Multiple sequence alignment - TraesCS3D01G079200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G079200 chr3D 100.000 5013 0 0 1 5013 39385514 39390526 0.000000e+00 9258
1 TraesCS3D01G079200 chr3B 91.564 2181 128 29 799 2955 62945092 62947240 0.000000e+00 2957
2 TraesCS3D01G079200 chr3B 89.289 2082 119 42 2967 5013 62947370 62949382 0.000000e+00 2514
3 TraesCS3D01G079200 chr3A 92.772 2006 92 24 1253 3231 50888843 50890822 0.000000e+00 2852
4 TraesCS3D01G079200 chr3A 93.377 1057 57 7 3376 4430 50890900 50891945 0.000000e+00 1552
5 TraesCS3D01G079200 chr3A 88.287 683 36 23 4361 5013 50892082 50892750 0.000000e+00 778
6 TraesCS3D01G079200 chr3A 88.627 466 27 13 806 1245 50888308 50888773 1.230000e-150 544
7 TraesCS3D01G079200 chr2A 87.339 387 36 9 130 507 81760643 81761025 9.970000e-117 431
8 TraesCS3D01G079200 chr6B 86.387 382 35 11 131 508 184891867 184892235 7.820000e-108 401
9 TraesCS3D01G079200 chr7B 85.825 388 41 9 120 504 71220 71596 2.810000e-107 399
10 TraesCS3D01G079200 chr7B 85.677 384 37 12 121 500 645254653 645254284 6.090000e-104 388
11 TraesCS3D01G079200 chr7D 86.316 380 35 11 130 506 11310374 11310739 1.010000e-106 398
12 TraesCS3D01G079200 chr7D 84.694 392 44 11 118 504 43042741 43043121 1.320000e-100 377
13 TraesCS3D01G079200 chr4D 84.783 368 42 12 120 482 507973492 507973850 1.720000e-94 357
14 TraesCS3D01G079200 chr2D 82.828 396 47 15 120 504 13676772 13676387 8.040000e-88 335
15 TraesCS3D01G079200 chr2D 80.856 397 53 15 119 507 20687252 20687633 1.770000e-74 291


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G079200 chr3D 39385514 39390526 5012 False 9258.0 9258 100.00000 1 5013 1 chr3D.!!$F1 5012
1 TraesCS3D01G079200 chr3B 62945092 62949382 4290 False 2735.5 2957 90.42650 799 5013 2 chr3B.!!$F1 4214
2 TraesCS3D01G079200 chr3A 50888308 50892750 4442 False 1431.5 2852 90.76575 806 5013 4 chr3A.!!$F1 4207

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
574 575 0.033642 TATGTTTCGCGTGGTGACCA 59.966 50.0 5.77 0.00 0.00 4.02 F
737 738 0.110238 CGAATTGCCCTTGTCACGTG 60.110 55.0 9.94 9.94 0.00 4.49 F
1564 1659 0.175760 TATGCTCCTGTCAGAACCGC 59.824 55.0 0.00 0.00 0.00 5.68 F
1599 1697 0.539051 ATGGCTCGACTCTTTCTGGG 59.461 55.0 0.00 0.00 0.00 4.45 F
1943 2054 1.078709 TTCAGGAGCTGAATTTCGCG 58.921 50.0 0.00 0.00 44.27 5.87 F
3355 3603 0.482446 TTGGCTGTCTTTGTCCCCAT 59.518 50.0 0.00 0.00 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2007 2118 0.033601 TTCCAGCCAACAACACCACT 60.034 50.000 0.00 0.00 0.00 4.00 R
2393 2508 0.039165 GCCAAACCACAACAGCTAGC 60.039 55.000 6.62 6.62 0.00 3.42 R
2964 3205 0.035630 AGACCACAGGAGCTTCATGC 60.036 55.000 0.00 0.00 43.29 4.06 R
2973 3214 1.055849 TTGCAGCTTAGACCACAGGA 58.944 50.000 0.00 0.00 0.00 3.86 R
3706 3954 0.743097 GCCATCCAGCAGATTCAACC 59.257 55.000 0.00 0.00 30.59 3.77 R
4417 4668 1.755380 GTTCGTCCAGTGTAGCCCTAT 59.245 52.381 0.00 0.00 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.263018 TGCTCTTCCGGATCTTGATATG 57.737 45.455 4.15 0.00 0.00 1.78
22 23 3.897505 TGCTCTTCCGGATCTTGATATGA 59.102 43.478 4.15 0.00 0.00 2.15
23 24 4.241681 GCTCTTCCGGATCTTGATATGAC 58.758 47.826 4.15 0.00 0.00 3.06
24 25 4.480541 CTCTTCCGGATCTTGATATGACG 58.519 47.826 4.15 0.00 0.00 4.35
25 26 2.724977 TCCGGATCTTGATATGACGC 57.275 50.000 0.00 0.00 0.00 5.19
26 27 1.068541 TCCGGATCTTGATATGACGCG 60.069 52.381 3.53 3.53 0.00 6.01
27 28 1.340658 CGGATCTTGATATGACGCGG 58.659 55.000 12.47 0.00 0.00 6.46
28 29 1.335964 CGGATCTTGATATGACGCGGT 60.336 52.381 12.47 0.00 0.00 5.68
29 30 2.755650 GGATCTTGATATGACGCGGTT 58.244 47.619 12.47 0.00 0.00 4.44
30 31 2.731976 GGATCTTGATATGACGCGGTTC 59.268 50.000 12.47 0.00 0.00 3.62
31 32 2.218953 TCTTGATATGACGCGGTTCC 57.781 50.000 12.47 0.00 0.00 3.62
32 33 1.202486 TCTTGATATGACGCGGTTCCC 60.202 52.381 12.47 0.00 0.00 3.97
33 34 0.179067 TTGATATGACGCGGTTCCCC 60.179 55.000 12.47 0.00 0.00 4.81
34 35 1.301479 GATATGACGCGGTTCCCCC 60.301 63.158 12.47 0.00 0.00 5.40
43 44 3.998156 GGTTCCCCCGCTTTCTTC 58.002 61.111 0.00 0.00 0.00 2.87
44 45 1.074248 GGTTCCCCCGCTTTCTTCA 59.926 57.895 0.00 0.00 0.00 3.02
45 46 0.538746 GGTTCCCCCGCTTTCTTCAA 60.539 55.000 0.00 0.00 0.00 2.69
46 47 0.596577 GTTCCCCCGCTTTCTTCAAC 59.403 55.000 0.00 0.00 0.00 3.18
47 48 0.887387 TTCCCCCGCTTTCTTCAACG 60.887 55.000 0.00 0.00 0.00 4.10
48 49 1.599797 CCCCCGCTTTCTTCAACGT 60.600 57.895 0.00 0.00 0.00 3.99
49 50 1.170290 CCCCCGCTTTCTTCAACGTT 61.170 55.000 0.00 0.00 0.00 3.99
50 51 0.040425 CCCCGCTTTCTTCAACGTTG 60.040 55.000 22.35 22.35 0.00 4.10
51 52 0.660300 CCCGCTTTCTTCAACGTTGC 60.660 55.000 23.47 8.88 0.00 4.17
52 53 0.660300 CCGCTTTCTTCAACGTTGCC 60.660 55.000 23.47 4.59 0.00 4.52
53 54 0.307760 CGCTTTCTTCAACGTTGCCT 59.692 50.000 23.47 0.00 0.00 4.75
54 55 1.660333 CGCTTTCTTCAACGTTGCCTC 60.660 52.381 23.47 6.87 0.00 4.70
55 56 1.660333 GCTTTCTTCAACGTTGCCTCG 60.660 52.381 23.47 10.84 0.00 4.63
56 57 0.941542 TTTCTTCAACGTTGCCTCGG 59.058 50.000 23.47 10.63 34.94 4.63
57 58 0.179067 TTCTTCAACGTTGCCTCGGT 60.179 50.000 23.47 0.00 34.94 4.69
59 60 2.443957 CTTCAACGTTGCCTCGGTGC 62.444 60.000 23.47 0.00 46.36 5.01
60 61 4.025401 CAACGTTGCCTCGGTGCC 62.025 66.667 16.51 0.00 41.45 5.01
61 62 4.555709 AACGTTGCCTCGGTGCCA 62.556 61.111 0.00 0.00 34.94 4.92
62 63 4.988598 ACGTTGCCTCGGTGCCAG 62.989 66.667 2.99 0.00 34.94 4.85
63 64 4.988598 CGTTGCCTCGGTGCCAGT 62.989 66.667 0.00 0.00 0.00 4.00
64 65 2.345991 GTTGCCTCGGTGCCAGTA 59.654 61.111 0.00 0.00 0.00 2.74
65 66 1.741770 GTTGCCTCGGTGCCAGTAG 60.742 63.158 0.00 0.00 0.00 2.57
66 67 1.911269 TTGCCTCGGTGCCAGTAGA 60.911 57.895 0.00 0.00 0.00 2.59
67 68 1.888436 TTGCCTCGGTGCCAGTAGAG 61.888 60.000 0.00 0.00 0.00 2.43
68 69 3.211288 CCTCGGTGCCAGTAGAGG 58.789 66.667 0.00 0.00 43.43 3.69
69 70 4.338815 CTCGGTGCCAGTAGAGGA 57.661 61.111 0.00 0.00 0.00 3.71
70 71 1.810532 CTCGGTGCCAGTAGAGGAC 59.189 63.158 0.00 0.00 0.00 3.85
71 72 0.681564 CTCGGTGCCAGTAGAGGACT 60.682 60.000 0.00 0.00 39.82 3.85
72 73 0.622136 TCGGTGCCAGTAGAGGACTA 59.378 55.000 0.00 0.00 35.64 2.59
73 74 1.214673 TCGGTGCCAGTAGAGGACTAT 59.785 52.381 0.00 0.00 35.64 2.12
74 75 1.338337 CGGTGCCAGTAGAGGACTATG 59.662 57.143 0.00 0.00 35.64 2.23
75 76 1.689273 GGTGCCAGTAGAGGACTATGG 59.311 57.143 0.00 0.00 35.64 2.74
76 77 2.389715 GTGCCAGTAGAGGACTATGGT 58.610 52.381 0.00 0.00 35.64 3.55
77 78 2.101582 GTGCCAGTAGAGGACTATGGTG 59.898 54.545 0.00 0.00 35.64 4.17
78 79 1.689273 GCCAGTAGAGGACTATGGTGG 59.311 57.143 0.00 0.00 35.64 4.61
79 80 2.690026 GCCAGTAGAGGACTATGGTGGA 60.690 54.545 0.00 0.00 35.64 4.02
80 81 2.959707 CCAGTAGAGGACTATGGTGGAC 59.040 54.545 0.00 0.00 35.64 4.02
81 82 2.619177 CAGTAGAGGACTATGGTGGACG 59.381 54.545 0.00 0.00 35.64 4.79
82 83 2.508716 AGTAGAGGACTATGGTGGACGA 59.491 50.000 0.00 0.00 36.27 4.20
83 84 1.765230 AGAGGACTATGGTGGACGAC 58.235 55.000 0.00 0.00 0.00 4.34
84 85 0.381089 GAGGACTATGGTGGACGACG 59.619 60.000 0.00 0.00 0.00 5.12
85 86 0.323178 AGGACTATGGTGGACGACGT 60.323 55.000 0.00 0.00 0.00 4.34
86 87 0.529378 GGACTATGGTGGACGACGTT 59.471 55.000 0.13 0.00 0.00 3.99
87 88 1.067354 GGACTATGGTGGACGACGTTT 60.067 52.381 0.13 0.00 0.00 3.60
88 89 2.257034 GACTATGGTGGACGACGTTTC 58.743 52.381 0.13 0.00 0.00 2.78
89 90 1.614903 ACTATGGTGGACGACGTTTCA 59.385 47.619 0.13 1.06 0.00 2.69
90 91 2.259618 CTATGGTGGACGACGTTTCAG 58.740 52.381 0.13 0.00 0.00 3.02
91 92 0.949105 ATGGTGGACGACGTTTCAGC 60.949 55.000 20.12 20.12 0.00 4.26
92 93 2.654912 GGTGGACGACGTTTCAGCG 61.655 63.158 15.07 0.00 37.94 5.18
94 95 1.947146 TGGACGACGTTTCAGCGTG 60.947 57.895 0.13 0.00 45.79 5.34
95 96 2.654912 GGACGACGTTTCAGCGTGG 61.655 63.158 0.13 0.00 45.79 4.94
96 97 3.277742 GACGACGTTTCAGCGTGGC 62.278 63.158 0.13 0.00 45.79 5.01
97 98 3.334751 CGACGTTTCAGCGTGGCA 61.335 61.111 0.00 0.00 45.79 4.92
98 99 2.667318 CGACGTTTCAGCGTGGCAT 61.667 57.895 0.00 0.00 45.79 4.40
99 100 1.154413 GACGTTTCAGCGTGGCATG 60.154 57.895 1.31 1.31 45.79 4.06
100 101 1.565156 GACGTTTCAGCGTGGCATGA 61.565 55.000 11.71 0.00 45.79 3.07
101 102 1.163420 ACGTTTCAGCGTGGCATGAA 61.163 50.000 11.71 4.22 43.99 2.57
102 103 0.040514 CGTTTCAGCGTGGCATGAAA 60.041 50.000 11.71 10.68 41.76 2.69
103 104 1.401409 CGTTTCAGCGTGGCATGAAAT 60.401 47.619 15.49 0.00 44.65 2.17
104 105 2.253603 GTTTCAGCGTGGCATGAAATC 58.746 47.619 15.49 7.90 44.65 2.17
105 106 0.810648 TTCAGCGTGGCATGAAATCC 59.189 50.000 11.71 0.00 32.66 3.01
106 107 0.035152 TCAGCGTGGCATGAAATCCT 60.035 50.000 11.71 0.00 0.00 3.24
107 108 0.813184 CAGCGTGGCATGAAATCCTT 59.187 50.000 11.71 0.00 0.00 3.36
108 109 1.203052 CAGCGTGGCATGAAATCCTTT 59.797 47.619 11.71 0.00 0.00 3.11
109 110 1.474077 AGCGTGGCATGAAATCCTTTC 59.526 47.619 11.71 0.00 40.08 2.62
136 137 6.043854 GGTGAAATTAAACCCCATTAAGCA 57.956 37.500 0.00 0.00 0.00 3.91
137 138 6.649155 GGTGAAATTAAACCCCATTAAGCAT 58.351 36.000 0.00 0.00 0.00 3.79
138 139 6.761242 GGTGAAATTAAACCCCATTAAGCATC 59.239 38.462 0.00 0.00 0.00 3.91
139 140 6.475402 GTGAAATTAAACCCCATTAAGCATCG 59.525 38.462 0.00 0.00 0.00 3.84
140 141 4.584327 ATTAAACCCCATTAAGCATCGC 57.416 40.909 0.00 0.00 0.00 4.58
141 142 0.738389 AAACCCCATTAAGCATCGCG 59.262 50.000 0.00 0.00 0.00 5.87
142 143 0.393808 AACCCCATTAAGCATCGCGT 60.394 50.000 5.77 0.00 0.00 6.01
143 144 1.095228 ACCCCATTAAGCATCGCGTG 61.095 55.000 5.77 5.06 0.00 5.34
144 145 0.813610 CCCCATTAAGCATCGCGTGA 60.814 55.000 5.77 0.00 0.00 4.35
145 146 1.013596 CCCATTAAGCATCGCGTGAA 58.986 50.000 5.77 0.00 0.00 3.18
146 147 1.003545 CCCATTAAGCATCGCGTGAAG 60.004 52.381 5.77 0.00 0.00 3.02
147 148 1.003545 CCATTAAGCATCGCGTGAAGG 60.004 52.381 5.77 0.00 0.00 3.46
148 149 1.003545 CATTAAGCATCGCGTGAAGGG 60.004 52.381 5.77 0.00 0.00 3.95
149 150 1.366111 TTAAGCATCGCGTGAAGGGC 61.366 55.000 5.77 7.66 0.00 5.19
158 159 4.966787 GTGAAGGGCGGCCAACCA 62.967 66.667 31.59 20.58 34.57 3.67
159 160 4.659172 TGAAGGGCGGCCAACCAG 62.659 66.667 31.59 0.00 34.57 4.00
163 164 4.506255 GGGCGGCCAACCAGCTAT 62.506 66.667 25.33 0.00 36.24 2.97
164 165 3.211963 GGCGGCCAACCAGCTATG 61.212 66.667 15.62 0.00 36.24 2.23
165 166 3.892581 GCGGCCAACCAGCTATGC 61.893 66.667 2.24 0.00 34.11 3.14
166 167 3.211963 CGGCCAACCAGCTATGCC 61.212 66.667 2.24 0.00 38.74 4.40
167 168 2.044053 GGCCAACCAGCTATGCCA 60.044 61.111 0.00 0.00 41.76 4.92
