Multiple sequence alignment - TraesCS3D01G074400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G074400 chr3D 100.000 2503 0 0 1 2503 35663872 35661370 0.000000e+00 4623.0
1 TraesCS3D01G074400 chr3A 87.746 661 44 14 1 653 46606045 46605414 0.000000e+00 737.0
2 TraesCS3D01G074400 chr3A 87.623 509 35 10 1257 1743 46604692 46604190 1.300000e-157 566.0
3 TraesCS3D01G074400 chr3A 86.475 488 26 16 776 1254 46605217 46604761 1.340000e-137 499.0
4 TraesCS3D01G074400 chr3A 92.857 56 4 0 664 719 46605430 46605375 5.740000e-12 82.4
5 TraesCS3D01G074400 chrUn 80.920 739 49 42 1329 2000 39285263 39285976 1.340000e-137 499.0
6 TraesCS3D01G074400 chrUn 86.811 417 30 16 776 1187 39284682 39285078 2.280000e-120 442.0
7 TraesCS3D01G074400 chrUn 96.262 107 3 1 548 653 39284387 39284493 9.200000e-40 174.0
8 TraesCS3D01G074400 chrUn 82.734 139 6 10 789 922 73932601 73932476 9.470000e-20 108.0
9 TraesCS3D01G074400 chr1B 92.754 69 5 0 1001 1069 22069862 22069794 1.580000e-17 100.0
10 TraesCS3D01G074400 chr1D 91.176 68 6 0 1001 1068 15321591 15321658 2.650000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G074400 chr3D 35661370 35663872 2502 True 4623.000000 4623 100.000000 1 2503 1 chr3D.!!$R1 2502
1 TraesCS3D01G074400 chr3A 46604190 46606045 1855 True 471.100000 737 88.675250 1 1743 4 chr3A.!!$R1 1742
2 TraesCS3D01G074400 chrUn 39284387 39285976 1589 False 371.666667 499 87.997667 548 2000 3 chrUn.!!$F1 1452

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
656 666 0.106819 GCATGTTCTGGATGCTCCCT 60.107 55.0 0.0 0.0 42.52 4.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1823 2103 0.03601 AGAGCTGGCACCACACATAC 60.036 55.0 0.0 0.0 0.0 2.39 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.407918 ATCTCCTTTCCCCCGCAAAA 59.592 50.000 0.00 0.00 0.00 2.44
41 42 4.649088 AAAGAGTAGTTTGTGGGTTTGC 57.351 40.909 0.00 0.00 0.00 3.68
45 46 1.265905 GTAGTTTGTGGGTTTGCCTCG 59.734 52.381 0.00 0.00 34.45 4.63
58 59 2.269241 CCTCGCCTTCTTCCCCAC 59.731 66.667 0.00 0.00 0.00 4.61
67 68 3.157881 CCTTCTTCCCCACTTTTTCCTC 58.842 50.000 0.00 0.00 0.00 3.71
172 173 1.614996 AAACACATCCCGCATCAACA 58.385 45.000 0.00 0.00 0.00 3.33
175 176 1.018752 CACATCCCGCATCAACACGA 61.019 55.000 0.00 0.00 0.00 4.35
188 189 6.564499 CGCATCAACACGATCAAATCATATCA 60.564 38.462 0.00 0.00 29.21 2.15
198 199 8.562892 ACGATCAAATCATATCAAATCTCAACC 58.437 33.333 0.00 0.00 0.00 3.77
213 214 8.758715 CAAATCTCAACCAAATCAAAACTTCTC 58.241 33.333 0.00 0.00 0.00 2.87
339 344 2.990740 TGCAAAAACATACCCCCTCT 57.009 45.000 0.00 0.00 0.00 3.69
348 353 0.907704 ATACCCCCTCTGCGTGTCAA 60.908 55.000 0.00 0.00 0.00 3.18
438 443 2.766313 TGATGGATGTAAGGCATACGC 58.234 47.619 0.00 0.00 41.39 4.42
454 459 0.537188 ACGCCGGAGAAGATTGATGT 59.463 50.000 13.83 0.00 0.00 3.06
469 474 2.345876 TGATGTTGTATGTCCACGCTG 58.654 47.619 0.00 0.00 0.00 5.18
477 482 3.726517 GTCCACGCTGCAACGCAT 61.727 61.111 9.87 0.00 38.13 4.73
488 493 4.549458 GCTGCAACGCATGGATAATTAAT 58.451 39.130 0.00 0.00 38.13 1.40
567 576 5.445010 CCGCATAGAAAAAGCAAGCAATTTC 60.445 40.000 12.00 12.00 33.13 2.17
581 590 2.050691 CAATTTCTCGGGCAAACGTTG 58.949 47.619 0.00 0.00 34.94 4.10
655 665 2.412605 GCATGTTCTGGATGCTCCC 58.587 57.895 0.00 0.00 42.52 4.30
656 666 0.106819 GCATGTTCTGGATGCTCCCT 60.107 55.000 0.00 0.00 42.52 4.20
657 667 1.141657 GCATGTTCTGGATGCTCCCTA 59.858 52.381 0.00 0.00 42.52 3.53
658 668 2.421952 GCATGTTCTGGATGCTCCCTAA 60.422 50.000 0.00 0.00 42.52 2.69
659 669 3.889815 CATGTTCTGGATGCTCCCTAAA 58.110 45.455 0.50 0.00 35.03 1.85
660 670 4.272489 CATGTTCTGGATGCTCCCTAAAA 58.728 43.478 0.50 0.00 35.03 1.52
661 671 4.380843 TGTTCTGGATGCTCCCTAAAAA 57.619 40.909 0.50 0.00 35.03 1.94
722 732 3.052082 CCACACTTGGCAGGCTCG 61.052 66.667 0.00 0.00 35.56 5.03
723 733 3.052082 CACACTTGGCAGGCTCGG 61.052 66.667 0.00 0.00 0.00 4.63
746 783 1.682854 AGAATTATCGACGGCCGGTAA 59.317 47.619 31.76 21.16 46.48 2.85
936 1054 2.867368 CAGAGCAAGTGCAGATCAGATC 59.133 50.000 6.00 1.64 45.16 2.75
937 1055 2.500504 AGAGCAAGTGCAGATCAGATCA 59.499 45.455 13.14 0.00 45.16 2.92
938 1056 2.867368 GAGCAAGTGCAGATCAGATCAG 59.133 50.000 13.14 5.81 45.16 2.90
939 1057 2.500504 AGCAAGTGCAGATCAGATCAGA 59.499 45.455 13.14 0.00 45.16 3.27
940 1058 2.608546 GCAAGTGCAGATCAGATCAGAC 59.391 50.000 13.14 5.88 41.59 3.51
975 1093 2.103373 AGAGCAGAGCGGATAAACTCA 58.897 47.619 0.00 0.00 35.28 3.41
976 1094 2.100584 AGAGCAGAGCGGATAAACTCAG 59.899 50.000 0.00 0.00 35.28 3.35
977 1095 2.099921 GAGCAGAGCGGATAAACTCAGA 59.900 50.000 0.00 0.00 35.28 3.27
980 1098 2.035632 AGAGCGGATAAACTCAGAGGG 58.964 52.381 1.53 0.00 35.28 4.30
992 1110 2.854736 TCAGAGGGAGATCATCACCA 57.145 50.000 3.27 0.00 27.93 4.17
996 1114 0.833287 AGGGAGATCATCACCAACCG 59.167 55.000 3.27 0.00 27.93 4.44
1084 1202 6.942576 CGGAGGGTAATTTATCATCTCCAATT 59.057 38.462 10.69 0.00 39.24 2.32
1110 1232 1.336440 CTGATCCTGCGTTCGATCTCT 59.664 52.381 0.00 0.00 36.62 3.10
1169 1292 3.382865 TCTCTCCTCGATCCATCTTGTTG 59.617 47.826 0.00 0.00 0.00 3.33
1170 1293 3.099905 TCTCCTCGATCCATCTTGTTGT 58.900 45.455 0.00 0.00 0.00 3.32
1173 1296 1.667724 CTCGATCCATCTTGTTGTGCC 59.332 52.381 0.00 0.00 0.00 5.01
1216 1346 5.278758 CCATCGATCTCCTCTTCTCCTTAAC 60.279 48.000 0.00 0.00 0.00 2.01
1220 1350 5.126384 CGATCTCCTCTTCTCCTTAACAACT 59.874 44.000 0.00 0.00 0.00 3.16
1222 1352 6.837471 TCTCCTCTTCTCCTTAACAACTAC 57.163 41.667 0.00 0.00 0.00 2.73
1223 1353 6.553857 TCTCCTCTTCTCCTTAACAACTACT 58.446 40.000 0.00 0.00 0.00 2.57
1225 1355 5.715753 TCCTCTTCTCCTTAACAACTACTCC 59.284 44.000 0.00 0.00 0.00 3.85
1226 1356 5.105269 CCTCTTCTCCTTAACAACTACTCCC 60.105 48.000 0.00 0.00 0.00 4.30
1227 1357 5.652324 TCTTCTCCTTAACAACTACTCCCT 58.348 41.667 0.00 0.00 0.00 4.20
1228 1358 6.797707 TCTTCTCCTTAACAACTACTCCCTA 58.202 40.000 0.00 0.00 0.00 3.53
1246 1376 6.109156 TCCCTATAAATTAAGAGATGCGCA 57.891 37.500 14.96 14.96 0.00 6.09
1254 1384 4.604843 TTAAGAGATGCGCATGAACAAG 57.395 40.909 30.76 0.00 0.00 3.16
1255 1385 0.731417 AGAGATGCGCATGAACAAGC 59.269 50.000 30.76 11.53 0.00 4.01
1290 1486 6.183360 TGTCGATTTCTTGGAGAGATCTACAG 60.183 42.308 10.02 0.00 36.94 2.74
1305 1504 7.286775 AGAGATCTACAGGAGTCCTTGTTAATC 59.713 40.741 9.68 15.15 0.00 1.75
1307 1506 2.973945 ACAGGAGTCCTTGTTAATCGC 58.026 47.619 9.68 0.00 0.00 4.58
1406 1618 3.274586 CTCATCATGGGCGTGGCG 61.275 66.667 0.00 0.00 0.00 5.69
1515 1750 4.158949 CCTGCAAGTGATCCATCAAATCAA 59.841 41.667 0.00 0.00 38.75 2.57
1526 1766 5.248640 TCCATCAAATCAAGACAAGGAGAC 58.751 41.667 0.00 0.00 0.00 3.36
1528 1768 3.067106 TCAAATCAAGACAAGGAGACGC 58.933 45.455 0.00 0.00 0.00 5.19
1535 1775 0.741221 GACAAGGAGACGCCATGGAC 60.741 60.000 18.40 5.97 39.67 4.02
1607 1866 7.639113 TTTTAATTGCCACCGAGAATAAGAT 57.361 32.000 0.00 0.00 0.00 2.40
1619 1888 6.183360 ACCGAGAATAAGATGAGATCTATCGC 60.183 42.308 0.00 0.00 39.08 4.58
1632 1901 1.397343 TCTATCGCATCGTATCGAGCC 59.603 52.381 0.00 0.00 39.91 4.70
1633 1902 1.130561 CTATCGCATCGTATCGAGCCA 59.869 52.381 0.00 0.00 39.91 4.75
1634 1903 0.387367 ATCGCATCGTATCGAGCCAC 60.387 55.000 0.00 0.00 39.91 5.01
1635 1904 1.008424 CGCATCGTATCGAGCCACT 60.008 57.895 0.00 0.00 39.91 4.00
1636 1905 0.237498 CGCATCGTATCGAGCCACTA 59.763 55.000 0.00 0.00 39.91 2.74
1637 1906 1.726251 CGCATCGTATCGAGCCACTAG 60.726 57.143 0.00 0.00 39.91 2.57
1649 1918 1.571919 GCCACTAGTAGTTCATGGCG 58.428 55.000 12.34 0.00 45.85 5.69
1653 1922 4.299155 CCACTAGTAGTTCATGGCGTATG 58.701 47.826 0.00 0.00 38.17 2.39
1654 1923 4.202121 CCACTAGTAGTTCATGGCGTATGT 60.202 45.833 0.00 0.00 38.01 2.29
1700 1978 1.865865 CTGTGTAAGGCGTCTTGTGT 58.134 50.000 13.69 0.00 34.59 3.72
1725 2005 1.083489 TGCGCCTTTTCCTATGTTCG 58.917 50.000 4.18 0.00 0.00 3.95
1728 2008 2.888594 CGCCTTTTCCTATGTTCGAGA 58.111 47.619 0.00 0.00 0.00 4.04
1738 2018 0.747255 ATGTTCGAGATCCGTCCTGG 59.253 55.000 3.97 0.00 39.75 4.45
1743 2023 1.153549 GAGATCCGTCCTGGTGTGC 60.154 63.158 0.00 0.00 39.52 4.57
1744 2024 2.125106 GATCCGTCCTGGTGTGCC 60.125 66.667 0.00 0.00 39.52 5.01
1745 2025 2.607750 ATCCGTCCTGGTGTGCCT 60.608 61.111 0.00 0.00 39.52 4.75
1746 2026 2.185310 GATCCGTCCTGGTGTGCCTT 62.185 60.000 0.00 0.00 39.52 4.35
1747 2027 2.185310 ATCCGTCCTGGTGTGCCTTC 62.185 60.000 0.00 0.00 39.52 3.46
1753 2033 3.901797 CTGGTGTGCCTTCCCCGTC 62.902 68.421 0.00 0.00 35.27 4.79
1764 2044 3.306156 GCCTTCCCCGTCTTATCTACATC 60.306 52.174 0.00 0.00 0.00 3.06
1767 2047 5.183522 CCTTCCCCGTCTTATCTACATCTAC 59.816 48.000 0.00 0.00 0.00 2.59
1768 2048 5.314718 TCCCCGTCTTATCTACATCTACA 57.685 43.478 0.00 0.00 0.00 2.74
1770 2050 5.710567 TCCCCGTCTTATCTACATCTACATG 59.289 44.000 0.00 0.00 35.92 3.21
1771 2051 5.477291 CCCCGTCTTATCTACATCTACATGT 59.523 44.000 2.69 2.69 45.73 3.21
1772 2052 6.657966 CCCCGTCTTATCTACATCTACATGTA 59.342 42.308 5.25 5.25 41.81 2.29
1773 2053 7.339721 CCCCGTCTTATCTACATCTACATGTAT 59.660 40.741 5.91 0.00 43.29 2.29
1774 2054 8.184848 CCCGTCTTATCTACATCTACATGTATG 58.815 40.741 5.91 6.54 43.29 2.39
