAGCAATGTTTCAG 57.297 32.000 9.55 9.55 41.67 3.02
3553 4065 6.638096 TGAATTTCTGAGCAATGTTTCAGA 57.362 33.333 13.03 13.03 45.89 3.27
3554 4066 7.223260 TGAATTTCTGAGCAATGTTTCAGAT 57.777 32.000 16.20 6.05 46.54 2.90
3555 4067 7.663827 TGAATTTCTGAGCAATGTTTCAGATT 58.336 30.769 16.20 10.83 46.54 2.40
3556 4068 8.145767 TGAATTTCTGAGCAATGTTTCAGATTT 58.854 29.630 16.20 13.55 46.54 2.17
3557 4069 8.530269 AATTTCTGAGCAATGTTTCAGATTTC 57.470 30.769 16.20 0.00 46.54 2.17
3558 4070 6.638096 TTCTGAGCAATGTTTCAGATTTCA 57.362 33.333 16.20 3.80 46.54 2.69
3559 4071 6.250344 TCTGAGCAATGTTTCAGATTTCAG 57.750 37.500 13.03 0.00 43.51 3.02
3560 4072 5.999600 TCTGAGCAATGTTTCAGATTTCAGA 59.000 36.000 13.03 0.00 43.51 3.27
3561 4073 6.487668 TCTGAGCAATGTTTCAGATTTCAGAA 59.512 34.615 13.03 0.00 43.51 3.02
3562 4074 7.013559 TCTGAGCAATGTTTCAGATTTCAGAAA 59.986 33.333 13.03 0.00 43.51 2.52
3563 4075 7.490840 TGAGCAATGTTTCAGATTTCAGAAAA 58.509 30.769 0.00 0.00 34.04 2.29
3564 4076 7.980662 TGAGCAATGTTTCAGATTTCAGAAAAA 59.019 29.630 0.00 0.00 34.04 1.94
3587 4099 7.826260 AAATGTTCGTGTTTTCTGAAAATGT 57.174 28.000 17.63 0.00 32.22 2.71
3588 4100 7.826260 AATGTTCGTGTTTTCTGAAAATGTT 57.174 28.000 17.63 3.56 32.22 2.71
3589 4101 7.826260 ATGTTCGTGTTTTCTGAAAATGTTT 57.174 28.000 17.63 0.00 32.22 2.83
3590 4102 7.043454 TGTTCGTGTTTTCTGAAAATGTTTG 57.957 32.000 17.63 7.70 32.22 2.93
3591 4103 6.642950 TGTTCGTGTTTTCTGAAAATGTTTGT 59.357 30.769 17.63 0.00 32.22 2.83
3592 4104 7.808381 TGTTCGTGTTTTCTGAAAATGTTTGTA 59.192 29.630 17.63 2.46 32.22 2.41
3593 4105 8.803799 GTTCGTGTTTTCTGAAAATGTTTGTAT 58.196 29.630 17.63 0.00 32.22 2.29
3594 4106 8.918961 TCGTGTTTTCTGAAAATGTTTGTATT 57.081 26.923 17.63 0.00 32.22 1.89
3595 4107 9.360093 TCGTGTTTTCTGAAAATGTTTGTATTT 57.640 25.926 17.63 0.00 32.22 1.40
3596 4108 9.965748 CGTGTTTTCTGAAAATGTTTGTATTTT 57.034 25.926 17.63 0.00 41.55 1.82
3654 4166 9.103861 TGGAATTTAAGTTTTCACATGTTTTCC 57.896 29.630 0.00 0.00 0.00 3.13
3655 4167 9.103861 GGAATTTAAGTTTTCACATGTTTTCCA 57.896 29.630 0.00 0.00 0.00 3.53
3708 4220 9.565213 TTTTTGCAATTTTGAAGTAATGTTTGG 57.435 25.926 0.00 0.00 0.00 3.28
3709 4221 8.498054 TTTGCAATTTTGAAGTAATGTTTGGA 57.502 26.923 0.00 0.00 0.00 3.53
3710 4222 8.498054 TTGCAATTTTGAAGTAATGTTTGGAA 57.502 26.923 0.00 0.00 0.00 3.53
3711 4223 8.674263 TGCAATTTTGAAGTAATGTTTGGAAT 57.326 26.923 0.00 0.00 0.00 3.01
3712 4224 9.118300 TGCAATTTTGAAGTAATGTTTGGAATT 57.882 25.926 0.00 0.00 0.00 2.17
3713 4225 9.949174 GCAATTTTGAAGTAATGTTTGGAATTT 57.051 25.926 0.00 0.00 0.00 1.82
3727 4239 9.824534 ATGTTTGGAATTTCAAATTTTATTCGC 57.175 25.926 14.93 0.14 38.64 4.70
3728 4240 8.830580 TGTTTGGAATTTCAAATTTTATTCGCA 58.169 25.926 14.93 2.69 38.64 5.10
3729 4241 9.657121 GTTTGGAATTTCAAATTTTATTCGCAA 57.343 25.926 14.93 3.58 38.64 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 3.152341 CTCATCTGGTTCAAGCTTTGGT 58.848 45.455 0.00 0.00 0.00 3.67
77 78 0.988063 TCCAAATCCACGATGTCCCA 59.012 50.000 0.00 0.00 0.00 4.37
146 147 0.185416 TCATCCTCTCCCCCTACGAC 59.815 60.000 0.00 0.00 0.00 4.34
169 170 1.476110 CGTGGAACTTCAGGGGAAACA 60.476 52.381 0.00 0.00 31.35 2.83
221 222 1.418637 ACAGTCCGGTTTTTCTGCCTA 59.581 47.619 0.00 0.00 0.00 3.93
235 236 3.927142 CGAGGACAATCTTTACACAGTCC 59.073 47.826 0.00 0.00 44.43 3.85
257 259 1.468914 GATTGCAAGTTTCGTCCCCTC 59.531 52.381 4.94 0.00 0.00 4.30
278 280 1.227943 GGCATGGGATCTAGCGCAA 60.228 57.895 11.47 0.00 34.27 4.85
376 380 1.447317 AAAATATGCGCCGCCAGAGG 61.447 55.000 6.63 0.00 0.00 3.69
377 381 0.381801 AAAAATATGCGCCGCCAGAG 59.618 50.000 6.63 0.00 0.00 3.35
378 382 0.380378 GAAAAATATGCGCCGCCAGA 59.620 50.000 6.63 0.00 0.00 3.86
379 383 0.594796 GGAAAAATATGCGCCGCCAG 60.595 55.000 6.63 0.00 0.00 4.85
380 384 1.034838 AGGAAAAATATGCGCCGCCA 61.035 50.000 6.63 0.00 0.00 5.69
381 385 0.317854 GAGGAAAAATATGCGCCGCC 60.318 55.000 6.63 0.00 0.00 6.13
382 386 0.657368 CGAGGAAAAATATGCGCCGC 60.657 55.000 4.18 0.00 0.00 6.53
383 387 0.655733 ACGAGGAAAAATATGCGCCG 59.344 50.000 4.18 0.00 0.00 6.46
384 388 3.059800 GTCTACGAGGAAAAATATGCGCC 60.060 47.826 4.18 0.00 0.00 6.53
385 389 3.361724 CGTCTACGAGGAAAAATATGCGC 60.362 47.826 0.00 0.00 43.02 6.09
386 390 4.039703 TCGTCTACGAGGAAAAATATGCG 58.960 43.478 0.14 0.00 44.22 4.73
406 410 1.427592 GGAGGACCTAGACGACGTCG 61.428 65.000 34.58 34.58 46.33 5.12
407 411 0.107752 AGGAGGACCTAGACGACGTC 60.108 60.000 20.25 20.25 45.83 4.34
408 412 1.989620 AGGAGGACCTAGACGACGT 59.010 57.895 0.00 0.00 45.83 4.34
409 413 4.959399 AGGAGGACCTAGACGACG 57.041 61.111 0.00 0.00 45.83 5.12
433 437 3.432445 ATGATGGCAGAGCTGGGGC 62.432 63.158 0.00 0.00 39.06 5.80
434 438 1.228184 GATGATGGCAGAGCTGGGG 60.228 63.158 0.00 0.00 0.00 4.96
435 439 0.183014 AAGATGATGGCAGAGCTGGG 59.817 55.000 0.00 0.00 0.00 4.45
436 440 1.595466 GAAGATGATGGCAGAGCTGG 58.405 55.000 0.00 0.00 0.00 4.85
437 441 1.218763 CGAAGATGATGGCAGAGCTG 58.781 55.000 0.00 0.00 0.00 4.24
438 442 0.532417 GCGAAGATGATGGCAGAGCT 60.532 55.000 0.00 0.00 0.00 4.09
439 443 1.505477 GGCGAAGATGATGGCAGAGC 61.505 60.000 0.00 0.00 0.00 4.09
440 444 0.179065 TGGCGAAGATGATGGCAGAG 60.179 55.000 0.00 0.00 33.89 3.35
441 445 0.252761 TTGGCGAAGATGATGGCAGA 59.747 50.000 0.00 0.00 39.46 4.26
442 446 0.661552 CTTGGCGAAGATGATGGCAG 59.338 55.000 1.62 0.00 39.46 4.85