168 169 2.418083 GGCCAACCAGCTATGCCAC 61.418 63.158 0.00 0.00 41.76 5.01
169 170 1.678635 GCCAACCAGCTATGCCACA 60.679 57.895 0.00 0.00 0.00 4.17
170 171 1.039233 GCCAACCAGCTATGCCACAT 61.039 55.000 0.00 0.00 0.00 3.21
171 172 0.742505 CCAACCAGCTATGCCACATG 59.257 55.000 0.00 0.00 0.00 3.21
172 173 0.742505 CAACCAGCTATGCCACATGG 59.257 55.000 0.00 0.00 37.07 3.66
182 183 2.259204 CCACATGGCGCAAGTTGG 59.741 61.111 10.83 4.65 41.68 3.77
183 184 2.563798 CCACATGGCGCAAGTTGGT 61.564 57.895 10.83 0.00 41.68 3.67
184 185 1.363443 CACATGGCGCAAGTTGGTT 59.637 52.632 10.83 0.00 41.68 3.67
185 186 0.940519 CACATGGCGCAAGTTGGTTG 60.941 55.000 10.83 0.00 39.41 3.77
186 187 1.373246 CATGGCGCAAGTTGGTTGG 60.373 57.895 10.83 0.00 36.56 3.77
187 188 3.225069 ATGGCGCAAGTTGGTTGGC 62.225 57.895 10.83 0.00 36.56 4.52
188 189 4.662961 GGCGCAAGTTGGTTGGCC 62.663 66.667 10.83 0.00 42.01 5.36
189 190 4.999939 GCGCAAGTTGGTTGGCCG 63.000 66.667 0.30 0.00 36.56 6.13
190 191 4.999939 CGCAAGTTGGTTGGCCGC 63.000 66.667 4.75 0.00 36.56 6.53
191 192 3.910490 GCAAGTTGGTTGGCCGCA 61.910 61.111 4.75 0.00 36.56 5.69
192 193 2.336088 CAAGTTGGTTGGCCGCAG 59.664 61.111 0.00 0.00 37.67 5.18
193 194 2.123897 AAGTTGGTTGGCCGCAGT 60.124 55.556 0.00 0.00 37.67 4.40
194 195 2.489275 AAGTTGGTTGGCCGCAGTG 61.489 57.895 0.00 0.00 37.67 3.66
195 196 2.902423 AAGTTGGTTGGCCGCAGTGA 62.902 55.000 0.00 0.00 37.67 3.41
196 197 2.124109 TTGGTTGGCCGCAGTGAA 60.124 55.556 0.00 0.00 37.67 3.18
197 198 1.754621 TTGGTTGGCCGCAGTGAAA 60.755 52.632 0.00 0.00 37.67 2.69
198 199 1.323271 TTGGTTGGCCGCAGTGAAAA 61.323 50.000 0.00 0.00 37.67 2.29
199 200 1.323271 TGGTTGGCCGCAGTGAAAAA 61.323 50.000 0.00 0.00 37.67 1.94
200 201 0.597377 GGTTGGCCGCAGTGAAAAAG 60.597 55.000 0.00 0.00 0.00 2.27
201 202 1.067250 TTGGCCGCAGTGAAAAAGC 59.933 52.632 0.00 0.00 0.00 3.51
202 203 1.391157 TTGGCCGCAGTGAAAAAGCT 61.391 50.000 0.00 0.00 0.00 3.74
203 204 1.363807 GGCCGCAGTGAAAAAGCTT 59.636 52.632 0.00 0.00 0.00 3.74
204 205 0.249447 GGCCGCAGTGAAAAAGCTTT 60.249 50.000 5.69 5.69 0.00 3.51
205 206 1.570813 GCCGCAGTGAAAAAGCTTTT 58.429 45.000 18.74 18.74 0.00 2.27
206 207 1.258720 GCCGCAGTGAAAAAGCTTTTG 59.741 47.619 24.50 13.66 0.00 2.44
207 208 2.808244 CCGCAGTGAAAAAGCTTTTGA 58.192 42.857 24.50 11.96 0.00 2.69
208 209 2.791004 CCGCAGTGAAAAAGCTTTTGAG 59.209 45.455 24.50 13.80 0.00 3.02
209 210 3.489059 CCGCAGTGAAAAAGCTTTTGAGA 60.489 43.478 24.50 9.16 0.00 3.27
210 211 4.293415 CGCAGTGAAAAAGCTTTTGAGAT 58.707 39.130 24.50 9.35 0.00 2.75
211 212 5.451908 CGCAGTGAAAAAGCTTTTGAGATA 58.548 37.500 24.50 7.35 0.00 1.98
212 213 6.088824 CGCAGTGAAAAAGCTTTTGAGATAT 58.911 36.000 24.50 8.21 0.00 1.63
213 214 6.583806 CGCAGTGAAAAAGCTTTTGAGATATT 59.416 34.615 24.50 7.46 0.00 1.28
214 215 7.750458 CGCAGTGAAAAAGCTTTTGAGATATTA 59.250 33.333 24.50 2.47 0.00 0.98
215 216 9.578439 GCAGTGAAAAAGCTTTTGAGATATTAT 57.422 29.630 24.50 5.95 0.00 1.28
238 239 7.741554 ATTACTTTTAGATGGAGGTGAGAGT 57.258 36.000 0.00 0.00 0.00 3.24
239 240 7.554959 TTACTTTTAGATGGAGGTGAGAGTT 57.445 36.000 0.00 0.00 0.00 3.01
240 241 6.441088 ACTTTTAGATGGAGGTGAGAGTTT 57.559 37.500 0.00 0.00 0.00 2.66
241 242 6.842676 ACTTTTAGATGGAGGTGAGAGTTTT 58.157 36.000 0.00 0.00 0.00 2.43
242 243 7.290813 ACTTTTAGATGGAGGTGAGAGTTTTT 58.709 34.615 0.00 0.00 0.00 1.94
278 279 8.704849 TTTTCCTTTTTAGATGAAGGTGATGA 57.295 30.769 2.42 0.00 42.43 2.92
279 280 7.687941 TTCCTTTTTAGATGAAGGTGATGAC 57.312 36.000 2.42 0.00 42.43 3.06
280 281 6.180472 TCCTTTTTAGATGAAGGTGATGACC 58.820 40.000 0.00 0.00 42.43 4.02
312 313 5.455056 TTTTTAAATGAAGGGCTACGCAA 57.545 34.783 0.00 0.00 0.00 4.85
313 314 5.455056 TTTTAAATGAAGGGCTACGCAAA 57.545 34.783 0.00 0.00 0.00 3.68
314 315 4.695217 TTAAATGAAGGGCTACGCAAAG 57.305 40.909 0.00 0.00 0.00 2.77
315 316 2.200373 AATGAAGGGCTACGCAAAGT 57.800 45.000 0.00 0.00 0.00 2.66
316 317 1.453155 ATGAAGGGCTACGCAAAGTG 58.547 50.000 0.00 0.00 0.00 3.16
317 318 0.605319 TGAAGGGCTACGCAAAGTGG 60.605 55.000 0.00 0.00 0.00 4.00
331 332 3.876300 GTGGCGCTCACTGTTAGG 58.124 61.111 18.16 0.00 42.86 2.69
332 333 2.047274 TGGCGCTCACTGTTAGGC 60.047 61.111 7.64 0.00 0.00 3.93
333 334 2.266055 GGCGCTCACTGTTAGGCT 59.734 61.111 7.64 0.00 0.00 4.58
334 335 2.103042 GGCGCTCACTGTTAGGCTG 61.103 63.158 7.64 0.00 0.00 4.85
335 336 2.744768 GCGCTCACTGTTAGGCTGC 61.745 63.158 0.00 0.00 0.00 5.25
336 337 2.447887 CGCTCACTGTTAGGCTGCG 61.448 63.158 0.00 0.00 36.19 5.18
337 338 1.374758 GCTCACTGTTAGGCTGCGT 60.375 57.895 0.00 0.00 0.00 5.24
338 339 0.951040 GCTCACTGTTAGGCTGCGTT 60.951 55.000 0.00 0.00 0.00 4.84
339 340 0.792640 CTCACTGTTAGGCTGCGTTG 59.207 55.000 0.00 0.00 0.00 4.10
340 341 0.602638 TCACTGTTAGGCTGCGTTGG 60.603 55.000 0.00 0.00 0.00 3.77
341 342 0.884704 CACTGTTAGGCTGCGTTGGT 60.885 55.000 0.00 0.00 0.00 3.67
342 343 0.884704 ACTGTTAGGCTGCGTTGGTG 60.885 55.000 0.00 0.00 0.00 4.17
343 344 0.602638 CTGTTAGGCTGCGTTGGTGA 60.603 55.000 0.00 0.00 0.00 4.02
344 345 0.036164 TGTTAGGCTGCGTTGGTGAT 59.964 50.000 0.00 0.00 0.00 3.06
345 346 1.165270 GTTAGGCTGCGTTGGTGATT 58.835 50.000 0.00 0.00 0.00 2.57
346 347 1.539827 GTTAGGCTGCGTTGGTGATTT 59.460 47.619 0.00 0.00 0.00 2.17
347 348 1.904287 TAGGCTGCGTTGGTGATTTT 58.096 45.000 0.00 0.00 0.00 1.82
348 349 1.039856 AGGCTGCGTTGGTGATTTTT 58.960 45.000 0.00 0.00 0.00 1.94
386 387 9.862149 TTTTTACTTCTTTTTCTAGATGGAGGT 57.138 29.630 0.00 0.00 0.00 3.85
387 388 8.848474 TTTACTTCTTTTTCTAGATGGAGGTG 57.152 34.615 0.00 0.00 0.00 4.00
388 389 6.688073 ACTTCTTTTTCTAGATGGAGGTGA 57.312 37.500 0.00 0.00 0.00 4.02
389 390 6.706295 ACTTCTTTTTCTAGATGGAGGTGAG 58.294 40.000 0.00 0.00 0.00 3.51
390 391 5.683876 TCTTTTTCTAGATGGAGGTGAGG 57.316 43.478 0.00 0.00 0.00 3.86
391 392 5.342017 TCTTTTTCTAGATGGAGGTGAGGA 58.658 41.667 0.00 0.00 0.00 3.71
392 393 5.966935 TCTTTTTCTAGATGGAGGTGAGGAT 59.033 40.000 0.00 0.00 0.00 3.24
393 394 6.445139 TCTTTTTCTAGATGGAGGTGAGGATT 59.555 38.462 0.00 0.00 0.00 3.01
394 395 6.642733 TTTTCTAGATGGAGGTGAGGATTT 57.357 37.500 0.00 0.00 0.00 2.17
395 396 6.642733 TTTCTAGATGGAGGTGAGGATTTT 57.357 37.500 0.00 0.00 0.00 1.82
396 397 6.642733 TTCTAGATGGAGGTGAGGATTTTT 57.357 37.500 0.00 0.00 0.00 1.94
425 426 7.602517 AATGTTTTTCTAGATGAAGACGAGG 57.397 36.000 0.00 0.00 35.89 4.63
426 427 6.340962 TGTTTTTCTAGATGAAGACGAGGA 57.659 37.500 0.00 0.00 35.89 3.71
427 428 6.157211 TGTTTTTCTAGATGAAGACGAGGAC 58.843 40.000 0.00 0.00 35.89 3.85
428 429 6.015350 TGTTTTTCTAGATGAAGACGAGGACT 60.015 38.462 0.00 0.00 35.89 3.85
429 430 5.821516 TTTCTAGATGAAGACGAGGACTC 57.178 43.478 0.00 0.00 35.89 3.36
430 431 3.811083 TCTAGATGAAGACGAGGACTCC 58.189 50.000 0.00 0.00 0.00 3.85
431 432 1.384525 AGATGAAGACGAGGACTCCG 58.615 55.000 0.00 0.00 0.00 4.63
432 433 1.096416 GATGAAGACGAGGACTCCGT 58.904 55.000 0.00 0.00 43.56 4.69
458 459 5.973651 TTTTAAATGAAAACATGCGCACA 57.026 30.435 14.90 5.14 31.90 4.57
459 460 5.973651 TTTAAATGAAAACATGCGCACAA 57.026 30.435 14.90 0.00 0.00 3.33
460 461 3.857923 AAATGAAAACATGCGCACAAC 57.142 38.095 14.90 1.80 0.00 3.32
461 462 2.505628 ATGAAAACATGCGCACAACA 57.494 40.000 14.90 8.14 0.00 3.33
462 463 2.505628 TGAAAACATGCGCACAACAT 57.494 40.000 14.90 0.00 0.00 2.71
463 464 2.392821 TGAAAACATGCGCACAACATC 58.607 42.857 14.90 9.92 0.00 3.06
464 465 1.720852 GAAAACATGCGCACAACATCC 59.279 47.619 14.90 0.00 0.00 3.51
465 466 0.961019 AAACATGCGCACAACATCCT 59.039 45.000 14.90 0.00 0.00 3.24
466 467 0.523072 AACATGCGCACAACATCCTC 59.477 50.000 14.90 0.00 0.00 3.71
467 468 0.321919 ACATGCGCACAACATCCTCT 60.322 50.000 14.90 0.00 0.00 3.69
468 469 0.376152 CATGCGCACAACATCCTCTC 59.624 55.000 14.90 0.00 0.00 3.20
469 470 0.036105 ATGCGCACAACATCCTCTCA 60.036 50.000 14.90 0.00 0.00 3.27
470 471 0.250252 TGCGCACAACATCCTCTCAA 60.250 50.000 5.66 0.00 0.00 3.02
471 472 0.445436 GCGCACAACATCCTCTCAAG 59.555 55.000 0.30 0.00 0.00 3.02
472 473 0.445436 CGCACAACATCCTCTCAAGC 59.555 55.000 0.00 0.00 0.00 4.01
473 474 0.445436 GCACAACATCCTCTCAAGCG 59.555 55.000 0.00 0.00 0.00 4.68
474 475 1.081892 CACAACATCCTCTCAAGCGG 58.918 55.000 0.00 0.00 0.00 5.52
475 476 0.674895 ACAACATCCTCTCAAGCGGC 60.675 55.000 0.00 0.00 0.00 6.53
476 477 1.448540 AACATCCTCTCAAGCGGCG 60.449 57.895 0.51 0.51 0.00 6.46
477 478 3.267860 CATCCTCTCAAGCGGCGC 61.268 66.667 26.86 26.86 0.00 6.53
478 479 4.537433 ATCCTCTCAAGCGGCGCC 62.537 66.667 30.40 19.07 0.00 6.53
501 502 4.028490 CAGGCGCCCCAACCACTA 62.028 66.667 26.15 0.00 0.00 2.74
502 503 3.717294 AGGCGCCCCAACCACTAG 61.717 66.667 26.15 0.00 0.00 2.57
503 504 4.029809 GGCGCCCCAACCACTAGT 62.030 66.667 18.11 0.00 0.00 2.57
504 505 2.436115 GCGCCCCAACCACTAGTC 60.436 66.667 0.00 0.00 0.00 2.59
505 506 2.955881 GCGCCCCAACCACTAGTCT 61.956 63.158 0.00 0.00 0.00 3.24
506 507 1.610554 GCGCCCCAACCACTAGTCTA 61.611 60.000 0.00 0.00 0.00 2.59
507 508 0.460311 CGCCCCAACCACTAGTCTAG 59.540 60.000 5.27 5.27 0.00 2.43
508 509 0.178301 GCCCCAACCACTAGTCTAGC 59.822 60.000 6.81 0.00 0.00 3.42
509 510 1.867363 CCCCAACCACTAGTCTAGCT 58.133 55.000 6.81 0.00 0.00 3.32
510 511 1.482593 CCCCAACCACTAGTCTAGCTG 59.517 57.143 6.81 4.94 0.00 4.24
511 512 2.180276 CCCAACCACTAGTCTAGCTGT 58.820 52.381 6.81 1.73 0.00 4.40
512 513 3.362706 CCCAACCACTAGTCTAGCTGTA 58.637 50.000 6.81 0.00 0.00 2.74
513 514 3.961408 CCCAACCACTAGTCTAGCTGTAT 59.039 47.826 6.81 0.00 0.00 2.29
514 515 4.406003 CCCAACCACTAGTCTAGCTGTATT 59.594 45.833 6.81 0.42 0.00 1.89
515 516 5.104900 CCCAACCACTAGTCTAGCTGTATTT 60.105 44.000 6.81 0.00 0.00 1.40
516 517 6.043411 CCAACCACTAGTCTAGCTGTATTTC 58.957 44.000 6.81 0.00 0.00 2.17
517 518 6.127310 CCAACCACTAGTCTAGCTGTATTTCT 60.127 42.308 6.81 0.00 0.00 2.52
518 519 6.702716 ACCACTAGTCTAGCTGTATTTCTC 57.297 41.667 6.81 0.00 0.00 2.87
519 520 5.297278 ACCACTAGTCTAGCTGTATTTCTCG 59.703 44.000 6.81 0.00 0.00 4.04
520 521 5.297278 CCACTAGTCTAGCTGTATTTCTCGT 59.703 44.000 6.81 0.00 0.00 4.18
521 522 6.195868 CACTAGTCTAGCTGTATTTCTCGTG 58.804 44.000 6.81 0.00 0.00 4.35
522 523 4.640789 AGTCTAGCTGTATTTCTCGTGG 57.359 45.455 0.00 0.00 0.00 4.94
523 524 4.270834 AGTCTAGCTGTATTTCTCGTGGA 58.729 43.478 0.00 0.00 0.00 4.02
524 525 4.336993 AGTCTAGCTGTATTTCTCGTGGAG 59.663 45.833 0.00 0.00 0.00 3.86
525 526 4.096682 GTCTAGCTGTATTTCTCGTGGAGT 59.903 45.833 0.00 0.00 0.00 3.85
526 527 3.512033 AGCTGTATTTCTCGTGGAGTC 57.488 47.619 0.00 0.00 0.00 3.36