1775 2055 8.731605 CCGTCTTATCTACATCTACATGTATGT 58.268 37.037 16.43 16.43 43.29 2.29
1819 2099 9.416284 TGGAGTTTCTGTCTATGTATGTATGTA 57.584 33.333 0.00 0.00 0.00 2.29
1833 2123 7.787028 TGTATGTATGTATGTGTATGTGTGGT 58.213 34.615 0.00 0.00 0.00 4.16
1844 2134 0.692476 ATGTGTGGTGCCAGCTCTTA 59.308 50.000 0.00 0.00 0.00 2.10
1845 2135 0.692476 TGTGTGGTGCCAGCTCTTAT 59.308 50.000 0.00 0.00 0.00 1.73
1846 2136 1.073763 TGTGTGGTGCCAGCTCTTATT 59.926 47.619 0.00 0.00 0.00 1.40
1848 2138 2.558359 GTGTGGTGCCAGCTCTTATTTT 59.442 45.455 0.00 0.00 0.00 1.82
1849 2139 3.005791 GTGTGGTGCCAGCTCTTATTTTT 59.994 43.478 0.00 0.00 0.00 1.94
1886 2183 3.081061 TCTGCACAAGTAAATGGCGATT 58.919 40.909 0.00 0.00 0.00 3.34
1890 2187 3.016736 CACAAGTAAATGGCGATTCCCT 58.983 45.455 0.00 0.00 0.00 4.20
1893 2190 5.299279 CACAAGTAAATGGCGATTCCCTATT 59.701 40.000 0.00 0.00 0.00 1.73
1898 2195 2.136298 TGGCGATTCCCTATTGCAAA 57.864 45.000 1.71 0.00 44.27 3.68
1900 2197 2.828520 TGGCGATTCCCTATTGCAAAAA 59.171 40.909 1.71 0.00 44.27 1.94
1901 2198 3.450457 TGGCGATTCCCTATTGCAAAAAT 59.550 39.130 1.71 0.00 44.27 1.82
1902 2199 4.646945 TGGCGATTCCCTATTGCAAAAATA 59.353 37.500 1.71 0.00 44.27 1.40
1937 2236 6.839124 TGAATATGGCAACTCAAATCAACT 57.161 33.333 0.00 0.00 37.61 3.16
1938 2237 6.855836 TGAATATGGCAACTCAAATCAACTC 58.144 36.000 0.00 0.00 37.61 3.01
1943 2242 2.819348 GCAACTCAAATCAACTCCCCCT 60.819 50.000 0.00 0.00 0.00 4.79
1944 2243 3.500343 CAACTCAAATCAACTCCCCCTT 58.500 45.455 0.00 0.00 0.00 3.95
1947 2246 5.333566 ACTCAAATCAACTCCCCCTTTTA 57.666 39.130 0.00 0.00 0.00 1.52
1950 2253 5.711698 TCAAATCAACTCCCCCTTTTAGTT 58.288 37.500 0.00 0.00 33.82 2.24
1963 2266 6.415573 CCCCTTTTAGTTGTACTAGATGCTT 58.584 40.000 0.00 0.00 31.47 3.91
1971 2274 5.749109 AGTTGTACTAGATGCTTATGCGTTC 59.251 40.000 0.00 0.00 43.34 3.95
1972 2275 5.515797 TGTACTAGATGCTTATGCGTTCT 57.484 39.130 0.00 9.75 43.34 3.01
1973 2276 5.520632 TGTACTAGATGCTTATGCGTTCTC 58.479 41.667 0.00 0.00 43.34 2.87
1975 2278 6.485648 TGTACTAGATGCTTATGCGTTCTCTA 59.514 38.462 0.00 5.84 43.34 2.43
1977 2280 4.927978 AGATGCTTATGCGTTCTCTAGT 57.072 40.909 0.00 0.00 43.34 2.57
1978 2281 6.711194 ACTAGATGCTTATGCGTTCTCTAGTA 59.289 38.462 20.79 4.31 41.90 1.82
1982 2285 6.301687 TGCTTATGCGTTCTCTAGTACTAG 57.698 41.667 21.87 21.87 43.34 2.57
2043 2346 8.539770 CATAATAATGGACTTGATAACGCTCT 57.460 34.615 0.00 0.00 0.00 4.09
2044 2347 9.639601 CATAATAATGGACTTGATAACGCTCTA 57.360 33.333 0.00 0.00 0.00 2.43
2047 2350 8.764524 ATAATGGACTTGATAACGCTCTAATC 57.235 34.615 0.00 0.00 0.00 1.75
2048 2351 5.592104 TGGACTTGATAACGCTCTAATCA 57.408 39.130 0.00 0.00 0.00 2.57
2049 2352 5.972935 TGGACTTGATAACGCTCTAATCAA 58.027 37.500 0.00 0.00 37.30 2.57
2050 2353 6.582636 TGGACTTGATAACGCTCTAATCAAT 58.417 36.000 0.00 0.00 38.55 2.57
2051 2354 7.047891 TGGACTTGATAACGCTCTAATCAATT 58.952 34.615 0.00 0.00 38.55 2.32
2052 2355 7.011389 TGGACTTGATAACGCTCTAATCAATTG 59.989 37.037 0.00 0.00 38.55 2.32
2053 2356 7.011482 GGACTTGATAACGCTCTAATCAATTGT 59.989 37.037 5.13 0.00 38.55 2.71
2054 2357 8.268850 ACTTGATAACGCTCTAATCAATTGTT 57.731 30.769 5.13 2.21 38.55 2.83
2055 2358 8.730680 ACTTGATAACGCTCTAATCAATTGTTT 58.269 29.630 5.13 6.16 38.55 2.83
2056 2359 8.894409 TTGATAACGCTCTAATCAATTGTTTG 57.106 30.769 11.26 4.53 35.32 2.93
2057 2360 8.039603 TGATAACGCTCTAATCAATTGTTTGT 57.960 30.769 11.26 0.00 34.32 2.83
2058 2361 8.511321 TGATAACGCTCTAATCAATTGTTTGTT 58.489 29.630 11.26 8.79 34.32 2.83
2059 2362 9.341899 GATAACGCTCTAATCAATTGTTTGTTT 57.658 29.630 11.26 0.40 34.32 2.83
2060 2363 6.991485 ACGCTCTAATCAATTGTTTGTTTG 57.009 33.333 11.26 2.67 34.32 2.93
2061 2364 6.503524 ACGCTCTAATCAATTGTTTGTTTGT 58.496 32.000 11.26 2.41 34.32 2.83
2062 2365 6.978080 ACGCTCTAATCAATTGTTTGTTTGTT 59.022 30.769 11.26 0.00 34.32 2.83
2063 2366 8.132362 ACGCTCTAATCAATTGTTTGTTTGTTA 58.868 29.630 11.26 0.00 34.32 2.41
2064 2367 8.417176 CGCTCTAATCAATTGTTTGTTTGTTAC 58.583 33.333 11.26 0.00 34.32 2.50
2065 2368 9.243637 GCTCTAATCAATTGTTTGTTTGTTACA 57.756 29.630 11.26 0.00 34.32 2.41
2078 2381 9.559958 GTTTGTTTGTTACAATAGAGATGATGG 57.440 33.333 0.00 0.00 45.72 3.51
2079 2382 7.320443 TGTTTGTTACAATAGAGATGATGGC 57.680 36.000 0.00 0.00 32.64 4.40
2080 2383 7.112122 TGTTTGTTACAATAGAGATGATGGCT 58.888 34.615 0.00 0.00 32.64 4.75
2081 2384 8.264347 TGTTTGTTACAATAGAGATGATGGCTA 58.736 33.333 0.00 0.00 32.64 3.93
2082 2385 9.109393 GTTTGTTACAATAGAGATGATGGCTAA 57.891 33.333 0.00 0.00 0.00 3.09
2083 2386 9.679661 TTTGTTACAATAGAGATGATGGCTAAA 57.320 29.630 0.00 0.00 0.00 1.85
2084 2387 9.851686 TTGTTACAATAGAGATGATGGCTAAAT 57.148 29.630 0.00 0.00 0.00 1.40
2085 2388 9.276590 TGTTACAATAGAGATGATGGCTAAATG 57.723 33.333 0.00 0.00 0.00 2.32
2086 2389 9.277783 GTTACAATAGAGATGATGGCTAAATGT 57.722 33.333 0.00 0.00 0.00 2.71
2087 2390 7.741027 ACAATAGAGATGATGGCTAAATGTG 57.259 36.000 0.00 0.00 0.00 3.21
2088 2391 7.285566 ACAATAGAGATGATGGCTAAATGTGT 58.714 34.615 0.00 0.00 0.00 3.72
2089 2392 7.443575 ACAATAGAGATGATGGCTAAATGTGTC 59.556 37.037 0.00 0.00 0.00 3.67
2090 2393 5.627182 AGAGATGATGGCTAAATGTGTCT 57.373 39.130 0.00 0.00 0.00 3.41
2091 2394 5.999044 AGAGATGATGGCTAAATGTGTCTT 58.001 37.500 0.00 0.00 0.00 3.01
2092 2395 6.421485 AGAGATGATGGCTAAATGTGTCTTT 58.579 36.000 0.00 0.00 0.00 2.52
2093 2396 7.568349 AGAGATGATGGCTAAATGTGTCTTTA 58.432 34.615 0.00 0.00 0.00 1.85
2094 2397 7.714377 AGAGATGATGGCTAAATGTGTCTTTAG 59.286 37.037 0.00 0.00 40.26 1.85
2095 2398 7.568349 AGATGATGGCTAAATGTGTCTTTAGA 58.432 34.615 7.56 0.00 39.87 2.10
2096 2399 8.216423 AGATGATGGCTAAATGTGTCTTTAGAT 58.784 33.333 7.56 0.00 39.87 1.98
2097 2400 7.792374 TGATGGCTAAATGTGTCTTTAGATC 57.208 36.000 7.56 4.05 39.87 2.75
2098 2401 7.337938 TGATGGCTAAATGTGTCTTTAGATCA 58.662 34.615 7.56 6.05 39.87 2.92
2099 2402 7.828717 TGATGGCTAAATGTGTCTTTAGATCAA 59.171 33.333 7.56 0.00 39.87 2.57
2100 2403 7.994425 TGGCTAAATGTGTCTTTAGATCAAA 57.006 32.000 7.56 0.00 39.87 2.69
2101 2404 8.579850 TGGCTAAATGTGTCTTTAGATCAAAT 57.420 30.769 7.56 0.00 39.87 2.32
2102 2405 8.677300 TGGCTAAATGTGTCTTTAGATCAAATC 58.323 33.333 7.56 0.00 39.87 2.17
2103 2406 8.677300 GGCTAAATGTGTCTTTAGATCAAATCA 58.323 33.333 7.56 0.00 39.87 2.57
2107 2410 9.903682 AAATGTGTCTTTAGATCAAATCAACTG 57.096 29.630 0.00 0.00 0.00 3.16
2108 2411 7.439157 TGTGTCTTTAGATCAAATCAACTGG 57.561 36.000 0.00 0.00 0.00 4.00
2109 2412 6.430925 TGTGTCTTTAGATCAAATCAACTGGG 59.569 38.462 0.00 0.00 0.00 4.45
2110 2413 6.431234 GTGTCTTTAGATCAAATCAACTGGGT 59.569 38.462 0.00 0.00 0.00 4.51
2111 2414 7.004086 TGTCTTTAGATCAAATCAACTGGGTT 58.996 34.615 0.00 0.00 0.00 4.11
2112 2415 7.505585 TGTCTTTAGATCAAATCAACTGGGTTT 59.494 33.333 0.00 0.00 0.00 3.27
2113 2416 9.010029 GTCTTTAGATCAAATCAACTGGGTTTA 57.990 33.333 0.00 0.00 0.00 2.01
2114 2417 9.581289 TCTTTAGATCAAATCAACTGGGTTTAA 57.419 29.630 0.00 0.00 0.00 1.52
2116 2419 9.974980 TTTAGATCAAATCAACTGGGTTTAAAC 57.025 29.630 9.98 9.98 0.00 2.01
2117 2420 7.595819 AGATCAAATCAACTGGGTTTAAACA 57.404 32.000 19.57 0.00 0.00 2.83
2118 2421 8.017418 AGATCAAATCAACTGGGTTTAAACAA 57.983 30.769 19.57 6.72 0.00 2.83
2119 2422 8.143835 AGATCAAATCAACTGGGTTTAAACAAG 58.856 33.333 19.57 17.09 0.00 3.16
2120 2423 7.176589 TCAAATCAACTGGGTTTAAACAAGT 57.823 32.000 19.57 17.67 0.00 3.16
2121 2424 7.616313 TCAAATCAACTGGGTTTAAACAAGTT 58.384 30.769 23.01 23.01 37.64 2.66
2122 2425 8.097662 TCAAATCAACTGGGTTTAAACAAGTTT 58.902 29.630 24.82 15.18 36.08 2.66
2123 2426 8.387354 CAAATCAACTGGGTTTAAACAAGTTTC 58.613 33.333 24.82 8.18 36.08 2.78
2124 2427 6.844097 TCAACTGGGTTTAAACAAGTTTCT 57.156 33.333 24.82 10.95 36.08 2.52
2125 2428 7.234661 TCAACTGGGTTTAAACAAGTTTCTT 57.765 32.000 24.82 10.69 36.08 2.52
2126 2429 7.672240 TCAACTGGGTTTAAACAAGTTTCTTT 58.328 30.769 24.82 10.43 36.08 2.52
2127 2430 7.815549 TCAACTGGGTTTAAACAAGTTTCTTTC 59.184 33.333 24.82 5.89 36.08 2.62
2128 2431 7.234661 ACTGGGTTTAAACAAGTTTCTTTCA 57.765 32.000 19.57 2.21 34.23 2.69
2129 2432 7.094631 ACTGGGTTTAAACAAGTTTCTTTCAC 58.905 34.615 19.57 0.00 34.23 3.18
2130 2433 6.399743 TGGGTTTAAACAAGTTTCTTTCACC 58.600 36.000 19.57 7.43 34.23 4.02
2131 2434 5.517411 GGGTTTAAACAAGTTTCTTTCACCG 59.483 40.000 19.57 0.00 34.23 4.94
2132 2435 6.324042 GGTTTAAACAAGTTTCTTTCACCGA 58.676 36.000 19.57 0.00 34.23 4.69
2133 2436 6.471198 GGTTTAAACAAGTTTCTTTCACCGAG 59.529 38.462 19.57 0.00 34.23 4.63
2134 2437 4.632538 AAACAAGTTTCTTTCACCGAGG 57.367 40.909 0.00 0.00 0.00 4.63
2135 2438 1.947456 ACAAGTTTCTTTCACCGAGGC 59.053 47.619 0.00 0.00 0.00 4.70
2136 2439 1.946768 CAAGTTTCTTTCACCGAGGCA 59.053 47.619 0.00 0.00 0.00 4.75
2137 2440 1.884235 AGTTTCTTTCACCGAGGCAG 58.116 50.000 0.00 0.00 0.00 4.85
2138 2441 1.416401 AGTTTCTTTCACCGAGGCAGA 59.584 47.619 0.00 0.00 0.00 4.26
2139 2442 2.158813 AGTTTCTTTCACCGAGGCAGAA 60.159 45.455 0.00 0.00 0.00 3.02
2140 2443 2.169832 TTCTTTCACCGAGGCAGAAG 57.830 50.000 0.00 0.00 0.00 2.85
2141 2444 0.321671 TCTTTCACCGAGGCAGAAGG 59.678 55.000 0.00 0.00 0.00 3.46
