Multiple sequence alignment - TraesCS3D01G071800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G071800 chr3D 100.000 4503 0 0 1 4503 32086728 32082226 0.000000e+00 8316
1 TraesCS3D01G071800 chr3D 88.357 2465 152 42 1484 3891 32008738 32006352 0.000000e+00 2837
2 TraesCS3D01G071800 chr3D 98.842 691 6 2 1 691 32094122 32093434 0.000000e+00 1230
3 TraesCS3D01G071800 chr3D 87.403 643 41 20 833 1442 32009379 32008744 0.000000e+00 702
4 TraesCS3D01G071800 chr3D 80.178 1014 126 36 2755 3729 31994489 31993512 0.000000e+00 689
5 TraesCS3D01G071800 chr3D 92.689 383 24 3 4122 4503 476214738 476215117 2.370000e-152 549
6 TraesCS3D01G071800 chr3D 91.885 382 28 2 4122 4503 525775847 525775469 8.580000e-147 531
7 TraesCS3D01G071800 chr3D 80.863 371 39 18 2197 2556 32001826 32001477 3.450000e-66 263
8 TraesCS3D01G071800 chr3D 100.000 83 0 0 692 774 571197508 571197590 2.170000e-33 154
9 TraesCS3D01G071800 chr3B 88.421 2686 230 36 1484 4113 54620798 54618138 0.000000e+00 3162
10 TraesCS3D01G071800 chr3B 89.379 612 26 11 856 1442 54621401 54620804 0.000000e+00 734
11 TraesCS3D01G071800 chr3B 84.179 335 38 11 3092 3413 54612379 54612047 1.220000e-80 311
12 TraesCS3D01G071800 chr3B 78.591 369 48 10 2197 2556 54613467 54613121 9.810000e-52 215
13 TraesCS3D01G071800 chr3B 75.670 485 57 31 1000 1460 54614133 54613686 7.690000e-43 185
14 TraesCS3D01G071800 chr3B 97.727 88 1 1 692 779 586726297 586726383 2.810000e-32 150
15 TraesCS3D01G071800 chr3B 97.619 84 2 0 692 775 755445475 755445392 1.310000e-30 145
16 TraesCS3D01G071800 chr3B 78.325 203 34 7 1977 2171 54612895 54612695 6.120000e-24 122
17 TraesCS3D01G071800 chr3A 89.877 2203 156 32 776 2934 44458664 44456485 0.000000e+00 2771
18 TraesCS3D01G071800 chr3A 89.733 974 60 14 2941 3891 44454016 44453060 0.000000e+00 1208
19 TraesCS3D01G071800 chr3A 78.692 1544 224 65 2305 3782 44447489 44445985 0.000000e+00 931
20 TraesCS3D01G071800 chr3A 87.225 227 23 5 3894 4115 44453099 44452874 2.080000e-63 254
21 TraesCS3D01G071800 chr5D 96.844 697 16 6 1 694 98636864 98636171 0.000000e+00 1160
22 TraesCS3D01G071800 chr5D 96.237 691 23 3 1 691 289871215 289870528 0.000000e+00 1129
23 TraesCS3D01G071800 chr5D 92.545 389 20 4 4122 4503 200381502 200381116 2.370000e-152 549
24 TraesCS3D01G071800 chr5D 92.147 382 27 3 4122 4503 202028847 202029225 1.840000e-148 536
25 TraesCS3D01G071800 chr5D 98.810 84 1 0 692 775 103633373 103633456 2.810000e-32 150
26 TraesCS3D01G071800 chr1D 96.961 691 19 2 1 691 242791096 242791784 0.000000e+00 1158
27 TraesCS3D01G071800 chr1D 91.645 383 26 5 4122 4503 101493480 101493857 3.990000e-145 525
28 TraesCS3D01G071800 chr1D 98.810 84 1 0 692 775 188209618 188209535 2.810000e-32 150
29 TraesCS3D01G071800 chr2D 96.532 692 22 2 1 691 55510047 55510737 0.000000e+00 1144
30 TraesCS3D01G071800 chr2D 96.237 691 23 3 1 691 321152820 321153507 0.000000e+00 1129
31 TraesCS3D01G071800 chr6D 96.527 691 20 4 1 691 376776146 376776832 0.000000e+00 1140
32 TraesCS3D01G071800 chr4D 96.248 693 23 3 1 691 274869170 274869861 0.000000e+00 1133
33 TraesCS3D01G071800 chr4D 96.115 695 22 4 1 691 274876279 274876972 0.000000e+00 1129
34 TraesCS3D01G071800 chr4D 94.764 382 18 1 4122 4503 20257373 20256994 1.080000e-165 593
35 TraesCS3D01G071800 chr7D 93.194 382 24 1 4122 4503 430865028 430864649 1.090000e-155 560
36 TraesCS3D01G071800 chr7D 92.448 384 22 5 4122 4503 399925265 399925643 3.960000e-150 542
37 TraesCS3D01G071800 chr2B 92.147 382 28 1 4122 4503 701529070 701528691 5.130000e-149 538
38 TraesCS3D01G071800 chr5A 95.699 93 4 0 692 784 51415852 51415944 2.810000e-32 150
39 TraesCS3D01G071800 chr1B 95.652 92 4 0 692 783 534169270 534169361 1.010000e-31 148
40 TraesCS3D01G071800 chr5B 98.765 81 1 0 692 772 484636164 484636244 1.310000e-30 145
41 TraesCS3D01G071800 chr4A 97.619 84 2 0 692 775 645493179 645493096 1.310000e-30 145


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G071800 chr3D 32082226 32086728 4502 True 8316.00 8316 100.00000 1 4503 1 chr3D.!!$R3 4502
1 TraesCS3D01G071800 chr3D 32006352 32009379 3027 True 1769.50 2837 87.88000 833 3891 2 chr3D.!!$R6 3058
2 TraesCS3D01G071800 chr3D 32093434 32094122 688 True 1230.00 1230 98.84200 1 691 1 chr3D.!!$R4 690
3 TraesCS3D01G071800 chr3D 31993512 31994489 977 True 689.00 689 80.17800 2755 3729 1 chr3D.!!$R1 974
4 TraesCS3D01G071800 chr3B 54618138 54621401 3263 True 1948.00 3162 88.90000 856 4113 2 chr3B.!!$R3 3257
5 TraesCS3D01G071800 chr3B 54612047 54614133 2086 True 208.25 311 79.19125 1000 3413 4 chr3B.!!$R2 2413
6 TraesCS3D01G071800 chr3A 44452874 44458664 5790 True 1411.00 2771 88.94500 776 4115 3 chr3A.!!$R2 3339
7 TraesCS3D01G071800 chr3A 44445985 44447489 1504 True 931.00 931 78.69200 2305 3782 1 chr3A.!!$R1 1477
8 TraesCS3D01G071800 chr5D 98636171 98636864 693 True 1160.00 1160 96.84400 1 694 1 chr5D.!!$R1 693
9 TraesCS3D01G071800 chr5D 289870528 289871215 687 True 1129.00 1129 96.23700 1 691 1 chr5D.!!$R3 690
10 TraesCS3D01G071800 chr1D 242791096 242791784 688 False 1158.00 1158 96.96100 1 691 1 chr1D.!!$F2 690
11 TraesCS3D01G071800 chr2D 55510047 55510737 690 False 1144.00 1144 96.53200 1 691 1 chr2D.!!$F1 690
12 TraesCS3D01G071800 chr2D 321152820 321153507 687 False 1129.00 1129 96.23700 1 691 1 chr2D.!!$F2 690
13 TraesCS3D01G071800 chr6D 376776146 376776832 686 False 1140.00 1140 96.52700 1 691 1 chr6D.!!$F1 690
14 TraesCS3D01G071800 chr4D 274869170 274869861 691 False 1133.00 1133 96.24800 1 691 1 chr4D.!!$F1 690
15 TraesCS3D01G071800 chr4D 274876279 274876972 693 False 1129.00 1129 96.11500 1 691 1 chr4D.!!$F2 690

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
729 740 0.032815 GCCTCGGGTGAGCTAGAATC 59.967 60.0 0.00 0.0 41.13 2.52 F
978 1018 0.179150 GCAACTCCAACAACAACGCA 60.179 50.0 0.00 0.0 0.00 5.24 F
1353 1430 0.870307 CTTTCGATTCCCGCGTCGAT 60.870 55.0 18.33 2.9 45.13 3.59 F
2413 2593 0.981183 TATTGCTCACCCCGTCTTGT 59.019 50.0 0.00 0.0 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2548 2748 0.807667 CGCCTCCAATCTTGTCCTCG 60.808 60.000 0.00 0.00 0.00 4.63 R
2737 2948 0.964700 TCTCAGACACTCACCTGCAG 59.035 55.000 6.78 6.78 0.00 4.41 R
3127 5830 1.061131 CTATGGAACTTGCTGAACGCG 59.939 52.381 3.53 3.53 43.27 6.01 R
4329 7083 0.031585 GAAAAGTGGTTTCGTGGCCC 59.968 55.000 0.00 0.00 36.52 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
419 426 0.673437 CCATGTGCTGACCCGTTTTT 59.327 50.000 0.00 0.00 0.00 1.94
460 467 3.620929 TGCAGGATATCTTACGACGAC 57.379 47.619 0.00 0.00 0.00 4.34
556 565 4.487714 ACTTCCGCTATTTGGATTGAGA 57.512 40.909 0.00 0.00 34.91 3.27
664 675 4.560128 GATGACACTTAAGCACAGAGACA 58.440 43.478 1.29 0.00 0.00 3.41
691 702 4.487412 CGGGTCGGGTCGCTACAC 62.487 72.222 0.00 0.00 0.00 2.90
694 705 2.643232 GGTCGGGTCGCTACACCTT 61.643 63.158 0.00 0.00 36.57 3.50
695 706 1.445582 GTCGGGTCGCTACACCTTG 60.446 63.158 0.00 0.00 36.57 3.61
696 707 2.813908 CGGGTCGCTACACCTTGC 60.814 66.667 0.00 0.00 36.57 4.01
697 708 2.663196 GGGTCGCTACACCTTGCT 59.337 61.111 0.00 0.00 36.57 3.91
698 709 1.003718 GGGTCGCTACACCTTGCTT 60.004 57.895 0.00 0.00 36.57 3.91
699 710 1.298859 GGGTCGCTACACCTTGCTTG 61.299 60.000 0.00 0.00 36.57 4.01
700 711 0.602905 GGTCGCTACACCTTGCTTGT 60.603 55.000 0.00 0.00 33.08 3.16
701 712 1.337447 GGTCGCTACACCTTGCTTGTA 60.337 52.381 0.00 0.00 33.08 2.41
702 713 2.618053 GTCGCTACACCTTGCTTGTAT 58.382 47.619 0.00 0.00 0.00 2.29
703 714 2.348666 GTCGCTACACCTTGCTTGTATG 59.651 50.000 0.00 0.00 0.00 2.39
704 715 2.232696 TCGCTACACCTTGCTTGTATGA 59.767 45.455 0.00 0.00 0.00 2.15
705 716 2.604914 CGCTACACCTTGCTTGTATGAG 59.395 50.000 0.00 0.00 0.00 2.90
706 717 2.352960 GCTACACCTTGCTTGTATGAGC 59.647 50.000 0.00 0.00 43.00 4.26
707 718 2.867109 ACACCTTGCTTGTATGAGCT 57.133 45.000 0.00 0.00 43.11 4.09
708 719 3.981071 ACACCTTGCTTGTATGAGCTA 57.019 42.857 0.00 0.00 43.11 3.32
