Multiple sequence alignment - TraesCS3D01G073300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G073300 chr3D 100.000 3075 0 0 1 3075 33293918 33296992 0.000000e+00 5679.0
1 TraesCS3D01G073300 chr3D 91.770 243 12 4 152 390 485206398 485206636 6.360000e-87 331.0
2 TraesCS3D01G073300 chr3D 85.522 297 22 12 151 432 432181836 432182126 1.080000e-74 291.0
3 TraesCS3D01G073300 chr3B 96.467 651 19 1 1000 1646 56055902 56056552 0.000000e+00 1072.0
4 TraesCS3D01G073300 chr3B 88.717 452 47 4 2376 2825 56057611 56058060 1.610000e-152 549.0
5 TraesCS3D01G073300 chr3B 91.864 381 22 5 1606 1982 56056559 56056934 9.770000e-145 523.0
6 TraesCS3D01G073300 chr3B 89.607 356 33 4 1981 2334 56057258 56057611 1.680000e-122 449.0
7 TraesCS3D01G073300 chr3B 92.268 194 13 2 2875 3067 56061915 56062107 1.090000e-69 274.0
8 TraesCS3D01G073300 chr3B 94.702 151 8 0 1 151 56055215 56055365 5.130000e-58 235.0
9 TraesCS3D01G073300 chr3B 84.524 168 26 0 2842 3009 636260836 636260669 1.900000e-37 167.0
10 TraesCS3D01G073300 chr3A 93.509 647 39 3 964 1610 45776129 45776772 0.000000e+00 959.0
11 TraesCS3D01G073300 chr3A 93.455 275 15 3 432 704 172969792 172970065 3.690000e-109 405.0
12 TraesCS3D01G073300 chr3A 90.164 305 19 6 1645 1940 45776840 45777142 1.340000e-103 387.0
13 TraesCS3D01G073300 chr3A 79.939 329 28 18 2000 2296 45777156 45777478 1.120000e-49 207.0
14 TraesCS3D01G073300 chr3A 85.714 168 24 0 2842 3009 620619619 620619452 8.760000e-41 178.0
15 TraesCS3D01G073300 chr3A 92.308 104 5 1 832 932 45776028 45776131 8.890000e-31 145.0
16 TraesCS3D01G073300 chr3A 90.741 54 5 0 2982 3035 13527734 13527681 4.250000e-09 73.1
17 TraesCS3D01G073300 chr3A 92.308 52 3 1 388 438 231688393 231688444 4.250000e-09 73.1
18 TraesCS3D01G073300 chr6D 88.846 520 24 15 193 698 265216266 265215767 2.620000e-170 608.0
19 TraesCS3D01G073300 chr6D 83.212 137 20 1 1785 1921 45969983 45969850 4.160000e-24 122.0
20 TraesCS3D01G073300 chr2D 86.364 506 39 16 195 693 625389988 625389506 2.720000e-145 525.0
21 TraesCS3D01G073300 chr2D 85.855 509 34 17 193 695 625389569 625390045 9.840000e-140 507.0
22 TraesCS3D01G073300 chr2D 95.167 269 11 2 432 698 358591619 358591887 1.020000e-114 424.0
23 TraesCS3D01G073300 chr2D 94.796 269 12 2 432 698 172735272 172735540 4.740000e-113 418.0
24 TraesCS3D01G073300 chr2D 94.757 267 12 2 432 696 409529239 409529505 6.130000e-112 414.0
25 TraesCS3D01G073300 chr2D 91.667 204 11 2 193 390 170427137 170427340 8.400000e-71 278.0
26 TraesCS3D01G073300 chr2D 91.584 202 13 1 193 390 52065604 52065403 3.020000e-70 276.0
27 TraesCS3D01G073300 chr2D 90.099 202 18 2 1079 1279 52227339 52227539 8.460000e-66 261.0
28 TraesCS3D01G073300 chr2D 90.594 202 11 3 193 386 399526751 399526952 8.460000e-66 261.0
29 TraesCS3D01G073300 chr2D 90.099 202 16 1 193 390 160601470 160601269 3.040000e-65 259.0
30 TraesCS3D01G073300 chr2D 90.155 193 15 1 193 381 325894412 325894604 6.580000e-62 248.0
31 TraesCS3D01G073300 chr5D 94.776 268 12 2 432 697 315918908 315919175 1.710000e-112 416.0
32 TraesCS3D01G073300 chr5D 95.076 264 12 1 432 694 120474870 120475133 6.130000e-112 414.0
33 TraesCS3D01G073300 chr7D 94.757 267 12 2 432 696 531437310 531437576 6.130000e-112 414.0
34 TraesCS3D01G073300 chr1A 94.757 267 12 2 432 696 565329507 565329773 6.130000e-112 414.0
35 TraesCS3D01G073300 chr1D 91.438 292 21 4 432 720 301710792 301710502 6.180000e-107 398.0
36 TraesCS3D01G073300 chr1D 90.763 249 14 4 193 432 223922967 223922719 1.060000e-84 324.0
37 TraesCS3D01G073300 chr1B 90.763 249 14 4 193 432 323442235 323441987 1.060000e-84 324.0
38 TraesCS3D01G073300 chr2B 87.594 266 24 5 150 409 10193853 10193591 1.790000e-77 300.0
39 TraesCS3D01G073300 chr2B 86.219 283 28 7 150 426 60980498 60980775 2.320000e-76 296.0
40 TraesCS3D01G073300 chr2B 90.594 202 17 2 1079 1279 81755681 81755881 1.820000e-67 267.0
41 TraesCS3D01G073300 chr2A 90.594 202 17 2 1079 1279 53782749 53782949 1.820000e-67 267.0
42 TraesCS3D01G073300 chr2A 88.889 189 19 2 466 653 12585365 12585178 6.630000e-57 231.0
43 TraesCS3D01G073300 chr4D 84.559 136 16 3 1786 1921 385996349 385996479 2.490000e-26 130.0
44 TraesCS3D01G073300 chr4A 86.598 97 13 0 2935 3031 509357945 509358041 1.170000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G073300 chr3D 33293918 33296992 3074 False 5679.0 5679 100.000000 1 3075 1 chr3D.!!$F1 3074
1 TraesCS3D01G073300 chr3B 56055215 56062107 6892 False 517.0 1072 92.270833 1 3067 6 chr3B.!!$F1 3066
2 TraesCS3D01G073300 chr3A 45776028 45777478 1450 False 424.5 959 88.980000 832 2296 4 chr3A.!!$F3 1464

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
784 809 0.104855 TGTTTGTGAGCTCTGCGTCT 59.895 50.0 16.19 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2363 3039 0.888285 GCTGCTGTTGAAGGTGCTCT 60.888 55.0 0.0 0.0 0.0 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.500392 AGAGTGTCCTCTAGCGAAGT 57.500 50.000 0.00 0.00 46.39 3.01
42 43 2.423892 CCTCTAGCGAAGTGTAGCTCAA 59.576 50.000 0.00 0.00 43.44 3.02
73 74 5.783111 AGTTGCTTGTGGTGGATTTATTTC 58.217 37.500 0.00 0.00 0.00 2.17
127 128 4.632538 GCGAGGTGCCTGTAATAAATTT 57.367 40.909 0.00 0.00 37.76 1.82
137 138 7.702348 GTGCCTGTAATAAATTTGTCAATCTCC 59.298 37.037 0.00 0.00 0.00 3.71
151 152 6.289834 TGTCAATCTCCAAACTTACCGTTTA 58.710 36.000 0.00 0.00 43.75 2.01
152 153 6.425721 TGTCAATCTCCAAACTTACCGTTTAG 59.574 38.462 0.00 0.00 43.75 1.85
153 154 6.647895 GTCAATCTCCAAACTTACCGTTTAGA 59.352 38.462 0.00 0.00 43.75 2.10
154 155 6.647895 TCAATCTCCAAACTTACCGTTTAGAC 59.352 38.462 0.00 0.00 43.75 2.59
155 156 5.796424 TCTCCAAACTTACCGTTTAGACT 57.204 39.130 0.00 0.00 43.75 3.24
156 157 6.899393 TCTCCAAACTTACCGTTTAGACTA 57.101 37.500 0.00 0.00 43.75 2.59
157 158 6.917533 TCTCCAAACTTACCGTTTAGACTAG 58.082 40.000 0.00 0.00 43.75 2.57
158 159 5.473039 TCCAAACTTACCGTTTAGACTAGC 58.527 41.667 0.00 0.00 43.75 3.42
159 160 4.628766 CCAAACTTACCGTTTAGACTAGCC 59.371 45.833 0.00 0.00 43.75 3.93
160 161 5.232463 CAAACTTACCGTTTAGACTAGCCA 58.768 41.667 0.00 0.00 43.75 4.75
161 162 4.446994 ACTTACCGTTTAGACTAGCCAC 57.553 45.455 0.00 0.00 0.00 5.01
162 163 3.828451 ACTTACCGTTTAGACTAGCCACA 59.172 43.478 0.00 0.00 0.00 4.17
163 164 4.281688 ACTTACCGTTTAGACTAGCCACAA 59.718 41.667 0.00 0.00 0.00 3.33
164 165 3.975168 ACCGTTTAGACTAGCCACAAT 57.025 42.857 0.00 0.00 0.00 2.71
165 166 3.596214 ACCGTTTAGACTAGCCACAATG 58.404 45.455 0.00 0.00 0.00 2.82
166 167 2.936498 CCGTTTAGACTAGCCACAATGG 59.064 50.000 0.00 0.00 41.55 3.16
167 168 2.936498 CGTTTAGACTAGCCACAATGGG 59.064 50.000 0.00 0.00 38.19 4.00
179 180 5.031066 GCCACAATGGGTAGTAACATAGA 57.969 43.478 0.00 0.00 38.19 1.98
180 181 4.814771 GCCACAATGGGTAGTAACATAGAC 59.185 45.833 0.00 0.00 38.19 2.59
181 182 5.396436 GCCACAATGGGTAGTAACATAGACT 60.396 44.000 0.00 0.00 38.19 3.24
182 183 6.183360 GCCACAATGGGTAGTAACATAGACTA 60.183 42.308 0.00 0.00 38.19 2.59
183 184 7.434492 CCACAATGGGTAGTAACATAGACTAG 58.566 42.308 0.00 0.00 32.67 2.57
184 185 7.069578 CCACAATGGGTAGTAACATAGACTAGT 59.930 40.741 0.00 0.00 32.67 2.57
185 186 9.128404 CACAATGGGTAGTAACATAGACTAGTA 57.872 37.037 0.00 0.00 30.08 1.82
186 187 9.705103 ACAATGGGTAGTAACATAGACTAGTAA 57.295 33.333 0.00 0.00 30.08 2.24
187 188 9.962783 CAATGGGTAGTAACATAGACTAGTAAC 57.037 37.037 0.00 0.00 30.08 2.50
188 189 9.705103 AATGGGTAGTAACATAGACTAGTAACA 57.295 33.333 0.00 0.00 30.08 2.41
189 190 9.878737 ATGGGTAGTAACATAGACTAGTAACAT 57.121 33.333 0.00 0.00 30.08 2.71
190 191 9.128404 TGGGTAGTAACATAGACTAGTAACATG 57.872 37.037 0.00 2.36 30.08 3.21
191 192 8.081025 GGGTAGTAACATAGACTAGTAACATGC 58.919 40.741 0.00 0.00 30.08 4.06
192 193 8.627403 GGTAGTAACATAGACTAGTAACATGCA 58.373 37.037 0.00 0.00 30.08 3.96
193 194 9.448294 GTAGTAACATAGACTAGTAACATGCAC 57.552 37.037 0.00 2.46 30.08 4.57
194 195 7.490000 AGTAACATAGACTAGTAACATGCACC 58.510 38.462 0.00 0.00 0.00 5.01
195 196 6.546428 AACATAGACTAGTAACATGCACCT 57.454 37.500 0.00 0.00 0.00 4.00
196 197 6.150396 ACATAGACTAGTAACATGCACCTC 57.850 41.667 0.00 0.00 0.00 3.85
197 198 5.894393 ACATAGACTAGTAACATGCACCTCT 59.106 40.000 0.00 0.00 0.00 3.69
198 199 7.061054 ACATAGACTAGTAACATGCACCTCTA 58.939 38.462 0.00 0.00 0.00 2.43
199 200 7.726291 ACATAGACTAGTAACATGCACCTCTAT 59.274 37.037 0.00 0.00 0.00 1.98
200 201 9.232473 CATAGACTAGTAACATGCACCTCTATA 57.768 37.037 0.00 0.00 0.00 1.31
201 202 7.753309 AGACTAGTAACATGCACCTCTATAG 57.247 40.000 0.00 0.00 0.00 1.31
202 203 7.291566 AGACTAGTAACATGCACCTCTATAGT 58.708 38.462 0.00 0.00 0.00 2.12
203 204 7.229707 AGACTAGTAACATGCACCTCTATAGTG 59.770 40.741 0.00 0.00 38.30 2.74
204 205 5.537300 AGTAACATGCACCTCTATAGTGG 57.463 43.478 17.49 17.49 35.71 4.00
205 206 3.845781 AACATGCACCTCTATAGTGGG 57.154 47.619 21.82 16.23 35.71 4.61
206 207 2.050144 ACATGCACCTCTATAGTGGGG 58.950 52.381 21.82 19.66 35.71 4.96
207 208 2.329267 CATGCACCTCTATAGTGGGGA 58.671 52.381 24.26 14.35 34.13 4.81
208 209 2.088104 TGCACCTCTATAGTGGGGAG 57.912 55.000 24.26 14.21 34.13 4.30
209 210 1.291033 TGCACCTCTATAGTGGGGAGT 59.709 52.381 24.26 1.96 34.13 3.85
210 211 2.516702 TGCACCTCTATAGTGGGGAGTA 59.483 50.000 24.26 10.88 34.13 2.59
211 212 3.052414 TGCACCTCTATAGTGGGGAGTAA 60.052 47.826 24.26 5.85 34.13 2.24
212 213 3.321396 GCACCTCTATAGTGGGGAGTAAC 59.679 52.174 24.26 4.84 34.13 2.50
213 214 4.543689 CACCTCTATAGTGGGGAGTAACA 58.456 47.826 21.82 0.00 34.13 2.41
214 215 5.148502 CACCTCTATAGTGGGGAGTAACAT 58.851 45.833 21.82 0.00 34.13 2.71
215 216 6.312529 CACCTCTATAGTGGGGAGTAACATA 58.687 44.000 21.82 0.00 34.13 2.29
216 217 6.954684 CACCTCTATAGTGGGGAGTAACATAT 59.045 42.308 21.82 0.00 34.13 1.78
217 218 6.954684 ACCTCTATAGTGGGGAGTAACATATG 59.045 42.308 21.82 0.00 33.22 1.78
218 219 6.954684 CCTCTATAGTGGGGAGTAACATATGT 59.045 42.308 12.29 1.41 0.00 2.29
219 220 7.093727 CCTCTATAGTGGGGAGTAACATATGTG 60.094 44.444 9.63 0.00 0.00 3.21
220 221 7.302948 TCTATAGTGGGGAGTAACATATGTGT 58.697 38.462 9.63 2.63 41.28 3.72
221 222 4.487714 AGTGGGGAGTAACATATGTGTG 57.512 45.455 9.63 0.00 38.92 3.82
222 223 3.844211 AGTGGGGAGTAACATATGTGTGT 59.156 43.478 9.63 0.00 38.92 3.72
223 224 4.288626 AGTGGGGAGTAACATATGTGTGTT 59.711 41.667 9.63 0.00 44.09 3.32
224 225 5.486063 AGTGGGGAGTAACATATGTGTGTTA 59.514 40.000 9.63 0.00 42.08 2.41
225 226 6.013206 AGTGGGGAGTAACATATGTGTGTTAA 60.013 38.462 9.63 0.00 43.82 2.01