2142 2445 0.321671 CTTTCACCGAGGCAGAAGGA 59.678 55.000 2.36 0.00 0.00 3.36
2143 2446 0.762418 TTTCACCGAGGCAGAAGGAA 59.238 50.000 0.00 0.00 0.00 3.36
2144 2447 0.984230 TTCACCGAGGCAGAAGGAAT 59.016 50.000 0.00 0.00 0.00 3.01
2145 2448 1.860641 TCACCGAGGCAGAAGGAATA 58.139 50.000 0.00 0.00 0.00 1.75
2146 2449 2.184533 TCACCGAGGCAGAAGGAATAA 58.815 47.619 0.00 0.00 0.00 1.40
2147 2450 2.569853 TCACCGAGGCAGAAGGAATAAA 59.430 45.455 0.00 0.00 0.00 1.40
2148 2451 3.008594 TCACCGAGGCAGAAGGAATAAAA 59.991 43.478 0.00 0.00 0.00 1.52
2149 2452 3.947834 CACCGAGGCAGAAGGAATAAAAT 59.052 43.478 0.00 0.00 0.00 1.82
2150 2453 4.399303 CACCGAGGCAGAAGGAATAAAATT 59.601 41.667 0.00 0.00 0.00 1.82
2151 2454 5.016831 ACCGAGGCAGAAGGAATAAAATTT 58.983 37.500 0.00 0.00 0.00 1.82
2152 2455 5.125578 ACCGAGGCAGAAGGAATAAAATTTC 59.874 40.000 0.00 0.00 0.00 2.17
2153 2456 5.266242 CGAGGCAGAAGGAATAAAATTTCG 58.734 41.667 0.00 0.00 0.00 3.46
2154 2457 4.998788 AGGCAGAAGGAATAAAATTTCGC 58.001 39.130 0.00 0.00 0.00 4.70
2155 2458 4.112634 GGCAGAAGGAATAAAATTTCGCC 58.887 43.478 0.00 0.00 34.63 5.54
2156 2459 4.381505 GGCAGAAGGAATAAAATTTCGCCA 60.382 41.667 0.00 0.00 38.21 5.69
2157 2460 4.562789 GCAGAAGGAATAAAATTTCGCCAC 59.437 41.667 0.00 0.00 0.00 5.01
2158 2461 5.708948 CAGAAGGAATAAAATTTCGCCACA 58.291 37.500 0.00 0.00 0.00 4.17
2159 2462 5.572896 CAGAAGGAATAAAATTTCGCCACAC 59.427 40.000 0.00 0.00 0.00 3.82
2160 2463 4.450082 AGGAATAAAATTTCGCCACACC 57.550 40.909 0.00 0.00 0.00 4.16
2161 2464 4.086457 AGGAATAAAATTTCGCCACACCT 58.914 39.130 0.00 0.00 0.00 4.00
2162 2465 5.258051 AGGAATAAAATTTCGCCACACCTA 58.742 37.500 0.00 0.00 0.00 3.08
2163 2466 5.124936 AGGAATAAAATTTCGCCACACCTAC 59.875 40.000 0.00 0.00 0.00 3.18
2164 2467 2.981400 AAAATTTCGCCACACCTACG 57.019 45.000 0.00 0.00 0.00 3.51
2165 2468 2.172851 AAATTTCGCCACACCTACGA 57.827 45.000 0.00 0.00 0.00 3.43
2166 2469 2.172851 AATTTCGCCACACCTACGAA 57.827 45.000 0.00 0.00 43.42 3.85
2167 2470 1.435577 ATTTCGCCACACCTACGAAC 58.564 50.000 0.00 0.00 44.64 3.95
2168 2471 0.390124 TTTCGCCACACCTACGAACT 59.610 50.000 0.00 0.00 44.64 3.01
2169 2472 0.319211 TTCGCCACACCTACGAACTG 60.319 55.000 0.00 0.00 40.56 3.16
2170 2473 1.174078 TCGCCACACCTACGAACTGA 61.174 55.000 0.00 0.00 31.97 3.41
2171 2474 0.319211 CGCCACACCTACGAACTGAA 60.319 55.000 0.00 0.00 0.00 3.02
2172 2475 1.671850 CGCCACACCTACGAACTGAAT 60.672 52.381 0.00 0.00 0.00 2.57
2173 2476 2.416296 CGCCACACCTACGAACTGAATA 60.416 50.000 0.00 0.00 0.00 1.75
2174 2477 3.737047 CGCCACACCTACGAACTGAATAT 60.737 47.826 0.00 0.00 0.00 1.28
2175 2478 4.498513 CGCCACACCTACGAACTGAATATA 60.499 45.833 0.00 0.00 0.00 0.86
2176 2479 5.353938 GCCACACCTACGAACTGAATATAA 58.646 41.667 0.00 0.00 0.00 0.98
2177 2480 5.989777 GCCACACCTACGAACTGAATATAAT 59.010 40.000 0.00 0.00 0.00 1.28
2178 2481 6.482308 GCCACACCTACGAACTGAATATAATT 59.518 38.462 0.00 0.00 0.00 1.40
2179 2482 7.012044 GCCACACCTACGAACTGAATATAATTT 59.988 37.037 0.00 0.00 0.00 1.82
2180 2483 8.889717 CCACACCTACGAACTGAATATAATTTT 58.110 33.333 0.00 0.00 0.00 1.82
2181 2484 9.702726 CACACCTACGAACTGAATATAATTTTG 57.297 33.333 0.00 0.00 0.00 2.44
2182 2485 9.444600 ACACCTACGAACTGAATATAATTTTGT 57.555 29.630 0.00 0.00 0.00 2.83
2248 2551 4.606457 AAAAATACAGATGCAGACGCTC 57.394 40.909 0.00 0.00 39.64 5.03
2249 2552 2.967599 AATACAGATGCAGACGCTCA 57.032 45.000 0.00 0.00 39.64 4.26
2250 2553 2.215907 ATACAGATGCAGACGCTCAC 57.784 50.000 0.00 0.00 39.64 3.51
2251 2554 0.887933 TACAGATGCAGACGCTCACA 59.112 50.000 0.00 0.00 39.64 3.58
2252 2555 0.668706 ACAGATGCAGACGCTCACAC 60.669 55.000 0.00 0.00 39.64 3.82
2253 2556 0.668401 CAGATGCAGACGCTCACACA 60.668 55.000 0.00 0.00 39.64 3.72
2254 2557 0.668706 AGATGCAGACGCTCACACAC 60.669 55.000 0.00 0.00 39.64 3.82
2255 2558 0.945743 GATGCAGACGCTCACACACA 60.946 55.000 0.00 0.00 39.64 3.72
2256 2559 0.321034 ATGCAGACGCTCACACACAT 60.321 50.000 0.00 0.00 39.64 3.21
2257 2560 1.223417 TGCAGACGCTCACACACATG 61.223 55.000 0.00 0.00 39.64 3.21
2258 2561 1.224069 GCAGACGCTCACACACATGT 61.224 55.000 0.00 0.00 35.44 3.21
2259 2562 1.934849 GCAGACGCTCACACACATGTA 60.935 52.381 0.00 0.00 33.94 2.29
2260 2563 1.721389 CAGACGCTCACACACATGTAC 59.279 52.381 0.00 0.00 36.72 2.90
2261 2564 1.339929 AGACGCTCACACACATGTACA 59.660 47.619 0.00 0.00 36.72 2.90
2262 2565 2.029020 AGACGCTCACACACATGTACAT 60.029 45.455 1.41 1.41 36.72 2.29
2263 2566 3.192633 AGACGCTCACACACATGTACATA 59.807 43.478 8.32 0.00 36.72 2.29
2264 2567 3.250744 ACGCTCACACACATGTACATAC 58.749 45.455 8.32 0.00 36.72 2.39
2265 2568 3.249917 CGCTCACACACATGTACATACA 58.750 45.455 8.32 0.00 36.72 2.29
2266 2569 3.060761 CGCTCACACACATGTACATACAC 59.939 47.826 8.32 0.00 39.30 2.90
2267 2570 4.245660 GCTCACACACATGTACATACACT 58.754 43.478 8.32 0.00 39.30 3.55
2268 2571 4.327357 GCTCACACACATGTACATACACTC 59.673 45.833 8.32 0.00 39.30 3.51
2269 2572 5.461032 TCACACACATGTACATACACTCA 57.539 39.130 8.32 0.00 39.30 3.41
2270 2573 6.036577 TCACACACATGTACATACACTCAT 57.963 37.500 8.32 0.00 39.30 2.90
2271 2574 6.099341 TCACACACATGTACATACACTCATC 58.901 40.000 8.32 0.00 39.30 2.92
2272 2575 6.071391 TCACACACATGTACATACACTCATCT 60.071 38.462 8.32 0.00 39.30 2.90
2273 2576 6.254373 CACACACATGTACATACACTCATCTC 59.746 42.308 8.32 0.00 39.30 2.75
2274 2577 6.153510 ACACACATGTACATACACTCATCTCT 59.846 38.462 8.32 0.00 39.30 3.10
2275 2578 7.339466 ACACACATGTACATACACTCATCTCTA 59.661 37.037 8.32 0.00 39.30 2.43
2276 2579 8.355913 CACACATGTACATACACTCATCTCTAT 58.644 37.037 8.32 0.00 39.30 1.98
2277 2580 8.355913 ACACATGTACATACACTCATCTCTATG 58.644 37.037 8.32 0.00 39.30 2.23
2278 2581 7.811713 CACATGTACATACACTCATCTCTATGG 59.188 40.741 8.32 0.00 39.30 2.74
2279 2582 7.507277 ACATGTACATACACTCATCTCTATGGT 59.493 37.037 8.32 0.00 39.30 3.55
2280 2583 7.898014 TGTACATACACTCATCTCTATGGTT 57.102 36.000 0.00 0.00 33.61 3.67
2281 2584 8.990163 TGTACATACACTCATCTCTATGGTTA 57.010 34.615 0.00 0.00 33.61 2.85
2282 2585 9.416284 TGTACATACACTCATCTCTATGGTTAA 57.584 33.333 0.00 0.00 33.61 2.01
2283 2586 9.900710 GTACATACACTCATCTCTATGGTTAAG 57.099 37.037 0.00 0.00 33.61 1.85
2284 2587 7.437748 ACATACACTCATCTCTATGGTTAAGC 58.562 38.462 0.00 0.00 33.61 3.09
2285 2588 4.938080 ACACTCATCTCTATGGTTAAGCG 58.062 43.478 0.00 0.00 33.61 4.68
2286 2589 3.738282 CACTCATCTCTATGGTTAAGCGC 59.262 47.826 0.00 0.00 33.61 5.92
2287 2590 3.384789 ACTCATCTCTATGGTTAAGCGCA 59.615 43.478 11.47 0.00 33.61 6.09
2288 2591 3.717707 TCATCTCTATGGTTAAGCGCAC 58.282 45.455 11.47 0.00 33.61 5.34
2289 2592 2.203800 TCTCTATGGTTAAGCGCACG 57.796 50.000 11.47 0.00 0.00 5.34
2290 2593 0.577269 CTCTATGGTTAAGCGCACGC 59.423 55.000 11.47 6.99 42.33 5.34
2305 2608 4.132441 CGCGCACCGGTACCCTTA 62.132 66.667 6.87 0.00 0.00 2.69
2306 2609 2.502577 GCGCACCGGTACCCTTAT 59.497 61.111 6.87 0.00 0.00 1.73
2307 2610 1.885850 GCGCACCGGTACCCTTATG 60.886 63.158 6.87 0.59 0.00 1.90
2308 2611 1.817881 CGCACCGGTACCCTTATGA 59.182 57.895 6.87 0.00 0.00 2.15
2309 2612 0.249322 CGCACCGGTACCCTTATGAG 60.249 60.000 6.87 0.00 0.00 2.90
2310 2613 0.532196 GCACCGGTACCCTTATGAGC 60.532 60.000 6.87 0.00 0.00 4.26
2311 2614 0.828022 CACCGGTACCCTTATGAGCA 59.172 55.000 6.87 0.00 0.00 4.26
2312 2615 0.828677 ACCGGTACCCTTATGAGCAC 59.171 55.000 4.49 0.00 0.00 4.40
2313 2616 0.106149 CCGGTACCCTTATGAGCACC 59.894 60.000 6.25 0.00 0.00 5.01
2314 2617 1.120530 CGGTACCCTTATGAGCACCT 58.879 55.000 6.25 0.00 0.00 4.00
2315 2618 1.202533 CGGTACCCTTATGAGCACCTG 60.203 57.143 6.25 0.00 0.00 4.00
2316 2619 1.475213 GGTACCCTTATGAGCACCTGC 60.475 57.143 0.00 0.00 42.49 4.85
2327 2630 2.357517 CACCTGCGAGCGAGGTTT 60.358 61.111 13.73 0.00 41.31 3.27
2328 2631 2.357517 ACCTGCGAGCGAGGTTTG 60.358 61.111 11.54 0.00 41.31 2.93
2329 2632 2.048222 CCTGCGAGCGAGGTTTGA 60.048 61.111 0.00 0.00 0.00 2.69
2330 2633 1.448540 CCTGCGAGCGAGGTTTGAT 60.449 57.895 0.00 0.00 0.00 2.57
2331 2634 1.424493 CCTGCGAGCGAGGTTTGATC 61.424 60.000 0.00 0.00 0.00 2.92
2333 2636 1.805945 GCGAGCGAGGTTTGATCGT 60.806 57.895 5.94 0.00 46.12 3.73
2334 2637 1.352156 GCGAGCGAGGTTTGATCGTT 61.352 55.000 5.94 0.00 46.12 3.85
2335 2638 0.366871 CGAGCGAGGTTTGATCGTTG 59.633 55.000 0.00 0.00 40.12 4.10
2336 2639 0.721718 GAGCGAGGTTTGATCGTTGG 59.278 55.000 0.00 0.00 42.13 3.77
2337 2640 0.673644 AGCGAGGTTTGATCGTTGGG 60.674 55.000 0.00 0.00 42.13 4.12
2338 2641 1.644786 GCGAGGTTTGATCGTTGGGG 61.645 60.000 0.00 0.00 42.13 4.96
2339 2642 1.644786 CGAGGTTTGATCGTTGGGGC 61.645 60.000 0.00 0.00 35.48 5.80
2340 2643 0.322546 GAGGTTTGATCGTTGGGGCT 60.323 55.000 0.00 0.00 0.00 5.19
2341 2644 0.609131 AGGTTTGATCGTTGGGGCTG 60.609 55.000 0.00 0.00 0.00 4.85
2342 2645 1.595093 GGTTTGATCGTTGGGGCTGG 61.595 60.000 0.00 0.00 0.00 4.85
2343 2646 1.304052 TTTGATCGTTGGGGCTGGG 60.304 57.895 0.00 0.00 0.00 4.45
2344 2647 3.936772 TTGATCGTTGGGGCTGGGC 62.937 63.158 0.00 0.00 0.00 5.36
2345 2648 4.115199 GATCGTTGGGGCTGGGCT 62.115 66.667 0.00 0.00 0.00 5.19