527 528 2.166664 AGCTGTATTTCTCGTGGAGTCC 59.833 50.000 0.73 0.73 0.00 3.85
528 529 2.166664 GCTGTATTTCTCGTGGAGTCCT 59.833 50.000 11.33 0.00 0.00 3.85
529 530 3.380637 GCTGTATTTCTCGTGGAGTCCTA 59.619 47.826 11.33 0.00 0.00 2.94
530 531 4.498345 GCTGTATTTCTCGTGGAGTCCTAG 60.498 50.000 11.33 5.62 0.00 3.02
531 532 3.952323 TGTATTTCTCGTGGAGTCCTAGG 59.048 47.826 11.33 0.82 0.00 3.02
532 533 2.599408 TTTCTCGTGGAGTCCTAGGT 57.401 50.000 11.33 0.00 0.00 3.08
533 534 1.835494 TTCTCGTGGAGTCCTAGGTG 58.165 55.000 11.33 4.27 0.00 4.00
534 535 0.680280 TCTCGTGGAGTCCTAGGTGC 60.680 60.000 11.33 3.27 0.00 5.01
535 536 0.965866 CTCGTGGAGTCCTAGGTGCA 60.966 60.000 11.33 0.00 0.00 4.57
536 537 0.541063 TCGTGGAGTCCTAGGTGCAA 60.541 55.000 11.33 0.00 0.00 4.08
537 538 0.537188 CGTGGAGTCCTAGGTGCAAT 59.463 55.000 11.33 0.00 0.00 3.56
538 539 1.754803 CGTGGAGTCCTAGGTGCAATA 59.245 52.381 11.33 0.00 0.00 1.90
539 540 2.481449 CGTGGAGTCCTAGGTGCAATAC 60.481 54.545 11.33 0.00 0.00 1.89
540 541 2.766828 GTGGAGTCCTAGGTGCAATACT 59.233 50.000 11.33 3.18 0.00 2.12
541 542 2.766263 TGGAGTCCTAGGTGCAATACTG 59.234 50.000 11.33 0.00 0.00 2.74
559 560 7.813645 CAATACTGCAATGCATCTATGTATGT 58.186 34.615 8.91 2.08 38.13 2.29
560 561 7.991084 ATACTGCAATGCATCTATGTATGTT 57.009 32.000 8.91 0.00 38.13 2.71
561 562 6.704289 ACTGCAATGCATCTATGTATGTTT 57.296 33.333 8.91 0.00 38.13 2.83
562 563 6.732154 ACTGCAATGCATCTATGTATGTTTC 58.268 36.000 8.91 0.00 38.13 2.78
563 564 5.750650 TGCAATGCATCTATGTATGTTTCG 58.249 37.500 2.72 0.00 33.33 3.46
564 565 4.614284 GCAATGCATCTATGTATGTTTCGC 59.386 41.667 0.00 0.00 33.33 4.70
565 566 4.652175 ATGCATCTATGTATGTTTCGCG 57.348 40.909 0.00 0.00 31.77 5.87
566 567 3.453424 TGCATCTATGTATGTTTCGCGT 58.547 40.909 5.77 0.00 0.00 6.01
567 568 3.245048 TGCATCTATGTATGTTTCGCGTG 59.755 43.478 5.77 0.00 0.00 5.34
568 569 3.362986 GCATCTATGTATGTTTCGCGTGG 60.363 47.826 5.77 0.00 0.00 4.94
569 570 3.513680 TCTATGTATGTTTCGCGTGGT 57.486 42.857 5.77 0.00 0.00 4.16
570 571 3.183754 TCTATGTATGTTTCGCGTGGTG 58.816 45.455 5.77 0.00 0.00 4.17
571 572 2.087501 ATGTATGTTTCGCGTGGTGA 57.912 45.000 5.77 0.00 0.00 4.02
572 573 1.141645 TGTATGTTTCGCGTGGTGAC 58.858 50.000 5.77 0.00 0.00 3.67
573 574 0.441145 GTATGTTTCGCGTGGTGACC 59.559 55.000 5.77 0.00 0.00 4.02
574 575 0.033642 TATGTTTCGCGTGGTGACCA 59.966 50.000 5.77 0.00 0.00 4.02
575 576 0.605319 ATGTTTCGCGTGGTGACCAT 60.605 50.000 7.94 0.00 35.28 3.55
576 577 1.206578 GTTTCGCGTGGTGACCATG 59.793 57.895 19.32 19.32 42.95 3.66
584 585 3.878086 CGTGGTGACCATGCATATAAC 57.122 47.619 11.41 0.00 35.28 1.89
585 586 2.548057 CGTGGTGACCATGCATATAACC 59.452 50.000 11.41 4.20 35.28 2.85
586 587 3.744214 CGTGGTGACCATGCATATAACCT 60.744 47.826 11.41 0.00 35.28 3.50
587 588 4.207165 GTGGTGACCATGCATATAACCTT 58.793 43.478 7.94 0.00 35.28 3.50
588 589 4.644685 GTGGTGACCATGCATATAACCTTT 59.355 41.667 7.94 0.00 35.28 3.11
589 590 5.825679 GTGGTGACCATGCATATAACCTTTA 59.174 40.000 7.94 0.00 35.28 1.85
590 591 6.490040 GTGGTGACCATGCATATAACCTTTAT 59.510 38.462 7.94 0.00 35.28 1.40
591 592 6.489700 TGGTGACCATGCATATAACCTTTATG 59.510 38.462 14.93 0.00 0.00 1.90
592 593 6.714810 GGTGACCATGCATATAACCTTTATGA 59.285 38.462 0.00 0.00 30.16 2.15
593 594 7.394359 GGTGACCATGCATATAACCTTTATGAT 59.606 37.037 0.00 0.00 30.16 2.45
594 595 8.454106 GTGACCATGCATATAACCTTTATGATC 58.546 37.037 0.00 0.00 30.16 2.92
595 596 8.162746 TGACCATGCATATAACCTTTATGATCA 58.837 33.333 0.00 0.00 30.16 2.92
596 597 8.571461 ACCATGCATATAACCTTTATGATCAG 57.429 34.615 0.00 0.00 30.16 2.90
597 598 8.166061 ACCATGCATATAACCTTTATGATCAGT 58.834 33.333 0.00 0.00 30.16 3.41
598 599 9.017509 CCATGCATATAACCTTTATGATCAGTT 57.982 33.333 0.00 1.97 30.16 3.16
601 602 9.407380 TGCATATAACCTTTATGATCAGTTTGT 57.593 29.630 0.09 0.00 30.16 2.83
602 603 9.884465 GCATATAACCTTTATGATCAGTTTGTC 57.116 33.333 0.09 0.00 30.16 3.18
608 609 8.511604 ACCTTTATGATCAGTTTGTCTAATGG 57.488 34.615 0.09 7.33 0.00 3.16
609 610 8.328758 ACCTTTATGATCAGTTTGTCTAATGGA 58.671 33.333 16.11 0.00 0.00 3.41
610 611 9.177608 CCTTTATGATCAGTTTGTCTAATGGAA 57.822 33.333 0.09 0.00 0.00 3.53
615 616 9.857656 ATGATCAGTTTGTCTAATGGAATATGT 57.142 29.630 0.09 0.00 0.00 2.29
630 631 7.727578 TGGAATATGTAGTTCTACTCAACCA 57.272 36.000 10.65 10.19 0.00 3.67
631 632 8.319057 TGGAATATGTAGTTCTACTCAACCAT 57.681 34.615 10.65 0.00 0.00 3.55
632 633 8.421784 TGGAATATGTAGTTCTACTCAACCATC 58.578 37.037 10.65 2.21 0.00 3.51
633 634 8.421784 GGAATATGTAGTTCTACTCAACCATCA 58.578 37.037 10.65 0.00 0.00 3.07
634 635 9.988815 GAATATGTAGTTCTACTCAACCATCAT 57.011 33.333 10.65 0.00 0.00 2.45
638 639 7.265673 TGTAGTTCTACTCAACCATCATTAGC 58.734 38.462 10.65 0.00 0.00 3.09
639 640 6.299805 AGTTCTACTCAACCATCATTAGCA 57.700 37.500 0.00 0.00 0.00 3.49
640 641 6.893583 AGTTCTACTCAACCATCATTAGCAT 58.106 36.000 0.00 0.00 0.00 3.79
641 642 6.765036 AGTTCTACTCAACCATCATTAGCATG 59.235 38.462 0.00 0.00 0.00 4.06
642 643 6.239217 TCTACTCAACCATCATTAGCATGT 57.761 37.500 0.00 0.00 0.00 3.21
643 644 6.653020 TCTACTCAACCATCATTAGCATGTT 58.347 36.000 0.00 0.00 0.00 2.71
644 645 7.112122 TCTACTCAACCATCATTAGCATGTTT 58.888 34.615 0.00 0.00 0.00 2.83
645 646 8.264347 TCTACTCAACCATCATTAGCATGTTTA 58.736 33.333 0.00 0.00 0.00 2.01
646 647 7.886629 ACTCAACCATCATTAGCATGTTTAT 57.113 32.000 0.00 0.00 0.00 1.40
647 648 8.297470 ACTCAACCATCATTAGCATGTTTATT 57.703 30.769 0.00 0.00 0.00 1.40
648 649 8.752187 ACTCAACCATCATTAGCATGTTTATTT 58.248 29.630 0.00 0.00 0.00 1.40
649 650 9.241317 CTCAACCATCATTAGCATGTTTATTTC 57.759 33.333 0.00 0.00 0.00 2.17
650 651 8.747471 TCAACCATCATTAGCATGTTTATTTCA 58.253 29.630 0.00 0.00 0.00 2.69
651 652 9.027129 CAACCATCATTAGCATGTTTATTTCAG 57.973 33.333 0.00 0.00 0.00 3.02
652 653 8.297470 ACCATCATTAGCATGTTTATTTCAGT 57.703 30.769 0.00 0.00 0.00 3.41
653 654 8.192774 ACCATCATTAGCATGTTTATTTCAGTG 58.807 33.333 0.00 0.00 0.00 3.66
654 655 8.192774 CCATCATTAGCATGTTTATTTCAGTGT 58.807 33.333 0.00 0.00 0.00 3.55
655 656 9.577110 CATCATTAGCATGTTTATTTCAGTGTT 57.423 29.630 0.00 0.00 0.00 3.32
656 657 8.969121 TCATTAGCATGTTTATTTCAGTGTTG 57.031 30.769 0.00 0.00 0.00 3.33
657 658 8.575589 TCATTAGCATGTTTATTTCAGTGTTGT 58.424 29.630 0.00 0.00 0.00 3.32
658 659 9.195411 CATTAGCATGTTTATTTCAGTGTTGTT 57.805 29.630 0.00 0.00 0.00 2.83
659 660 9.762933 ATTAGCATGTTTATTTCAGTGTTGTTT 57.237 25.926 0.00 0.00 0.00 2.83
662 663 9.593134 AGCATGTTTATTTCAGTGTTGTTTAAA 57.407 25.926 0.00 0.00 0.00 1.52
663 664 9.631639 GCATGTTTATTTCAGTGTTGTTTAAAC 57.368 29.630 11.54 11.54 31.92 2.01
668 669 9.930693 TTTATTTCAGTGTTGTTTAAACTTGGT 57.069 25.926 18.72 0.00 0.00 3.67
672 673 9.930693 TTTCAGTGTTGTTTAAACTTGGTAATT 57.069 25.926 18.72 0.00 0.00 1.40
675 676 8.949953 CAGTGTTGTTTAAACTTGGTAATTACG 58.050 33.333 18.72 0.00 0.00 3.18
676 677 8.676401 AGTGTTGTTTAAACTTGGTAATTACGT 58.324 29.630 18.72 0.00 0.00 3.57
677 678 9.288124 GTGTTGTTTAAACTTGGTAATTACGTT 57.712 29.630 18.72 5.67 0.00 3.99
681 682 9.336171 TGTTTAAACTTGGTAATTACGTTAGGT 57.664 29.630 18.72 2.76 0.00 3.08
712 713 8.601845 AAAACTTGGTAATTATGTTTTCAGCC 57.398 30.769 11.91 0.00 36.49 4.85
713 714 7.539034 AACTTGGTAATTATGTTTTCAGCCT 57.461 32.000 0.00 0.00 0.00 4.58
714 715 7.539034 ACTTGGTAATTATGTTTTCAGCCTT 57.461 32.000 0.00 0.00 0.00 4.35
715 716 7.962441 ACTTGGTAATTATGTTTTCAGCCTTT 58.038 30.769 0.00 0.00 0.00 3.11
716 717 8.088365 ACTTGGTAATTATGTTTTCAGCCTTTC 58.912 33.333 0.00 0.00 0.00 2.62
717 718 6.930731 TGGTAATTATGTTTTCAGCCTTTCC 58.069 36.000 0.00 0.00 0.00 3.13
718 719 6.071051 TGGTAATTATGTTTTCAGCCTTTCCC 60.071 38.462 0.00 0.00 0.00 3.97
719 720 4.718940 ATTATGTTTTCAGCCTTTCCCG 57.281 40.909 0.00 0.00 0.00 5.14
720 721 2.286365 ATGTTTTCAGCCTTTCCCGA 57.714 45.000 0.00 0.00 0.00 5.14
721 722 2.060050 TGTTTTCAGCCTTTCCCGAA 57.940 45.000 0.00 0.00 0.00 4.30
722 723 2.593026 TGTTTTCAGCCTTTCCCGAAT 58.407 42.857 0.00 0.00 0.00 3.34
723 724 2.962421 TGTTTTCAGCCTTTCCCGAATT 59.038 40.909 0.00 0.00 0.00 2.17
724 725 3.243704 TGTTTTCAGCCTTTCCCGAATTG 60.244 43.478 0.00 0.00 0.00 2.32
725 726 0.887933 TTCAGCCTTTCCCGAATTGC 59.112 50.000 0.00 0.00 0.00 3.56
726 727 0.965363 TCAGCCTTTCCCGAATTGCC 60.965 55.000 0.00 0.00 0.00 4.52
727 728 1.682344 AGCCTTTCCCGAATTGCCC 60.682 57.895 0.00 0.00 0.00 5.36
728 729 1.682344 GCCTTTCCCGAATTGCCCT 60.682 57.895 0.00 0.00 0.00 5.19
729 730 1.257750 GCCTTTCCCGAATTGCCCTT 61.258 55.000 0.00 0.00 0.00 3.95
730 731 0.532115 CCTTTCCCGAATTGCCCTTG 59.468 55.000 0.00 0.00 0.00 3.61
731 732 1.256812 CTTTCCCGAATTGCCCTTGT 58.743 50.000 0.00 0.00 0.00 3.16
732 733 1.202348 CTTTCCCGAATTGCCCTTGTC 59.798 52.381 0.00 0.00 0.00 3.18
733 734 0.111446 TTCCCGAATTGCCCTTGTCA 59.889 50.000 0.00 0.00 0.00 3.58
734 735 0.608035 TCCCGAATTGCCCTTGTCAC 60.608 55.000 0.00 0.00 0.00 3.67
735 736 1.501741 CCGAATTGCCCTTGTCACG 59.498 57.895 0.00 0.00 0.00 4.35
736 737 1.234615 CCGAATTGCCCTTGTCACGT 61.235 55.000 0.00 0.00 0.00 4.49
737 738 0.110238 CGAATTGCCCTTGTCACGTG 60.110 55.000 9.94 9.94 0.00 4.49
738 739 0.240945 GAATTGCCCTTGTCACGTGG 59.759 55.000 17.00 0.00 0.00 4.94
739 740 1.178534 AATTGCCCTTGTCACGTGGG 61.179 55.000 17.00 9.83 43.62 4.61
740 741 2.351924 ATTGCCCTTGTCACGTGGGT 62.352 55.000 17.00 0.00 42.77 4.51
741 742 1.697082 TTGCCCTTGTCACGTGGGTA 61.697 55.000 17.00 5.01 42.77 3.69
742 743 1.375523 GCCCTTGTCACGTGGGTAG 60.376 63.158 17.00 9.91 42.77 3.18
743 744 1.295423 CCCTTGTCACGTGGGTAGG 59.705 63.158 17.00 17.71 36.32 3.18
744 745 1.477685 CCCTTGTCACGTGGGTAGGT 61.478 60.000 17.00 0.00 36.32 3.08
745 746 0.320421 CCTTGTCACGTGGGTAGGTG 60.320 60.000 17.00 0.14 42.50 4.00
746 747 0.677288 CTTGTCACGTGGGTAGGTGA 59.323 55.000 17.00 0.00 46.18 4.02
749 750 1.669440 TCACGTGGGTAGGTGAAGC 59.331 57.895 17.00 0.00 45.61 3.86
750 751 1.736645 CACGTGGGTAGGTGAAGCG 60.737 63.158 7.95 0.00 43.52 4.68
751 752 2.813908 CGTGGGTAGGTGAAGCGC 60.814 66.667 0.00 0.00 0.00 5.92
752 753 2.813908 GTGGGTAGGTGAAGCGCG 60.814 66.667 0.00 0.00 0.00 6.86
753 754 4.077184 TGGGTAGGTGAAGCGCGG 62.077 66.667 8.83 0.00 0.00 6.46
754 755 4.078516 GGGTAGGTGAAGCGCGGT 62.079 66.667 4.23 4.23 0.00 5.68
755 756 2.713967 GGGTAGGTGAAGCGCGGTA 61.714 63.158 12.91 0.00 0.00 4.02
756 757 1.216178 GGTAGGTGAAGCGCGGTAA 59.784 57.895 12.91 0.00 0.00 2.85
757 758 0.390209 GGTAGGTGAAGCGCGGTAAA 60.390 55.000 12.91 0.00 0.00 2.01