226 227 6.093082 GTGGGGAGTAACATATGTGTGTTAAC 59.907 42.308 9.63 0.00 43.82 2.01
227 228 6.174760 GGGGAGTAACATATGTGTGTTAACA 58.825 40.000 9.63 3.59 43.82 2.41
228 229 6.826741 GGGGAGTAACATATGTGTGTTAACAT 59.173 38.462 12.26 0.00 43.82 2.71
229 230 7.201696 GGGGAGTAACATATGTGTGTTAACATG 60.202 40.741 12.26 7.30 43.82 3.21
230 231 7.186804 GGAGTAACATATGTGTGTTAACATGC 58.813 38.462 12.26 8.35 43.82 4.06
231 232 7.148323 GGAGTAACATATGTGTGTTAACATGCA 60.148 37.037 12.26 13.63 43.82 3.96
232 233 8.105097 AGTAACATATGTGTGTTAACATGCAA 57.895 30.769 12.26 5.85 43.82 4.08
233 234 8.020819 AGTAACATATGTGTGTTAACATGCAAC 58.979 33.333 12.26 8.81 43.82 4.17
234 235 6.324561 ACATATGTGTGTTAACATGCAACA 57.675 33.333 12.26 13.76 40.93 3.33
244 245 6.676950 TGTTAACATGCAACACTTCATTAGG 58.323 36.000 3.59 0.00 31.11 2.69
245 246 3.855689 ACATGCAACACTTCATTAGGC 57.144 42.857 0.00 0.00 0.00 3.93
246 247 3.424703 ACATGCAACACTTCATTAGGCT 58.575 40.909 0.00 0.00 0.00 4.58
247 248 4.588899 ACATGCAACACTTCATTAGGCTA 58.411 39.130 0.00 0.00 0.00 3.93
248 249 5.195940 ACATGCAACACTTCATTAGGCTAT 58.804 37.500 0.00 0.00 0.00 2.97
249 250 6.356556 ACATGCAACACTTCATTAGGCTATA 58.643 36.000 0.00 0.00 0.00 1.31
250 251 6.484643 ACATGCAACACTTCATTAGGCTATAG 59.515 38.462 0.00 0.00 0.00 1.31
251 252 6.233905 TGCAACACTTCATTAGGCTATAGA 57.766 37.500 3.21 0.00 0.00 1.98
252 253 6.049149 TGCAACACTTCATTAGGCTATAGAC 58.951 40.000 3.21 0.00 0.00 2.59
253 254 6.127054 TGCAACACTTCATTAGGCTATAGACT 60.127 38.462 13.94 13.94 37.13 3.24
254 255 6.422400 GCAACACTTCATTAGGCTATAGACTC 59.578 42.308 12.64 0.00 33.72 3.36
255 256 7.492524 CAACACTTCATTAGGCTATAGACTCA 58.507 38.462 12.64 0.42 33.72 3.41
256 257 7.847711 ACACTTCATTAGGCTATAGACTCAT 57.152 36.000 12.64 3.47 33.72 2.90
257 258 8.256356 ACACTTCATTAGGCTATAGACTCATT 57.744 34.615 12.64 0.00 33.72 2.57
258 259 8.709308 ACACTTCATTAGGCTATAGACTCATTT 58.291 33.333 12.64 0.00 33.72 2.32
259 260 9.553064 CACTTCATTAGGCTATAGACTCATTTT 57.447 33.333 12.64 0.00 33.72 1.82
262 263 9.998106 TTCATTAGGCTATAGACTCATTTTACC 57.002 33.333 12.64 0.00 33.72 2.85
263 264 9.381038 TCATTAGGCTATAGACTCATTTTACCT 57.619 33.333 12.64 2.46 33.72 3.08
294 295 8.803397 TGTGTGATGTTACTCATACTACTAGT 57.197 34.615 0.00 0.00 37.92 2.57
295 296 9.895138 TGTGTGATGTTACTCATACTACTAGTA 57.105 33.333 1.89 1.89 37.92 1.82
320 321 8.910351 AACTAGCTATGTTATCATTTTCCTCC 57.090 34.615 0.00 0.00 35.70 4.30
321 322 8.034313 ACTAGCTATGTTATCATTTTCCTCCA 57.966 34.615 0.00 0.00 35.70 3.86
322 323 8.664079 ACTAGCTATGTTATCATTTTCCTCCAT 58.336 33.333 0.00 0.00 35.70 3.41
323 324 9.512588 CTAGCTATGTTATCATTTTCCTCCATT 57.487 33.333 0.00 0.00 35.70 3.16
324 325 8.773033 AGCTATGTTATCATTTTCCTCCATTT 57.227 30.769 0.00 0.00 35.70 2.32
325 326 8.854117 AGCTATGTTATCATTTTCCTCCATTTC 58.146 33.333 0.00 0.00 35.70 2.17
326 327 8.854117 GCTATGTTATCATTTTCCTCCATTTCT 58.146 33.333 0.00 0.00 35.70 2.52
329 330 8.648698 TGTTATCATTTTCCTCCATTTCTTCA 57.351 30.769 0.00 0.00 0.00 3.02
330 331 9.258629 TGTTATCATTTTCCTCCATTTCTTCAT 57.741 29.630 0.00 0.00 0.00 2.57
337 338 8.776376 TTTTCCTCCATTTCTTCATTTATTGC 57.224 30.769 0.00 0.00 0.00 3.56
338 339 7.722949 TTCCTCCATTTCTTCATTTATTGCT 57.277 32.000 0.00 0.00 0.00 3.91
339 340 7.722949 TCCTCCATTTCTTCATTTATTGCTT 57.277 32.000 0.00 0.00 0.00 3.91
340 341 7.549839 TCCTCCATTTCTTCATTTATTGCTTG 58.450 34.615 0.00 0.00 0.00 4.01
341 342 6.257193 CCTCCATTTCTTCATTTATTGCTTGC 59.743 38.462 0.00 0.00 0.00 4.01
342 343 6.108015 TCCATTTCTTCATTTATTGCTTGCC 58.892 36.000 0.00 0.00 0.00 4.52
343 344 5.875910 CCATTTCTTCATTTATTGCTTGCCA 59.124 36.000 0.00 0.00 0.00 4.92
344 345 6.183360 CCATTTCTTCATTTATTGCTTGCCAC 60.183 38.462 0.00 0.00 0.00 5.01
345 346 5.465532 TTCTTCATTTATTGCTTGCCACA 57.534 34.783 0.00 0.00 0.00 4.17
346 347 5.664294 TCTTCATTTATTGCTTGCCACAT 57.336 34.783 0.00 0.00 0.00 3.21
347 348 5.653507 TCTTCATTTATTGCTTGCCACATC 58.346 37.500 0.00 0.00 0.00 3.06
348 349 5.185442 TCTTCATTTATTGCTTGCCACATCA 59.815 36.000 0.00 0.00 0.00 3.07
349 350 5.601583 TCATTTATTGCTTGCCACATCAT 57.398 34.783 0.00 0.00 0.00 2.45
350 351 6.712179 TCATTTATTGCTTGCCACATCATA 57.288 33.333 0.00 0.00 0.00 2.15
351 352 7.292713 TCATTTATTGCTTGCCACATCATAT 57.707 32.000 0.00 0.00 0.00 1.78
352 353 8.406730 TCATTTATTGCTTGCCACATCATATA 57.593 30.769 0.00 0.00 0.00 0.86
353 354 9.027202 TCATTTATTGCTTGCCACATCATATAT 57.973 29.630 0.00 0.00 0.00 0.86
354 355 9.647797 CATTTATTGCTTGCCACATCATATATT 57.352 29.630 0.00 0.00 0.00 1.28
356 357 9.695526 TTTATTGCTTGCCACATCATATATTTC 57.304 29.630 0.00 0.00 0.00 2.17
357 358 6.712179 TTGCTTGCCACATCATATATTTCA 57.288 33.333 0.00 0.00 0.00 2.69
358 359 6.904463 TGCTTGCCACATCATATATTTCAT 57.096 33.333 0.00 0.00 0.00 2.57
359 360 6.916440 TGCTTGCCACATCATATATTTCATC 58.084 36.000 0.00 0.00 0.00 2.92
360 361 6.717997 TGCTTGCCACATCATATATTTCATCT 59.282 34.615 0.00 0.00 0.00 2.90
361 362 7.884354 TGCTTGCCACATCATATATTTCATCTA 59.116 33.333 0.00 0.00 0.00 1.98
362 363 8.396390 GCTTGCCACATCATATATTTCATCTAG 58.604 37.037 0.00 0.00 0.00 2.43
363 364 9.662947 CTTGCCACATCATATATTTCATCTAGA 57.337 33.333 0.00 0.00 0.00 2.43
382 383 9.847706 CATCTAGATATGTGTGATGTTACTACC 57.152 37.037 4.54 0.00 32.39 3.18
383 384 9.815306 ATCTAGATATGTGTGATGTTACTACCT 57.185 33.333 2.53 0.00 0.00 3.08
398 399 9.730705 ATGTTACTACCTATATTAGACTACGCA 57.269 33.333 0.00 0.00 0.00 5.24
399 400 8.993121 TGTTACTACCTATATTAGACTACGCAC 58.007 37.037 0.00 0.00 0.00 5.34
400 401 8.993121 GTTACTACCTATATTAGACTACGCACA 58.007 37.037 0.00 0.00 0.00 4.57
401 402 7.670009 ACTACCTATATTAGACTACGCACAG 57.330 40.000 0.00 0.00 0.00 3.66
402 403 7.222872 ACTACCTATATTAGACTACGCACAGT 58.777 38.462 0.00 0.00 0.00 3.55
403 404 6.315091 ACCTATATTAGACTACGCACAGTG 57.685 41.667 0.00 0.00 0.00 3.66
404 405 5.241064 ACCTATATTAGACTACGCACAGTGG 59.759 44.000 1.84 0.00 37.35 4.00
405 406 2.961526 ATTAGACTACGCACAGTGGG 57.038 50.000 15.85 15.85 35.43 4.61
406 407 1.913778 TTAGACTACGCACAGTGGGA 58.086 50.000 23.66 7.04 35.43 4.37
407 408 1.460504 TAGACTACGCACAGTGGGAG 58.539 55.000 23.66 17.10 35.43 4.30
408 409 0.539901 AGACTACGCACAGTGGGAGT 60.540 55.000 23.66 19.76 35.43 3.85
409 410 1.171308 GACTACGCACAGTGGGAGTA 58.829 55.000 23.66 8.77 35.43 2.59
410 411 1.542915 GACTACGCACAGTGGGAGTAA 59.457 52.381 23.66 5.74 35.43 2.24
411 412 1.271656 ACTACGCACAGTGGGAGTAAC 59.728 52.381 23.66 0.00 35.43 2.50
412 413 1.271379 CTACGCACAGTGGGAGTAACA 59.729 52.381 23.66 0.00 34.12 2.41
413 414 0.685097 ACGCACAGTGGGAGTAACAT 59.315 50.000 23.66 0.00 34.12 2.71
414 415 1.897133 ACGCACAGTGGGAGTAACATA 59.103 47.619 23.66 0.00 34.12 2.29
415 416 2.094182 ACGCACAGTGGGAGTAACATAG 60.094 50.000 23.66 0.00 34.12 2.23
416 417 2.738643 CGCACAGTGGGAGTAACATAGG 60.739 54.545 12.27 0.00 31.21 2.57
417 418 2.236395 GCACAGTGGGAGTAACATAGGT 59.764 50.000 0.00 0.00 0.00 3.08
418 419 3.449737 GCACAGTGGGAGTAACATAGGTA 59.550 47.826 0.00 0.00 0.00 3.08
419 420 4.441634 GCACAGTGGGAGTAACATAGGTAG 60.442 50.000 0.00 0.00 0.00 3.18
420 421 4.710375 CACAGTGGGAGTAACATAGGTAGT 59.290 45.833 0.00 0.00 0.00 2.73
421 422 5.889853 CACAGTGGGAGTAACATAGGTAGTA 59.110 44.000 0.00 0.00 0.00 1.82
422 423 6.379133 CACAGTGGGAGTAACATAGGTAGTAA 59.621 42.308 0.00 0.00 0.00 2.24
423 424 6.379417 ACAGTGGGAGTAACATAGGTAGTAAC 59.621 42.308 0.00 0.00 0.00 2.50
424 425 6.379133 CAGTGGGAGTAACATAGGTAGTAACA 59.621 42.308 0.00 0.00 0.00 2.41
425 426 7.069578 CAGTGGGAGTAACATAGGTAGTAACAT 59.930 40.741 0.00 0.00 0.00 2.71
426 427 7.287235 AGTGGGAGTAACATAGGTAGTAACATC 59.713 40.741 0.00 0.00 0.00 3.06
427 428 7.069085 GTGGGAGTAACATAGGTAGTAACATCA 59.931 40.741 0.00 0.00 0.00 3.07
428 429 7.069085 TGGGAGTAACATAGGTAGTAACATCAC 59.931 40.741 0.00 0.00 0.00 3.06
429 430 7.069085 GGGAGTAACATAGGTAGTAACATCACA 59.931 40.741 0.00 0.00 0.00 3.58
430 431 7.919621 GGAGTAACATAGGTAGTAACATCACAC 59.080 40.741 0.00 0.00 0.00 3.82
431 432 8.357290 AGTAACATAGGTAGTAACATCACACA 57.643 34.615 0.00 0.00 0.00 3.72
432 433 8.809066 AGTAACATAGGTAGTAACATCACACAA 58.191 33.333 0.00 0.00 0.00 3.33
433 434 7.900782 AACATAGGTAGTAACATCACACAAC 57.099 36.000 0.00 0.00 0.00 3.32
434 435 6.999950 ACATAGGTAGTAACATCACACAACA 58.000 36.000 0.00 0.00 0.00 3.33
435 436 7.620880 ACATAGGTAGTAACATCACACAACAT 58.379 34.615 0.00 0.00 0.00 2.71
436 437 8.755028 ACATAGGTAGTAACATCACACAACATA 58.245 33.333 0.00 0.00 0.00 2.29
437 438 9.249457 CATAGGTAGTAACATCACACAACATAG 57.751 37.037 0.00 0.00 0.00 2.23
438 439 6.640518 AGGTAGTAACATCACACAACATAGG 58.359 40.000 0.00 0.00 0.00 2.57
439 440 6.212791 AGGTAGTAACATCACACAACATAGGT 59.787 38.462 0.00 0.00 0.00 3.08
440 441 7.398047 AGGTAGTAACATCACACAACATAGGTA 59.602 37.037 0.00 0.00 0.00 3.08
441 442 7.705325 GGTAGTAACATCACACAACATAGGTAG 59.295 40.741 0.00 0.00 0.00 3.18
442 443 7.241042 AGTAACATCACACAACATAGGTAGT 57.759 36.000 0.00 0.00 0.00 2.73
443 444 8.357290 AGTAACATCACACAACATAGGTAGTA 57.643 34.615 0.00 0.00 0.00 1.82
444 445 8.809066 AGTAACATCACACAACATAGGTAGTAA 58.191 33.333 0.00 0.00 0.00 2.24
445 446 7.900782 AACATCACACAACATAGGTAGTAAC 57.099 36.000 0.00 0.00 0.00 2.50
446 447 6.999950 ACATCACACAACATAGGTAGTAACA 58.000 36.000 0.00 0.00 0.00 2.41
447 448 7.620880 ACATCACACAACATAGGTAGTAACAT 58.379 34.615 0.00 0.00 0.00 2.71
448 449 7.764443 ACATCACACAACATAGGTAGTAACATC 59.236 37.037 0.00 0.00 0.00 3.06
449 450 7.234661 TCACACAACATAGGTAGTAACATCA 57.765 36.000 0.00 0.00 0.00 3.07
450 451 7.094631 TCACACAACATAGGTAGTAACATCAC 58.905 38.462 0.00 0.00 0.00 3.06
451 452 6.871492 CACACAACATAGGTAGTAACATCACA 59.129 38.462 0.00 0.00 0.00 3.58
452 453 6.872020 ACACAACATAGGTAGTAACATCACAC 59.128 38.462 0.00 0.00 0.00 3.82
453 454 6.871492 CACAACATAGGTAGTAACATCACACA 59.129 38.462 0.00 0.00 0.00 3.72
454 455 7.549134 CACAACATAGGTAGTAACATCACACAT 59.451 37.037 0.00 0.00 0.00 3.21
455 456 8.755028 ACAACATAGGTAGTAACATCACACATA 58.245 33.333 0.00 0.00 0.00 2.29
456 457 9.764363 CAACATAGGTAGTAACATCACACATAT 57.236 33.333 0.00 0.00 0.00 1.78
457 458 9.982651 AACATAGGTAGTAACATCACACATATC 57.017 33.333 0.00 0.00 0.00 1.63
458 459 9.368416 ACATAGGTAGTAACATCACACATATCT 57.632 33.333 0.00 0.00 0.00 1.98
461 462 8.410673 AGGTAGTAACATCACACATATCTAGG 57.589 38.462 0.00 0.00 0.00 3.02
462 463 8.005388 AGGTAGTAACATCACACATATCTAGGT 58.995 37.037 0.00 0.00 0.00 3.08
