Multiple sequence alignment - TraesCS3D01G073200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G073200 chr3D 100.000 2555 0 0 1 2555 33207452 33204898 0.000000e+00 4719.0
1 TraesCS3D01G073200 chr3D 89.655 87 8 1 1833 1919 33205532 33205447 2.690000e-20 110.0
2 TraesCS3D01G073200 chr3D 89.655 87 8 1 1921 2006 33205620 33205534 2.690000e-20 110.0
3 TraesCS3D01G073200 chr3B 91.111 900 47 16 913 1806 55772650 55771778 0.000000e+00 1188.0
4 TraesCS3D01G073200 chr3B 89.032 310 8 8 562 850 55772939 55772635 6.720000e-96 361.0
5 TraesCS3D01G073200 chr3B 90.526 190 16 2 19 207 55773937 55773749 1.520000e-62 250.0
6 TraesCS3D01G073200 chr3B 96.364 110 2 2 2447 2555 55744778 55744670 2.020000e-41 180.0
7 TraesCS3D01G073200 chr3B 86.585 82 11 0 1840 1921 55770797 55770716 9.730000e-15 91.6
8 TraesCS3D01G073200 chr3B 85.185 81 11 1 1927 2006 55770798 55770718 5.860000e-12 82.4
9 TraesCS3D01G073200 chr3A 96.662 659 9 4 913 1566 45709064 45708414 0.000000e+00 1083.0
10 TraesCS3D01G073200 chr3A 89.451 237 17 5 1690 1921 45708412 45708179 2.490000e-75 292.0
11 TraesCS3D01G073200 chr3A 88.679 212 14 5 2147 2348 45708202 45707991 1.520000e-62 250.0
12 TraesCS3D01G073200 chr3A 96.053 152 6 0 2007 2158 533634007 533633856 5.460000e-62 248.0
13 TraesCS3D01G073200 chr3A 94.631 149 8 0 2007 2155 659009073 659009221 5.500000e-57 231.0
14 TraesCS3D01G073200 chr3A 84.898 245 15 10 562 790 45709304 45709066 7.110000e-56 228.0
15 TraesCS3D01G073200 chr3A 87.629 97 11 1 2381 2476 45605401 45605305 7.470000e-21 111.0
16 TraesCS3D01G073200 chr3A 89.655 87 8 1 2447 2532 45604843 45604757 2.690000e-20 110.0
17 TraesCS3D01G073200 chr4D 82.495 497 84 3 1034 1528 2770206 2769711 1.400000e-117 433.0
18 TraesCS3D01G073200 chr4B 81.891 497 87 3 1034 1528 2380135 2379640 1.410000e-112 416.0
19 TraesCS3D01G073200 chr2D 96.053 152 6 0 2007 2158 11236916 11237067 5.460000e-62 248.0
20 TraesCS3D01G073200 chr2D 94.118 153 9 0 2007 2159 22219742 22219894 1.530000e-57 233.0
21 TraesCS3D01G073200 chr5B 92.262 168 13 0 1999 2166 587113109 587112942 3.290000e-59 239.0
22 TraesCS3D01G073200 chr6A 93.631 157 10 0 2007 2163 420380330 420380486 4.250000e-58 235.0
23 TraesCS3D01G073200 chr7A 94.118 153 9 0 2006 2158 684119781 684119629 1.530000e-57 233.0
24 TraesCS3D01G073200 chr7D 94.079 152 9 0 2007 2158 22653176 22653327 5.500000e-57 231.0
25 TraesCS3D01G073200 chr5D 93.548 155 10 0 2006 2160 379229990 379229836 5.500000e-57 231.0
26 TraesCS3D01G073200 chr1A 93.617 47 2 1 2361 2406 329235355 329235309 4.560000e-08 69.4
27 TraesCS3D01G073200 chr1A 97.297 37 0 1 2364 2399 41904064 41904100 7.630000e-06 62.1
28 TraesCS3D01G073200 chr5A 100.000 36 0 0 2363 2398 338414426 338414461 1.640000e-07 67.6
29 TraesCS3D01G073200 chr2A 100.000 34 0 0 2369 2402 434983682 434983649 2.120000e-06 63.9
30 TraesCS3D01G073200 chr2A 100.000 29 0 0 2363 2391 390881495 390881467 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G073200 chr3D 33204898 33207452 2554 True 1646.333333 4719 93.103333 1 2555 3 chr3D.!!$R1 2554
1 TraesCS3D01G073200 chr3B 55770716 55773937 3221 True 394.600000 1188 88.487800 19 2006 5 chr3B.!!$R2 1987
2 TraesCS3D01G073200 chr3A 45707991 45709304 1313 True 463.250000 1083 89.922500 562 2348 4 chr3A.!!$R3 1786

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
839 1404 0.035317 TCCATCCCTGACGCATATGC 59.965 55.0 18.08 18.08 37.78 3.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1952 3478 0.02877 GCGTGTGCAACTTTAGTGCA 59.971 50.0 0.0 0.0 42.15 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
151 153 3.361339 CGAAACACGTCTTCCAAACTACG 60.361 47.826 0.00 0.00 40.99 3.51
235 769 4.647424 TTTTCTGAATGGCACGAAAGTT 57.353 36.364 0.00 0.00 46.40 2.66
236 770 4.647424 TTTCTGAATGGCACGAAAGTTT 57.353 36.364 0.00 0.00 46.40 2.66
237 771 4.647424 TTCTGAATGGCACGAAAGTTTT 57.353 36.364 0.00 0.00 46.40 2.43
238 772 4.647424 TCTGAATGGCACGAAAGTTTTT 57.353 36.364 0.00 0.00 46.40 1.94
303 837 8.614469 TTTCTTTTTGAAAATGTCACAAACCT 57.386 26.923 3.89 0.00 41.23 3.50
304 838 8.614469 TTCTTTTTGAAAATGTCACAAACCTT 57.386 26.923 3.89 0.00 35.39 3.50
305 839 8.614469 TCTTTTTGAAAATGTCACAAACCTTT 57.386 26.923 3.89 0.00 35.39 3.11
306 840 9.061435 TCTTTTTGAAAATGTCACAAACCTTTT 57.939 25.926 3.89 0.00 38.09 2.27
307 841 9.676195 CTTTTTGAAAATGTCACAAACCTTTTT 57.324 25.926 0.00 0.00 36.29 1.94
308 842 9.670719 TTTTTGAAAATGTCACAAACCTTTTTC 57.329 25.926 6.60 6.60 36.29 2.29
309 843 8.614469 TTTGAAAATGTCACAAACCTTTTTCT 57.386 26.923 12.54 0.00 38.51 2.52
314 848 9.719355 AAAATGTCACAAACCTTTTTCTAAACT 57.281 25.926 0.00 0.00 33.52 2.66
315 849 8.702163 AATGTCACAAACCTTTTTCTAAACTG 57.298 30.769 0.00 0.00 0.00 3.16
319 853 8.188139 GTCACAAACCTTTTTCTAAACTGATCA 58.812 33.333 0.00 0.00 0.00 2.92
403 938 9.689976 TGTGAACAATATTTTTACACTTCATGG 57.310 29.630 13.30 0.00 0.00 3.66
413 950 7.867305 TTTTACACTTCATGGACACTGTAAA 57.133 32.000 0.00 2.58 34.09 2.01
431 968 7.594758 CACTGTAAATTCACGATGGACATTTTT 59.405 33.333 0.00 0.00 0.00 1.94
467 1004 9.884465 GCTAATGTGATGTTTGAAATATACTCC 57.116 33.333 0.00 0.00 0.00 3.85
470 1007 8.682936 ATGTGATGTTTGAAATATACTCCCTC 57.317 34.615 0.00 0.00 0.00 4.30
471 1008 7.861629 TGTGATGTTTGAAATATACTCCCTCT 58.138 34.615 0.00 0.00 0.00 3.69
473 1010 7.770897 GTGATGTTTGAAATATACTCCCTCTGT 59.229 37.037 0.00 0.00 0.00 3.41
474 1011 7.987458 TGATGTTTGAAATATACTCCCTCTGTC 59.013 37.037 0.00 0.00 0.00 3.51
475 1012 6.650120 TGTTTGAAATATACTCCCTCTGTCC 58.350 40.000 0.00 0.00 0.00 4.02
476 1013 5.888982 TTGAAATATACTCCCTCTGTCCC 57.111 43.478 0.00 0.00 0.00 4.46
477 1014 4.232091 TGAAATATACTCCCTCTGTCCCC 58.768 47.826 0.00 0.00 0.00 4.81
478 1015 4.232091 GAAATATACTCCCTCTGTCCCCA 58.768 47.826 0.00 0.00 0.00 4.96
479 1016 4.510303 AATATACTCCCTCTGTCCCCAT 57.490 45.455 0.00 0.00 0.00 4.00
480 1017 5.633473 AATATACTCCCTCTGTCCCCATA 57.367 43.478 0.00 0.00 0.00 2.74
481 1018 5.633473 ATATACTCCCTCTGTCCCCATAA 57.367 43.478 0.00 0.00 0.00 1.90
482 1019 2.897823 ACTCCCTCTGTCCCCATAAT 57.102 50.000 0.00 0.00 0.00 1.28
483 1020 2.412591 ACTCCCTCTGTCCCCATAATG 58.587 52.381 0.00 0.00 0.00 1.90
484 1021 2.293856 ACTCCCTCTGTCCCCATAATGT 60.294 50.000 0.00 0.00 0.00 2.71
485 1022 3.051341 ACTCCCTCTGTCCCCATAATGTA 60.051 47.826 0.00 0.00 0.00 2.29
486 1023 3.973973 CTCCCTCTGTCCCCATAATGTAA 59.026 47.826 0.00 0.00 0.00 2.41
487 1024 3.973973 TCCCTCTGTCCCCATAATGTAAG 59.026 47.826 0.00 0.00 0.00 2.34
488 1025 3.973973 CCCTCTGTCCCCATAATGTAAGA 59.026 47.826 0.00 0.00 0.00 2.10
489 1026 4.599241 CCCTCTGTCCCCATAATGTAAGAT 59.401 45.833 0.00 0.00 0.00 2.40
490 1027 5.280215 CCCTCTGTCCCCATAATGTAAGATC 60.280 48.000 0.00 0.00 0.00 2.75
491 1028 5.468540 TCTGTCCCCATAATGTAAGATCG 57.531 43.478 0.00 0.00 0.00 3.69
492 1029 4.899457 TCTGTCCCCATAATGTAAGATCGT 59.101 41.667 0.00 0.00 0.00 3.73
493 1030 5.365605 TCTGTCCCCATAATGTAAGATCGTT 59.634 40.000 0.00 0.00 0.00 3.85
494 1031 5.996644 TGTCCCCATAATGTAAGATCGTTT 58.003 37.500 0.00 0.00 0.00 3.60
495 1032 6.053005 TGTCCCCATAATGTAAGATCGTTTC 58.947 40.000 0.00 0.00 0.00 2.78
496 1033 6.126883 TGTCCCCATAATGTAAGATCGTTTCT 60.127 38.462 0.00 0.00 35.70 2.52
497 1034 6.424207 GTCCCCATAATGTAAGATCGTTTCTC 59.576 42.308 0.00 0.00 31.78 2.87
498 1035 6.099125 TCCCCATAATGTAAGATCGTTTCTCA 59.901 38.462 0.00 0.00 31.78 3.27
499 1036 6.765989 CCCCATAATGTAAGATCGTTTCTCAA 59.234 38.462 0.00 0.00 31.78 3.02
500 1037 7.041780 CCCCATAATGTAAGATCGTTTCTCAAG 60.042 40.741 0.00 0.00 31.78 3.02
501 1038 7.348201 CCATAATGTAAGATCGTTTCTCAAGC 58.652 38.462 0.00 0.00 31.78 4.01
502 1039 7.225538 CCATAATGTAAGATCGTTTCTCAAGCT 59.774 37.037 0.00 0.00 31.78 3.74
503 1040 9.249457 CATAATGTAAGATCGTTTCTCAAGCTA 57.751 33.333 0.00 0.00 31.78 3.32
504 1041 7.763172 AATGTAAGATCGTTTCTCAAGCTAG 57.237 36.000 0.00 0.00 31.78 3.42
505 1042 6.268825 TGTAAGATCGTTTCTCAAGCTAGT 57.731 37.500 0.00 0.00 31.78 2.57
506 1043 7.387119 TGTAAGATCGTTTCTCAAGCTAGTA 57.613 36.000 0.00 0.00 31.78 1.82
507 1044 7.997482 TGTAAGATCGTTTCTCAAGCTAGTAT 58.003 34.615 0.00 0.00 31.78 2.12
508 1045 8.129840 TGTAAGATCGTTTCTCAAGCTAGTATC 58.870 37.037 0.00 0.00 31.78 2.24
509 1046 6.952773 AGATCGTTTCTCAAGCTAGTATCT 57.047 37.500 0.00 0.00 0.00 1.98
510 1047 6.966021 AGATCGTTTCTCAAGCTAGTATCTC 58.034 40.000 0.00 0.00 0.00 2.75
737 1293 2.125106 GTCCGGTGATCCAGGCAC 60.125 66.667 0.00 0.00 35.56 5.01
785 1347 6.670695 AAACAAAGATTGGTTGCTCCTAAT 57.329 33.333 0.00 0.00 39.55 1.73
799 1361 1.191535 CCTAATATCGATCCCGGCCA 58.808 55.000 0.00 0.00 36.24 5.36
829 1394 2.356125 CCAACCAACTACTCCATCCCTG 60.356 54.545 0.00 0.00 0.00 4.45
833 1398 0.824759 AACTACTCCATCCCTGACGC 59.175 55.000 0.00 0.00 0.00 5.19
834 1399 0.324368 ACTACTCCATCCCTGACGCA 60.324 55.000 0.00 0.00 0.00 5.24
835 1400 1.043816 CTACTCCATCCCTGACGCAT 58.956 55.000 0.00 0.00 0.00 4.73
836 1401 2.239400 CTACTCCATCCCTGACGCATA 58.761 52.381 0.00 0.00 0.00 3.14
837 1402 1.722034 ACTCCATCCCTGACGCATAT 58.278 50.000 0.00 0.00 0.00 1.78