758 759 1.431496 GTAGGTGAAGCGCGGTAAAA 58.569 50.000 12.91 0.00 0.00 1.52
759 760 1.799994 GTAGGTGAAGCGCGGTAAAAA 59.200 47.619 12.91 0.00 0.00 1.94
781 782 3.771577 AAAGAAGACCTGAATGACCGT 57.228 42.857 0.00 0.00 0.00 4.83
782 783 4.884668 AAAGAAGACCTGAATGACCGTA 57.115 40.909 0.00 0.00 0.00 4.02
783 784 4.457834 AAGAAGACCTGAATGACCGTAG 57.542 45.455 0.00 0.00 0.00 3.51
784 785 3.698289 AGAAGACCTGAATGACCGTAGA 58.302 45.455 0.00 0.00 0.00 2.59
785 786 3.697045 AGAAGACCTGAATGACCGTAGAG 59.303 47.826 0.00 0.00 0.00 2.43
786 787 3.088789 AGACCTGAATGACCGTAGAGT 57.911 47.619 0.00 0.00 0.00 3.24
787 788 4.232188 AGACCTGAATGACCGTAGAGTA 57.768 45.455 0.00 0.00 0.00 2.59
788 789 4.597004 AGACCTGAATGACCGTAGAGTAA 58.403 43.478 0.00 0.00 0.00 2.24
789 790 5.014858 AGACCTGAATGACCGTAGAGTAAA 58.985 41.667 0.00 0.00 0.00 2.01
790 791 5.479375 AGACCTGAATGACCGTAGAGTAAAA 59.521 40.000 0.00 0.00 0.00 1.52
791 792 6.014840 AGACCTGAATGACCGTAGAGTAAAAA 60.015 38.462 0.00 0.00 0.00 1.94
792 793 6.164176 ACCTGAATGACCGTAGAGTAAAAAG 58.836 40.000 0.00 0.00 0.00 2.27
793 794 5.581085 CCTGAATGACCGTAGAGTAAAAAGG 59.419 44.000 0.00 0.00 0.00 3.11
794 795 5.484715 TGAATGACCGTAGAGTAAAAAGGG 58.515 41.667 0.00 0.00 0.00 3.95
795 796 3.323751 TGACCGTAGAGTAAAAAGGGC 57.676 47.619 0.00 0.00 0.00 5.19
796 797 2.633967 TGACCGTAGAGTAAAAAGGGCA 59.366 45.455 0.00 0.00 33.84 5.36
797 798 3.259902 GACCGTAGAGTAAAAAGGGCAG 58.740 50.000 0.00 0.00 0.00 4.85
801 802 3.616560 CGTAGAGTAAAAAGGGCAGAGCA 60.617 47.826 0.00 0.00 0.00 4.26
830 832 2.933287 CCAGGGCCAGGTGTGGTA 60.933 66.667 6.18 0.00 46.96 3.25
993 1006 2.346541 GCAAGAAGCAAGGGAGGGC 61.347 63.158 0.00 0.00 44.79 5.19
994 1007 1.680314 CAAGAAGCAAGGGAGGGCC 60.680 63.158 0.00 0.00 0.00 5.80
1080 1105 1.964223 CTGGCTCATACCCGTGAGTAT 59.036 52.381 5.87 0.00 45.80 2.12
1119 1146 1.657804 TTTCCCCCTTCACTCCTCTC 58.342 55.000 0.00 0.00 0.00 3.20
1154 1181 0.322008 CTTCTTCCCCAGGAGTGTGC 60.322 60.000 0.00 0.00 31.21 4.57
1168 1195 0.606401 GTGTGCTCCTGCCTTGCTTA 60.606 55.000 0.00 0.00 38.71 3.09
1221 1248 1.801178 GGAGTCGAGCTGTTTTTCCTG 59.199 52.381 0.00 0.00 0.00 3.86
1224 1255 2.158957 AGTCGAGCTGTTTTTCCTGTCA 60.159 45.455 0.00 0.00 0.00 3.58
1245 1276 5.466058 GTCATCTGCAAGGTCTGATTGATAG 59.534 44.000 0.00 0.00 0.00 2.08
1251 1344 7.342026 TCTGCAAGGTCTGATTGATAGTAGTAA 59.658 37.037 0.00 0.00 0.00 2.24
1269 1362 7.816640 AGTAGTAATAAATTTGCCATATGCCG 58.183 34.615 0.00 0.00 40.16 5.69
1312 1405 6.576021 CGCACACGAATCAGAAGATAAATAG 58.424 40.000 0.00 0.00 43.93 1.73
1360 1454 4.608890 GCCAAAACATGTGATTTTGCTTCG 60.609 41.667 13.66 4.38 42.94 3.79
1468 1562 3.437741 TCGACAACTATCAAGCGTCACTA 59.562 43.478 0.00 0.00 31.11 2.74
1469 1563 4.083164 TCGACAACTATCAAGCGTCACTAA 60.083 41.667 0.00 0.00 31.11 2.24
1479 1573 4.106197 CAAGCGTCACTAACTAGATCCAC 58.894 47.826 0.00 0.00 0.00 4.02
1518 1612 4.559862 AATGGTTTACTCTAGTGCTGCT 57.440 40.909 0.00 0.00 0.00 4.24
1536 1630 0.746063 CTTCTGGCACAAAACCTGCA 59.254 50.000 0.00 0.00 38.70 4.41
1564 1659 0.175760 TATGCTCCTGTCAGAACCGC 59.824 55.000 0.00 0.00 0.00 5.68
1567 1662 1.882989 GCTCCTGTCAGAACCGCTCT 61.883 60.000 0.00 0.00 33.23 4.09
1599 1697 0.539051 ATGGCTCGACTCTTTCTGGG 59.461 55.000 0.00 0.00 0.00 4.45
1632 1738 2.380064 TTTTGGGCAGATGAGTTGGT 57.620 45.000 0.00 0.00 0.00 3.67
1674 1781 7.437748 AGACAGAGATTGGTAATAGGATTTCG 58.562 38.462 0.00 0.00 0.00 3.46
1687 1794 3.950397 AGGATTTCGGACTTGTATGCAA 58.050 40.909 0.00 0.00 0.00 4.08
1706 1813 6.007936 TGCAACCACATGTATAACTGTTTC 57.992 37.500 0.00 0.00 0.00 2.78
1711 1818 8.349245 CAACCACATGTATAACTGTTTCAAGAA 58.651 33.333 0.00 0.00 0.00 2.52
1728 1839 4.220821 TCAAGAAGCTCTAGATTCCGTTGT 59.779 41.667 4.43 0.00 41.02 3.32
1748 1859 6.183360 CGTTGTCAATCCAATCATATTTCCCA 60.183 38.462 0.00 0.00 0.00 4.37
1749 1860 7.470424 CGTTGTCAATCCAATCATATTTCCCAT 60.470 37.037 0.00 0.00 0.00 4.00
1750 1861 8.859090 GTTGTCAATCCAATCATATTTCCCATA 58.141 33.333 0.00 0.00 0.00 2.74
1829 1940 3.555967 ATCAGTCCTGATCGGGCC 58.444 61.111 16.48 4.19 46.57 5.80
1943 2054 1.078709 TTCAGGAGCTGAATTTCGCG 58.921 50.000 0.00 0.00 44.27 5.87
2007 2118 2.356553 GTCGCCGCAACACCAGTA 60.357 61.111 0.00 0.00 0.00 2.74
2056 2167 2.806244 ACAATTCGTCTTCTTGGAACGG 59.194 45.455 0.00 0.00 0.00 4.44
2063 2174 2.725203 CTTCTTGGAACGGGACCGCA 62.725 60.000 11.21 0.00 44.19 5.69
2227 2338 3.849911 TGATGAATCACGGTGAGTCTTC 58.150 45.455 31.01 31.01 41.56 2.87
2393 2508 1.272781 GCTTGATTCTCTCGACCACG 58.727 55.000 0.00 0.00 41.26 4.94
2495 2610 2.793946 GCATTAGTGCCACCGCTG 59.206 61.111 0.00 0.00 45.76 5.18
2619 2734 1.753073 CCTTGCCAGATGGATCCAAAC 59.247 52.381 20.67 15.80 37.39 2.93
2711 2826 4.446051 GTCGCAAAGCTCTATCATCCTAAC 59.554 45.833 0.00 0.00 0.00 2.34
2714 2829 5.050499 CGCAAAGCTCTATCATCCTAACTTG 60.050 44.000 0.00 0.00 0.00 3.16
2783 2898 1.909700 ATGAGTTTGTCGCCAATGGT 58.090 45.000 0.00 0.00 0.00 3.55
2925 3041 6.267699 TGTCTCTTCCACTCTGAGAAATGTTA 59.732 38.462 12.44 0.00 38.39 2.41
2973 3214 8.970859 AGTAATAACTGATAAAGCATGAAGCT 57.029 30.769 0.00 0.00 45.81 3.74
3000 3241 6.991938 TGTGGTCTAAGCTGCAATTATTTTT 58.008 32.000 1.02 0.00 0.00 1.94
3003 3244 9.586435 GTGGTCTAAGCTGCAATTATTTTTATT 57.414 29.630 1.02 0.00 0.00 1.40
3051 3292 3.573538 TGATGCCTGTTTGCTGTGTTTAT 59.426 39.130 0.00 0.00 0.00 1.40
3073 3317 9.616156 TTTATCCTATTATGGTTGCTCGTTAAA 57.384 29.630 0.00 0.00 0.00 1.52
3086 3330 4.153475 TGCTCGTTAAATGGAACTTGTAGC 59.847 41.667 0.00 0.00 0.00 3.58
3087 3331 4.392138 GCTCGTTAAATGGAACTTGTAGCT 59.608 41.667 0.00 0.00 0.00 3.32
3088 3332 5.671329 GCTCGTTAAATGGAACTTGTAGCTG 60.671 44.000 0.00 0.00 0.00 4.24
3089 3333 5.302360 TCGTTAAATGGAACTTGTAGCTGT 58.698 37.500 0.00 0.00 0.00 4.40
3090 3334 6.457355 TCGTTAAATGGAACTTGTAGCTGTA 58.543 36.000 0.00 0.00 0.00 2.74
3091 3335 6.588756 TCGTTAAATGGAACTTGTAGCTGTAG 59.411 38.462 0.00 0.00 0.00 2.74
3092 3336 6.543736 GTTAAATGGAACTTGTAGCTGTAGC 58.456 40.000 0.00 0.00 42.49 3.58
3093 3337 2.762535 TGGAACTTGTAGCTGTAGCC 57.237 50.000 0.00 0.00 43.38 3.93
3182 3427 9.605275 TGATATATAATTGCATAAGTCAGCTCC 57.395 33.333 0.00 0.00 0.00 4.70
3183 3428 9.605275 GATATATAATTGCATAAGTCAGCTCCA 57.395 33.333 0.00 0.00 0.00 3.86
3195 3440 1.081892 CAGCTCCAGATTCACCGTTG 58.918 55.000 0.00 0.00 0.00 4.10
3293 3541 7.816640 ACAAGCAATATTAATTCTCACGTGTT 58.183 30.769 16.51 4.83 0.00 3.32
3306 3554 4.930405 TCTCACGTGTTGTTTGTGTTCTAA 59.070 37.500 16.51 0.00 35.20 2.10
3308 3556 6.092944 TCTCACGTGTTGTTTGTGTTCTAATT 59.907 34.615 16.51 0.00 35.20 1.40
3314 3562 9.015577 CGTGTTGTTTGTGTTCTAATTAAACAT 57.984 29.630 12.96 0.00 39.90 2.71
3316 3564 9.862371 TGTTGTTTGTGTTCTAATTAAACATGT 57.138 25.926 12.96 0.00 39.90 3.21
3355 3603 0.482446 TTGGCTGTCTTTGTCCCCAT 59.518 50.000 0.00 0.00 0.00 4.00
3357 3605 1.707989 TGGCTGTCTTTGTCCCCATAA 59.292 47.619 0.00 0.00 0.00 1.90
3358 3606 2.311542 TGGCTGTCTTTGTCCCCATAAT 59.688 45.455 0.00 0.00 0.00 1.28
3409 3657 8.585881 AGTACCAATAATGATCGCATACTTACT 58.414 33.333 0.00 0.00 33.44 2.24
3414 3662 2.821546 TGATCGCATACTTACTGGTGC 58.178 47.619 0.00 0.00 0.00 5.01
3421 3669 4.201724 CGCATACTTACTGGTGCTCTTTTC 60.202 45.833 0.00 0.00 35.52 2.29
3422 3670 4.095036 GCATACTTACTGGTGCTCTTTTCC 59.905 45.833 0.00 0.00 34.85 3.13
3423 3671 3.857157 ACTTACTGGTGCTCTTTTCCA 57.143 42.857 0.00 0.00 0.00 3.53
3424 3672 4.164843 ACTTACTGGTGCTCTTTTCCAA 57.835 40.909 0.00 0.00 0.00 3.53
3569 3817 0.727398 GTGGGAAGTAATGCACGAGC 59.273 55.000 0.00 0.00 42.57 5.03
3646 3894 2.072298 GAGCTGACAACAAAGAGCGAT 58.928 47.619 0.00 0.00 0.00 4.58
3692 3940 2.029838 AGAAATCATCAGTGGCCGTC 57.970 50.000 0.00 0.00 0.00 4.79
3694 3942 1.369091 AAATCATCAGTGGCCGTCGC 61.369 55.000 0.00 0.00 0.00 5.19
3803 4051 1.080093 GACCCGCTCATCAACGACA 60.080 57.895 0.00 0.00 0.00 4.35
3892 4140 1.153086 GCGGCCAAGGATGTCTCAT 60.153 57.895 2.24 0.00 0.00 2.90
4038 4286 3.908737 GGTCTAGAAACACCGCTGT 57.091 52.632 0.00 0.00 0.00 4.40
4040 4288 0.790814 GTCTAGAAACACCGCTGTGC 59.209 55.000 8.32 0.00 46.86 4.57
4054 4302 1.392853 GCTGTGCTGTTCTTCTCATCG 59.607 52.381 0.00 0.00 0.00 3.84
4114 4362 0.984230 CCAAGAGCCTCCTGTAACCA 59.016 55.000 0.00 0.00 0.00 3.67
4176 4425 1.954035 AGGGTCCTGGAGGTCTAAAC 58.046 55.000 0.00 0.00 36.34 2.01
4277 4526 3.311106 AGCAAGCAACATGAATTGTTCG 58.689 40.909 0.00 0.00 45.55 3.95
4294 4545 7.575414 ATTGTTCGATGTCTACTCAGTAGAT 57.425 36.000 17.76 2.56 45.21 1.98
4342 4593 0.602638 TGATGTCAGTGGTTCGTGGC 60.603 55.000 0.00 0.00 0.00 5.01
4344 4595 0.884704 ATGTCAGTGGTTCGTGGCAC 60.885 55.000 7.79 7.79 29.31 5.01
4353 4604 0.521735 GTTCGTGGCACATCCTTTCC 59.478 55.000 19.09 0.00 44.52 3.13
4362 4613 3.769300 GGCACATCCTTTCCCAACTTATT 59.231 43.478 0.00 0.00 0.00 1.40
4381 4632 9.726438 AACTTATTGTTGAGCTTCATAGTTACT 57.274 29.630 0.00 0.00 37.52 2.24
4388 4639 9.151471 TGTTGAGCTTCATAGTTACTACAATTC 57.849 33.333 0.00 0.00 0.00 2.17
4394 4645 9.151471 GCTTCATAGTTACTACAATTCAGAACA 57.849 33.333 0.00 0.00 0.00 3.18
4433 4684 5.746990 ATCATTATAGGGCTACACTGGAC 57.253 43.478 0.00 0.00 0.00 4.02
4539 4984 1.405121 CGTACCCTGTTGAAGGTAGGC 60.405 57.143 0.00 0.00 45.78 3.93
4701 5146 2.841988 AGCCGCTCCAGGATCCTC 60.842 66.667 12.69 0.00 0.00 3.71
4788 5233 1.000486 CCTGGAAGAGGAGACCGGA 60.000 63.158 9.46 0.00 46.33 5.14
4797 5242 0.832135 AGGAGACCGGAGTGCAGAAA 60.832 55.000 9.46 0.00 0.00 2.52
4803 5248 0.389817 CCGGAGTGCAGAAATCGTCA 60.390 55.000 0.00 0.00 0.00 4.35
4839 5284 0.616111 TGAGCTTCTCCCACTCCTCC 60.616 60.000 0.00 0.00 0.00 4.30
4894 5369 1.219393 GGGAGCCTGTCTTTCGGAG 59.781 63.158 0.00 0.00 0.00 4.63
4902 5377 0.038526 TGTCTTTCGGAGCTCGGAAC 60.039 55.000 29.94 21.81 39.77 3.62
4903 5378 0.038526 GTCTTTCGGAGCTCGGAACA 60.039 55.000 29.94 19.34 39.77 3.18
4904 5379 0.677288 TCTTTCGGAGCTCGGAACAA 59.323 50.000 29.94 20.09 39.77 2.83
4907 5382 2.758770 TTCGGAGCTCGGAACAACGG 62.759 60.000 27.34 0.00 39.77 4.44
4908 5383 3.119096 GGAGCTCGGAACAACGGC 61.119 66.667 7.83 0.00 0.00 5.68
4910 5385 4.295119 AGCTCGGAACAACGGCGT 62.295 61.111 6.77 6.77 0.00 5.68
4911 5386 3.774702 GCTCGGAACAACGGCGTC 61.775 66.667 15.17 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.897505 TCATATCAAGATCCGGAAGAGCA 59.102 43.478 9.01 0.00 31.44 4.26
3 4 3.305403 GCGTCATATCAAGATCCGGAAGA 60.305 47.826 9.01 4.84 0.00 2.87