463 464 8.639761 GGTAGTAACATCACACATATCTAGGTT 58.360 37.037 0.00 0.00 0.00 3.50
480 481 7.373617 TCTAGGTTAAATAGATGATGTGGCA 57.626 36.000 0.00 0.00 0.00 4.92
481 482 7.977818 TCTAGGTTAAATAGATGATGTGGCAT 58.022 34.615 0.00 0.00 0.00 4.40
482 483 6.889301 AGGTTAAATAGATGATGTGGCATG 57.111 37.500 0.00 0.00 0.00 4.06
483 484 5.242393 AGGTTAAATAGATGATGTGGCATGC 59.758 40.000 9.90 9.90 0.00 4.06
484 485 5.009911 GGTTAAATAGATGATGTGGCATGCA 59.990 40.000 21.36 2.54 0.00 3.96
485 486 6.461370 GGTTAAATAGATGATGTGGCATGCAA 60.461 38.462 21.36 4.92 0.00 4.08
486 487 5.801531 AAATAGATGATGTGGCATGCAAT 57.198 34.783 21.36 9.79 0.00 3.56
487 488 6.904463 AAATAGATGATGTGGCATGCAATA 57.096 33.333 21.36 7.09 0.00 1.90
488 489 6.904463 AATAGATGATGTGGCATGCAATAA 57.096 33.333 21.36 3.33 0.00 1.40
489 490 6.904463 ATAGATGATGTGGCATGCAATAAA 57.096 33.333 21.36 0.00 0.00 1.40
490 491 5.801531 AGATGATGTGGCATGCAATAAAT 57.198 34.783 21.36 5.04 0.00 1.40
491 492 5.538118 AGATGATGTGGCATGCAATAAATG 58.462 37.500 21.36 0.00 0.00 2.32
492 493 5.303333 AGATGATGTGGCATGCAATAAATGA 59.697 36.000 21.36 0.22 0.00 2.57
493 494 5.340439 TGATGTGGCATGCAATAAATGAA 57.660 34.783 21.36 0.00 0.00 2.57
494 495 5.353111 TGATGTGGCATGCAATAAATGAAG 58.647 37.500 21.36 0.00 0.00 3.02
495 496 5.127356 TGATGTGGCATGCAATAAATGAAGA 59.873 36.000 21.36 0.00 0.00 2.87
496 497 5.402997 TGTGGCATGCAATAAATGAAGAA 57.597 34.783 21.36 0.00 0.00 2.52
497 498 5.791666 TGTGGCATGCAATAAATGAAGAAA 58.208 33.333 21.36 0.00 0.00 2.52
498 499 6.408035 TGTGGCATGCAATAAATGAAGAAAT 58.592 32.000 21.36 0.00 0.00 2.17
499 500 7.554211 TGTGGCATGCAATAAATGAAGAAATA 58.446 30.769 21.36 0.00 0.00 1.40
500 501 7.707464 TGTGGCATGCAATAAATGAAGAAATAG 59.293 33.333 21.36 0.00 0.00 1.73
501 502 7.922278 GTGGCATGCAATAAATGAAGAAATAGA 59.078 33.333 21.36 0.00 0.00 1.98
502 503 8.644216 TGGCATGCAATAAATGAAGAAATAGAT 58.356 29.630 21.36 0.00 0.00 1.98
503 504 8.922676 GGCATGCAATAAATGAAGAAATAGATG 58.077 33.333 21.36 0.00 0.00 2.90
504 505 9.687210 GCATGCAATAAATGAAGAAATAGATGA 57.313 29.630 14.21 0.00 0.00 2.92
550 551 8.803397 ACTACTAGTATGAGTAACATCACACA 57.197 34.615 2.33 0.00 40.07 3.72
551 552 9.409918 ACTACTAGTATGAGTAACATCACACAT 57.590 33.333 2.33 0.00 40.07 3.21
557 558 9.755804 AGTATGAGTAACATCACACATATCAAG 57.244 33.333 0.00 0.00 40.07 3.02
558 559 8.982685 GTATGAGTAACATCACACATATCAAGG 58.017 37.037 0.00 0.00 40.07 3.61
559 560 5.817296 TGAGTAACATCACACATATCAAGGC 59.183 40.000 0.00 0.00 0.00 4.35
560 561 5.744171 AGTAACATCACACATATCAAGGCA 58.256 37.500 0.00 0.00 0.00 4.75
561 562 6.179756 AGTAACATCACACATATCAAGGCAA 58.820 36.000 0.00 0.00 0.00 4.52
562 563 5.571784 AACATCACACATATCAAGGCAAG 57.428 39.130 0.00 0.00 0.00 4.01
563 564 4.847198 ACATCACACATATCAAGGCAAGA 58.153 39.130 0.00 0.00 0.00 3.02
564 565 5.443283 ACATCACACATATCAAGGCAAGAT 58.557 37.500 0.00 0.00 0.00 2.40
565 566 5.298527 ACATCACACATATCAAGGCAAGATG 59.701 40.000 0.00 0.00 36.24 2.90
566 567 4.847198 TCACACATATCAAGGCAAGATGT 58.153 39.130 2.43 0.00 0.00 3.06
569 570 5.165911 CACATATCAAGGCAAGATGTGTC 57.834 43.478 15.13 0.00 43.18 3.67
571 572 6.051074 CACATATCAAGGCAAGATGTGTCTA 58.949 40.000 15.13 0.00 43.11 2.59
572 573 6.709397 CACATATCAAGGCAAGATGTGTCTAT 59.291 38.462 15.13 0.00 43.11 1.98
573 574 7.874528 CACATATCAAGGCAAGATGTGTCTATA 59.125 37.037 15.13 0.00 43.11 1.31
574 575 8.093307 ACATATCAAGGCAAGATGTGTCTATAG 58.907 37.037 13.16 0.00 43.11 1.31
575 576 4.697514 TCAAGGCAAGATGTGTCTATAGC 58.302 43.478 0.00 0.00 43.11 2.97
576 577 3.760580 AGGCAAGATGTGTCTATAGCC 57.239 47.619 0.00 0.00 41.69 3.93
577 578 3.312890 AGGCAAGATGTGTCTATAGCCT 58.687 45.455 11.05 11.05 41.69 4.58
578 579 4.483950 AGGCAAGATGTGTCTATAGCCTA 58.516 43.478 13.74 0.00 46.63 3.93
579 580 4.901849 AGGCAAGATGTGTCTATAGCCTAA 59.098 41.667 13.74 0.00 46.63 2.69
580 581 5.545723 AGGCAAGATGTGTCTATAGCCTAAT 59.454 40.000 13.74 0.00 46.63 1.73
581 582 6.726299 AGGCAAGATGTGTCTATAGCCTAATA 59.274 38.462 13.74 0.00 46.63 0.98
582 583 7.235606 AGGCAAGATGTGTCTATAGCCTAATAA 59.764 37.037 13.74 0.00 46.63 1.40
583 584 7.878127 GGCAAGATGTGTCTATAGCCTAATAAA 59.122 37.037 0.00 0.00 40.78 1.40
584 585 9.442047 GCAAGATGTGTCTATAGCCTAATAAAT 57.558 33.333 0.00 0.00 33.30 1.40
595 596 9.944376 CTATAGCCTAATAAATAAAGTGCTCCA 57.056 33.333 0.00 0.00 0.00 3.86
597 598 7.516198 AGCCTAATAAATAAAGTGCTCCATG 57.484 36.000 0.00 0.00 0.00 3.66
598 599 7.062957 AGCCTAATAAATAAAGTGCTCCATGT 58.937 34.615 0.00 0.00 0.00 3.21
599 600 7.561356 AGCCTAATAAATAAAGTGCTCCATGTT 59.439 33.333 0.00 0.00 0.00 2.71
600 601 8.846211 GCCTAATAAATAAAGTGCTCCATGTTA 58.154 33.333 0.00 0.00 0.00 2.41
605 606 7.701539 AAATAAAGTGCTCCATGTTATCACA 57.298 32.000 0.00 0.00 37.31 3.58
606 607 6.683974 ATAAAGTGCTCCATGTTATCACAC 57.316 37.500 0.00 0.00 35.03 3.82
607 608 3.701205 AGTGCTCCATGTTATCACACA 57.299 42.857 0.00 0.00 35.03 3.72
608 609 4.226427 AGTGCTCCATGTTATCACACAT 57.774 40.909 0.00 0.00 37.93 3.21
609 610 5.357742 AGTGCTCCATGTTATCACACATA 57.642 39.130 0.00 0.00 35.51 2.29
610 611 5.933617 AGTGCTCCATGTTATCACACATAT 58.066 37.500 0.00 0.00 35.51 1.78
611 612 5.761726 AGTGCTCCATGTTATCACACATATG 59.238 40.000 0.00 0.00 35.51 1.78
612 613 5.528690 GTGCTCCATGTTATCACACATATGT 59.471 40.000 1.41 1.41 40.80 2.29
613 614 6.038603 GTGCTCCATGTTATCACACATATGTT 59.961 38.462 5.37 0.00 36.72 2.71
614 615 7.226523 GTGCTCCATGTTATCACACATATGTTA 59.773 37.037 5.37 0.00 36.72 2.41
615 616 7.938490 TGCTCCATGTTATCACACATATGTTAT 59.062 33.333 5.37 3.17 36.72 1.89
616 617 8.786898 GCTCCATGTTATCACACATATGTTATT 58.213 33.333 5.37 0.00 36.72 1.40
618 619 9.625747 TCCATGTTATCACACATATGTTATTGT 57.374 29.630 5.37 0.00 36.72 2.71
619 620 9.882996 CCATGTTATCACACATATGTTATTGTC 57.117 33.333 5.37 0.00 36.72 3.18
620 621 9.882996 CATGTTATCACACATATGTTATTGTCC 57.117 33.333 5.37 0.00 36.72 4.02
621 622 9.625747 ATGTTATCACACATATGTTATTGTCCA 57.374 29.630 5.37 0.00 36.72 4.02
622 623 8.888716 TGTTATCACACATATGTTATTGTCCAC 58.111 33.333 5.37 3.74 36.72 4.02
623 624 9.109393 GTTATCACACATATGTTATTGTCCACT 57.891 33.333 5.37 0.00 36.72 4.00
627 628 9.981114 TCACACATATGTTATTGTCCACTATAG 57.019 33.333 5.37 0.00 36.72 1.31
628 629 9.981114 CACACATATGTTATTGTCCACTATAGA 57.019 33.333 5.37 0.00 36.72 1.98
630 631 9.645059 CACATATGTTATTGTCCACTATAGAGG 57.355 37.037 5.37 9.79 0.00 3.69
631 632 9.381038 ACATATGTTATTGTCCACTATAGAGGT 57.619 33.333 14.95 0.00 0.00 3.85
636 637 9.925545 TGTTATTGTCCACTATAGAGGTAGTAA 57.074 33.333 14.95 10.13 33.29 2.24
638 639 9.925545 TTATTGTCCACTATAGAGGTAGTAACA 57.074 33.333 14.95 9.26 33.29 2.41
641 642 9.570468 TTGTCCACTATAGAGGTAGTAACATAG 57.430 37.037 14.95 0.00 33.37 2.23
642 643 8.942033 TGTCCACTATAGAGGTAGTAACATAGA 58.058 37.037 14.95 0.00 33.29 1.98
643 644 9.218440 GTCCACTATAGAGGTAGTAACATAGAC 57.782 40.741 14.95 0.00 33.29 2.59
644 645 9.168553 TCCACTATAGAGGTAGTAACATAGACT 57.831 37.037 14.95 0.00 33.29 3.24
654 655 8.804204 AGGTAGTAACATAGACTATAACATGGC 58.196 37.037 0.00 0.00 32.21 4.40
655 656 8.582437 GGTAGTAACATAGACTATAACATGGCA 58.418 37.037 0.00 0.00 32.21 4.92
671 672 6.485830 ACATGGCATGTTACTAGTCTATGT 57.514 37.500 26.78 0.70 41.63 2.29
672 673 6.889198 ACATGGCATGTTACTAGTCTATGTT 58.111 36.000 26.78 0.00 41.63 2.71
673 674 8.018537 ACATGGCATGTTACTAGTCTATGTTA 57.981 34.615 26.78 0.00 41.63 2.41
674 675 7.926555 ACATGGCATGTTACTAGTCTATGTTAC 59.073 37.037 26.78 0.00 41.63 2.50
675 676 7.655521 TGGCATGTTACTAGTCTATGTTACT 57.344 36.000 0.00 0.00 0.00 2.24
676 677 8.756486 TGGCATGTTACTAGTCTATGTTACTA 57.244 34.615 0.00 0.00 0.00 1.82
677 678 8.627403 TGGCATGTTACTAGTCTATGTTACTAC 58.373 37.037 0.00 0.00 0.00 2.73
678 679 8.081025 GGCATGTTACTAGTCTATGTTACTACC 58.919 40.741 0.00 0.00 0.00 3.18
679 680 8.081025 GCATGTTACTAGTCTATGTTACTACCC 58.919 40.741 0.00 0.00 0.00 3.69
680 681 9.128404 CATGTTACTAGTCTATGTTACTACCCA 57.872 37.037 0.00 0.00 0.00 4.51
681 682 9.878737 ATGTTACTAGTCTATGTTACTACCCAT 57.121 33.333 0.00 0.00 0.00 4.00
682 683 9.705103 TGTTACTAGTCTATGTTACTACCCATT 57.295 33.333 0.00 0.00 0.00 3.16
694 695 8.834004 TGTTACTACCCATTATGACTAGTCTT 57.166 34.615 23.01 18.81 0.00 3.01
695 696 9.925545 TGTTACTACCCATTATGACTAGTCTTA 57.074 33.333 23.01 17.80 0.00 2.10
699 700 9.134055 ACTACCCATTATGACTAGTCTTACTTC 57.866 37.037 23.01 0.00 0.00 3.01
700 701 7.362802 ACCCATTATGACTAGTCTTACTTCC 57.637 40.000 23.01 0.00 0.00 3.46
701 702 6.901300 ACCCATTATGACTAGTCTTACTTCCA 59.099 38.462 23.01 6.95 0.00 3.53
702 703 7.147707 ACCCATTATGACTAGTCTTACTTCCAC 60.148 40.741 23.01 0.00 0.00 4.02
703 704 7.070074 CCCATTATGACTAGTCTTACTTCCACT 59.930 40.741 23.01 0.00 0.00 4.00
704 705 7.923344 CCATTATGACTAGTCTTACTTCCACTG 59.077 40.741 23.01 6.03 0.00 3.66
705 706 8.470805 CATTATGACTAGTCTTACTTCCACTGT 58.529 37.037 23.01 0.00 0.00 3.55
706 707 5.707242 TGACTAGTCTTACTTCCACTGTG 57.293 43.478 23.01 0.00 0.00 3.66
707 708 4.523173 TGACTAGTCTTACTTCCACTGTGG 59.477 45.833 23.01 20.86 39.43 4.17
708 709 3.833070 ACTAGTCTTACTTCCACTGTGGG 59.167 47.826 25.67 13.63 38.32 4.61
709 710 2.690840 AGTCTTACTTCCACTGTGGGT 58.309 47.619 25.67 18.45 38.32 4.51
710 711 3.853207 AGTCTTACTTCCACTGTGGGTA 58.147 45.455 25.67 17.47 38.32 3.69
711 712 3.833070 AGTCTTACTTCCACTGTGGGTAG 59.167 47.826 25.67 22.86 38.32 3.18
712 713 3.577415 GTCTTACTTCCACTGTGGGTAGT 59.423 47.826 26.90 26.90 38.32 2.73
713 714 3.830755 TCTTACTTCCACTGTGGGTAGTC 59.169 47.826 27.28 0.00 38.32 2.59
714 715 2.400467 ACTTCCACTGTGGGTAGTCT 57.600 50.000 25.67 7.00 38.32 3.24
715 716 2.690840 ACTTCCACTGTGGGTAGTCTT 58.309 47.619 25.67 6.37 38.32 3.01
716 717 3.853207 ACTTCCACTGTGGGTAGTCTTA 58.147 45.455 25.67 1.61 38.32 2.10
725 726 5.244178 ACTGTGGGTAGTCTTAAGTCTCTTG 59.756 44.000 5.47 0.00 0.00 3.02
726 727 5.391256 TGTGGGTAGTCTTAAGTCTCTTGA 58.609 41.667 5.47 0.00 0.00 3.02
730 731 5.128008 GGGTAGTCTTAAGTCTCTTGATGCT 59.872 44.000 5.47 0.00 0.00 3.79
736 737 6.035542 GTCTTAAGTCTCTTGATGCTGCTTAC 59.964 42.308 1.63 0.00 0.00 2.34
739 740 2.935201 GTCTCTTGATGCTGCTTACAGG 59.065 50.000 0.00 0.00 44.63 4.00
751 752 0.687354 CTTACAGGAGCAGGGTGTGT 59.313 55.000 0.00 0.00 0.00 3.72
761 786 3.107601 AGCAGGGTGTGTGTCTGTATAT 58.892 45.455 0.00 0.00 0.00 0.86
762 787 4.286707 AGCAGGGTGTGTGTCTGTATATA 58.713 43.478 0.00 0.00 0.00 0.86
781 806 1.202568 CGTGTTTGTGAGCTCTGCG 59.797 57.895 16.19 5.18 0.00 5.18
784 809 0.104855 TGTTTGTGAGCTCTGCGTCT 59.895 50.000 16.19 0.00 0.00 4.18