838 1403 1.345741 ACTCCATCCCTGACGCATATG 59.654 52.381 0.00 0.00 0.00 1.78
839 1404 0.035317 TCCATCCCTGACGCATATGC 59.965 55.000 18.08 18.08 37.78 3.14
840 1405 0.250424 CCATCCCTGACGCATATGCA 60.250 55.000 26.52 7.26 42.21 3.96
841 1406 1.612462 CCATCCCTGACGCATATGCAT 60.612 52.381 26.52 12.99 42.21 3.96
842 1407 1.467342 CATCCCTGACGCATATGCATG 59.533 52.381 26.52 16.18 42.21 4.06
843 1408 0.469494 TCCCTGACGCATATGCATGT 59.531 50.000 26.52 17.19 42.21 3.21
844 1409 0.870393 CCCTGACGCATATGCATGTC 59.130 55.000 26.52 23.89 42.21 3.06
845 1410 1.541889 CCCTGACGCATATGCATGTCT 60.542 52.381 26.52 3.70 42.21 3.41
846 1411 1.529865 CCTGACGCATATGCATGTCTG 59.470 52.381 26.52 24.71 42.21 3.51
847 1412 1.529865 CTGACGCATATGCATGTCTGG 59.470 52.381 26.52 17.25 42.21 3.86
848 1413 1.138661 TGACGCATATGCATGTCTGGA 59.861 47.619 26.52 8.87 42.21 3.86
849 1414 2.224354 TGACGCATATGCATGTCTGGAT 60.224 45.455 26.52 0.89 42.21 3.41
850 1415 2.810274 GACGCATATGCATGTCTGGATT 59.190 45.455 26.52 0.00 42.21 3.01
851 1416 3.216800 ACGCATATGCATGTCTGGATTT 58.783 40.909 26.52 0.00 42.21 2.17
852 1417 3.633525 ACGCATATGCATGTCTGGATTTT 59.366 39.130 26.52 0.00 42.21 1.82
853 1418 3.978855 CGCATATGCATGTCTGGATTTTG 59.021 43.478 26.52 2.00 42.21 2.44
854 1419 4.304110 GCATATGCATGTCTGGATTTTGG 58.696 43.478 22.84 0.00 41.59 3.28
855 1420 2.973694 ATGCATGTCTGGATTTTGGC 57.026 45.000 0.00 0.00 27.32 4.52
856 1421 0.896923 TGCATGTCTGGATTTTGGCC 59.103 50.000 0.00 0.00 0.00 5.36
857 1422 0.896923 GCATGTCTGGATTTTGGCCA 59.103 50.000 0.00 0.00 0.00 5.36
858 1423 1.404583 GCATGTCTGGATTTTGGCCAC 60.405 52.381 3.88 0.00 0.00 5.01
859 1424 1.894466 CATGTCTGGATTTTGGCCACA 59.106 47.619 3.88 0.00 0.00 4.17
860 1425 2.079170 TGTCTGGATTTTGGCCACAA 57.921 45.000 3.88 5.59 34.07 3.33
861 1426 1.962807 TGTCTGGATTTTGGCCACAAG 59.037 47.619 3.88 0.00 37.97 3.16
862 1427 0.968405 TCTGGATTTTGGCCACAAGC 59.032 50.000 11.46 11.46 37.97 4.01
863 1428 0.680618 CTGGATTTTGGCCACAAGCA 59.319 50.000 20.63 6.97 46.50 3.91
864 1429 1.276989 CTGGATTTTGGCCACAAGCAT 59.723 47.619 20.63 0.00 46.50 3.79
865 1430 1.275856 TGGATTTTGGCCACAAGCATC 59.724 47.619 20.63 8.49 46.50 3.91
866 1431 1.551883 GGATTTTGGCCACAAGCATCT 59.448 47.619 20.63 0.00 46.50 2.90
867 1432 2.027837 GGATTTTGGCCACAAGCATCTT 60.028 45.455 20.63 0.00 46.50 2.40
868 1433 3.557686 GGATTTTGGCCACAAGCATCTTT 60.558 43.478 20.63 0.00 46.50 2.52
869 1434 2.818130 TTTGGCCACAAGCATCTTTC 57.182 45.000 3.88 0.00 46.50 2.62
870 1435 1.702182 TTGGCCACAAGCATCTTTCA 58.298 45.000 3.88 0.00 46.50 2.69
871 1436 1.250328 TGGCCACAAGCATCTTTCAG 58.750 50.000 0.00 0.00 46.50 3.02
872 1437 1.202915 TGGCCACAAGCATCTTTCAGA 60.203 47.619 0.00 0.00 46.50 3.27
873 1438 2.097825 GGCCACAAGCATCTTTCAGAT 58.902 47.619 0.00 0.00 46.50 2.90
874 1439 7.522227 TTTGGCCACAAGCATCTTTCAGATG 62.522 44.000 3.88 9.08 46.50 2.90
883 1448 3.388308 CATCTTTCAGATGTAGAGGCCG 58.612 50.000 0.00 0.00 45.33 6.13
884 1449 1.757118 TCTTTCAGATGTAGAGGCCGG 59.243 52.381 0.00 0.00 0.00 6.13
885 1450 0.830648 TTTCAGATGTAGAGGCCGGG 59.169 55.000 2.18 0.00 0.00 5.73
886 1451 1.048724 TTCAGATGTAGAGGCCGGGG 61.049 60.000 2.18 0.00 0.00 5.73
887 1452 1.762460 CAGATGTAGAGGCCGGGGT 60.762 63.158 2.18 0.00 0.00 4.95
888 1453 1.762460 AGATGTAGAGGCCGGGGTG 60.762 63.158 2.18 0.00 0.00 4.61
889 1454 1.760875 GATGTAGAGGCCGGGGTGA 60.761 63.158 2.18 0.00 0.00 4.02
890 1455 1.749334 GATGTAGAGGCCGGGGTGAG 61.749 65.000 2.18 0.00 0.00 3.51
891 1456 3.851128 GTAGAGGCCGGGGTGAGC 61.851 72.222 2.18 0.00 0.00 4.26
898 1463 3.330720 CCGGGGTGAGCCTCCTTT 61.331 66.667 0.00 0.00 34.45 3.11
899 1464 2.757077 CGGGGTGAGCCTCCTTTT 59.243 61.111 0.00 0.00 34.45 2.27
900 1465 1.377333 CGGGGTGAGCCTCCTTTTC 60.377 63.158 0.00 0.00 34.45 2.29
901 1466 1.842381 CGGGGTGAGCCTCCTTTTCT 61.842 60.000 0.00 0.00 34.45 2.52
902 1467 1.286248 GGGGTGAGCCTCCTTTTCTA 58.714 55.000 0.00 0.00 34.45 2.10
903 1468 1.847088 GGGGTGAGCCTCCTTTTCTAT 59.153 52.381 0.00 0.00 34.45 1.98
904 1469 3.046374 GGGGTGAGCCTCCTTTTCTATA 58.954 50.000 0.00 0.00 34.45 1.31
905 1470 3.458487 GGGGTGAGCCTCCTTTTCTATAA 59.542 47.826 0.00 0.00 34.45 0.98
906 1471 4.079958 GGGGTGAGCCTCCTTTTCTATAAA 60.080 45.833 0.00 0.00 34.45 1.40
907 1472 5.506708 GGGTGAGCCTCCTTTTCTATAAAA 58.493 41.667 0.00 0.00 32.66 1.52
908 1473 5.949952 GGGTGAGCCTCCTTTTCTATAAAAA 59.050 40.000 0.00 0.00 32.98 1.94
980 1550 2.429571 GCACGACCGCACGAGTAA 60.430 61.111 6.49 0.00 37.03 2.24
1561 2134 0.449388 GCCGCCAAGATGAAGAAGTG 59.551 55.000 0.00 0.00 0.00 3.16
1638 2211 9.708222 CATTTCATTACTTTGTTAGGAGATTCG 57.292 33.333 0.00 0.00 0.00 3.34
1640 2213 9.932207 TTTCATTACTTTGTTAGGAGATTCGTA 57.068 29.630 0.00 0.00 0.00 3.43
1641 2214 8.922058 TCATTACTTTGTTAGGAGATTCGTAC 57.078 34.615 0.00 0.00 0.00 3.67
1642 2215 7.699391 TCATTACTTTGTTAGGAGATTCGTACG 59.301 37.037 9.53 9.53 0.00 3.67
1643 2216 5.633830 ACTTTGTTAGGAGATTCGTACGA 57.366 39.130 15.28 15.28 0.00 3.43
1644 2217 6.205101 ACTTTGTTAGGAGATTCGTACGAT 57.795 37.500 20.27 9.31 0.00 3.73
1645 2218 6.628185 ACTTTGTTAGGAGATTCGTACGATT 58.372 36.000 20.27 15.90 0.00 3.34
1646 2219 6.530534 ACTTTGTTAGGAGATTCGTACGATTG 59.469 38.462 20.27 1.93 0.00 2.67
1647 2220 4.928601 TGTTAGGAGATTCGTACGATTGG 58.071 43.478 20.27 0.00 0.00 3.16
1648 2221 4.641541 TGTTAGGAGATTCGTACGATTGGA 59.358 41.667 20.27 4.02 0.00 3.53
1649 2222 3.992260 AGGAGATTCGTACGATTGGAG 57.008 47.619 20.27 0.00 0.00 3.86
1650 2223 2.623889 AGGAGATTCGTACGATTGGAGG 59.376 50.000 20.27 0.00 0.00 4.30
1651 2224 2.621998 GGAGATTCGTACGATTGGAGGA 59.378 50.000 20.27 1.90 0.00 3.71
1652 2225 3.304794 GGAGATTCGTACGATTGGAGGAG 60.305 52.174 20.27 0.00 0.00 3.69
1665 2238 5.221185 CGATTGGAGGAGAACGGATTTACTA 60.221 44.000 0.00 0.00 0.00 1.82
1669 2242 6.579865 TGGAGGAGAACGGATTTACTAATTC 58.420 40.000 0.00 0.00 0.00 2.17
1701 2274 4.740695 GTCTCAGTCAACGCTATAACCATC 59.259 45.833 0.00 0.00 0.00 3.51
1730 2303 9.983804 AATTTTTAGGAGATTCGTACGATTTTC 57.016 29.630 20.27 18.63 0.00 2.29
1838 2416 1.134818 CAGTTGTATAGCCCGTCAGCA 60.135 52.381 0.00 0.00 34.23 4.41
1872 3398 2.223537 TGTCGATCGCATGCAACTAT 57.776 45.000 19.57 4.99 0.00 2.12
1889 3415 0.244178 TATAGTTGCACACACGCCGA 59.756 50.000 0.00 0.00 0.00 5.54
1921 3447 4.292186 ACAGTTGCACATCCTCTATTGT 57.708 40.909 0.00 0.00 0.00 2.71
1922 3448 4.256920 ACAGTTGCACATCCTCTATTGTC 58.743 43.478 0.00 0.00 0.00 3.18
1923 3449 4.256110 CAGTTGCACATCCTCTATTGTCA 58.744 43.478 0.00 0.00 0.00 3.58
1924 3450 4.331992 CAGTTGCACATCCTCTATTGTCAG 59.668 45.833 0.00 0.00 0.00 3.51
1925 3451 2.910199 TGCACATCCTCTATTGTCAGC 58.090 47.619 0.00 0.00 0.00 4.26
1926 3452 2.216898 GCACATCCTCTATTGTCAGCC 58.783 52.381 0.00 0.00 0.00 4.85
1927 3453 2.420547 GCACATCCTCTATTGTCAGCCA 60.421 50.000 0.00 0.00 0.00 4.75
1928 3454 3.201290 CACATCCTCTATTGTCAGCCAC 58.799 50.000 0.00 0.00 0.00 5.01
1929 3455 2.840038 ACATCCTCTATTGTCAGCCACA 59.160 45.455 0.00 0.00 0.00 4.17
1930 3456 3.201290 CATCCTCTATTGTCAGCCACAC 58.799 50.000 0.00 0.00 33.41 3.82
1931 3457 2.256306 TCCTCTATTGTCAGCCACACA 58.744 47.619 0.00 0.00 33.41 3.72
1932 3458 2.637382 TCCTCTATTGTCAGCCACACAA 59.363 45.455 0.00 0.00 38.12 3.33
1933 3459 2.744202 CCTCTATTGTCAGCCACACAAC 59.256 50.000 0.00 0.00 36.59 3.32
1934 3460 2.744202 CTCTATTGTCAGCCACACAACC 59.256 50.000 0.00 0.00 36.59 3.77
1935 3461 2.105649 TCTATTGTCAGCCACACAACCA 59.894 45.455 0.00 0.00 36.59 3.67
1936 3462 1.999648 ATTGTCAGCCACACAACCAT 58.000 45.000 0.00 0.00 36.59 3.55
1937 3463 1.317613 TTGTCAGCCACACAACCATC 58.682 50.000 0.00 0.00 33.41 3.51
1938 3464 0.473755 TGTCAGCCACACAACCATCT 59.526 50.000 0.00 0.00 0.00 2.90
1939 3465 1.160137 GTCAGCCACACAACCATCTC 58.840 55.000 0.00 0.00 0.00 2.75
1940 3466 1.059098 TCAGCCACACAACCATCTCT 58.941 50.000 0.00 0.00 0.00 3.10
1941 3467 1.421268 TCAGCCACACAACCATCTCTT 59.579 47.619 0.00 0.00 0.00 2.85
1942 3468 2.637382 TCAGCCACACAACCATCTCTTA 59.363 45.455 0.00 0.00 0.00 2.10
1943 3469 3.264193 TCAGCCACACAACCATCTCTTAT 59.736 43.478 0.00 0.00 0.00 1.73
1944 3470 3.624861 CAGCCACACAACCATCTCTTATC 59.375 47.826 0.00 0.00 0.00 1.75
1945 3471 2.609459 GCCACACAACCATCTCTTATCG 59.391 50.000 0.00 0.00 0.00 2.92
1946 3472 3.678806 GCCACACAACCATCTCTTATCGA 60.679 47.826 0.00 0.00 0.00 3.59
1947 3473 4.697514 CCACACAACCATCTCTTATCGAT 58.302 43.478 2.16 2.16 0.00 3.59
1948 3474 4.747108 CCACACAACCATCTCTTATCGATC 59.253 45.833 0.00 0.00 0.00 3.69
1949 3475 4.442403 CACACAACCATCTCTTATCGATCG 59.558 45.833 9.36 9.36 0.00 3.69
1950 3476 3.426859 CACAACCATCTCTTATCGATCGC 59.573 47.826 11.09 0.00 0.00 4.58
1951 3477 3.068165 ACAACCATCTCTTATCGATCGCA 59.932 43.478 11.09 0.00 0.00 5.10
1952 3478 4.240888 CAACCATCTCTTATCGATCGCAT 58.759 43.478 11.09 7.71 0.00 4.73
1953 3479 3.842820 ACCATCTCTTATCGATCGCATG 58.157 45.455 11.09 3.33 0.00 4.06
1954 3480 2.602211 CCATCTCTTATCGATCGCATGC 59.398 50.000 11.09 7.91 0.00 4.06
1955 3481 3.248266 CATCTCTTATCGATCGCATGCA 58.752 45.455 19.57 5.34 0.00 3.96
1956 3482 2.666026 TCTCTTATCGATCGCATGCAC 58.334 47.619 19.57 7.45 0.00 4.57