4 5 2.989840 GCGTCATATCAAGATCCGGAAG 59.010 50.000 9.01 0.00 0.00 3.46
5 6 2.607038 CGCGTCATATCAAGATCCGGAA 60.607 50.000 9.01 0.00 0.00 4.30
6 7 1.068541 CGCGTCATATCAAGATCCGGA 60.069 52.381 6.61 6.61 0.00 5.14
7 8 1.340658 CGCGTCATATCAAGATCCGG 58.659 55.000 0.00 0.00 0.00 5.14
8 9 1.335964 ACCGCGTCATATCAAGATCCG 60.336 52.381 4.92 0.00 0.00 4.18
9 10 2.440539 ACCGCGTCATATCAAGATCC 57.559 50.000 4.92 0.00 0.00 3.36
10 11 2.731976 GGAACCGCGTCATATCAAGATC 59.268 50.000 4.92 0.00 0.00 2.75
11 12 2.548067 GGGAACCGCGTCATATCAAGAT 60.548 50.000 4.92 0.00 40.86 2.40
12 13 1.202486 GGGAACCGCGTCATATCAAGA 60.202 52.381 4.92 0.00 40.86 3.02
13 14 1.217882 GGGAACCGCGTCATATCAAG 58.782 55.000 4.92 0.00 40.86 3.02
14 15 3.372795 GGGAACCGCGTCATATCAA 57.627 52.632 4.92 0.00 40.86 2.57
27 28 0.596577 GTTGAAGAAAGCGGGGGAAC 59.403 55.000 0.00 0.00 0.00 3.62
28 29 0.887387 CGTTGAAGAAAGCGGGGGAA 60.887 55.000 0.00 0.00 0.00 3.97
29 30 1.302192 CGTTGAAGAAAGCGGGGGA 60.302 57.895 0.00 0.00 0.00 4.81
30 31 1.170290 AACGTTGAAGAAAGCGGGGG 61.170 55.000 0.00 0.00 0.00 5.40
31 32 0.040425 CAACGTTGAAGAAAGCGGGG 60.040 55.000 23.90 0.00 0.00 5.73
32 33 0.660300 GCAACGTTGAAGAAAGCGGG 60.660 55.000 31.62 0.70 0.00 6.13
33 34 0.660300 GGCAACGTTGAAGAAAGCGG 60.660 55.000 31.62 1.26 0.00 5.52
34 35 0.307760 AGGCAACGTTGAAGAAAGCG 59.692 50.000 31.62 2.06 46.39 4.68
35 36 1.660333 CGAGGCAACGTTGAAGAAAGC 60.660 52.381 31.62 13.96 46.39 3.51
36 37 1.069906 CCGAGGCAACGTTGAAGAAAG 60.070 52.381 31.62 15.42 46.39 2.62
37 38 0.941542 CCGAGGCAACGTTGAAGAAA 59.058 50.000 31.62 0.00 46.39 2.52
38 39 0.179067 ACCGAGGCAACGTTGAAGAA 60.179 50.000 31.62 0.00 46.39 2.52
39 40 0.878523 CACCGAGGCAACGTTGAAGA 60.879 55.000 31.62 0.00 46.39 2.87
40 41 1.569493 CACCGAGGCAACGTTGAAG 59.431 57.895 31.62 17.07 46.39 3.02
41 42 2.539338 GCACCGAGGCAACGTTGAA 61.539 57.895 31.62 0.00 46.39 2.69
42 43 2.970324 GCACCGAGGCAACGTTGA 60.970 61.111 31.62 0.00 46.39 3.18
43 44 4.025401 GGCACCGAGGCAACGTTG 62.025 66.667 23.90 23.90 43.51 4.10
50 51 2.496817 CTCTACTGGCACCGAGGC 59.503 66.667 0.00 0.00 44.50 4.70
51 52 1.379977 TCCTCTACTGGCACCGAGG 60.380 63.158 13.18 13.18 43.44 4.63
52 53 0.681564 AGTCCTCTACTGGCACCGAG 60.682 60.000 0.00 0.00 36.93 4.63
53 54 0.622136 TAGTCCTCTACTGGCACCGA 59.378 55.000 0.00 0.00 39.39 4.69
54 55 1.338337 CATAGTCCTCTACTGGCACCG 59.662 57.143 0.00 0.00 39.39 4.94
55 56 1.689273 CCATAGTCCTCTACTGGCACC 59.311 57.143 0.00 0.00 39.39 5.01
56 57 2.101582 CACCATAGTCCTCTACTGGCAC 59.898 54.545 0.00 0.00 39.39 5.01
57 58 2.388735 CACCATAGTCCTCTACTGGCA 58.611 52.381 0.00 0.00 39.39 4.92
58 59 1.689273 CCACCATAGTCCTCTACTGGC 59.311 57.143 0.00 0.00 39.39 4.85
59 60 2.959707 GTCCACCATAGTCCTCTACTGG 59.040 54.545 0.00 0.00 39.39 4.00
60 61 2.619177 CGTCCACCATAGTCCTCTACTG 59.381 54.545 0.00 0.00 39.39 2.74
61 62 2.508716 TCGTCCACCATAGTCCTCTACT 59.491 50.000 0.00 0.00 42.62 2.57
62 63 2.617774 GTCGTCCACCATAGTCCTCTAC 59.382 54.545 0.00 0.00 0.00 2.59
63 64 2.744166 CGTCGTCCACCATAGTCCTCTA 60.744 54.545 0.00 0.00 0.00 2.43
64 65 1.765230 GTCGTCCACCATAGTCCTCT 58.235 55.000 0.00 0.00 0.00 3.69
65 66 0.381089 CGTCGTCCACCATAGTCCTC 59.619 60.000 0.00 0.00 0.00 3.71
66 67 0.323178 ACGTCGTCCACCATAGTCCT 60.323 55.000 0.00 0.00 0.00 3.85
67 68 0.529378 AACGTCGTCCACCATAGTCC 59.471 55.000 0.00 0.00 0.00 3.85
68 69 2.257034 GAAACGTCGTCCACCATAGTC 58.743 52.381 0.00 0.00 0.00 2.59
69 70 1.614903 TGAAACGTCGTCCACCATAGT 59.385 47.619 0.00 0.00 0.00 2.12
70 71 2.259618 CTGAAACGTCGTCCACCATAG 58.740 52.381 0.00 0.00 0.00 2.23
71 72 1.670674 GCTGAAACGTCGTCCACCATA 60.671 52.381 0.00 0.00 0.00 2.74
72 73 0.949105 GCTGAAACGTCGTCCACCAT 60.949 55.000 0.00 0.00 0.00 3.55
73 74 1.593209 GCTGAAACGTCGTCCACCA 60.593 57.895 0.00 0.00 0.00 4.17
74 75 2.654912 CGCTGAAACGTCGTCCACC 61.655 63.158 0.00 0.00 0.00 4.61
75 76 1.947642 ACGCTGAAACGTCGTCCAC 60.948 57.895 0.00 0.00 44.43 4.02
76 77 1.947146 CACGCTGAAACGTCGTCCA 60.947 57.895 0.00 0.00 46.34 4.02
77 78 2.654912 CCACGCTGAAACGTCGTCC 61.655 63.158 0.00 0.00 46.34 4.79
78 79 2.844146 CCACGCTGAAACGTCGTC 59.156 61.111 0.00 0.00 46.34 4.20
79 80 3.335534 GCCACGCTGAAACGTCGT 61.336 61.111 0.00 0.00 46.34 4.34
80 81 2.667318 ATGCCACGCTGAAACGTCG 61.667 57.895 0.00 0.00 46.34 5.12
81 82 1.154413 CATGCCACGCTGAAACGTC 60.154 57.895 0.00 0.00 46.34 4.34
83 84 0.040514 TTTCATGCCACGCTGAAACG 60.041 50.000 0.00 0.00 36.67 3.60
84 85 2.253603 GATTTCATGCCACGCTGAAAC 58.746 47.619 11.01 5.31 42.38 2.78
85 86 1.202114 GGATTTCATGCCACGCTGAAA 59.798 47.619 11.12 11.12 43.37 2.69
86 87 0.810648 GGATTTCATGCCACGCTGAA 59.189 50.000 0.00 0.00 0.00 3.02
87 88 0.035152 AGGATTTCATGCCACGCTGA 60.035 50.000 0.00 0.00 0.00 4.26
88 89 0.813184 AAGGATTTCATGCCACGCTG 59.187 50.000 0.00 0.00 0.00 5.18
89 90 1.549203 AAAGGATTTCATGCCACGCT 58.451 45.000 0.00 0.00 27.08 5.07
113 114 6.043854 TGCTTAATGGGGTTTAATTTCACC 57.956 37.500 0.00 0.00 0.00 4.02
114 115 6.475402 CGATGCTTAATGGGGTTTAATTTCAC 59.525 38.462 0.00 0.00 0.00 3.18
115 116 6.568869 CGATGCTTAATGGGGTTTAATTTCA 58.431 36.000 0.00 0.00 0.00 2.69
116 117 5.462068 GCGATGCTTAATGGGGTTTAATTTC 59.538 40.000 0.00 0.00 0.00 2.17
117 118 5.356426 GCGATGCTTAATGGGGTTTAATTT 58.644 37.500 0.00 0.00 0.00 1.82
118 119 4.499019 CGCGATGCTTAATGGGGTTTAATT 60.499 41.667 0.00 0.00 0.00 1.40
119 120 3.004315 CGCGATGCTTAATGGGGTTTAAT 59.996 43.478 0.00 0.00 0.00 1.40
120 121 2.356382 CGCGATGCTTAATGGGGTTTAA 59.644 45.455 0.00 0.00 0.00 1.52
121 122 1.944024 CGCGATGCTTAATGGGGTTTA 59.056 47.619 0.00 0.00 0.00 2.01
122 123 0.738389 CGCGATGCTTAATGGGGTTT 59.262 50.000 0.00 0.00 0.00 3.27
123 124 0.393808 ACGCGATGCTTAATGGGGTT 60.394 50.000 15.93 0.00 36.91 4.11
124 125 1.095228 CACGCGATGCTTAATGGGGT 61.095 55.000 15.93 0.00 40.16 4.95
125 126 0.813610 TCACGCGATGCTTAATGGGG 60.814 55.000 15.93 0.00 33.77 4.96
126 127 1.003545 CTTCACGCGATGCTTAATGGG 60.004 52.381 15.93 0.00 0.00 4.00
127 128 1.003545 CCTTCACGCGATGCTTAATGG 60.004 52.381 15.93 0.00 0.00 3.16
128 129 1.003545 CCCTTCACGCGATGCTTAATG 60.004 52.381 15.93 0.00 0.00 1.90
129 130 1.299541 CCCTTCACGCGATGCTTAAT 58.700 50.000 15.93 0.00 0.00 1.40
130 131 1.366111 GCCCTTCACGCGATGCTTAA 61.366 55.000 15.93 0.00 0.00 1.85
131 132 1.813753 GCCCTTCACGCGATGCTTA 60.814 57.895 15.93 0.00 0.00 3.09
132 133 3.127533 GCCCTTCACGCGATGCTT 61.128 61.111 15.93 0.00 0.00 3.91
141 142 4.966787 TGGTTGGCCGCCCTTCAC 62.967 66.667 7.03 0.00 37.67 3.18
142 143 4.659172 CTGGTTGGCCGCCCTTCA 62.659 66.667 7.03 1.26 37.67 3.02
146 147 4.506255 ATAGCTGGTTGGCCGCCC 62.506 66.667 7.03 8.51 37.67 6.13
147 148 3.211963 CATAGCTGGTTGGCCGCC 61.212 66.667 1.04 1.04 37.67 6.13
148 149 3.892581 GCATAGCTGGTTGGCCGC 61.893 66.667 0.00 0.00 37.67 6.53
149 150 3.211963 GGCATAGCTGGTTGGCCG 61.212 66.667 0.00 0.00 37.67 6.13
150 151 2.044053 TGGCATAGCTGGTTGGCC 60.044 61.111 14.30 12.70 44.82 5.36
151 152 1.039233 ATGTGGCATAGCTGGTTGGC 61.039 55.000 0.00 4.54 38.77 4.52
152 153 0.742505 CATGTGGCATAGCTGGTTGG 59.257 55.000 0.00 0.00 0.00 3.77
153 154 0.742505 CCATGTGGCATAGCTGGTTG 59.257 55.000 0.00 0.00 0.00 3.77
154 155 3.196040 CCATGTGGCATAGCTGGTT 57.804 52.632 0.00 0.00 0.00 3.67
155 156 4.993307 CCATGTGGCATAGCTGGT 57.007 55.556 0.00 0.00 0.00 4.00
165 166 2.086251 AACCAACTTGCGCCATGTGG 62.086 55.000 4.18 10.43 38.53 4.17
166 167 0.940519 CAACCAACTTGCGCCATGTG 60.941 55.000 4.18 0.00 0.00 3.21
167 168 1.363443 CAACCAACTTGCGCCATGT 59.637 52.632 4.18 0.00 0.00 3.21
168 169 1.373246 CCAACCAACTTGCGCCATG 60.373 57.895 4.18 0.00 0.00 3.66
169 170 3.050339 CCAACCAACTTGCGCCAT 58.950 55.556 4.18 0.00 0.00 4.40
170 171 3.910490 GCCAACCAACTTGCGCCA 61.910 61.111 4.18 0.00 0.00 5.69
171 172 4.662961 GGCCAACCAACTTGCGCC 62.663 66.667 4.18 0.00 38.35 6.53
172 173 4.999939 CGGCCAACCAACTTGCGC 63.000 66.667 2.24 0.00 34.57 6.09
173 174 4.999939 GCGGCCAACCAACTTGCG 63.000 66.667 2.24 0.00 34.57 4.85
174 175 3.846602 CTGCGGCCAACCAACTTGC 62.847 63.158 2.24 0.00 34.57 4.01
175 176 2.336088 CTGCGGCCAACCAACTTG 59.664 61.111 2.24 0.00 34.57 3.16
176 177 2.123897 ACTGCGGCCAACCAACTT 60.124 55.556 2.24 0.00 34.57 2.66
177 178 2.902423 TTCACTGCGGCCAACCAACT 62.902 55.000 2.24 0.00 34.57 3.16
178 179 2.010582 TTTCACTGCGGCCAACCAAC 62.011 55.000 2.24 0.00 34.57 3.77
179 180 1.323271 TTTTCACTGCGGCCAACCAA 61.323 50.000 2.24 0.00 34.57 3.67
180 181 1.323271 TTTTTCACTGCGGCCAACCA 61.323 50.000 2.24 0.00 34.57 3.67
181 182 0.597377 CTTTTTCACTGCGGCCAACC 60.597 55.000 2.24 0.00 0.00 3.77
182 183 1.215014 GCTTTTTCACTGCGGCCAAC 61.215 55.000 2.24 0.00 0.00 3.77
183 184 1.067250 GCTTTTTCACTGCGGCCAA 59.933 52.632 2.24 0.00 0.00 4.52
184 185 1.391157 AAGCTTTTTCACTGCGGCCA 61.391 50.000 2.24 0.00 0.00 5.36
185 186 0.249447 AAAGCTTTTTCACTGCGGCC 60.249 50.000 5.69 0.00 0.00 6.13
186 187 1.258720 CAAAAGCTTTTTCACTGCGGC 59.741 47.619 21.70 0.00 0.00 6.53
187 188 2.791004 CTCAAAAGCTTTTTCACTGCGG 59.209 45.455 21.70 8.33 0.00 5.69
188 189 3.694734 TCTCAAAAGCTTTTTCACTGCG 58.305 40.909 21.70 9.04 0.00 5.18
189 190 7.880059 AATATCTCAAAAGCTTTTTCACTGC 57.120 32.000 21.70 0.00 0.00 4.40
212 213 9.268282 ACTCTCACCTCCATCTAAAAGTAATAA 57.732 33.333 0.00 0.00 0.00 1.40
213 214 8.840200 ACTCTCACCTCCATCTAAAAGTAATA 57.160 34.615 0.00 0.00 0.00 0.98
214 215 7.741554 ACTCTCACCTCCATCTAAAAGTAAT 57.258 36.000 0.00 0.00 0.00 1.89
215 216 7.554959 AACTCTCACCTCCATCTAAAAGTAA 57.445 36.000 0.00 0.00 0.00 2.24
216 217 7.554959 AAACTCTCACCTCCATCTAAAAGTA 57.445 36.000 0.00 0.00 0.00 2.24
217 218 6.441088 AAACTCTCACCTCCATCTAAAAGT 57.559 37.500 0.00 0.00 0.00 2.66
218 219 7.751768 AAAAACTCTCACCTCCATCTAAAAG 57.248 36.000 0.00 0.00 0.00 2.27
252 253 9.142014 TCATCACCTTCATCTAAAAAGGAAAAA 57.858 29.630 8.08 0.00 44.02 1.94
253 254 8.576442 GTCATCACCTTCATCTAAAAAGGAAAA 58.424 33.333 8.08 0.00 44.02 2.29
254 255 7.176690 GGTCATCACCTTCATCTAAAAAGGAAA 59.823 37.037 8.08 0.00 44.02 3.13
255 256 6.659242 GGTCATCACCTTCATCTAAAAAGGAA 59.341 38.462 8.08 0.00 44.02 3.36
256 257 6.180472 GGTCATCACCTTCATCTAAAAAGGA 58.820 40.000 8.08 0.00 44.02 3.36
257 258 6.442513 GGTCATCACCTTCATCTAAAAAGG 57.557 41.667 0.00 0.00 46.21 3.11
314 315 2.391389 GCCTAACAGTGAGCGCCAC 61.391 63.158 17.87 17.87 46.03 5.01
315 316 2.047274 GCCTAACAGTGAGCGCCA 60.047 61.111 2.29 0.00 0.00 5.69