709 720 4.494091 ACACCTTGCTTGTATGAGCTAT 57.506 40.909 0.00 0.00 43.11 2.97
710 721 4.194640 ACACCTTGCTTGTATGAGCTATG 58.805 43.478 0.00 0.00 43.11 2.23
711 722 3.003068 CACCTTGCTTGTATGAGCTATGC 59.997 47.826 0.00 0.00 43.11 3.14
712 723 2.551459 CCTTGCTTGTATGAGCTATGCC 59.449 50.000 0.00 0.00 43.11 4.40
713 724 3.474600 CTTGCTTGTATGAGCTATGCCT 58.525 45.455 0.00 0.00 43.11 4.75
714 725 3.117491 TGCTTGTATGAGCTATGCCTC 57.883 47.619 0.00 0.00 43.11 4.70
715 726 2.064762 GCTTGTATGAGCTATGCCTCG 58.935 52.381 0.00 0.00 39.57 4.63
716 727 2.681706 CTTGTATGAGCTATGCCTCGG 58.318 52.381 0.00 0.00 34.56 4.63
717 728 0.969149 TGTATGAGCTATGCCTCGGG 59.031 55.000 0.00 0.00 34.56 5.14
718 729 0.969894 GTATGAGCTATGCCTCGGGT 59.030 55.000 0.00 0.00 34.56 5.28
719 730 0.969149 TATGAGCTATGCCTCGGGTG 59.031 55.000 0.00 0.00 34.56 4.61
720 731 0.760567 ATGAGCTATGCCTCGGGTGA 60.761 55.000 0.00 0.00 34.56 4.02
721 732 1.365633 GAGCTATGCCTCGGGTGAG 59.634 63.158 0.00 0.00 42.18 3.51
722 733 2.280457 GCTATGCCTCGGGTGAGC 60.280 66.667 0.00 0.00 41.13 4.26
723 734 2.801631 GCTATGCCTCGGGTGAGCT 61.802 63.158 0.00 0.00 41.13 4.09
724 735 1.464376 GCTATGCCTCGGGTGAGCTA 61.464 60.000 0.00 0.00 41.13 3.32
725 736 0.600557 CTATGCCTCGGGTGAGCTAG 59.399 60.000 0.00 0.00 41.13 3.42
726 737 0.185175 TATGCCTCGGGTGAGCTAGA 59.815 55.000 0.00 0.00 41.13 2.43
727 738 0.687757 ATGCCTCGGGTGAGCTAGAA 60.688 55.000 0.00 0.00 41.13 2.10
728 739 0.687757 TGCCTCGGGTGAGCTAGAAT 60.688 55.000 0.00 0.00 41.13 2.40
729 740 0.032815 GCCTCGGGTGAGCTAGAATC 59.967 60.000 0.00 0.00 41.13 2.52
730 741 0.676736 CCTCGGGTGAGCTAGAATCC 59.323 60.000 0.00 0.00 41.13 3.01
731 742 1.698506 CTCGGGTGAGCTAGAATCCT 58.301 55.000 0.00 0.00 34.96 3.24
732 743 2.489255 CCTCGGGTGAGCTAGAATCCTA 60.489 54.545 0.00 0.00 41.13 2.94
733 744 3.426615 CTCGGGTGAGCTAGAATCCTAT 58.573 50.000 0.00 0.00 34.96 2.57
734 745 3.829601 CTCGGGTGAGCTAGAATCCTATT 59.170 47.826 0.00 0.00 34.96 1.73
735 746 3.574396 TCGGGTGAGCTAGAATCCTATTG 59.426 47.826 0.00 0.00 0.00 1.90
736 747 3.669536 GGGTGAGCTAGAATCCTATTGC 58.330 50.000 0.00 0.00 0.00 3.56
737 748 3.558109 GGGTGAGCTAGAATCCTATTGCC 60.558 52.174 0.00 0.00 0.00 4.52
738 749 3.326297 GGTGAGCTAGAATCCTATTGCCT 59.674 47.826 0.00 0.00 0.00 4.75
739 750 4.314121 GTGAGCTAGAATCCTATTGCCTG 58.686 47.826 0.00 0.00 0.00 4.85
740 751 3.326006 TGAGCTAGAATCCTATTGCCTGG 59.674 47.826 0.00 0.00 0.00 4.45
741 752 2.039613 AGCTAGAATCCTATTGCCTGGC 59.960 50.000 12.87 12.87 0.00 4.85
742 753 2.039613 GCTAGAATCCTATTGCCTGGCT 59.960 50.000 21.03 2.51 0.00 4.75
743 754 2.653234 AGAATCCTATTGCCTGGCTG 57.347 50.000 21.03 7.34 0.00 4.85
744 755 1.144503 AGAATCCTATTGCCTGGCTGG 59.855 52.381 21.03 15.71 39.35 4.85
745 756 0.186873 AATCCTATTGCCTGGCTGGG 59.813 55.000 21.03 12.04 36.00 4.45
753 764 4.762016 CCTGGCTGGGCATGTTTA 57.238 55.556 1.84 0.00 0.00 2.01
754 765 2.496942 CCTGGCTGGGCATGTTTAG 58.503 57.895 1.84 0.00 0.00 1.85
755 766 1.669999 CCTGGCTGGGCATGTTTAGC 61.670 60.000 1.84 8.19 35.49 3.09
756 767 0.682209 CTGGCTGGGCATGTTTAGCT 60.682 55.000 13.99 0.00 36.45 3.32
757 768 0.623194 TGGCTGGGCATGTTTAGCTA 59.377 50.000 13.99 7.78 36.45 3.32
758 769 1.312815 GGCTGGGCATGTTTAGCTAG 58.687 55.000 13.99 0.00 36.45 3.42
759 770 1.134098 GGCTGGGCATGTTTAGCTAGA 60.134 52.381 13.99 0.00 36.45 2.43
760 771 2.216898 GCTGGGCATGTTTAGCTAGAG 58.783 52.381 0.00 0.00 33.53 2.43
761 772 2.158900 GCTGGGCATGTTTAGCTAGAGA 60.159 50.000 0.00 0.00 33.53 3.10
762 773 3.682718 GCTGGGCATGTTTAGCTAGAGAA 60.683 47.826 0.00 0.00 33.53 2.87
763 774 3.873910 TGGGCATGTTTAGCTAGAGAAC 58.126 45.455 0.00 0.00 0.00 3.01
764 775 3.206964 GGGCATGTTTAGCTAGAGAACC 58.793 50.000 0.00 1.04 0.00 3.62
765 776 3.370527 GGGCATGTTTAGCTAGAGAACCA 60.371 47.826 0.00 0.00 0.00 3.67
766 777 4.261801 GGCATGTTTAGCTAGAGAACCAA 58.738 43.478 0.00 0.00 0.00 3.67
767 778 4.700213 GGCATGTTTAGCTAGAGAACCAAA 59.300 41.667 0.00 0.00 0.00 3.28
768 779 5.392057 GGCATGTTTAGCTAGAGAACCAAAC 60.392 44.000 0.00 1.79 0.00 2.93
769 780 5.181245 GCATGTTTAGCTAGAGAACCAAACA 59.819 40.000 9.02 9.02 39.41 2.83
770 781 6.603095 CATGTTTAGCTAGAGAACCAAACAC 58.397 40.000 8.83 0.00 38.33 3.32
771 782 5.676552 TGTTTAGCTAGAGAACCAAACACA 58.323 37.500 3.62 0.00 32.58 3.72
772 783 5.526111 TGTTTAGCTAGAGAACCAAACACAC 59.474 40.000 3.62 0.00 32.58 3.82
773 784 3.127425 AGCTAGAGAACCAAACACACC 57.873 47.619 0.00 0.00 0.00 4.16
774 785 2.152016 GCTAGAGAACCAAACACACCC 58.848 52.381 0.00 0.00 0.00 4.61
790 801 1.442520 CCCGAAATTGCAGCGTGTG 60.443 57.895 0.00 0.00 0.00 3.82
920 940 2.549754 CGCAAAATCACAACTGACCTCT 59.450 45.455 0.00 0.00 0.00 3.69
925 965 0.601558 TCACAACTGACCTCTACGCC 59.398 55.000 0.00 0.00 0.00 5.68
926 966 0.317160 CACAACTGACCTCTACGCCA 59.683 55.000 0.00 0.00 0.00 5.69
928 968 0.888619 CAACTGACCTCTACGCCAGA 59.111 55.000 0.00 0.00 0.00 3.86
978 1018 0.179150 GCAACTCCAACAACAACGCA 60.179 50.000 0.00 0.00 0.00 5.24
1332 1404 2.750888 GCGAACGATCACCCCTTGC 61.751 63.158 0.00 0.00 0.00 4.01
1333 1405 1.079127 CGAACGATCACCCCTTGCT 60.079 57.895 0.00 0.00 0.00 3.91
1348 1425 1.358725 TTGCTCTTTCGATTCCCGCG 61.359 55.000 0.00 0.00 38.37 6.46
1353 1430 0.870307 CTTTCGATTCCCGCGTCGAT 60.870 55.000 18.33 2.90 45.13 3.59
1395 1478 1.796796 GGAAATCGCGAGCAGCTTT 59.203 52.632 16.66 9.87 45.59 3.51
1399 1483 1.089920 AATCGCGAGCAGCTTTTGAT 58.910 45.000 16.66 0.00 45.59 2.57
1447 1541 2.053747 TTGGGGTGTTCAGTCCCTAT 57.946 50.000 10.81 0.00 43.00 2.57
1450 1544 3.533146 TGGGGTGTTCAGTCCCTATTTA 58.467 45.455 10.81 0.00 43.00 1.40
1451 1545 3.521937 TGGGGTGTTCAGTCCCTATTTAG 59.478 47.826 10.81 0.00 43.00 1.85
1664 1794 5.877012 CACTAGCTGGATTGTTTACAGACAT 59.123 40.000 3.17 0.00 34.21 3.06
1675 1805 8.871686 ATTGTTTACAGACATTTTTCTTGACC 57.128 30.769 0.00 0.00 0.00 4.02
1739 1871 6.808008 TTGAATTTTGAGATCTGAGTGGTC 57.192 37.500 0.00 0.00 0.00 4.02
1885 2017 2.094286 CAGCTGAGATCCAGAACGAAGT 60.094 50.000 8.42 0.00 45.78 3.01
1914 2046 9.793259 GTCAAGGTATAAATTGATCATCCCTTA 57.207 33.333 0.00 0.00 37.72 2.69
1940 2072 7.609760 TGCAATTGGTACTTATAGAACACAG 57.390 36.000 7.72 0.00 0.00 3.66
1964 2139 9.033481 CAGTATCTCTGAGATTGACTGAATTTC 57.967 37.037 29.83 5.73 40.91 2.17
2018 2197 4.883006 AGAGGAGTACGTTTCTGAGGATAC 59.117 45.833 0.00 0.00 0.00 2.24
2103 2282 1.344953 CGGTTGGATCTGGGATCCCA 61.345 60.000 31.83 31.83 45.02 4.37
2302 2482 2.437359 GCGTGAAGATGGGCTGCT 60.437 61.111 0.00 0.00 0.00 4.24
2349 2529 2.685850 ACTAAATACACCACGGGCTC 57.314 50.000 0.00 0.00 0.00 4.70
2361 2541 2.506061 CGGGCTCCTGGAGATGAGG 61.506 68.421 27.53 7.04 0.00 3.86
2413 2593 0.981183 TATTGCTCACCCCGTCTTGT 59.019 50.000 0.00 0.00 0.00 3.16
2469 2660 4.514441 GGCAGTTCATCATGAGTAGAATGG 59.486 45.833 0.09 3.84 0.00 3.16
2472 2663 6.686378 GCAGTTCATCATGAGTAGAATGGGTA 60.686 42.308 0.09 0.00 0.00 3.69
2537 2737 5.244402 TGAATGGAATGTTCAAATGCAGAGT 59.756 36.000 0.00 0.00 32.98 3.24
2548 2748 4.458989 TCAAATGCAGAGTGGTATGTTTCC 59.541 41.667 0.00 0.00 0.00 3.13
2737 2948 9.878599 CCATTTCTCGGTAATATTTTGTATCAC 57.121 33.333 0.00 0.00 0.00 3.06
2868 3079 6.033937 GCATTTTATGAAAAAGGAGAACGAGC 59.966 38.462 0.00 0.00 38.36 5.03
2934 3145 7.774625 AGTACTATAAGAAGACCGTAAGCTCTT 59.225 37.037 0.00 0.00 0.00 2.85
2960 5633 1.615883 CTCGTACCAGCATGCCTCTAT 59.384 52.381 15.66 0.00 31.97 1.98
2966 5643 5.577164 CGTACCAGCATGCCTCTATATTAAC 59.423 44.000 15.66 0.00 31.97 2.01
2967 5644 4.911390 ACCAGCATGCCTCTATATTAACC 58.089 43.478 15.66 0.00 31.97 2.85
2969 5646 5.073691 ACCAGCATGCCTCTATATTAACCTT 59.926 40.000 15.66 0.00 31.97 3.50
3021 5709 6.939730 TGAATAACTAATGCCACTGTCTTGAA 59.060 34.615 0.00 0.00 0.00 2.69
3028 5716 2.171659 TGCCACTGTCTTGAACAACCTA 59.828 45.455 0.00 0.00 37.45 3.08
3106 5807 3.861840 AGGGACATCACATGTAGTTTCG 58.138 45.455 0.00 0.00 45.03 3.46
3127 5830 5.224888 TCGGTCGGATGCTATAAAATGTAC 58.775 41.667 0.00 0.00 0.00 2.90
3211 5925 7.810658 AGTTATCGCATCATTACAATGGAATC 58.189 34.615 2.26 0.00 37.03 2.52