785 810 0.510359 GTTTGTGAGCTCTGCGTCTG 59.490 55.000 16.19 0.00 0.00 3.51
786 811 0.389025 TTTGTGAGCTCTGCGTCTGA 59.611 50.000 16.19 0.00 0.00 3.27
787 812 0.389025 TTGTGAGCTCTGCGTCTGAA 59.611 50.000 16.19 0.00 0.00 3.02
831 856 4.594675 AGAGTAGCCTCTCTAACTTCCA 57.405 45.455 6.49 0.00 45.08 3.53
832 857 4.936802 AGAGTAGCCTCTCTAACTTCCAA 58.063 43.478 6.49 0.00 45.08 3.53
833 858 5.334421 AGAGTAGCCTCTCTAACTTCCAAA 58.666 41.667 6.49 0.00 45.08 3.28
834 859 5.780793 AGAGTAGCCTCTCTAACTTCCAAAA 59.219 40.000 6.49 0.00 45.08 2.44
835 860 6.270231 AGAGTAGCCTCTCTAACTTCCAAAAA 59.730 38.462 6.49 0.00 45.08 1.94
907 932 1.699257 CCCCCTTAGCTTCCCTACCAT 60.699 57.143 0.00 0.00 0.00 3.55
920 945 3.134081 TCCCTACCATCAATCCTCGTTTC 59.866 47.826 0.00 0.00 0.00 2.78
922 947 4.372656 CCTACCATCAATCCTCGTTTCTC 58.627 47.826 0.00 0.00 0.00 2.87
923 948 3.268023 ACCATCAATCCTCGTTTCTCC 57.732 47.619 0.00 0.00 0.00 3.71
925 950 3.264450 ACCATCAATCCTCGTTTCTCCTT 59.736 43.478 0.00 0.00 0.00 3.36
926 951 4.263506 ACCATCAATCCTCGTTTCTCCTTT 60.264 41.667 0.00 0.00 0.00 3.11
927 952 4.333926 CCATCAATCCTCGTTTCTCCTTTC 59.666 45.833 0.00 0.00 0.00 2.62
928 953 4.617253 TCAATCCTCGTTTCTCCTTTCA 57.383 40.909 0.00 0.00 0.00 2.69
929 954 4.968259 TCAATCCTCGTTTCTCCTTTCAA 58.032 39.130 0.00 0.00 0.00 2.69
930 955 4.997395 TCAATCCTCGTTTCTCCTTTCAAG 59.003 41.667 0.00 0.00 0.00 3.02
932 957 4.682778 TCCTCGTTTCTCCTTTCAAGAA 57.317 40.909 0.00 0.00 0.00 2.52
933 958 5.031066 TCCTCGTTTCTCCTTTCAAGAAA 57.969 39.130 0.00 0.00 39.72 2.52
934 959 5.433526 TCCTCGTTTCTCCTTTCAAGAAAA 58.566 37.500 0.24 0.00 42.63 2.29
935 960 5.296035 TCCTCGTTTCTCCTTTCAAGAAAAC 59.704 40.000 0.24 0.00 42.63 2.43
936 961 5.297029 CCTCGTTTCTCCTTTCAAGAAAACT 59.703 40.000 0.24 0.00 42.63 2.66
937 962 6.359480 TCGTTTCTCCTTTCAAGAAAACTC 57.641 37.500 0.24 0.00 42.63 3.01
938 963 6.113411 TCGTTTCTCCTTTCAAGAAAACTCT 58.887 36.000 0.24 0.00 42.63 3.24
939 964 6.258068 TCGTTTCTCCTTTCAAGAAAACTCTC 59.742 38.462 0.24 0.00 42.63 3.20
940 965 6.511929 CGTTTCTCCTTTCAAGAAAACTCTCC 60.512 42.308 0.24 0.00 42.63 3.71
941 966 4.974399 TCTCCTTTCAAGAAAACTCTCCC 58.026 43.478 0.00 0.00 0.00 4.30
942 967 4.660771 TCTCCTTTCAAGAAAACTCTCCCT 59.339 41.667 0.00 0.00 0.00 4.20
943 968 4.718961 TCCTTTCAAGAAAACTCTCCCTG 58.281 43.478 0.00 0.00 0.00 4.45
944 969 3.823304 CCTTTCAAGAAAACTCTCCCTGG 59.177 47.826 0.00 0.00 0.00 4.45
945 970 4.464947 CTTTCAAGAAAACTCTCCCTGGT 58.535 43.478 0.00 0.00 0.00 4.00
946 971 3.771577 TCAAGAAAACTCTCCCTGGTC 57.228 47.619 0.00 0.00 0.00 4.02
947 972 3.045634 TCAAGAAAACTCTCCCTGGTCA 58.954 45.455 0.00 0.00 0.00 4.02
948 973 3.458118 TCAAGAAAACTCTCCCTGGTCAA 59.542 43.478 0.00 0.00 0.00 3.18
949 974 4.104738 TCAAGAAAACTCTCCCTGGTCAAT 59.895 41.667 0.00 0.00 0.00 2.57
950 975 4.731313 AGAAAACTCTCCCTGGTCAATT 57.269 40.909 0.00 0.00 0.00 2.32
951 976 5.843019 AGAAAACTCTCCCTGGTCAATTA 57.157 39.130 0.00 0.00 0.00 1.40
952 977 6.394345 AGAAAACTCTCCCTGGTCAATTAT 57.606 37.500 0.00 0.00 0.00 1.28
953 978 6.418946 AGAAAACTCTCCCTGGTCAATTATC 58.581 40.000 0.00 0.00 0.00 1.75
954 979 5.779241 AAACTCTCCCTGGTCAATTATCA 57.221 39.130 0.00 0.00 0.00 2.15
955 980 5.983333 AACTCTCCCTGGTCAATTATCAT 57.017 39.130 0.00 0.00 0.00 2.45
956 981 7.451731 AAACTCTCCCTGGTCAATTATCATA 57.548 36.000 0.00 0.00 0.00 2.15
957 982 6.678568 ACTCTCCCTGGTCAATTATCATAG 57.321 41.667 0.00 0.00 0.00 2.23
958 983 5.012561 ACTCTCCCTGGTCAATTATCATAGC 59.987 44.000 0.00 0.00 0.00 2.97
959 984 5.158141 TCTCCCTGGTCAATTATCATAGCT 58.842 41.667 0.00 0.00 0.00 3.32
960 985 5.608437 TCTCCCTGGTCAATTATCATAGCTT 59.392 40.000 0.00 0.00 0.00 3.74
961 986 6.101734 TCTCCCTGGTCAATTATCATAGCTTT 59.898 38.462 0.00 0.00 0.00 3.51
962 987 6.064060 TCCCTGGTCAATTATCATAGCTTTG 58.936 40.000 0.00 0.00 0.00 2.77
982 1007 1.370810 GAGCATCTCCCAGCTAGCC 59.629 63.158 12.13 0.00 42.04 3.93
998 1023 2.481289 AGCCAACAAGCTAGGTTCTC 57.519 50.000 3.68 0.00 42.70 2.87
1641 1903 6.525578 CTAGTATAGCCCGTATCCATCAAA 57.474 41.667 0.00 0.00 0.00 2.69
1687 1999 7.140705 TCATATGTGTGCTAAATTGCTTATGC 58.859 34.615 1.90 0.00 40.20 3.14
1702 2014 3.450578 CTTATGCAAATGATGTGTGGGC 58.549 45.455 0.00 0.00 0.00 5.36
1838 2154 3.082579 GCACTCCTCCGGCGAGATT 62.083 63.158 21.23 1.45 38.52 2.40
1909 2225 8.005976 GGGGGAATGTTATTACCTGGTAATTAA 58.994 37.037 30.95 20.76 39.18 1.40
1953 2270 9.457436 AAGGTTAATTGGTAATCTTGTATTCGT 57.543 29.630 0.00 0.00 40.89 3.85
1954 2271 9.457436 AGGTTAATTGGTAATCTTGTATTCGTT 57.543 29.630 0.00 0.00 27.79 3.85
1974 2291 4.617645 CGTTCTCTCCAAGTCTCTAAAACG 59.382 45.833 0.00 0.00 0.00 3.60
1975 2292 4.175787 TCTCTCCAAGTCTCTAAAACGC 57.824 45.455 0.00 0.00 0.00 4.84
1976 2293 3.827302 TCTCTCCAAGTCTCTAAAACGCT 59.173 43.478 0.00 0.00 0.00 5.07
2012 2654 9.197306 TGTAGAGAGGCAGTATTTCATTAAGTA 57.803 33.333 0.00 0.00 0.00 2.24
2017 2659 9.046296 AGAGGCAGTATTTCATTAAGTAAATCG 57.954 33.333 2.08 0.00 0.00 3.34
2042 2694 6.797454 ACATGACTATTTACTCTCGTTCCTC 58.203 40.000 0.00 0.00 0.00 3.71
2045 2697 6.796426 TGACTATTTACTCTCGTTCCTCATG 58.204 40.000 0.00 0.00 0.00 3.07
2065 2717 5.937540 TCATGTGTGTTTGTAGGTATTCAGG 59.062 40.000 0.00 0.00 0.00 3.86
2095 2752 7.167924 CTGATTAATCAGCTCCTATCTAGCA 57.832 40.000 27.87 0.00 46.63 3.49
2127 2784 5.185249 AGAATCAAGGTCGCGGTATATGTAT 59.815 40.000 6.13 0.00 0.00 2.29
2142 2812 7.331026 GGTATATGTATGCAAGGAAGATGCTA 58.669 38.462 0.00 0.00 44.14 3.49
2194 2864 3.513912 TGTCAAGATCGTATCAGGGTGTT 59.486 43.478 0.00 0.00 0.00 3.32
2220 2890 7.928307 ACTAATGTTGTTCTTGCATATCAGT 57.072 32.000 0.00 0.00 0.00 3.41
2303 2979 6.901887 CGATGTTGTAGCAGCTTAAATTACTG 59.098 38.462 0.00 0.00 34.48 2.74
2305 2981 6.234920 TGTTGTAGCAGCTTAAATTACTGGA 58.765 36.000 0.00 0.00 31.94 3.86
2306 2982 6.712998 TGTTGTAGCAGCTTAAATTACTGGAA 59.287 34.615 0.00 0.00 31.94 3.53
2334 3010 7.772332 ATAAGTTACCAAATAGTTCTGCGAG 57.228 36.000 0.00 0.00 0.00 5.03
2336 3012 5.790593 AGTTACCAAATAGTTCTGCGAGAA 58.209 37.500 0.00 0.00 0.00 2.87
2338 3014 6.535508 AGTTACCAAATAGTTCTGCGAGAATC 59.464 38.462 0.00 0.00 36.50 2.52
2339 3015 5.091261 ACCAAATAGTTCTGCGAGAATCT 57.909 39.130 0.00 0.00 36.50 2.40
2340 3016 4.872691 ACCAAATAGTTCTGCGAGAATCTG 59.127 41.667 0.00 0.00 36.50 2.90
2341 3017 4.872691 CCAAATAGTTCTGCGAGAATCTGT 59.127 41.667 0.00 0.00 36.50 3.41
2342 3018 5.352569 CCAAATAGTTCTGCGAGAATCTGTT 59.647 40.000 0.00 4.42 36.50 3.16
2343 3019 6.128172 CCAAATAGTTCTGCGAGAATCTGTTT 60.128 38.462 0.00 8.47 36.50 2.83
2344 3020 6.414408 AATAGTTCTGCGAGAATCTGTTTG 57.586 37.500 0.00 0.00 36.50 2.93
2345 3021 3.070018 AGTTCTGCGAGAATCTGTTTGG 58.930 45.455 0.00 0.00 36.50 3.28
2346 3022 2.808543 GTTCTGCGAGAATCTGTTTGGT 59.191 45.455 0.00 0.00 36.50 3.67
2347 3023 3.126001 TCTGCGAGAATCTGTTTGGTT 57.874 42.857 0.00 0.00 0.00 3.67
2348 3024 3.067106 TCTGCGAGAATCTGTTTGGTTC 58.933 45.455 0.00 0.00 0.00 3.62
2349 3025 3.070018 CTGCGAGAATCTGTTTGGTTCT 58.930 45.455 0.00 0.00 35.06 3.01
2350 3026 4.021456 TCTGCGAGAATCTGTTTGGTTCTA 60.021 41.667 0.00 0.00 32.67 2.10
2351 3027 4.832248 TGCGAGAATCTGTTTGGTTCTAT 58.168 39.130 0.00 0.00 32.67 1.98
2352 3028 5.245531 TGCGAGAATCTGTTTGGTTCTATT 58.754 37.500 0.00 0.00 32.67 1.73
2353 3029 5.122239 TGCGAGAATCTGTTTGGTTCTATTG 59.878 40.000 0.00 0.00 32.67 1.90
2354 3030 5.563842 CGAGAATCTGTTTGGTTCTATTGC 58.436 41.667 0.00 0.00 32.67 3.56
2355 3031 5.122239 CGAGAATCTGTTTGGTTCTATTGCA 59.878 40.000 0.00 0.00 32.67 4.08
2356 3032 6.183360 CGAGAATCTGTTTGGTTCTATTGCAT 60.183 38.462 0.00 0.00 32.67 3.96
2357 3033 7.472334 AGAATCTGTTTGGTTCTATTGCATT 57.528 32.000 0.00 0.00 30.85 3.56
2358 3034 7.318141 AGAATCTGTTTGGTTCTATTGCATTG 58.682 34.615 0.00 0.00 30.85 2.82
2359 3035 4.808558 TCTGTTTGGTTCTATTGCATTGC 58.191 39.130 0.46 0.46 0.00 3.56
2360 3036 4.280425 TCTGTTTGGTTCTATTGCATTGCA 59.720 37.500 7.38 7.38 36.47 4.08
2361 3037 5.047164 TCTGTTTGGTTCTATTGCATTGCAT 60.047 36.000 12.95 5.57 38.76 3.96
2362 3038 5.549347 TGTTTGGTTCTATTGCATTGCATT 58.451 33.333 12.95 11.58 38.76 3.56
2363 3039 6.695429 TGTTTGGTTCTATTGCATTGCATTA 58.305 32.000 12.95 12.12 38.76 1.90
2364 3040 6.812656 TGTTTGGTTCTATTGCATTGCATTAG 59.187 34.615 24.65 24.65 41.18 1.73
2365 3041 6.772360 TTGGTTCTATTGCATTGCATTAGA 57.228 33.333 27.30 27.30 44.37 2.10
2366 3042 6.381481 TGGTTCTATTGCATTGCATTAGAG 57.619 37.500 28.37 16.77 45.60 2.43
2367 3043 5.218139 GGTTCTATTGCATTGCATTAGAGC 58.782 41.667 29.74 29.74 45.60 4.09
2368 3044 5.221106 GGTTCTATTGCATTGCATTAGAGCA 60.221 40.000 33.63 22.97 45.41 4.26
2369 3045 5.428496 TCTATTGCATTGCATTAGAGCAC 57.572 39.130 27.30 0.00 45.61 4.40
2370 3046 2.945447 TTGCATTGCATTAGAGCACC 57.055 45.000 12.95 0.00 45.61 5.01
2371 3047 2.133281 TGCATTGCATTAGAGCACCT 57.867 45.000 7.38 0.00 45.61 4.00
2372 3048 2.449464 TGCATTGCATTAGAGCACCTT 58.551 42.857 7.38 0.00 45.61 3.50
2373 3049 2.424601 TGCATTGCATTAGAGCACCTTC 59.575 45.455 7.38 0.00 45.61 3.46
2374 3050 2.424601 GCATTGCATTAGAGCACCTTCA 59.575 45.455 3.15 0.00 45.61 3.02
2375 3051 3.119388 GCATTGCATTAGAGCACCTTCAA 60.119 43.478 3.15 0.00 45.61 2.69
2376 3052 4.418392 CATTGCATTAGAGCACCTTCAAC 58.582 43.478 0.00 0.00 45.61 3.18
2377 3053 3.138884 TGCATTAGAGCACCTTCAACA 57.861 42.857 0.00 0.00 40.11 3.33
2378 3054 3.076621 TGCATTAGAGCACCTTCAACAG 58.923 45.455 0.00 0.00 40.11 3.16
2379 3055 2.159462 GCATTAGAGCACCTTCAACAGC 60.159 50.000 0.00 0.00 0.00 4.40
2380 3056 2.928801 TTAGAGCACCTTCAACAGCA 57.071 45.000 0.00 0.00 0.00 4.41
2381 3057 2.462456 TAGAGCACCTTCAACAGCAG 57.538 50.000 0.00 0.00 0.00 4.24
2382 3058 0.888285 AGAGCACCTTCAACAGCAGC 60.888 55.000 0.00 0.00 0.00 5.25
2383 3059 0.888285 GAGCACCTTCAACAGCAGCT 60.888 55.000 0.00 0.00 34.72 4.24
2440 3117 2.226330 GGGCATTTTGACCCAAAAACC 58.774 47.619 8.64 11.92 44.68 3.27
2446 3123 5.704978 GCATTTTGACCCAAAAACCACATAT 59.295 36.000 8.64 0.00 44.68 1.78
2456 3133 6.051717 CCAAAAACCACATATCCAACAACAA 58.948 36.000 0.00 0.00 0.00 2.83
2459 3136 3.838565 ACCACATATCCAACAACAACCA 58.161 40.909 0.00 0.00 0.00 3.67
2481 3158 9.862371 AACCATATATGTAAATTTTGTCGCAAA 57.138 25.926 11.73 1.63 0.00 3.68
2534 3211 1.942657 CGGCTGCAAATACATAGCACT 59.057 47.619 0.50 0.00 37.89 4.40
2538 3215 2.609002 CTGCAAATACATAGCACTCGCA 59.391 45.455 0.00 0.00 42.27 5.10
2546 3223 2.890847 ATAGCACTCGCACGACTGCC 62.891 60.000 17.25 4.38 40.73 4.85