2346 2649 2.690881 ATCGTTGGGGCTGGGCTA 60.691 61.111 0.00 0.00 0.00 3.93
2347 2650 2.056906 GATCGTTGGGGCTGGGCTAT 62.057 60.000 0.00 0.00 0.00 2.97
2348 2651 2.056906 ATCGTTGGGGCTGGGCTATC 62.057 60.000 0.00 0.00 0.00 2.08
2349 2652 2.746375 CGTTGGGGCTGGGCTATCT 61.746 63.158 0.00 0.00 0.00 1.98
2350 2653 1.152881 GTTGGGGCTGGGCTATCTG 60.153 63.158 0.00 0.00 0.00 2.90
2351 2654 3.060614 TTGGGGCTGGGCTATCTGC 62.061 63.158 0.00 0.00 41.94 4.26
2364 2667 4.135747 GCTATCTGCCCTCTTATCCATC 57.864 50.000 0.00 0.00 35.15 3.51
2365 2668 3.118445 GCTATCTGCCCTCTTATCCATCC 60.118 52.174 0.00 0.00 35.15 3.51
2366 2669 2.494888 TCTGCCCTCTTATCCATCCA 57.505 50.000 0.00 0.00 0.00 3.41
2367 2670 2.775418 TCTGCCCTCTTATCCATCCAA 58.225 47.619 0.00 0.00 0.00 3.53
2368 2671 2.439507 TCTGCCCTCTTATCCATCCAAC 59.560 50.000 0.00 0.00 0.00 3.77
2369 2672 1.494721 TGCCCTCTTATCCATCCAACC 59.505 52.381 0.00 0.00 0.00 3.77
2370 2673 1.494721 GCCCTCTTATCCATCCAACCA 59.505 52.381 0.00 0.00 0.00 3.67
2371 2674 2.749800 GCCCTCTTATCCATCCAACCAC 60.750 54.545 0.00 0.00 0.00 4.16
2372 2675 2.509548 CCCTCTTATCCATCCAACCACA 59.490 50.000 0.00 0.00 0.00 4.17
2373 2676 3.053693 CCCTCTTATCCATCCAACCACAA 60.054 47.826 0.00 0.00 0.00 3.33
2374 2677 4.569653 CCCTCTTATCCATCCAACCACAAA 60.570 45.833 0.00 0.00 0.00 2.83
2375 2678 5.203528 CCTCTTATCCATCCAACCACAAAT 58.796 41.667 0.00 0.00 0.00 2.32
2376 2679 5.658190 CCTCTTATCCATCCAACCACAAATT 59.342 40.000 0.00 0.00 0.00 1.82
2377 2680 6.406177 CCTCTTATCCATCCAACCACAAATTG 60.406 42.308 0.00 0.00 0.00 2.32
2378 2681 6.252233 TCTTATCCATCCAACCACAAATTGA 58.748 36.000 0.00 0.00 0.00 2.57
2379 2682 6.723515 TCTTATCCATCCAACCACAAATTGAA 59.276 34.615 0.00 0.00 0.00 2.69
2380 2683 7.399765 TCTTATCCATCCAACCACAAATTGAAT 59.600 33.333 0.00 0.00 0.00 2.57
2381 2684 5.822132 TCCATCCAACCACAAATTGAATT 57.178 34.783 0.00 0.00 0.00 2.17
2382 2685 6.185114 TCCATCCAACCACAAATTGAATTT 57.815 33.333 0.00 0.00 0.00 1.82
2383 2686 6.229733 TCCATCCAACCACAAATTGAATTTC 58.770 36.000 0.00 0.00 0.00 2.17
2384 2687 5.996513 CCATCCAACCACAAATTGAATTTCA 59.003 36.000 0.00 0.00 0.00 2.69
2385 2688 6.485984 CCATCCAACCACAAATTGAATTTCAA 59.514 34.615 13.88 13.88 41.09 2.69
2386 2689 7.308109 CCATCCAACCACAAATTGAATTTCAAG 60.308 37.037 16.34 6.64 40.05 3.02
2387 2690 6.882656 TCCAACCACAAATTGAATTTCAAGA 58.117 32.000 16.34 2.91 40.05 3.02
2388 2691 6.760770 TCCAACCACAAATTGAATTTCAAGAC 59.239 34.615 16.34 0.00 40.05 3.01
2389 2692 6.762661 CCAACCACAAATTGAATTTCAAGACT 59.237 34.615 16.34 2.42 40.05 3.24
2390 2693 7.280652 CCAACCACAAATTGAATTTCAAGACTT 59.719 33.333 16.34 7.72 40.05 3.01
2391 2694 7.775397 ACCACAAATTGAATTTCAAGACTTG 57.225 32.000 16.34 18.30 40.05 3.16
2392 2695 7.330262 ACCACAAATTGAATTTCAAGACTTGT 58.670 30.769 20.40 20.40 40.05 3.16
2393 2696 7.278424 ACCACAAATTGAATTTCAAGACTTGTG 59.722 33.333 30.34 30.34 44.40 3.33
2394 2697 7.492020 CCACAAATTGAATTTCAAGACTTGTGA 59.508 33.333 33.90 12.19 45.69 3.58
2395 2698 8.323140 CACAAATTGAATTTCAAGACTTGTGAC 58.677 33.333 31.73 4.84 45.69 3.67
2396 2699 8.034215 ACAAATTGAATTTCAAGACTTGTGACA 58.966 29.630 22.94 7.04 40.05 3.58
2397 2700 7.992180 AATTGAATTTCAAGACTTGTGACAC 57.008 32.000 16.34 0.00 40.05 3.67
2398 2701 6.757897 TTGAATTTCAAGACTTGTGACACT 57.242 33.333 14.75 0.00 31.83 3.55
2399 2702 6.757897 TGAATTTCAAGACTTGTGACACTT 57.242 33.333 14.75 2.39 0.00 3.16
2400 2703 7.857734 TGAATTTCAAGACTTGTGACACTTA 57.142 32.000 14.75 0.00 0.00 2.24
2401 2704 8.275015 TGAATTTCAAGACTTGTGACACTTAA 57.725 30.769 14.75 0.00 0.00 1.85
2402 2705 8.902806 TGAATTTCAAGACTTGTGACACTTAAT 58.097 29.630 14.75 1.92 0.00 1.40
2408 2711 9.599866 TCAAGACTTGTGACACTTAATATATGG 57.400 33.333 14.75 0.00 0.00 2.74
2409 2712 8.338259 CAAGACTTGTGACACTTAATATATGGC 58.662 37.037 7.05 0.00 0.00 4.40
2410 2713 7.564793 AGACTTGTGACACTTAATATATGGCA 58.435 34.615 7.20 0.00 0.00 4.92
2411 2714 8.213679 AGACTTGTGACACTTAATATATGGCAT 58.786 33.333 4.88 4.88 32.92 4.40
2412 2715 8.752005 ACTTGTGACACTTAATATATGGCATT 57.248 30.769 4.78 0.00 32.92 3.56
2413 2716 8.623903 ACTTGTGACACTTAATATATGGCATTG 58.376 33.333 4.78 0.00 32.92 2.82
2414 2717 7.509141 TGTGACACTTAATATATGGCATTGG 57.491 36.000 4.78 0.00 32.92 3.16
2415 2718 7.059788 TGTGACACTTAATATATGGCATTGGT 58.940 34.615 4.78 0.00 32.92 3.67
2416 2719 7.559533 TGTGACACTTAATATATGGCATTGGTT 59.440 33.333 4.78 0.70 32.92 3.67
2417 2720 8.413229 GTGACACTTAATATATGGCATTGGTTT 58.587 33.333 4.78 0.00 32.92 3.27
2418 2721 8.976353 TGACACTTAATATATGGCATTGGTTTT 58.024 29.630 4.78 0.00 0.00 2.43
2419 2722 9.816354 GACACTTAATATATGGCATTGGTTTTT 57.184 29.630 4.78 0.00 0.00 1.94
2441 2744 7.703058 TTTTGGAAGAAAAGAAGAACAGTCT 57.297 32.000 0.00 0.00 34.72 3.24
2442 2745 6.683974 TTGGAAGAAAAGAAGAACAGTCTG 57.316 37.500 0.00 0.00 33.05 3.51
2443 2746 5.126067 TGGAAGAAAAGAAGAACAGTCTGG 58.874 41.667 4.53 0.00 33.05 3.86
2444 2747 5.104527 TGGAAGAAAAGAAGAACAGTCTGGA 60.105 40.000 4.53 0.00 33.05 3.86
2445 2748 6.000840 GGAAGAAAAGAAGAACAGTCTGGAT 58.999 40.000 4.53 0.00 33.05 3.41
2446 2749 6.488344 GGAAGAAAAGAAGAACAGTCTGGATT 59.512 38.462 4.53 0.00 33.05 3.01
2447 2750 6.874288 AGAAAAGAAGAACAGTCTGGATTG 57.126 37.500 4.53 0.00 33.05 2.67
2448 2751 6.360618 AGAAAAGAAGAACAGTCTGGATTGT 58.639 36.000 4.53 0.00 33.05 2.71
2449 2752 6.261826 AGAAAAGAAGAACAGTCTGGATTGTG 59.738 38.462 4.53 0.00 33.05 3.33
2450 2753 3.406764 AGAAGAACAGTCTGGATTGTGC 58.593 45.455 4.53 0.00 33.05 4.57
2451 2754 2.191128 AGAACAGTCTGGATTGTGCC 57.809 50.000 4.53 0.00 31.39 5.01
2452 2755 1.701847 AGAACAGTCTGGATTGTGCCT 59.298 47.619 4.53 0.00 31.39 4.75
2453 2756 2.906389 AGAACAGTCTGGATTGTGCCTA 59.094 45.455 4.53 0.00 31.39 3.93
2454 2757 3.521126 AGAACAGTCTGGATTGTGCCTAT 59.479 43.478 4.53 0.00 31.39 2.57
2455 2758 3.550437 ACAGTCTGGATTGTGCCTATC 57.450 47.619 4.53 0.00 29.74 2.08
2456 2759 2.840038 ACAGTCTGGATTGTGCCTATCA 59.160 45.455 4.53 0.00 29.74 2.15
2457 2760 3.264193 ACAGTCTGGATTGTGCCTATCAA 59.736 43.478 4.53 0.00 29.74 2.57
2458 2761 3.624861 CAGTCTGGATTGTGCCTATCAAC 59.375 47.826 0.00 0.00 0.00 3.18
2459 2762 3.264193 AGTCTGGATTGTGCCTATCAACA 59.736 43.478 0.00 0.00 0.00 3.33
2460 2763 4.009675 GTCTGGATTGTGCCTATCAACAA 58.990 43.478 0.00 0.00 0.00 2.83
2461 2764 4.641989 GTCTGGATTGTGCCTATCAACAAT 59.358 41.667 0.89 0.89 35.76 2.71
2462 2765 5.126061 GTCTGGATTGTGCCTATCAACAATT 59.874 40.000 2.84 0.00 33.54 2.32
2463 2766 5.716228 TCTGGATTGTGCCTATCAACAATTT 59.284 36.000 2.84 0.00 33.54 1.82
2464 2767 5.964758 TGGATTGTGCCTATCAACAATTTC 58.035 37.500 2.84 0.90 33.54 2.17
2465 2768 5.036737 GGATTGTGCCTATCAACAATTTCG 58.963 41.667 2.84 0.00 33.54 3.46
2466 2769 5.163663 GGATTGTGCCTATCAACAATTTCGA 60.164 40.000 2.84 0.00 33.54 3.71
2467 2770 4.678509 TGTGCCTATCAACAATTTCGAC 57.321 40.909 0.00 0.00 0.00 4.20
2468 2771 3.438781 TGTGCCTATCAACAATTTCGACC 59.561 43.478 0.00 0.00 0.00 4.79
2469 2772 3.689649 GTGCCTATCAACAATTTCGACCT 59.310 43.478 0.00 0.00 0.00 3.85
2470 2773 3.689161 TGCCTATCAACAATTTCGACCTG 59.311 43.478 0.00 0.00 0.00 4.00
2471 2774 3.689649 GCCTATCAACAATTTCGACCTGT 59.310 43.478 0.00 0.00 0.00 4.00
2472 2775 4.156008 GCCTATCAACAATTTCGACCTGTT 59.844 41.667 0.00 0.00 33.62 3.16
2473 2776 5.673818 GCCTATCAACAATTTCGACCTGTTC 60.674 44.000 3.59 0.00 30.99 3.18
2474 2777 5.643777 CCTATCAACAATTTCGACCTGTTCT 59.356 40.000 3.59 0.00 30.99 3.01
2475 2778 6.816640 CCTATCAACAATTTCGACCTGTTCTA 59.183 38.462 3.59 0.00 30.99 2.10
2476 2779 6.727824 ATCAACAATTTCGACCTGTTCTAG 57.272 37.500 3.59 0.00 30.99 2.43
2477 2780 5.607477 TCAACAATTTCGACCTGTTCTAGT 58.393 37.500 3.59 0.00 30.99 2.57
2478 2781 5.465390 TCAACAATTTCGACCTGTTCTAGTG 59.535 40.000 3.59 0.00 30.99 2.74
2479 2782 5.209818 ACAATTTCGACCTGTTCTAGTGA 57.790 39.130 0.00 0.00 0.00 3.41
2480 2783 5.607477 ACAATTTCGACCTGTTCTAGTGAA 58.393 37.500 0.00 0.00 0.00 3.18
2481 2784 6.053005 ACAATTTCGACCTGTTCTAGTGAAA 58.947 36.000 0.00 0.00 33.52 2.69
2482 2785 6.710744 ACAATTTCGACCTGTTCTAGTGAAAT 59.289 34.615 0.00 0.00 34.79 2.17
2483 2786 7.876068 ACAATTTCGACCTGTTCTAGTGAAATA 59.124 33.333 0.00 0.00 33.46 1.40
2484 2787 7.829378 ATTTCGACCTGTTCTAGTGAAATAC 57.171 36.000 0.00 0.00 33.14 1.89
2485 2788 6.585695 TTCGACCTGTTCTAGTGAAATACT 57.414 37.500 0.00 0.00 43.56 2.12
2486 2789 6.192234 TCGACCTGTTCTAGTGAAATACTC 57.808 41.667 0.00 0.00 40.89 2.59
2487 2790 5.708697 TCGACCTGTTCTAGTGAAATACTCA 59.291 40.000 0.00 0.00 40.89 3.41
2488 2791 6.377429 TCGACCTGTTCTAGTGAAATACTCAT 59.623 38.462 0.00 0.00 40.89 2.90
2489 2792 6.473778 CGACCTGTTCTAGTGAAATACTCATG 59.526 42.308 0.00 0.00 40.89 3.07
2490 2793 7.246171 ACCTGTTCTAGTGAAATACTCATGT 57.754 36.000 0.00 0.00 40.89 3.21
2491 2794 7.680730 ACCTGTTCTAGTGAAATACTCATGTT 58.319 34.615 0.00 0.00 40.89 2.71
2492 2795 7.604164 ACCTGTTCTAGTGAAATACTCATGTTG 59.396 37.037 0.00 0.00 40.89 3.33
2493 2796 7.364522 TGTTCTAGTGAAATACTCATGTTGC 57.635 36.000 0.00 0.00 40.89 4.17
2494 2797 7.161404 TGTTCTAGTGAAATACTCATGTTGCT 58.839 34.615 0.00 0.00 40.89 3.91