3298 6016 7.315066 TCCATTTAGCTGTCATATGACCATA 57.685 36.000 28.64 17.24 44.15 2.74
3455 6185 3.246112 ACTACCGCAACTGCCCCA 61.246 61.111 0.00 0.00 37.91 4.96
3527 6265 4.820897 TCCTGTGAAGTTATGCTGTGTAG 58.179 43.478 0.00 0.00 0.00 2.74
3535 6273 5.848833 AGTTATGCTGTGTAGTACCTACC 57.151 43.478 0.00 0.00 36.24 3.18
3536 6274 4.648307 AGTTATGCTGTGTAGTACCTACCC 59.352 45.833 0.00 0.00 36.24 3.69
3537 6275 1.466856 TGCTGTGTAGTACCTACCCG 58.533 55.000 0.00 0.00 36.24 5.28
3538 6276 0.101939 GCTGTGTAGTACCTACCCGC 59.898 60.000 0.00 0.00 36.24 6.13
3541 6279 2.877168 CTGTGTAGTACCTACCCGCTAG 59.123 54.545 0.00 0.00 36.24 3.42
3643 6381 2.541999 GCTCTAGTGGCAGCTAGTTACG 60.542 54.545 17.67 10.04 39.44 3.18
3661 6399 5.124457 AGTTACGGCGTATCTTAGAAACAGA 59.876 40.000 21.66 0.00 0.00 3.41
3682 6421 5.637810 CAGATTTGCTGCAGAACATGAAATT 59.362 36.000 20.43 0.00 37.90 1.82
3712 6451 4.081972 GCACTTGATCTGTTCAGTCTCCTA 60.082 45.833 0.00 0.00 35.27 2.94
3729 6470 7.984050 CAGTCTCCTATGATGTTTATGTGAACT 59.016 37.037 0.00 0.00 0.00 3.01
3736 6477 7.765695 ATGATGTTTATGTGAACTTGAAGGT 57.234 32.000 0.00 0.00 0.00 3.50
3757 6498 9.959749 GAAGGTCTAGTCTGATTAGTATTGAAG 57.040 37.037 7.03 0.00 0.00 3.02
3782 6529 4.894784 TCTGGGAAACAACTTACTAGCAG 58.105 43.478 0.00 0.00 0.00 4.24
3788 6535 5.106908 GGAAACAACTTACTAGCAGAGCAAG 60.107 44.000 0.00 0.00 0.00 4.01
3861 6608 5.469760 TGCCATATGAGTATGCACATTGTAC 59.530 40.000 3.65 0.00 37.06 2.90
3862 6609 5.389830 GCCATATGAGTATGCACATTGTACG 60.390 44.000 3.65 0.00 37.06 3.67
3891 6640 3.709653 TGACCAGGTAGTCAAAAGTCTGT 59.290 43.478 0.00 0.00 43.65 3.41
3904 6653 3.769739 AAGTCTGTGCATTGTAGGACA 57.230 42.857 0.00 0.00 37.52 4.02
3907 6656 4.655963 AGTCTGTGCATTGTAGGACAATT 58.344 39.130 2.09 0.00 45.80 2.32
3919 6668 7.681939 TTGTAGGACAATTATTTGACCAGAC 57.318 36.000 17.18 14.64 46.21 3.51
4007 6757 6.377146 TCTGAAAGAAGGTGCACTTTAGTTTT 59.623 34.615 14.87 14.42 42.31 2.43
4019 6769 5.281727 CACTTTAGTTTTGGCCTGAACTTC 58.718 41.667 23.25 5.44 37.32 3.01
4024 6774 1.032014 TTTGGCCTGAACTTCAGCAC 58.968 50.000 12.69 8.24 42.98 4.40
4028 6778 2.158682 TGGCCTGAACTTCAGCACTAAA 60.159 45.455 12.69 0.00 42.98 1.85
4030 6780 2.878406 GCCTGAACTTCAGCACTAAACA 59.122 45.455 12.69 0.00 42.98 2.83
4035 6785 2.772287 ACTTCAGCACTAAACAGGCTC 58.228 47.619 0.00 0.00 35.27 4.70
4050 6800 4.008330 ACAGGCTCATTCTGATTGACTTG 58.992 43.478 0.00 5.77 36.22 3.16
4059 6809 9.327628 CTCATTCTGATTGACTTGACTATTCAT 57.672 33.333 0.00 0.00 0.00 2.57
4073 6823 7.675161 TGACTATTCATATGGGAGTTTCTCA 57.325 36.000 2.13 0.00 31.08 3.27
4086 6836 6.271391 TGGGAGTTTCTCAGGTGATAAAACTA 59.729 38.462 15.36 4.18 38.71 2.24
4089 6839 7.119407 GGAGTTTCTCAGGTGATAAAACTAACC 59.881 40.741 15.36 11.73 38.71 2.85
4090 6840 6.940867 AGTTTCTCAGGTGATAAAACTAACCC 59.059 38.462 14.42 0.00 37.76 4.11
4091 6841 5.080969 TCTCAGGTGATAAAACTAACCCG 57.919 43.478 0.00 0.00 32.85 5.28
4099 6853 7.713942 AGGTGATAAAACTAACCCGATATTGAC 59.286 37.037 0.00 0.00 32.85 3.18
4103 6857 4.724074 AACTAACCCGATATTGACGACA 57.276 40.909 0.00 0.00 0.00 4.35
4118 6872 2.787723 CGACATGGAAATGACGTGTC 57.212 50.000 0.00 7.51 46.34 3.67
4121 6875 2.426522 ACATGGAAATGACGTGTCAGG 58.573 47.619 8.82 0.00 43.61 3.86
4122 6876 2.038426 ACATGGAAATGACGTGTCAGGA 59.962 45.455 8.82 0.00 43.61 3.86
4123 6877 2.920724 TGGAAATGACGTGTCAGGAA 57.079 45.000 8.82 0.00 43.61 3.36
4124 6878 3.201353 TGGAAATGACGTGTCAGGAAA 57.799 42.857 8.82 0.00 43.61 3.13
4125 6879 3.546724 TGGAAATGACGTGTCAGGAAAA 58.453 40.909 8.82 0.00 43.61 2.29
4126 6880 3.563808 TGGAAATGACGTGTCAGGAAAAG 59.436 43.478 8.82 0.00 43.61 2.27
4127 6881 3.058224 GGAAATGACGTGTCAGGAAAAGG 60.058 47.826 8.82 0.00 43.61 3.11
4128 6882 3.485463 AATGACGTGTCAGGAAAAGGA 57.515 42.857 8.82 0.00 43.61 3.36
4129 6883 2.992124 TGACGTGTCAGGAAAAGGAA 57.008 45.000 0.00 0.00 34.14 3.36
4130 6884 3.485463 TGACGTGTCAGGAAAAGGAAT 57.515 42.857 0.00 0.00 34.14 3.01
4131 6885 4.610605 TGACGTGTCAGGAAAAGGAATA 57.389 40.909 0.00 0.00 34.14 1.75
4132 6886 5.160607 TGACGTGTCAGGAAAAGGAATAT 57.839 39.130 0.00 0.00 34.14 1.28
4133 6887 5.175859 TGACGTGTCAGGAAAAGGAATATC 58.824 41.667 0.00 0.00 34.14 1.63
4134 6888 5.160607 ACGTGTCAGGAAAAGGAATATCA 57.839 39.130 0.00 0.00 0.00 2.15
4135 6889 5.556915 ACGTGTCAGGAAAAGGAATATCAA 58.443 37.500 0.00 0.00 0.00 2.57
4136 6890 6.001460 ACGTGTCAGGAAAAGGAATATCAAA 58.999 36.000 0.00 0.00 0.00 2.69
4137 6891 6.072673 ACGTGTCAGGAAAAGGAATATCAAAC 60.073 38.462 0.00 0.00 0.00 2.93
4138 6892 6.314784 GTGTCAGGAAAAGGAATATCAAACG 58.685 40.000 0.00 0.00 0.00 3.60
4139 6893 5.414454 TGTCAGGAAAAGGAATATCAAACGG 59.586 40.000 0.00 0.00 0.00 4.44
4140 6894 5.646360 GTCAGGAAAAGGAATATCAAACGGA 59.354 40.000 0.00 0.00 0.00 4.69
4141 6895 6.150474 GTCAGGAAAAGGAATATCAAACGGAA 59.850 38.462 0.00 0.00 0.00 4.30
4142 6896 6.889722 TCAGGAAAAGGAATATCAAACGGAAT 59.110 34.615 0.00 0.00 0.00 3.01
4143 6897 7.067008 TCAGGAAAAGGAATATCAAACGGAATC 59.933 37.037 0.00 0.00 0.00 2.52
4144 6898 6.321435 AGGAAAAGGAATATCAAACGGAATCC 59.679 38.462 0.00 0.00 0.00 3.01
4145 6899 6.096282 GGAAAAGGAATATCAAACGGAATCCA 59.904 38.462 0.00 0.00 32.27 3.41
4146 6900 7.363443 GGAAAAGGAATATCAAACGGAATCCAA 60.363 37.037 0.00 0.00 32.27 3.53
4147 6901 7.475137 AAAGGAATATCAAACGGAATCCAAA 57.525 32.000 0.00 0.00 32.27 3.28
4148 6902 7.660030 AAGGAATATCAAACGGAATCCAAAT 57.340 32.000 0.00 0.00 32.27 2.32
4149 6903 7.042797 AGGAATATCAAACGGAATCCAAATG 57.957 36.000 0.00 0.00 32.27 2.32
4150 6904 6.040842 AGGAATATCAAACGGAATCCAAATGG 59.959 38.462 0.00 0.00 32.27 3.16
4170 6924 4.496670 CGAAACCTTCGCGGAGAT 57.503 55.556 18.24 0.00 46.97 2.75
4171 6925 2.288969 CGAAACCTTCGCGGAGATC 58.711 57.895 18.24 10.24 46.97 2.75
4172 6926 0.179134 CGAAACCTTCGCGGAGATCT 60.179 55.000 18.24 0.00 46.97 2.75
4173 6927 1.736032 CGAAACCTTCGCGGAGATCTT 60.736 52.381 18.24 5.58 46.97 2.40
4174 6928 2.347731 GAAACCTTCGCGGAGATCTTT 58.652 47.619 18.24 10.09 36.31 2.52
4175 6929 2.474410 AACCTTCGCGGAGATCTTTT 57.526 45.000 18.24 0.00 36.31 2.27
4176 6930 2.474410 ACCTTCGCGGAGATCTTTTT 57.526 45.000 18.24 0.00 36.31 1.94
4197 6951 7.969536 TTTTTGAAACAAACACAATTCAGGA 57.030 28.000 0.00 0.00 33.71 3.86
4198 6952 7.593875 TTTTGAAACAAACACAATTCAGGAG 57.406 32.000 0.00 0.00 33.71 3.69
4199 6953 6.522625 TTGAAACAAACACAATTCAGGAGA 57.477 33.333 0.00 0.00 33.71 3.71
4200 6954 5.890334 TGAAACAAACACAATTCAGGAGAC 58.110 37.500 0.00 0.00 0.00 3.36
4201 6955 5.652014 TGAAACAAACACAATTCAGGAGACT 59.348 36.000 0.00 0.00 46.44 3.24
4202 6956 6.152661 TGAAACAAACACAATTCAGGAGACTT 59.847 34.615 0.00 0.00 40.21 3.01
4203 6957 5.505173 ACAAACACAATTCAGGAGACTTG 57.495 39.130 0.00 0.00 40.21 3.16
4204 6958 4.339247 ACAAACACAATTCAGGAGACTTGG 59.661 41.667 0.00 0.00 40.21 3.61
4205 6959 4.437682 AACACAATTCAGGAGACTTGGA 57.562 40.909 0.00 0.00 40.21 3.53
4206 6960 4.013267 ACACAATTCAGGAGACTTGGAG 57.987 45.455 0.00 0.00 40.21 3.86
4207 6961 3.392616 ACACAATTCAGGAGACTTGGAGT 59.607 43.478 0.00 0.00 40.21 3.85
4208 6962 3.750130 CACAATTCAGGAGACTTGGAGTG 59.250 47.826 0.00 0.00 40.21 3.51
4209 6963 3.244700 ACAATTCAGGAGACTTGGAGTGG 60.245 47.826 0.00 0.00 40.21 4.00
4210 6964 2.398754 TTCAGGAGACTTGGAGTGGA 57.601 50.000 0.00 0.00 40.21 4.02
4211 6965 2.398754 TCAGGAGACTTGGAGTGGAA 57.601 50.000 0.00 0.00 40.21 3.53
4212 6966 2.251818 TCAGGAGACTTGGAGTGGAAG 58.748 52.381 0.00 0.00 40.21 3.46
4213 6967 1.974236 CAGGAGACTTGGAGTGGAAGT 59.026 52.381 0.00 0.00 40.21 3.01
4214 6968 2.028567 CAGGAGACTTGGAGTGGAAGTC 60.029 54.545 0.00 0.00 46.58 3.01
4218 6972 2.772287 GACTTGGAGTGGAAGTCAAGG 58.228 52.381 0.00 0.00 45.84 3.61
4219 6973 2.368875 GACTTGGAGTGGAAGTCAAGGA 59.631 50.000 0.00 0.00 45.84 3.36
4220 6974 2.777692 ACTTGGAGTGGAAGTCAAGGAA 59.222 45.455 0.00 0.00 38.29 3.36
4221 6975 3.181450 ACTTGGAGTGGAAGTCAAGGAAG 60.181 47.826 0.00 0.00 38.29 3.46
4222 6976 1.072331 TGGAGTGGAAGTCAAGGAAGC 59.928 52.381 0.00 0.00 38.29 3.86