2552 3229 3.777925 CGCACGACTGCCGGAAAG 61.778 66.667 5.05 3.88 43.93 2.62
2561 3238 1.243902 CTGCCGGAAAGCCAAAACTA 58.756 50.000 5.05 0.00 0.00 2.24
2566 3243 1.401018 CGGAAAGCCAAAACTAAGCCG 60.401 52.381 0.00 0.00 0.00 5.52
2569 3246 0.539669 AAGCCAAAACTAAGCCGCCT 60.540 50.000 0.00 0.00 0.00 5.52
2570 3247 1.212751 GCCAAAACTAAGCCGCCTG 59.787 57.895 0.00 0.00 0.00 4.85
2571 3248 1.212751 CCAAAACTAAGCCGCCTGC 59.787 57.895 0.00 0.00 41.71 4.85
2628 3305 4.699522 GCCACCACCTCCACCGTC 62.700 72.222 0.00 0.00 0.00 4.79
2629 3306 3.238497 CCACCACCTCCACCGTCA 61.238 66.667 0.00 0.00 0.00 4.35
2630 3307 2.030562 CACCACCTCCACCGTCAC 59.969 66.667 0.00 0.00 0.00 3.67
2647 3324 3.461773 CTGGATCTGCCGTCCCGT 61.462 66.667 0.00 0.00 40.66 5.28
2717 3395 2.035626 CCCCATTCGGCAACCACT 59.964 61.111 0.00 0.00 0.00 4.00
2718 3396 2.342650 CCCCATTCGGCAACCACTG 61.343 63.158 0.00 0.00 0.00 3.66
2742 3420 3.103911 CCGTCACGGCGACTGAAC 61.104 66.667 16.62 2.82 42.98 3.18
2744 3422 2.338984 GTCACGGCGACTGAACCT 59.661 61.111 16.62 0.00 41.81 3.50
2745 3423 2.022129 GTCACGGCGACTGAACCTG 61.022 63.158 16.62 0.00 41.81 4.00
2760 3438 2.822637 CCTGGCCACCACTGTCACT 61.823 63.158 0.00 0.00 0.00 3.41
2764 3442 2.510411 CCACCACTGTCACTGCCA 59.490 61.111 0.00 0.00 0.00 4.92
2787 3465 3.550431 CCCCATCGCCGGATCTGT 61.550 66.667 5.05 0.00 0.00 3.41
2788 3466 2.505982 CCCATCGCCGGATCTGTT 59.494 61.111 5.05 0.00 0.00 3.16
2789 3467 1.889105 CCCATCGCCGGATCTGTTG 60.889 63.158 5.05 0.00 0.00 3.33
2803 3481 1.550524 TCTGTTGTCCCTCATCTTCCG 59.449 52.381 0.00 0.00 0.00 4.30
2805 3483 0.744771 GTTGTCCCTCATCTTCCGGC 60.745 60.000 0.00 0.00 0.00 6.13
2809 3487 2.419198 CCTCATCTTCCGGCCGAG 59.581 66.667 30.73 18.09 0.00 4.63
2825 3503 1.278172 CGAGCGGCGAAGTGATATGG 61.278 60.000 12.98 0.00 44.57 2.74
2826 3504 0.249489 GAGCGGCGAAGTGATATGGT 60.249 55.000 12.98 0.00 0.00 3.55
2828 3506 1.000163 AGCGGCGAAGTGATATGGTAG 60.000 52.381 12.98 0.00 0.00 3.18
2882 7365 9.821662 CATTGCTGAAGTATATGATATTGTGTG 57.178 33.333 0.00 0.00 0.00 3.82
3067 7551 9.829507 AATTTGTTACACTCATTTCAATTCCAA 57.170 25.926 0.00 0.00 0.00 3.53
3069 7553 9.474920 TTTGTTACACTCATTTCAATTCCAATC 57.525 29.630 0.00 0.00 0.00 2.67
3070 7554 8.175925 TGTTACACTCATTTCAATTCCAATCA 57.824 30.769 0.00 0.00 0.00 2.57
3071 7555 8.637099 TGTTACACTCATTTCAATTCCAATCAA 58.363 29.630 0.00 0.00 0.00 2.57
3072 7556 9.643693 GTTACACTCATTTCAATTCCAATCAAT 57.356 29.630 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 3.253188 GCAACTTGACCAATTGAGCTACA 59.747 43.478 7.12 0.00 0.00 2.74
42 43 2.101249 CACCACAAGCAACTTGACCAAT 59.899 45.455 13.94 0.00 43.42 3.16
92 93 4.155280 GGCACCTCGCTTACAATTAAAAGA 59.845 41.667 3.71 0.00 41.91 2.52
97 98 2.027561 ACAGGCACCTCGCTTACAATTA 60.028 45.455 0.00 0.00 41.91 1.40
127 128 4.345859 ACGGTAAGTTTGGAGATTGACA 57.654 40.909 0.00 0.00 0.00 3.58
146 147 2.936498 CCCATTGTGGCTAGTCTAAACG 59.064 50.000 0.00 0.00 35.79 3.60
151 152 2.834113 ACTACCCATTGTGGCTAGTCT 58.166 47.619 0.00 0.00 35.79 3.24
152 153 4.081309 TGTTACTACCCATTGTGGCTAGTC 60.081 45.833 7.13 0.00 35.79 2.59
153 154 3.841845 TGTTACTACCCATTGTGGCTAGT 59.158 43.478 8.55 8.55 35.79 2.57
154 155 4.481368 TGTTACTACCCATTGTGGCTAG 57.519 45.455 0.00 0.00 35.79 3.42
155 156 5.900699 TCTATGTTACTACCCATTGTGGCTA 59.099 40.000 0.00 0.00 35.79 3.93
156 157 4.719773 TCTATGTTACTACCCATTGTGGCT 59.280 41.667 0.00 0.00 35.79 4.75
157 158 4.814771 GTCTATGTTACTACCCATTGTGGC 59.185 45.833 0.00 0.00 35.79 5.01
158 159 6.235231 AGTCTATGTTACTACCCATTGTGG 57.765 41.667 0.00 0.00 37.25 4.17
159 160 8.008513 ACTAGTCTATGTTACTACCCATTGTG 57.991 38.462 0.00 0.00 0.00 3.33
160 161 9.705103 TTACTAGTCTATGTTACTACCCATTGT 57.295 33.333 0.00 0.00 0.00 2.71
161 162 9.962783 GTTACTAGTCTATGTTACTACCCATTG 57.037 37.037 0.00 0.00 0.00 2.82
162 163 9.705103 TGTTACTAGTCTATGTTACTACCCATT 57.295 33.333 0.00 0.00 0.00 3.16
163 164 9.878737 ATGTTACTAGTCTATGTTACTACCCAT 57.121 33.333 0.00 0.00 0.00 4.00
164 165 9.128404 CATGTTACTAGTCTATGTTACTACCCA 57.872 37.037 0.00 0.00 0.00 4.51
165 166 8.081025 GCATGTTACTAGTCTATGTTACTACCC 58.919 40.741 0.00 0.00 0.00 3.69
166 167 8.627403 TGCATGTTACTAGTCTATGTTACTACC 58.373 37.037 0.00 0.00 0.00 3.18
167 168 9.448294 GTGCATGTTACTAGTCTATGTTACTAC 57.552 37.037 0.00 0.00 0.00 2.73
168 169 8.627403 GGTGCATGTTACTAGTCTATGTTACTA 58.373 37.037 0.00 0.00 0.00 1.82
169 170 7.342284 AGGTGCATGTTACTAGTCTATGTTACT 59.658 37.037 0.00 0.80 0.00 2.24
170 171 7.490000 AGGTGCATGTTACTAGTCTATGTTAC 58.510 38.462 0.00 6.75 0.00 2.50
171 172 7.560262 AGAGGTGCATGTTACTAGTCTATGTTA 59.440 37.037 0.00 0.00 0.00 2.41
172 173 6.381420 AGAGGTGCATGTTACTAGTCTATGTT 59.619 38.462 0.00 0.00 0.00 2.71
173 174 5.894393 AGAGGTGCATGTTACTAGTCTATGT 59.106 40.000 0.00 0.00 0.00 2.29
174 175 6.398234 AGAGGTGCATGTTACTAGTCTATG 57.602 41.667 0.00 4.16 0.00 2.23
175 176 9.456147 CTATAGAGGTGCATGTTACTAGTCTAT 57.544 37.037 0.00 16.42 0.00 1.98
176 177 8.438373 ACTATAGAGGTGCATGTTACTAGTCTA 58.562 37.037 6.78 3.99 0.00 2.59
177 178 7.229707 CACTATAGAGGTGCATGTTACTAGTCT 59.770 40.741 6.78 2.11 0.00 3.24
178 179 7.364200 CACTATAGAGGTGCATGTTACTAGTC 58.636 42.308 6.78 0.00 0.00 2.59
179 180 6.265649 CCACTATAGAGGTGCATGTTACTAGT 59.734 42.308 6.78 0.00 33.78 2.57
180 181 6.294787 CCCACTATAGAGGTGCATGTTACTAG 60.295 46.154 14.29 0.00 33.78 2.57
181 182 5.538813 CCCACTATAGAGGTGCATGTTACTA 59.461 44.000 14.29 0.00 33.78 1.82
182 183 4.345257 CCCACTATAGAGGTGCATGTTACT 59.655 45.833 14.29 0.00 33.78 2.24
183 184 4.503296 CCCCACTATAGAGGTGCATGTTAC 60.503 50.000 14.29 0.00 33.78 2.50
184 185 3.646162 CCCCACTATAGAGGTGCATGTTA 59.354 47.826 14.29 0.00 33.78 2.41
185 186 2.439507 CCCCACTATAGAGGTGCATGTT 59.560 50.000 14.29 0.00 33.78 2.71
186 187 2.050144 CCCCACTATAGAGGTGCATGT 58.950 52.381 14.29 0.00 33.78 3.21
187 188 2.301296 CTCCCCACTATAGAGGTGCATG 59.699 54.545 14.29 0.00 33.78 4.06
188 189 2.090494 ACTCCCCACTATAGAGGTGCAT 60.090 50.000 14.29 0.00 33.78 3.96
189 190 1.291033 ACTCCCCACTATAGAGGTGCA 59.709 52.381 14.29 0.00 33.78 4.57
190 191 2.089600 ACTCCCCACTATAGAGGTGC 57.910 55.000 14.29 0.00 33.78 5.01
191 192 4.543689 TGTTACTCCCCACTATAGAGGTG 58.456 47.826 14.29 4.05 31.70 4.00
192 193 4.894252 TGTTACTCCCCACTATAGAGGT 57.106 45.455 14.29 0.00 31.70 3.85
193 194 6.954684 ACATATGTTACTCCCCACTATAGAGG 59.045 42.308 6.78 8.10 31.70 3.69
194 195 7.451877 ACACATATGTTACTCCCCACTATAGAG 59.548 40.741 5.37 0.00 34.46 2.43
195 196 7.232737 CACACATATGTTACTCCCCACTATAGA 59.767 40.741 5.37 0.00 36.72 1.98
196 197 7.015292 ACACACATATGTTACTCCCCACTATAG 59.985 40.741 5.37 0.00 36.72 1.31
197 198 6.842280 ACACACATATGTTACTCCCCACTATA 59.158 38.462 5.37 0.00 36.72 1.31
198 199 5.665812 ACACACATATGTTACTCCCCACTAT 59.334 40.000 5.37 0.00 36.72 2.12
199 200 5.027460 ACACACATATGTTACTCCCCACTA 58.973 41.667 5.37 0.00 36.72 2.74
200 201 3.844211 ACACACATATGTTACTCCCCACT 59.156 43.478 5.37 0.00 36.72 4.00
201 202 4.216411 ACACACATATGTTACTCCCCAC 57.784 45.455 5.37 0.00 36.72 4.61
202 203 4.919774 AACACACATATGTTACTCCCCA 57.080 40.909 5.37 0.00 41.04 4.96
203 204 6.174760 TGTTAACACACATATGTTACTCCCC 58.825 40.000 5.37 0.00 43.14 4.81
204 205 7.678690 GCATGTTAACACACATATGTTACTCCC 60.679 40.741 11.22 0.00 43.14 4.30
205 206 7.148323 TGCATGTTAACACACATATGTTACTCC 60.148 37.037 11.22 0.00 43.14 3.85
206 207 7.747888 TGCATGTTAACACACATATGTTACTC 58.252 34.615 11.22 0.00 43.14 2.59
207 208 7.680442 TGCATGTTAACACACATATGTTACT 57.320 32.000 11.22 0.00 43.14 2.24
208 209 7.805542 TGTTGCATGTTAACACACATATGTTAC 59.194 33.333 11.22 6.70 43.14 2.50
209 210 7.875971 TGTTGCATGTTAACACACATATGTTA 58.124 30.769 11.22 0.00 42.73 2.41
210 211 6.743110 TGTTGCATGTTAACACACATATGTT 58.257 32.000 11.22 0.00 44.87 2.71
211 212 6.324561 TGTTGCATGTTAACACACATATGT 57.675 33.333 11.22 1.41 40.80 2.29
220 221 6.676950 CCTAATGAAGTGTTGCATGTTAACA 58.323 36.000 11.41 11.41 35.81 2.41
221 222 5.572896 GCCTAATGAAGTGTTGCATGTTAAC 59.427 40.000 0.00 0.00 0.00 2.01
222 223 5.476599 AGCCTAATGAAGTGTTGCATGTTAA 59.523 36.000 0.00 0.00 0.00 2.01
223 224 5.009631 AGCCTAATGAAGTGTTGCATGTTA 58.990 37.500 0.00 0.00 0.00 2.41
224 225 3.828451 AGCCTAATGAAGTGTTGCATGTT 59.172 39.130 0.00 0.00 0.00 2.71
225 226 3.424703 AGCCTAATGAAGTGTTGCATGT 58.575 40.909 0.00 0.00 0.00 3.21
226 227 5.762825 ATAGCCTAATGAAGTGTTGCATG 57.237 39.130 0.00 0.00 0.00 4.06
227 228 6.708054 GTCTATAGCCTAATGAAGTGTTGCAT 59.292 38.462 0.00 0.00 0.00 3.96
228 229 6.049149 GTCTATAGCCTAATGAAGTGTTGCA 58.951 40.000 0.00 0.00 0.00 4.08
229 230 6.284459 AGTCTATAGCCTAATGAAGTGTTGC 58.716 40.000 0.00 0.00 0.00 4.17
230 231 7.492524 TGAGTCTATAGCCTAATGAAGTGTTG 58.507 38.462 0.00 0.00 0.00 3.33
231 232 7.661536 TGAGTCTATAGCCTAATGAAGTGTT 57.338 36.000 0.00 0.00 0.00 3.32
232 233 7.847711 ATGAGTCTATAGCCTAATGAAGTGT 57.152 36.000 0.00 0.00 0.00 3.55
233 234 9.553064 AAAATGAGTCTATAGCCTAATGAAGTG 57.447 33.333 0.00 0.00 0.00 3.16
236 237 9.998106 GGTAAAATGAGTCTATAGCCTAATGAA 57.002 33.333 0.00 0.00 0.00 2.57
237 238 9.381038 AGGTAAAATGAGTCTATAGCCTAATGA 57.619 33.333 0.00 0.00 0.00 2.57
268 269 9.409918 ACTAGTAGTATGAGTAACATCACACAT 57.590 33.333 0.00 0.00 40.07 3.21
269 270 8.803397 ACTAGTAGTATGAGTAACATCACACA 57.197 34.615 0.00 0.00 40.07 3.72
294 295 9.998106 GGAGGAAAATGATAACATAGCTAGTTA 57.002 33.333 14.23 14.23 35.50 2.24
295 296 8.494433 TGGAGGAAAATGATAACATAGCTAGTT 58.506 33.333 0.00 6.69 35.50 2.24
296 297 8.034313 TGGAGGAAAATGATAACATAGCTAGT 57.966 34.615 0.00 0.00 35.50 2.57
297 298 9.512588 AATGGAGGAAAATGATAACATAGCTAG 57.487 33.333 0.00 0.00 35.50 3.42
298 299 9.866655 AAATGGAGGAAAATGATAACATAGCTA 57.133 29.630 0.00 0.00 35.50 3.32
299 300 8.773033 AAATGGAGGAAAATGATAACATAGCT 57.227 30.769 0.00 0.00 35.50 3.32
300 301 8.854117 AGAAATGGAGGAAAATGATAACATAGC 58.146 33.333 0.00 0.00 35.50 2.97
303 304 9.258629 TGAAGAAATGGAGGAAAATGATAACAT 57.741 29.630 0.00 0.00 38.50 2.71
304 305 8.648698 TGAAGAAATGGAGGAAAATGATAACA 57.351 30.769 0.00 0.00 0.00 2.41
311 312 9.387257 GCAATAAATGAAGAAATGGAGGAAAAT 57.613 29.630 0.00 0.00 0.00 1.82
312 313 8.596293 AGCAATAAATGAAGAAATGGAGGAAAA 58.404 29.630 0.00 0.00 0.00 2.29
313 314 8.137745 AGCAATAAATGAAGAAATGGAGGAAA 57.862 30.769 0.00 0.00 0.00 3.13
314 315 7.722949 AGCAATAAATGAAGAAATGGAGGAA 57.277 32.000 0.00 0.00 0.00 3.36
315 316 7.549839 CAAGCAATAAATGAAGAAATGGAGGA 58.450 34.615 0.00 0.00 0.00 3.71