443 447 0.035152 ACTTGGCGAAGATGATGGCA 60.035 50.000 16.00 0.00 36.29 4.92
444 448 0.659957 GACTTGGCGAAGATGATGGC 59.340 55.000 16.00 0.00 32.98 4.40
445 449 0.933097 CGACTTGGCGAAGATGATGG 59.067 55.000 16.00 0.00 32.98 3.51
446 450 0.302890 GCGACTTGGCGAAGATGATG 59.697 55.000 16.00 1.30 32.98 3.07
447 451 0.108186 TGCGACTTGGCGAAGATGAT 60.108 50.000 16.00 0.00 35.06 2.45
448 452 0.320334 TTGCGACTTGGCGAAGATGA 60.320 50.000 16.00 0.00 35.06 2.92
449 453 0.095935 CTTGCGACTTGGCGAAGATG 59.904 55.000 16.00 7.79 35.06 2.90
450 454 0.320771 ACTTGCGACTTGGCGAAGAT 60.321 50.000 16.00 0.00 35.06 2.40
451 455 1.069090 ACTTGCGACTTGGCGAAGA 59.931 52.632 16.00 0.00 35.06 2.87
452 456 1.205064 CACTTGCGACTTGGCGAAG 59.795 57.895 6.95 6.95 35.06 3.79
453 457 2.250939 CCACTTGCGACTTGGCGAA 61.251 57.895 0.00 0.00 35.06 4.70
454 458 2.664851 CCACTTGCGACTTGGCGA 60.665 61.111 0.00 0.00 35.06 5.54
455 459 2.664851 TCCACTTGCGACTTGGCG 60.665 61.111 0.00 0.00 35.06 5.69
456 460 1.166531 AACTCCACTTGCGACTTGGC 61.167 55.000 0.00 0.00 0.00 4.52
457 461 1.002468 CAAACTCCACTTGCGACTTGG 60.002 52.381 0.00 0.00 0.00 3.61
458 462 1.939934 TCAAACTCCACTTGCGACTTG 59.060 47.619 0.00 0.00 0.00 3.16
459 463 2.325583 TCAAACTCCACTTGCGACTT 57.674 45.000 0.00 0.00 0.00 3.01
460 464 2.417719 GATCAAACTCCACTTGCGACT 58.582 47.619 0.00 0.00 0.00 4.18
461 465 1.464997 GGATCAAACTCCACTTGCGAC 59.535 52.381 0.00 0.00 35.24 5.19
462 466 1.808411 GGATCAAACTCCACTTGCGA 58.192 50.000 0.00 0.00 35.24 5.10
463 467 0.443869 CGGATCAAACTCCACTTGCG 59.556 55.000 0.00 0.00 34.78 4.85
464 468 0.804989 CCGGATCAAACTCCACTTGC 59.195 55.000 0.00 0.00 34.78 4.01
465 469 2.076863 GTCCGGATCAAACTCCACTTG 58.923 52.381 7.81 0.00 34.78 3.16
466 470 1.337823 CGTCCGGATCAAACTCCACTT 60.338 52.381 7.81 0.00 34.78 3.16
467 471 0.246635 CGTCCGGATCAAACTCCACT 59.753 55.000 7.81 0.00 34.78 4.00
468 472 1.359459 GCGTCCGGATCAAACTCCAC 61.359 60.000 7.81 0.00 34.78 4.02
469 473 1.079405 GCGTCCGGATCAAACTCCA 60.079 57.895 7.81 0.00 34.78 3.86
470 474 1.814169 GGCGTCCGGATCAAACTCC 60.814 63.158 7.81 0.00 0.00 3.85
471 475 0.806492 GAGGCGTCCGGATCAAACTC 60.806 60.000 7.81 8.10 0.00 3.01
472 476 1.218316 GAGGCGTCCGGATCAAACT 59.782 57.895 7.81 1.66 0.00 2.66
473 477 1.814169 GGAGGCGTCCGGATCAAAC 60.814 63.158 7.81 0.00 31.37 2.93
474 478 2.582436 GGAGGCGTCCGGATCAAA 59.418 61.111 7.81 0.00 31.37 2.69
492 496 4.851179 GGTTGGATCGGGGGCGTC 62.851 72.222 0.00 0.00 0.00 5.19
495 499 3.728373 AGTGGTTGGATCGGGGGC 61.728 66.667 0.00 0.00 0.00 5.80
496 500 2.272146 CAGTGGTTGGATCGGGGG 59.728 66.667 0.00 0.00 0.00 5.40
497 501 2.438434 GCAGTGGTTGGATCGGGG 60.438 66.667 0.00 0.00 0.00 5.73
498 502 2.438434 GGCAGTGGTTGGATCGGG 60.438 66.667 0.00 0.00 0.00 5.14
499 503 1.077501 ATGGCAGTGGTTGGATCGG 60.078 57.895 0.00 0.00 0.00 4.18
500 504 1.431488 CGATGGCAGTGGTTGGATCG 61.431 60.000 0.00 0.00 0.00 3.69
501 505 1.718757 GCGATGGCAGTGGTTGGATC 61.719 60.000 0.00 0.00 39.62 3.36
502 506 1.750399 GCGATGGCAGTGGTTGGAT 60.750 57.895 0.00 0.00 39.62 3.41
503 507 1.549243 TAGCGATGGCAGTGGTTGGA 61.549 55.000 1.50 0.00 43.41 3.53
504 508 1.078497 TAGCGATGGCAGTGGTTGG 60.078 57.895 1.50 0.00 43.41 3.77
505 509 1.369091 GGTAGCGATGGCAGTGGTTG 61.369 60.000 1.50 0.00 43.41 3.77
506 510 1.078426 GGTAGCGATGGCAGTGGTT 60.078 57.895 1.50 0.00 43.41 3.67
507 511 1.990060 AGGTAGCGATGGCAGTGGT 60.990 57.895 1.50 0.00 43.41 4.16
508 512 1.522355 CAGGTAGCGATGGCAGTGG 60.522 63.158 1.50 0.00 43.41 4.00
509 513 0.108186 TTCAGGTAGCGATGGCAGTG 60.108 55.000 1.50 0.00 43.41 3.66
510 514 0.108138 GTTCAGGTAGCGATGGCAGT 60.108 55.000 1.50 0.00 43.41 4.40
511 515 0.811616 GGTTCAGGTAGCGATGGCAG 60.812 60.000 1.50 0.00 43.41 4.85
512 516 1.220749 GGTTCAGGTAGCGATGGCA 59.779 57.895 1.50 0.00 43.41 4.92
513 517 1.523938 GGGTTCAGGTAGCGATGGC 60.524 63.158 0.00 0.00 40.37 4.40
514 518 1.410004 TAGGGTTCAGGTAGCGATGG 58.590 55.000 0.00 0.00 0.00 3.51
515 519 2.483188 GGTTAGGGTTCAGGTAGCGATG 60.483 54.545 0.00 0.00 0.00 3.84
516 520 1.761198 GGTTAGGGTTCAGGTAGCGAT 59.239 52.381 0.00 0.00 0.00 4.58
517 521 1.188863 GGTTAGGGTTCAGGTAGCGA 58.811 55.000 0.00 0.00 0.00 4.93
518 522 0.177373 GGGTTAGGGTTCAGGTAGCG 59.823 60.000 0.00 0.00 0.00 4.26
519 523 0.177373 CGGGTTAGGGTTCAGGTAGC 59.823 60.000 0.00 0.00 0.00 3.58
520 524 1.479730 GTCGGGTTAGGGTTCAGGTAG 59.520 57.143 0.00 0.00 0.00 3.18
521 525 1.560505 GTCGGGTTAGGGTTCAGGTA 58.439 55.000 0.00 0.00 0.00 3.08
522 526 1.538687 CGTCGGGTTAGGGTTCAGGT 61.539 60.000 0.00 0.00 0.00 4.00
523 527 1.217244 CGTCGGGTTAGGGTTCAGG 59.783 63.158 0.00 0.00 0.00 3.86
524 528 1.133790 CTACGTCGGGTTAGGGTTCAG 59.866 57.143 0.00 0.00 0.00 3.02
525 529 1.176527 CTACGTCGGGTTAGGGTTCA 58.823 55.000 0.00 0.00 0.00 3.18
526 530 1.463674 TCTACGTCGGGTTAGGGTTC 58.536 55.000 0.00 0.00 0.00 3.62
527 531 2.027385 GATCTACGTCGGGTTAGGGTT 58.973 52.381 0.00 0.00 0.00 4.11
528 532 1.064463 TGATCTACGTCGGGTTAGGGT 60.064 52.381 0.00 0.00 0.00 4.34
529 533 1.683943 TGATCTACGTCGGGTTAGGG 58.316 55.000 0.00 0.00 0.00 3.53
530 534 3.608707 CGATTGATCTACGTCGGGTTAGG 60.609 52.174 0.00 0.00 0.00 2.69
531 535 3.552541 CGATTGATCTACGTCGGGTTAG 58.447 50.000 0.00 0.00 0.00 2.34
532 536 3.614159 CGATTGATCTACGTCGGGTTA 57.386 47.619 0.00 0.00 0.00 2.85