4223 6977 1.072331 GGAGTGGAAGTCAAGGAAGCA 59.928 52.381 0.00 0.00 38.29 3.91
4224 6978 2.487265 GGAGTGGAAGTCAAGGAAGCAA 60.487 50.000 0.00 0.00 38.29 3.91
4225 6979 2.550180 GAGTGGAAGTCAAGGAAGCAAC 59.450 50.000 0.00 0.00 35.94 4.17
4226 6980 1.264288 GTGGAAGTCAAGGAAGCAACG 59.736 52.381 0.00 0.00 0.00 4.10
4227 6981 1.140052 TGGAAGTCAAGGAAGCAACGA 59.860 47.619 0.00 0.00 0.00 3.85
4228 6982 1.801178 GGAAGTCAAGGAAGCAACGAG 59.199 52.381 0.00 0.00 0.00 4.18
4229 6983 1.801178 GAAGTCAAGGAAGCAACGAGG 59.199 52.381 0.00 0.00 0.00 4.63
4230 6984 0.603975 AGTCAAGGAAGCAACGAGGC 60.604 55.000 0.00 0.00 0.00 4.70
4231 6985 0.884704 GTCAAGGAAGCAACGAGGCA 60.885 55.000 5.91 0.00 35.83 4.75
4232 6986 0.603707 TCAAGGAAGCAACGAGGCAG 60.604 55.000 5.91 0.00 35.83 4.85
4233 6987 1.302832 AAGGAAGCAACGAGGCAGG 60.303 57.895 5.91 0.00 35.83 4.85
4234 6988 1.768684 AAGGAAGCAACGAGGCAGGA 61.769 55.000 5.91 0.00 35.83 3.86
4235 6989 1.743252 GGAAGCAACGAGGCAGGAG 60.743 63.158 5.91 0.00 35.83 3.69
4236 6990 1.743252 GAAGCAACGAGGCAGGAGG 60.743 63.158 5.91 0.00 35.83 4.30
4237 6991 3.259633 AAGCAACGAGGCAGGAGGG 62.260 63.158 5.91 0.00 35.83 4.30
4267 7021 3.006728 CCTTGTGGGCCCCTCGTA 61.007 66.667 22.27 0.00 0.00 3.43
4268 7022 2.584608 CTTGTGGGCCCCTCGTAG 59.415 66.667 22.27 10.07 0.00 3.51
4269 7023 3.682292 CTTGTGGGCCCCTCGTAGC 62.682 68.421 22.27 0.92 0.00 3.58
4270 7024 4.715130 TGTGGGCCCCTCGTAGCT 62.715 66.667 22.27 0.00 0.00 3.32
4271 7025 3.851128 GTGGGCCCCTCGTAGCTC 61.851 72.222 22.27 0.00 0.00 4.09
4274 7028 3.851128 GGCCCCTCGTAGCTCCAC 61.851 72.222 0.00 0.00 0.00 4.02
4275 7029 3.851128 GCCCCTCGTAGCTCCACC 61.851 72.222 0.00 0.00 0.00 4.61
4276 7030 3.528370 CCCCTCGTAGCTCCACCG 61.528 72.222 0.00 0.00 0.00 4.94
4277 7031 2.439701 CCCTCGTAGCTCCACCGA 60.440 66.667 0.00 0.00 0.00 4.69
4278 7032 2.772691 CCCTCGTAGCTCCACCGAC 61.773 68.421 0.00 0.00 0.00 4.79
4279 7033 2.772691 CCTCGTAGCTCCACCGACC 61.773 68.421 0.00 0.00 0.00 4.79
4280 7034 1.749638 CTCGTAGCTCCACCGACCT 60.750 63.158 0.00 0.00 0.00 3.85
4281 7035 0.463295 CTCGTAGCTCCACCGACCTA 60.463 60.000 0.00 0.00 0.00 3.08
4282 7036 0.745845 TCGTAGCTCCACCGACCTAC 60.746 60.000 0.00 0.00 0.00 3.18
4283 7037 0.747283 CGTAGCTCCACCGACCTACT 60.747 60.000 0.00 0.00 28.60 2.57
4284 7038 1.472188 GTAGCTCCACCGACCTACTT 58.528 55.000 0.00 0.00 28.37 2.24
4285 7039 1.404748 GTAGCTCCACCGACCTACTTC 59.595 57.143 0.00 0.00 28.37 3.01
4286 7040 0.039911 AGCTCCACCGACCTACTTCT 59.960 55.000 0.00 0.00 0.00 2.85
4287 7041 0.896226 GCTCCACCGACCTACTTCTT 59.104 55.000 0.00 0.00 0.00 2.52
4288 7042 1.275573 GCTCCACCGACCTACTTCTTT 59.724 52.381 0.00 0.00 0.00 2.52
4289 7043 2.674462 GCTCCACCGACCTACTTCTTTC 60.674 54.545 0.00 0.00 0.00 2.62
4290 7044 1.542915 TCCACCGACCTACTTCTTTCG 59.457 52.381 0.00 0.00 0.00 3.46
4291 7045 1.347320 CACCGACCTACTTCTTTCGC 58.653 55.000 0.00 0.00 0.00 4.70
4292 7046 0.245813 ACCGACCTACTTCTTTCGCC 59.754 55.000 0.00 0.00 0.00 5.54
4293 7047 0.531200 CCGACCTACTTCTTTCGCCT 59.469 55.000 0.00 0.00 0.00 5.52
4294 7048 1.747355 CCGACCTACTTCTTTCGCCTA 59.253 52.381 0.00 0.00 0.00 3.93
4295 7049 2.361438 CCGACCTACTTCTTTCGCCTAT 59.639 50.000 0.00 0.00 0.00 2.57
4296 7050 3.567164 CCGACCTACTTCTTTCGCCTATA 59.433 47.826 0.00 0.00 0.00 1.31
4297 7051 4.217983 CCGACCTACTTCTTTCGCCTATAT 59.782 45.833 0.00 0.00 0.00 0.86
4298 7052 5.413833 CCGACCTACTTCTTTCGCCTATATA 59.586 44.000 0.00 0.00 0.00 0.86
4299 7053 6.095160 CCGACCTACTTCTTTCGCCTATATAT 59.905 42.308 0.00 0.00 0.00 0.86
4300 7054 7.281774 CCGACCTACTTCTTTCGCCTATATATA 59.718 40.741 0.00 0.00 0.00 0.86
4301 7055 8.838365 CGACCTACTTCTTTCGCCTATATATAT 58.162 37.037 0.00 0.00 0.00 0.86
4313 7067 8.915057 TCGCCTATATATATACTCTTACACCC 57.085 38.462 0.00 0.00 0.00 4.61
4314 7068 8.721479 TCGCCTATATATATACTCTTACACCCT 58.279 37.037 0.00 0.00 0.00 4.34
4315 7069 8.784994 CGCCTATATATATACTCTTACACCCTG 58.215 40.741 0.00 0.00 0.00 4.45
4316 7070 9.863650 GCCTATATATATACTCTTACACCCTGA 57.136 37.037 0.00 0.00 0.00 3.86
4326 7080 9.838339 ATACTCTTACACCCTGAAAATATCAAG 57.162 33.333 0.00 0.00 37.67 3.02
4327 7081 7.112779 ACTCTTACACCCTGAAAATATCAAGG 58.887 38.462 0.00 0.00 44.13 3.61
4328 7082 6.423182 TCTTACACCCTGAAAATATCAAGGG 58.577 40.000 5.03 5.03 43.03 3.95
4329 7083 3.981212 ACACCCTGAAAATATCAAGGGG 58.019 45.455 11.17 5.08 46.92 4.79
4330 7084 3.299503 CACCCTGAAAATATCAAGGGGG 58.700 50.000 11.17 2.86 44.34 5.40
4344 7098 4.280019 GGGGGCCACGAAACCACT 62.280 66.667 4.39 0.00 0.00 4.00
4345 7099 2.203437 GGGGCCACGAAACCACTT 60.203 61.111 4.39 0.00 0.00 3.16
4346 7100 1.830847 GGGGCCACGAAACCACTTT 60.831 57.895 4.39 0.00 0.00 2.66
4347 7101 1.396607 GGGGCCACGAAACCACTTTT 61.397 55.000 4.39 0.00 0.00 2.27
4348 7102 0.031585 GGGCCACGAAACCACTTTTC 59.968 55.000 4.39 0.00 40.40 2.29
4349 7103 0.031585 GGCCACGAAACCACTTTTCC 59.968 55.000 0.00 0.00 40.67 3.13
4350 7104 0.741915 GCCACGAAACCACTTTTCCA 59.258 50.000 0.00 0.00 40.67 3.53
4351 7105 1.535226 GCCACGAAACCACTTTTCCAC 60.535 52.381 0.00 0.00 40.67 4.02
4352 7106 1.066454 CCACGAAACCACTTTTCCACC 59.934 52.381 0.00 0.00 40.67 4.61
4353 7107 1.018910 ACGAAACCACTTTTCCACCG 58.981 50.000 0.00 0.00 40.67 4.94
4354 7108 0.317519 CGAAACCACTTTTCCACCGC 60.318 55.000 0.00 0.00 40.67 5.68
4355 7109 0.031585 GAAACCACTTTTCCACCGCC 59.968 55.000 0.00 0.00 38.16 6.13
4356 7110 1.730451 AAACCACTTTTCCACCGCCG 61.730 55.000 0.00 0.00 0.00 6.46
4357 7111 4.038080 CCACTTTTCCACCGCCGC 62.038 66.667 0.00 0.00 0.00 6.53
4358 7112 3.283684 CACTTTTCCACCGCCGCA 61.284 61.111 0.00 0.00 0.00 5.69
4359 7113 2.517402 ACTTTTCCACCGCCGCAA 60.517 55.556 0.00 0.00 0.00 4.85
4360 7114 2.050442 CTTTTCCACCGCCGCAAC 60.050 61.111 0.00 0.00 0.00 4.17
4361 7115 3.551887 CTTTTCCACCGCCGCAACC 62.552 63.158 0.00 0.00 0.00 3.77
4362 7116 4.572571 TTTCCACCGCCGCAACCT 62.573 61.111 0.00 0.00 0.00 3.50
4363 7117 4.572571 TTCCACCGCCGCAACCTT 62.573 61.111 0.00 0.00 0.00 3.50
4366 7120 3.726517 CACCGCCGCAACCTTCTG 61.727 66.667 0.00 0.00 0.00 3.02
4367 7121 4.250305 ACCGCCGCAACCTTCTGT 62.250 61.111 0.00 0.00 0.00 3.41
4368 7122 2.047655 CCGCCGCAACCTTCTGTA 60.048 61.111 0.00 0.00 0.00 2.74
4369 7123 2.388232 CCGCCGCAACCTTCTGTAC 61.388 63.158 0.00 0.00 0.00 2.90
4370 7124 2.388232 CGCCGCAACCTTCTGTACC 61.388 63.158 0.00 0.00 0.00 3.34
4371 7125 2.038837 GCCGCAACCTTCTGTACCC 61.039 63.158 0.00 0.00 0.00 3.69
4372 7126 1.740296 CCGCAACCTTCTGTACCCG 60.740 63.158 0.00 0.00 0.00 5.28
4373 7127 1.005394 CGCAACCTTCTGTACCCGT 60.005 57.895 0.00 0.00 0.00 5.28
4374 7128 1.289109 CGCAACCTTCTGTACCCGTG 61.289 60.000 0.00 0.00 0.00 4.94
4375 7129 0.034337 GCAACCTTCTGTACCCGTGA 59.966 55.000 0.00 0.00 0.00 4.35
4376 7130 1.939838 GCAACCTTCTGTACCCGTGAG 60.940 57.143 0.00 0.00 0.00 3.51
4377 7131 1.616865 CAACCTTCTGTACCCGTGAGA 59.383 52.381 0.00 0.00 0.00 3.27
4378 7132 2.233305 ACCTTCTGTACCCGTGAGAT 57.767 50.000 0.00 0.00 0.00 2.75
4379 7133 2.100989 ACCTTCTGTACCCGTGAGATC 58.899 52.381 0.00 0.00 0.00 2.75
4380 7134 1.409427 CCTTCTGTACCCGTGAGATCC 59.591 57.143 0.00 0.00 0.00 3.36
4381 7135 1.409427 CTTCTGTACCCGTGAGATCCC 59.591 57.143 0.00 0.00 0.00 3.85
4382 7136 0.333652 TCTGTACCCGTGAGATCCCA 59.666 55.000 0.00 0.00 0.00 4.37
4383 7137 1.063190 TCTGTACCCGTGAGATCCCAT 60.063 52.381 0.00 0.00 0.00 4.00
4384 7138 1.341531 CTGTACCCGTGAGATCCCATC 59.658 57.143 0.00 0.00 0.00 3.51
4385 7139 1.063190 TGTACCCGTGAGATCCCATCT 60.063 52.381 0.00 0.00 43.70 2.90
4386 7140 2.040178 GTACCCGTGAGATCCCATCTT 58.960 52.381 0.00 0.00 40.38 2.40
4387 7141 0.833287 ACCCGTGAGATCCCATCTTG 59.167 55.000 0.00 0.00 40.38 3.02
4388 7142 0.107456 CCCGTGAGATCCCATCTTGG 59.893 60.000 0.00 0.00 40.38 3.61
4398 7152 2.595558 CCATCTTGGGGCCTTTTCC 58.404 57.895 0.84 0.00 32.67 3.13
4399 7153 1.322538 CCATCTTGGGGCCTTTTCCG 61.323 60.000 0.84 0.00 32.67 4.30
4400 7154 1.000359 ATCTTGGGGCCTTTTCCGG 60.000 57.895 0.84 0.00 0.00 5.14
4407 7161 3.102097 GCCTTTTCCGGCGATCTG 58.898 61.111 9.30 0.00 40.79 2.90