1957 3483 2.294512 TCTCTTATCGATCGCATGCACT 59.705 45.455 19.57 3.19 0.00 4.40
1958 3484 3.502211 TCTCTTATCGATCGCATGCACTA 59.498 43.478 19.57 2.29 0.00 2.74
1959 3485 4.023193 TCTCTTATCGATCGCATGCACTAA 60.023 41.667 19.57 0.00 0.00 2.24
1960 3486 4.616953 TCTTATCGATCGCATGCACTAAA 58.383 39.130 19.57 0.00 0.00 1.85
1961 3487 4.681483 TCTTATCGATCGCATGCACTAAAG 59.319 41.667 19.57 10.91 0.00 1.85
1962 3488 2.293677 TCGATCGCATGCACTAAAGT 57.706 45.000 19.57 0.00 0.00 2.66
1963 3489 2.616960 TCGATCGCATGCACTAAAGTT 58.383 42.857 19.57 0.00 0.00 2.66
1964 3490 2.348362 TCGATCGCATGCACTAAAGTTG 59.652 45.455 19.57 0.00 0.00 3.16
1965 3491 2.444351 GATCGCATGCACTAAAGTTGC 58.556 47.619 19.57 0.00 0.00 4.17
1966 3492 1.233919 TCGCATGCACTAAAGTTGCA 58.766 45.000 19.57 0.00 43.04 4.08
1967 3493 1.069296 TCGCATGCACTAAAGTTGCAC 60.069 47.619 19.57 0.00 41.61 4.57
1968 3494 1.334870 CGCATGCACTAAAGTTGCACA 60.335 47.619 19.57 0.00 41.61 4.57
1969 3495 2.053627 GCATGCACTAAAGTTGCACAC 58.946 47.619 14.21 0.00 41.61 3.82
1970 3496 2.309693 CATGCACTAAAGTTGCACACG 58.690 47.619 0.00 0.00 41.61 4.49
1971 3497 0.028770 TGCACTAAAGTTGCACACGC 59.971 50.000 0.00 0.00 39.24 5.34
1972 3498 0.991770 GCACTAAAGTTGCACACGCG 60.992 55.000 3.53 3.53 42.97 6.01
1973 3499 0.303493 CACTAAAGTTGCACACGCGT 59.697 50.000 5.58 5.58 42.97 6.01
1974 3500 0.580104 ACTAAAGTTGCACACGCGTC 59.420 50.000 9.86 0.00 42.97 5.19
1975 3501 0.448861 CTAAAGTTGCACACGCGTCG 60.449 55.000 9.86 8.08 42.97 5.12
1976 3502 1.823260 TAAAGTTGCACACGCGTCGG 61.823 55.000 9.86 5.35 42.97 4.79
1987 3513 4.036804 GCGTCGGCCATGCAACAA 62.037 61.111 2.24 0.00 36.94 2.83
1988 3514 2.126888 CGTCGGCCATGCAACAAC 60.127 61.111 2.24 0.00 0.00 3.32
1989 3515 2.902419 CGTCGGCCATGCAACAACA 61.902 57.895 2.24 0.00 0.00 3.33
1990 3516 1.081242 GTCGGCCATGCAACAACAG 60.081 57.895 2.24 0.00 0.00 3.16
1991 3517 1.528076 TCGGCCATGCAACAACAGT 60.528 52.632 2.24 0.00 0.00 3.55
1992 3518 1.106351 TCGGCCATGCAACAACAGTT 61.106 50.000 2.24 0.00 0.00 3.16
1993 3519 0.940519 CGGCCATGCAACAACAGTTG 60.941 55.000 12.03 12.03 44.22 3.16
2002 3528 3.004024 CAACAACAGTTGCACATCCTC 57.996 47.619 13.56 0.00 36.56 3.71
2003 3529 2.620115 CAACAACAGTTGCACATCCTCT 59.380 45.455 13.56 0.00 36.56 3.69
2004 3530 3.769739 ACAACAGTTGCACATCCTCTA 57.230 42.857 13.56 0.00 0.00 2.43
2005 3531 4.292186 ACAACAGTTGCACATCCTCTAT 57.708 40.909 13.56 0.00 0.00 1.98
2006 3532 4.005650 ACAACAGTTGCACATCCTCTATG 58.994 43.478 13.56 0.00 41.74 2.23
2007 3533 4.256110 CAACAGTTGCACATCCTCTATGA 58.744 43.478 0.00 0.00 39.07 2.15
2008 3534 4.134379 ACAGTTGCACATCCTCTATGAG 57.866 45.455 0.00 0.00 39.07 2.90
2011 3537 2.526545 GCACATCCTCTATGAGCGC 58.473 57.895 0.00 0.00 41.38 5.92
2012 3538 0.033228 GCACATCCTCTATGAGCGCT 59.967 55.000 11.27 11.27 41.38 5.92
2013 3539 1.780806 CACATCCTCTATGAGCGCTG 58.219 55.000 18.48 0.00 39.07 5.18
2014 3540 0.033228 ACATCCTCTATGAGCGCTGC 59.967 55.000 18.48 7.36 39.07 5.25
2015 3541 0.317799 CATCCTCTATGAGCGCTGCT 59.682 55.000 18.48 3.58 43.88 4.24
2016 3542 1.543358 CATCCTCTATGAGCGCTGCTA 59.457 52.381 18.48 4.81 39.88 3.49
2017 3543 0.955178 TCCTCTATGAGCGCTGCTAC 59.045 55.000 18.48 0.00 39.88 3.58
2018 3544 0.386605 CCTCTATGAGCGCTGCTACG 60.387 60.000 18.48 0.00 39.88 3.51
2029 3555 3.184206 TGCTACGCAGACGACGAT 58.816 55.556 0.00 0.00 43.93 3.73
2030 3556 1.226295 TGCTACGCAGACGACGATG 60.226 57.895 0.00 0.67 43.93 3.84
2031 3557 2.568912 GCTACGCAGACGACGATGC 61.569 63.158 16.32 16.32 43.93 3.91
2036 3562 4.829518 CAGACGACGATGCGCGGA 62.830 66.667 8.83 5.00 46.49 5.54
2037 3563 4.831307 AGACGACGATGCGCGGAC 62.831 66.667 8.83 0.00 46.49 4.79
2041 3567 2.954868 GACGATGCGCGGACGATT 60.955 61.111 23.67 0.08 46.49 3.34
2042 3568 2.508439 ACGATGCGCGGACGATTT 60.508 55.556 23.67 0.00 46.49 2.17
2043 3569 2.053984 CGATGCGCGGACGATTTG 60.054 61.111 8.83 0.00 43.93 2.32
2044 3570 2.351210 GATGCGCGGACGATTTGC 60.351 61.111 8.83 0.00 43.93 3.68
2050 3576 3.474904 CGGACGATTTGCGCACGA 61.475 61.111 23.36 10.39 46.04 4.35
2051 3577 2.095843 GGACGATTTGCGCACGAC 59.904 61.111 23.36 17.28 46.04 4.34
2052 3578 2.275202 GACGATTTGCGCACGACG 60.275 61.111 23.36 22.34 46.04 5.12
2061 3587 4.489795 CGCACGACGCTGCACATC 62.490 66.667 18.03 0.00 36.94 3.06
2062 3588 3.413861 GCACGACGCTGCACATCA 61.414 61.111 14.68 0.00 37.11 3.07
2063 3589 2.774126 CACGACGCTGCACATCAG 59.226 61.111 0.00 0.00 45.62 2.90
2064 3590 2.433145 ACGACGCTGCACATCAGG 60.433 61.111 0.00 0.00 43.06 3.86
2065 3591 2.433145 CGACGCTGCACATCAGGT 60.433 61.111 0.00 0.00 43.06 4.00
2066 3592 2.447887 CGACGCTGCACATCAGGTC 61.448 63.158 0.00 0.00 43.06 3.85
2067 3593 2.433145 ACGCTGCACATCAGGTCG 60.433 61.111 0.00 0.00 43.06 4.79
2068 3594 2.433145 CGCTGCACATCAGGTCGT 60.433 61.111 0.00 0.00 43.06 4.34
2069 3595 2.447887 CGCTGCACATCAGGTCGTC 61.448 63.158 0.00 0.00 43.06 4.20
2070 3596 2.103042 GCTGCACATCAGGTCGTCC 61.103 63.158 0.00 0.00 43.06 4.79
2071 3597 1.293179 CTGCACATCAGGTCGTCCA 59.707 57.895 0.51 0.00 39.15 4.02
2072 3598 0.107993 CTGCACATCAGGTCGTCCAT 60.108 55.000 0.51 0.00 39.15 3.41
2073 3599 0.391528 TGCACATCAGGTCGTCCATG 60.392 55.000 0.51 0.00 35.89 3.66
2074 3600 0.391661 GCACATCAGGTCGTCCATGT 60.392 55.000 0.51 0.15 32.72 3.21
2075 3601 1.134818 GCACATCAGGTCGTCCATGTA 60.135 52.381 0.51 0.00 31.76 2.29
2076 3602 2.483714 GCACATCAGGTCGTCCATGTAT 60.484 50.000 0.51 0.00 31.76 2.29
2077 3603 3.243737 GCACATCAGGTCGTCCATGTATA 60.244 47.826 0.51 0.00 31.76 1.47
2078 3604 4.561530 GCACATCAGGTCGTCCATGTATAT 60.562 45.833 0.51 0.00 31.76 0.86
2079 3605 5.164233 CACATCAGGTCGTCCATGTATATC 58.836 45.833 0.51 0.00 31.76 1.63
2080 3606 4.832823 ACATCAGGTCGTCCATGTATATCA 59.167 41.667 0.51 0.00 31.38 2.15
2081 3607 5.481824 ACATCAGGTCGTCCATGTATATCAT 59.518 40.000 0.51 0.00 37.22 2.45
2082 3608 5.644977 TCAGGTCGTCCATGTATATCATC 57.355 43.478 0.51 0.00 34.09 2.92
2083 3609 4.156008 TCAGGTCGTCCATGTATATCATCG 59.844 45.833 0.51 0.00 34.09 3.84
2084 3610 4.156008 CAGGTCGTCCATGTATATCATCGA 59.844 45.833 0.51 0.00 34.09 3.59
2085 3611 4.765339 AGGTCGTCCATGTATATCATCGAA 59.235 41.667 0.51 0.00 34.04 3.71
2086 3612 5.096169 GGTCGTCCATGTATATCATCGAAG 58.904 45.833 0.00 0.00 34.04 3.79
2087 3613 5.335740 GGTCGTCCATGTATATCATCGAAGT 60.336 44.000 0.00 0.00 34.04 3.01
2088 3614 5.795939 GTCGTCCATGTATATCATCGAAGTC 59.204 44.000 0.00 0.00 34.04 3.01
2089 3615 5.096169 CGTCCATGTATATCATCGAAGTCC 58.904 45.833 0.00 0.00 34.09 3.85
2090 3616 5.335661 CGTCCATGTATATCATCGAAGTCCA 60.336 44.000 0.00 0.00 34.09 4.02
2091 3617 6.096036 GTCCATGTATATCATCGAAGTCCAG 58.904 44.000 0.00 0.00 34.09 3.86
2092 3618 5.775195 TCCATGTATATCATCGAAGTCCAGT 59.225 40.000 0.00 0.00 34.09 4.00
2093 3619 5.866092 CCATGTATATCATCGAAGTCCAGTG 59.134 44.000 0.00 0.00 34.09 3.66
2094 3620 5.453567 TGTATATCATCGAAGTCCAGTGG 57.546 43.478 1.40 1.40 0.00 4.00
2095 3621 5.137551 TGTATATCATCGAAGTCCAGTGGA 58.862 41.667 8.12 8.12 0.00 4.02
2096 3622 6.294787 ATGTATATCATCGAAGTCCAGTGGAC 60.295 42.308 31.54 31.54 41.79 4.02
2097 3623 9.384237 ATGTATATCATCGAAGTCCAGTGGACG 62.384 44.444 31.76 22.47 44.21 4.79
2103 3629 3.373226 GTCCAGTGGACGGCTGTA 58.627 61.111 26.12 0.00 43.14 2.74
2104 3630 1.898154 GTCCAGTGGACGGCTGTAT 59.102 57.895 26.12 0.00 43.14 2.29
2105 3631 0.460284 GTCCAGTGGACGGCTGTATG 60.460 60.000 26.12 0.00 43.14 2.39
2106 3632 0.902984 TCCAGTGGACGGCTGTATGT 60.903 55.000 8.12 0.00 32.41 2.29
2107 3633 0.740868 CCAGTGGACGGCTGTATGTG 60.741 60.000 1.68 0.00 32.41 3.21
2108 3634 0.740868 CAGTGGACGGCTGTATGTGG 60.741 60.000 0.00 0.00 0.00 4.17
2109 3635 2.106683 GTGGACGGCTGTATGTGGC 61.107 63.158 0.00 0.00 0.00 5.01
2110 3636 2.267642 GGACGGCTGTATGTGGCA 59.732 61.111 0.00 0.00 0.00 4.92
2111 3637 1.153168 GGACGGCTGTATGTGGCAT 60.153 57.895 0.00 0.00 0.00 4.40
2112 3638 1.160329 GGACGGCTGTATGTGGCATC 61.160 60.000 0.00 0.00 0.00 3.91
2113 3639 1.490693 GACGGCTGTATGTGGCATCG 61.491 60.000 0.00 0.00 0.00 3.84
2114 3640 1.521457 CGGCTGTATGTGGCATCGT 60.521 57.895 0.00 0.00 0.00 3.73
2115 3641 1.490693 CGGCTGTATGTGGCATCGTC 61.491 60.000 0.00 0.00 0.00 4.20
2116 3642 1.160329 GGCTGTATGTGGCATCGTCC 61.160 60.000 0.00 0.00 0.00 4.79
2117 3643 0.461870 GCTGTATGTGGCATCGTCCA 60.462 55.000 0.00 0.00 0.00 4.02
2118 3644 2.011548 GCTGTATGTGGCATCGTCCAA 61.012 52.381 0.00 0.00 37.96 3.53
2119 3645 1.665679 CTGTATGTGGCATCGTCCAAC 59.334 52.381 0.00 0.00 37.96 3.77
2120 3646 1.277842 TGTATGTGGCATCGTCCAACT 59.722 47.619 0.00 0.00 37.96 3.16
2121 3647 1.665679 GTATGTGGCATCGTCCAACTG 59.334 52.381 0.00 0.00 37.96 3.16
2122 3648 0.036732 ATGTGGCATCGTCCAACTGT 59.963 50.000 0.00 0.00 37.96 3.55
2123 3649 0.602638 TGTGGCATCGTCCAACTGTC 60.603 55.000 0.00 0.00 37.96 3.51
2124 3650 1.374125 TGGCATCGTCCAACTGTCG 60.374 57.895 0.00 0.00 32.18 4.35
2125 3651 1.374252 GGCATCGTCCAACTGTCGT 60.374 57.895 0.00 0.00 0.00 4.34
2126 3652 1.626654 GGCATCGTCCAACTGTCGTG 61.627 60.000 0.00 0.00 0.00 4.35
2127 3653 1.781555 CATCGTCCAACTGTCGTGC 59.218 57.895 0.00 0.00 0.00 5.34