533 537 2.486951 CGATTGATCTACGTCGGGTT 57.513 50.000 0.00 0.00 0.00 4.11
537 541 1.065102 ACACCCGATTGATCTACGTCG 59.935 52.381 0.00 0.00 0.00 5.12
538 542 2.858344 CAACACCCGATTGATCTACGTC 59.142 50.000 0.00 0.00 0.00 4.34
539 543 2.888594 CAACACCCGATTGATCTACGT 58.111 47.619 0.00 0.00 0.00 3.57
540 544 1.593006 GCAACACCCGATTGATCTACG 59.407 52.381 0.00 0.00 0.00 3.51
541 545 2.609459 CTGCAACACCCGATTGATCTAC 59.391 50.000 0.00 0.00 0.00 2.59
542 546 2.499693 TCTGCAACACCCGATTGATCTA 59.500 45.455 0.00 0.00 0.00 1.98
543 547 1.278985 TCTGCAACACCCGATTGATCT 59.721 47.619 0.00 0.00 0.00 2.75
544 548 1.737838 TCTGCAACACCCGATTGATC 58.262 50.000 0.00 0.00 0.00 2.92
545 549 2.198827 TTCTGCAACACCCGATTGAT 57.801 45.000 0.00 0.00 0.00 2.57
546 550 1.606668 GTTTCTGCAACACCCGATTGA 59.393 47.619 0.00 0.00 35.18 2.57
547 551 1.335872 GGTTTCTGCAACACCCGATTG 60.336 52.381 0.00 0.00 37.07 2.67
548 552 0.958822 GGTTTCTGCAACACCCGATT 59.041 50.000 0.00 0.00 37.07 3.34
549 553 0.893727 GGGTTTCTGCAACACCCGAT 60.894 55.000 11.04 0.00 41.00 4.18
550 554 1.527380 GGGTTTCTGCAACACCCGA 60.527 57.895 11.04 0.00 41.00 5.14
551 555 3.039134 GGGTTTCTGCAACACCCG 58.961 61.111 11.04 0.00 41.00 5.28
553 557 2.552743 GAGTTAGGGTTTCTGCAACACC 59.447 50.000 0.72 0.72 40.05 4.16
554 558 2.552743 GGAGTTAGGGTTTCTGCAACAC 59.447 50.000 0.00 0.00 39.39 3.32
555 559 2.488347 GGGAGTTAGGGTTTCTGCAACA 60.488 50.000 0.00 0.00 37.07 3.33
556 560 2.160205 GGGAGTTAGGGTTTCTGCAAC 58.840 52.381 0.00 0.00 34.18 4.17
557 561 1.271163 CGGGAGTTAGGGTTTCTGCAA 60.271 52.381 0.00 0.00 0.00 4.08
558 562 0.323629 CGGGAGTTAGGGTTTCTGCA 59.676 55.000 0.00 0.00 0.00 4.41
559 563 0.323957 ACGGGAGTTAGGGTTTCTGC 59.676 55.000 0.00 0.00 43.33 4.26
572 576 3.522731 CCTGGAGCGAGACGGGAG 61.523 72.222 0.00 0.00 35.02 4.30
575 579 2.356818 GATTCCCTGGAGCGAGACGG 62.357 65.000 0.00 0.00 0.00 4.79
576 580 1.066587 GATTCCCTGGAGCGAGACG 59.933 63.158 0.00 0.00 0.00 4.18
577 581 1.066587 CGATTCCCTGGAGCGAGAC 59.933 63.158 0.00 0.00 0.00 3.36
578 582 0.468214 ATCGATTCCCTGGAGCGAGA 60.468 55.000 15.23 3.39 36.66 4.04
579 583 0.038709 GATCGATTCCCTGGAGCGAG 60.039 60.000 15.23 0.00 36.66 5.03
580 584 0.755327 TGATCGATTCCCTGGAGCGA 60.755 55.000 13.24 13.24 37.25 4.93
581 585 0.104855 TTGATCGATTCCCTGGAGCG 59.895 55.000 0.00 4.70 0.00 5.03
582 586 1.542108 CCTTGATCGATTCCCTGGAGC 60.542 57.143 0.00 0.00 0.00 4.70
583 587 1.542108 GCCTTGATCGATTCCCTGGAG 60.542 57.143 0.00 0.00 0.00 3.86
584 588 0.469917 GCCTTGATCGATTCCCTGGA 59.530 55.000 0.00 0.00 0.00 3.86
585 589 0.536006 GGCCTTGATCGATTCCCTGG 60.536 60.000 0.00 0.00 0.00 4.45
586 590 0.882042 CGGCCTTGATCGATTCCCTG 60.882 60.000 0.00 0.00 0.00 4.45
587 591 1.447643 CGGCCTTGATCGATTCCCT 59.552 57.895 0.00 0.00 0.00 4.20
588 592 1.598130 CCGGCCTTGATCGATTCCC 60.598 63.158 0.00 0.00 0.00 3.97
589 593 1.598130 CCCGGCCTTGATCGATTCC 60.598 63.158 0.00 0.00 0.00 3.01
590 594 2.254464 GCCCGGCCTTGATCGATTC 61.254 63.158 0.00 0.00 0.00 2.52
591 595 2.203209 GCCCGGCCTTGATCGATT 60.203 61.111 0.00 0.00 0.00 3.34
592 596 4.609018 CGCCCGGCCTTGATCGAT 62.609 66.667 3.10 0.00 0.00 3.59
604 608 3.521529 GATCCTGGATCACCGCCCG 62.522 68.421 27.72 0.00 38.77 6.13
605 609 2.427753 GATCCTGGATCACCGCCC 59.572 66.667 27.72 2.87 38.77 6.13
606 610 2.029666 CGATCCTGGATCACCGCC 59.970 66.667 30.46 8.79 38.84 6.13
607 611 2.663188 GCGATCCTGGATCACCGC 60.663 66.667 30.46 25.49 38.84 5.68
608 612 2.029666 GGCGATCCTGGATCACCG 59.970 66.667 30.46 20.84 38.84 4.94
609 613 2.427753 GGGCGATCCTGGATCACC 59.572 66.667 28.14 28.14 39.68 4.02
610 614 2.427753 GGGGCGATCCTGGATCAC 59.572 66.667 30.46 23.13 38.84 3.06
611 615 3.233980 CGGGGCGATCCTGGATCA 61.234 66.667 30.46 0.00 38.84 2.92
612 616 3.234730 ACGGGGCGATCCTGGATC 61.235 66.667 23.93 23.93 46.36 3.36
613 617 3.550431 CACGGGGCGATCCTGGAT 61.550 66.667 9.42 9.42 46.36 3.41
614 618 4.770362 TCACGGGGCGATCCTGGA 62.770 66.667 0.00 0.00 46.36 3.86
615 619 3.521529 GATCACGGGGCGATCCTGG 62.522 68.421 8.59 0.00 46.36 4.45
617 621 2.443952 TGATCACGGGGCGATCCT 60.444 61.111 0.00 0.00 38.83 3.24
618 622 2.029666 CTGATCACGGGGCGATCC 59.970 66.667 0.00 0.00 38.83 3.36
619 623 2.663188 GCTGATCACGGGGCGATC 60.663 66.667 0.00 0.00 39.82 3.69
620 624 3.157217 GAGCTGATCACGGGGCGAT 62.157 63.158 0.00 0.00 0.00 4.58
621 625 3.838271 GAGCTGATCACGGGGCGA 61.838 66.667 0.00 0.00 0.00 5.54
623 627 2.650813 ATTCGAGCTGATCACGGGGC 62.651 60.000 0.00 0.76 0.00 5.80
624 628 0.598680 GATTCGAGCTGATCACGGGG 60.599 60.000 0.00 0.00 0.00 5.73
625 629 0.387202 AGATTCGAGCTGATCACGGG 59.613 55.000 0.00 0.00 0.00 5.28
626 630 3.497118 GATAGATTCGAGCTGATCACGG 58.503 50.000 0.00 0.00 0.00 4.94
627 631 3.497118 GGATAGATTCGAGCTGATCACG 58.503 50.000 0.00 0.00 0.00 4.35
628 632 3.256879 TGGGATAGATTCGAGCTGATCAC 59.743 47.826 0.00 0.00 0.00 3.06
629 633 3.500343 TGGGATAGATTCGAGCTGATCA 58.500 45.455 0.00 0.00 0.00 2.92
630 634 3.509575 ACTGGGATAGATTCGAGCTGATC 59.490 47.826 0.00 0.00 0.00 2.92
631 635 3.505386 ACTGGGATAGATTCGAGCTGAT 58.495 45.455 0.00 0.00 0.00 2.90
632 636 2.950781 ACTGGGATAGATTCGAGCTGA 58.049 47.619 0.00 0.00 0.00 4.26
633 637 3.742433 AACTGGGATAGATTCGAGCTG 57.258 47.619 0.00 0.00 0.00 4.24
634 638 3.706594 TCAAACTGGGATAGATTCGAGCT 59.293 43.478 0.00 0.00 0.00 4.09