316 317 6.257193 GCAAGCAATAAATGAAGAAATGGAGG 59.743 38.462 0.00 0.00 0.00 4.30
317 318 6.257193 GGCAAGCAATAAATGAAGAAATGGAG 59.743 38.462 0.00 0.00 0.00 3.86
318 319 6.108015 GGCAAGCAATAAATGAAGAAATGGA 58.892 36.000 0.00 0.00 0.00 3.41
319 320 5.875910 TGGCAAGCAATAAATGAAGAAATGG 59.124 36.000 0.00 0.00 0.00 3.16
320 321 6.369340 TGTGGCAAGCAATAAATGAAGAAATG 59.631 34.615 0.00 0.00 0.00 2.32
321 322 6.465948 TGTGGCAAGCAATAAATGAAGAAAT 58.534 32.000 0.00 0.00 0.00 2.17
322 323 5.851720 TGTGGCAAGCAATAAATGAAGAAA 58.148 33.333 0.00 0.00 0.00 2.52
323 324 5.465532 TGTGGCAAGCAATAAATGAAGAA 57.534 34.783 0.00 0.00 0.00 2.52
324 325 5.185442 TGATGTGGCAAGCAATAAATGAAGA 59.815 36.000 0.00 0.00 0.00 2.87
325 326 5.412640 TGATGTGGCAAGCAATAAATGAAG 58.587 37.500 0.00 0.00 0.00 3.02
326 327 5.402997 TGATGTGGCAAGCAATAAATGAA 57.597 34.783 0.00 0.00 0.00 2.57
327 328 5.601583 ATGATGTGGCAAGCAATAAATGA 57.398 34.783 0.00 0.00 0.00 2.57
328 329 9.647797 AATATATGATGTGGCAAGCAATAAATG 57.352 29.630 0.00 0.00 0.00 2.32
330 331 9.695526 GAAATATATGATGTGGCAAGCAATAAA 57.304 29.630 0.00 0.00 0.00 1.40
331 332 8.858094 TGAAATATATGATGTGGCAAGCAATAA 58.142 29.630 0.00 0.00 0.00 1.40
332 333 8.406730 TGAAATATATGATGTGGCAAGCAATA 57.593 30.769 0.00 0.00 0.00 1.90
333 334 7.292713 TGAAATATATGATGTGGCAAGCAAT 57.707 32.000 0.00 0.00 0.00 3.56
334 335 6.712179 TGAAATATATGATGTGGCAAGCAA 57.288 33.333 0.00 0.00 0.00 3.91
335 336 6.717997 AGATGAAATATATGATGTGGCAAGCA 59.282 34.615 0.00 0.00 0.00 3.91
336 337 7.154435 AGATGAAATATATGATGTGGCAAGC 57.846 36.000 0.00 0.00 0.00 4.01
337 338 9.662947 TCTAGATGAAATATATGATGTGGCAAG 57.337 33.333 0.00 0.00 0.00 4.01
356 357 9.847706 GGTAGTAACATCACACATATCTAGATG 57.152 37.037 15.79 3.53 41.28 2.90
357 358 9.815306 AGGTAGTAACATCACACATATCTAGAT 57.185 33.333 10.73 10.73 0.00 1.98
372 373 9.730705 TGCGTAGTCTAATATAGGTAGTAACAT 57.269 33.333 0.00 0.00 0.00 2.71
373 374 8.993121 GTGCGTAGTCTAATATAGGTAGTAACA 58.007 37.037 0.00 0.00 0.00 2.41
374 375 8.993121 TGTGCGTAGTCTAATATAGGTAGTAAC 58.007 37.037 0.00 0.00 0.00 2.50
375 376 9.212641 CTGTGCGTAGTCTAATATAGGTAGTAA 57.787 37.037 0.00 0.00 0.00 2.24
376 377 8.370940 ACTGTGCGTAGTCTAATATAGGTAGTA 58.629 37.037 0.00 0.00 0.00 1.82
377 378 7.172875 CACTGTGCGTAGTCTAATATAGGTAGT 59.827 40.741 0.00 0.00 0.00 2.73
378 379 7.361031 CCACTGTGCGTAGTCTAATATAGGTAG 60.361 44.444 1.29 0.00 0.00 3.18
379 380 6.429078 CCACTGTGCGTAGTCTAATATAGGTA 59.571 42.308 1.29 0.00 0.00 3.08
380 381 5.241064 CCACTGTGCGTAGTCTAATATAGGT 59.759 44.000 1.29 0.00 0.00 3.08
381 382 5.335740 CCCACTGTGCGTAGTCTAATATAGG 60.336 48.000 1.29 0.00 0.00 2.57
382 383 5.472478 TCCCACTGTGCGTAGTCTAATATAG 59.528 44.000 1.29 0.00 0.00 1.31
383 384 5.379187 TCCCACTGTGCGTAGTCTAATATA 58.621 41.667 1.29 0.00 0.00 0.86
384 385 4.212716 TCCCACTGTGCGTAGTCTAATAT 58.787 43.478 1.29 0.00 0.00 1.28
385 386 3.623703 TCCCACTGTGCGTAGTCTAATA 58.376 45.455 1.29 0.00 0.00 0.98
386 387 2.427453 CTCCCACTGTGCGTAGTCTAAT 59.573 50.000 1.29 0.00 0.00 1.73
387 388 1.816835 CTCCCACTGTGCGTAGTCTAA 59.183 52.381 1.29 0.00 0.00 2.10
388 389 1.271762 ACTCCCACTGTGCGTAGTCTA 60.272 52.381 1.29 0.00 0.00 2.59
389 390 0.539901 ACTCCCACTGTGCGTAGTCT 60.540 55.000 1.29 0.00 0.00 3.24
390 391 1.171308 TACTCCCACTGTGCGTAGTC 58.829 55.000 1.29 0.00 0.00 2.59
391 392 1.271656 GTTACTCCCACTGTGCGTAGT 59.728 52.381 1.29 7.58 0.00 2.73
392 393 1.271379 TGTTACTCCCACTGTGCGTAG 59.729 52.381 1.29 1.78 0.00 3.51
393 394 1.330234 TGTTACTCCCACTGTGCGTA 58.670 50.000 1.29 0.92 0.00 4.42
394 395 0.685097 ATGTTACTCCCACTGTGCGT 59.315 50.000 1.29 1.87 0.00 5.24
395 396 2.540515 CTATGTTACTCCCACTGTGCG 58.459 52.381 1.29 0.00 0.00 5.34
396 397 2.236395 ACCTATGTTACTCCCACTGTGC 59.764 50.000 1.29 0.00 0.00 4.57
397 398 4.710375 ACTACCTATGTTACTCCCACTGTG 59.290 45.833 0.00 0.00 0.00 3.66
398 399 4.944177 ACTACCTATGTTACTCCCACTGT 58.056 43.478 0.00 0.00 0.00 3.55
399 400 6.379133 TGTTACTACCTATGTTACTCCCACTG 59.621 42.308 0.00 0.00 0.00 3.66
400 401 6.496743 TGTTACTACCTATGTTACTCCCACT 58.503 40.000 0.00 0.00 0.00 4.00
401 402 6.780457 TGTTACTACCTATGTTACTCCCAC 57.220 41.667 0.00 0.00 0.00 4.61
402 403 7.069085 GTGATGTTACTACCTATGTTACTCCCA 59.931 40.741 0.00 0.00 0.00 4.37
403 404 7.069085 TGTGATGTTACTACCTATGTTACTCCC 59.931 40.741 0.00 0.00 0.00 4.30
404 405 7.919621 GTGTGATGTTACTACCTATGTTACTCC 59.080 40.741 0.00 0.00 0.00 3.85
405 406 8.464404 TGTGTGATGTTACTACCTATGTTACTC 58.536 37.037 0.00 0.00 0.00 2.59
406 407 8.357290 TGTGTGATGTTACTACCTATGTTACT 57.643 34.615 0.00 0.00 0.00 2.24
407 408 8.866956 GTTGTGTGATGTTACTACCTATGTTAC 58.133 37.037 0.00 0.00 0.00 2.50
408 409 8.586744 TGTTGTGTGATGTTACTACCTATGTTA 58.413 33.333 0.00 0.00 0.00 2.41
409 410 7.446769 TGTTGTGTGATGTTACTACCTATGTT 58.553 34.615 0.00 0.00 0.00 2.71
410 411 6.999950 TGTTGTGTGATGTTACTACCTATGT 58.000 36.000 0.00 0.00 0.00 2.29
411 412 9.249457 CTATGTTGTGTGATGTTACTACCTATG 57.751 37.037 0.00 0.00 0.00 2.23
412 413 8.421784 CCTATGTTGTGTGATGTTACTACCTAT 58.578 37.037 0.00 0.00 0.00 2.57
413 414 7.398047 ACCTATGTTGTGTGATGTTACTACCTA 59.602 37.037 0.00 0.00 0.00 3.08
414 415 6.212791 ACCTATGTTGTGTGATGTTACTACCT 59.787 38.462 0.00 0.00 0.00 3.08
415 416 6.403878 ACCTATGTTGTGTGATGTTACTACC 58.596 40.000 0.00 0.00 0.00 3.18
416 417 8.248945 ACTACCTATGTTGTGTGATGTTACTAC 58.751 37.037 0.00 0.00 0.00 2.73
417 418 8.357290 ACTACCTATGTTGTGTGATGTTACTA 57.643 34.615 0.00 0.00 0.00 1.82
418 419 7.241042 ACTACCTATGTTGTGTGATGTTACT 57.759 36.000 0.00 0.00 0.00 2.24
419 420 8.866956 GTTACTACCTATGTTGTGTGATGTTAC 58.133 37.037 0.00 0.00 32.62 2.50
420 421 8.586744 TGTTACTACCTATGTTGTGTGATGTTA 58.413 33.333 0.00 0.00 32.62 2.41
421 422 7.446769 TGTTACTACCTATGTTGTGTGATGTT 58.553 34.615 0.00 0.00 32.62 2.71
422 423 6.999950 TGTTACTACCTATGTTGTGTGATGT 58.000 36.000 0.00 0.00 32.62 3.06
423 424 7.763985 TGATGTTACTACCTATGTTGTGTGATG 59.236 37.037 0.00 0.00 32.62 3.07
424 425 7.764443 GTGATGTTACTACCTATGTTGTGTGAT 59.236 37.037 0.00 0.00 32.62 3.06
425 426 7.094631 GTGATGTTACTACCTATGTTGTGTGA 58.905 38.462 0.00 0.00 32.62 3.58
426 427 6.871492 TGTGATGTTACTACCTATGTTGTGTG 59.129 38.462 0.00 0.00 32.62 3.82
427 428 6.872020 GTGTGATGTTACTACCTATGTTGTGT 59.128 38.462 0.00 0.00 32.62 3.72
428 429 6.871492 TGTGTGATGTTACTACCTATGTTGTG 59.129 38.462 0.00 0.00 32.62 3.33
429 430 6.999950 TGTGTGATGTTACTACCTATGTTGT 58.000 36.000 0.00 0.00 34.75 3.32
430 431 9.764363 ATATGTGTGATGTTACTACCTATGTTG 57.236 33.333 0.00 0.00 0.00 3.33
431 432 9.982651 GATATGTGTGATGTTACTACCTATGTT 57.017 33.333 0.00 0.00 0.00 2.71
432 433 9.368416 AGATATGTGTGATGTTACTACCTATGT 57.632 33.333 0.00 0.00 0.00 2.29
435 436 9.516546 CCTAGATATGTGTGATGTTACTACCTA 57.483 37.037 0.00 0.00 0.00 3.08
436 437 8.005388 ACCTAGATATGTGTGATGTTACTACCT 58.995 37.037 0.00 0.00 0.00 3.08
437 438 8.179509 ACCTAGATATGTGTGATGTTACTACC 57.820 38.462 0.00 0.00 0.00 3.18
454 455 9.100197 TGCCACATCATCTATTTAACCTAGATA 57.900 33.333 6.48 0.00 34.84 1.98
455 456 7.977818 TGCCACATCATCTATTTAACCTAGAT 58.022 34.615 0.00 2.29 36.58 1.98
456 457 7.373617 TGCCACATCATCTATTTAACCTAGA 57.626 36.000 0.00 0.00 0.00 2.43
457 458 7.361542 GCATGCCACATCATCTATTTAACCTAG 60.362 40.741 6.36 0.00 0.00 3.02
458 459 6.430925 GCATGCCACATCATCTATTTAACCTA 59.569 38.462 6.36 0.00 0.00 3.08
459 460 5.242393 GCATGCCACATCATCTATTTAACCT 59.758 40.000 6.36 0.00 0.00 3.50
460 461 5.009911 TGCATGCCACATCATCTATTTAACC 59.990 40.000 16.68 0.00 0.00 2.85
461 462 6.075762 TGCATGCCACATCATCTATTTAAC 57.924 37.500 16.68 0.00 0.00 2.01
462 463 6.712179 TTGCATGCCACATCATCTATTTAA 57.288 33.333 16.68 0.00 0.00 1.52
463 464 6.904463 ATTGCATGCCACATCATCTATTTA 57.096 33.333 16.68 0.00 0.00 1.40
464 465 5.801531 ATTGCATGCCACATCATCTATTT 57.198 34.783 16.68 0.00 0.00 1.40
465 466 6.904463 TTATTGCATGCCACATCATCTATT 57.096 33.333 16.68 0.00 0.00 1.73
466 467 6.904463 TTTATTGCATGCCACATCATCTAT 57.096 33.333 16.68 0.00 0.00 1.98
467 468 6.490721 TCATTTATTGCATGCCACATCATCTA 59.509 34.615 16.68 0.00 0.00 1.98
468 469 5.303333 TCATTTATTGCATGCCACATCATCT 59.697 36.000 16.68 0.00 0.00 2.90
469 470 5.534407 TCATTTATTGCATGCCACATCATC 58.466 37.500 16.68 0.00 0.00 2.92
470 471 5.538849 TCATTTATTGCATGCCACATCAT 57.461 34.783 16.68 0.00 0.00 2.45
471 472 5.127356 TCTTCATTTATTGCATGCCACATCA 59.873 36.000 16.68 0.00 0.00 3.07
472 473 5.593968 TCTTCATTTATTGCATGCCACATC 58.406 37.500 16.68 0.00 0.00 3.06
473 474 5.601583 TCTTCATTTATTGCATGCCACAT 57.398 34.783 16.68 7.29 0.00 3.21
474 475 5.402997 TTCTTCATTTATTGCATGCCACA 57.597 34.783 16.68 0.00 0.00 4.17
475 476 6.913873 ATTTCTTCATTTATTGCATGCCAC 57.086 33.333 16.68 0.00 0.00 5.01
476 477 8.009622 TCTATTTCTTCATTTATTGCATGCCA 57.990 30.769 16.68 4.04 0.00 4.92
477 478 8.922676 CATCTATTTCTTCATTTATTGCATGCC 58.077 33.333 16.68 0.00 0.00 4.40
478 479 9.687210 TCATCTATTTCTTCATTTATTGCATGC 57.313 29.630 11.82 11.82 0.00 4.06
489 490 9.739276 TGTTACCACTTTCATCTATTTCTTCAT 57.261 29.630 0.00 0.00 0.00 2.57
490 491 9.739276 ATGTTACCACTTTCATCTATTTCTTCA 57.261 29.630 0.00 0.00 0.00 3.02
493 494 9.331282 GCTATGTTACCACTTTCATCTATTTCT 57.669 33.333 0.00 0.00 0.00 2.52
494 495 9.331282 AGCTATGTTACCACTTTCATCTATTTC 57.669 33.333 0.00 0.00 0.00 2.17
496 497 9.988815 CTAGCTATGTTACCACTTTCATCTATT 57.011 33.333 0.00 0.00 0.00 1.73
497 498 9.148879 ACTAGCTATGTTACCACTTTCATCTAT 57.851 33.333 0.00 0.00 0.00 1.98
498 499 8.534954 ACTAGCTATGTTACCACTTTCATCTA 57.465 34.615 0.00 0.00 0.00 1.98
499 500 7.425224 ACTAGCTATGTTACCACTTTCATCT 57.575 36.000 0.00 0.00 0.00 2.90
500 501 9.032420 GTAACTAGCTATGTTACCACTTTCATC 57.968 37.037 22.55 6.32 42.06 2.92
501 502 8.759782 AGTAACTAGCTATGTTACCACTTTCAT 58.240 33.333 25.92 13.30 46.31 2.57
502 503 8.130671 AGTAACTAGCTATGTTACCACTTTCA 57.869 34.615 25.92 4.92 46.31 2.69
503 504 9.513727 GTAGTAACTAGCTATGTTACCACTTTC 57.486 37.037 25.92 12.94 46.31 2.62
504 505 9.252635 AGTAGTAACTAGCTATGTTACCACTTT 57.747 33.333 24.23 16.61 44.23 2.66
505 506 8.820153 AGTAGTAACTAGCTATGTTACCACTT 57.180 34.615 24.23 16.82 44.23 3.16
506 507 9.558396 CTAGTAGTAACTAGCTATGTTACCACT 57.442 37.037 27.98 27.98 46.53 4.00
524 525 9.895138 TGTGTGATGTTACTCATACTAGTAGTA 57.105 33.333 12.38 12.38 37.92 1.82
525 526 8.803397 TGTGTGATGTTACTCATACTAGTAGT 57.197 34.615 8.85 8.14 37.92 2.73
531 532 9.755804 CTTGATATGTGTGATGTTACTCATACT 57.244 33.333 10.75 3.32 38.84 2.12