4408 7162 3.102097 CCTTTTCCGGCGATCTGC 58.898 61.111 9.30 1.55 45.38 4.26
4426 7180 3.870955 CGGAGGGGGATTCGATCA 58.129 61.111 0.00 0.00 0.00 2.92
4427 7181 1.367840 CGGAGGGGGATTCGATCAC 59.632 63.158 0.00 0.00 0.00 3.06
4428 7182 1.367840 GGAGGGGGATTCGATCACG 59.632 63.158 0.00 0.00 41.26 4.35
4429 7183 1.367840 GAGGGGGATTCGATCACGG 59.632 63.158 0.00 0.00 40.21 4.94
4430 7184 1.075525 AGGGGGATTCGATCACGGA 60.076 57.895 0.00 0.00 40.21 4.69
4431 7185 1.115930 AGGGGGATTCGATCACGGAG 61.116 60.000 0.00 0.00 40.21 4.63
4432 7186 1.367840 GGGGATTCGATCACGGAGG 59.632 63.158 0.00 0.00 40.21 4.30
4433 7187 1.367840 GGGATTCGATCACGGAGGG 59.632 63.158 0.00 0.00 40.21 4.30
4434 7188 1.301009 GGATTCGATCACGGAGGGC 60.301 63.158 0.00 0.00 40.21 5.19
4435 7189 1.742768 GATTCGATCACGGAGGGCT 59.257 57.895 0.00 0.00 40.21 5.19
4436 7190 0.105039 GATTCGATCACGGAGGGCTT 59.895 55.000 0.00 0.00 40.21 4.35
4437 7191 0.105039 ATTCGATCACGGAGGGCTTC 59.895 55.000 0.00 0.00 40.21 3.86
4438 7192 0.970937 TTCGATCACGGAGGGCTTCT 60.971 55.000 0.00 0.00 40.21 2.85
4439 7193 0.106868 TCGATCACGGAGGGCTTCTA 60.107 55.000 0.00 0.00 40.21 2.10
4440 7194 0.030908 CGATCACGGAGGGCTTCTAC 59.969 60.000 0.00 0.00 35.72 2.59
4441 7195 1.112113 GATCACGGAGGGCTTCTACA 58.888 55.000 0.00 0.00 0.00 2.74
4442 7196 1.689273 GATCACGGAGGGCTTCTACAT 59.311 52.381 0.00 0.00 0.00 2.29
4443 7197 1.112113 TCACGGAGGGCTTCTACATC 58.888 55.000 0.00 0.00 0.00 3.06
4444 7198 0.824109 CACGGAGGGCTTCTACATCA 59.176 55.000 0.00 0.00 0.00 3.07
4445 7199 1.207089 CACGGAGGGCTTCTACATCAA 59.793 52.381 0.00 0.00 0.00 2.57
4446 7200 1.207329 ACGGAGGGCTTCTACATCAAC 59.793 52.381 0.00 0.00 0.00 3.18
4447 7201 1.207089 CGGAGGGCTTCTACATCAACA 59.793 52.381 0.00 0.00 0.00 3.33
4448 7202 2.633488 GGAGGGCTTCTACATCAACAC 58.367 52.381 0.00 0.00 0.00 3.32
4449 7203 2.633488 GAGGGCTTCTACATCAACACC 58.367 52.381 0.00 0.00 0.00 4.16
4450 7204 1.985159 AGGGCTTCTACATCAACACCA 59.015 47.619 0.00 0.00 0.00 4.17
4451 7205 2.578021 AGGGCTTCTACATCAACACCAT 59.422 45.455 0.00 0.00 0.00 3.55
4452 7206 3.780294 AGGGCTTCTACATCAACACCATA 59.220 43.478 0.00 0.00 0.00 2.74
4453 7207 4.130118 GGGCTTCTACATCAACACCATAG 58.870 47.826 0.00 0.00 0.00 2.23
4454 7208 3.561725 GGCTTCTACATCAACACCATAGC 59.438 47.826 0.00 0.00 0.00 2.97
4455 7209 3.561725 GCTTCTACATCAACACCATAGCC 59.438 47.826 0.00 0.00 0.00 3.93
4456 7210 4.684485 GCTTCTACATCAACACCATAGCCT 60.684 45.833 0.00 0.00 0.00 4.58
4457 7211 4.672587 TCTACATCAACACCATAGCCTC 57.327 45.455 0.00 0.00 0.00 4.70
4458 7212 4.290093 TCTACATCAACACCATAGCCTCT 58.710 43.478 0.00 0.00 0.00 3.69
4459 7213 3.550437 ACATCAACACCATAGCCTCTC 57.450 47.619 0.00 0.00 0.00 3.20
4460 7214 2.171448 ACATCAACACCATAGCCTCTCC 59.829 50.000 0.00 0.00 0.00 3.71
4461 7215 0.824109 TCAACACCATAGCCTCTCCG 59.176 55.000 0.00 0.00 0.00 4.63
4462 7216 0.824109 CAACACCATAGCCTCTCCGA 59.176 55.000 0.00 0.00 0.00 4.55
4463 7217 1.414181 CAACACCATAGCCTCTCCGAT 59.586 52.381 0.00 0.00 0.00 4.18
4464 7218 1.043816 ACACCATAGCCTCTCCGATG 58.956 55.000 0.00 0.00 0.00 3.84
4465 7219 1.332195 CACCATAGCCTCTCCGATGA 58.668 55.000 0.00 0.00 0.00 2.92
4466 7220 1.898472 CACCATAGCCTCTCCGATGAT 59.102 52.381 0.00 0.00 0.00 2.45
4467 7221 3.092301 CACCATAGCCTCTCCGATGATA 58.908 50.000 0.00 0.00 0.00 2.15
4468 7222 3.703556 CACCATAGCCTCTCCGATGATAT 59.296 47.826 0.00 0.00 0.00 1.63
4469 7223 3.703556 ACCATAGCCTCTCCGATGATATG 59.296 47.826 0.00 0.00 30.43 1.78
4470 7224 3.703556 CCATAGCCTCTCCGATGATATGT 59.296 47.826 0.00 0.00 29.26 2.29
4471 7225 4.441217 CCATAGCCTCTCCGATGATATGTG 60.441 50.000 0.00 0.00 29.26 3.21
4472 7226 2.881734 AGCCTCTCCGATGATATGTGA 58.118 47.619 0.00 0.00 0.00 3.58
4473 7227 2.824936 AGCCTCTCCGATGATATGTGAG 59.175 50.000 0.00 0.00 0.00 3.51
4474 7228 2.560542 GCCTCTCCGATGATATGTGAGT 59.439 50.000 0.00 0.00 0.00 3.41
4475 7229 3.759086 GCCTCTCCGATGATATGTGAGTA 59.241 47.826 0.00 0.00 0.00 2.59
4476 7230 4.142491 GCCTCTCCGATGATATGTGAGTAG 60.142 50.000 0.00 0.00 0.00 2.57
4477 7231 5.007034 CCTCTCCGATGATATGTGAGTAGT 58.993 45.833 0.00 0.00 0.00 2.73
4478 7232 5.475220 CCTCTCCGATGATATGTGAGTAGTT 59.525 44.000 0.00 0.00 0.00 2.24
4479 7233 6.015856 CCTCTCCGATGATATGTGAGTAGTTT 60.016 42.308 0.00 0.00 0.00 2.66
4480 7234 7.175119 CCTCTCCGATGATATGTGAGTAGTTTA 59.825 40.741 0.00 0.00 0.00 2.01
4481 7235 7.872881 TCTCCGATGATATGTGAGTAGTTTAC 58.127 38.462 0.00 0.00 0.00 2.01
4482 7236 6.978338 TCCGATGATATGTGAGTAGTTTACC 58.022 40.000 0.00 0.00 0.00 2.85
4483 7237 6.548251 TCCGATGATATGTGAGTAGTTTACCA 59.452 38.462 0.00 0.00 0.00 3.25
4484 7238 6.641314 CCGATGATATGTGAGTAGTTTACCAC 59.359 42.308 0.00 0.00 33.39 4.16
4485 7239 7.200455 CGATGATATGTGAGTAGTTTACCACA 58.800 38.462 0.00 0.00 41.02 4.17
4486 7240 7.379797 CGATGATATGTGAGTAGTTTACCACAG 59.620 40.741 0.00 0.00 40.52 3.66
4487 7241 7.712204 TGATATGTGAGTAGTTTACCACAGA 57.288 36.000 0.00 0.00 40.52 3.41
4488 7242 7.544622 TGATATGTGAGTAGTTTACCACAGAC 58.455 38.462 0.00 0.00 40.52 3.51
4489 7243 4.595762 TGTGAGTAGTTTACCACAGACC 57.404 45.455 0.00 0.00 36.02 3.85
4490 7244 4.220724 TGTGAGTAGTTTACCACAGACCT 58.779 43.478 0.00 0.00 36.02 3.85
4491 7245 4.652421 TGTGAGTAGTTTACCACAGACCTT 59.348 41.667 0.00 0.00 36.02 3.50
4492 7246 5.221382 TGTGAGTAGTTTACCACAGACCTTC 60.221 44.000 0.00 0.00 36.02 3.46
4493 7247 4.022589 TGAGTAGTTTACCACAGACCTTCG 60.023 45.833 0.00 0.00 0.00 3.79
4494 7248 2.833631 AGTTTACCACAGACCTTCGG 57.166 50.000 0.00 0.00 0.00 4.30
4495 7249 1.346722 AGTTTACCACAGACCTTCGGG 59.653 52.381 0.00 0.00 41.87 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
419 426 0.031857 CATGAAACGTTGCAGCCCAA 59.968 50.000 15.55 0.00 0.00 4.12
460 467 9.760077 AAATCGTAACCCTAATGTATCACTTAG 57.240 33.333 0.00 0.00 0.00 2.18
664 675 1.054406 ACCCGACCCGAATGGATCAT 61.054 55.000 0.00 0.00 37.49 2.45
691 702 2.551459 GGCATAGCTCATACAAGCAAGG 59.449 50.000 0.00 0.00 45.00 3.61
694 705 2.546584 CGAGGCATAGCTCATACAAGCA 60.547 50.000 0.00 0.00 45.00 3.91
695 706 2.064762 CGAGGCATAGCTCATACAAGC 58.935 52.381 0.00 0.00 42.82 4.01
696 707 2.611473 CCCGAGGCATAGCTCATACAAG 60.611 54.545 0.00 0.00 0.00 3.16
697 708 1.344438 CCCGAGGCATAGCTCATACAA 59.656 52.381 0.00 0.00 0.00 2.41
698 709 0.969149 CCCGAGGCATAGCTCATACA 59.031 55.000 0.00 0.00 0.00 2.29
699 710 0.969894 ACCCGAGGCATAGCTCATAC 59.030 55.000 0.00 0.00 0.00 2.39
700 711 0.969149 CACCCGAGGCATAGCTCATA 59.031 55.000 0.00 0.00 0.00 2.15
701 712 0.760567 TCACCCGAGGCATAGCTCAT 60.761 55.000 0.00 0.00 0.00 2.90
702 713 1.381191 TCACCCGAGGCATAGCTCA 60.381 57.895 0.00 0.00 0.00 4.26
703 714 1.365633 CTCACCCGAGGCATAGCTC 59.634 63.158 0.00 0.00 35.44 4.09
704 715 2.801631 GCTCACCCGAGGCATAGCT 61.802 63.158 0.00 0.00 39.88 3.32
705 716 1.464376 TAGCTCACCCGAGGCATAGC 61.464 60.000 0.00 0.00 39.88 2.97
706 717 0.600557 CTAGCTCACCCGAGGCATAG 59.399 60.000 0.00 0.00 39.88 2.23
707 718 0.185175 TCTAGCTCACCCGAGGCATA 59.815 55.000 0.00 0.00 39.88 3.14
708 719 0.687757 TTCTAGCTCACCCGAGGCAT 60.688 55.000 0.00 0.00 39.88 4.40
709 720 0.687757 ATTCTAGCTCACCCGAGGCA 60.688 55.000 0.00 0.00 39.88 4.75
710 721 0.032815 GATTCTAGCTCACCCGAGGC 59.967 60.000 0.00 0.00 39.88 4.70
711 722 0.676736 GGATTCTAGCTCACCCGAGG 59.323 60.000 0.00 0.00 39.88 4.63
712 723 1.698506 AGGATTCTAGCTCACCCGAG 58.301 55.000 0.00 0.00 42.66 4.63
713 724 3.527507 ATAGGATTCTAGCTCACCCGA 57.472 47.619 0.00 0.00 0.00 5.14
714 725 3.862642 GCAATAGGATTCTAGCTCACCCG 60.863 52.174 0.00 0.00 0.00 5.28
715 726 3.558109 GGCAATAGGATTCTAGCTCACCC 60.558 52.174 0.00 0.00 0.00 4.61
716 727 3.326297 AGGCAATAGGATTCTAGCTCACC 59.674 47.826 0.00 0.00 0.00 4.02
717 728 4.314121 CAGGCAATAGGATTCTAGCTCAC 58.686 47.826 0.00 0.00 0.00 3.51
718 729 3.326006 CCAGGCAATAGGATTCTAGCTCA 59.674 47.826 0.00 0.00 0.00 4.26
719 730 3.867984 GCCAGGCAATAGGATTCTAGCTC 60.868 52.174 6.55 0.00 0.00 4.09
720 731 2.039613 GCCAGGCAATAGGATTCTAGCT 59.960 50.000 6.55 0.00 0.00 3.32