635 639 4.060038 TCAAACTGGGATAGATTCGAGC 57.940 45.455 0.00 0.00 0.00 5.03
636 640 4.920340 CGATCAAACTGGGATAGATTCGAG 59.080 45.833 0.00 0.00 0.00 4.04
637 641 4.262036 CCGATCAAACTGGGATAGATTCGA 60.262 45.833 0.00 0.00 0.00 3.71
638 642 3.990469 CCGATCAAACTGGGATAGATTCG 59.010 47.826 0.00 0.00 0.00 3.34
639 643 4.319177 CCCGATCAAACTGGGATAGATTC 58.681 47.826 0.00 0.00 46.41 2.52
640 644 3.073062 CCCCGATCAAACTGGGATAGATT 59.927 47.826 4.30 0.00 46.41 2.40
641 645 2.639839 CCCCGATCAAACTGGGATAGAT 59.360 50.000 4.30 0.00 46.41 1.98
642 646 2.047061 CCCCGATCAAACTGGGATAGA 58.953 52.381 4.30 0.00 46.41 1.98
643 647 1.072331 CCCCCGATCAAACTGGGATAG 59.928 57.143 4.30 0.00 46.41 2.08
644 648 1.136828 CCCCCGATCAAACTGGGATA 58.863 55.000 4.30 0.00 46.41 2.59
645 649 0.623324 TCCCCCGATCAAACTGGGAT 60.623 55.000 4.30 0.00 46.41 3.85
646 650 1.229690 TCCCCCGATCAAACTGGGA 60.230 57.895 4.30 2.89 46.41 4.37
647 651 1.224592 CTCCCCCGATCAAACTGGG 59.775 63.158 0.00 0.00 42.92 4.45
648 652 1.224592 CCTCCCCCGATCAAACTGG 59.775 63.158 0.00 0.00 0.00 4.00
649 653 0.618458 TTCCTCCCCCGATCAAACTG 59.382 55.000 0.00 0.00 0.00 3.16
650 654 0.912486 CTTCCTCCCCCGATCAAACT 59.088 55.000 0.00 0.00 0.00 2.66
651 655 0.107165 CCTTCCTCCCCCGATCAAAC 60.107 60.000 0.00 0.00 0.00 2.93
652 656 0.252974 TCCTTCCTCCCCCGATCAAA 60.253 55.000 0.00 0.00 0.00 2.69
653 657 0.981277 GTCCTTCCTCCCCCGATCAA 60.981 60.000 0.00 0.00 0.00 2.57
654 658 1.382695 GTCCTTCCTCCCCCGATCA 60.383 63.158 0.00 0.00 0.00 2.92
655 659 1.382695 TGTCCTTCCTCCCCCGATC 60.383 63.158 0.00 0.00 0.00 3.69
656 660 1.689582 GTGTCCTTCCTCCCCCGAT 60.690 63.158 0.00 0.00 0.00 4.18
657 661 2.284405 GTGTCCTTCCTCCCCCGA 60.284 66.667 0.00 0.00 0.00 5.14
658 662 3.771160 CGTGTCCTTCCTCCCCCG 61.771 72.222 0.00 0.00 0.00 5.73
659 663 3.400054 CCGTGTCCTTCCTCCCCC 61.400 72.222 0.00 0.00 0.00 5.40
660 664 2.606826 ACCGTGTCCTTCCTCCCC 60.607 66.667 0.00 0.00 0.00 4.81
661 665 1.605971 GAGACCGTGTCCTTCCTCCC 61.606 65.000 1.06 0.00 32.18 4.30
662 666 1.891616 GAGACCGTGTCCTTCCTCC 59.108 63.158 1.06 0.00 32.18 4.30
663 667 0.959372 TCGAGACCGTGTCCTTCCTC 60.959 60.000 1.06 0.00 37.05 3.71
664 668 1.074423 TCGAGACCGTGTCCTTCCT 59.926 57.895 1.06 0.00 37.05 3.36
665 669 1.212229 GTCGAGACCGTGTCCTTCC 59.788 63.158 0.00 0.00 37.05 3.46
666 670 1.154263 CGTCGAGACCGTGTCCTTC 60.154 63.158 0.00 0.00 37.05 3.46
667 671 2.623915 CCGTCGAGACCGTGTCCTT 61.624 63.158 0.00 0.00 37.05 3.36
668 672 3.054503 CCGTCGAGACCGTGTCCT 61.055 66.667 0.00 0.00 37.05 3.85
669 673 4.773117 GCCGTCGAGACCGTGTCC 62.773 72.222 0.00 0.00 37.05 4.02
677 681 3.844858 TTTTTCGCCGCCGTCGAGA 62.845 57.895 0.00 0.00 37.26 4.04
678 682 2.612335 GATTTTTCGCCGCCGTCGAG 62.612 60.000 0.00 0.00 37.26 4.04
679 683 2.732670 GATTTTTCGCCGCCGTCGA 61.733 57.895 0.00 0.00 38.10 4.20
680 684 2.276430 GATTTTTCGCCGCCGTCG 60.276 61.111 0.00 0.00 35.54 5.12
681 685 1.511254 GTGATTTTTCGCCGCCGTC 60.511 57.895 0.00 0.00 35.54 4.79
682 686 2.559330 GTGATTTTTCGCCGCCGT 59.441 55.556 0.00 0.00 35.54 5.68
683 687 2.202427 GGTGATTTTTCGCCGCCG 60.202 61.111 0.00 0.00 0.00 6.46
684 688 1.136774 GAGGTGATTTTTCGCCGCC 59.863 57.895 0.25 0.00 44.50 6.13
685 689 1.226018 CGAGGTGATTTTTCGCCGC 60.226 57.895 0.25 0.09 44.50 6.53
686 690 1.423845 CCGAGGTGATTTTTCGCCG 59.576 57.895 0.25 0.00 44.50 6.46
687 691 0.675522 TCCCGAGGTGATTTTTCGCC 60.676 55.000 0.00 0.00 40.41 5.54
688 692 0.727398 CTCCCGAGGTGATTTTTCGC 59.273 55.000 0.00 0.00 33.25 4.70
689 693 2.380084 TCTCCCGAGGTGATTTTTCG 57.620 50.000 0.00 0.00 0.00 3.46
690 694 2.420372 GCTTCTCCCGAGGTGATTTTTC 59.580 50.000 0.00 0.00 0.00 2.29
691 695 2.040412 AGCTTCTCCCGAGGTGATTTTT 59.960 45.455 0.00 0.00 0.00 1.94
692 696 1.630878 AGCTTCTCCCGAGGTGATTTT 59.369 47.619 0.00 0.00 0.00 1.82
693 697 1.280457 AGCTTCTCCCGAGGTGATTT 58.720 50.000 0.00 0.00 0.00 2.17
694 698 2.160721 TAGCTTCTCCCGAGGTGATT 57.839 50.000 0.00 0.00 0.00 2.57
695 699 2.160721 TTAGCTTCTCCCGAGGTGAT 57.839 50.000 0.00 0.00 0.00 3.06
696 700 1.933021 TTTAGCTTCTCCCGAGGTGA 58.067 50.000 0.00 0.00 0.00 4.02
697 701 2.347731 GTTTTAGCTTCTCCCGAGGTG 58.652 52.381 0.00 0.00 0.00 4.00
698 702 1.278413 GGTTTTAGCTTCTCCCGAGGT 59.722 52.381 0.00 0.00 0.00 3.85
699 703 1.407025 GGGTTTTAGCTTCTCCCGAGG 60.407 57.143 0.00 0.00 0.00 4.63
700 704 1.555533 AGGGTTTTAGCTTCTCCCGAG 59.444 52.381 0.00 0.00 42.57 4.63
701 705 1.652947 AGGGTTTTAGCTTCTCCCGA 58.347 50.000 0.00 0.00 42.57 5.14
702 706 2.742204 GCTAGGGTTTTAGCTTCTCCCG 60.742 54.545 0.00 0.00 42.18 5.14
703 707 2.742204 CGCTAGGGTTTTAGCTTCTCCC 60.742 54.545 0.00 0.00 43.05 4.30
704 708 2.167900 TCGCTAGGGTTTTAGCTTCTCC 59.832 50.000 6.70 0.00 43.05 3.71
705 709 3.130693 TCTCGCTAGGGTTTTAGCTTCTC 59.869 47.826 6.70 0.00 43.05 2.87
706 710 3.097614 TCTCGCTAGGGTTTTAGCTTCT 58.902 45.455 6.70 0.00 43.05 2.85
707 711 3.449632 CTCTCGCTAGGGTTTTAGCTTC 58.550 50.000 6.70 0.00 43.05 3.86
708 712 2.168728 CCTCTCGCTAGGGTTTTAGCTT 59.831 50.000 6.70 0.00 43.05 3.74
709 713 1.757699 CCTCTCGCTAGGGTTTTAGCT 59.242 52.381 6.70 0.00 43.05 3.32
710 714 2.226602 CCTCTCGCTAGGGTTTTAGC 57.773 55.000 6.70 0.00 42.05 3.09
718 722 0.755686 ATTGCTTCCCTCTCGCTAGG 59.244 55.000 0.00 0.00 36.30 3.02
719 723 3.951775 ATATTGCTTCCCTCTCGCTAG 57.048 47.619 0.00 0.00 0.00 3.42