316 317 2.103042 CAGCCTAACAGTGAGCGCC 61.103 63.158 2.29 0.00 0.00 6.53
317 318 2.744768 GCAGCCTAACAGTGAGCGC 61.745 63.158 0.00 0.00 0.00 5.92
318 319 2.447887 CGCAGCCTAACAGTGAGCG 61.448 63.158 0.00 0.00 37.68 5.03
319 320 0.951040 AACGCAGCCTAACAGTGAGC 60.951 55.000 0.00 0.00 0.00 4.26
320 321 0.792640 CAACGCAGCCTAACAGTGAG 59.207 55.000 0.00 0.00 0.00 3.51
321 322 0.602638 CCAACGCAGCCTAACAGTGA 60.603 55.000 0.00 0.00 0.00 3.41
322 323 0.884704 ACCAACGCAGCCTAACAGTG 60.885 55.000 0.00 0.00 0.00 3.66
323 324 0.884704 CACCAACGCAGCCTAACAGT 60.885 55.000 0.00 0.00 0.00 3.55
324 325 0.602638 TCACCAACGCAGCCTAACAG 60.603 55.000 0.00 0.00 0.00 3.16
325 326 0.036164 ATCACCAACGCAGCCTAACA 59.964 50.000 0.00 0.00 0.00 2.41
326 327 1.165270 AATCACCAACGCAGCCTAAC 58.835 50.000 0.00 0.00 0.00 2.34
327 328 1.904287 AAATCACCAACGCAGCCTAA 58.096 45.000 0.00 0.00 0.00 2.69
328 329 1.904287 AAAATCACCAACGCAGCCTA 58.096 45.000 0.00 0.00 0.00 3.93
329 330 1.039856 AAAAATCACCAACGCAGCCT 58.960 45.000 0.00 0.00 0.00 4.58
330 331 3.586430 AAAAATCACCAACGCAGCC 57.414 47.368 0.00 0.00 0.00 4.85
360 361 9.862149 ACCTCCATCTAGAAAAAGAAGTAAAAA 57.138 29.630 0.00 0.00 0.00 1.94
361 362 9.284968 CACCTCCATCTAGAAAAAGAAGTAAAA 57.715 33.333 0.00 0.00 0.00 1.52
362 363 8.656806 TCACCTCCATCTAGAAAAAGAAGTAAA 58.343 33.333 0.00 0.00 0.00 2.01
363 364 8.202461 TCACCTCCATCTAGAAAAAGAAGTAA 57.798 34.615 0.00 0.00 0.00 2.24
364 365 7.093289 CCTCACCTCCATCTAGAAAAAGAAGTA 60.093 40.741 0.00 0.00 0.00 2.24
365 366 6.296145 CCTCACCTCCATCTAGAAAAAGAAGT 60.296 42.308 0.00 0.00 0.00 3.01
366 367 6.070538 TCCTCACCTCCATCTAGAAAAAGAAG 60.071 42.308 0.00 0.00 0.00 2.85
367 368 5.785423 TCCTCACCTCCATCTAGAAAAAGAA 59.215 40.000 0.00 0.00 0.00 2.52
368 369 5.342017 TCCTCACCTCCATCTAGAAAAAGA 58.658 41.667 0.00 0.00 0.00 2.52
369 370 5.683876 TCCTCACCTCCATCTAGAAAAAG 57.316 43.478 0.00 0.00 0.00 2.27
370 371 6.642733 AATCCTCACCTCCATCTAGAAAAA 57.357 37.500 0.00 0.00 0.00 1.94
371 372 6.642733 AAATCCTCACCTCCATCTAGAAAA 57.357 37.500 0.00 0.00 0.00 2.29
372 373 6.642733 AAAATCCTCACCTCCATCTAGAAA 57.357 37.500 0.00 0.00 0.00 2.52
373 374 6.642733 AAAAATCCTCACCTCCATCTAGAA 57.357 37.500 0.00 0.00 0.00 2.10
399 400 8.507249 CCTCGTCTTCATCTAGAAAAACATTTT 58.493 33.333 0.00 0.00 35.40 1.82
400 401 7.878127 TCCTCGTCTTCATCTAGAAAAACATTT 59.122 33.333 0.00 0.00 35.40 2.32
401 402 7.332182 GTCCTCGTCTTCATCTAGAAAAACATT 59.668 37.037 0.00 0.00 35.40 2.71
402 403 6.814146 GTCCTCGTCTTCATCTAGAAAAACAT 59.186 38.462 0.00 0.00 35.40 2.71
403 404 6.015350 AGTCCTCGTCTTCATCTAGAAAAACA 60.015 38.462 0.00 0.00 35.40 2.83
404 405 6.391537 AGTCCTCGTCTTCATCTAGAAAAAC 58.608 40.000 0.00 0.00 35.40 2.43
405 406 6.350277 GGAGTCCTCGTCTTCATCTAGAAAAA 60.350 42.308 0.41 0.00 35.40 1.94
406 407 5.125739 GGAGTCCTCGTCTTCATCTAGAAAA 59.874 44.000 0.41 0.00 35.40 2.29
407 408 4.641094 GGAGTCCTCGTCTTCATCTAGAAA 59.359 45.833 0.41 0.00 35.40 2.52
408 409 4.200874 GGAGTCCTCGTCTTCATCTAGAA 58.799 47.826 0.41 0.00 34.41 2.10
409 410 3.741700 CGGAGTCCTCGTCTTCATCTAGA 60.742 52.174 7.77 0.00 0.00 2.43
410 411 2.546368 CGGAGTCCTCGTCTTCATCTAG 59.454 54.545 7.77 0.00 0.00 2.43
411 412 2.093075 ACGGAGTCCTCGTCTTCATCTA 60.093 50.000 7.77 0.00 29.74 1.98
412 413 1.340211 ACGGAGTCCTCGTCTTCATCT 60.340 52.381 7.77 0.00 29.74 2.90
413 414 1.096416 ACGGAGTCCTCGTCTTCATC 58.904 55.000 7.77 0.00 29.74 2.92
414 415 3.267908 ACGGAGTCCTCGTCTTCAT 57.732 52.632 7.77 0.00 29.74 2.57
415 416 4.815489 ACGGAGTCCTCGTCTTCA 57.185 55.556 7.77 0.00 29.74 3.02
435 436 6.349973 TGTGCGCATGTTTTCATTTAAAAA 57.650 29.167 15.91 0.00 38.76 1.94
436 437 5.973651 TGTGCGCATGTTTTCATTTAAAA 57.026 30.435 15.91 0.00 38.64 1.52
437 438 5.291858 TGTTGTGCGCATGTTTTCATTTAAA 59.708 32.000 15.91 0.00 38.64 1.52
438 439 4.805719 TGTTGTGCGCATGTTTTCATTTAA 59.194 33.333 15.91 0.00 38.64 1.52
439 440 4.363138 TGTTGTGCGCATGTTTTCATTTA 58.637 34.783 15.91 0.00 38.64 1.40
440 441 3.193263 TGTTGTGCGCATGTTTTCATTT 58.807 36.364 15.91 0.00 38.64 2.32
441 442 2.819115 TGTTGTGCGCATGTTTTCATT 58.181 38.095 15.91 0.00 38.64 2.57
442 443 2.505628 TGTTGTGCGCATGTTTTCAT 57.494 40.000 15.91 0.00 41.78 2.57
443 444 2.392821 GATGTTGTGCGCATGTTTTCA 58.607 42.857 15.91 1.77 0.00 2.69
444 445 1.720852 GGATGTTGTGCGCATGTTTTC 59.279 47.619 15.91 8.72 0.00 2.29
445 446 1.340889 AGGATGTTGTGCGCATGTTTT 59.659 42.857 15.91 0.00 0.00 2.43
446 447 0.961019 AGGATGTTGTGCGCATGTTT 59.039 45.000 15.91 0.00 0.00 2.83
447 448 0.523072 GAGGATGTTGTGCGCATGTT 59.477 50.000 15.91 0.00 0.00 2.71
448 449 0.321919 AGAGGATGTTGTGCGCATGT 60.322 50.000 15.91 0.00 0.00 3.21
449 450 0.376152 GAGAGGATGTTGTGCGCATG 59.624 55.000 15.91 0.00 0.00 4.06
450 451 0.036105 TGAGAGGATGTTGTGCGCAT 60.036 50.000 15.91 0.00 0.00 4.73
451 452 0.250252 TTGAGAGGATGTTGTGCGCA 60.250 50.000 5.66 5.66 0.00 6.09
452 453 0.445436 CTTGAGAGGATGTTGTGCGC 59.555 55.000 0.00 0.00 0.00 6.09
453 454 0.445436 GCTTGAGAGGATGTTGTGCG 59.555 55.000 0.00 0.00 0.00 5.34
454 455 0.445436 CGCTTGAGAGGATGTTGTGC 59.555 55.000 0.00 0.00 0.00 4.57
455 456 1.081892 CCGCTTGAGAGGATGTTGTG 58.918 55.000 0.00 0.00 37.14 3.33
456 457 0.674895 GCCGCTTGAGAGGATGTTGT 60.675 55.000 4.87 0.00 37.14 3.32
457 458 1.699656 CGCCGCTTGAGAGGATGTTG 61.700 60.000 4.87 0.00 37.14 3.33
458 459 1.448540 CGCCGCTTGAGAGGATGTT 60.449 57.895 4.87 0.00 37.14 2.71
459 460 2.185350 CGCCGCTTGAGAGGATGT 59.815 61.111 4.87 0.00 37.14 3.06
460 461 3.267860 GCGCCGCTTGAGAGGATG 61.268 66.667 0.00 0.00 37.14 3.51
461 462 4.537433 GGCGCCGCTTGAGAGGAT 62.537 66.667 12.58 0.00 37.14 3.24
484 485 3.976701 CTAGTGGTTGGGGCGCCTG 62.977 68.421 28.56 0.10 0.00 4.85
485 486 3.717294 CTAGTGGTTGGGGCGCCT 61.717 66.667 28.56 6.02 0.00 5.52
486 487 3.971109 GACTAGTGGTTGGGGCGCC 62.971 68.421 21.18 21.18 0.00 6.53
487 488 1.610554 TAGACTAGTGGTTGGGGCGC 61.611 60.000 0.00 0.00 0.00 6.53
488 489 0.460311 CTAGACTAGTGGTTGGGGCG 59.540 60.000 0.00 0.00 0.00 6.13
489 490 0.178301 GCTAGACTAGTGGTTGGGGC 59.822 60.000 11.15 0.00 0.00 5.80
490 491 1.482593 CAGCTAGACTAGTGGTTGGGG 59.517 57.143 11.15 0.00 0.00 4.96
491 492 2.180276 ACAGCTAGACTAGTGGTTGGG 58.820 52.381 11.15 0.00 0.00 4.12
492 493 5.599999 AATACAGCTAGACTAGTGGTTGG 57.400 43.478 11.15 0.00 0.00 3.77
493 494 6.868622 AGAAATACAGCTAGACTAGTGGTTG 58.131 40.000 11.15 1.33 0.00 3.77
494 495 6.183360 CGAGAAATACAGCTAGACTAGTGGTT 60.183 42.308 11.15 5.63 0.00 3.67
495 496 5.297278 CGAGAAATACAGCTAGACTAGTGGT 59.703 44.000 11.15 11.25 0.00 4.16
496 497 5.297278 ACGAGAAATACAGCTAGACTAGTGG 59.703 44.000 11.15 6.24 0.00 4.00
497 498 6.195868 CACGAGAAATACAGCTAGACTAGTG 58.804 44.000 11.15 10.06 0.00 2.74
498 499 5.297278 CCACGAGAAATACAGCTAGACTAGT 59.703 44.000 11.15 0.00 0.00 2.57
499 500 5.527951 TCCACGAGAAATACAGCTAGACTAG 59.472 44.000 5.03 5.03 0.00 2.57
500 501 5.434408 TCCACGAGAAATACAGCTAGACTA 58.566 41.667 0.00 0.00 0.00 2.59
501 502 4.270834 TCCACGAGAAATACAGCTAGACT 58.729 43.478 0.00 0.00 0.00 3.24
502 503 4.096682 ACTCCACGAGAAATACAGCTAGAC 59.903 45.833 0.00 0.00 33.32 2.59
503 504 4.270834 ACTCCACGAGAAATACAGCTAGA 58.729 43.478 0.00 0.00 33.32 2.43
504 505 4.498345 GGACTCCACGAGAAATACAGCTAG 60.498 50.000 0.00 0.00 33.32 3.42
505 506 3.380637 GGACTCCACGAGAAATACAGCTA 59.619 47.826 0.00 0.00 33.32 3.32
506 507 2.166664 GGACTCCACGAGAAATACAGCT 59.833 50.000 0.00 0.00 33.32 4.24
507 508 2.166664 AGGACTCCACGAGAAATACAGC 59.833 50.000 0.00 0.00 33.32 4.40
508 509 4.036971 CCTAGGACTCCACGAGAAATACAG 59.963 50.000 1.05 0.00 33.32 2.74
509 510 3.952323 CCTAGGACTCCACGAGAAATACA 59.048 47.826 1.05 0.00 33.32 2.29
510 511 3.952967 ACCTAGGACTCCACGAGAAATAC 59.047 47.826 17.98 0.00 33.32 1.89
511 512 3.952323 CACCTAGGACTCCACGAGAAATA 59.048 47.826 17.98 0.00 33.32 1.40
512 513 2.761208 CACCTAGGACTCCACGAGAAAT 59.239 50.000 17.98 0.00 33.32 2.17
513 514 2.168496 CACCTAGGACTCCACGAGAAA 58.832 52.381 17.98 0.00 33.32 2.52
514 515 1.835494 CACCTAGGACTCCACGAGAA 58.165 55.000 17.98 0.00 33.32 2.87
515 516 0.680280 GCACCTAGGACTCCACGAGA 60.680 60.000 17.98 0.00 33.32 4.04
516 517 0.965866 TGCACCTAGGACTCCACGAG 60.966 60.000 17.98 0.00 35.52 4.18
517 518 0.541063 TTGCACCTAGGACTCCACGA 60.541 55.000 17.98 0.00 0.00 4.35
518 519 0.537188 ATTGCACCTAGGACTCCACG 59.463 55.000 17.98 0.00 0.00 4.94
519 520 2.766828 AGTATTGCACCTAGGACTCCAC 59.233 50.000 17.98 5.96 0.00 4.02
520 521 2.766263 CAGTATTGCACCTAGGACTCCA 59.234 50.000 17.98 3.55 0.00 3.86
521 522 3.460857 CAGTATTGCACCTAGGACTCC 57.539 52.381 17.98 0.70 0.00 3.85
534 535 7.813645 ACATACATAGATGCATTGCAGTATTG 58.186 34.615 17.52 13.57 43.65 1.90
535 536 7.991084 ACATACATAGATGCATTGCAGTATT 57.009 32.000 17.52 0.00 43.65 1.89
536 537 7.991084 AACATACATAGATGCATTGCAGTAT 57.009 32.000 17.52 14.44 43.65 2.12
537 538 7.307337 CGAAACATACATAGATGCATTGCAGTA 60.307 37.037 17.52 12.87 43.65 2.74
538 539 6.512253 CGAAACATACATAGATGCATTGCAGT 60.512 38.462 17.52 11.10 43.65 4.40
539 540 5.849604 CGAAACATACATAGATGCATTGCAG 59.150 40.000 17.52 5.42 43.65 4.41
540 541 5.750650 CGAAACATACATAGATGCATTGCA 58.249 37.500 14.72 14.72 44.86 4.08
541 542 4.614284 GCGAAACATACATAGATGCATTGC 59.386 41.667 0.00 0.46 0.00 3.56
542 543 4.842376 CGCGAAACATACATAGATGCATTG 59.158 41.667 0.00 0.00 0.00 2.82
543 544 4.511454 ACGCGAAACATACATAGATGCATT 59.489 37.500 15.93 0.00 0.00 3.56
544 545 4.058124 ACGCGAAACATACATAGATGCAT 58.942 39.130 15.93 0.00 0.00 3.96
545 546 3.245048 CACGCGAAACATACATAGATGCA 59.755 43.478 15.93 0.00 0.00 3.96
546 547 3.362986 CCACGCGAAACATACATAGATGC 60.363 47.826 15.93 0.00 0.00 3.91
547 548 3.802139 ACCACGCGAAACATACATAGATG 59.198 43.478 15.93 0.00 0.00 2.90
548 549 3.802139 CACCACGCGAAACATACATAGAT 59.198 43.478 15.93 0.00 0.00 1.98
549 550 3.119424 TCACCACGCGAAACATACATAGA 60.119 43.478 15.93 0.00 0.00 1.98
550 551 3.000078 GTCACCACGCGAAACATACATAG 60.000 47.826 15.93 0.00 0.00 2.23
551 552 2.924926 GTCACCACGCGAAACATACATA 59.075 45.455 15.93 0.00 0.00 2.29
552 553 1.730064 GTCACCACGCGAAACATACAT 59.270 47.619 15.93 0.00 0.00 2.29
553 554 1.141645 GTCACCACGCGAAACATACA 58.858 50.000 15.93 0.00 0.00 2.29
554 555 0.441145 GGTCACCACGCGAAACATAC 59.559 55.000 15.93 3.24 0.00 2.39
555 556 0.033642 TGGTCACCACGCGAAACATA 59.966 50.000 15.93 0.00 0.00 2.29
556 557 0.605319 ATGGTCACCACGCGAAACAT 60.605 50.000 15.93 3.94 35.80 2.71