532 533 8.982685 CCTTGATATGTGTGATGTTACTCATAC 58.017 37.037 0.00 5.35 38.84 2.39
533 534 7.657354 GCCTTGATATGTGTGATGTTACTCATA 59.343 37.037 0.00 0.00 39.73 2.15
534 535 6.484643 GCCTTGATATGTGTGATGTTACTCAT 59.515 38.462 0.00 0.00 38.11 2.90
535 536 5.817296 GCCTTGATATGTGTGATGTTACTCA 59.183 40.000 0.00 0.00 0.00 3.41
536 537 5.817296 TGCCTTGATATGTGTGATGTTACTC 59.183 40.000 0.00 0.00 0.00 2.59
537 538 5.744171 TGCCTTGATATGTGTGATGTTACT 58.256 37.500 0.00 0.00 0.00 2.24
538 539 6.316140 TCTTGCCTTGATATGTGTGATGTTAC 59.684 38.462 0.00 0.00 0.00 2.50
539 540 6.413892 TCTTGCCTTGATATGTGTGATGTTA 58.586 36.000 0.00 0.00 0.00 2.41
540 541 5.255687 TCTTGCCTTGATATGTGTGATGTT 58.744 37.500 0.00 0.00 0.00 2.71
541 542 4.847198 TCTTGCCTTGATATGTGTGATGT 58.153 39.130 0.00 0.00 0.00 3.06
542 543 5.298527 ACATCTTGCCTTGATATGTGTGATG 59.701 40.000 0.00 0.00 35.23 3.07
543 544 5.298527 CACATCTTGCCTTGATATGTGTGAT 59.701 40.000 0.00 0.00 41.46 3.06
544 545 4.637091 CACATCTTGCCTTGATATGTGTGA 59.363 41.667 0.00 0.00 41.46 3.58
545 546 4.916870 CACATCTTGCCTTGATATGTGTG 58.083 43.478 0.00 0.00 41.46 3.82
548 549 5.108187 AGACACATCTTGCCTTGATATGT 57.892 39.130 0.00 0.00 34.70 2.29
549 550 7.064371 GCTATAGACACATCTTGCCTTGATATG 59.936 40.741 3.21 0.00 36.29 1.78
550 551 7.102346 GCTATAGACACATCTTGCCTTGATAT 58.898 38.462 3.21 0.00 36.29 1.63
551 552 6.459066 GCTATAGACACATCTTGCCTTGATA 58.541 40.000 3.21 0.00 36.29 2.15
552 553 5.303971 GCTATAGACACATCTTGCCTTGAT 58.696 41.667 3.21 0.00 36.29 2.57
553 554 4.443457 GGCTATAGACACATCTTGCCTTGA 60.443 45.833 3.21 0.00 39.50 3.02
554 555 3.812053 GGCTATAGACACATCTTGCCTTG 59.188 47.826 3.21 0.00 39.50 3.61
555 556 3.713764 AGGCTATAGACACATCTTGCCTT 59.286 43.478 8.68 0.00 45.01 4.35
556 557 3.312890 AGGCTATAGACACATCTTGCCT 58.687 45.455 8.68 0.00 43.78 4.75
557 558 3.760580 AGGCTATAGACACATCTTGCC 57.239 47.619 8.68 0.00 41.26 4.52
558 559 8.833231 TTTATTAGGCTATAGACACATCTTGC 57.167 34.615 8.68 0.00 36.29 4.01
569 570 9.944376 TGGAGCACTTTATTTATTAGGCTATAG 57.056 33.333 0.00 0.00 0.00 1.31
571 572 9.236006 CATGGAGCACTTTATTTATTAGGCTAT 57.764 33.333 0.00 0.00 0.00 2.97
572 573 8.217799 ACATGGAGCACTTTATTTATTAGGCTA 58.782 33.333 0.00 0.00 0.00 3.93
573 574 7.062957 ACATGGAGCACTTTATTTATTAGGCT 58.937 34.615 0.00 0.00 0.00 4.58
574 575 7.277174 ACATGGAGCACTTTATTTATTAGGC 57.723 36.000 0.00 0.00 0.00 3.93
579 580 9.407380 TGTGATAACATGGAGCACTTTATTTAT 57.593 29.630 16.23 0.00 0.00 1.40
580 581 8.673711 GTGTGATAACATGGAGCACTTTATTTA 58.326 33.333 16.23 0.00 0.00 1.40
581 582 7.176515 TGTGTGATAACATGGAGCACTTTATTT 59.823 33.333 16.23 0.00 0.00 1.40
582 583 6.658816 TGTGTGATAACATGGAGCACTTTATT 59.341 34.615 16.23 0.00 0.00 1.40
583 584 6.179756 TGTGTGATAACATGGAGCACTTTAT 58.820 36.000 16.23 1.94 0.00 1.40
584 585 5.555966 TGTGTGATAACATGGAGCACTTTA 58.444 37.500 16.23 3.82 0.00 1.85
585 586 4.397420 TGTGTGATAACATGGAGCACTTT 58.603 39.130 16.23 0.00 0.00 2.66
586 587 4.019792 TGTGTGATAACATGGAGCACTT 57.980 40.909 16.23 0.00 0.00 3.16
587 588 3.701205 TGTGTGATAACATGGAGCACT 57.299 42.857 16.23 0.00 0.00 4.40
588 589 5.528690 ACATATGTGTGATAACATGGAGCAC 59.471 40.000 7.78 10.39 40.93 4.40
589 590 5.683681 ACATATGTGTGATAACATGGAGCA 58.316 37.500 7.78 0.00 40.93 4.26
590 591 6.624352 AACATATGTGTGATAACATGGAGC 57.376 37.500 9.63 0.00 40.93 4.70
592 593 9.625747 ACAATAACATATGTGTGATAACATGGA 57.374 29.630 9.63 0.00 40.93 3.41
593 594 9.882996 GACAATAACATATGTGTGATAACATGG 57.117 33.333 9.63 0.00 40.93 3.66
594 595 9.882996 GGACAATAACATATGTGTGATAACATG 57.117 33.333 9.63 0.00 40.93 3.21
595 596 9.625747 TGGACAATAACATATGTGTGATAACAT 57.374 29.630 9.63 0.00 43.21 2.71
596 597 8.888716 GTGGACAATAACATATGTGTGATAACA 58.111 33.333 9.63 2.24 38.92 2.41
597 598 9.109393 AGTGGACAATAACATATGTGTGATAAC 57.891 33.333 9.63 8.79 38.92 1.89
601 602 9.981114 CTATAGTGGACAATAACATATGTGTGA 57.019 33.333 9.63 0.00 38.92 3.58
602 603 9.981114 TCTATAGTGGACAATAACATATGTGTG 57.019 33.333 9.63 10.56 38.92 3.82
604 605 9.645059 CCTCTATAGTGGACAATAACATATGTG 57.355 37.037 14.57 0.00 0.00 3.21
605 606 9.381038 ACCTCTATAGTGGACAATAACATATGT 57.619 33.333 24.32 1.41 33.21 2.29
610 611 9.925545 TTACTACCTCTATAGTGGACAATAACA 57.074 33.333 24.32 1.58 36.09 2.41
612 613 9.925545 TGTTACTACCTCTATAGTGGACAATAA 57.074 33.333 24.32 14.23 36.09 1.40
615 616 9.570468 CTATGTTACTACCTCTATAGTGGACAA 57.430 37.037 24.32 10.89 36.74 3.18
616 617 8.942033 TCTATGTTACTACCTCTATAGTGGACA 58.058 37.037 24.32 17.68 37.16 4.02
617 618 9.218440 GTCTATGTTACTACCTCTATAGTGGAC 57.782 40.741 24.32 13.34 36.09 4.02
618 619 9.168553 AGTCTATGTTACTACCTCTATAGTGGA 57.831 37.037 24.32 9.50 36.09 4.02
628 629 8.804204 GCCATGTTATAGTCTATGTTACTACCT 58.196 37.037 2.37 0.00 32.47 3.08
629 630 8.582437 TGCCATGTTATAGTCTATGTTACTACC 58.418 37.037 2.37 0.00 32.47 3.18
632 633 8.651389 ACATGCCATGTTATAGTCTATGTTACT 58.349 33.333 4.03 0.00 41.63 2.24
633 634 8.833231 ACATGCCATGTTATAGTCTATGTTAC 57.167 34.615 4.03 0.00 41.63 2.50
649 650 8.144478 AGTAACATAGACTAGTAACATGCCATG 58.856 37.037 2.40 2.40 0.00 3.66
650 651 8.251383 AGTAACATAGACTAGTAACATGCCAT 57.749 34.615 0.00 0.00 0.00 4.40
651 652 7.655521 AGTAACATAGACTAGTAACATGCCA 57.344 36.000 0.00 0.00 0.00 4.92
652 653 8.081025 GGTAGTAACATAGACTAGTAACATGCC 58.919 40.741 0.00 0.00 30.08 4.40
653 654 8.081025 GGGTAGTAACATAGACTAGTAACATGC 58.919 40.741 0.00 0.00 30.08 4.06
654 655 9.128404 TGGGTAGTAACATAGACTAGTAACATG 57.872 37.037 0.00 2.36 30.08 3.21
655 656 9.878737 ATGGGTAGTAACATAGACTAGTAACAT 57.121 33.333 0.00 0.00 30.08 2.71
656 657 9.705103 AATGGGTAGTAACATAGACTAGTAACA 57.295 33.333 0.00 0.00 30.08 2.41
668 669 9.435570 AAGACTAGTCATAATGGGTAGTAACAT 57.564 33.333 24.44 0.00 0.00 2.71
669 670 8.834004 AAGACTAGTCATAATGGGTAGTAACA 57.166 34.615 24.44 0.00 0.00 2.41
673 674 9.134055 GAAGTAAGACTAGTCATAATGGGTAGT 57.866 37.037 24.44 0.60 0.00 2.73
674 675 8.578151 GGAAGTAAGACTAGTCATAATGGGTAG 58.422 40.741 24.44 0.00 0.00 3.18
675 676 8.063153 TGGAAGTAAGACTAGTCATAATGGGTA 58.937 37.037 24.44 2.60 0.00 3.69
676 677 6.901300 TGGAAGTAAGACTAGTCATAATGGGT 59.099 38.462 24.44 2.03 0.00 4.51
677 678 7.070074 AGTGGAAGTAAGACTAGTCATAATGGG 59.930 40.741 24.44 0.00 0.00 4.00
678 679 7.923344 CAGTGGAAGTAAGACTAGTCATAATGG 59.077 40.741 24.44 0.81 0.00 3.16
679 680 8.470805 ACAGTGGAAGTAAGACTAGTCATAATG 58.529 37.037 24.44 8.62 0.00 1.90
680 681 8.470805 CACAGTGGAAGTAAGACTAGTCATAAT 58.529 37.037 24.44 13.58 0.00 1.28
681 682 7.093902 CCACAGTGGAAGTAAGACTAGTCATAA 60.094 40.741 24.44 6.69 40.96 1.90
682 683 6.377429 CCACAGTGGAAGTAAGACTAGTCATA 59.623 42.308 24.44 14.44 40.96 2.15
683 684 5.186021 CCACAGTGGAAGTAAGACTAGTCAT 59.814 44.000 24.44 15.53 40.96 3.06
684 685 4.523173 CCACAGTGGAAGTAAGACTAGTCA 59.477 45.833 24.44 1.95 40.96 3.41
685 686 4.082136 CCCACAGTGGAAGTAAGACTAGTC 60.082 50.000 22.37 15.41 40.96 2.59
686 687 3.833070 CCCACAGTGGAAGTAAGACTAGT 59.167 47.826 22.37 0.00 40.96 2.57
687 688 3.833070 ACCCACAGTGGAAGTAAGACTAG 59.167 47.826 22.37 1.79 40.96 2.57
688 689 3.853207 ACCCACAGTGGAAGTAAGACTA 58.147 45.455 22.37 0.00 40.96 2.59
689 690 2.690840 ACCCACAGTGGAAGTAAGACT 58.309 47.619 22.37 0.00 40.96 3.24
690 691 3.577415 ACTACCCACAGTGGAAGTAAGAC 59.423 47.826 22.37 0.00 40.96 3.01
691 692 3.830755 GACTACCCACAGTGGAAGTAAGA 59.169 47.826 22.37 0.00 40.96 2.10
692 693 3.833070 AGACTACCCACAGTGGAAGTAAG 59.167 47.826 22.37 12.12 40.96 2.34
693 694 3.853207 AGACTACCCACAGTGGAAGTAA 58.147 45.455 22.37 0.41 40.96 2.24
694 695 3.537795 AGACTACCCACAGTGGAAGTA 57.462 47.619 22.37 14.01 40.96 2.24
695 696 2.400467 AGACTACCCACAGTGGAAGT 57.600 50.000 22.37 21.83 40.96 3.01
696 697 4.283722 ACTTAAGACTACCCACAGTGGAAG 59.716 45.833 22.37 18.88 40.96 3.46
697 698 4.228824 ACTTAAGACTACCCACAGTGGAA 58.771 43.478 22.37 7.78 40.96 3.53
698 699 3.830755 GACTTAAGACTACCCACAGTGGA 59.169 47.826 22.37 0.31 40.96 4.02
699 700 3.833070 AGACTTAAGACTACCCACAGTGG 59.167 47.826 13.35 13.35 37.25 4.00
700 701 4.767928 AGAGACTTAAGACTACCCACAGTG 59.232 45.833 10.09 0.00 0.00 3.66
701 702 5.000570 AGAGACTTAAGACTACCCACAGT 57.999 43.478 10.09 0.00 0.00 3.55
702 703 5.477291 TCAAGAGACTTAAGACTACCCACAG 59.523 44.000 10.09 0.00 0.00 3.66
703 704 5.391256 TCAAGAGACTTAAGACTACCCACA 58.609 41.667 10.09 0.00 0.00 4.17
704 705 5.979288 TCAAGAGACTTAAGACTACCCAC 57.021 43.478 10.09 0.00 0.00 4.61
705 706 5.105310 GCATCAAGAGACTTAAGACTACCCA 60.105 44.000 10.09 0.00 0.00 4.51
706 707 5.128008 AGCATCAAGAGACTTAAGACTACCC 59.872 44.000 10.09 0.00 0.00 3.69
707 708 6.039616 CAGCATCAAGAGACTTAAGACTACC 58.960 44.000 10.09 0.00 0.00 3.18
708 709 5.518487 GCAGCATCAAGAGACTTAAGACTAC 59.482 44.000 10.09 3.25 0.00 2.73
709 710 5.420421 AGCAGCATCAAGAGACTTAAGACTA 59.580 40.000 10.09 0.00 0.00 2.59
710 711 4.222588 AGCAGCATCAAGAGACTTAAGACT 59.777 41.667 10.09 8.53 0.00 3.24
711 712 4.502962 AGCAGCATCAAGAGACTTAAGAC 58.497 43.478 10.09 2.62 0.00 3.01
712 713 4.815533 AGCAGCATCAAGAGACTTAAGA 57.184 40.909 10.09 0.00 0.00 2.10
713 714 5.871524 TGTAAGCAGCATCAAGAGACTTAAG 59.128 40.000 0.00 0.00 0.00 1.85
714 715 5.793817 TGTAAGCAGCATCAAGAGACTTAA 58.206 37.500 0.00 0.00 0.00 1.85
715 716 5.405935 TGTAAGCAGCATCAAGAGACTTA 57.594 39.130 0.00 0.00 0.00 2.24
716 717 4.252073 CTGTAAGCAGCATCAAGAGACTT 58.748 43.478 0.00 0.00 35.77 3.01
725 726 3.465990 TGCTCCTGTAAGCAGCATC 57.534 52.632 0.00 0.00 47.00 3.91
736 737 1.302033 GACACACACCCTGCTCCTG 60.302 63.158 0.00 0.00 0.00 3.86
739 740 0.679505 TACAGACACACACCCTGCTC 59.320 55.000 0.00 0.00 0.00 4.26
742 743 4.097437 ACGTATATACAGACACACACCCTG 59.903 45.833 13.22 0.00 0.00 4.45
751 752 5.803461 GCTCACAAACACGTATATACAGACA 59.197 40.000 13.22 0.00 0.00 3.41
761 786 1.497991 GCAGAGCTCACAAACACGTA 58.502 50.000 17.77 0.00 0.00 3.57
762 787 1.490693 CGCAGAGCTCACAAACACGT 61.491 55.000 17.77 0.00 0.00 4.49
839 864 9.736414 CCTGTATACTTATAGTTAGAGGCTACA 57.264 37.037 4.17 0.00 0.00 2.74
863 888 0.179018 GGGCATAAATGGAGCGTCCT 60.179 55.000 5.77 0.00 37.46 3.85
894 919 2.708325 GAGGATTGATGGTAGGGAAGCT 59.292 50.000 0.00 0.00 0.00 3.74
907 932 4.617253 TGAAAGGAGAAACGAGGATTGA 57.383 40.909 0.00 0.00 0.00 2.57
920 945 4.759183 CAGGGAGAGTTTTCTTGAAAGGAG 59.241 45.833 0.00 0.00 32.53 3.69
922 947 3.823304 CCAGGGAGAGTTTTCTTGAAAGG 59.177 47.826 0.00 0.00 32.53 3.11
923 948 4.464947 ACCAGGGAGAGTTTTCTTGAAAG 58.535 43.478 0.00 0.00 32.53 2.62