2495 2798 7.661437 TGTTCTAGTGAAATACTCATGTTGCTT 59.339 33.333 0.00 0.00 40.89 3.91
2496 2799 8.507249 GTTCTAGTGAAATACTCATGTTGCTTT 58.493 33.333 0.00 0.00 40.89 3.51
2497 2800 8.032952 TCTAGTGAAATACTCATGTTGCTTTG 57.967 34.615 0.00 0.00 40.89 2.77
2498 2801 6.017400 AGTGAAATACTCATGTTGCTTTGG 57.983 37.500 0.00 0.00 36.14 3.28
2499 2802 4.622740 GTGAAATACTCATGTTGCTTTGGC 59.377 41.667 0.00 0.00 36.14 4.52
2500 2803 4.523943 TGAAATACTCATGTTGCTTTGGCT 59.476 37.500 0.00 0.00 39.59 4.75
2501 2804 4.445452 AATACTCATGTTGCTTTGGCTG 57.555 40.909 0.00 0.00 39.59 4.85
2502 2805 0.963962 ACTCATGTTGCTTTGGCTGG 59.036 50.000 0.00 0.00 39.59 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.142026 GGCAAACCCACAAACTACTCTTTT 60.142 41.667 0.00 0.00 0.00 2.27
41 42 1.842381 AAGTGGGGAAGAAGGCGAGG 61.842 60.000 0.00 0.00 0.00 4.63
45 46 1.618837 GGAAAAAGTGGGGAAGAAGGC 59.381 52.381 0.00 0.00 0.00 4.35
58 59 0.393944 GGGGGCCTACGAGGAAAAAG 60.394 60.000 0.84 0.00 37.67 2.27
151 152 2.363680 TGTTGATGCGGGATGTGTTTTT 59.636 40.909 0.00 0.00 0.00 1.94
160 161 0.036858 TTGATCGTGTTGATGCGGGA 60.037 50.000 0.00 0.00 37.47 5.14
172 173 8.562892 GGTTGAGATTTGATATGATTTGATCGT 58.437 33.333 0.00 0.00 0.00 3.73
188 189 8.699130 AGAGAAGTTTTGATTTGGTTGAGATTT 58.301 29.630 0.00 0.00 0.00 2.17
198 199 5.693555 GGAAGGCAAGAGAAGTTTTGATTTG 59.306 40.000 0.00 0.00 0.00 2.32
213 214 5.871396 TGAGTATAAGTAGGGAAGGCAAG 57.129 43.478 0.00 0.00 0.00 4.01
278 282 8.494433 TGATTATAAGTAGGTGAAAGCAAGGAT 58.506 33.333 0.00 0.00 36.26 3.24
311 315 9.614269 AGGGGGTATGTTTTTGCAATATATTAT 57.386 29.630 0.00 0.00 0.00 1.28
312 316 9.084533 GAGGGGGTATGTTTTTGCAATATATTA 57.915 33.333 0.00 0.00 0.00 0.98
313 317 7.789349 AGAGGGGGTATGTTTTTGCAATATATT 59.211 33.333 0.00 0.00 0.00 1.28
314 318 7.233348 CAGAGGGGGTATGTTTTTGCAATATAT 59.767 37.037 0.00 0.00 0.00 0.86
335 340 3.437845 CGTTTTTGACACGCAGAGG 57.562 52.632 0.00 0.00 0.00 3.69
348 353 5.235516 CGTCCCATTATATAGGAGCGTTTT 58.764 41.667 0.00 0.00 0.00 2.43
418 423 2.766313 GCGTATGCCTTACATCCATCA 58.234 47.619 0.00 0.00 40.38 3.07
436 441 1.328680 CAACATCAATCTTCTCCGGCG 59.671 52.381 0.00 0.00 0.00 6.46
438 443 5.118990 ACATACAACATCAATCTTCTCCGG 58.881 41.667 0.00 0.00 0.00 5.14
441 446 6.237942 CGTGGACATACAACATCAATCTTCTC 60.238 42.308 0.00 0.00 0.00 2.87
454 459 0.871722 GTTGCAGCGTGGACATACAA 59.128 50.000 0.00 0.00 0.00 2.41
469 474 7.584987 AGACTAATTAATTATCCATGCGTTGC 58.415 34.615 8.34 0.00 0.00 4.17
534 539 4.142600 GCTTTTTCTATGCGGACAGTGATT 60.143 41.667 0.00 0.00 0.00 2.57
538 543 2.778299 TGCTTTTTCTATGCGGACAGT 58.222 42.857 0.00 0.00 0.00 3.55
541 546 2.095263 TGCTTGCTTTTTCTATGCGGAC 60.095 45.455 0.00 0.00 0.00 4.79
545 550 6.453396 CGAGAAATTGCTTGCTTTTTCTATGC 60.453 38.462 16.85 8.97 38.25 3.14
546 551 6.034256 CCGAGAAATTGCTTGCTTTTTCTATG 59.966 38.462 16.85 13.73 38.25 2.23
567 576 1.278637 GTGACAACGTTTGCCCGAG 59.721 57.895 0.00 0.00 0.00 4.63
581 590 2.178912 TTTCCAGATCAACCCGTGAC 57.821 50.000 0.00 0.00 39.72 3.67
664 674 1.547372 ACCCAAGCATTCAGAACATGC 59.453 47.619 1.00 1.00 46.39 4.06
665 675 2.821378 TCACCCAAGCATTCAGAACATG 59.179 45.455 0.00 0.00 0.00 3.21
666 676 3.159213 TCACCCAAGCATTCAGAACAT 57.841 42.857 0.00 0.00 0.00 2.71
667 677 2.655090 TCACCCAAGCATTCAGAACA 57.345 45.000 0.00 0.00 0.00 3.18
668 678 5.841957 ATTATCACCCAAGCATTCAGAAC 57.158 39.130 0.00 0.00 0.00 3.01
669 679 7.953005 TTAATTATCACCCAAGCATTCAGAA 57.047 32.000 0.00 0.00 0.00 3.02
670 680 7.041167 CGATTAATTATCACCCAAGCATTCAGA 60.041 37.037 0.00 0.00 32.45 3.27
671 681 7.080099 CGATTAATTATCACCCAAGCATTCAG 58.920 38.462 0.00 0.00 32.45 3.02
672 682 6.016360 CCGATTAATTATCACCCAAGCATTCA 60.016 38.462 0.00 0.00 32.45 2.57
673 683 6.381801 CCGATTAATTATCACCCAAGCATTC 58.618 40.000 0.00 0.00 32.45 2.67
674 684 5.243730 CCCGATTAATTATCACCCAAGCATT 59.756 40.000 0.00 0.00 32.45 3.56
675 685 4.766891 CCCGATTAATTATCACCCAAGCAT 59.233 41.667 0.00 0.00 32.45 3.79
676 686 4.141287 CCCGATTAATTATCACCCAAGCA 58.859 43.478 0.00 0.00 32.45 3.91
677 687 3.057526 GCCCGATTAATTATCACCCAAGC 60.058 47.826 0.00 0.00 32.45 4.01
678 688 3.188460 CGCCCGATTAATTATCACCCAAG 59.812 47.826 0.00 0.00 32.45 3.61
679 689 3.142951 CGCCCGATTAATTATCACCCAA 58.857 45.455 0.00 0.00 32.45 4.12
680 690 2.105134 ACGCCCGATTAATTATCACCCA 59.895 45.455 0.00 0.00 32.45 4.51
681 691 2.774687 ACGCCCGATTAATTATCACCC 58.225 47.619 0.00 0.00 32.45 4.61
719 729 2.667724 GCCGTCGATAATTCTACCCGAG 60.668 54.545 0.00 0.00 0.00 4.63
720 730 1.267806 GCCGTCGATAATTCTACCCGA 59.732 52.381 0.00 0.00 0.00 5.14
721 731 1.668047 GGCCGTCGATAATTCTACCCG 60.668 57.143 0.00 0.00 0.00 5.28
722 732 1.668047 CGGCCGTCGATAATTCTACCC 60.668 57.143 19.50 0.00 42.43 3.69
723 733 1.668047 CCGGCCGTCGATAATTCTACC 60.668 57.143 26.12 0.00 42.43 3.18
936 1054 1.271934 CTGTGTCTCTGGTCTGGTCTG 59.728 57.143 0.00 0.00 0.00 3.51
937 1055 1.145945 TCTGTGTCTCTGGTCTGGTCT 59.854 52.381 0.00 0.00 0.00 3.85
938 1056 1.543802 CTCTGTGTCTCTGGTCTGGTC 59.456 57.143 0.00 0.00 0.00 4.02
939 1057 1.626686 CTCTGTGTCTCTGGTCTGGT 58.373 55.000 0.00 0.00 0.00 4.00
940 1058 0.246086 GCTCTGTGTCTCTGGTCTGG 59.754 60.000 0.00 0.00 0.00 3.86
975 1093 2.122768 GGTTGGTGATGATCTCCCTCT 58.877 52.381 10.72 0.00 0.00 3.69
976 1094 1.202580 CGGTTGGTGATGATCTCCCTC 60.203 57.143 10.72 4.30 0.00 4.30
977 1095 0.833287 CGGTTGGTGATGATCTCCCT 59.167 55.000 10.72 0.00 0.00 4.20
980 1098 1.207089 TGGTCGGTTGGTGATGATCTC 59.793 52.381 0.00 0.00 0.00 2.75
983 1101 1.281867 ACATGGTCGGTTGGTGATGAT 59.718 47.619 0.00 0.00 0.00 2.45
984 1102 0.690192 ACATGGTCGGTTGGTGATGA 59.310 50.000 0.00 0.00 0.00 2.92
985 1103 1.086696 GACATGGTCGGTTGGTGATG 58.913 55.000 0.00 0.00 0.00 3.07
1026 1144 4.488136 TTGCAGCCGGATCCGCAT 62.488 61.111 29.12 15.91 38.24 4.73
1084 1202 0.537188 GAACGCAGGATCAGGAGGAA 59.463 55.000 0.00 0.00 0.00 3.36
1110 1232 5.661056 TGAGAAAGAAGGCTAAAGATCGA 57.339 39.130 0.00 0.00 0.00 3.59
1173 1296 2.009625 GACGTGCATGTCGTTAGGCG 62.010 60.000 22.57 3.86 41.64 5.52
1182 1312 0.461548 AGATCGATGGACGTGCATGT 59.538 50.000 28.10 12.38 43.13 3.21
1189 1319 2.225491 GAGAAGAGGAGATCGATGGACG 59.775 54.545 0.54 0.00 44.09 4.79
1220 1350 7.039293 TGCGCATCTCTTAATTTATAGGGAGTA 60.039 37.037 5.66 0.00 0.00 2.59
1222 1352 6.166279 TGCGCATCTCTTAATTTATAGGGAG 58.834 40.000 5.66 0.00 0.00 4.30
1223 1353 6.109156 TGCGCATCTCTTAATTTATAGGGA 57.891 37.500 5.66 0.00 0.00 4.20
1225 1355 7.601073 TCATGCGCATCTCTTAATTTATAGG 57.399 36.000 22.51 3.21 0.00 2.57
1226 1356 8.498358 TGTTCATGCGCATCTCTTAATTTATAG 58.502 33.333 22.51 3.93 0.00 1.31
1227 1357 8.376889 TGTTCATGCGCATCTCTTAATTTATA 57.623 30.769 22.51 0.00 0.00 0.98
1228 1358 7.263100 TGTTCATGCGCATCTCTTAATTTAT 57.737 32.000 22.51 0.00 0.00 1.40
1246 1376 3.290710 ACAGACAAACAGGCTTGTTCAT 58.709 40.909 15.21 6.02 46.54 2.57
1254 1384 2.808543 AGAAATCGACAGACAAACAGGC 59.191 45.455 0.00 0.00 0.00 4.85
1255 1385 4.319766 CCAAGAAATCGACAGACAAACAGG 60.320 45.833 0.00 0.00 0.00 4.00
1290 1486 2.288961 TCGCGATTAACAAGGACTCC 57.711 50.000 3.71 0.00 0.00 3.85
1305 1504 5.618395 CACAAGACAATCATTATCAATCGCG 59.382 40.000 0.00 0.00 0.00 5.87
1307 1506 6.488817 TGCACAAGACAATCATTATCAATCG 58.511 36.000 0.00 0.00 0.00 3.34
1454 1678 4.992740 TTGGGGCCGCACTTGCAT 62.993 61.111 24.08 0.00 42.21 3.96
1515 1750 0.904865 TCCATGGCGTCTCCTTGTCT 60.905 55.000 6.96 0.00 38.09 3.41
1526 1766 3.094062 ATCAGGTCCGTCCATGGCG 62.094 63.158 18.11 18.11 39.02 5.69
1528 1768 0.541392 TTCATCAGGTCCGTCCATGG 59.459 55.000 4.97 4.97 39.02 3.66
1535 1775 0.460987 GTGCTCCTTCATCAGGTCCG 60.461 60.000 0.00 0.00 44.37 4.79
1559 1799 3.574614 GAAACACACACCATGCATAACC 58.425 45.455 0.00 0.00 0.00 2.85
1607 1866 4.181578 TCGATACGATGCGATAGATCTCA 58.818 43.478 0.00 0.00 39.76 3.27
1619 1888 3.747010 ACTACTAGTGGCTCGATACGATG 59.253 47.826 5.39 0.00 34.61 3.84
1632 1901 4.740205 CACATACGCCATGAACTACTAGTG 59.260 45.833 5.39 0.00 38.10 2.74
1633 1902 4.401519 ACACATACGCCATGAACTACTAGT 59.598 41.667 0.00 0.00 38.10 2.57
1634 1903 4.740205 CACACATACGCCATGAACTACTAG 59.260 45.833 0.00 0.00 38.10 2.57
1635 1904 4.678622 CACACATACGCCATGAACTACTA 58.321 43.478 0.00 0.00 38.10 1.82
1636 1905 3.521560 CACACATACGCCATGAACTACT 58.478 45.455 0.00 0.00 38.10 2.57
1637 1906 2.030457 GCACACATACGCCATGAACTAC 59.970 50.000 0.00 0.00 38.10 2.73
1648 1917 1.305219 CCACAAGGGGCACACATACG 61.305 60.000 0.00 0.00 0.00 3.06
1649 1918 2.566824 CCACAAGGGGCACACATAC 58.433 57.895 0.00 0.00 0.00 2.39
1700 1978 2.192664 TAGGAAAAGGCGCATCACAA 57.807 45.000 10.83 0.00 0.00 3.33
1725 2005 1.153549 GCACACCAGGACGGATCTC 60.154 63.158 0.00 0.00 38.63 2.75
1728 2008 2.185310 GAAGGCACACCAGGACGGAT 62.185 60.000 0.00 0.00 39.06 4.18
1738 2018 0.252197 ATAAGACGGGGAAGGCACAC 59.748 55.000 0.00 0.00 0.00 3.82
1743 2023 4.153411 AGATGTAGATAAGACGGGGAAGG 58.847 47.826 0.00 0.00 0.00 3.46
1744 2024 5.768662 TGTAGATGTAGATAAGACGGGGAAG 59.231 44.000 0.00 0.00 0.00 3.46