557 558 1.227704 ATGGTCACCACGCGAAACA 60.228 52.632 15.93 1.30 35.80 2.83
558 559 1.206578 CATGGTCACCACGCGAAAC 59.793 57.895 15.93 2.65 35.80 2.78
559 560 2.612567 GCATGGTCACCACGCGAAA 61.613 57.895 15.93 0.00 31.75 3.46
560 561 3.047280 GCATGGTCACCACGCGAA 61.047 61.111 15.93 0.00 31.75 4.70
561 562 2.232298 TATGCATGGTCACCACGCGA 62.232 55.000 15.93 0.00 46.49 5.87
562 563 1.159713 ATATGCATGGTCACCACGCG 61.160 55.000 10.93 3.53 46.49 6.01
563 564 1.877637 TATATGCATGGTCACCACGC 58.122 50.000 8.29 8.29 43.57 5.34
564 565 2.548057 GGTTATATGCATGGTCACCACG 59.452 50.000 10.16 0.00 35.80 4.94
565 566 3.820557 AGGTTATATGCATGGTCACCAC 58.179 45.455 10.16 0.00 35.80 4.16
566 567 4.518278 AAGGTTATATGCATGGTCACCA 57.482 40.909 10.16 0.00 38.19 4.17
567 568 6.714810 TCATAAAGGTTATATGCATGGTCACC 59.285 38.462 10.16 10.00 32.07 4.02
568 569 7.744087 TCATAAAGGTTATATGCATGGTCAC 57.256 36.000 10.16 0.49 32.07 3.67
569 570 8.162746 TGATCATAAAGGTTATATGCATGGTCA 58.837 33.333 10.16 0.00 32.07 4.02
570 571 8.565896 TGATCATAAAGGTTATATGCATGGTC 57.434 34.615 10.16 0.00 32.07 4.02
571 572 8.166061 ACTGATCATAAAGGTTATATGCATGGT 58.834 33.333 10.16 0.04 32.07 3.55
572 573 8.571461 ACTGATCATAAAGGTTATATGCATGG 57.429 34.615 10.16 0.00 32.07 3.66
575 576 9.407380 ACAAACTGATCATAAAGGTTATATGCA 57.593 29.630 0.00 0.00 32.07 3.96
576 577 9.884465 GACAAACTGATCATAAAGGTTATATGC 57.116 33.333 0.00 0.00 32.07 3.14
582 583 8.960591 CCATTAGACAAACTGATCATAAAGGTT 58.039 33.333 0.00 0.00 0.00 3.50
583 584 8.328758 TCCATTAGACAAACTGATCATAAAGGT 58.671 33.333 0.00 0.00 0.00 3.50
584 585 8.737168 TCCATTAGACAAACTGATCATAAAGG 57.263 34.615 0.00 0.00 0.00 3.11
589 590 9.857656 ACATATTCCATTAGACAAACTGATCAT 57.142 29.630 0.00 0.00 0.00 2.45
604 605 8.768397 TGGTTGAGTAGAACTACATATTCCATT 58.232 33.333 13.34 0.00 38.48 3.16
605 606 8.319057 TGGTTGAGTAGAACTACATATTCCAT 57.681 34.615 13.34 0.00 38.48 3.41
606 607 7.727578 TGGTTGAGTAGAACTACATATTCCA 57.272 36.000 13.34 11.18 38.48 3.53
607 608 8.421784 TGATGGTTGAGTAGAACTACATATTCC 58.578 37.037 13.34 9.30 38.48 3.01
608 609 9.988815 ATGATGGTTGAGTAGAACTACATATTC 57.011 33.333 13.34 4.07 38.48 1.75
612 613 7.928706 GCTAATGATGGTTGAGTAGAACTACAT 59.071 37.037 13.34 0.00 38.48 2.29
613 614 7.093509 TGCTAATGATGGTTGAGTAGAACTACA 60.094 37.037 13.34 0.00 38.48 2.74
614 615 7.265673 TGCTAATGATGGTTGAGTAGAACTAC 58.734 38.462 4.05 4.05 36.35 2.73
615 616 7.418337 TGCTAATGATGGTTGAGTAGAACTA 57.582 36.000 0.00 0.00 0.00 2.24
616 617 6.299805 TGCTAATGATGGTTGAGTAGAACT 57.700 37.500 0.00 0.00 0.00 3.01
617 618 6.540189 ACATGCTAATGATGGTTGAGTAGAAC 59.460 38.462 0.00 0.00 37.24 3.01
618 619 6.653020 ACATGCTAATGATGGTTGAGTAGAA 58.347 36.000 0.00 0.00 37.24 2.10
619 620 6.239217 ACATGCTAATGATGGTTGAGTAGA 57.761 37.500 0.00 0.00 37.24 2.59
620 621 6.932356 AACATGCTAATGATGGTTGAGTAG 57.068 37.500 0.00 0.00 37.24 2.57
621 622 8.978874 ATAAACATGCTAATGATGGTTGAGTA 57.021 30.769 0.00 0.00 37.24 2.59
622 623 7.886629 ATAAACATGCTAATGATGGTTGAGT 57.113 32.000 0.00 0.00 37.24 3.41
623 624 9.241317 GAAATAAACATGCTAATGATGGTTGAG 57.759 33.333 0.00 0.00 37.24 3.02
624 625 8.747471 TGAAATAAACATGCTAATGATGGTTGA 58.253 29.630 0.00 0.00 37.24 3.18
625 626 8.929827 TGAAATAAACATGCTAATGATGGTTG 57.070 30.769 0.00 0.00 37.24 3.77
626 627 8.752187 ACTGAAATAAACATGCTAATGATGGTT 58.248 29.630 0.00 0.00 37.24 3.67
627 628 8.192774 CACTGAAATAAACATGCTAATGATGGT 58.807 33.333 0.00 0.00 37.24 3.55
628 629 8.192774 ACACTGAAATAAACATGCTAATGATGG 58.807 33.333 0.00 0.00 37.24 3.51
629 630 9.577110 AACACTGAAATAAACATGCTAATGATG 57.423 29.630 0.00 0.00 37.24 3.07
630 631 9.577110 CAACACTGAAATAAACATGCTAATGAT 57.423 29.630 0.00 0.00 37.24 2.45
631 632 8.575589 ACAACACTGAAATAAACATGCTAATGA 58.424 29.630 0.00 0.00 37.24 2.57
632 633 8.746922 ACAACACTGAAATAAACATGCTAATG 57.253 30.769 0.00 0.00 39.89 1.90
633 634 9.762933 AAACAACACTGAAATAAACATGCTAAT 57.237 25.926 0.00 0.00 0.00 1.73
636 637 9.593134 TTTAAACAACACTGAAATAAACATGCT 57.407 25.926 0.00 0.00 0.00 3.79
637 638 9.631639 GTTTAAACAACACTGAAATAAACATGC 57.368 29.630 13.51 0.00 33.56 4.06
642 643 9.930693 ACCAAGTTTAAACAACACTGAAATAAA 57.069 25.926 20.06 0.00 0.00 1.40
646 647 9.930693 AATTACCAAGTTTAAACAACACTGAAA 57.069 25.926 20.06 4.85 0.00 2.69
649 650 8.949953 CGTAATTACCAAGTTTAAACAACACTG 58.050 33.333 20.06 8.72 0.00 3.66
650 651 8.676401 ACGTAATTACCAAGTTTAAACAACACT 58.324 29.630 20.06 0.00 0.00 3.55
651 652 8.839947 ACGTAATTACCAAGTTTAAACAACAC 57.160 30.769 20.06 6.51 0.00 3.32
655 656 9.336171 ACCTAACGTAATTACCAAGTTTAAACA 57.664 29.630 20.06 0.00 0.00 2.83
686 687 9.051679 GGCTGAAAACATAATTACCAAGTTTTT 57.948 29.630 15.23 5.12 41.04 1.94
687 688 8.428852 AGGCTGAAAACATAATTACCAAGTTTT 58.571 29.630 14.53 14.53 42.91 2.43
688 689 7.962441 AGGCTGAAAACATAATTACCAAGTTT 58.038 30.769 0.00 0.00 34.19 2.66
689 690 7.539034 AGGCTGAAAACATAATTACCAAGTT 57.461 32.000 0.00 0.00 0.00 2.66
690 691 7.539034 AAGGCTGAAAACATAATTACCAAGT 57.461 32.000 0.00 0.00 0.00 3.16
691 692 7.545615 GGAAAGGCTGAAAACATAATTACCAAG 59.454 37.037 0.00 0.00 0.00 3.61
692 693 7.382898 GGAAAGGCTGAAAACATAATTACCAA 58.617 34.615 0.00 0.00 0.00 3.67
693 694 6.071051 GGGAAAGGCTGAAAACATAATTACCA 60.071 38.462 0.00 0.00 0.00 3.25
694 695 6.338146 GGGAAAGGCTGAAAACATAATTACC 58.662 40.000 0.00 0.00 0.00 2.85
695 696 6.033966 CGGGAAAGGCTGAAAACATAATTAC 58.966 40.000 0.00 0.00 0.00 1.89
696 697 5.946972 TCGGGAAAGGCTGAAAACATAATTA 59.053 36.000 0.00 0.00 0.00 1.40
697 698 4.770010 TCGGGAAAGGCTGAAAACATAATT 59.230 37.500 0.00 0.00 0.00 1.40
698 699 4.340617 TCGGGAAAGGCTGAAAACATAAT 58.659 39.130 0.00 0.00 0.00 1.28
699 700 3.757270 TCGGGAAAGGCTGAAAACATAA 58.243 40.909 0.00 0.00 0.00 1.90
700 701 3.426787 TCGGGAAAGGCTGAAAACATA 57.573 42.857 0.00 0.00 0.00 2.29
701 702 2.286365 TCGGGAAAGGCTGAAAACAT 57.714 45.000 0.00 0.00 0.00 2.71
702 703 2.060050 TTCGGGAAAGGCTGAAAACA 57.940 45.000 0.00 0.00 0.00 2.83
703 704 3.317150 CAATTCGGGAAAGGCTGAAAAC 58.683 45.455 0.00 0.00 0.00 2.43
704 705 2.288763 GCAATTCGGGAAAGGCTGAAAA 60.289 45.455 0.00 0.00 0.00 2.29
705 706 1.272212 GCAATTCGGGAAAGGCTGAAA 59.728 47.619 0.00 0.00 0.00 2.69
706 707 0.887933 GCAATTCGGGAAAGGCTGAA 59.112 50.000 0.00 0.00 0.00 3.02
707 708 0.965363 GGCAATTCGGGAAAGGCTGA 60.965 55.000 0.00 0.00 0.00 4.26
708 709 1.512694 GGCAATTCGGGAAAGGCTG 59.487 57.895 0.00 0.00 0.00 4.85
709 710 1.682344 GGGCAATTCGGGAAAGGCT 60.682 57.895 9.47 0.00 0.00 4.58
710 711 1.257750 AAGGGCAATTCGGGAAAGGC 61.258 55.000 0.00 3.30 0.00 4.35
711 712 0.532115 CAAGGGCAATTCGGGAAAGG 59.468 55.000 0.00 0.00 0.00 3.11
712 713 1.202348 GACAAGGGCAATTCGGGAAAG 59.798 52.381 0.00 0.00 0.00 2.62
713 714 1.253100 GACAAGGGCAATTCGGGAAA 58.747 50.000 0.00 0.00 0.00 3.13
714 715 0.111446 TGACAAGGGCAATTCGGGAA 59.889 50.000 0.00 0.00 0.00 3.97
715 716 0.608035 GTGACAAGGGCAATTCGGGA 60.608 55.000 0.00 0.00 0.00 5.14
716 717 1.883021 GTGACAAGGGCAATTCGGG 59.117 57.895 0.00 0.00 0.00 5.14
717 718 1.234615 ACGTGACAAGGGCAATTCGG 61.235 55.000 0.00 0.00 0.00 4.30
718 719 0.110238 CACGTGACAAGGGCAATTCG 60.110 55.000 10.90 0.00 0.00 3.34
719 720 0.240945 CCACGTGACAAGGGCAATTC 59.759 55.000 19.30 0.00 0.00 2.17
720 721 1.178534 CCCACGTGACAAGGGCAATT 61.179 55.000 19.30 0.00 35.44 2.32
721 722 1.603455 CCCACGTGACAAGGGCAAT 60.603 57.895 19.30 0.00 35.44 3.56
722 723 1.697082 TACCCACGTGACAAGGGCAA 61.697 55.000 19.30 0.00 46.88 4.52
723 724 2.107041 CTACCCACGTGACAAGGGCA 62.107 60.000 19.30 0.00 46.88 5.36
724 725 1.375523 CTACCCACGTGACAAGGGC 60.376 63.158 19.30 0.00 46.88 5.19
726 727 0.320421 CACCTACCCACGTGACAAGG 60.320 60.000 19.30 20.59 31.36 3.61
727 728 0.677288 TCACCTACCCACGTGACAAG 59.323 55.000 19.30 10.38 34.14 3.16
728 729 1.069513 CTTCACCTACCCACGTGACAA 59.930 52.381 19.30 0.00 38.68 3.18
729 730 0.677288 CTTCACCTACCCACGTGACA 59.323 55.000 19.30 0.00 38.68 3.58
730 731 0.669625 GCTTCACCTACCCACGTGAC 60.670 60.000 19.30 0.00 38.68 3.67
731 732 1.669440 GCTTCACCTACCCACGTGA 59.331 57.895 19.30 0.00 37.23 4.35
732 733 1.736645 CGCTTCACCTACCCACGTG 60.737 63.158 9.08 9.08 0.00 4.49
733 734 2.654877 CGCTTCACCTACCCACGT 59.345 61.111 0.00 0.00 0.00 4.49
734 735 2.813908 GCGCTTCACCTACCCACG 60.814 66.667 0.00 0.00 0.00 4.94
735 736 2.813908 CGCGCTTCACCTACCCAC 60.814 66.667 5.56 0.00 0.00 4.61
736 737 4.077184 CCGCGCTTCACCTACCCA 62.077 66.667 5.56 0.00 0.00 4.51
737 738 2.229690 TTACCGCGCTTCACCTACCC 62.230 60.000 5.56 0.00 0.00 3.69
738 739 0.390209 TTTACCGCGCTTCACCTACC 60.390 55.000 5.56 0.00 0.00 3.18
739 740 1.431496 TTTTACCGCGCTTCACCTAC 58.569 50.000 5.56 0.00 0.00 3.18
740 741 2.166821 TTTTTACCGCGCTTCACCTA 57.833 45.000 5.56 0.00 0.00 3.08
741 742 3.009612 TTTTTACCGCGCTTCACCT 57.990 47.368 5.56 0.00 0.00 4.00
759 760 4.461198 ACGGTCATTCAGGTCTTCTTTTT 58.539 39.130 0.00 0.00 0.00 1.94
760 761 4.086706 ACGGTCATTCAGGTCTTCTTTT 57.913 40.909 0.00 0.00 0.00 2.27
761 762 3.771577 ACGGTCATTCAGGTCTTCTTT 57.228 42.857 0.00 0.00 0.00 2.52
762 763 4.087182 TCTACGGTCATTCAGGTCTTCTT 58.913 43.478 0.00 0.00 0.00 2.52
763 764 3.697045 CTCTACGGTCATTCAGGTCTTCT 59.303 47.826 0.00 0.00 0.00 2.85
764 765 3.444388 ACTCTACGGTCATTCAGGTCTTC 59.556 47.826 0.00 0.00 0.00 2.87
765 766 3.432378 ACTCTACGGTCATTCAGGTCTT 58.568 45.455 0.00 0.00 0.00 3.01
766 767 3.088789 ACTCTACGGTCATTCAGGTCT 57.911 47.619 0.00 0.00 0.00 3.85
767 768 4.978083 TTACTCTACGGTCATTCAGGTC 57.022 45.455 0.00 0.00 0.00 3.85
768 769 5.733620 TTTTACTCTACGGTCATTCAGGT 57.266 39.130 0.00 0.00 0.00 4.00
769 770 5.581085 CCTTTTTACTCTACGGTCATTCAGG 59.419 44.000 0.00 0.00 0.00 3.86
770 771 5.581085 CCCTTTTTACTCTACGGTCATTCAG 59.419 44.000 0.00 0.00 0.00 3.02
771 772 5.484715 CCCTTTTTACTCTACGGTCATTCA 58.515 41.667 0.00 0.00 0.00 2.57
772 773 4.331992 GCCCTTTTTACTCTACGGTCATTC 59.668 45.833 0.00 0.00 0.00 2.67
773 774 4.259356 GCCCTTTTTACTCTACGGTCATT 58.741 43.478 0.00 0.00 0.00 2.57
774 775 3.262405 TGCCCTTTTTACTCTACGGTCAT 59.738 43.478 0.00 0.00 0.00 3.06
775 776 2.633967 TGCCCTTTTTACTCTACGGTCA 59.366 45.455 0.00 0.00 0.00 4.02
776 777 3.056322 TCTGCCCTTTTTACTCTACGGTC 60.056 47.826 0.00 0.00 0.00 4.79
777 778 2.901839 TCTGCCCTTTTTACTCTACGGT 59.098 45.455 0.00 0.00 0.00 4.83
778 779 3.522553 CTCTGCCCTTTTTACTCTACGG 58.477 50.000 0.00 0.00 0.00 4.02
779 780 2.930682 GCTCTGCCCTTTTTACTCTACG 59.069 50.000 0.00 0.00 0.00 3.51