925 950 3.458118 TGACCAGGGAGAGTTTTCTTGAA 59.542 43.478 0.00 0.00 32.53 2.69
926 951 3.045634 TGACCAGGGAGAGTTTTCTTGA 58.954 45.455 0.00 0.00 32.53 3.02
927 952 3.492102 TGACCAGGGAGAGTTTTCTTG 57.508 47.619 0.00 0.00 32.53 3.02
928 953 4.731313 ATTGACCAGGGAGAGTTTTCTT 57.269 40.909 0.00 0.00 32.53 2.52
929 954 4.731313 AATTGACCAGGGAGAGTTTTCT 57.269 40.909 0.00 0.00 36.01 2.52
930 955 6.180472 TGATAATTGACCAGGGAGAGTTTTC 58.820 40.000 0.00 0.00 0.00 2.29
932 957 5.779241 TGATAATTGACCAGGGAGAGTTT 57.221 39.130 0.00 0.00 0.00 2.66
933 958 5.983333 ATGATAATTGACCAGGGAGAGTT 57.017 39.130 0.00 0.00 0.00 3.01
934 959 5.012561 GCTATGATAATTGACCAGGGAGAGT 59.987 44.000 0.00 0.00 0.00 3.24
935 960 5.248020 AGCTATGATAATTGACCAGGGAGAG 59.752 44.000 0.00 0.00 0.00 3.20
936 961 5.158141 AGCTATGATAATTGACCAGGGAGA 58.842 41.667 0.00 0.00 0.00 3.71
937 962 5.495926 AGCTATGATAATTGACCAGGGAG 57.504 43.478 0.00 0.00 0.00 4.30
938 963 5.912149 AAGCTATGATAATTGACCAGGGA 57.088 39.130 0.00 0.00 0.00 4.20
939 964 6.064060 TCAAAGCTATGATAATTGACCAGGG 58.936 40.000 0.00 0.00 0.00 4.45
940 965 6.994496 TCTCAAAGCTATGATAATTGACCAGG 59.006 38.462 0.00 0.00 0.00 4.45
941 966 8.085720 CTCTCAAAGCTATGATAATTGACCAG 57.914 38.462 0.00 0.00 0.00 4.00
958 983 1.209990 AGCTGGGAGATGCTCTCAAAG 59.790 52.381 13.06 10.62 45.12 2.77
959 984 1.283347 AGCTGGGAGATGCTCTCAAA 58.717 50.000 13.06 2.75 45.12 2.69
960 985 2.037901 CTAGCTGGGAGATGCTCTCAA 58.962 52.381 13.06 3.02 45.12 3.02
961 986 1.702182 CTAGCTGGGAGATGCTCTCA 58.298 55.000 13.06 0.00 45.12 3.27
962 987 0.318120 GCTAGCTGGGAGATGCTCTC 59.682 60.000 7.70 5.01 42.66 3.20
978 1003 2.236395 GGAGAACCTAGCTTGTTGGCTA 59.764 50.000 6.09 0.00 42.97 3.93
982 1007 3.012518 CCATGGAGAACCTAGCTTGTTG 58.987 50.000 5.56 0.00 37.04 3.33
998 1023 1.228521 TGGTTGTGCTGGTCCATGG 60.229 57.895 4.97 4.97 0.00 3.66
1212 1470 0.466543 ACCAGTAGAACACGTTGGCA 59.533 50.000 0.09 0.00 32.10 4.92
1356 1614 0.472925 TGTTGTAGGGAGAGGTGCCA 60.473 55.000 0.00 0.00 36.35 4.92
1687 1999 2.494471 AGTCATGCCCACACATCATTTG 59.506 45.455 0.00 0.00 0.00 2.32
1788 2104 1.191489 TCACTCCCGAATGTGCCTGA 61.191 55.000 0.00 0.00 34.49 3.86
1838 2154 3.744719 CGCTCGTTCACCGGGAGA 61.745 66.667 6.32 0.00 39.46 3.71
1929 2246 9.712359 GAACGAATACAAGATTACCAATTAACC 57.288 33.333 0.00 0.00 0.00 2.85
1940 2257 6.702329 ACTTGGAGAGAACGAATACAAGATT 58.298 36.000 0.00 0.00 37.75 2.40
1941 2258 6.153680 AGACTTGGAGAGAACGAATACAAGAT 59.846 38.462 0.00 0.00 37.75 2.40
1943 2260 5.715070 AGACTTGGAGAGAACGAATACAAG 58.285 41.667 0.00 0.00 39.60 3.16
1944 2261 5.477291 AGAGACTTGGAGAGAACGAATACAA 59.523 40.000 0.00 0.00 0.00 2.41
1946 2263 5.570234 AGAGACTTGGAGAGAACGAATAC 57.430 43.478 0.00 0.00 0.00 1.89
1948 2265 6.591750 TTTAGAGACTTGGAGAGAACGAAT 57.408 37.500 0.00 0.00 0.00 3.34
1949 2266 6.214399 GTTTTAGAGACTTGGAGAGAACGAA 58.786 40.000 0.00 0.00 0.00 3.85
1951 2268 4.617645 CGTTTTAGAGACTTGGAGAGAACG 59.382 45.833 0.00 0.00 0.00 3.95
1952 2269 4.386350 GCGTTTTAGAGACTTGGAGAGAAC 59.614 45.833 0.00 0.00 0.00 3.01
1953 2270 4.281182 AGCGTTTTAGAGACTTGGAGAGAA 59.719 41.667 0.00 0.00 0.00 2.87
1954 2271 3.827302 AGCGTTTTAGAGACTTGGAGAGA 59.173 43.478 0.00 0.00 0.00 3.10
1992 2634 9.042008 TCGATTTACTTAATGAAATACTGCCTC 57.958 33.333 0.00 0.00 0.00 4.70
1994 2636 8.609176 TGTCGATTTACTTAATGAAATACTGCC 58.391 33.333 0.00 0.00 0.00 4.85
2010 2652 8.893884 CGAGAGTAAATAGTCATGTCGATTTAC 58.106 37.037 25.95 25.95 41.54 2.01
2012 2654 7.481642 ACGAGAGTAAATAGTCATGTCGATTT 58.518 34.615 13.50 13.50 46.88 2.17
2034 2676 2.912771 ACAAACACACATGAGGAACGA 58.087 42.857 0.00 0.00 0.00 3.85
2042 2694 5.705441 ACCTGAATACCTACAAACACACATG 59.295 40.000 0.00 0.00 0.00 3.21
2045 2697 4.387862 CGACCTGAATACCTACAAACACAC 59.612 45.833 0.00 0.00 0.00 3.82
2087 2743 9.373450 ACCTTGATTCTTCTAATCTGCTAGATA 57.627 33.333 0.00 0.00 32.89 1.98
2095 2752 4.363999 CGCGACCTTGATTCTTCTAATCT 58.636 43.478 0.00 0.00 0.00 2.40
2127 2784 5.240183 GCTTGATTATAGCATCTTCCTTGCA 59.760 40.000 0.00 0.00 42.62 4.08
2142 2812 5.363101 TCGCTCTCATTGAAGCTTGATTAT 58.637 37.500 2.10 0.00 0.00 1.28
2194 2864 9.448438 ACTGATATGCAAGAACAACATTAGTAA 57.552 29.630 0.00 0.00 0.00 2.24
2238 2913 6.012508 ATGAACTCTCAAGGGAACCATTTCTA 60.013 38.462 0.00 0.00 42.72 2.10
2241 2916 5.003096 ATGAACTCTCAAGGGAACCATTT 57.997 39.130 0.00 0.00 42.72 2.32
2245 2920 4.293662 AGAATGAACTCTCAAGGGAACC 57.706 45.455 0.00 0.00 41.10 3.62
2248 2923 5.072329 ACTGAAAGAATGAACTCTCAAGGGA 59.928 40.000 0.00 0.00 37.43 4.20
2306 2982 8.665685 CGCAGAACTATTTGGTAACTTATTTCT 58.334 33.333 0.00 0.00 37.61 2.52
2334 3010 6.035327 GCAATGCAATAGAACCAAACAGATTC 59.965 38.462 0.00 0.00 0.00 2.52
2336 3012 5.047164 TGCAATGCAATAGAACCAAACAGAT 60.047 36.000 5.01 0.00 34.76 2.90
2338 3014 4.558178 TGCAATGCAATAGAACCAAACAG 58.442 39.130 5.01 0.00 34.76 3.16
2339 3015 4.597404 TGCAATGCAATAGAACCAAACA 57.403 36.364 5.01 0.00 34.76 2.83
2340 3016 7.035004 TCTAATGCAATGCAATAGAACCAAAC 58.965 34.615 25.53 0.00 44.68 2.93
2341 3017 7.167924 TCTAATGCAATGCAATAGAACCAAA 57.832 32.000 25.53 6.77 44.68 3.28
2342 3018 6.681120 GCTCTAATGCAATGCAATAGAACCAA 60.681 38.462 26.87 10.38 46.16 3.67
2343 3019 5.221106 GCTCTAATGCAATGCAATAGAACCA 60.221 40.000 26.87 10.68 46.16 3.67
2344 3020 5.218139 GCTCTAATGCAATGCAATAGAACC 58.782 41.667 26.87 19.01 46.16 3.62
2345 3021 5.684626 GTGCTCTAATGCAATGCAATAGAAC 59.315 40.000 26.87 23.73 46.16 3.01
2346 3022 5.221106 GGTGCTCTAATGCAATGCAATAGAA 60.221 40.000 26.87 15.02 46.16 2.10
2347 3023 4.276678 GGTGCTCTAATGCAATGCAATAGA 59.723 41.667 25.81 25.81 45.21 1.98
2348 3024 4.277672 AGGTGCTCTAATGCAATGCAATAG 59.722 41.667 20.93 20.93 45.12 1.73
2349 3025 4.209538 AGGTGCTCTAATGCAATGCAATA 58.790 39.130 13.45 7.52 45.12 1.90
2350 3026 3.028850 AGGTGCTCTAATGCAATGCAAT 58.971 40.909 13.45 6.50 45.12 3.56
2351 3027 2.449464 AGGTGCTCTAATGCAATGCAA 58.551 42.857 13.45 0.00 45.12 4.08
2352 3028 2.133281 AGGTGCTCTAATGCAATGCA 57.867 45.000 11.44 11.44 45.12 3.96
2353 3029 2.424601 TGAAGGTGCTCTAATGCAATGC 59.575 45.455 0.00 0.00 45.12 3.56
2354 3030 4.082625 TGTTGAAGGTGCTCTAATGCAATG 60.083 41.667 0.00 0.00 45.12 2.82
2355 3031 4.081406 TGTTGAAGGTGCTCTAATGCAAT 58.919 39.130 0.00 0.00 45.12 3.56
2356 3032 3.485394 TGTTGAAGGTGCTCTAATGCAA 58.515 40.909 0.00 0.00 45.12 4.08
2357 3033 3.076621 CTGTTGAAGGTGCTCTAATGCA 58.923 45.455 0.00 0.00 41.05 3.96
2358 3034 2.159462 GCTGTTGAAGGTGCTCTAATGC 60.159 50.000 0.00 0.00 0.00 3.56
2359 3035 3.076621 TGCTGTTGAAGGTGCTCTAATG 58.923 45.455 0.00 0.00 0.00 1.90
2360 3036 3.341823 CTGCTGTTGAAGGTGCTCTAAT 58.658 45.455 0.00 0.00 0.00 1.73
2361 3037 2.771089 CTGCTGTTGAAGGTGCTCTAA 58.229 47.619 0.00 0.00 0.00 2.10
2362 3038 1.609061 GCTGCTGTTGAAGGTGCTCTA 60.609 52.381 0.00 0.00 0.00 2.43
2363 3039 0.888285 GCTGCTGTTGAAGGTGCTCT 60.888 55.000 0.00 0.00 0.00 4.09
2364 3040 0.888285 AGCTGCTGTTGAAGGTGCTC 60.888 55.000 0.00 0.00 0.00 4.26
2365 3041 0.888285 GAGCTGCTGTTGAAGGTGCT 60.888 55.000 7.01 0.00 27.88 4.40
2366 3042 0.888285 AGAGCTGCTGTTGAAGGTGC 60.888 55.000 7.01 0.00 27.88 5.01
2367 3043 2.462456 TAGAGCTGCTGTTGAAGGTG 57.538 50.000 7.01 0.00 27.88 4.00
2368 3044 4.826274 TTATAGAGCTGCTGTTGAAGGT 57.174 40.909 7.01 0.00 31.01 3.50
2369 3045 5.931146 CCTATTATAGAGCTGCTGTTGAAGG 59.069 44.000 7.01 3.11 0.00 3.46
2370 3046 5.931146 CCCTATTATAGAGCTGCTGTTGAAG 59.069 44.000 7.01 0.00 0.00 3.02
2371 3047 5.743130 GCCCTATTATAGAGCTGCTGTTGAA 60.743 44.000 7.01 0.86 0.00 2.69
2372 3048 4.262635 GCCCTATTATAGAGCTGCTGTTGA 60.263 45.833 7.01 0.00 0.00 3.18
2373 3049 3.999663 GCCCTATTATAGAGCTGCTGTTG 59.000 47.826 7.01 0.00 0.00 3.33
2374 3050 3.648067 TGCCCTATTATAGAGCTGCTGTT 59.352 43.478 7.01 0.00 30.01 3.16
2375 3051 3.242867 TGCCCTATTATAGAGCTGCTGT 58.757 45.455 7.01 5.47 30.01 4.40
2376 3052 3.859443 CTGCCCTATTATAGAGCTGCTG 58.141 50.000 7.01 2.66 30.01 4.41
2377 3053 2.235898 GCTGCCCTATTATAGAGCTGCT 59.764 50.000 22.91 0.00 46.01 4.24
2378 3054 2.626840 GCTGCCCTATTATAGAGCTGC 58.373 52.381 18.07 18.07 44.28 5.25
2379 3055 3.859443 CTGCTGCCCTATTATAGAGCTG 58.141 50.000 7.24 7.62 32.88 4.24
2380 3056 2.235898 GCTGCTGCCCTATTATAGAGCT 59.764 50.000 7.24 0.00 30.01 4.09
2381 3057 2.626840 GCTGCTGCCCTATTATAGAGC 58.373 52.381 3.85 0.00 0.00 4.09
2439 3116 6.713762 ATATGGTTGTTGTTGGATATGTGG 57.286 37.500 0.00 0.00 0.00 4.17
2440 3117 8.849168 ACATATATGGTTGTTGTTGGATATGTG 58.151 33.333 16.96 0.00 37.67 3.21
2514 3191 1.942657 AGTGCTATGTATTTGCAGCCG 59.057 47.619 0.00 0.00 37.39 5.52
2538 3215 3.936203 TGGCTTTCCGGCAGTCGT 61.936 61.111 0.00 0.00 44.12 4.34
2546 3223 1.401018 CGGCTTAGTTTTGGCTTTCCG 60.401 52.381 0.00 0.00 34.14 4.30
2552 3229 1.212751 CAGGCGGCTTAGTTTTGGC 59.787 57.895 9.66 0.00 0.00 4.52
2628 3305 2.187946 GGGACGGCAGATCCAGTG 59.812 66.667 0.00 0.00 38.06 3.66
2647 3324 2.143122 GTTGCAGTCGATTGGAAGACA 58.857 47.619 14.96 0.00 39.67 3.41
2690 3368 3.818787 GAATGGGGTGCTGCAGCG 61.819 66.667 32.11 0.52 45.83 5.18
2742 3420 2.281761 GTGACAGTGGTGGCCAGG 60.282 66.667 5.11 0.00 32.34 4.45
2744 3422 2.510411 CAGTGACAGTGGTGGCCA 59.490 61.111 0.00 0.00 0.00 5.36
2745 3423 2.980233 GCAGTGACAGTGGTGGCC 60.980 66.667 12.19 0.00 0.00 5.36
2787 3465 1.602237 GCCGGAAGATGAGGGACAA 59.398 57.895 5.05 0.00 0.00 3.18
2788 3466 2.367202 GGCCGGAAGATGAGGGACA 61.367 63.158 5.05 0.00 0.00 4.02
2789 3467 2.506472 GGCCGGAAGATGAGGGAC 59.494 66.667 5.05 0.00 0.00 4.46
2805 3483 1.007271 ATATCACTTCGCCGCTCGG 60.007 57.895 3.56 3.56 39.05 4.63
2809 3487 1.269621 ACTACCATATCACTTCGCCGC 60.270 52.381 0.00 0.00 0.00 6.53
2814 3492 6.520272 AGATGCTTGACTACCATATCACTTC 58.480 40.000 0.00 0.00 0.00 3.01
2858 7227 9.612066 TTCACACAATATCATATACTTCAGCAA 57.388 29.630 0.00 0.00 0.00 3.91
2873 7242 7.054124 ACATCCCTACGAATTTCACACAATAT 58.946 34.615 0.00 0.00 0.00 1.28
2876 7245 4.647611 ACATCCCTACGAATTTCACACAA 58.352 39.130 0.00 0.00 0.00 3.33
2878 7247 6.920569 ATAACATCCCTACGAATTTCACAC 57.079 37.500 0.00 0.00 0.00 3.82
2960 7443 4.826733 ACACAATTACCAGATGCACTTCAA 59.173 37.500 0.00 0.00 0.00 2.69
2962 7445 5.376854 AACACAATTACCAGATGCACTTC 57.623 39.130 0.00 0.00 0.00 3.01
2965 7448 6.851609 TCAATAACACAATTACCAGATGCAC 58.148 36.000 0.00 0.00 0.00 4.57
3040 7523 9.829507 TGGAATTGAAATGAGTGTAACAAATTT 57.170 25.926 0.00 0.00 41.43 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.