2128 3654 1.733041 ATCGTCCAACTGTCGTGCG 60.733 57.895 0.00 0.00 0.00 5.34
2129 3655 2.137425 ATCGTCCAACTGTCGTGCGA 62.137 55.000 0.00 0.00 0.00 5.10
2130 3656 1.733041 CGTCCAACTGTCGTGCGAT 60.733 57.895 0.00 0.00 0.00 4.58
2131 3657 1.674611 CGTCCAACTGTCGTGCGATC 61.675 60.000 0.00 0.00 0.00 3.69
2132 3658 1.443702 TCCAACTGTCGTGCGATCG 60.444 57.895 11.69 11.69 0.00 3.69
2133 3659 1.443702 CCAACTGTCGTGCGATCGA 60.444 57.895 21.57 0.59 37.51 3.59
2134 3660 0.802222 CCAACTGTCGTGCGATCGAT 60.802 55.000 21.57 0.00 41.78 3.59
2135 3661 0.567968 CAACTGTCGTGCGATCGATC 59.432 55.000 21.57 15.68 41.78 3.69
2136 3662 0.452184 AACTGTCGTGCGATCGATCT 59.548 50.000 21.57 0.00 41.78 2.75
2137 3663 1.296727 ACTGTCGTGCGATCGATCTA 58.703 50.000 21.57 9.26 41.78 1.98
2138 3664 1.874231 ACTGTCGTGCGATCGATCTAT 59.126 47.619 21.57 0.00 41.78 1.98
2139 3665 2.096169 ACTGTCGTGCGATCGATCTATC 60.096 50.000 21.57 11.99 41.78 2.08
2151 3677 3.879932 CGATCTATCGTCTGTACAGCA 57.120 47.619 18.45 4.79 44.74 4.41
2152 3678 4.411993 CGATCTATCGTCTGTACAGCAT 57.588 45.455 18.45 11.65 44.74 3.79
2153 3679 4.788690 CGATCTATCGTCTGTACAGCATT 58.211 43.478 18.45 5.47 44.74 3.56
2154 3680 5.215903 CGATCTATCGTCTGTACAGCATTT 58.784 41.667 18.45 5.81 44.74 2.32
2155 3681 5.687730 CGATCTATCGTCTGTACAGCATTTT 59.312 40.000 18.45 4.45 44.74 1.82
2156 3682 6.129326 CGATCTATCGTCTGTACAGCATTTTC 60.129 42.308 18.45 6.43 44.74 2.29
2157 3683 5.034797 TCTATCGTCTGTACAGCATTTTCG 58.965 41.667 18.45 13.85 0.00 3.46
2158 3684 3.291809 TCGTCTGTACAGCATTTTCGA 57.708 42.857 18.45 15.60 0.00 3.71
2159 3685 3.845178 TCGTCTGTACAGCATTTTCGAT 58.155 40.909 18.45 0.00 0.00 3.59
2160 3686 3.857665 TCGTCTGTACAGCATTTTCGATC 59.142 43.478 18.45 0.00 0.00 3.69
2161 3687 3.000322 CGTCTGTACAGCATTTTCGATCC 60.000 47.826 18.45 0.00 0.00 3.36
2162 3688 4.184629 GTCTGTACAGCATTTTCGATCCT 58.815 43.478 18.45 0.00 0.00 3.24
2163 3689 4.268884 GTCTGTACAGCATTTTCGATCCTC 59.731 45.833 18.45 0.00 0.00 3.71
2164 3690 4.160439 TCTGTACAGCATTTTCGATCCTCT 59.840 41.667 18.45 0.00 0.00 3.69
2165 3691 5.359860 TCTGTACAGCATTTTCGATCCTCTA 59.640 40.000 18.45 0.00 0.00 2.43
2203 3729 4.443621 CAGTTGCACATCTCTCATCAGAT 58.556 43.478 0.00 0.00 33.00 2.90
2291 3826 2.920647 GCAAAACGTCCTATGTTGGTGC 60.921 50.000 0.00 5.62 34.19 5.01
2327 3862 7.696872 TGAGATTTAGTTAAACTCACTCGATCG 59.303 37.037 9.36 9.36 33.10 3.69
2348 3883 7.904977 CGATCGACATCAACTTTGTTTCAATAT 59.095 33.333 10.26 0.00 0.00 1.28
2349 3884 9.559958 GATCGACATCAACTTTGTTTCAATATT 57.440 29.630 0.00 0.00 0.00 1.28
2350 3885 8.726650 TCGACATCAACTTTGTTTCAATATTG 57.273 30.769 9.29 9.29 0.00 1.90
2351 3886 7.807433 TCGACATCAACTTTGTTTCAATATTGG 59.193 33.333 15.36 0.22 0.00 3.16
2352 3887 7.807433 CGACATCAACTTTGTTTCAATATTGGA 59.193 33.333 15.36 3.64 0.00 3.53
2353 3888 9.474920 GACATCAACTTTGTTTCAATATTGGAA 57.525 29.630 15.36 10.41 0.00 3.53
2354 3889 9.829507 ACATCAACTTTGTTTCAATATTGGAAA 57.170 25.926 10.85 9.26 32.18 3.13
2360 3895 4.181309 GTTTCAATATTGGAAACCGGCA 57.819 40.909 20.93 0.00 45.17 5.69
2361 3896 4.173256 GTTTCAATATTGGAAACCGGCAG 58.827 43.478 20.93 0.00 45.17 4.85
2362 3897 3.080300 TCAATATTGGAAACCGGCAGT 57.920 42.857 15.36 0.00 0.00 4.40
2363 3898 4.223556 TCAATATTGGAAACCGGCAGTA 57.776 40.909 15.36 0.00 0.00 2.74
2364 3899 3.942748 TCAATATTGGAAACCGGCAGTAC 59.057 43.478 15.36 0.00 0.00 2.73
2365 3900 3.926058 ATATTGGAAACCGGCAGTACT 57.074 42.857 0.00 0.00 0.00 2.73
2366 3901 2.109425 ATTGGAAACCGGCAGTACTC 57.891 50.000 0.00 0.00 0.00 2.59
2367 3902 0.035739 TTGGAAACCGGCAGTACTCC 59.964 55.000 0.00 0.00 33.14 3.85
2368 3903 1.078637 GGAAACCGGCAGTACTCCC 60.079 63.158 0.00 0.00 0.00 4.30
2369 3904 1.551019 GGAAACCGGCAGTACTCCCT 61.551 60.000 0.00 0.00 0.00 4.20
2370 3905 0.108281 GAAACCGGCAGTACTCCCTC 60.108 60.000 0.00 0.00 0.00 4.30
2371 3906 1.551019 AAACCGGCAGTACTCCCTCC 61.551 60.000 0.00 0.00 0.00 4.30
2372 3907 3.528370 CCGGCAGTACTCCCTCCG 61.528 72.222 0.28 8.14 39.79 4.63
2373 3908 2.754658 CGGCAGTACTCCCTCCGT 60.755 66.667 0.28 0.00 35.75 4.69
2374 3909 2.772691 CGGCAGTACTCCCTCCGTC 61.773 68.421 0.28 0.00 35.75 4.79
2375 3910 2.424733 GGCAGTACTCCCTCCGTCC 61.425 68.421 0.00 0.00 0.00 4.79
2376 3911 2.424733 GCAGTACTCCCTCCGTCCC 61.425 68.421 0.00 0.00 0.00 4.46
2377 3912 1.000019 CAGTACTCCCTCCGTCCCA 60.000 63.158 0.00 0.00 0.00 4.37
2378 3913 1.000107 AGTACTCCCTCCGTCCCAC 60.000 63.158 0.00 0.00 0.00 4.61
2379 3914 2.044650 TACTCCCTCCGTCCCACG 60.045 66.667 0.00 0.00 42.11 4.94
2380 3915 2.605607 TACTCCCTCCGTCCCACGA 61.606 63.158 0.00 0.00 46.05 4.35
2381 3916 1.929860 TACTCCCTCCGTCCCACGAT 61.930 60.000 0.00 0.00 46.05 3.73
2382 3917 1.152819 CTCCCTCCGTCCCACGATA 60.153 63.158 0.00 0.00 46.05 2.92
2383 3918 0.539901 CTCCCTCCGTCCCACGATAT 60.540 60.000 0.00 0.00 46.05 1.63
2384 3919 0.773014 TCCCTCCGTCCCACGATATA 59.227 55.000 0.00 0.00 46.05 0.86
2385 3920 1.145531 TCCCTCCGTCCCACGATATAA 59.854 52.381 0.00 0.00 46.05 0.98
2386 3921 1.544691 CCCTCCGTCCCACGATATAAG 59.455 57.143 0.00 0.00 46.05 1.73
2387 3922 2.511659 CCTCCGTCCCACGATATAAGA 58.488 52.381 0.00 0.00 46.05 2.10
2388 3923 2.228343 CCTCCGTCCCACGATATAAGAC 59.772 54.545 0.00 0.00 46.05 3.01
2389 3924 1.875514 TCCGTCCCACGATATAAGACG 59.124 52.381 4.00 4.00 46.05 4.18
2390 3925 1.605710 CCGTCCCACGATATAAGACGT 59.394 52.381 9.63 0.00 46.05 4.34
2391 3926 2.033801 CCGTCCCACGATATAAGACGTT 59.966 50.000 9.63 0.00 46.05 3.99
2392 3927 3.489738 CCGTCCCACGATATAAGACGTTT 60.490 47.826 9.63 0.00 46.05 3.60
2393 3928 4.107622 CGTCCCACGATATAAGACGTTTT 58.892 43.478 0.00 0.00 46.05 2.43
2394 3929 4.563976 CGTCCCACGATATAAGACGTTTTT 59.436 41.667 0.00 0.00 46.05 1.94
2395 3930 5.499652 CGTCCCACGATATAAGACGTTTTTG 60.500 44.000 0.00 0.00 46.05 2.44
2396 3931 4.330620 TCCCACGATATAAGACGTTTTTGC 59.669 41.667 0.00 0.00 40.76 3.68
2397 3932 4.093703 CCCACGATATAAGACGTTTTTGCA 59.906 41.667 0.00 0.00 40.76 4.08
2398 3933 5.391097 CCCACGATATAAGACGTTTTTGCAA 60.391 40.000 0.00 0.00 40.76 4.08
2399 3934 5.732647 CCACGATATAAGACGTTTTTGCAAG 59.267 40.000 0.00 0.00 40.76 4.01
2400 3935 5.225129 CACGATATAAGACGTTTTTGCAAGC 59.775 40.000 0.00 0.00 40.76 4.01
2401 3936 5.121768 ACGATATAAGACGTTTTTGCAAGCT 59.878 36.000 0.00 0.00 39.75 3.74
2402 3937 6.311935 ACGATATAAGACGTTTTTGCAAGCTA 59.688 34.615 0.00 0.00 39.75 3.32
2403 3938 6.841286 CGATATAAGACGTTTTTGCAAGCTAG 59.159 38.462 0.00 0.00 0.00 3.42
2404 3939 5.941948 ATAAGACGTTTTTGCAAGCTAGT 57.058 34.783 0.00 0.00 0.00 2.57
2405 3940 8.712285 ATATAAGACGTTTTTGCAAGCTAGTA 57.288 30.769 0.00 0.00 0.00 1.82
2406 3941 5.941948 AAGACGTTTTTGCAAGCTAGTAT 57.058 34.783 0.00 0.00 0.00 2.12
2407 3942 5.941948 AGACGTTTTTGCAAGCTAGTATT 57.058 34.783 0.00 0.00 0.00 1.89
2408 3943 7.429636 AAGACGTTTTTGCAAGCTAGTATTA 57.570 32.000 0.00 0.00 0.00 0.98
2409 3944 7.611213 AGACGTTTTTGCAAGCTAGTATTAT 57.389 32.000 0.00 0.00 0.00 1.28
2410 3945 7.464358 AGACGTTTTTGCAAGCTAGTATTATG 58.536 34.615 0.00 0.00 0.00 1.90
2411 3946 6.551736 ACGTTTTTGCAAGCTAGTATTATGG 58.448 36.000 0.00 0.00 0.00 2.74
2412 3947 6.150474 ACGTTTTTGCAAGCTAGTATTATGGT 59.850 34.615 0.00 0.00 0.00 3.55
2413 3948 7.334921 ACGTTTTTGCAAGCTAGTATTATGGTA 59.665 33.333 0.00 0.00 0.00 3.25
2414 3949 7.850982 CGTTTTTGCAAGCTAGTATTATGGTAG 59.149 37.037 0.00 0.00 0.00 3.18
2415 3950 6.861065 TTTGCAAGCTAGTATTATGGTAGC 57.139 37.500 0.00 0.00 39.64 3.58
2421 3956 6.978674 AGCTAGTATTATGGTAGCTGTGAA 57.021 37.500 8.70 0.00 46.16 3.18
2422 3957 6.750148 AGCTAGTATTATGGTAGCTGTGAAC 58.250 40.000 8.70 0.00 46.16 3.18
2423 3958 6.551601 AGCTAGTATTATGGTAGCTGTGAACT 59.448 38.462 8.70 0.00 46.16 3.01
2424 3959 7.724506 AGCTAGTATTATGGTAGCTGTGAACTA 59.275 37.037 8.70 0.00 46.16 2.24
2425 3960 8.524487 GCTAGTATTATGGTAGCTGTGAACTAT 58.476 37.037 0.00 0.00 36.93 2.12
2428 3963 8.705594 AGTATTATGGTAGCTGTGAACTATTGT 58.294 33.333 0.00 0.00 0.00 2.71
2429 3964 9.976511 GTATTATGGTAGCTGTGAACTATTGTA 57.023 33.333 0.00 0.00 0.00 2.41
2431 3966 5.995565 TGGTAGCTGTGAACTATTGTAGT 57.004 39.130 0.00 0.00 41.73 2.73
2432 3967 7.655521 ATGGTAGCTGTGAACTATTGTAGTA 57.344 36.000 0.00 0.00 38.26 1.82
2433 3968 7.470935 TGGTAGCTGTGAACTATTGTAGTAA 57.529 36.000 0.00 0.00 38.26 2.24
2434 3969 7.318141 TGGTAGCTGTGAACTATTGTAGTAAC 58.682 38.462 0.00 0.00 38.26 2.50
2435 3970 7.039574 TGGTAGCTGTGAACTATTGTAGTAACA 60.040 37.037 0.00 5.82 38.26 2.41
2436 3971 7.275123 GGTAGCTGTGAACTATTGTAGTAACAC 59.725 40.741 0.00 14.55 41.78 3.32
2437 3972 6.755206 AGCTGTGAACTATTGTAGTAACACA 58.245 36.000 19.04 19.04 45.03 3.72
2438 3973 7.386851 AGCTGTGAACTATTGTAGTAACACAT 58.613 34.615 19.77 10.83 45.49 3.21
2439 3974 7.331934 AGCTGTGAACTATTGTAGTAACACATG 59.668 37.037 19.77 16.43 45.49 3.21
2440 3975 7.330946 GCTGTGAACTATTGTAGTAACACATGA 59.669 37.037 19.77 7.47 45.49 3.07
2441 3976 9.203421 CTGTGAACTATTGTAGTAACACATGAA 57.797 33.333 19.77 7.25 45.49 2.57
2442 3977 8.984764 TGTGAACTATTGTAGTAACACATGAAC 58.015 33.333 17.59 0.00 43.80 3.18
2443 3978 8.984764 GTGAACTATTGTAGTAACACATGAACA 58.015 33.333 0.00 0.00 41.43 3.18