1745 2025 5.698104 TGTAGATGTAGATAAGACGGGGAA 58.302 41.667 0.00 0.00 0.00 3.97
1746 2026 5.314718 TGTAGATGTAGATAAGACGGGGA 57.685 43.478 0.00 0.00 0.00 4.81
1747 2027 5.477291 ACATGTAGATGTAGATAAGACGGGG 59.523 44.000 3.19 0.00 41.27 5.73
1814 2094 4.080863 TGGCACCACACATACACATACATA 60.081 41.667 0.00 0.00 0.00 2.29
1819 2099 1.825090 CTGGCACCACACATACACAT 58.175 50.000 0.00 0.00 0.00 3.21
1821 2101 0.606401 AGCTGGCACCACACATACAC 60.606 55.000 0.00 0.00 0.00 2.90
1823 2103 0.036010 AGAGCTGGCACCACACATAC 60.036 55.000 0.00 0.00 0.00 2.39
1849 2139 5.777802 TGTGCAGAAGAACAAACAGAAAAA 58.222 33.333 0.00 0.00 27.50 1.94
1869 2159 3.016736 AGGGAATCGCCATTTACTTGTG 58.983 45.455 0.00 0.00 38.95 3.33
1870 2160 3.366052 AGGGAATCGCCATTTACTTGT 57.634 42.857 0.00 0.00 38.95 3.16
1914 2211 6.127647 GGAGTTGATTTGAGTTGCCATATTCA 60.128 38.462 0.00 0.00 0.00 2.57
1915 2212 6.268566 GGAGTTGATTTGAGTTGCCATATTC 58.731 40.000 0.00 0.00 0.00 1.75
1924 2223 3.903530 AAGGGGGAGTTGATTTGAGTT 57.096 42.857 0.00 0.00 0.00 3.01
1937 2236 5.104652 GCATCTAGTACAACTAAAAGGGGGA 60.105 44.000 0.00 0.00 29.00 4.81
1938 2237 5.104485 AGCATCTAGTACAACTAAAAGGGGG 60.104 44.000 0.00 0.00 29.00 5.40
1943 2242 7.762615 ACGCATAAGCATCTAGTACAACTAAAA 59.237 33.333 0.00 0.00 42.27 1.52
1944 2243 7.262772 ACGCATAAGCATCTAGTACAACTAAA 58.737 34.615 0.00 0.00 42.27 1.85
1947 2246 5.263968 ACGCATAAGCATCTAGTACAACT 57.736 39.130 0.00 0.00 42.27 3.16
1950 2253 5.299531 AGAGAACGCATAAGCATCTAGTACA 59.700 40.000 0.00 0.00 42.27 2.90
2018 2321 8.539770 AGAGCGTTATCAAGTCCATTATTATG 57.460 34.615 0.00 0.00 0.00 1.90
2021 2324 9.209175 GATTAGAGCGTTATCAAGTCCATTATT 57.791 33.333 0.00 0.00 0.00 1.40
2022 2325 8.367911 TGATTAGAGCGTTATCAAGTCCATTAT 58.632 33.333 0.00 0.00 0.00 1.28
2023 2326 7.722363 TGATTAGAGCGTTATCAAGTCCATTA 58.278 34.615 0.00 0.00 0.00 1.90
2024 2327 6.582636 TGATTAGAGCGTTATCAAGTCCATT 58.417 36.000 0.00 0.00 0.00 3.16
2025 2328 6.161855 TGATTAGAGCGTTATCAAGTCCAT 57.838 37.500 0.00 0.00 0.00 3.41
2026 2329 5.592104 TGATTAGAGCGTTATCAAGTCCA 57.408 39.130 0.00 0.00 0.00 4.02
2027 2330 7.011482 ACAATTGATTAGAGCGTTATCAAGTCC 59.989 37.037 13.59 0.00 40.45 3.85
2028 2331 7.910304 ACAATTGATTAGAGCGTTATCAAGTC 58.090 34.615 13.59 0.00 40.45 3.01
2029 2332 7.849804 ACAATTGATTAGAGCGTTATCAAGT 57.150 32.000 13.59 4.60 40.45 3.16
2030 2333 9.003112 CAAACAATTGATTAGAGCGTTATCAAG 57.997 33.333 13.59 1.52 40.45 3.02
2031 2334 8.511321 ACAAACAATTGATTAGAGCGTTATCAA 58.489 29.630 13.59 6.15 41.12 2.57
2032 2335 8.039603 ACAAACAATTGATTAGAGCGTTATCA 57.960 30.769 13.59 0.00 38.94 2.15
2033 2336 8.895932 AACAAACAATTGATTAGAGCGTTATC 57.104 30.769 13.59 0.00 38.94 1.75
2034 2337 9.128107 CAAACAAACAATTGATTAGAGCGTTAT 57.872 29.630 13.59 0.00 38.94 1.89
2035 2338 8.132362 ACAAACAAACAATTGATTAGAGCGTTA 58.868 29.630 13.59 0.00 38.94 3.18
2036 2339 6.978080 ACAAACAAACAATTGATTAGAGCGTT 59.022 30.769 13.59 4.03 38.94 4.84
2037 2340 6.503524 ACAAACAAACAATTGATTAGAGCGT 58.496 32.000 13.59 0.00 38.94 5.07
2038 2341 6.991485 ACAAACAAACAATTGATTAGAGCG 57.009 33.333 13.59 0.00 38.94 5.03
2039 2342 9.243637 TGTAACAAACAAACAATTGATTAGAGC 57.756 29.630 13.59 0.00 38.94 4.09
2055 2358 7.112122 AGCCATCATCTCTATTGTAACAAACA 58.888 34.615 0.00 0.00 35.88 2.83
2056 2359 7.559590 AGCCATCATCTCTATTGTAACAAAC 57.440 36.000 0.00 0.00 0.00 2.93
2057 2360 9.679661 TTTAGCCATCATCTCTATTGTAACAAA 57.320 29.630 0.00 0.00 0.00 2.83
2058 2361 9.851686 ATTTAGCCATCATCTCTATTGTAACAA 57.148 29.630 0.00 0.00 0.00 2.83
2059 2362 9.276590 CATTTAGCCATCATCTCTATTGTAACA 57.723 33.333 0.00 0.00 0.00 2.41
2060 2363 9.277783 ACATTTAGCCATCATCTCTATTGTAAC 57.722 33.333 0.00 0.00 0.00 2.50
2061 2364 9.276590 CACATTTAGCCATCATCTCTATTGTAA 57.723 33.333 0.00 0.00 0.00 2.41
2062 2365 8.432013 ACACATTTAGCCATCATCTCTATTGTA 58.568 33.333 0.00 0.00 0.00 2.41
2063 2366 7.285566 ACACATTTAGCCATCATCTCTATTGT 58.714 34.615 0.00 0.00 0.00 2.71
2064 2367 7.660617 AGACACATTTAGCCATCATCTCTATTG 59.339 37.037 0.00 0.00 0.00 1.90
2065 2368 7.743749 AGACACATTTAGCCATCATCTCTATT 58.256 34.615 0.00 0.00 0.00 1.73
2066 2369 7.313740 AGACACATTTAGCCATCATCTCTAT 57.686 36.000 0.00 0.00 0.00 1.98
2067 2370 6.737720 AGACACATTTAGCCATCATCTCTA 57.262 37.500 0.00 0.00 0.00 2.43
2068 2371 5.627182 AGACACATTTAGCCATCATCTCT 57.373 39.130 0.00 0.00 0.00 3.10
2069 2372 6.690194 AAAGACACATTTAGCCATCATCTC 57.310 37.500 0.00 0.00 0.00 2.75
2070 2373 7.568349 TCTAAAGACACATTTAGCCATCATCT 58.432 34.615 2.13 0.00 40.86 2.90
2071 2374 7.792374 TCTAAAGACACATTTAGCCATCATC 57.208 36.000 2.13 0.00 40.86 2.92
2072 2375 7.994911 TGATCTAAAGACACATTTAGCCATCAT 59.005 33.333 0.00 0.00 40.86 2.45
2073 2376 7.337938 TGATCTAAAGACACATTTAGCCATCA 58.662 34.615 0.00 4.67 40.86 3.07
2074 2377 7.792374 TGATCTAAAGACACATTTAGCCATC 57.208 36.000 0.00 2.64 40.86 3.51
2075 2378 8.579850 TTTGATCTAAAGACACATTTAGCCAT 57.420 30.769 0.00 0.00 40.86 4.40
2076 2379 7.994425 TTTGATCTAAAGACACATTTAGCCA 57.006 32.000 0.00 1.13 40.86 4.75
2077 2380 8.677300 TGATTTGATCTAAAGACACATTTAGCC 58.323 33.333 0.00 0.00 40.86 3.93
2081 2384 9.903682 CAGTTGATTTGATCTAAAGACACATTT 57.096 29.630 0.00 0.00 0.00 2.32
2082 2385 8.517878 CCAGTTGATTTGATCTAAAGACACATT 58.482 33.333 0.00 0.00 0.00 2.71
2083 2386 7.121759 CCCAGTTGATTTGATCTAAAGACACAT 59.878 37.037 0.00 0.00 0.00 3.21
2084 2387 6.430925 CCCAGTTGATTTGATCTAAAGACACA 59.569 38.462 0.00 0.00 0.00 3.72
2085 2388 6.431234 ACCCAGTTGATTTGATCTAAAGACAC 59.569 38.462 0.00 0.00 0.00 3.67
2086 2389 6.542821 ACCCAGTTGATTTGATCTAAAGACA 58.457 36.000 0.00 0.00 0.00 3.41
2087 2390 7.454260 AACCCAGTTGATTTGATCTAAAGAC 57.546 36.000 0.00 0.00 0.00 3.01
2088 2391 9.581289 TTAAACCCAGTTGATTTGATCTAAAGA 57.419 29.630 0.00 0.00 0.00 2.52
2090 2393 9.974980 GTTTAAACCCAGTTGATTTGATCTAAA 57.025 29.630 7.12 0.00 0.00 1.85
2091 2394 9.137459 TGTTTAAACCCAGTTGATTTGATCTAA 57.863 29.630 15.59 0.00 0.00 2.10
2092 2395 8.698973 TGTTTAAACCCAGTTGATTTGATCTA 57.301 30.769 15.59 0.00 0.00 1.98
2093 2396 7.595819 TGTTTAAACCCAGTTGATTTGATCT 57.404 32.000 15.59 0.00 0.00 2.75
2094 2397 7.926018 ACTTGTTTAAACCCAGTTGATTTGATC 59.074 33.333 15.59 0.00 0.00 2.92
2095 2398 7.791029 ACTTGTTTAAACCCAGTTGATTTGAT 58.209 30.769 15.59 0.00 0.00 2.57
2096 2399 7.176589 ACTTGTTTAAACCCAGTTGATTTGA 57.823 32.000 15.59 0.00 0.00 2.69
2097 2400 7.841915 AACTTGTTTAAACCCAGTTGATTTG 57.158 32.000 22.85 0.81 32.96 2.32
2098 2401 8.318412 AGAAACTTGTTTAAACCCAGTTGATTT 58.682 29.630 23.64 13.86 33.89 2.17
2099 2402 7.847096 AGAAACTTGTTTAAACCCAGTTGATT 58.153 30.769 23.64 14.11 33.89 2.57
2100 2403 7.418337 AGAAACTTGTTTAAACCCAGTTGAT 57.582 32.000 23.64 16.31 33.89 2.57
2101 2404 6.844097 AGAAACTTGTTTAAACCCAGTTGA 57.156 33.333 23.64 2.00 33.89 3.18
2102 2405 7.600752 TGAAAGAAACTTGTTTAAACCCAGTTG 59.399 33.333 23.64 9.42 33.89 3.16
2103 2406 7.601130 GTGAAAGAAACTTGTTTAAACCCAGTT 59.399 33.333 19.92 19.92 34.62 3.16
2104 2407 7.094631 GTGAAAGAAACTTGTTTAAACCCAGT 58.905 34.615 15.59 13.79 0.00 4.00
2105 2408 6.533723 GGTGAAAGAAACTTGTTTAAACCCAG 59.466 38.462 15.59 13.19 30.40 4.45
2106 2409 6.399743 GGTGAAAGAAACTTGTTTAAACCCA 58.600 36.000 15.59 1.80 30.40 4.51
2107 2410 5.517411 CGGTGAAAGAAACTTGTTTAAACCC 59.483 40.000 15.59 4.00 31.74 4.11
2108 2411 6.324042 TCGGTGAAAGAAACTTGTTTAAACC 58.676 36.000 15.59 0.00 31.93 3.27
2109 2412 6.471198 CCTCGGTGAAAGAAACTTGTTTAAAC 59.529 38.462 11.54 11.54 0.00 2.01
2110 2413 6.557110 CCTCGGTGAAAGAAACTTGTTTAAA 58.443 36.000 0.00 0.00 0.00 1.52
2111 2414 5.449451 GCCTCGGTGAAAGAAACTTGTTTAA 60.449 40.000 0.00 0.00 0.00 1.52
2112 2415 4.035909 GCCTCGGTGAAAGAAACTTGTTTA 59.964 41.667 0.00 0.00 0.00 2.01
2113 2416 3.181490 GCCTCGGTGAAAGAAACTTGTTT 60.181 43.478 0.00 0.00 0.00 2.83
2114 2417 2.357952 GCCTCGGTGAAAGAAACTTGTT 59.642 45.455 0.00 0.00 0.00 2.83
2115 2418 1.947456 GCCTCGGTGAAAGAAACTTGT 59.053 47.619 0.00 0.00 0.00 3.16
2116 2419 1.946768 TGCCTCGGTGAAAGAAACTTG 59.053 47.619 0.00 0.00 0.00 3.16
2117 2420 2.158813 TCTGCCTCGGTGAAAGAAACTT 60.159 45.455 0.00 0.00 0.00 2.66
2118 2421 1.416401 TCTGCCTCGGTGAAAGAAACT 59.584 47.619 0.00 0.00 0.00 2.66
2119 2422 1.878953 TCTGCCTCGGTGAAAGAAAC 58.121 50.000 0.00 0.00 0.00 2.78
2120 2423 2.494059 CTTCTGCCTCGGTGAAAGAAA 58.506 47.619 0.00 0.00 0.00 2.52
2121 2424 1.270839 CCTTCTGCCTCGGTGAAAGAA 60.271 52.381 0.00 0.00 0.00 2.52
2122 2425 0.321671 CCTTCTGCCTCGGTGAAAGA 59.678 55.000 0.00 0.00 0.00 2.52
2123 2426 0.321671 TCCTTCTGCCTCGGTGAAAG 59.678 55.000 0.00 0.00 0.00 2.62
2124 2427 0.762418 TTCCTTCTGCCTCGGTGAAA 59.238 50.000 0.00 0.00 0.00 2.69
2125 2428 0.984230 ATTCCTTCTGCCTCGGTGAA 59.016 50.000 0.00 0.00 0.00 3.18
2126 2429 1.860641 TATTCCTTCTGCCTCGGTGA 58.139 50.000 0.00 0.00 0.00 4.02
2127 2430 2.691409 TTATTCCTTCTGCCTCGGTG 57.309 50.000 0.00 0.00 0.00 4.94
2128 2431 3.713826 TTTTATTCCTTCTGCCTCGGT 57.286 42.857 0.00 0.00 0.00 4.69
2129 2432 5.582550 GAAATTTTATTCCTTCTGCCTCGG 58.417 41.667 0.00 0.00 0.00 4.63
2130 2433 5.266242 CGAAATTTTATTCCTTCTGCCTCG 58.734 41.667 0.00 0.00 0.00 4.63