720 724 4.408276 ACTATATTGCTTCCCTCTCGCTA 58.592 43.478 0.00 0.00 0.00 4.26
721 725 3.235200 ACTATATTGCTTCCCTCTCGCT 58.765 45.455 0.00 0.00 0.00 4.93
722 726 3.669251 ACTATATTGCTTCCCTCTCGC 57.331 47.619 0.00 0.00 0.00 5.03
723 727 4.561105 GGAACTATATTGCTTCCCTCTCG 58.439 47.826 7.03 0.00 0.00 4.04
724 728 4.900684 GGGAACTATATTGCTTCCCTCTC 58.099 47.826 20.00 4.76 46.88 3.20
725 729 4.984146 GGGAACTATATTGCTTCCCTCT 57.016 45.455 20.00 0.00 46.88 3.69
729 733 4.452455 CGACATGGGAACTATATTGCTTCC 59.548 45.833 0.00 8.77 33.85 3.46
730 734 5.050091 CACGACATGGGAACTATATTGCTTC 60.050 44.000 0.00 0.00 0.00 3.86
731 735 4.816385 CACGACATGGGAACTATATTGCTT 59.184 41.667 0.00 0.00 0.00 3.91
732 736 4.141711 ACACGACATGGGAACTATATTGCT 60.142 41.667 0.00 0.00 0.00 3.91
733 737 4.127171 ACACGACATGGGAACTATATTGC 58.873 43.478 0.00 0.00 0.00 3.56
734 738 6.368791 CCATACACGACATGGGAACTATATTG 59.631 42.308 0.00 0.00 39.49 1.90
735 739 6.042781 ACCATACACGACATGGGAACTATATT 59.957 38.462 15.60 0.00 46.14 1.28
736 740 5.542635 ACCATACACGACATGGGAACTATAT 59.457 40.000 15.60 0.00 46.14 0.86
737 741 4.897076 ACCATACACGACATGGGAACTATA 59.103 41.667 15.60 0.00 46.14 1.31
738 742 3.709653 ACCATACACGACATGGGAACTAT 59.290 43.478 15.60 0.00 46.14 2.12
739 743 3.101437 ACCATACACGACATGGGAACTA 58.899 45.455 15.60 0.00 46.14 2.24
740 744 1.906574 ACCATACACGACATGGGAACT 59.093 47.619 15.60 0.00 46.14 3.01
741 745 2.277084 GACCATACACGACATGGGAAC 58.723 52.381 15.60 6.43 46.14 3.62
742 746 1.134936 CGACCATACACGACATGGGAA 60.135 52.381 15.60 0.00 46.14 3.97
743 747 0.458260 CGACCATACACGACATGGGA 59.542 55.000 15.60 0.00 46.14 4.37
744 748 0.458260 TCGACCATACACGACATGGG 59.542 55.000 15.60 3.40 46.14 4.00
746 750 2.044135 CGATCGACCATACACGACATG 58.956 52.381 10.26 0.00 41.17 3.21
747 751 1.944709 TCGATCGACCATACACGACAT 59.055 47.619 15.15 0.00 41.17 3.06
748 752 1.371595 TCGATCGACCATACACGACA 58.628 50.000 15.15 0.00 41.17 4.35
749 753 2.572243 GATCGATCGACCATACACGAC 58.428 52.381 22.06 0.00 41.17 4.34
750 754 2.963498 GATCGATCGACCATACACGA 57.037 50.000 22.06 0.00 42.49 4.35
763 767 2.028476 AGACGAGGAGAGATCGATCGAT 60.028 50.000 29.76 29.76 42.76 3.59
764 768 1.341852 AGACGAGGAGAGATCGATCGA 59.658 52.381 21.86 21.86 42.76 3.59
765 769 1.724623 GAGACGAGGAGAGATCGATCG 59.275 57.143 19.33 9.36 42.76 3.69
766 770 2.993899 GAGAGACGAGGAGAGATCGATC 59.006 54.545 17.91 17.91 42.76 3.69
767 771 2.289444 GGAGAGACGAGGAGAGATCGAT 60.289 54.545 0.00 0.00 42.76 3.59
768 772 1.069513 GGAGAGACGAGGAGAGATCGA 59.930 57.143 1.94 0.00 42.76 3.59
769 773 1.508632 GGAGAGACGAGGAGAGATCG 58.491 60.000 0.00 0.00 45.54 3.69
770 774 1.202604 ACGGAGAGACGAGGAGAGATC 60.203 57.143 0.00 0.00 37.61 2.75
771 775 0.834612 ACGGAGAGACGAGGAGAGAT 59.165 55.000 0.00 0.00 37.61 2.75
772 776 0.614294 AACGGAGAGACGAGGAGAGA 59.386 55.000 0.00 0.00 37.61 3.10
773 777 0.730265 CAACGGAGAGACGAGGAGAG 59.270 60.000 0.00 0.00 37.61 3.20
774 778 0.036448 ACAACGGAGAGACGAGGAGA 59.964 55.000 0.00 0.00 37.61 3.71
775 779 0.882474 AACAACGGAGAGACGAGGAG 59.118 55.000 0.00 0.00 37.61 3.69
776 780 0.596577 CAACAACGGAGAGACGAGGA 59.403 55.000 0.00 0.00 37.61 3.71
777 781 1.009389 GCAACAACGGAGAGACGAGG 61.009 60.000 0.00 0.00 37.61 4.63
778 782 1.009389 GGCAACAACGGAGAGACGAG 61.009 60.000 0.00 0.00 37.61 4.18
779 783 1.006571 GGCAACAACGGAGAGACGA 60.007 57.895 0.00 0.00 37.61 4.20
780 784 0.600255 AAGGCAACAACGGAGAGACG 60.600 55.000 0.00 0.00 41.41 4.18
781 785 1.264288 CAAAGGCAACAACGGAGAGAC 59.736 52.381 0.00 0.00 41.41 3.36
782 786 1.134220 ACAAAGGCAACAACGGAGAGA 60.134 47.619 0.00 0.00 41.41 3.10
783 787 1.308998 ACAAAGGCAACAACGGAGAG 58.691 50.000 0.00 0.00 41.41 3.20
784 788 1.403679 CAACAAAGGCAACAACGGAGA 59.596 47.619 0.00 0.00 41.41 3.71
785 789 1.838913 CAACAAAGGCAACAACGGAG 58.161 50.000 0.00 0.00 41.41 4.63
786 790 0.179124 GCAACAAAGGCAACAACGGA 60.179 50.000 0.00 0.00 41.41 4.69
787 791 1.151172 GGCAACAAAGGCAACAACGG 61.151 55.000 0.00 0.00 41.41 4.44
788 792 0.179113 AGGCAACAAAGGCAACAACG 60.179 50.000 0.00 0.00 38.30 4.10
789 793 1.665169 CAAGGCAACAAAGGCAACAAC 59.335 47.619 0.00 0.00 38.30 3.32
790 794 1.277557 ACAAGGCAACAAAGGCAACAA 59.722 42.857 0.00 0.00 38.30 2.83
791 795 0.901124 ACAAGGCAACAAAGGCAACA 59.099 45.000 0.00 0.00 38.30 3.33
792 796 1.665169 CAACAAGGCAACAAAGGCAAC 59.335 47.619 0.00 0.00 41.41 4.17
793 797 1.406614 CCAACAAGGCAACAAAGGCAA 60.407 47.619 0.00 0.00 41.41 4.52
794 798 0.177604 CCAACAAGGCAACAAAGGCA 59.822 50.000 0.00 0.00 41.41 4.75
805 809 1.627864 CCAAACCTACCCCAACAAGG 58.372 55.000 0.00 0.00 36.42 3.61
815 819 0.879090 CGTTTCCAGCCCAAACCTAC 59.121 55.000 0.00 0.00 31.12 3.18
850 854 3.804193 GGGCTGCTTGCTGTACGC 61.804 66.667 0.00 3.22 42.39 4.42
883 887 1.380403 TACGGCGGGCATTCCATTTG 61.380 55.000 13.24 0.00 34.36 2.32
886 890 1.525995 CTTACGGCGGGCATTCCAT 60.526 57.895 13.24 0.00 34.36 3.41
887 891 2.124901 CTTACGGCGGGCATTCCA 60.125 61.111 13.24 0.00 34.36 3.53
889 893 1.887707 CCTCTTACGGCGGGCATTC 60.888 63.158 13.24 0.00 0.00 2.67
891 895 0.830444 TATCCTCTTACGGCGGGCAT 60.830 55.000 13.24 0.00 0.00 4.40
892 896 0.830444 ATATCCTCTTACGGCGGGCA 60.830 55.000 13.24 0.00 0.00 5.36
893 897 0.320697 AATATCCTCTTACGGCGGGC 59.679 55.000 13.24 0.00 0.00 6.13
894 898 1.343465 ACAATATCCTCTTACGGCGGG 59.657 52.381 13.24 1.57 0.00 6.13