721 732 2.039613 AGCCAGGCAATAGGATTCTAGC 59.960 50.000 15.80 0.00 0.00 3.42
722 733 3.558746 CCAGCCAGGCAATAGGATTCTAG 60.559 52.174 15.80 0.00 0.00 2.43
723 734 2.373169 CCAGCCAGGCAATAGGATTCTA 59.627 50.000 15.80 0.00 0.00 2.10
724 735 1.144503 CCAGCCAGGCAATAGGATTCT 59.855 52.381 15.80 0.00 0.00 2.40
725 736 1.613836 CCAGCCAGGCAATAGGATTC 58.386 55.000 15.80 0.00 0.00 2.52
726 737 0.186873 CCCAGCCAGGCAATAGGATT 59.813 55.000 15.80 0.00 35.39 3.01
727 738 1.849116 CCCAGCCAGGCAATAGGAT 59.151 57.895 15.80 0.00 35.39 3.24
728 739 3.334604 CCCAGCCAGGCAATAGGA 58.665 61.111 15.80 0.00 35.39 2.94
736 747 1.669999 GCTAAACATGCCCAGCCAGG 61.670 60.000 0.00 0.00 37.03 4.45
737 748 0.682209 AGCTAAACATGCCCAGCCAG 60.682 55.000 8.85 0.00 34.49 4.85
738 749 0.623194 TAGCTAAACATGCCCAGCCA 59.377 50.000 8.85 0.00 34.49 4.75
739 750 1.134098 TCTAGCTAAACATGCCCAGCC 60.134 52.381 8.85 0.00 34.49 4.85
740 751 2.158900 TCTCTAGCTAAACATGCCCAGC 60.159 50.000 0.00 5.17 0.00 4.85
741 752 3.827008 TCTCTAGCTAAACATGCCCAG 57.173 47.619 0.00 0.00 0.00 4.45
742 753 3.370527 GGTTCTCTAGCTAAACATGCCCA 60.371 47.826 8.62 0.00 0.00 5.36
743 754 3.206964 GGTTCTCTAGCTAAACATGCCC 58.793 50.000 8.62 0.00 0.00 5.36
744 755 3.873910 TGGTTCTCTAGCTAAACATGCC 58.126 45.455 8.62 2.18 0.00 4.40
745 756 5.181245 TGTTTGGTTCTCTAGCTAAACATGC 59.819 40.000 8.62 0.00 33.99 4.06
746 757 6.204688 TGTGTTTGGTTCTCTAGCTAAACATG 59.795 38.462 9.64 0.00 37.47 3.21
747 758 6.204882 GTGTGTTTGGTTCTCTAGCTAAACAT 59.795 38.462 9.64 0.00 37.47 2.71
748 759 5.526111 GTGTGTTTGGTTCTCTAGCTAAACA 59.474 40.000 8.62 6.19 35.22 2.83
749 760 5.049612 GGTGTGTTTGGTTCTCTAGCTAAAC 60.050 44.000 0.00 0.00 0.00 2.01
750 761 5.061179 GGTGTGTTTGGTTCTCTAGCTAAA 58.939 41.667 0.00 0.00 0.00 1.85
751 762 4.504340 GGGTGTGTTTGGTTCTCTAGCTAA 60.504 45.833 0.00 0.00 0.00 3.09
752 763 3.007614 GGGTGTGTTTGGTTCTCTAGCTA 59.992 47.826 0.00 0.00 0.00 3.32
753 764 2.224548 GGGTGTGTTTGGTTCTCTAGCT 60.225 50.000 0.00 0.00 0.00 3.32
754 765 2.152016 GGGTGTGTTTGGTTCTCTAGC 58.848 52.381 0.00 0.00 0.00 3.42
755 766 2.036733 TCGGGTGTGTTTGGTTCTCTAG 59.963 50.000 0.00 0.00 0.00 2.43
756 767 2.040939 TCGGGTGTGTTTGGTTCTCTA 58.959 47.619 0.00 0.00 0.00 2.43
757 768 0.834612 TCGGGTGTGTTTGGTTCTCT 59.165 50.000 0.00 0.00 0.00 3.10
758 769 1.670791 TTCGGGTGTGTTTGGTTCTC 58.329 50.000 0.00 0.00 0.00 2.87
759 770 2.131776 TTTCGGGTGTGTTTGGTTCT 57.868 45.000 0.00 0.00 0.00 3.01
760 771 3.120041 CAATTTCGGGTGTGTTTGGTTC 58.880 45.455 0.00 0.00 0.00 3.62
761 772 2.740256 GCAATTTCGGGTGTGTTTGGTT 60.740 45.455 0.00 0.00 0.00 3.67
762 773 1.202475 GCAATTTCGGGTGTGTTTGGT 60.202 47.619 0.00 0.00 0.00 3.67
763 774 1.202463 TGCAATTTCGGGTGTGTTTGG 60.202 47.619 0.00 0.00 0.00 3.28
764 775 2.126467 CTGCAATTTCGGGTGTGTTTG 58.874 47.619 0.00 0.00 0.00 2.93
765 776 1.537990 GCTGCAATTTCGGGTGTGTTT 60.538 47.619 0.00 0.00 0.00 2.83
766 777 0.031994 GCTGCAATTTCGGGTGTGTT 59.968 50.000 0.00 0.00 0.00 3.32
767 778 1.659794 GCTGCAATTTCGGGTGTGT 59.340 52.632 0.00 0.00 0.00 3.72
768 779 1.442520 CGCTGCAATTTCGGGTGTG 60.443 57.895 0.00 0.00 0.00 3.82
769 780 1.896660 ACGCTGCAATTTCGGGTGT 60.897 52.632 0.00 0.00 0.00 4.16
770 781 1.442520 CACGCTGCAATTTCGGGTG 60.443 57.895 0.00 5.84 35.72 4.61
771 782 1.896660 ACACGCTGCAATTTCGGGT 60.897 52.632 0.00 0.29 34.73 5.28
772 783 1.442520 CACACGCTGCAATTTCGGG 60.443 57.895 0.00 0.00 0.00 5.14
773 784 1.442520 CCACACGCTGCAATTTCGG 60.443 57.895 0.00 0.00 0.00 4.30
774 785 1.442520 CCCACACGCTGCAATTTCG 60.443 57.895 0.00 0.00 0.00 3.46
820 831 3.390175 TTTTTCACCTCCCACCTCAAA 57.610 42.857 0.00 0.00 0.00 2.69
823 834 3.154827 TCATTTTTCACCTCCCACCTC 57.845 47.619 0.00 0.00 0.00 3.85
824 835 3.117131 ACTTCATTTTTCACCTCCCACCT 60.117 43.478 0.00 0.00 0.00 4.00
920 940 2.052690 GTGCTCTCCCTCTGGCGTA 61.053 63.158 0.00 0.00 0.00 4.42
925 965 1.218585 CTGCTGTGCTCTCCCTCTG 59.781 63.158 0.00 0.00 0.00 3.35
926 966 2.658064 GCTGCTGTGCTCTCCCTCT 61.658 63.158 0.00 0.00 0.00 3.69
928 968 3.715097 GGCTGCTGTGCTCTCCCT 61.715 66.667 0.00 0.00 0.00 4.20
929 969 3.265272 AAGGCTGCTGTGCTCTCCC 62.265 63.158 0.00 0.00 0.00 4.30
930 970 1.744741 GAAGGCTGCTGTGCTCTCC 60.745 63.158 0.00 0.00 0.00 3.71
931 971 1.744741 GGAAGGCTGCTGTGCTCTC 60.745 63.158 0.00 0.00 0.00 3.20
932 972 2.350514 GGAAGGCTGCTGTGCTCT 59.649 61.111 0.00 0.00 0.00 4.09
933 973 3.123620 CGGAAGGCTGCTGTGCTC 61.124 66.667 0.00 0.00 0.00 4.26
1313 1385 1.079127 CAAGGGGTGATCGTTCGCT 60.079 57.895 6.97 0.00 32.76 4.93
1333 1405 1.925415 TCGACGCGGGAATCGAAAGA 61.925 55.000 15.88 0.00 43.97 2.52
1353 1430 2.302260 CCTCCAAGCTCTACGAGATGA 58.698 52.381 0.00 0.00 0.00 2.92
1363 1440 2.552031 GATTTCCGTACCTCCAAGCTC 58.448 52.381 0.00 0.00 0.00 4.09
1364 1441 1.134788 CGATTTCCGTACCTCCAAGCT 60.135 52.381 0.00 0.00 0.00 3.74
1447 1541 4.757019 GTTTTCCCCACAAAACCCTAAA 57.243 40.909 0.00 0.00 39.43 1.85
1454 1548 2.176889 TCAACGGTTTTCCCCACAAAA 58.823 42.857 0.00 0.00 36.42 2.44
1479 1573 2.737252 GGATTCAAACTGTGGACTCGAC 59.263 50.000 0.00 0.00 0.00 4.20
1649 1779 8.968242 GGTCAAGAAAAATGTCTGTAAACAATC 58.032 33.333 0.00 0.00 31.81 2.67
1651 1781 7.973388 CAGGTCAAGAAAAATGTCTGTAAACAA 59.027 33.333 0.00 0.00 31.81 2.83
1655 1785 5.009610 GGCAGGTCAAGAAAAATGTCTGTAA 59.990 40.000 0.00 0.00 0.00 2.41
1656 1786 4.518970 GGCAGGTCAAGAAAAATGTCTGTA 59.481 41.667 0.00 0.00 0.00 2.74
1664 1794 2.037901 TGCATGGCAGGTCAAGAAAAA 58.962 42.857 0.00 0.00 33.32 1.94
1719 1850 5.182760 GCAAGACCACTCAGATCTCAAAATT 59.817 40.000 0.00 0.00 0.00 1.82
1739 1871 4.143263 GCAACTGAAATTTCCATTCGCAAG 60.143 41.667 15.48 6.11 0.00 4.01
1885 2017 8.383175 GGGATGATCAATTTATACCTTGACCTA 58.617 37.037 0.00 0.00 34.43 3.08
1908 2040 8.719596 TCTATAAGTACCAATTGCAATAAGGGA 58.280 33.333 25.89 19.28 0.00 4.20
1914 2046 8.574251 TGTGTTCTATAAGTACCAATTGCAAT 57.426 30.769 5.99 5.99 0.00 3.56
1940 2072 8.203485 AGGAAATTCAGTCAATCTCAGAGATAC 58.797 37.037 13.63 9.07 32.89 2.24
1964 2139 6.903815 AACATTTCGTTTATGCACCGCAGG 62.904 45.833 0.00 0.00 46.66 4.85
2018 2197 2.571653 TGGAACTCACCTCCAACATAGG 59.428 50.000 0.00 0.00 40.08 2.57
2205 2385 4.093998 CACTCAGGAGTCAAAATCCAATCG 59.906 45.833 0.00 0.00 40.20 3.34
2250 2430 2.158842 CCTCAGAAATCTCCTCCGCAAT 60.159 50.000 0.00 0.00 0.00 3.56
2302 2482 1.349026 CTGCTTCTCTGTTCCTTCCCA 59.651 52.381 0.00 0.00 0.00 4.37
2361 2541 3.929610 CCTTGATCTTCTTCGTTCTGGAC 59.070 47.826 0.00 0.00 0.00 4.02
2399 2579 3.053831 ACAATTACAAGACGGGGTGAG 57.946 47.619 0.00 0.00 0.00 3.51
2433 2616 7.559335 TGATGAACTGCCTATATGGATACTT 57.441 36.000 0.00 0.00 38.35 2.24
2443 2626 6.737720 TTCTACTCATGATGAACTGCCTAT 57.262 37.500 0.00 0.00 0.00 2.57
2446 2629 4.514441 CCATTCTACTCATGATGAACTGCC 59.486 45.833 0.00 0.00 0.00 4.85
2469 2660 9.606631 AATCAATCTCAGAGATAACAAAGTACC 57.393 33.333 13.63 0.00 32.89 3.34
2472 2663 7.609146 TGCAATCAATCTCAGAGATAACAAAGT 59.391 33.333 13.63 0.00 32.89 2.66
2537 2737 2.901192 TCTTGTCCTCGGAAACATACCA 59.099 45.455 0.00 0.00 0.00 3.25
2548 2748 0.807667 CGCCTCCAATCTTGTCCTCG 60.808 60.000 0.00 0.00 0.00 4.63
2577 2786 4.202050 CCACTGTTGTTTTCCTCTTCCTTG 60.202 45.833 0.00 0.00 0.00 3.61
2737 2948 0.964700 TCTCAGACACTCACCTGCAG 59.035 55.000 6.78 6.78 0.00 4.41
2934 3145 1.676529 GCATGCTGGTACGAGTAGAGA 59.323 52.381 11.37 0.00 0.00 3.10
2960 5633 8.600449 CAAATTTGCCTGTGAAAAGGTTAATA 57.400 30.769 5.01 0.00 39.75 0.98
2990 5668 6.437162 ACAGTGGCATTAGTTATTCAACCATT 59.563 34.615 0.00 0.00 35.05 3.16
3089 5790 3.250744 CGACCGAAACTACATGTGATGT 58.749 45.455 9.11 1.76 46.92 3.06
3106 5807 4.143179 GCGTACATTTTATAGCATCCGACC 60.143 45.833 0.00 0.00 0.00 4.79
3127 5830 1.061131 CTATGGAACTTGCTGAACGCG 59.939 52.381 3.53 3.53 43.27 6.01
3183 5892 9.936759 TTCCATTGTAATGATGCGATAACTATA 57.063 29.630 6.18 0.00 38.70 1.31
3184 5893 8.846943 TTCCATTGTAATGATGCGATAACTAT 57.153 30.769 6.18 0.00 38.70 2.12
3185 5894 8.846943 ATTCCATTGTAATGATGCGATAACTA 57.153 30.769 6.18 0.00 38.70 2.24