2444 3979 8.984764 TGAACTATTGTAGTAACACATGAACAC 58.015 33.333 0.00 0.00 38.26 3.32
2445 3980 9.204570 GAACTATTGTAGTAACACATGAACACT 57.795 33.333 0.00 0.00 38.26 3.55
2446 3981 8.758633 ACTATTGTAGTAACACATGAACACTC 57.241 34.615 0.00 0.00 37.23 3.51
2447 3982 8.364894 ACTATTGTAGTAACACATGAACACTCA 58.635 33.333 0.00 0.00 37.23 3.41
2448 3983 7.658179 ATTGTAGTAACACATGAACACTCAG 57.342 36.000 0.00 0.00 34.61 3.35
2449 3984 6.156748 TGTAGTAACACATGAACACTCAGT 57.843 37.500 0.00 0.00 34.23 3.41
2450 3985 6.578944 TGTAGTAACACATGAACACTCAGTT 58.421 36.000 0.00 0.00 44.93 3.16
2451 3986 7.223971 TTGTAGTAACACATGAACACTCAGTTC 59.776 37.037 0.00 1.23 45.13 3.01
2463 3998 5.869753 ACACTCAGTTCAAAGTGCATATC 57.130 39.130 0.00 0.00 45.41 1.63
2464 3999 5.308014 ACACTCAGTTCAAAGTGCATATCA 58.692 37.500 0.00 0.00 45.41 2.15
2465 4000 5.942236 ACACTCAGTTCAAAGTGCATATCAT 59.058 36.000 0.00 0.00 45.41 2.45
2466 4001 7.105588 ACACTCAGTTCAAAGTGCATATCATA 58.894 34.615 0.00 0.00 45.41 2.15
2467 4002 7.607607 ACACTCAGTTCAAAGTGCATATCATAA 59.392 33.333 0.00 0.00 45.41 1.90
2468 4003 8.121086 CACTCAGTTCAAAGTGCATATCATAAG 58.879 37.037 0.00 0.00 36.76 1.73
2469 4004 8.043113 ACTCAGTTCAAAGTGCATATCATAAGA 58.957 33.333 0.00 0.00 0.00 2.10
2470 4005 8.201554 TCAGTTCAAAGTGCATATCATAAGAC 57.798 34.615 0.00 0.00 0.00 3.01
2471 4006 7.823799 TCAGTTCAAAGTGCATATCATAAGACA 59.176 33.333 0.00 0.00 0.00 3.41
2472 4007 7.907045 CAGTTCAAAGTGCATATCATAAGACAC 59.093 37.037 0.00 0.00 0.00 3.67
2473 4008 7.607607 AGTTCAAAGTGCATATCATAAGACACA 59.392 33.333 0.00 0.00 0.00 3.72
2474 4009 7.307493 TCAAAGTGCATATCATAAGACACAC 57.693 36.000 0.00 0.00 0.00 3.82
2475 4010 7.105588 TCAAAGTGCATATCATAAGACACACT 58.894 34.615 0.00 0.00 38.70 3.55
2476 4011 6.915544 AAGTGCATATCATAAGACACACTG 57.084 37.500 0.00 0.00 37.22 3.66
2477 4012 5.363101 AGTGCATATCATAAGACACACTGG 58.637 41.667 0.00 0.00 35.89 4.00
2478 4013 4.024556 GTGCATATCATAAGACACACTGGC 60.025 45.833 0.00 0.00 0.00 4.85
2479 4014 3.185188 GCATATCATAAGACACACTGGCG 59.815 47.826 0.00 0.00 0.00 5.69
2480 4015 2.315925 ATCATAAGACACACTGGCGG 57.684 50.000 0.00 0.00 0.00 6.13
2481 4016 1.262417 TCATAAGACACACTGGCGGA 58.738 50.000 0.00 0.00 0.00 5.54
2482 4017 1.204704 TCATAAGACACACTGGCGGAG 59.795 52.381 0.00 0.00 0.00 4.63
2500 4035 3.474570 CCTCGAGGAGGCCAAGGG 61.475 72.222 28.21 0.00 43.29 3.95
2501 4036 3.474570 CTCGAGGAGGCCAAGGGG 61.475 72.222 5.01 0.00 37.18 4.79
2518 4053 2.514395 GGGCGTAATCCCCCTTCC 59.486 66.667 0.00 0.00 40.51 3.46
2519 4054 2.380285 GGGCGTAATCCCCCTTCCA 61.380 63.158 0.00 0.00 40.51 3.53
2520 4055 1.610873 GGCGTAATCCCCCTTCCAA 59.389 57.895 0.00 0.00 0.00 3.53
2521 4056 0.033894 GGCGTAATCCCCCTTCCAAA 60.034 55.000 0.00 0.00 0.00 3.28
2522 4057 1.617533 GGCGTAATCCCCCTTCCAAAA 60.618 52.381 0.00 0.00 0.00 2.44
2523 4058 2.384828 GCGTAATCCCCCTTCCAAAAT 58.615 47.619 0.00 0.00 0.00 1.82
2524 4059 2.764010 GCGTAATCCCCCTTCCAAAATT 59.236 45.455 0.00 0.00 0.00 1.82
2525 4060 3.430236 GCGTAATCCCCCTTCCAAAATTG 60.430 47.826 0.00 0.00 0.00 2.32
2526 4061 3.430236 CGTAATCCCCCTTCCAAAATTGC 60.430 47.826 0.00 0.00 0.00 3.56
2527 4062 2.340721 ATCCCCCTTCCAAAATTGCA 57.659 45.000 0.00 0.00 0.00 4.08
2528 4063 2.340721 TCCCCCTTCCAAAATTGCAT 57.659 45.000 0.00 0.00 0.00 3.96
2529 4064 2.630232 TCCCCCTTCCAAAATTGCATT 58.370 42.857 0.00 0.00 0.00 3.56
2530 4065 2.571202 TCCCCCTTCCAAAATTGCATTC 59.429 45.455 0.00 0.00 0.00 2.67
2531 4066 2.573009 CCCCCTTCCAAAATTGCATTCT 59.427 45.455 0.00 0.00 0.00 2.40
2532 4067 3.009363 CCCCCTTCCAAAATTGCATTCTT 59.991 43.478 0.00 0.00 0.00 2.52
2533 4068 4.507157 CCCCCTTCCAAAATTGCATTCTTT 60.507 41.667 0.00 0.00 0.00 2.52
2534 4069 5.072055 CCCCTTCCAAAATTGCATTCTTTT 58.928 37.500 0.00 0.00 0.00 2.27
2535 4070 6.237154 CCCCTTCCAAAATTGCATTCTTTTA 58.763 36.000 0.00 0.00 0.00 1.52
2536 4071 6.149308 CCCCTTCCAAAATTGCATTCTTTTAC 59.851 38.462 0.00 0.00 0.00 2.01
2537 4072 6.936335 CCCTTCCAAAATTGCATTCTTTTACT 59.064 34.615 0.00 0.00 0.00 2.24
2538 4073 8.093927 CCCTTCCAAAATTGCATTCTTTTACTA 58.906 33.333 0.00 0.00 0.00 1.82
2539 4074 8.925700 CCTTCCAAAATTGCATTCTTTTACTAC 58.074 33.333 0.00 0.00 0.00 2.73
2540 4075 9.474920 CTTCCAAAATTGCATTCTTTTACTACA 57.525 29.630 0.00 0.00 0.00 2.74
2541 4076 9.995003 TTCCAAAATTGCATTCTTTTACTACAT 57.005 25.926 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
142 144 4.370364 AAAGCATATTGGCGTAGTTTGG 57.630 40.909 0.00 0.00 39.27 3.28
144 146 6.503589 TGTAAAAGCATATTGGCGTAGTTT 57.496 33.333 0.00 0.00 39.27 2.66
278 812 8.614469 AGGTTTGTGACATTTTCAAAAAGAAA 57.386 26.923 0.00 0.00 41.36 2.52
279 813 8.614469 AAGGTTTGTGACATTTTCAAAAAGAA 57.386 26.923 0.00 0.00 41.36 2.52
280 814 8.614469 AAAGGTTTGTGACATTTTCAAAAAGA 57.386 26.923 0.00 0.00 41.36 2.52
289 823 9.150348 CAGTTTAGAAAAAGGTTTGTGACATTT 57.850 29.630 0.00 0.00 43.50 2.32
291 825 8.062065 TCAGTTTAGAAAAAGGTTTGTGACAT 57.938 30.769 0.00 0.00 0.00 3.06
293 827 8.188139 TGATCAGTTTAGAAAAAGGTTTGTGAC 58.812 33.333 0.00 0.00 0.00 3.67
295 829 8.807581 GTTGATCAGTTTAGAAAAAGGTTTGTG 58.192 33.333 0.00 0.00 0.00 3.33
296 830 8.527810 TGTTGATCAGTTTAGAAAAAGGTTTGT 58.472 29.630 0.00 0.00 0.00 2.83
297 831 8.925161 TGTTGATCAGTTTAGAAAAAGGTTTG 57.075 30.769 0.00 0.00 0.00 2.93
357 891 9.959749 GTTCACACAACCTTTAGAAAATATGAA 57.040 29.630 0.00 0.00 0.00 2.57
372 907 8.865590 AGTGTAAAAATATTGTTCACACAACC 57.134 30.769 20.90 4.39 45.88 3.77
380 915 9.906660 TGTCCATGAAGTGTAAAAATATTGTTC 57.093 29.630 0.00 0.00 0.00 3.18
386 921 9.562408 TTACAGTGTCCATGAAGTGTAAAAATA 57.438 29.630 15.35 1.05 38.58 1.40
389 924 7.867305 TTTACAGTGTCCATGAAGTGTAAAA 57.133 32.000 21.37 12.44 43.81 1.52
392 927 7.172532 GTGAATTTACAGTGTCCATGAAGTGTA 59.827 37.037 0.00 0.57 32.34 2.90
403 938 4.688879 TGTCCATCGTGAATTTACAGTGTC 59.311 41.667 0.00 0.00 0.00 3.67
470 1007 7.902179 AGAAACGATCTTACATTATGGGGACAG 60.902 40.741 0.00 0.00 38.73 3.51
471 1008 6.126883 AGAAACGATCTTACATTATGGGGACA 60.127 38.462 0.00 0.00 39.56 4.02
473 1010 6.099125 TGAGAAACGATCTTACATTATGGGGA 59.901 38.462 0.00 0.00 38.96 4.81
474 1011 6.288294 TGAGAAACGATCTTACATTATGGGG 58.712 40.000 0.00 0.00 38.96 4.96
475 1012 7.519008 GCTTGAGAAACGATCTTACATTATGGG 60.519 40.741 0.00 0.00 38.96 4.00
476 1013 7.225538 AGCTTGAGAAACGATCTTACATTATGG 59.774 37.037 0.00 0.00 38.96 2.74
477 1014 8.136057 AGCTTGAGAAACGATCTTACATTATG 57.864 34.615 0.00 0.00 38.96 1.90
478 1015 9.469807 CTAGCTTGAGAAACGATCTTACATTAT 57.530 33.333 0.00 0.00 38.96 1.28
479 1016 8.467598 ACTAGCTTGAGAAACGATCTTACATTA 58.532 33.333 1.04 0.00 38.96 1.90
480 1017 7.324178 ACTAGCTTGAGAAACGATCTTACATT 58.676 34.615 1.04 0.00 38.96 2.71
481 1018 6.868622 ACTAGCTTGAGAAACGATCTTACAT 58.131 36.000 1.04 0.00 38.96 2.29
482 1019 6.268825 ACTAGCTTGAGAAACGATCTTACA 57.731 37.500 1.04 0.00 38.96 2.41
483 1020 8.347035 AGATACTAGCTTGAGAAACGATCTTAC 58.653 37.037 1.04 0.00 38.96 2.34
484 1021 8.453238 AGATACTAGCTTGAGAAACGATCTTA 57.547 34.615 1.04 0.00 38.96 2.10
485 1022 7.067615 TGAGATACTAGCTTGAGAAACGATCTT 59.932 37.037 1.04 0.00 38.96 2.40
486 1023 6.544197 TGAGATACTAGCTTGAGAAACGATCT 59.456 38.462 1.04 0.00 42.61 2.75
487 1024 6.730175 TGAGATACTAGCTTGAGAAACGATC 58.270 40.000 1.04 0.00 0.00 3.69
488 1025 6.701145 TGAGATACTAGCTTGAGAAACGAT 57.299 37.500 1.04 0.00 0.00 3.73
489 1026 6.510879 TTGAGATACTAGCTTGAGAAACGA 57.489 37.500 1.04 0.00 0.00 3.85
490 1027 7.763172 ATTTGAGATACTAGCTTGAGAAACG 57.237 36.000 1.04 0.00 0.00 3.60
618 1156 4.521062 ACGCTCGATCTGCCTGCC 62.521 66.667 0.00 0.00 0.00 4.85
619 1157 3.260483 CACGCTCGATCTGCCTGC 61.260 66.667 0.00 0.00 0.00 4.85
620 1158 2.341807 TAGCACGCTCGATCTGCCTG 62.342 60.000 0.00 2.28 0.00 4.85
621 1159 2.121538 TAGCACGCTCGATCTGCCT 61.122 57.895 0.00 0.00 0.00 4.75
785 1347 2.920912 GGGTGGCCGGGATCGATA 60.921 66.667 2.18 0.00 39.00 2.92
799 1361 0.838608 TAGTTGGTTGGTTGACGGGT 59.161 50.000 0.00 0.00 0.00 5.28
829 1394 1.869774 TCCAGACATGCATATGCGTC 58.130 50.000 19.61 20.68 45.83 5.19
833 1398 4.304110 GCCAAAATCCAGACATGCATATG 58.696 43.478 0.00 0.00 40.24 1.78
834 1399 3.322828 GGCCAAAATCCAGACATGCATAT 59.677 43.478 0.00 0.00 0.00 1.78
835 1400 2.694628 GGCCAAAATCCAGACATGCATA 59.305 45.455 0.00 0.00 0.00 3.14
836 1401 1.483415 GGCCAAAATCCAGACATGCAT 59.517 47.619 0.00 0.00 0.00 3.96
837 1402 0.896923 GGCCAAAATCCAGACATGCA 59.103 50.000 0.00 0.00 0.00 3.96
838 1403 0.896923 TGGCCAAAATCCAGACATGC 59.103 50.000 0.61 0.00 0.00 4.06
839 1404 1.894466 TGTGGCCAAAATCCAGACATG 59.106 47.619 7.24 0.00 33.63 3.21
840 1405 2.307496 TGTGGCCAAAATCCAGACAT 57.693 45.000 7.24 0.00 33.63 3.06
841 1406 1.962807 CTTGTGGCCAAAATCCAGACA 59.037 47.619 9.33 0.00 33.63 3.41
842 1407 1.337167 GCTTGTGGCCAAAATCCAGAC 60.337 52.381 9.33 0.00 33.63 3.51
843 1408 0.968405 GCTTGTGGCCAAAATCCAGA 59.032 50.000 9.33 0.00 33.63 3.86
844 1409 0.680618 TGCTTGTGGCCAAAATCCAG 59.319 50.000 9.33 0.00 40.92 3.86
845 1410 1.275856 GATGCTTGTGGCCAAAATCCA 59.724 47.619 9.33 10.09 40.92 3.41
846 1411 1.551883 AGATGCTTGTGGCCAAAATCC 59.448 47.619 9.33 4.13 40.92 3.01