895 899 2.404215 CACAATATCCTCTTACGGCGG 58.596 52.381 13.24 0.00 0.00 6.13
896 900 1.792949 GCACAATATCCTCTTACGGCG 59.207 52.381 4.80 4.80 0.00 6.46
897 901 2.143925 GGCACAATATCCTCTTACGGC 58.856 52.381 0.00 0.00 0.00 5.68
898 902 2.404215 CGGCACAATATCCTCTTACGG 58.596 52.381 0.00 0.00 0.00 4.02
899 903 1.792949 GCGGCACAATATCCTCTTACG 59.207 52.381 0.00 0.00 0.00 3.18
902 906 0.532862 CGGCGGCACAATATCCTCTT 60.533 55.000 10.53 0.00 0.00 2.85
903 907 1.069765 CGGCGGCACAATATCCTCT 59.930 57.895 10.53 0.00 0.00 3.69
904 908 0.032952 TACGGCGGCACAATATCCTC 59.967 55.000 13.24 0.00 0.00 3.71
905 909 0.466543 TTACGGCGGCACAATATCCT 59.533 50.000 13.24 0.00 0.00 3.24
906 910 0.865769 CTTACGGCGGCACAATATCC 59.134 55.000 13.24 0.00 0.00 2.59
907 911 0.865769 CCTTACGGCGGCACAATATC 59.134 55.000 13.24 0.00 0.00 1.63
908 912 0.534203 CCCTTACGGCGGCACAATAT 60.534 55.000 13.24 0.00 0.00 1.28
909 913 1.153329 CCCTTACGGCGGCACAATA 60.153 57.895 13.24 0.00 0.00 1.90
910 914 2.437716 CCCTTACGGCGGCACAAT 60.438 61.111 13.24 0.00 0.00 2.71
911 915 4.708386 CCCCTTACGGCGGCACAA 62.708 66.667 13.24 0.39 0.00 3.33
913 917 4.397832 TTCCCCTTACGGCGGCAC 62.398 66.667 13.24 0.00 0.00 5.01
950 1207 0.522626 TGCATTGATCTGTTGCGGTG 59.477 50.000 9.47 0.00 39.23 4.94
958 1215 3.239587 TGGTTGCATTGCATTGATCTG 57.760 42.857 12.95 0.00 38.76 2.90
971 1228 0.179004 AGTCAATCGGGTTGGTTGCA 60.179 50.000 0.38 0.00 38.39 4.08
972 1229 0.958822 AAGTCAATCGGGTTGGTTGC 59.041 50.000 0.38 0.00 38.39 4.17
973 1230 2.161609 GCTAAGTCAATCGGGTTGGTTG 59.838 50.000 0.38 0.00 38.39 3.77
974 1231 2.433436 GCTAAGTCAATCGGGTTGGTT 58.567 47.619 0.38 0.00 38.39 3.67
975 1232 1.339727 GGCTAAGTCAATCGGGTTGGT 60.340 52.381 0.38 0.00 38.39 3.67
981 1238 2.972625 TCTGTTGGCTAAGTCAATCGG 58.027 47.619 0.00 0.00 27.28 4.18
1099 1363 0.899720 AATCGGCAGACGGACCTAAA 59.100 50.000 0.00 0.00 44.45 1.85
1142 1406 3.917760 GGGCGGAGATGAGGTCGG 61.918 72.222 0.00 0.00 0.00 4.79
1242 1506 1.364171 GAGACGCATATCACGGCCT 59.636 57.895 0.00 0.00 40.23 5.19
1440 1715 2.768253 TGAATGGATGCACTTCGAGT 57.232 45.000 0.00 0.00 0.00 4.18
1443 1718 2.456989 GCAATGAATGGATGCACTTCG 58.543 47.619 0.00 0.00 39.81 3.79
1446 1721 1.855295 TGGCAATGAATGGATGCACT 58.145 45.000 0.00 0.00 41.80 4.40
1604 1888 4.147449 CACTGATCGGAGGCGGCA 62.147 66.667 13.08 0.00 0.00 5.69
1606 1890 2.202797 CACACTGATCGGAGGCGG 60.203 66.667 9.00 0.00 0.00 6.13
1685 2083 1.199852 GCACAACAAGGTTTCACGCG 61.200 55.000 3.53 3.53 0.00 6.01
1762 2160 1.638529 CTCCGCATCTCTAGGGGATT 58.361 55.000 0.00 0.00 45.56 3.01
1766 2164 1.414158 TTTCCTCCGCATCTCTAGGG 58.586 55.000 0.00 0.00 0.00 3.53
1769 2167 2.418746 GCTGTTTTCCTCCGCATCTCTA 60.419 50.000 0.00 0.00 0.00 2.43
1770 2168 1.677217 GCTGTTTTCCTCCGCATCTCT 60.677 52.381 0.00 0.00 0.00 3.10
1874 2272 4.403752 TGATCTTACCAGAGTCATCCAGTG 59.596 45.833 0.00 0.00 30.36 3.66
1876 2274 5.128499 AGTTGATCTTACCAGAGTCATCCAG 59.872 44.000 0.00 0.00 30.36 3.86
2055 2459 3.591196 TTTGGTGCCTTCATAACATGC 57.409 42.857 0.00 0.00 0.00 4.06
2070 2474 4.640771 TCTATCTCCAAGCTGTTTTGGT 57.359 40.909 2.14 0.00 46.23 3.67
2077 2481 3.548770 TGGCAATTCTATCTCCAAGCTG 58.451 45.455 0.00 0.00 0.00 4.24
2118 2522 1.307355 TATTGGCCGAGACACGACGA 61.307 55.000 0.00 0.00 45.77 4.20
2210 2618 9.944376 TGATAGCTTTATAACTTCTCTTGTGTT 57.056 29.630 0.00 0.00 0.00 3.32
2213 2621 9.050601 GCATGATAGCTTTATAACTTCTCTTGT 57.949 33.333 0.00 0.00 0.00 3.16
2214 2622 9.049523 TGCATGATAGCTTTATAACTTCTCTTG 57.950 33.333 0.00 0.00 34.99 3.02
2215 2623 9.790344 ATGCATGATAGCTTTATAACTTCTCTT 57.210 29.630 0.00 0.00 34.99 2.85
2276 2704 9.131791 ACACTAAAAGATGAAACCACTTTATGT 57.868 29.630 0.00 0.00 34.18 2.29
2332 2768 0.443869 CACGGCCAATCGAGAACAAG 59.556 55.000 2.24 0.00 0.00 3.16
2367 2803 5.010112 GCATGTACTAGTATGGCAGAGAAGA 59.990 44.000 5.75 0.00 0.00 2.87
2368 2804 5.221322 TGCATGTACTAGTATGGCAGAGAAG 60.221 44.000 17.06 0.00 0.00 2.85
2369 2805 4.649218 TGCATGTACTAGTATGGCAGAGAA 59.351 41.667 17.06 1.24 0.00 2.87
2370 2806 4.038042 GTGCATGTACTAGTATGGCAGAGA 59.962 45.833 19.85 3.10 0.00 3.10
2371 2807 4.202151 TGTGCATGTACTAGTATGGCAGAG 60.202 45.833 19.85 7.63 0.00 3.35
2372 2808 3.704061 TGTGCATGTACTAGTATGGCAGA 59.296 43.478 19.85 17.30 0.00 4.26
2373 2809 3.804325 GTGTGCATGTACTAGTATGGCAG 59.196 47.826 19.85 6.44 0.00 4.85
2374 2810 3.196685 TGTGTGCATGTACTAGTATGGCA 59.803 43.478 15.25 17.06 0.00 4.92
2375 2811 3.792401 TGTGTGCATGTACTAGTATGGC 58.208 45.455 15.25 10.56 0.00 4.40
2376 2812 6.925610 AATTGTGTGCATGTACTAGTATGG 57.074 37.500 15.25 0.26 0.00 2.74
2379 2815 9.713713 TCTTTTAATTGTGTGCATGTACTAGTA 57.286 29.630 15.25 0.00 0.00 1.82
2380 2816 8.504005 GTCTTTTAATTGTGTGCATGTACTAGT 58.496 33.333 15.25 0.00 0.00 2.57
2381 2817 8.503196 TGTCTTTTAATTGTGTGCATGTACTAG 58.497 33.333 15.25 0.00 0.00 2.57
2382 2818 8.384607 TGTCTTTTAATTGTGTGCATGTACTA 57.615 30.769 15.25 1.65 0.00 1.82
2383 2819 7.270757 TGTCTTTTAATTGTGTGCATGTACT 57.729 32.000 15.25 0.00 0.00 2.73
2384 2820 7.860373 TCTTGTCTTTTAATTGTGTGCATGTAC 59.140 33.333 7.03 7.03 0.00 2.90
2385 2821 7.935520 TCTTGTCTTTTAATTGTGTGCATGTA 58.064 30.769 0.00 0.00 0.00 2.29
2386 2822 6.804677 TCTTGTCTTTTAATTGTGTGCATGT 58.195 32.000 0.00 0.00 0.00 3.21