3211 5925 3.908382 GTCGTGTGCAGCTTCTAAAAATG 59.092 43.478 0.00 0.00 0.00 2.32
3298 6016 6.976934 AATGTTTTAAACAGAGGACATGGT 57.023 33.333 15.83 0.00 45.95 3.55
3535 6273 5.769484 TCTACAGAACTAAATCCTAGCGG 57.231 43.478 0.00 0.00 0.00 5.52
3536 6274 7.168302 CACATTCTACAGAACTAAATCCTAGCG 59.832 40.741 0.00 0.00 36.80 4.26
3537 6275 7.042389 GCACATTCTACAGAACTAAATCCTAGC 60.042 40.741 0.00 0.00 36.80 3.42
3538 6276 8.200792 AGCACATTCTACAGAACTAAATCCTAG 58.799 37.037 0.00 0.00 36.80 3.02
3541 6279 6.019479 CGAGCACATTCTACAGAACTAAATCC 60.019 42.308 0.00 0.00 36.80 3.01
3580 6318 6.089954 GCATCACTAAAATCAACAAAAGGCTC 59.910 38.462 0.00 0.00 0.00 4.70
3612 6350 7.962995 AGCTGCCACTAGAGCTAATATAATA 57.037 36.000 1.96 0.00 43.88 0.98
3643 6381 5.294552 AGCAAATCTGTTTCTAAGATACGCC 59.705 40.000 0.00 0.00 34.39 5.68
3661 6399 6.147164 CAGAAATTTCATGTTCTGCAGCAAAT 59.853 34.615 19.99 0.00 43.01 2.32
3682 6421 2.556144 ACAGATCAAGTGCAGCAGAA 57.444 45.000 0.00 0.00 0.00 3.02
3712 6451 7.667219 AGACCTTCAAGTTCACATAAACATCAT 59.333 33.333 0.00 0.00 0.00 2.45
3729 6470 9.475620 TCAATACTAATCAGACTAGACCTTCAA 57.524 33.333 0.00 0.00 0.00 2.69
3736 6477 9.415008 AGAAGCTTCAATACTAATCAGACTAGA 57.585 33.333 27.57 0.00 0.00 2.43
3757 6498 4.154375 GCTAGTAAGTTGTTTCCCAGAAGC 59.846 45.833 0.00 0.00 0.00 3.86
3782 6529 5.689383 TGAACAACCAATAACTCTTGCTC 57.311 39.130 0.00 0.00 0.00 4.26
3788 6535 8.324163 ACAGAGTAATGAACAACCAATAACTC 57.676 34.615 0.00 0.00 0.00 3.01
3861 6608 4.123497 TGACTACCTGGTCAAATCATCG 57.877 45.455 0.63 0.00 42.35 3.84
3919 6668 2.547211 CTCCTTGTGCAGACTTTGACTG 59.453 50.000 0.00 0.00 38.27 3.51
3952 6702 1.004918 GAGTGTGTGGGAAGGACGG 60.005 63.158 0.00 0.00 0.00 4.79
3998 6748 5.514274 TGAAGTTCAGGCCAAAACTAAAG 57.486 39.130 19.58 0.00 34.71 1.85
4003 6753 1.408702 TGCTGAAGTTCAGGCCAAAAC 59.591 47.619 29.45 14.32 44.43 2.43
4007 6757 1.055849 TAGTGCTGAAGTTCAGGCCA 58.944 50.000 29.45 18.98 44.43 5.36
4019 6769 3.126514 CAGAATGAGCCTGTTTAGTGCTG 59.873 47.826 0.00 0.00 39.69 4.41
4050 6800 7.158021 CCTGAGAAACTCCCATATGAATAGTC 58.842 42.308 3.65 0.00 0.00 2.59
4059 6809 6.884472 TTTATCACCTGAGAAACTCCCATA 57.116 37.500 0.00 0.00 31.20 2.74
4060 6810 5.779241 TTTATCACCTGAGAAACTCCCAT 57.221 39.130 0.00 0.00 31.20 4.00
4062 6812 5.561679 AGTTTTATCACCTGAGAAACTCCC 58.438 41.667 11.17 0.00 38.69 4.30
4073 6823 7.713942 GTCAATATCGGGTTAGTTTTATCACCT 59.286 37.037 0.00 0.00 0.00 4.00
4086 6836 2.432874 TCCATGTCGTCAATATCGGGTT 59.567 45.455 0.00 0.00 0.00 4.11
4089 6839 4.749598 TCATTTCCATGTCGTCAATATCGG 59.250 41.667 0.00 0.00 0.00 4.18
4090 6840 5.610338 CGTCATTTCCATGTCGTCAATATCG 60.610 44.000 0.00 0.00 37.23 2.92
4091 6841 5.670097 CGTCATTTCCATGTCGTCAATATC 58.330 41.667 0.00 0.00 37.23 1.63
4099 6853 2.065512 TGACACGTCATTTCCATGTCG 58.934 47.619 0.00 1.18 44.52 4.35
4103 6857 3.417069 TTCCTGACACGTCATTTCCAT 57.583 42.857 0.00 0.00 39.13 3.41
4115 6869 5.414454 CCGTTTGATATTCCTTTTCCTGACA 59.586 40.000 0.00 0.00 0.00 3.58
4116 6870 5.646360 TCCGTTTGATATTCCTTTTCCTGAC 59.354 40.000 0.00 0.00 0.00 3.51
4117 6871 5.811190 TCCGTTTGATATTCCTTTTCCTGA 58.189 37.500 0.00 0.00 0.00 3.86
4118 6872 6.509418 TTCCGTTTGATATTCCTTTTCCTG 57.491 37.500 0.00 0.00 0.00 3.86
4119 6873 6.321435 GGATTCCGTTTGATATTCCTTTTCCT 59.679 38.462 0.00 0.00 0.00 3.36
4120 6874 6.096282 TGGATTCCGTTTGATATTCCTTTTCC 59.904 38.462 0.00 0.00 0.00 3.13
4121 6875 7.095695 TGGATTCCGTTTGATATTCCTTTTC 57.904 36.000 0.00 0.00 0.00 2.29
4122 6876 7.475137 TTGGATTCCGTTTGATATTCCTTTT 57.525 32.000 0.00 0.00 0.00 2.27
4123 6877 7.475137 TTTGGATTCCGTTTGATATTCCTTT 57.525 32.000 0.00 0.00 0.00 3.11
4124 6878 7.417797 CCATTTGGATTCCGTTTGATATTCCTT 60.418 37.037 0.00 0.00 37.39 3.36
4125 6879 6.040842 CCATTTGGATTCCGTTTGATATTCCT 59.959 38.462 0.00 0.00 37.39 3.36
4126 6880 6.040391 TCCATTTGGATTCCGTTTGATATTCC 59.960 38.462 0.00 0.00 39.78 3.01
4127 6881 7.038154 TCCATTTGGATTCCGTTTGATATTC 57.962 36.000 0.00 0.00 39.78 1.75
4128 6882 7.264947 GTTCCATTTGGATTCCGTTTGATATT 58.735 34.615 0.00 0.00 44.98 1.28
4129 6883 6.459573 CGTTCCATTTGGATTCCGTTTGATAT 60.460 38.462 0.00 0.00 44.98 1.63
4130 6884 5.163703 CGTTCCATTTGGATTCCGTTTGATA 60.164 40.000 0.00 0.00 44.98 2.15
4131 6885 4.380444 CGTTCCATTTGGATTCCGTTTGAT 60.380 41.667 0.00 0.00 44.98 2.57
4132 6886 3.057876 CGTTCCATTTGGATTCCGTTTGA 60.058 43.478 0.00 0.00 44.98 2.69
4133 6887 3.057876 TCGTTCCATTTGGATTCCGTTTG 60.058 43.478 0.00 0.00 44.98 2.93
4134 6888 3.150767 TCGTTCCATTTGGATTCCGTTT 58.849 40.909 0.00 0.00 44.98 3.60
4135 6889 2.785562 TCGTTCCATTTGGATTCCGTT 58.214 42.857 0.00 0.00 44.98 4.44
4136 6890 2.483014 TCGTTCCATTTGGATTCCGT 57.517 45.000 0.00 0.00 44.98 4.69
4137 6891 3.498082 GTTTCGTTCCATTTGGATTCCG 58.502 45.455 0.00 4.14 44.98 4.30
4138 6892 3.509967 AGGTTTCGTTCCATTTGGATTCC 59.490 43.478 0.00 0.00 44.98 3.01
4139 6893 4.783764 AGGTTTCGTTCCATTTGGATTC 57.216 40.909 0.00 0.00 44.98 2.52
4140 6894 5.134202 GAAGGTTTCGTTCCATTTGGATT 57.866 39.130 0.00 0.00 44.98 3.01
4141 6895 4.783764 GAAGGTTTCGTTCCATTTGGAT 57.216 40.909 0.00 0.00 44.98 3.41
4154 6908 2.011540 AAGATCTCCGCGAAGGTTTC 57.988 50.000 8.23 0.00 41.99 2.78
4155 6909 2.474410 AAAGATCTCCGCGAAGGTTT 57.526 45.000 8.23 0.00 41.99 3.27
4156 6910 2.474410 AAAAGATCTCCGCGAAGGTT 57.526 45.000 8.23 0.00 41.99 3.50
4157 6911 2.474410 AAAAAGATCTCCGCGAAGGT 57.526 45.000 8.23 0.00 41.99 3.50
4173 6927 7.875041 TCTCCTGAATTGTGTTTGTTTCAAAAA 59.125 29.630 0.00 0.00 0.00 1.94
4174 6928 7.330700 GTCTCCTGAATTGTGTTTGTTTCAAAA 59.669 33.333 0.00 0.00 0.00 2.44
4175 6929 6.811170 GTCTCCTGAATTGTGTTTGTTTCAAA 59.189 34.615 0.00 0.00 0.00 2.69
4176 6930 6.152661 AGTCTCCTGAATTGTGTTTGTTTCAA 59.847 34.615 0.00 0.00 0.00 2.69
4177 6931 5.652014 AGTCTCCTGAATTGTGTTTGTTTCA 59.348 36.000 0.00 0.00 0.00 2.69
4178 6932 6.136541 AGTCTCCTGAATTGTGTTTGTTTC 57.863 37.500 0.00 0.00 0.00 2.78
4179 6933 6.332630 CAAGTCTCCTGAATTGTGTTTGTTT 58.667 36.000 0.00 0.00 41.61 2.83
4180 6934 5.163519 CCAAGTCTCCTGAATTGTGTTTGTT 60.164 40.000 5.69 0.00 44.04 2.83
4181 6935 4.339247 CCAAGTCTCCTGAATTGTGTTTGT 59.661 41.667 5.69 0.00 44.04 2.83
4182 6936 4.580167 TCCAAGTCTCCTGAATTGTGTTTG 59.420 41.667 5.69 0.00 44.04 2.93
4183 6937 4.792068 TCCAAGTCTCCTGAATTGTGTTT 58.208 39.130 5.69 0.00 44.04 2.83
4184 6938 4.141390 ACTCCAAGTCTCCTGAATTGTGTT 60.141 41.667 5.69 0.00 44.04 3.32
4185 6939 3.392616 ACTCCAAGTCTCCTGAATTGTGT 59.607 43.478 5.69 2.37 44.04 3.72
4186 6940 3.750130 CACTCCAAGTCTCCTGAATTGTG 59.250 47.826 5.69 0.00 44.04 3.33
4187 6941 3.244700 CCACTCCAAGTCTCCTGAATTGT 60.245 47.826 5.69 0.00 44.04 2.71
4188 6942 3.008375 TCCACTCCAAGTCTCCTGAATTG 59.992 47.826 0.00 0.00 44.82 2.32
4189 6943 3.251484 TCCACTCCAAGTCTCCTGAATT 58.749 45.455 0.00 0.00 0.00 2.17
4190 6944 2.907892 TCCACTCCAAGTCTCCTGAAT 58.092 47.619 0.00 0.00 0.00 2.57
4191 6945 2.398754 TCCACTCCAAGTCTCCTGAA 57.601 50.000 0.00 0.00 0.00 3.02
4192 6946 2.251818 CTTCCACTCCAAGTCTCCTGA 58.748 52.381 0.00 0.00 0.00 3.86
4193 6947 1.974236 ACTTCCACTCCAAGTCTCCTG 59.026 52.381 0.00 0.00 27.00 3.86
4194 6948 2.252714 GACTTCCACTCCAAGTCTCCT 58.747 52.381 5.50 0.00 44.38 3.69
4195 6949 1.971357 TGACTTCCACTCCAAGTCTCC 59.029 52.381 12.50 0.00 46.81 3.71
4196 6950 3.556004 CCTTGACTTCCACTCCAAGTCTC 60.556 52.174 12.50 0.00 46.81 3.36
4197 6951 2.370189 CCTTGACTTCCACTCCAAGTCT 59.630 50.000 12.50 0.00 46.81 3.24
4198 6952 2.368875 TCCTTGACTTCCACTCCAAGTC 59.631 50.000 5.75 5.75 46.85 3.01
4199 6953 2.408565 TCCTTGACTTCCACTCCAAGT 58.591 47.619 0.00 0.00 36.77 3.16
4200 6954 3.406764 CTTCCTTGACTTCCACTCCAAG 58.593 50.000 0.00 0.00 36.64 3.61
4201 6955 2.487265 GCTTCCTTGACTTCCACTCCAA 60.487 50.000 0.00 0.00 0.00 3.53
4202 6956 1.072331 GCTTCCTTGACTTCCACTCCA 59.928 52.381 0.00 0.00 0.00 3.86
4203 6957 1.072331 TGCTTCCTTGACTTCCACTCC 59.928 52.381 0.00 0.00 0.00 3.85
4204 6958 2.550180 GTTGCTTCCTTGACTTCCACTC 59.450 50.000 0.00 0.00 0.00 3.51