847 1412 3.323751 AAGATGCTTGTGGCCAAAATC 57.676 42.857 9.33 5.55 40.92 2.17
848 1413 3.071312 TGAAAGATGCTTGTGGCCAAAAT 59.929 39.130 9.33 0.00 40.92 1.82
849 1414 2.433604 TGAAAGATGCTTGTGGCCAAAA 59.566 40.909 7.24 7.92 40.92 2.44
850 1415 2.036217 CTGAAAGATGCTTGTGGCCAAA 59.964 45.455 7.24 0.00 36.47 3.28
851 1416 1.614903 CTGAAAGATGCTTGTGGCCAA 59.385 47.619 7.24 0.00 36.47 4.52
852 1417 1.202915 TCTGAAAGATGCTTGTGGCCA 60.203 47.619 0.00 0.00 38.67 5.36
853 1418 1.538047 TCTGAAAGATGCTTGTGGCC 58.462 50.000 0.00 0.00 38.67 5.36
865 1430 1.202580 CCCGGCCTCTACATCTGAAAG 60.203 57.143 0.00 0.00 0.00 2.62
866 1431 0.830648 CCCGGCCTCTACATCTGAAA 59.169 55.000 0.00 0.00 0.00 2.69
867 1432 1.048724 CCCCGGCCTCTACATCTGAA 61.049 60.000 0.00 0.00 0.00 3.02
868 1433 1.457643 CCCCGGCCTCTACATCTGA 60.458 63.158 0.00 0.00 0.00 3.27
869 1434 1.762460 ACCCCGGCCTCTACATCTG 60.762 63.158 0.00 0.00 0.00 2.90
870 1435 1.762460 CACCCCGGCCTCTACATCT 60.762 63.158 0.00 0.00 0.00 2.90
871 1436 1.749334 CTCACCCCGGCCTCTACATC 61.749 65.000 0.00 0.00 0.00 3.06
872 1437 1.762460 CTCACCCCGGCCTCTACAT 60.762 63.158 0.00 0.00 0.00 2.29
873 1438 2.363795 CTCACCCCGGCCTCTACA 60.364 66.667 0.00 0.00 0.00 2.74
874 1439 3.851128 GCTCACCCCGGCCTCTAC 61.851 72.222 0.00 0.00 0.00 2.59
881 1446 2.821679 GAAAAGGAGGCTCACCCCGG 62.822 65.000 17.69 0.00 36.11 5.73
882 1447 1.377333 GAAAAGGAGGCTCACCCCG 60.377 63.158 17.69 0.00 36.11 5.73
883 1448 1.286248 TAGAAAAGGAGGCTCACCCC 58.714 55.000 17.69 0.00 36.11 4.95
884 1449 4.772886 TTATAGAAAAGGAGGCTCACCC 57.227 45.455 17.69 0.00 36.11 4.61
967 1537 1.992170 AACTGATTACTCGTGCGGTC 58.008 50.000 0.00 0.00 0.00 4.79
968 1538 3.248266 GTTAACTGATTACTCGTGCGGT 58.752 45.455 0.00 0.00 0.00 5.68
969 1539 2.278094 CGTTAACTGATTACTCGTGCGG 59.722 50.000 3.71 0.00 0.00 5.69
970 1540 3.165890 TCGTTAACTGATTACTCGTGCG 58.834 45.455 3.71 0.00 0.00 5.34
971 1541 4.206609 GGATCGTTAACTGATTACTCGTGC 59.793 45.833 3.71 0.00 0.00 5.34
972 1542 5.337554 TGGATCGTTAACTGATTACTCGTG 58.662 41.667 3.71 0.00 0.00 4.35
973 1543 5.571784 TGGATCGTTAACTGATTACTCGT 57.428 39.130 3.71 0.00 0.00 4.18
974 1544 5.051641 GCTTGGATCGTTAACTGATTACTCG 60.052 44.000 3.71 0.00 0.00 4.18
975 1545 5.234543 GGCTTGGATCGTTAACTGATTACTC 59.765 44.000 3.71 0.00 0.00 2.59
980 1550 3.627395 TGGCTTGGATCGTTAACTGAT 57.373 42.857 11.14 11.14 0.00 2.90
1014 1587 3.062466 ATGTGCTGCTGCTGCTGG 61.062 61.111 27.67 12.95 40.48 4.85
1258 1831 2.941333 CAGGTTGAGCACGTGCAG 59.059 61.111 39.21 17.05 45.16 4.41
1561 2134 8.732746 ACAAGACTAATGTAATAACCACCATC 57.267 34.615 0.00 0.00 0.00 3.51
1612 2185 9.708222 CGAATCTCCTAACAAAGTAATGAAATG 57.292 33.333 0.00 0.00 0.00 2.32
1628 2201 3.819337 CCTCCAATCGTACGAATCTCCTA 59.181 47.826 23.56 3.65 0.00 2.94
1630 2203 2.621998 TCCTCCAATCGTACGAATCTCC 59.378 50.000 23.56 0.00 0.00 3.71
1631 2204 3.564644 TCTCCTCCAATCGTACGAATCTC 59.435 47.826 23.56 0.00 0.00 2.75
1632 2205 3.552875 TCTCCTCCAATCGTACGAATCT 58.447 45.455 23.56 7.06 0.00 2.40
1633 2206 3.984508 TCTCCTCCAATCGTACGAATC 57.015 47.619 23.56 0.00 0.00 2.52
1634 2207 3.488721 CGTTCTCCTCCAATCGTACGAAT 60.489 47.826 23.56 11.74 0.00 3.34
1635 2208 2.159476 CGTTCTCCTCCAATCGTACGAA 60.159 50.000 23.56 4.45 0.00 3.85
1637 2210 1.533338 CCGTTCTCCTCCAATCGTACG 60.533 57.143 9.53 9.53 0.00 3.67
1638 2211 1.747355 TCCGTTCTCCTCCAATCGTAC 59.253 52.381 0.00 0.00 0.00 3.67
1640 2213 1.486211 ATCCGTTCTCCTCCAATCGT 58.514 50.000 0.00 0.00 0.00 3.73
1641 2214 2.604046 AATCCGTTCTCCTCCAATCG 57.396 50.000 0.00 0.00 0.00 3.34
1642 2215 5.024785 AGTAAATCCGTTCTCCTCCAATC 57.975 43.478 0.00 0.00 0.00 2.67
1643 2216 6.555463 TTAGTAAATCCGTTCTCCTCCAAT 57.445 37.500 0.00 0.00 0.00 3.16
1644 2217 6.555463 ATTAGTAAATCCGTTCTCCTCCAA 57.445 37.500 0.00 0.00 0.00 3.53
1645 2218 6.155565 TGAATTAGTAAATCCGTTCTCCTCCA 59.844 38.462 0.00 0.00 0.00 3.86
1646 2219 6.479331 GTGAATTAGTAAATCCGTTCTCCTCC 59.521 42.308 0.00 0.00 0.00 4.30
1647 2220 7.039882 TGTGAATTAGTAAATCCGTTCTCCTC 58.960 38.462 0.00 0.00 0.00 3.71
1648 2221 6.942976 TGTGAATTAGTAAATCCGTTCTCCT 58.057 36.000 0.00 0.00 0.00 3.69
1649 2222 7.605410 TTGTGAATTAGTAAATCCGTTCTCC 57.395 36.000 0.00 0.00 0.00 3.71
1665 2238 7.576236 CGTTGACTGAGACTTAATTGTGAATT 58.424 34.615 0.00 0.00 34.90 2.17
1669 2242 4.449068 AGCGTTGACTGAGACTTAATTGTG 59.551 41.667 0.00 0.00 0.00 3.33
1678 2251 4.106029 TGGTTATAGCGTTGACTGAGAC 57.894 45.455 0.00 0.00 0.00 3.36
1838 2416 1.069513 TCGACAAGGGATCGTTGTGTT 59.930 47.619 14.88 0.00 41.51 3.32
1872 3398 1.952133 GTCGGCGTGTGTGCAACTA 60.952 57.895 6.85 0.00 38.04 2.24
1883 3409 2.593148 TTGTTGCATGGTCGGCGT 60.593 55.556 6.85 0.00 0.00 5.68
1921 3447 1.059098 AGAGATGGTTGTGTGGCTGA 58.941 50.000 0.00 0.00 0.00 4.26
1922 3448 1.901591 AAGAGATGGTTGTGTGGCTG 58.098 50.000 0.00 0.00 0.00 4.85
1923 3449 3.679917 CGATAAGAGATGGTTGTGTGGCT 60.680 47.826 0.00 0.00 0.00 4.75
1924 3450 2.609459 CGATAAGAGATGGTTGTGTGGC 59.391 50.000 0.00 0.00 0.00 5.01
1925 3451 4.123497 TCGATAAGAGATGGTTGTGTGG 57.877 45.455 0.00 0.00 0.00 4.17
1926 3452 4.442403 CGATCGATAAGAGATGGTTGTGTG 59.558 45.833 10.26 0.00 0.00 3.82
1927 3453 4.611943 CGATCGATAAGAGATGGTTGTGT 58.388 43.478 10.26 0.00 0.00 3.72
1928 3454 3.426859 GCGATCGATAAGAGATGGTTGTG 59.573 47.826 21.57 0.00 0.00 3.33
1929 3455 3.068165 TGCGATCGATAAGAGATGGTTGT 59.932 43.478 21.57 0.00 0.00 3.32
1930 3456 3.642705 TGCGATCGATAAGAGATGGTTG 58.357 45.455 21.57 0.00 0.00 3.77
1931 3457 4.240888 CATGCGATCGATAAGAGATGGTT 58.759 43.478 21.57 0.00 0.00 3.67
1932 3458 3.842820 CATGCGATCGATAAGAGATGGT 58.157 45.455 21.57 0.00 0.00 3.55
1933 3459 2.602211 GCATGCGATCGATAAGAGATGG 59.398 50.000 21.57 0.00 0.00 3.51
1934 3460 3.060496 GTGCATGCGATCGATAAGAGATG 59.940 47.826 21.57 8.99 0.00 2.90
1935 3461 3.056962 AGTGCATGCGATCGATAAGAGAT 60.057 43.478 21.57 0.00 0.00 2.75
1936 3462 2.294512 AGTGCATGCGATCGATAAGAGA 59.705 45.455 21.57 0.00 0.00 3.10
1937 3463 2.670479 AGTGCATGCGATCGATAAGAG 58.330 47.619 21.57 2.70 0.00 2.85
1938 3464 2.800881 AGTGCATGCGATCGATAAGA 57.199 45.000 21.57 0.00 0.00 2.10
1939 3465 4.445718 ACTTTAGTGCATGCGATCGATAAG 59.554 41.667 21.57 11.66 0.00 1.73
1940 3466 4.368315 ACTTTAGTGCATGCGATCGATAA 58.632 39.130 21.57 3.37 0.00 1.75
1941 3467 3.977427 ACTTTAGTGCATGCGATCGATA 58.023 40.909 21.57 7.18 0.00 2.92
1942 3468 2.826428 ACTTTAGTGCATGCGATCGAT 58.174 42.857 21.57 0.00 0.00 3.59
1943 3469 2.293677 ACTTTAGTGCATGCGATCGA 57.706 45.000 21.57 4.34 0.00 3.59
1944 3470 2.697363 CAACTTTAGTGCATGCGATCG 58.303 47.619 14.09 11.69 0.00 3.69
1945 3471 2.159531 TGCAACTTTAGTGCATGCGATC 60.160 45.455 14.09 6.22 39.81 3.69
1946 3472 1.811965 TGCAACTTTAGTGCATGCGAT 59.188 42.857 14.09 6.44 39.81 4.58
1947 3473 1.069296 GTGCAACTTTAGTGCATGCGA 60.069 47.619 14.09 0.00 40.84 5.10
1948 3474 1.330306 GTGCAACTTTAGTGCATGCG 58.670 50.000 14.09 0.00 40.84 4.73
1949 3475 2.053627 GTGTGCAACTTTAGTGCATGC 58.946 47.619 11.82 11.82 40.84 4.06
1950 3476 2.309693 CGTGTGCAACTTTAGTGCATG 58.690 47.619 2.01 0.00 40.84 4.06
1951 3477 1.334960 GCGTGTGCAACTTTAGTGCAT 60.335 47.619 2.01 0.00 40.84 3.96
1952 3478 0.028770 GCGTGTGCAACTTTAGTGCA 59.971 50.000 0.00 0.00 42.15 4.57
1953 3479 0.991770 CGCGTGTGCAACTTTAGTGC 60.992 55.000 0.00 0.00 42.97 4.40
1954 3480 0.303493 ACGCGTGTGCAACTTTAGTG 59.697 50.000 12.93 0.00 42.97 2.74
1955 3481 0.580104 GACGCGTGTGCAACTTTAGT 59.420 50.000 20.70 0.00 42.97 2.24
1956 3482 0.448861 CGACGCGTGTGCAACTTTAG 60.449 55.000 20.70 0.00 42.97 1.85
1957 3483 1.560770 CGACGCGTGTGCAACTTTA 59.439 52.632 20.70 0.00 42.97 1.85
1958 3484 2.323105 CGACGCGTGTGCAACTTT 59.677 55.556 20.70 0.00 42.97 2.66
1959 3485 3.636043 CCGACGCGTGTGCAACTT 61.636 61.111 20.70 0.00 42.97 2.66
1970 3496 4.036804 TTGTTGCATGGCCGACGC 62.037 61.111 0.00 0.10 0.00 5.19
1971 3497 2.126888 GTTGTTGCATGGCCGACG 60.127 61.111 0.00 0.00 0.00 5.12
1972 3498 1.081242 CTGTTGTTGCATGGCCGAC 60.081 57.895 0.00 0.00 0.00 4.79
1973 3499 1.106351 AACTGTTGTTGCATGGCCGA 61.106 50.000 0.00 0.00 34.71 5.54
1974 3500 0.940519 CAACTGTTGTTGCATGGCCG 60.941 55.000 12.30 0.00 45.57 6.13
1975 3501 2.903284 CAACTGTTGTTGCATGGCC 58.097 52.632 12.30 0.00 45.57 5.36
1982 3508 7.732204 TCATAGAGGATGTGCAACTGTTGTTG 61.732 42.308 20.57 7.19 44.34 3.33
1983 3509 2.936202 AGAGGATGTGCAACTGTTGTT 58.064 42.857 20.57 5.01 38.04 2.83
1984 3510 2.645838 AGAGGATGTGCAACTGTTGT 57.354 45.000 20.57 1.79 38.04 3.32
1985 3511 4.256110 TCATAGAGGATGTGCAACTGTTG 58.744 43.478 15.98 15.98 38.04 3.33
1986 3512 4.511527 CTCATAGAGGATGTGCAACTGTT 58.488 43.478 0.00 0.00 38.04 3.16
1987 3513 4.134379 CTCATAGAGGATGTGCAACTGT 57.866 45.455 0.00 0.00 38.04 3.55
1993 3519 0.033228 AGCGCTCATAGAGGATGTGC 59.967 55.000 2.64 2.33 46.85 4.57
1994 3520 1.780806 CAGCGCTCATAGAGGATGTG 58.219 55.000 7.13 0.00 36.84 3.21
1995 3521 0.033228 GCAGCGCTCATAGAGGATGT 59.967 55.000 7.13 0.00 36.84 3.06
1996 3522 0.317799 AGCAGCGCTCATAGAGGATG 59.682 55.000 7.13 0.00 30.62 3.51
1997 3523 1.543802 GTAGCAGCGCTCATAGAGGAT 59.456 52.381 7.13 0.00 40.44 3.24