2131 2434 5.037385 GCGAAATTTTATTCCTTCTGCCTC 58.963 41.667 0.00 0.00 0.00 4.70
2132 2435 4.142160 GGCGAAATTTTATTCCTTCTGCCT 60.142 41.667 0.00 0.00 35.98 4.75
2133 2436 4.112634 GGCGAAATTTTATTCCTTCTGCC 58.887 43.478 0.00 0.00 33.61 4.85
2134 2437 4.562789 GTGGCGAAATTTTATTCCTTCTGC 59.437 41.667 0.00 0.00 0.00 4.26
2135 2438 5.572896 GTGTGGCGAAATTTTATTCCTTCTG 59.427 40.000 0.00 0.00 0.00 3.02
2136 2439 5.336451 GGTGTGGCGAAATTTTATTCCTTCT 60.336 40.000 0.00 0.00 0.00 2.85
2137 2440 4.862574 GGTGTGGCGAAATTTTATTCCTTC 59.137 41.667 0.00 0.00 0.00 3.46
2138 2441 4.526650 AGGTGTGGCGAAATTTTATTCCTT 59.473 37.500 0.00 0.00 0.00 3.36
2139 2442 4.086457 AGGTGTGGCGAAATTTTATTCCT 58.914 39.130 0.00 0.00 0.00 3.36
2140 2443 4.450082 AGGTGTGGCGAAATTTTATTCC 57.550 40.909 0.00 0.00 0.00 3.01
2141 2444 5.025826 CGTAGGTGTGGCGAAATTTTATTC 58.974 41.667 0.00 0.00 0.00 1.75
2142 2445 4.696402 TCGTAGGTGTGGCGAAATTTTATT 59.304 37.500 0.00 0.00 0.00 1.40
2143 2446 4.255301 TCGTAGGTGTGGCGAAATTTTAT 58.745 39.130 0.00 0.00 0.00 1.40
2144 2447 3.661944 TCGTAGGTGTGGCGAAATTTTA 58.338 40.909 0.00 0.00 0.00 1.52
2145 2448 2.496111 TCGTAGGTGTGGCGAAATTTT 58.504 42.857 0.00 0.00 0.00 1.82
2146 2449 2.172851 TCGTAGGTGTGGCGAAATTT 57.827 45.000 0.00 0.00 0.00 1.82
2147 2450 1.802365 GTTCGTAGGTGTGGCGAAATT 59.198 47.619 0.00 0.00 44.46 1.82
2148 2451 1.001633 AGTTCGTAGGTGTGGCGAAAT 59.998 47.619 0.00 0.00 44.46 2.17
2149 2452 0.390124 AGTTCGTAGGTGTGGCGAAA 59.610 50.000 0.00 0.00 44.46 3.46
2150 2453 0.319211 CAGTTCGTAGGTGTGGCGAA 60.319 55.000 0.00 0.00 41.45 4.70
2151 2454 1.174078 TCAGTTCGTAGGTGTGGCGA 61.174 55.000 0.00 0.00 0.00 5.54
2152 2455 0.319211 TTCAGTTCGTAGGTGTGGCG 60.319 55.000 0.00 0.00 0.00 5.69
2153 2456 2.094762 ATTCAGTTCGTAGGTGTGGC 57.905 50.000 0.00 0.00 0.00 5.01
2154 2457 8.433421 AAATTATATTCAGTTCGTAGGTGTGG 57.567 34.615 0.00 0.00 0.00 4.17
2155 2458 9.702726 CAAAATTATATTCAGTTCGTAGGTGTG 57.297 33.333 0.00 0.00 0.00 3.82
2156 2459 9.444600 ACAAAATTATATTCAGTTCGTAGGTGT 57.555 29.630 0.00 0.00 0.00 4.16
2227 2530 4.002982 TGAGCGTCTGCATCTGTATTTTT 58.997 39.130 0.00 0.00 46.23 1.94
2228 2531 3.372206 GTGAGCGTCTGCATCTGTATTTT 59.628 43.478 0.00 0.00 46.23 1.82
2229 2532 2.932614 GTGAGCGTCTGCATCTGTATTT 59.067 45.455 0.00 0.00 46.23 1.40
2230 2533 2.094026 TGTGAGCGTCTGCATCTGTATT 60.094 45.455 0.00 0.00 46.23 1.89
2231 2534 1.478105 TGTGAGCGTCTGCATCTGTAT 59.522 47.619 0.00 0.00 46.23 2.29
2232 2535 0.887933 TGTGAGCGTCTGCATCTGTA 59.112 50.000 0.00 0.00 46.23 2.74
2233 2536 0.668706 GTGTGAGCGTCTGCATCTGT 60.669 55.000 0.00 0.00 46.23 3.41
2234 2537 0.668401 TGTGTGAGCGTCTGCATCTG 60.668 55.000 0.00 0.00 46.23 2.90
2235 2538 0.668706 GTGTGTGAGCGTCTGCATCT 60.669 55.000 0.00 0.00 46.23 2.90
2236 2539 0.945743 TGTGTGTGAGCGTCTGCATC 60.946 55.000 0.00 0.00 46.23 3.91
2237 2540 0.321034 ATGTGTGTGAGCGTCTGCAT 60.321 50.000 0.00 0.00 46.23 3.96
2238 2541 1.069596 ATGTGTGTGAGCGTCTGCA 59.930 52.632 0.00 0.00 46.23 4.41
2239 2542 1.224069 ACATGTGTGTGAGCGTCTGC 61.224 55.000 0.00 0.00 37.14 4.26
2240 2543 1.721389 GTACATGTGTGTGAGCGTCTG 59.279 52.381 9.11 0.00 39.39 3.51
2241 2544 1.339929 TGTACATGTGTGTGAGCGTCT 59.660 47.619 9.11 0.00 39.39 4.18
2242 2545 1.778334 TGTACATGTGTGTGAGCGTC 58.222 50.000 9.11 0.00 39.39 5.19
2243 2546 2.455674 ATGTACATGTGTGTGAGCGT 57.544 45.000 7.78 0.00 39.39 5.07
2244 2547 3.060761 GTGTATGTACATGTGTGTGAGCG 59.939 47.826 18.81 0.00 39.39 5.03
2245 2548 4.245660 AGTGTATGTACATGTGTGTGAGC 58.754 43.478 18.81 0.00 39.39 4.26
2246 2549 5.469479 TGAGTGTATGTACATGTGTGTGAG 58.531 41.667 18.81 0.00 39.39 3.51
2247 2550 5.461032 TGAGTGTATGTACATGTGTGTGA 57.539 39.130 18.81 0.00 39.39 3.58
2248 2551 6.101997 AGATGAGTGTATGTACATGTGTGTG 58.898 40.000 18.81 0.00 39.39 3.82
2249 2552 6.153510 AGAGATGAGTGTATGTACATGTGTGT 59.846 38.462 18.81 0.00 42.39 3.72
2250 2553 6.567959 AGAGATGAGTGTATGTACATGTGTG 58.432 40.000 18.81 0.00 38.63 3.82
2251 2554 6.782082 AGAGATGAGTGTATGTACATGTGT 57.218 37.500 18.81 0.16 38.63 3.72
2252 2555 7.811713 CCATAGAGATGAGTGTATGTACATGTG 59.188 40.741 18.81 0.00 35.34 3.21
2253 2556 7.507277 ACCATAGAGATGAGTGTATGTACATGT 59.493 37.037 18.81 2.69 35.34 3.21
2254 2557 7.890515 ACCATAGAGATGAGTGTATGTACATG 58.109 38.462 18.81 0.00 35.34 3.21
2255 2558 8.484214 AACCATAGAGATGAGTGTATGTACAT 57.516 34.615 13.93 13.93 35.34 2.29
2256 2559 7.898014 AACCATAGAGATGAGTGTATGTACA 57.102 36.000 0.00 0.00 34.73 2.90
2257 2560 9.900710 CTTAACCATAGAGATGAGTGTATGTAC 57.099 37.037 0.00 0.00 34.73 2.90
2258 2561 8.577296 GCTTAACCATAGAGATGAGTGTATGTA 58.423 37.037 0.00 0.00 34.73 2.29
2259 2562 7.437748 GCTTAACCATAGAGATGAGTGTATGT 58.562 38.462 0.00 0.00 34.73 2.29
2260 2563 6.584184 CGCTTAACCATAGAGATGAGTGTATG 59.416 42.308 0.00 0.00 34.73 2.39
2261 2564 6.682746 CGCTTAACCATAGAGATGAGTGTAT 58.317 40.000 0.00 0.00 34.73 2.29
2262 2565 5.507482 GCGCTTAACCATAGAGATGAGTGTA 60.507 44.000 0.00 0.00 34.73 2.90
2263 2566 4.737946 GCGCTTAACCATAGAGATGAGTGT 60.738 45.833 0.00 0.00 34.73 3.55
2264 2567 3.738282 GCGCTTAACCATAGAGATGAGTG 59.262 47.826 0.00 0.00 34.73 3.51
2265 2568 3.384789 TGCGCTTAACCATAGAGATGAGT 59.615 43.478 9.73 0.00 34.73 3.41
2266 2569 3.738282 GTGCGCTTAACCATAGAGATGAG 59.262 47.826 9.73 0.00 34.73 2.90
2267 2570 3.717707 GTGCGCTTAACCATAGAGATGA 58.282 45.455 9.73 0.00 34.73 2.92
2268 2571 2.472861 CGTGCGCTTAACCATAGAGATG 59.527 50.000 9.73 0.00 0.00 2.90
2269 2572 2.743938 CGTGCGCTTAACCATAGAGAT 58.256 47.619 9.73 0.00 0.00 2.75
2270 2573 1.801395 GCGTGCGCTTAACCATAGAGA 60.801 52.381 9.73 0.00 38.26 3.10
2271 2574 0.577269 GCGTGCGCTTAACCATAGAG 59.423 55.000 9.73 0.00 38.26 2.43
2272 2575 1.143373 CGCGTGCGCTTAACCATAGA 61.143 55.000 9.73 0.00 39.32 1.98
2273 2576 1.272715 CGCGTGCGCTTAACCATAG 59.727 57.895 9.73 0.00 39.32 2.23
2274 2577 3.390280 CGCGTGCGCTTAACCATA 58.610 55.556 9.73 0.00 39.32 2.74
2296 2599 1.475213 GCAGGTGCTCATAAGGGTACC 60.475 57.143 2.17 2.17 44.35 3.34
2297 2600 1.806623 CGCAGGTGCTCATAAGGGTAC 60.807 57.143 0.00 0.00 39.32 3.34
2298 2601 0.464036 CGCAGGTGCTCATAAGGGTA 59.536 55.000 0.00 0.00 39.32 3.69
2299 2602 1.221840 CGCAGGTGCTCATAAGGGT 59.778 57.895 0.00 0.00 39.32 4.34
2300 2603 0.531532 CTCGCAGGTGCTCATAAGGG 60.532 60.000 0.00 0.00 39.32 3.95
2301 2604 1.156645 GCTCGCAGGTGCTCATAAGG 61.157 60.000 0.00 0.00 39.32 2.69
2302 2605 1.485838 CGCTCGCAGGTGCTCATAAG 61.486 60.000 0.00 0.00 39.32 1.73
2303 2606 1.519234 CGCTCGCAGGTGCTCATAA 60.519 57.895 0.00 0.00 39.32 1.90
2304 2607 2.104928 CGCTCGCAGGTGCTCATA 59.895 61.111 0.00 0.00 39.32 2.15
2305 2608 3.713205 CTCGCTCGCAGGTGCTCAT 62.713 63.158 0.00 0.00 39.32 2.90
2306 2609 4.426112 CTCGCTCGCAGGTGCTCA 62.426 66.667 0.00 0.00 39.32 4.26
2310 2613 2.357517 AAACCTCGCTCGCAGGTG 60.358 61.111 11.81 0.00 44.03 4.00
2312 2615 1.424493 GATCAAACCTCGCTCGCAGG 61.424 60.000 6.04 6.04 37.03 4.85
2313 2616 1.746727 CGATCAAACCTCGCTCGCAG 61.747 60.000 0.00 0.00 0.00 5.18
2314 2617 1.805539 CGATCAAACCTCGCTCGCA 60.806 57.895 0.00 0.00 0.00 5.10
2315 2618 1.352156 AACGATCAAACCTCGCTCGC 61.352 55.000 0.00 0.00 39.71 5.03
2316 2619 0.366871 CAACGATCAAACCTCGCTCG 59.633 55.000 0.00 0.00 39.71 5.03
2317 2620 0.721718 CCAACGATCAAACCTCGCTC 59.278 55.000 0.00 0.00 39.71 5.03
2318 2621 0.673644 CCCAACGATCAAACCTCGCT 60.674 55.000 0.00 0.00 39.71 4.93
2319 2622 1.644786 CCCCAACGATCAAACCTCGC 61.645 60.000 0.00 0.00 39.71 5.03
2320 2623 1.644786 GCCCCAACGATCAAACCTCG 61.645 60.000 0.00 0.00 41.77 4.63
2321 2624 0.322546 AGCCCCAACGATCAAACCTC 60.323 55.000 0.00 0.00 0.00 3.85
2322 2625 0.609131 CAGCCCCAACGATCAAACCT 60.609 55.000 0.00 0.00 0.00 3.50
2323 2626 1.595093 CCAGCCCCAACGATCAAACC 61.595 60.000 0.00 0.00 0.00 3.27
2324 2627 1.595093 CCCAGCCCCAACGATCAAAC 61.595 60.000 0.00 0.00 0.00 2.93
2325 2628 1.304052 CCCAGCCCCAACGATCAAA 60.304 57.895 0.00 0.00 0.00 2.69
2326 2629 2.354729 CCCAGCCCCAACGATCAA 59.645 61.111 0.00 0.00 0.00 2.57
2327 2630 4.424711 GCCCAGCCCCAACGATCA 62.425 66.667 0.00 0.00 0.00 2.92
2328 2631 2.056906 ATAGCCCAGCCCCAACGATC 62.057 60.000 0.00 0.00 0.00 3.69
2329 2632 2.056906 GATAGCCCAGCCCCAACGAT 62.057 60.000 0.00 0.00 0.00 3.73
2330 2633 2.690881 ATAGCCCAGCCCCAACGA 60.691 61.111 0.00 0.00 0.00 3.85
2331 2634 2.203209 GATAGCCCAGCCCCAACG 60.203 66.667 0.00 0.00 0.00 4.10
2332 2635 1.152881 CAGATAGCCCAGCCCCAAC 60.153 63.158 0.00 0.00 0.00 3.77
2333 2636 3.060614 GCAGATAGCCCAGCCCCAA 62.061 63.158 0.00 0.00 37.23 4.12
2334 2637 3.492353 GCAGATAGCCCAGCCCCA 61.492 66.667 0.00 0.00 37.23 4.96
2343 2646 3.118445 GGATGGATAAGAGGGCAGATAGC 60.118 52.174 0.00 0.00 44.65 2.97
2344 2647 4.099633 TGGATGGATAAGAGGGCAGATAG 58.900 47.826 0.00 0.00 0.00 2.08
2345 2648 4.146245 TGGATGGATAAGAGGGCAGATA 57.854 45.455 0.00 0.00 0.00 1.98
2346 2649 2.995746 TGGATGGATAAGAGGGCAGAT 58.004 47.619 0.00 0.00 0.00 2.90
2347 2650 2.439507 GTTGGATGGATAAGAGGGCAGA 59.560 50.000 0.00 0.00 0.00 4.26