780 781 3.939066 TGCTCTGCCCTTTTTACTCTAC 58.061 45.455 0.00 0.00 0.00 2.59
781 782 4.041691 AGTTGCTCTGCCCTTTTTACTCTA 59.958 41.667 0.00 0.00 0.00 2.43
782 783 3.149981 GTTGCTCTGCCCTTTTTACTCT 58.850 45.455 0.00 0.00 0.00 3.24
783 784 3.057946 CAGTTGCTCTGCCCTTTTTACTC 60.058 47.826 0.00 0.00 37.36 2.59
784 785 2.887152 CAGTTGCTCTGCCCTTTTTACT 59.113 45.455 0.00 0.00 37.36 2.24
785 786 2.029918 CCAGTTGCTCTGCCCTTTTTAC 60.030 50.000 4.40 0.00 42.38 2.01
786 787 2.238521 CCAGTTGCTCTGCCCTTTTTA 58.761 47.619 4.40 0.00 42.38 1.52
787 788 1.043022 CCAGTTGCTCTGCCCTTTTT 58.957 50.000 4.40 0.00 42.38 1.94
788 789 1.466851 GCCAGTTGCTCTGCCCTTTT 61.467 55.000 4.40 0.00 42.38 2.27
789 790 1.905354 GCCAGTTGCTCTGCCCTTT 60.905 57.895 4.40 0.00 42.38 3.11
790 791 2.282745 GCCAGTTGCTCTGCCCTT 60.283 61.111 4.40 0.00 42.38 3.95
791 792 4.711949 CGCCAGTTGCTCTGCCCT 62.712 66.667 4.40 0.00 42.38 5.19
795 796 3.429141 CTGCCGCCAGTTGCTCTG 61.429 66.667 3.18 3.18 43.27 3.35
813 814 2.933287 TACCACACCTGGCCCTGG 60.933 66.667 4.90 4.90 42.08 4.45
826 828 3.897239 CCATTAATTCCACTGCCTACCA 58.103 45.455 0.00 0.00 0.00 3.25
830 832 1.064758 TCGCCATTAATTCCACTGCCT 60.065 47.619 0.00 0.00 0.00 4.75
1068 1093 2.428171 GTGGCAGTAATACTCACGGGTA 59.572 50.000 0.00 0.00 0.00 3.69
1080 1105 1.629043 AGAGAAGACGGTGGCAGTAA 58.371 50.000 0.00 0.00 0.00 2.24
1119 1146 4.502950 GGAAGAAGGCATGGATCTGTCTAG 60.503 50.000 0.00 0.00 29.02 2.43
1154 1181 2.570135 GAGGAATAAGCAAGGCAGGAG 58.430 52.381 0.00 0.00 0.00 3.69
1168 1195 1.433879 CGAGGTTCTCGCGAGGAAT 59.566 57.895 33.98 19.14 46.75 3.01
1193 1220 2.507324 GCTCGACTCCGAACTGGC 60.507 66.667 0.00 0.00 45.04 4.85
1212 1239 3.319122 ACCTTGCAGATGACAGGAAAAAC 59.681 43.478 6.87 0.00 0.00 2.43
1221 1248 3.603532 TCAATCAGACCTTGCAGATGAC 58.396 45.455 0.00 0.00 0.00 3.06
1224 1255 5.627182 ACTATCAATCAGACCTTGCAGAT 57.373 39.130 0.00 0.00 0.00 2.90
1260 1353 3.119531 TGCAAAGAAAAGACGGCATATGG 60.120 43.478 4.56 0.00 0.00 2.74
1269 1362 2.127251 CGCCCTTTGCAAAGAAAAGAC 58.873 47.619 35.25 17.95 41.33 3.01
1312 1405 5.830000 AGCCGGGAGACAAATTTATTTAC 57.170 39.130 2.18 0.00 0.00 2.01
1493 1587 5.395324 GCAGCACTAGAGTAAACCATTAGGA 60.395 44.000 0.00 0.00 38.69 2.94
1518 1612 0.459489 GTGCAGGTTTTGTGCCAGAA 59.541 50.000 0.00 0.00 40.43 3.02
1536 1630 5.700183 TCTGACAGGAGCATAATCTAGAGT 58.300 41.667 1.81 0.00 0.00 3.24
1564 1659 4.125703 GAGCCATTTCAGGTACATCAGAG 58.874 47.826 0.00 0.00 0.00 3.35
1567 1662 2.499693 TCGAGCCATTTCAGGTACATCA 59.500 45.455 0.00 0.00 0.00 3.07
1568 1663 2.866762 GTCGAGCCATTTCAGGTACATC 59.133 50.000 0.00 0.00 0.00 3.06
1599 1697 1.375013 CAAAATGGGCTGTGGCTGC 60.375 57.895 0.00 0.00 38.73 5.25
1632 1738 5.620206 TCTGTCTTTCTTTGCAAGGTATGA 58.380 37.500 8.56 4.23 0.00 2.15
1656 1762 6.766467 ACAAGTCCGAAATCCTATTACCAATC 59.234 38.462 0.00 0.00 0.00 2.67
1674 1781 2.819608 ACATGTGGTTGCATACAAGTCC 59.180 45.455 0.00 0.00 36.16 3.85
1687 1794 7.308589 GCTTCTTGAAACAGTTATACATGTGGT 60.309 37.037 9.11 0.00 0.00 4.16
1706 1813 4.499183 ACAACGGAATCTAGAGCTTCTTG 58.501 43.478 0.00 3.13 0.00 3.02
1711 1818 4.442192 GGATTGACAACGGAATCTAGAGCT 60.442 45.833 0.00 0.00 0.00 4.09
1823 1934 1.947597 GCATGAAGCATTTGGCCCGA 61.948 55.000 0.00 0.00 46.50 5.14
1880 1991 2.684843 GCTGAAGTTGCGGCAGAGG 61.685 63.158 1.67 0.00 39.93 3.69
1943 2054 0.817013 CAGCTCCACAGAGAGACCTC 59.183 60.000 0.00 0.00 43.39 3.85
2007 2118 0.033601 TTCCAGCCAACAACACCACT 60.034 50.000 0.00 0.00 0.00 4.00
2010 2121 1.270252 CCATTTCCAGCCAACAACACC 60.270 52.381 0.00 0.00 0.00 4.16
2056 2167 3.131478 CACCGGGAAATGCGGTCC 61.131 66.667 6.32 0.00 33.25 4.46
2083 2194 2.961768 CACCGGTGCAATTGGGAC 59.038 61.111 24.02 0.00 37.06 4.46
2227 2338 8.241367 ACAAAAGTACTTCAGTGTTACCAAAAG 58.759 33.333 8.95 0.00 0.00 2.27
2393 2508 0.039165 GCCAAACCACAACAGCTAGC 60.039 55.000 6.62 6.62 0.00 3.42
2495 2610 4.394920 TCTTCACTGTTGAACACTTTCCAC 59.605 41.667 0.00 0.00 36.79 4.02
2564 2679 1.619654 CACCTGTCTTGGCATTTCCA 58.380 50.000 0.00 0.00 44.85 3.53
2619 2734 9.206870 GGATCTCTTCAATCTCTTAATTGCTAG 57.793 37.037 0.00 0.00 36.72 3.42
2690 2805 4.626042 AGTTAGGATGATAGAGCTTTGCG 58.374 43.478 0.00 0.00 0.00 4.85
2711 2826 3.157087 ACATCCTTTTACAGCCACCAAG 58.843 45.455 0.00 0.00 0.00 3.61
2714 2829 2.890945 ACAACATCCTTTTACAGCCACC 59.109 45.455 0.00 0.00 0.00 4.61
2783 2898 1.302431 CAGCCACACATCCAACGGA 60.302 57.895 0.00 0.00 35.55 4.69
2964 3205 0.035630 AGACCACAGGAGCTTCATGC 60.036 55.000 0.00 0.00 43.29 4.06
2965 3206 3.529533 CTTAGACCACAGGAGCTTCATG 58.470 50.000 0.00 0.00 33.86 3.07
2966 3207 2.093235 GCTTAGACCACAGGAGCTTCAT 60.093 50.000 0.00 0.00 0.00 2.57
2967 3208 1.276421 GCTTAGACCACAGGAGCTTCA 59.724 52.381 0.00 0.00 0.00 3.02
2968 3209 1.552792 AGCTTAGACCACAGGAGCTTC 59.447 52.381 0.00 0.00 40.55 3.86
2973 3214 1.055849 TTGCAGCTTAGACCACAGGA 58.944 50.000 0.00 0.00 0.00 3.86
3022 3263 5.745294 CACAGCAAACAGGCATCAATATTAC 59.255 40.000 0.00 0.00 35.83 1.89
3051 3292 6.485313 CCATTTAACGAGCAACCATAATAGGA 59.515 38.462 0.00 0.00 0.00 2.94
3073 3317 2.840651 AGGCTACAGCTACAAGTTCCAT 59.159 45.455 0.54 0.00 41.70 3.41
3087 3331 8.946085 CAAAGAATTAAACATCTGTAGGCTACA 58.054 33.333 24.84 24.84 37.13 2.74
3088 3332 8.398665 CCAAAGAATTAAACATCTGTAGGCTAC 58.601 37.037 17.76 17.76 0.00 3.58
3089 3333 8.325787 TCCAAAGAATTAAACATCTGTAGGCTA 58.674 33.333 0.00 0.00 0.00 3.93
3090 3334 7.175104 TCCAAAGAATTAAACATCTGTAGGCT 58.825 34.615 0.00 0.00 0.00 4.58
3091 3335 7.391148 TCCAAAGAATTAAACATCTGTAGGC 57.609 36.000 0.00 0.00 0.00 3.93
3112 3356 1.927487 AGCATGTCCAGCATTTTCCA 58.073 45.000 0.00 0.00 35.19 3.53
3182 3427 3.807622 ACAACAGTACAACGGTGAATCTG 59.192 43.478 7.88 14.40 0.00 2.90
3183 3428 4.067972 ACAACAGTACAACGGTGAATCT 57.932 40.909 7.88 0.00 0.00 2.40
3195 3440 5.839621 TGTCAGAGAAACCTACAACAGTAC 58.160 41.667 0.00 0.00 0.00 2.73
3231 3476 6.041296 TGCAGCAATCATTCTATCTAGTCTGA 59.959 38.462 0.00 0.00 0.00 3.27
3232 3477 6.221659 TGCAGCAATCATTCTATCTAGTCTG 58.778 40.000 0.00 0.00 0.00 3.51
3233 3478 6.416631 TGCAGCAATCATTCTATCTAGTCT 57.583 37.500 0.00 0.00 0.00 3.24
3234 3479 5.120519 GCTGCAGCAATCATTCTATCTAGTC 59.879 44.000 33.36 0.00 41.59 2.59
3236 3481 4.392445 GGCTGCAGCAATCATTCTATCTAG 59.608 45.833 37.63 0.00 44.36 2.43
3237 3482 4.041321 AGGCTGCAGCAATCATTCTATCTA 59.959 41.667 37.63 0.00 44.36 1.98
3238 3483 3.147629 GGCTGCAGCAATCATTCTATCT 58.852 45.455 37.63 0.00 44.36 1.98
3239 3484 3.147629 AGGCTGCAGCAATCATTCTATC 58.852 45.455 37.63 17.02 44.36 2.08
3314 3562 9.202273 GCCAAATGTCTCAAATTAATGTTAACA 57.798 29.630 11.41 11.41 0.00 2.41
3316 3564 9.421806 CAGCCAAATGTCTCAAATTAATGTTAA 57.578 29.630 0.00 0.00 0.00 2.01
3373 3621 9.869757 CGATCATTATTGGTACTAATATGGTCA 57.130 33.333 20.90 8.22 0.00 4.02
3374 3622 8.818057 GCGATCATTATTGGTACTAATATGGTC 58.182 37.037 11.93 14.60 0.00 4.02
3390 3638 5.639506 GCACCAGTAAGTATGCGATCATTAT 59.360 40.000 0.00 0.00 34.22 1.28
3409 3657 2.108075 TCTGGATTGGAAAAGAGCACCA 59.892 45.455 0.00 0.00 0.00 4.17
3414 3662 6.225318 TGCAAAAATCTGGATTGGAAAAGAG 58.775 36.000 0.00 0.00 0.00 2.85
3421 3669 4.823157 TGTCATGCAAAAATCTGGATTGG 58.177 39.130 0.00 0.00 0.00 3.16
3422 3670 5.350365 CCTTGTCATGCAAAAATCTGGATTG 59.650 40.000 0.00 0.00 36.53 2.67
3423 3671 5.012354 ACCTTGTCATGCAAAAATCTGGATT 59.988 36.000 0.00 0.00 36.53 3.01
3424 3672 4.529377 ACCTTGTCATGCAAAAATCTGGAT 59.471 37.500 0.00 0.00 36.53 3.41
3529 3777 1.654220 CACAAACTTGGACAGCCCG 59.346 57.895 0.00 0.00 37.93 6.13
3646 3894 1.080772 CACGCCGAAGCTGTAGACA 60.081 57.895 0.00 0.00 36.60 3.41
3694 3942 4.680237 TCAACCGACTGCGCTGGG 62.680 66.667 18.98 12.98 35.83 4.45
3706 3954 0.743097 GCCATCCAGCAGATTCAACC 59.257 55.000 0.00 0.00 30.59 3.77
3730 3978 0.865769 GCGTCGCCCATTCGAATATT 59.134 50.000 10.97 0.00 40.43 1.28
3751 3999 2.040544 CCGGTGTGATTGGACCAGC 61.041 63.158 0.00 0.00 31.97 4.85
3803 4051 2.175202 GATCACTCCTATCTCCGGCAT 58.825 52.381 0.00 0.00 0.00 4.40
3892 4140 1.079612 CTGCAGCTGATGGACGACA 60.080 57.895 20.43 1.68 0.00 4.35
3922 4170 1.373497 CTCAGACGCCGCTGACTTT 60.373 57.895 7.06 0.00 39.84 2.66
3973 4221 1.164662 CCAATGGCAGCATCGGAGAG 61.165 60.000 0.00 0.00 43.63 3.20
3976 4224 1.153107 CTCCAATGGCAGCATCGGA 60.153 57.895 0.00 0.00 0.00 4.55
4036 4284 2.035832 TGACGATGAGAAGAACAGCACA 59.964 45.455 0.00 0.00 0.00 4.57
4037 4285 2.665537 CTGACGATGAGAAGAACAGCAC 59.334 50.000 0.00 0.00 0.00 4.40
4038 4286 2.928301 GCTGACGATGAGAAGAACAGCA 60.928 50.000 0.00 0.00 45.33 4.41
4039 4287 1.658095 GCTGACGATGAGAAGAACAGC 59.342 52.381 0.00 0.00 41.33 4.40
4040 4288 2.266554 GGCTGACGATGAGAAGAACAG 58.733 52.381 0.00 0.00 0.00 3.16
4054 4302 0.179084 TGCGCTACCTAATGGCTGAC 60.179 55.000 9.73 0.00 36.63 3.51
4114 4362 2.806244 ACAAGAAAGTCGTTGCGCTTAT 59.194 40.909 9.73 0.00 0.00 1.73
4176 4425 2.825836 GATGGCAAGCACGAGGGG 60.826 66.667 0.00 0.00 0.00 4.79
4184 4433 2.506217 TCGACGACGATGGCAAGC 60.506 61.111 5.75 0.00 43.81 4.01
4277 4526 5.766150 ACAGCATCTACTGAGTAGACATC 57.234 43.478 23.37 14.87 46.06 3.06
4313 4564 4.321718 ACCACTGACATCAACATTCAGAG 58.678 43.478 4.88 0.00 39.36 3.35
4342 4593 5.982890 ACAATAAGTTGGGAAAGGATGTG 57.017 39.130 0.00 0.00 39.70 3.21
4362 4613 9.151471 GAATTGTAGTAACTATGAAGCTCAACA 57.849 33.333 0.00 0.00 0.00 3.33
4381 4632 9.299963 CTCAACATGTTTTTGTTCTGAATTGTA 57.700 29.630 8.77 0.00 37.73 2.41
4383 4634 8.410030 TCTCAACATGTTTTTGTTCTGAATTG 57.590 30.769 8.77 0.00 37.73 2.32
4384 4635 9.603921 ATTCTCAACATGTTTTTGTTCTGAATT 57.396 25.926 8.77 0.00 37.73 2.17
4388 4639 9.681692 TGATATTCTCAACATGTTTTTGTTCTG 57.318 29.630 8.77 0.00 37.73 3.02
4417 4668 1.755380 GTTCGTCCAGTGTAGCCCTAT 59.245 52.381 0.00 0.00 0.00 2.57
4433 4684 7.085116 ACTTCACTAGTTACTTCATGAGTTCG 58.915 38.462 0.00 0.00 39.86 3.95
4539 4984 1.812922 CGCTAGCCAGCCACTGAAG 60.813 63.158 9.66 0.00 45.64 3.02
4646 5091 4.737177 AGCAGAGGGCCAGCAAGC 62.737 66.667 6.18 6.05 46.50 4.01
4788 5233 2.413112 CGACAATGACGATTTCTGCACT 59.587 45.455 0.00 0.00 0.00 4.40
4797 5242 2.844122 TCATCGACGACAATGACGAT 57.156 45.000 12.41 7.64 45.03 3.73
4803 5248 3.055591 GCTCATCATCATCGACGACAAT 58.944 45.455 0.00 0.00 0.00 2.71
4894 5369 3.774702 GACGCCGTTGTTCCGAGC 61.775 66.667 0.00 0.00 0.00 5.03
4962 5437 1.909700 TGTTCATGAGCCAAAGGGAC 58.090 50.000 7.13 0.00 35.59 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.