1998 3524 0.955178 GTAGCAGCGCTCATAGAGGA 59.045 55.000 7.13 0.00 40.44 3.71
1999 3525 0.386605 CGTAGCAGCGCTCATAGAGG 60.387 60.000 7.13 0.00 40.44 3.69
2000 3526 3.084686 CGTAGCAGCGCTCATAGAG 57.915 57.895 7.13 0.00 40.44 2.43
2014 3540 3.589982 GCATCGTCGTCTGCGTAG 58.410 61.111 0.00 0.00 39.49 3.51
2019 3545 4.829518 TCCGCGCATCGTCGTCTG 62.830 66.667 8.75 0.00 36.19 3.51
2020 3546 4.831307 GTCCGCGCATCGTCGTCT 62.831 66.667 8.75 0.00 36.19 4.18
2024 3550 2.514013 AAATCGTCCGCGCATCGTC 61.514 57.895 8.75 0.00 38.14 4.20
2025 3551 2.508439 AAATCGTCCGCGCATCGT 60.508 55.556 8.75 0.00 38.14 3.73
2026 3552 2.053984 CAAATCGTCCGCGCATCG 60.054 61.111 8.75 8.94 38.14 3.84
2027 3553 2.351210 GCAAATCGTCCGCGCATC 60.351 61.111 8.75 0.00 38.14 3.91
2028 3554 4.222589 CGCAAATCGTCCGCGCAT 62.223 61.111 8.75 0.00 42.79 4.73
2033 3559 3.474904 TCGTGCGCAAATCGTCCG 61.475 61.111 14.00 10.25 41.07 4.79
2034 3560 2.095843 GTCGTGCGCAAATCGTCC 59.904 61.111 14.00 3.62 41.07 4.79
2035 3561 2.275202 CGTCGTGCGCAAATCGTC 60.275 61.111 14.00 8.98 41.07 4.20
2045 3571 3.358667 CTGATGTGCAGCGTCGTGC 62.359 63.158 11.34 11.34 44.27 5.34
2046 3572 2.733671 CCTGATGTGCAGCGTCGTG 61.734 63.158 0.00 0.00 43.50 4.35
2047 3573 2.433145 CCTGATGTGCAGCGTCGT 60.433 61.111 0.00 0.00 43.50 4.34
2048 3574 2.433145 ACCTGATGTGCAGCGTCG 60.433 61.111 0.00 0.00 43.50 5.12
2049 3575 2.447887 CGACCTGATGTGCAGCGTC 61.448 63.158 0.00 0.00 43.50 5.19
2050 3576 2.433145 CGACCTGATGTGCAGCGT 60.433 61.111 0.00 0.00 43.50 5.07
2051 3577 2.433145 ACGACCTGATGTGCAGCG 60.433 61.111 0.00 0.00 43.50 5.18
2052 3578 2.103042 GGACGACCTGATGTGCAGC 61.103 63.158 0.00 0.00 43.50 5.25
2053 3579 0.107993 ATGGACGACCTGATGTGCAG 60.108 55.000 5.33 0.00 39.82 4.41
2054 3580 0.391528 CATGGACGACCTGATGTGCA 60.392 55.000 5.33 0.00 40.75 4.57
2055 3581 0.391661 ACATGGACGACCTGATGTGC 60.392 55.000 8.65 0.00 33.45 4.57
2056 3582 2.959507 TACATGGACGACCTGATGTG 57.040 50.000 16.41 6.32 34.88 3.21
2057 3583 4.832823 TGATATACATGGACGACCTGATGT 59.167 41.667 12.91 12.91 36.91 3.06
2058 3584 5.391312 TGATATACATGGACGACCTGATG 57.609 43.478 5.33 4.18 37.04 3.07
2059 3585 5.163612 CGATGATATACATGGACGACCTGAT 60.164 44.000 5.33 0.00 39.56 2.90
2060 3586 4.156008 CGATGATATACATGGACGACCTGA 59.844 45.833 5.33 0.00 39.56 3.86
2061 3587 4.156008 TCGATGATATACATGGACGACCTG 59.844 45.833 5.33 3.87 38.46 4.00
2062 3588 4.332828 TCGATGATATACATGGACGACCT 58.667 43.478 5.33 0.00 38.46 3.85
2063 3589 4.696899 TCGATGATATACATGGACGACC 57.303 45.455 0.00 0.00 38.46 4.79
2064 3590 5.700846 ACTTCGATGATATACATGGACGAC 58.299 41.667 5.16 0.00 41.90 4.34
2065 3591 5.106277 GGACTTCGATGATATACATGGACGA 60.106 44.000 5.16 0.00 41.90 4.20
2066 3592 5.096169 GGACTTCGATGATATACATGGACG 58.904 45.833 5.16 0.00 41.90 4.79
2067 3593 6.025749 TGGACTTCGATGATATACATGGAC 57.974 41.667 5.16 0.00 41.90 4.02
2068 3594 5.775195 ACTGGACTTCGATGATATACATGGA 59.225 40.000 5.16 0.00 40.84 3.41
2069 3595 5.866092 CACTGGACTTCGATGATATACATGG 59.134 44.000 5.16 0.00 39.56 3.66
2070 3596 5.866092 CCACTGGACTTCGATGATATACATG 59.134 44.000 5.16 0.00 39.56 3.21
2071 3597 5.775195 TCCACTGGACTTCGATGATATACAT 59.225 40.000 5.16 0.00 42.47 2.29
2072 3598 5.137551 TCCACTGGACTTCGATGATATACA 58.862 41.667 5.16 0.00 0.00 2.29
2073 3599 5.707242 TCCACTGGACTTCGATGATATAC 57.293 43.478 5.16 0.00 0.00 1.47
2087 3613 0.902984 ACATACAGCCGTCCACTGGA 60.903 55.000 0.00 0.00 39.55 3.86
2088 3614 0.740868 CACATACAGCCGTCCACTGG 60.741 60.000 0.00 0.00 39.55 4.00
2089 3615 0.740868 CCACATACAGCCGTCCACTG 60.741 60.000 0.00 0.00 41.08 3.66
2090 3616 1.596934 CCACATACAGCCGTCCACT 59.403 57.895 0.00 0.00 0.00 4.00
2091 3617 2.106683 GCCACATACAGCCGTCCAC 61.107 63.158 0.00 0.00 0.00 4.02
2092 3618 1.909459 ATGCCACATACAGCCGTCCA 61.909 55.000 0.00 0.00 0.00 4.02
2093 3619 1.153168 ATGCCACATACAGCCGTCC 60.153 57.895 0.00 0.00 0.00 4.79
2094 3620 1.490693 CGATGCCACATACAGCCGTC 61.491 60.000 0.00 0.00 0.00 4.79
2095 3621 1.521457 CGATGCCACATACAGCCGT 60.521 57.895 0.00 0.00 0.00 5.68
2096 3622 1.490693 GACGATGCCACATACAGCCG 61.491 60.000 0.00 0.00 0.00 5.52
2097 3623 1.160329 GGACGATGCCACATACAGCC 61.160 60.000 0.00 0.00 0.00 4.85
2098 3624 0.461870 TGGACGATGCCACATACAGC 60.462 55.000 0.00 0.00 31.66 4.40
2099 3625 1.665679 GTTGGACGATGCCACATACAG 59.334 52.381 0.00 0.00 37.75 2.74
2100 3626 1.277842 AGTTGGACGATGCCACATACA 59.722 47.619 0.00 0.00 37.75 2.29
2101 3627 1.665679 CAGTTGGACGATGCCACATAC 59.334 52.381 0.00 0.00 37.75 2.39
2102 3628 1.277842 ACAGTTGGACGATGCCACATA 59.722 47.619 0.00 0.00 37.75 2.29
2103 3629 0.036732 ACAGTTGGACGATGCCACAT 59.963 50.000 0.00 0.00 37.75 3.21
2104 3630 0.602638 GACAGTTGGACGATGCCACA 60.603 55.000 0.00 0.00 37.75 4.17
2105 3631 1.626654 CGACAGTTGGACGATGCCAC 61.627 60.000 0.00 0.00 37.75 5.01
2106 3632 1.374125 CGACAGTTGGACGATGCCA 60.374 57.895 0.00 0.00 35.78 4.92
2107 3633 1.374252 ACGACAGTTGGACGATGCC 60.374 57.895 0.00 0.00 0.00 4.40
2108 3634 1.781555 CACGACAGTTGGACGATGC 59.218 57.895 0.00 0.00 0.00 3.91
2109 3635 1.781555 GCACGACAGTTGGACGATG 59.218 57.895 0.00 0.00 0.00 3.84
2110 3636 1.733041 CGCACGACAGTTGGACGAT 60.733 57.895 0.00 0.00 0.00 3.73
2111 3637 2.137425 ATCGCACGACAGTTGGACGA 62.137 55.000 9.21 9.21 0.00 4.20
2112 3638 1.674611 GATCGCACGACAGTTGGACG 61.675 60.000 0.00 0.00 0.00 4.79
2113 3639 1.674611 CGATCGCACGACAGTTGGAC 61.675 60.000 0.26 0.00 35.09 4.02
2114 3640 1.443702 CGATCGCACGACAGTTGGA 60.444 57.895 0.26 0.00 35.09 3.53
2115 3641 0.802222 ATCGATCGCACGACAGTTGG 60.802 55.000 11.09 0.00 44.84 3.77
2116 3642 0.567968 GATCGATCGCACGACAGTTG 59.432 55.000 11.09 0.00 44.84 3.16
2117 3643 0.452184 AGATCGATCGCACGACAGTT 59.548 50.000 19.33 0.00 44.84 3.16
2118 3644 1.296727 TAGATCGATCGCACGACAGT 58.703 50.000 19.33 1.67 44.84 3.55
2119 3645 2.500888 GATAGATCGATCGCACGACAG 58.499 52.381 19.33 0.00 44.84 3.51
2120 3646 2.596263 GATAGATCGATCGCACGACA 57.404 50.000 19.33 0.00 44.84 4.35
2132 3658 6.129326 CGAAAATGCTGTACAGACGATAGATC 60.129 42.308 27.08 11.48 41.38 2.75
2133 3659 5.687730 CGAAAATGCTGTACAGACGATAGAT 59.312 40.000 27.08 3.97 41.38 1.98
2134 3660 5.034797 CGAAAATGCTGTACAGACGATAGA 58.965 41.667 27.08 2.35 41.38 1.98
2135 3661 5.034797 TCGAAAATGCTGTACAGACGATAG 58.965 41.667 27.08 10.94 46.19 2.08
2136 3662 4.989044 TCGAAAATGCTGTACAGACGATA 58.011 39.130 27.08 6.84 0.00 2.92
2137 3663 3.845178 TCGAAAATGCTGTACAGACGAT 58.155 40.909 27.08 11.37 0.00 3.73
2138 3664 3.291809 TCGAAAATGCTGTACAGACGA 57.708 42.857 27.08 19.86 0.00 4.20
2139 3665 3.000322 GGATCGAAAATGCTGTACAGACG 60.000 47.826 27.08 18.20 0.00 4.18
2140 3666 4.184629 AGGATCGAAAATGCTGTACAGAC 58.815 43.478 27.08 17.20 0.00 3.51
2141 3667 4.160439 AGAGGATCGAAAATGCTGTACAGA 59.840 41.667 27.08 11.86 42.67 3.41
2142 3668 4.437239 AGAGGATCGAAAATGCTGTACAG 58.563 43.478 18.93 18.93 42.67 2.74
2143 3669 4.471904 AGAGGATCGAAAATGCTGTACA 57.528 40.909 0.00 0.00 42.67 2.90
2144 3670 6.701841 TCAATAGAGGATCGAAAATGCTGTAC 59.298 38.462 0.00 0.00 42.67 2.90
2145 3671 6.701841 GTCAATAGAGGATCGAAAATGCTGTA 59.298 38.462 0.00 0.00 42.67 2.74
2146 3672 5.525378 GTCAATAGAGGATCGAAAATGCTGT 59.475 40.000 0.00 0.00 42.67 4.40
2147 3673 5.049818 GGTCAATAGAGGATCGAAAATGCTG 60.050 44.000 0.00 0.00 42.67 4.41
2148 3674 5.059833 GGTCAATAGAGGATCGAAAATGCT 58.940 41.667 0.00 0.00 42.67 3.79
2149 3675 4.816385 TGGTCAATAGAGGATCGAAAATGC 59.184 41.667 0.00 0.00 42.67 3.56
2150 3676 6.567321 GCATGGTCAATAGAGGATCGAAAATG 60.567 42.308 0.00 0.00 42.67 2.32
2151 3677 5.471456 GCATGGTCAATAGAGGATCGAAAAT 59.529 40.000 0.00 0.00 42.67 1.82
2152 3678 4.816385 GCATGGTCAATAGAGGATCGAAAA 59.184 41.667 0.00 0.00 42.67 2.29
2153 3679 4.141733 TGCATGGTCAATAGAGGATCGAAA 60.142 41.667 0.00 0.00 42.67 3.46
2154 3680 3.387699 TGCATGGTCAATAGAGGATCGAA 59.612 43.478 0.00 0.00 42.67 3.71
2155 3681 2.965147 TGCATGGTCAATAGAGGATCGA 59.035 45.455 0.00 0.00 42.67 3.59
2156 3682 3.391506 TGCATGGTCAATAGAGGATCG 57.608 47.619 0.00 0.00 42.67 3.69
2157 3683 4.514441 CAGTTGCATGGTCAATAGAGGATC 59.486 45.833 0.00 0.00 0.00 3.36
2158 3684 4.458397 CAGTTGCATGGTCAATAGAGGAT 58.542 43.478 0.00 0.00 0.00 3.24
2159 3685 3.877559 CAGTTGCATGGTCAATAGAGGA 58.122 45.455 0.00 0.00 0.00 3.71
2160 3686 2.357009 GCAGTTGCATGGTCAATAGAGG 59.643 50.000 0.00 0.00 41.59 3.69
2161 3687 3.687572 GCAGTTGCATGGTCAATAGAG 57.312 47.619 0.00 0.00 41.59 2.43
2264 3791 5.105917 CCAACATAGGACGTTTTGCCTATTT 60.106 40.000 10.11 3.03 43.24 1.40
2267 3794 3.244630 ACCAACATAGGACGTTTTGCCTA 60.245 43.478 3.44 3.44 40.78 3.93
2291 3826 9.057089 AGTTTAACTAAATCTCACTTCAGTTGG 57.943 33.333 0.00 0.00 0.00 3.77
2327 3862 9.474920 TTCCAATATTGAAACAAAGTTGATGTC 57.525 29.630 17.23 0.00 0.00 3.06
2348 3883 0.035739 GGAGTACTGCCGGTTTCCAA 59.964 55.000 0.00 0.00 33.45 3.53
2349 3884 1.675219 GGAGTACTGCCGGTTTCCA 59.325 57.895 0.00 0.00 33.45 3.53
2350 3885 1.078637 GGGAGTACTGCCGGTTTCC 60.079 63.158 18.47 1.08 32.87 3.13
2351 3886 0.108281 GAGGGAGTACTGCCGGTTTC 60.108 60.000 25.75 15.08 46.59 2.78