2387 2823 7.697352 TTCTTGTCTTTTAATTGTGTGCATG 57.303 32.000 0.00 0.00 0.00 4.06
2388 2824 8.891671 ATTTCTTGTCTTTTAATTGTGTGCAT 57.108 26.923 0.00 0.00 0.00 3.96
2389 2825 9.809096 TTATTTCTTGTCTTTTAATTGTGTGCA 57.191 25.926 0.00 0.00 0.00 4.57
2400 2836 9.077885 TCCAGCAAGTATTATTTCTTGTCTTTT 57.922 29.630 0.00 0.00 41.83 2.27
2401 2837 8.635765 TCCAGCAAGTATTATTTCTTGTCTTT 57.364 30.769 0.00 0.00 41.83 2.52
2402 2838 8.635765 TTCCAGCAAGTATTATTTCTTGTCTT 57.364 30.769 0.00 0.00 41.83 3.01
2403 2839 8.814038 ATTCCAGCAAGTATTATTTCTTGTCT 57.186 30.769 0.00 0.00 41.83 3.41
2404 2840 9.860898 AAATTCCAGCAAGTATTATTTCTTGTC 57.139 29.630 0.00 0.00 41.83 3.18
2570 3007 0.460311 ATAACACGAGGCGGGAAGAG 59.540 55.000 0.00 0.00 32.98 2.85
2867 3343 3.410631 TTCCTTGTAATCACGGCTTCA 57.589 42.857 0.00 0.00 33.66 3.02
2934 3410 8.915871 ATTTGTTCATCACATTTATGCTACAC 57.084 30.769 0.00 0.00 34.43 2.90
3014 3517 5.862924 TCTTTCTCGGTTTTCAATAGCTG 57.137 39.130 0.00 0.00 0.00 4.24
3055 3559 9.653287 CCTTTTTACTGGTTTCTTTCTTTCTTT 57.347 29.630 0.00 0.00 0.00 2.52
3123 3635 2.159310 TCACACGCTTTCCAGGTTTTTG 60.159 45.455 0.00 0.00 0.00 2.44
3125 3637 1.757682 TCACACGCTTTCCAGGTTTT 58.242 45.000 0.00 0.00 0.00 2.43
3126 3638 1.757682 TTCACACGCTTTCCAGGTTT 58.242 45.000 0.00 0.00 0.00 3.27
3127 3639 1.757682 TTTCACACGCTTTCCAGGTT 58.242 45.000 0.00 0.00 0.00 3.50
3128 3640 1.404035 GTTTTCACACGCTTTCCAGGT 59.596 47.619 0.00 0.00 0.00 4.00
3129 3641 1.269051 GGTTTTCACACGCTTTCCAGG 60.269 52.381 0.00 0.00 0.00 4.45
3151 3663 3.128068 GGTGAACTTGAACAAAACGACCT 59.872 43.478 0.00 0.00 0.00 3.85
3156 3668 3.849708 GTCACGGTGAACTTGAACAAAAC 59.150 43.478 13.23 0.00 0.00 2.43
3181 3693 9.683870 ACGGAAACCAATACACCTTATATTAAA 57.316 29.630 0.00 0.00 0.00 1.52
3185 3697 5.529800 GCACGGAAACCAATACACCTTATAT 59.470 40.000 0.00 0.00 0.00 0.86
3186 3698 4.877251 GCACGGAAACCAATACACCTTATA 59.123 41.667 0.00 0.00 0.00 0.98
3191 3703 1.240256 TGCACGGAAACCAATACACC 58.760 50.000 0.00 0.00 0.00 4.16
3192 3704 2.292292 ACTTGCACGGAAACCAATACAC 59.708 45.455 0.00 0.00 0.00 2.90
3193 3705 2.550606 GACTTGCACGGAAACCAATACA 59.449 45.455 0.00 0.00 0.00 2.29
3194 3706 2.550606 TGACTTGCACGGAAACCAATAC 59.449 45.455 0.00 0.00 0.00 1.89
3195 3707 2.852449 TGACTTGCACGGAAACCAATA 58.148 42.857 0.00 0.00 0.00 1.90
3196 3708 1.686355 TGACTTGCACGGAAACCAAT 58.314 45.000 0.00 0.00 0.00 3.16
3197 3709 1.464734 TTGACTTGCACGGAAACCAA 58.535 45.000 0.00 0.00 0.00 3.67
3198 3710 1.464734 TTTGACTTGCACGGAAACCA 58.535 45.000 0.00 0.00 0.00 3.67
3199 3711 2.793278 ATTTGACTTGCACGGAAACC 57.207 45.000 0.00 0.00 0.00 3.27
3200 3712 5.918011 TCAAATATTTGACTTGCACGGAAAC 59.082 36.000 23.86 0.00 41.88 2.78
3201 3713 6.078202 TCAAATATTTGACTTGCACGGAAA 57.922 33.333 23.86 0.67 41.88 3.13
3202 3714 5.697473 TCAAATATTTGACTTGCACGGAA 57.303 34.783 23.86 0.86 41.88 4.30
3203 3715 5.697473 TTCAAATATTTGACTTGCACGGA 57.303 34.783 26.69 9.37 45.99 4.69
3204 3716 5.863397 ACATTCAAATATTTGACTTGCACGG 59.137 36.000 26.69 12.98 45.99 4.94
3205 3717 6.932901 ACATTCAAATATTTGACTTGCACG 57.067 33.333 26.69 13.56 45.99 5.34
3206 3718 8.763356 TCAAACATTCAAATATTTGACTTGCAC 58.237 29.630 26.69 0.00 45.99 4.57
3207 3719 8.883954 TCAAACATTCAAATATTTGACTTGCA 57.116 26.923 26.69 14.59 45.99 4.08
3288 3800 9.246670 TGATTTGATCCATCATGAAAAGTAGTT 57.753 29.630 0.00 0.00 36.56 2.24
3289 3801 8.812513 TGATTTGATCCATCATGAAAAGTAGT 57.187 30.769 0.00 0.00 36.56 2.73
3324 3836 9.767684 GAAAAATATATCAACATTCACGACACA 57.232 29.630 0.00 0.00 0.00 3.72
3325 3837 9.988350 AGAAAAATATATCAACATTCACGACAC 57.012 29.630 0.00 0.00 0.00 3.67
3344 3856 9.083080 CAAGTTTGACCGAGTTTTTAGAAAAAT 57.917 29.630 3.64 0.00 39.75 1.82
3345 3857 7.062488 GCAAGTTTGACCGAGTTTTTAGAAAAA 59.938 33.333 0.00 0.00 35.67 1.94
3346 3858 6.528774 GCAAGTTTGACCGAGTTTTTAGAAAA 59.471 34.615 0.00 0.00 0.00 2.29
3347 3859 6.031471 GCAAGTTTGACCGAGTTTTTAGAAA 58.969 36.000 0.00 0.00 0.00 2.52
3348 3860 5.124138 TGCAAGTTTGACCGAGTTTTTAGAA 59.876 36.000 0.00 0.00 0.00 2.10
3349 3861 4.636648 TGCAAGTTTGACCGAGTTTTTAGA 59.363 37.500 0.00 0.00 0.00 2.10
3350 3862 4.733405 GTGCAAGTTTGACCGAGTTTTTAG 59.267 41.667 0.00 0.00 0.00 1.85
3351 3863 4.396790 AGTGCAAGTTTGACCGAGTTTTTA 59.603 37.500 0.00 0.00 0.00 1.52
3352 3864 3.192633 AGTGCAAGTTTGACCGAGTTTTT 59.807 39.130 0.00 0.00 0.00 1.94
3353 3865 2.752903 AGTGCAAGTTTGACCGAGTTTT 59.247 40.909 0.00 0.00 0.00 2.43
3354 3866 2.354821 GAGTGCAAGTTTGACCGAGTTT 59.645 45.455 0.00 0.00 0.00 2.66
3355 3867 1.940613 GAGTGCAAGTTTGACCGAGTT 59.059 47.619 0.00 0.00 0.00 3.01
3356 3868 1.134521 TGAGTGCAAGTTTGACCGAGT 60.135 47.619 0.00 0.00 0.00 4.18
3357 3869 1.581934 TGAGTGCAAGTTTGACCGAG 58.418 50.000 0.00 0.00 0.00 4.63
3358 3870 2.254546 ATGAGTGCAAGTTTGACCGA 57.745 45.000 0.00 0.00 0.00 4.69
3359 3871 3.044986 CAAATGAGTGCAAGTTTGACCG 58.955 45.455 8.01 0.00 34.38 4.79
3360 3872 4.305989 TCAAATGAGTGCAAGTTTGACC 57.694 40.909 10.95 0.00 36.11 4.02
3362 3874 5.581126 AAGTCAAATGAGTGCAAGTTTGA 57.419 34.783 10.95 10.95 38.01 2.69
3363 3875 6.310956 TGAAAAGTCAAATGAGTGCAAGTTTG 59.689 34.615 0.00 0.00 33.91 2.93
3364 3876 6.397272 TGAAAAGTCAAATGAGTGCAAGTTT 58.603 32.000 0.00 0.00 0.00 2.66
3365 3877 5.964758 TGAAAAGTCAAATGAGTGCAAGTT 58.035 33.333 0.00 0.00 0.00 2.66