2348 2651 2.487986 GGTTGGATGGATAAGAGGGCAG 60.488 54.545 0.00 0.00 0.00 4.85
2349 2652 1.494721 GGTTGGATGGATAAGAGGGCA 59.505 52.381 0.00 0.00 0.00 5.36
2350 2653 1.494721 TGGTTGGATGGATAAGAGGGC 59.505 52.381 0.00 0.00 0.00 5.19
2351 2654 2.509548 TGTGGTTGGATGGATAAGAGGG 59.490 50.000 0.00 0.00 0.00 4.30
2352 2655 3.931907 TGTGGTTGGATGGATAAGAGG 57.068 47.619 0.00 0.00 0.00 3.69
2353 2656 6.377996 TCAATTTGTGGTTGGATGGATAAGAG 59.622 38.462 0.00 0.00 0.00 2.85
2354 2657 6.252233 TCAATTTGTGGTTGGATGGATAAGA 58.748 36.000 0.00 0.00 0.00 2.10
2355 2658 6.528537 TCAATTTGTGGTTGGATGGATAAG 57.471 37.500 0.00 0.00 0.00 1.73
2356 2659 6.924913 TTCAATTTGTGGTTGGATGGATAA 57.075 33.333 0.00 0.00 0.00 1.75
2357 2660 7.493499 AATTCAATTTGTGGTTGGATGGATA 57.507 32.000 0.00 0.00 0.00 2.59
2358 2661 6.377245 AATTCAATTTGTGGTTGGATGGAT 57.623 33.333 0.00 0.00 0.00 3.41
2359 2662 5.822132 AATTCAATTTGTGGTTGGATGGA 57.178 34.783 0.00 0.00 0.00 3.41
2360 2663 5.996513 TGAAATTCAATTTGTGGTTGGATGG 59.003 36.000 0.00 0.00 31.47 3.51
2361 2664 7.441760 TCTTGAAATTCAATTTGTGGTTGGATG 59.558 33.333 9.02 0.00 35.59 3.51
2362 2665 7.442062 GTCTTGAAATTCAATTTGTGGTTGGAT 59.558 33.333 9.02 0.00 35.59 3.41
2363 2666 6.760770 GTCTTGAAATTCAATTTGTGGTTGGA 59.239 34.615 9.02 0.00 35.59 3.53
2364 2667 6.762661 AGTCTTGAAATTCAATTTGTGGTTGG 59.237 34.615 9.02 0.00 35.59 3.77
2365 2668 7.775397 AGTCTTGAAATTCAATTTGTGGTTG 57.225 32.000 9.02 0.00 35.59 3.77
2366 2669 7.823799 ACAAGTCTTGAAATTCAATTTGTGGTT 59.176 29.630 19.53 7.26 35.73 3.67
2367 2670 7.278424 CACAAGTCTTGAAATTCAATTTGTGGT 59.722 33.333 28.99 16.21 42.04 4.16
2368 2671 7.492020 TCACAAGTCTTGAAATTCAATTTGTGG 59.508 33.333 31.76 23.14 43.55 4.17
2369 2672 8.323140 GTCACAAGTCTTGAAATTCAATTTGTG 58.677 33.333 29.77 29.77 44.01 3.33
2370 2673 8.034215 TGTCACAAGTCTTGAAATTCAATTTGT 58.966 29.630 19.53 18.79 36.58 2.83
2371 2674 8.323140 GTGTCACAAGTCTTGAAATTCAATTTG 58.677 33.333 19.53 14.80 35.59 2.32
2372 2675 8.253113 AGTGTCACAAGTCTTGAAATTCAATTT 58.747 29.630 19.53 0.00 35.59 1.82
2373 2676 7.775120 AGTGTCACAAGTCTTGAAATTCAATT 58.225 30.769 19.53 0.00 35.59 2.32
2374 2677 7.338800 AGTGTCACAAGTCTTGAAATTCAAT 57.661 32.000 19.53 7.20 35.59 2.57
2375 2678 6.757897 AGTGTCACAAGTCTTGAAATTCAA 57.242 33.333 19.53 8.25 34.79 2.69
2376 2679 6.757897 AAGTGTCACAAGTCTTGAAATTCA 57.242 33.333 19.53 7.80 0.00 2.57
2382 2685 9.599866 CCATATATTAAGTGTCACAAGTCTTGA 57.400 33.333 19.53 0.00 0.00 3.02
2383 2686 8.338259 GCCATATATTAAGTGTCACAAGTCTTG 58.662 37.037 11.17 11.17 0.00 3.02
2384 2687 8.046708 TGCCATATATTAAGTGTCACAAGTCTT 58.953 33.333 5.62 0.00 0.00 3.01
2385 2688 7.564793 TGCCATATATTAAGTGTCACAAGTCT 58.435 34.615 5.62 0.00 0.00 3.24
2386 2689 7.786178 TGCCATATATTAAGTGTCACAAGTC 57.214 36.000 5.62 0.00 0.00 3.01
2387 2690 8.623903 CAATGCCATATATTAAGTGTCACAAGT 58.376 33.333 5.62 0.00 0.00 3.16
2388 2691 8.077991 CCAATGCCATATATTAAGTGTCACAAG 58.922 37.037 5.62 0.00 0.00 3.16
2389 2692 7.559533 ACCAATGCCATATATTAAGTGTCACAA 59.440 33.333 5.62 0.00 0.00 3.33
2390 2693 7.059788 ACCAATGCCATATATTAAGTGTCACA 58.940 34.615 5.62 0.00 0.00 3.58
2391 2694 7.510549 ACCAATGCCATATATTAAGTGTCAC 57.489 36.000 0.00 0.00 0.00 3.67
2392 2695 8.532186 AAACCAATGCCATATATTAAGTGTCA 57.468 30.769 0.00 0.00 0.00 3.58
2393 2696 9.816354 AAAAACCAATGCCATATATTAAGTGTC 57.184 29.630 0.00 0.00 0.00 3.67
2416 2719 8.028938 CAGACTGTTCTTCTTTTCTTCCAAAAA 58.971 33.333 0.00 0.00 0.00 1.94
2417 2720 7.362920 CCAGACTGTTCTTCTTTTCTTCCAAAA 60.363 37.037 0.93 0.00 0.00 2.44
2418 2721 6.095440 CCAGACTGTTCTTCTTTTCTTCCAAA 59.905 38.462 0.93 0.00 0.00 3.28
2419 2722 5.590259 CCAGACTGTTCTTCTTTTCTTCCAA 59.410 40.000 0.93 0.00 0.00 3.53
2420 2723 5.104527 TCCAGACTGTTCTTCTTTTCTTCCA 60.105 40.000 0.93 0.00 0.00 3.53
2421 2724 5.368989 TCCAGACTGTTCTTCTTTTCTTCC 58.631 41.667 0.93 0.00 0.00 3.46
2422 2725 7.012799 ACAATCCAGACTGTTCTTCTTTTCTTC 59.987 37.037 0.93 0.00 0.00 2.87
2423 2726 6.830838 ACAATCCAGACTGTTCTTCTTTTCTT 59.169 34.615 0.93 0.00 0.00 2.52
2424 2727 6.261826 CACAATCCAGACTGTTCTTCTTTTCT 59.738 38.462 0.93 0.00 0.00 2.52
2425 2728 6.433766 CACAATCCAGACTGTTCTTCTTTTC 58.566 40.000 0.93 0.00 0.00 2.29
2426 2729 5.221126 GCACAATCCAGACTGTTCTTCTTTT 60.221 40.000 0.93 0.00 0.00 2.27
2427 2730 4.276926 GCACAATCCAGACTGTTCTTCTTT 59.723 41.667 0.93 0.00 0.00 2.52
2428 2731 3.817647 GCACAATCCAGACTGTTCTTCTT 59.182 43.478 0.93 0.00 0.00 2.52
2429 2732 3.406764 GCACAATCCAGACTGTTCTTCT 58.593 45.455 0.93 0.00 0.00 2.85
2430 2733 2.485814 GGCACAATCCAGACTGTTCTTC 59.514 50.000 0.93 0.00 0.00 2.87
2431 2734 2.107204 AGGCACAATCCAGACTGTTCTT 59.893 45.455 0.93 0.00 0.00 2.52
2432 2735 1.701847 AGGCACAATCCAGACTGTTCT 59.298 47.619 0.93 0.00 0.00 3.01
2433 2736 2.191128 AGGCACAATCCAGACTGTTC 57.809 50.000 0.93 0.00 0.00 3.18
2434 2737 3.264193 TGATAGGCACAATCCAGACTGTT 59.736 43.478 0.93 0.00 0.00 3.16
2435 2738 2.840038 TGATAGGCACAATCCAGACTGT 59.160 45.455 0.93 0.00 0.00 3.55
2436 2739 3.548745 TGATAGGCACAATCCAGACTG 57.451 47.619 0.00 0.00 0.00 3.51
2437 2740 3.264193 TGTTGATAGGCACAATCCAGACT 59.736 43.478 0.00 0.00 0.00 3.24
2438 2741 3.609853 TGTTGATAGGCACAATCCAGAC 58.390 45.455 0.00 0.00 0.00 3.51
2439 2742 3.998913 TGTTGATAGGCACAATCCAGA 57.001 42.857 0.00 0.00 0.00 3.86
2440 2743 5.587388 AATTGTTGATAGGCACAATCCAG 57.413 39.130 1.23 0.00 31.54 3.86
2441 2744 5.392919 CGAAATTGTTGATAGGCACAATCCA 60.393 40.000 1.23 0.00 31.54 3.41
2442 2745 5.036737 CGAAATTGTTGATAGGCACAATCC 58.963 41.667 1.23 0.00 31.54 3.01
2443 2746 5.739161 GTCGAAATTGTTGATAGGCACAATC 59.261 40.000 1.23 0.00 31.54 2.67
2444 2747 5.393027 GGTCGAAATTGTTGATAGGCACAAT 60.393 40.000 0.00 0.00 33.00 2.71
2445 2748 4.083003 GGTCGAAATTGTTGATAGGCACAA 60.083 41.667 0.00 0.00 0.00 3.33
2446 2749 3.438781 GGTCGAAATTGTTGATAGGCACA 59.561 43.478 0.00 0.00 0.00 4.57
2447 2750 3.689649 AGGTCGAAATTGTTGATAGGCAC 59.310 43.478 0.00 0.00 0.00 5.01
2448 2751 3.689161 CAGGTCGAAATTGTTGATAGGCA 59.311 43.478 0.00 0.00 0.00 4.75
2449 2752 3.689649 ACAGGTCGAAATTGTTGATAGGC 59.310 43.478 0.00 0.00 0.00 3.93
2450 2753 5.643777 AGAACAGGTCGAAATTGTTGATAGG 59.356 40.000 13.22 0.00 35.35 2.57
2451 2754 6.727824 AGAACAGGTCGAAATTGTTGATAG 57.272 37.500 13.22 0.00 35.35 2.08
2452 2755 7.330946 CACTAGAACAGGTCGAAATTGTTGATA 59.669 37.037 13.22 7.02 35.35 2.15
2453 2756 6.147821 CACTAGAACAGGTCGAAATTGTTGAT 59.852 38.462 13.22 6.42 35.35 2.57
2454 2757 5.465390 CACTAGAACAGGTCGAAATTGTTGA 59.535 40.000 13.22 3.39 35.35 3.18
2455 2758 5.465390 TCACTAGAACAGGTCGAAATTGTTG 59.535 40.000 13.22 4.51 35.35 3.33
2456 2759 5.607477 TCACTAGAACAGGTCGAAATTGTT 58.393 37.500 9.41 9.41 37.72 2.83
2457 2760 5.209818 TCACTAGAACAGGTCGAAATTGT 57.790 39.130 0.00 0.00 0.00 2.71
2458 2761 6.539649 TTTCACTAGAACAGGTCGAAATTG 57.460 37.500 0.00 0.00 32.39 2.32
2459 2762 8.095169 AGTATTTCACTAGAACAGGTCGAAATT 58.905 33.333 0.00 0.00 34.98 1.82
2460 2763 7.612677 AGTATTTCACTAGAACAGGTCGAAAT 58.387 34.615 0.00 0.00 34.98 2.17
2461 2764 6.989659 AGTATTTCACTAGAACAGGTCGAAA 58.010 36.000 0.00 0.00 34.98 3.46
2462 2765 6.208007 TGAGTATTTCACTAGAACAGGTCGAA 59.792 38.462 0.00 0.00 37.72 3.71
2463 2766 5.708697 TGAGTATTTCACTAGAACAGGTCGA 59.291 40.000 0.00 0.00 37.72 4.20
2464 2767 5.950883 TGAGTATTTCACTAGAACAGGTCG 58.049 41.667 0.00 0.00 37.72 4.79
2465 2768 7.324178 ACATGAGTATTTCACTAGAACAGGTC 58.676 38.462 0.00 0.00 38.99 3.85
2466 2769 7.246171 ACATGAGTATTTCACTAGAACAGGT 57.754 36.000 0.00 0.00 38.99 4.00
2467 2770 7.413438 GCAACATGAGTATTTCACTAGAACAGG 60.413 40.741 0.00 0.00 38.99 4.00
2468 2771 7.332926 AGCAACATGAGTATTTCACTAGAACAG 59.667 37.037 0.00 0.00 38.99 3.16
2469 2772 7.161404 AGCAACATGAGTATTTCACTAGAACA 58.839 34.615 0.00 0.00 38.99 3.18
2470 2773 7.602517 AGCAACATGAGTATTTCACTAGAAC 57.397 36.000 0.00 0.00 38.99 3.01
2471 2774 8.506437 CAAAGCAACATGAGTATTTCACTAGAA 58.494 33.333 0.00 0.00 38.99 2.10
2472 2775 7.119699 CCAAAGCAACATGAGTATTTCACTAGA 59.880 37.037 0.00 0.00 38.99 2.43
2473 2776 7.246311 CCAAAGCAACATGAGTATTTCACTAG 58.754 38.462 0.00 0.00 38.99 2.57
2474 2777 6.349280 GCCAAAGCAACATGAGTATTTCACTA 60.349 38.462 0.00 0.00 37.55 2.74
2475 2778 5.565439 GCCAAAGCAACATGAGTATTTCACT 60.565 40.000 0.00 0.00 37.55 3.41
2476 2779 4.622740 GCCAAAGCAACATGAGTATTTCAC 59.377 41.667 0.00 0.00 37.55 3.18
2477 2780 4.523943 AGCCAAAGCAACATGAGTATTTCA 59.476 37.500 0.00 0.00 43.56 2.69
2478 2781 4.860907 CAGCCAAAGCAACATGAGTATTTC 59.139 41.667 0.00 0.00 43.56 2.17
2479 2782 4.322198 CCAGCCAAAGCAACATGAGTATTT 60.322 41.667 0.00 0.00 43.56 1.40
2480 2783 3.194116 CCAGCCAAAGCAACATGAGTATT 59.806 43.478 0.00 0.00 43.56 1.89
2481 2784 2.756760 CCAGCCAAAGCAACATGAGTAT 59.243 45.455 0.00 0.00 43.56 2.12
2482 2785 2.161855 CCAGCCAAAGCAACATGAGTA 58.838 47.619 0.00 0.00 43.56 2.59
2483 2786 0.963962 CCAGCCAAAGCAACATGAGT 59.036 50.000 0.00 0.00 43.56 3.41
2484 2787 3.806591 CCAGCCAAAGCAACATGAG 57.193 52.632 0.00 0.00 43.56 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.