2352 3887 1.551019 GGAGGGAGTACTGCCGGTTT 61.551 60.000 25.75 10.14 46.59 3.27
2353 3888 1.988406 GGAGGGAGTACTGCCGGTT 60.988 63.158 25.75 10.52 46.59 4.44
2354 3889 2.363925 GGAGGGAGTACTGCCGGT 60.364 66.667 25.75 11.28 46.59 5.28
2355 3890 3.528370 CGGAGGGAGTACTGCCGG 61.528 72.222 25.75 16.03 46.59 6.13
2356 3891 2.754658 ACGGAGGGAGTACTGCCG 60.755 66.667 25.75 20.67 46.59 5.69
2357 3892 2.424733 GGACGGAGGGAGTACTGCC 61.425 68.421 24.99 24.99 41.91 4.85
2358 3893 2.424733 GGGACGGAGGGAGTACTGC 61.425 68.421 5.70 5.70 0.00 4.40
2359 3894 1.000019 TGGGACGGAGGGAGTACTG 60.000 63.158 0.00 0.00 0.00 2.74
2360 3895 1.000107 GTGGGACGGAGGGAGTACT 60.000 63.158 0.00 0.00 0.00 2.73
2361 3896 2.413142 CGTGGGACGGAGGGAGTAC 61.413 68.421 0.00 0.00 38.08 2.73
2362 3897 1.929860 ATCGTGGGACGGAGGGAGTA 61.930 60.000 0.00 0.00 42.81 2.59
2363 3898 1.929860 TATCGTGGGACGGAGGGAGT 61.930 60.000 0.00 0.00 42.81 3.85
2364 3899 0.539901 ATATCGTGGGACGGAGGGAG 60.540 60.000 0.00 0.00 42.81 4.30
2365 3900 0.773014 TATATCGTGGGACGGAGGGA 59.227 55.000 0.00 0.00 42.81 4.20
2366 3901 1.544691 CTTATATCGTGGGACGGAGGG 59.455 57.143 0.00 0.00 42.81 4.30
2367 3902 2.228343 GTCTTATATCGTGGGACGGAGG 59.772 54.545 0.00 0.00 42.81 4.30
2368 3903 2.095869 CGTCTTATATCGTGGGACGGAG 60.096 54.545 0.00 0.00 43.69 4.63
2369 3904 1.875514 CGTCTTATATCGTGGGACGGA 59.124 52.381 0.00 0.00 43.69 4.69
2370 3905 2.327081 CGTCTTATATCGTGGGACGG 57.673 55.000 0.00 0.00 43.69 4.79
2372 3907 5.725864 GCAAAAACGTCTTATATCGTGGGAC 60.726 44.000 0.00 0.00 40.19 4.46
2373 3908 4.330620 GCAAAAACGTCTTATATCGTGGGA 59.669 41.667 0.00 0.00 40.19 4.37
2374 3909 4.093703 TGCAAAAACGTCTTATATCGTGGG 59.906 41.667 0.00 0.00 40.19 4.61
2375 3910 5.211266 TGCAAAAACGTCTTATATCGTGG 57.789 39.130 0.00 0.00 40.19 4.94
2376 3911 5.225129 GCTTGCAAAAACGTCTTATATCGTG 59.775 40.000 0.00 0.00 40.19 4.35
2377 3912 5.121768 AGCTTGCAAAAACGTCTTATATCGT 59.878 36.000 0.00 0.00 42.12 3.73
2378 3913 5.560148 AGCTTGCAAAAACGTCTTATATCG 58.440 37.500 0.00 0.00 0.00 2.92
2379 3914 7.685594 ACTAGCTTGCAAAAACGTCTTATATC 58.314 34.615 0.00 0.00 0.00 1.63
2380 3915 7.611213 ACTAGCTTGCAAAAACGTCTTATAT 57.389 32.000 0.00 0.00 0.00 0.86
2381 3916 8.712285 ATACTAGCTTGCAAAAACGTCTTATA 57.288 30.769 0.00 0.00 0.00 0.98
2382 3917 5.941948 ACTAGCTTGCAAAAACGTCTTAT 57.058 34.783 0.00 0.00 0.00 1.73
2383 3918 7.429636 AATACTAGCTTGCAAAAACGTCTTA 57.570 32.000 0.00 0.00 0.00 2.10
2384 3919 5.941948 ATACTAGCTTGCAAAAACGTCTT 57.058 34.783 0.00 0.00 0.00 3.01
2385 3920 5.941948 AATACTAGCTTGCAAAAACGTCT 57.058 34.783 0.00 0.00 0.00 4.18
2386 3921 6.687105 CCATAATACTAGCTTGCAAAAACGTC 59.313 38.462 0.00 0.00 0.00 4.34
2387 3922 6.150474 ACCATAATACTAGCTTGCAAAAACGT 59.850 34.615 0.00 0.00 0.00 3.99
2388 3923 6.551736 ACCATAATACTAGCTTGCAAAAACG 58.448 36.000 0.00 0.00 0.00 3.60
2389 3924 7.644157 GCTACCATAATACTAGCTTGCAAAAAC 59.356 37.037 0.00 0.00 31.82 2.43
2390 3925 7.556275 AGCTACCATAATACTAGCTTGCAAAAA 59.444 33.333 0.00 0.00 40.26 1.94
2391 3926 7.012327 CAGCTACCATAATACTAGCTTGCAAAA 59.988 37.037 0.00 0.00 41.05 2.44
2392 3927 6.483307 CAGCTACCATAATACTAGCTTGCAAA 59.517 38.462 0.00 0.00 41.05 3.68
2393 3928 5.991606 CAGCTACCATAATACTAGCTTGCAA 59.008 40.000 0.00 0.00 41.05 4.08
2394 3929 5.070446 ACAGCTACCATAATACTAGCTTGCA 59.930 40.000 0.00 0.00 41.05 4.08
2395 3930 5.406780 CACAGCTACCATAATACTAGCTTGC 59.593 44.000 0.00 0.00 41.05 4.01
2396 3931 6.749139 TCACAGCTACCATAATACTAGCTTG 58.251 40.000 0.00 0.00 41.05 4.01
2397 3932 6.978674 TCACAGCTACCATAATACTAGCTT 57.021 37.500 0.00 0.00 41.05 3.74
2398 3933 6.551601 AGTTCACAGCTACCATAATACTAGCT 59.448 38.462 0.00 0.00 43.26 3.32
2399 3934 6.750148 AGTTCACAGCTACCATAATACTAGC 58.250 40.000 0.00 0.00 34.27 3.42
2402 3937 8.705594 ACAATAGTTCACAGCTACCATAATACT 58.294 33.333 0.00 0.00 0.00 2.12
2403 3938 8.888579 ACAATAGTTCACAGCTACCATAATAC 57.111 34.615 0.00 0.00 0.00 1.89
2405 3940 8.705594 ACTACAATAGTTCACAGCTACCATAAT 58.294 33.333 0.00 0.00 34.86 1.28
2406 3941 8.074613 ACTACAATAGTTCACAGCTACCATAA 57.925 34.615 0.00 0.00 34.86 1.90
2407 3942 7.655521 ACTACAATAGTTCACAGCTACCATA 57.344 36.000 0.00 0.00 34.86 2.74
2408 3943 6.546428 ACTACAATAGTTCACAGCTACCAT 57.454 37.500 0.00 0.00 34.86 3.55
2409 3944 5.995565 ACTACAATAGTTCACAGCTACCA 57.004 39.130 0.00 0.00 34.86 3.25
2410 3945 7.275123 GTGTTACTACAATAGTTCACAGCTACC 59.725 40.741 13.86 0.00 39.66 3.18
2411 3946 7.811236 TGTGTTACTACAATAGTTCACAGCTAC 59.189 37.037 15.87 0.00 42.02 3.58
2412 3947 7.888424 TGTGTTACTACAATAGTTCACAGCTA 58.112 34.615 15.87 0.00 42.02 3.32
2413 3948 6.755206 TGTGTTACTACAATAGTTCACAGCT 58.245 36.000 15.87 0.00 42.02 4.24
2414 3949 7.330946 TCATGTGTTACTACAATAGTTCACAGC 59.669 37.037 20.40 10.16 45.57 4.40
2415 3950 8.757164 TCATGTGTTACTACAATAGTTCACAG 57.243 34.615 20.40 15.63 45.57 3.66
2416 3951 8.984764 GTTCATGTGTTACTACAATAGTTCACA 58.015 33.333 19.20 19.20 45.95 3.58
2417 3952 8.984764 TGTTCATGTGTTACTACAATAGTTCAC 58.015 33.333 12.74 12.74 40.14 3.18
2418 3953 8.984764 GTGTTCATGTGTTACTACAATAGTTCA 58.015 33.333 0.00 0.00 40.14 3.18
2419 3954 9.204570 AGTGTTCATGTGTTACTACAATAGTTC 57.795 33.333 0.00 0.00 40.14 3.01
2420 3955 9.204570 GAGTGTTCATGTGTTACTACAATAGTT 57.795 33.333 0.00 0.00 40.14 2.24
2421 3956 8.364894 TGAGTGTTCATGTGTTACTACAATAGT 58.635 33.333 0.00 0.00 42.68 2.12
2422 3957 8.757164 TGAGTGTTCATGTGTTACTACAATAG 57.243 34.615 0.00 0.00 35.69 1.73
2423 3958 8.364894 ACTGAGTGTTCATGTGTTACTACAATA 58.635 33.333 0.00 0.00 32.09 1.90
2424 3959 7.217200 ACTGAGTGTTCATGTGTTACTACAAT 58.783 34.615 0.00 0.00 32.09 2.71
2425 3960 6.578944 ACTGAGTGTTCATGTGTTACTACAA 58.421 36.000 0.00 0.00 32.09 2.41
2426 3961 6.156748 ACTGAGTGTTCATGTGTTACTACA 57.843 37.500 0.00 0.00 31.68 2.74
2440 3975 5.764686 TGATATGCACTTTGAACTGAGTGTT 59.235 36.000 0.00 0.00 43.94 3.32
2441 3976 5.308014 TGATATGCACTTTGAACTGAGTGT 58.692 37.500 0.00 0.00 43.94 3.55
2442 3977 5.868043 TGATATGCACTTTGAACTGAGTG 57.132 39.130 0.00 0.00 44.67 3.51
2443 3978 8.043113 TCTTATGATATGCACTTTGAACTGAGT 58.957 33.333 0.00 0.00 0.00 3.41
2444 3979 8.333908 GTCTTATGATATGCACTTTGAACTGAG 58.666 37.037 0.00 0.00 0.00 3.35
2445 3980 7.823799 TGTCTTATGATATGCACTTTGAACTGA 59.176 33.333 0.00 0.00 0.00 3.41
2446 3981 7.907045 GTGTCTTATGATATGCACTTTGAACTG 59.093 37.037 0.00 0.00 0.00 3.16
2447 3982 7.607607 TGTGTCTTATGATATGCACTTTGAACT 59.392 33.333 0.00 0.00 0.00 3.01
2448 3983 7.693951 GTGTGTCTTATGATATGCACTTTGAAC 59.306 37.037 0.00 0.00 0.00 3.18
2449 3984 7.607607 AGTGTGTCTTATGATATGCACTTTGAA 59.392 33.333 0.00 0.00 32.84 2.69
2450 3985 7.064966 CAGTGTGTCTTATGATATGCACTTTGA 59.935 37.037 0.00 0.00 34.25 2.69
2451 3986 7.184779 CAGTGTGTCTTATGATATGCACTTTG 58.815 38.462 0.00 7.72 34.25 2.77
2452 3987 6.317140 CCAGTGTGTCTTATGATATGCACTTT 59.683 38.462 0.00 0.00 34.25 2.66
2453 3988 5.819379 CCAGTGTGTCTTATGATATGCACTT 59.181 40.000 0.00 0.00 34.25 3.16
2454 3989 5.363101 CCAGTGTGTCTTATGATATGCACT 58.637 41.667 0.00 0.00 36.53 4.40
2455 3990 4.024556 GCCAGTGTGTCTTATGATATGCAC 60.025 45.833 0.00 0.00 0.00 4.57
2456 3991 4.129380 GCCAGTGTGTCTTATGATATGCA 58.871 43.478 0.00 0.00 0.00 3.96
2457 3992 3.185188 CGCCAGTGTGTCTTATGATATGC 59.815 47.826 0.00 0.00 0.00 3.14
2458 3993 3.742882 CCGCCAGTGTGTCTTATGATATG 59.257 47.826 0.00 0.00 0.00 1.78
2459 3994 3.641436 TCCGCCAGTGTGTCTTATGATAT 59.359 43.478 0.00 0.00 0.00 1.63
2460 3995 3.028130 TCCGCCAGTGTGTCTTATGATA 58.972 45.455 0.00 0.00 0.00 2.15
2461 3996 1.831106 TCCGCCAGTGTGTCTTATGAT 59.169 47.619 0.00 0.00 0.00 2.45
2462 3997 1.204704 CTCCGCCAGTGTGTCTTATGA 59.795 52.381 0.00 0.00 0.00 2.15
2463 3998 1.645034 CTCCGCCAGTGTGTCTTATG 58.355 55.000 0.00 0.00 0.00 1.90
2464 3999 0.108138 GCTCCGCCAGTGTGTCTTAT 60.108 55.000 0.00 0.00 0.00 1.73
2465 4000 1.292223 GCTCCGCCAGTGTGTCTTA 59.708 57.895 0.00 0.00 0.00 2.10
2466 4001 2.031163 GCTCCGCCAGTGTGTCTT 59.969 61.111 0.00 0.00 0.00 3.01
2484 4019 3.474570 CCCCTTGGCCTCCTCGAG 61.475 72.222 5.13 5.13 0.00 4.04
2503 4038 1.842052 TTTTGGAAGGGGGATTACGC 58.158 50.000 0.00 0.00 0.00 4.42
2504 4039 3.430236 GCAATTTTGGAAGGGGGATTACG 60.430 47.826 0.00 0.00 0.00 3.18
2505 4040 3.517500 TGCAATTTTGGAAGGGGGATTAC 59.482 43.478 0.00 0.00 0.00 1.89
2506 4041 3.796111 TGCAATTTTGGAAGGGGGATTA 58.204 40.909 0.00 0.00 0.00 1.75
2507 4042 2.630232 TGCAATTTTGGAAGGGGGATT 58.370 42.857 0.00 0.00 0.00 3.01
2508 4043 2.340721 TGCAATTTTGGAAGGGGGAT 57.659 45.000 0.00 0.00 0.00 3.85
2509 4044 2.340721 ATGCAATTTTGGAAGGGGGA 57.659 45.000 0.00 0.00 30.51 4.81
2510 4045 2.573009 AGAATGCAATTTTGGAAGGGGG 59.427 45.455 0.00 0.00 36.07 5.40
2511 4046 3.986996 AGAATGCAATTTTGGAAGGGG 57.013 42.857 0.00 0.00 36.07 4.79
2512 4047 6.936335 AGTAAAAGAATGCAATTTTGGAAGGG 59.064 34.615 14.45 0.00 36.07 3.95
2513 4048 7.967890 AGTAAAAGAATGCAATTTTGGAAGG 57.032 32.000 14.45 0.00 36.07 3.46
2514 4049 9.474920 TGTAGTAAAAGAATGCAATTTTGGAAG 57.525 29.630 14.45 0.00 36.07 3.46
2515 4050 9.995003 ATGTAGTAAAAGAATGCAATTTTGGAA 57.005 25.926 14.45 1.77 36.07 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.