3366 3878 5.581126 TGAAAAGTCAAATGAGTGCAAGT 57.419 34.783 0.00 0.00 0.00 3.16
3367 3879 6.890663 TTTGAAAAGTCAAATGAGTGCAAG 57.109 33.333 0.00 0.00 46.48 4.01
3393 3905 9.333724 CCGTTCCTTTATATAAGGTGTATTTGT 57.666 33.333 4.13 0.00 38.55 2.83
3394 3906 9.550406 TCCGTTCCTTTATATAAGGTGTATTTG 57.450 33.333 4.13 0.00 38.55 2.32
3395 3907 9.774413 CTCCGTTCCTTTATATAAGGTGTATTT 57.226 33.333 4.13 0.00 38.55 1.40
3396 3908 8.373220 CCTCCGTTCCTTTATATAAGGTGTATT 58.627 37.037 4.13 0.00 38.55 1.89
3397 3909 7.038516 CCCTCCGTTCCTTTATATAAGGTGTAT 60.039 40.741 4.13 0.00 38.55 2.29
3398 3910 6.268387 CCCTCCGTTCCTTTATATAAGGTGTA 59.732 42.308 4.13 0.00 38.55 2.90
3399 3911 5.071384 CCCTCCGTTCCTTTATATAAGGTGT 59.929 44.000 4.13 0.00 38.55 4.16
3400 3912 5.306160 TCCCTCCGTTCCTTTATATAAGGTG 59.694 44.000 4.13 0.00 38.55 4.00
3401 3913 5.470501 TCCCTCCGTTCCTTTATATAAGGT 58.529 41.667 4.13 0.00 38.55 3.50
3402 3914 5.543020 ACTCCCTCCGTTCCTTTATATAAGG 59.457 44.000 0.00 0.00 38.78 2.69
3403 3915 6.667558 ACTCCCTCCGTTCCTTTATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
3404 3916 8.731591 AATACTCCCTCCGTTCCTTTATATAA 57.268 34.615 0.00 0.00 0.00 0.98
3405 3917 8.731591 AAATACTCCCTCCGTTCCTTTATATA 57.268 34.615 0.00 0.00 0.00 0.86
3406 3918 7.628501 AAATACTCCCTCCGTTCCTTTATAT 57.371 36.000 0.00 0.00 0.00 0.86
3407 3919 7.346436 AGAAAATACTCCCTCCGTTCCTTTATA 59.654 37.037 0.00 0.00 0.00 0.98
3408 3920 5.970501 AAATACTCCCTCCGTTCCTTTAT 57.029 39.130 0.00 0.00 0.00 1.40
3409 3921 5.486419 AGAAAATACTCCCTCCGTTCCTTTA 59.514 40.000 0.00 0.00 0.00 1.85
3410 3922 4.288887 AGAAAATACTCCCTCCGTTCCTTT 59.711 41.667 0.00 0.00 0.00 3.11
3411 3923 3.844804 AGAAAATACTCCCTCCGTTCCTT 59.155 43.478 0.00 0.00 0.00 3.36
3412 3924 3.451890 AGAAAATACTCCCTCCGTTCCT 58.548 45.455 0.00 0.00 0.00 3.36
3413 3925 3.908643 AGAAAATACTCCCTCCGTTCC 57.091 47.619 0.00 0.00 0.00 3.62
3414 3926 6.346896 ACATTAGAAAATACTCCCTCCGTTC 58.653 40.000 0.00 0.00 0.00 3.95
3415 3927 6.309389 ACATTAGAAAATACTCCCTCCGTT 57.691 37.500 0.00 0.00 0.00 4.44
3416 3928 5.952347 ACATTAGAAAATACTCCCTCCGT 57.048 39.130 0.00 0.00 0.00 4.69
3417 3929 7.625828 AAAACATTAGAAAATACTCCCTCCG 57.374 36.000 0.00 0.00 0.00 4.63
3439 3951 6.453926 AAACCGCTAAAACCTAGTGAAAAA 57.546 33.333 0.00 0.00 0.00 1.94
3440 3952 6.453926 AAAACCGCTAAAACCTAGTGAAAA 57.546 33.333 0.00 0.00 0.00 2.29
3441 3953 6.453926 AAAAACCGCTAAAACCTAGTGAAA 57.546 33.333 0.00 0.00 0.00 2.69
3465 3977 9.745018 AGAGAGAGATGGATAAAATGAAAAACA 57.255 29.630 0.00 0.00 0.00 2.83
3478 3990 8.991275 AGACAAGAAAATAAGAGAGAGATGGAT 58.009 33.333 0.00 0.00 0.00 3.41
3479 3991 8.372877 AGACAAGAAAATAAGAGAGAGATGGA 57.627 34.615 0.00 0.00 0.00 3.41
3480 3992 9.447157 AAAGACAAGAAAATAAGAGAGAGATGG 57.553 33.333 0.00 0.00 0.00 3.51
3525 4037 9.932207 TGAAACATTGCTCAGAAATTCAAATAT 57.068 25.926 0.00 0.00 0.00 1.28
3526 4038 9.414295 CTGAAACATTGCTCAGAAATTCAAATA 57.586 29.630 9.68 0.00 41.38 1.40
3527 4039 8.145767 TCTGAAACATTGCTCAGAAATTCAAAT 58.854 29.630 13.81 0.00 43.90 2.32
3528 4040 7.490840 TCTGAAACATTGCTCAGAAATTCAAA 58.509 30.769 13.81 0.00 43.90 2.69
3529 4041 7.041635 TCTGAAACATTGCTCAGAAATTCAA 57.958 32.000 13.81 0.00 43.90 2.69
3530 4042 6.638096 TCTGAAACATTGCTCAGAAATTCA 57.362 33.333 13.81 0.00 43.90 2.57
3537 4049 6.250344 TCTGAAATCTGAAACATTGCTCAG 57.750 37.500 9.17 9.17 40.42 3.35
3538 4050 6.638096 TTCTGAAATCTGAAACATTGCTCA 57.362 33.333 0.85 0.00 32.14 4.26
3539 4051 7.935338 TTTTCTGAAATCTGAAACATTGCTC 57.065 32.000 13.04 0.00 41.38 4.26
3561 4073 8.716909 ACATTTTCAGAAAACACGAACATTTTT 58.283 25.926 10.62 0.00 32.37 1.94
3562 4074 8.250538 ACATTTTCAGAAAACACGAACATTTT 57.749 26.923 10.62 0.00 32.37 1.82
3563 4075 7.826260 ACATTTTCAGAAAACACGAACATTT 57.174 28.000 10.62 0.00 32.37 2.32
3564 4076 7.826260 AACATTTTCAGAAAACACGAACATT 57.174 28.000 10.62 0.00 32.37 2.71
3565 4077 7.330700 ACAAACATTTTCAGAAAACACGAACAT 59.669 29.630 10.62 0.00 32.37 2.71
3566 4078 6.642950 ACAAACATTTTCAGAAAACACGAACA 59.357 30.769 10.62 0.00 32.37 3.18
3567 4079 7.044589 ACAAACATTTTCAGAAAACACGAAC 57.955 32.000 10.62 0.00 32.37 3.95
3568 4080 8.918961 ATACAAACATTTTCAGAAAACACGAA 57.081 26.923 10.62 0.00 32.37 3.85
3569 4081 8.918961 AATACAAACATTTTCAGAAAACACGA 57.081 26.923 10.62 0.00 32.37 4.35
3570 4082 9.965748 AAAATACAAACATTTTCAGAAAACACG 57.034 25.926 10.62 5.41 33.82 4.49
3628 4140 9.103861 GGAAAACATGTGAAAACTTAAATTCCA 57.896 29.630 0.00 0.00 32.41 3.53
3629 4141 9.103861 TGGAAAACATGTGAAAACTTAAATTCC 57.896 29.630 0.00 0.00 0.00 3.01
3682 4194 9.565213 CCAAACATTACTTCAAAATTGCAAAAA 57.435 25.926 1.71 0.00 0.00 1.94
3683 4195 8.950210 TCCAAACATTACTTCAAAATTGCAAAA 58.050 25.926 1.71 0.00 0.00 2.44
3684 4196 8.498054 TCCAAACATTACTTCAAAATTGCAAA 57.502 26.923 1.71 0.00 0.00 3.68
3685 4197 8.498054 TTCCAAACATTACTTCAAAATTGCAA 57.502 26.923 0.00 0.00 0.00 4.08
3686 4198 8.674263 ATTCCAAACATTACTTCAAAATTGCA 57.326 26.923 0.00 0.00 0.00 4.08
3687 4199 9.949174 AAATTCCAAACATTACTTCAAAATTGC 57.051 25.926 0.00 0.00 0.00 3.56
3701 4213 9.824534 GCGAATAAAATTTGAAATTCCAAACAT 57.175 25.926 3.32 0.00 38.65 2.71
3702 4214 8.830580 TGCGAATAAAATTTGAAATTCCAAACA 58.169 25.926 3.32 0.00 38.65 2.83
3703 4215 9.657121 TTGCGAATAAAATTTGAAATTCCAAAC 57.343 25.926 3.32 0.00 38.65 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.