4205 6959 2.576615 GTTGCTTCCTTGACTTCCACT 58.423 47.619 0.00 0.00 0.00 4.00
4206 6960 1.264288 CGTTGCTTCCTTGACTTCCAC 59.736 52.381 0.00 0.00 0.00 4.02
4207 6961 1.140052 TCGTTGCTTCCTTGACTTCCA 59.860 47.619 0.00 0.00 0.00 3.53
4208 6962 1.801178 CTCGTTGCTTCCTTGACTTCC 59.199 52.381 0.00 0.00 0.00 3.46
4209 6963 1.801178 CCTCGTTGCTTCCTTGACTTC 59.199 52.381 0.00 0.00 0.00 3.01
4210 6964 1.884235 CCTCGTTGCTTCCTTGACTT 58.116 50.000 0.00 0.00 0.00 3.01
4211 6965 0.603975 GCCTCGTTGCTTCCTTGACT 60.604 55.000 0.00 0.00 0.00 3.41
4212 6966 0.884704 TGCCTCGTTGCTTCCTTGAC 60.885 55.000 1.05 0.00 0.00 3.18
4213 6967 0.603707 CTGCCTCGTTGCTTCCTTGA 60.604 55.000 1.05 0.00 0.00 3.02
4214 6968 1.580845 CCTGCCTCGTTGCTTCCTTG 61.581 60.000 1.05 0.00 0.00 3.61
4215 6969 1.302832 CCTGCCTCGTTGCTTCCTT 60.303 57.895 1.05 0.00 0.00 3.36
4216 6970 2.177594 CTCCTGCCTCGTTGCTTCCT 62.178 60.000 1.05 0.00 0.00 3.36
4217 6971 1.743252 CTCCTGCCTCGTTGCTTCC 60.743 63.158 1.05 0.00 0.00 3.46
4218 6972 1.743252 CCTCCTGCCTCGTTGCTTC 60.743 63.158 1.05 0.00 0.00 3.86
4219 6973 2.348998 CCTCCTGCCTCGTTGCTT 59.651 61.111 1.05 0.00 0.00 3.91
4220 6974 3.710722 CCCTCCTGCCTCGTTGCT 61.711 66.667 1.05 0.00 0.00 3.91
4250 7004 3.006728 TACGAGGGGCCCACAAGG 61.007 66.667 27.72 8.68 39.47 3.61
4251 7005 2.584608 CTACGAGGGGCCCACAAG 59.415 66.667 27.72 14.90 0.00 3.16
4252 7006 3.712907 GCTACGAGGGGCCCACAA 61.713 66.667 27.72 8.68 0.00 3.33
4253 7007 4.715130 AGCTACGAGGGGCCCACA 62.715 66.667 27.72 2.03 0.00 4.17
4254 7008 3.851128 GAGCTACGAGGGGCCCAC 61.851 72.222 27.72 19.04 0.00 4.61
4257 7011 3.851128 GTGGAGCTACGAGGGGCC 61.851 72.222 0.00 0.00 0.00 5.80
4258 7012 3.851128 GGTGGAGCTACGAGGGGC 61.851 72.222 0.00 0.00 0.00 5.80
4259 7013 3.528370 CGGTGGAGCTACGAGGGG 61.528 72.222 0.00 0.00 0.00 4.79
4260 7014 2.439701 TCGGTGGAGCTACGAGGG 60.440 66.667 0.00 0.00 32.29 4.30
4261 7015 2.772691 GGTCGGTGGAGCTACGAGG 61.773 68.421 0.00 0.00 37.30 4.63
4262 7016 2.799371 GGTCGGTGGAGCTACGAG 59.201 66.667 0.00 0.00 37.30 4.18
4268 7022 0.896226 AAGAAGTAGGTCGGTGGAGC 59.104 55.000 0.00 0.00 40.99 4.70
4269 7023 2.415625 CGAAAGAAGTAGGTCGGTGGAG 60.416 54.545 0.00 0.00 0.00 3.86
4270 7024 1.542915 CGAAAGAAGTAGGTCGGTGGA 59.457 52.381 0.00 0.00 0.00 4.02
4271 7025 1.992170 CGAAAGAAGTAGGTCGGTGG 58.008 55.000 0.00 0.00 0.00 4.61
4272 7026 1.347320 GCGAAAGAAGTAGGTCGGTG 58.653 55.000 0.00 0.00 34.13 4.94
4273 7027 0.245813 GGCGAAAGAAGTAGGTCGGT 59.754 55.000 0.00 0.00 34.13 4.69
4274 7028 0.531200 AGGCGAAAGAAGTAGGTCGG 59.469 55.000 0.00 0.00 34.13 4.79
4275 7029 3.712091 ATAGGCGAAAGAAGTAGGTCG 57.288 47.619 0.00 0.00 36.59 4.79
4287 7041 9.347240 GGGTGTAAGAGTATATATATAGGCGAA 57.653 37.037 2.53 0.00 0.00 4.70
4288 7042 8.721479 AGGGTGTAAGAGTATATATATAGGCGA 58.279 37.037 2.53 0.00 0.00 5.54
4289 7043 8.784994 CAGGGTGTAAGAGTATATATATAGGCG 58.215 40.741 2.53 0.00 0.00 5.52
4290 7044 9.863650 TCAGGGTGTAAGAGTATATATATAGGC 57.136 37.037 2.53 0.00 0.00 3.93
4300 7054 9.838339 CTTGATATTTTCAGGGTGTAAGAGTAT 57.162 33.333 0.00 0.00 35.27 2.12
4301 7055 8.265055 CCTTGATATTTTCAGGGTGTAAGAGTA 58.735 37.037 0.00 0.00 44.59 2.59
4302 7056 7.112779 CCTTGATATTTTCAGGGTGTAAGAGT 58.887 38.462 0.00 0.00 44.59 3.24
4303 7057 7.559590 CCTTGATATTTTCAGGGTGTAAGAG 57.440 40.000 0.00 0.00 44.59 2.85
4327 7081 3.802852 AAGTGGTTTCGTGGCCCCC 62.803 63.158 0.00 0.00 0.00 5.40
4328 7082 1.396607 AAAAGTGGTTTCGTGGCCCC 61.397 55.000 0.00 0.00 0.00 5.80
4329 7083 0.031585 GAAAAGTGGTTTCGTGGCCC 59.968 55.000 0.00 0.00 36.52 5.80
4330 7084 0.031585 GGAAAAGTGGTTTCGTGGCC 59.968 55.000 0.00 0.00 45.74 5.36
4331 7085 0.741915 TGGAAAAGTGGTTTCGTGGC 59.258 50.000 0.00 0.00 45.74 5.01
4332 7086 1.066454 GGTGGAAAAGTGGTTTCGTGG 59.934 52.381 0.00 0.00 45.74 4.94
4333 7087 1.268335 CGGTGGAAAAGTGGTTTCGTG 60.268 52.381 0.00 0.00 45.74 4.35
4334 7088 1.018910 CGGTGGAAAAGTGGTTTCGT 58.981 50.000 0.00 0.00 45.74 3.85
4335 7089 0.317519 GCGGTGGAAAAGTGGTTTCG 60.318 55.000 0.00 0.00 45.74 3.46
4336 7090 0.031585 GGCGGTGGAAAAGTGGTTTC 59.968 55.000 0.00 0.00 44.31 2.78
4337 7091 1.730451 CGGCGGTGGAAAAGTGGTTT 61.730 55.000 0.00 0.00 0.00 3.27
4338 7092 2.190841 CGGCGGTGGAAAAGTGGTT 61.191 57.895 0.00 0.00 0.00 3.67
4339 7093 2.593436 CGGCGGTGGAAAAGTGGT 60.593 61.111 0.00 0.00 0.00 4.16
4340 7094 4.038080 GCGGCGGTGGAAAAGTGG 62.038 66.667 9.78 0.00 0.00 4.00
4341 7095 2.840066 TTGCGGCGGTGGAAAAGTG 61.840 57.895 9.78 0.00 0.00 3.16
4342 7096 2.517402 TTGCGGCGGTGGAAAAGT 60.517 55.556 9.78 0.00 0.00 2.66
4343 7097 2.050442 GTTGCGGCGGTGGAAAAG 60.050 61.111 9.78 0.00 0.00 2.27
4344 7098 3.597728 GGTTGCGGCGGTGGAAAA 61.598 61.111 9.78 0.00 0.00 2.29
4345 7099 4.572571 AGGTTGCGGCGGTGGAAA 62.573 61.111 9.78 0.00 0.00 3.13
4346 7100 4.572571 AAGGTTGCGGCGGTGGAA 62.573 61.111 9.78 0.00 0.00 3.53
4349 7103 3.726517 CAGAAGGTTGCGGCGGTG 61.727 66.667 9.78 0.00 0.00 4.94
4350 7104 2.874664 TACAGAAGGTTGCGGCGGT 61.875 57.895 9.78 0.00 0.00 5.68
4351 7105 2.047655 TACAGAAGGTTGCGGCGG 60.048 61.111 9.78 0.00 0.00 6.13
4352 7106 2.388232 GGTACAGAAGGTTGCGGCG 61.388 63.158 0.51 0.51 0.00 6.46
4353 7107 2.038837 GGGTACAGAAGGTTGCGGC 61.039 63.158 0.00 0.00 0.00 6.53
4354 7108 1.740296 CGGGTACAGAAGGTTGCGG 60.740 63.158 0.00 0.00 0.00 5.69
4355 7109 1.005394 ACGGGTACAGAAGGTTGCG 60.005 57.895 0.00 0.00 0.00 4.85
4356 7110 0.034337 TCACGGGTACAGAAGGTTGC 59.966 55.000 0.00 0.00 0.00 4.17
4357 7111 1.616865 TCTCACGGGTACAGAAGGTTG 59.383 52.381 0.00 0.00 0.00 3.77
4358 7112 2.005370 TCTCACGGGTACAGAAGGTT 57.995 50.000 0.00 0.00 0.00 3.50
4359 7113 2.100989 GATCTCACGGGTACAGAAGGT 58.899 52.381 0.00 0.00 0.00 3.50
4360 7114 1.409427 GGATCTCACGGGTACAGAAGG 59.591 57.143 0.00 0.00 0.00 3.46
4361 7115 1.409427 GGGATCTCACGGGTACAGAAG 59.591 57.143 0.00 0.00 0.00 2.85
4362 7116 1.272816 TGGGATCTCACGGGTACAGAA 60.273 52.381 0.00 0.00 0.00 3.02
4363 7117 0.333652 TGGGATCTCACGGGTACAGA 59.666 55.000 0.00 0.00 0.00 3.41
4364 7118 1.341531 GATGGGATCTCACGGGTACAG 59.658 57.143 0.00 0.00 0.00 2.74
4365 7119 1.063190 AGATGGGATCTCACGGGTACA 60.063 52.381 0.00 0.00 33.42 2.90
4366 7120 1.705873 AGATGGGATCTCACGGGTAC 58.294 55.000 0.00 0.00 33.42 3.34
4367 7121 2.039418 CAAGATGGGATCTCACGGGTA 58.961 52.381 0.00 0.00 39.08 3.69
4368 7122 0.833287 CAAGATGGGATCTCACGGGT 59.167 55.000 0.00 0.00 39.08 5.28
4369 7123 0.107456 CCAAGATGGGATCTCACGGG 59.893 60.000 0.00 0.00 39.08 5.28
4370 7124 3.694364 CCAAGATGGGATCTCACGG 57.306 57.895 0.00 0.00 39.08 4.94
4380 7134 1.322538 CGGAAAAGGCCCCAAGATGG 61.323 60.000 0.00 0.00 37.25 3.51
4381 7135 1.322538 CCGGAAAAGGCCCCAAGATG 61.323 60.000 0.00 0.00 0.00 2.90
4382 7136 1.000359 CCGGAAAAGGCCCCAAGAT 60.000 57.895 0.00 0.00 0.00 2.40
4383 7137 2.438795 CCGGAAAAGGCCCCAAGA 59.561 61.111 0.00 0.00 0.00 3.02
4391 7145 3.102097 GCAGATCGCCGGAAAAGG 58.898 61.111 5.05 0.00 32.94 3.11
4402 7156 2.118233 GAATCCCCCTCCGGCAGATC 62.118 65.000 0.00 0.00 0.00 2.75
4403 7157 2.039405 AATCCCCCTCCGGCAGAT 60.039 61.111 0.00 0.00 0.00 2.90
4404 7158 2.768344 GAATCCCCCTCCGGCAGA 60.768 66.667 0.00 0.00 0.00 4.26
4405 7159 4.241555 CGAATCCCCCTCCGGCAG 62.242 72.222 0.00 0.00 0.00 4.85
4406 7160 4.789173 TCGAATCCCCCTCCGGCA 62.789 66.667 0.00 0.00 0.00 5.69
4407 7161 3.241515 GATCGAATCCCCCTCCGGC 62.242 68.421 0.00 0.00 0.00 6.13
4408 7162 1.837051 TGATCGAATCCCCCTCCGG 60.837 63.158 0.00 0.00 0.00 5.14
4409 7163 1.367840 GTGATCGAATCCCCCTCCG 59.632 63.158 0.00 0.00 0.00 4.63
4410 7164 1.367840 CGTGATCGAATCCCCCTCC 59.632 63.158 0.00 0.00 39.71 4.30
4411 7165 1.113517 TCCGTGATCGAATCCCCCTC 61.114 60.000 0.00 0.00 39.71 4.30
4412 7166 1.075525 TCCGTGATCGAATCCCCCT 60.076 57.895 0.00 0.00 39.71 4.79
4413 7167 1.367840 CTCCGTGATCGAATCCCCC 59.632 63.158 0.00 0.00 39.71 5.40
4414 7168 1.367840 CCTCCGTGATCGAATCCCC 59.632 63.158 0.00 0.00 39.71 4.81
4415 7169 1.367840 CCCTCCGTGATCGAATCCC 59.632 63.158 0.00 0.00 39.71 3.85
4416 7170 1.301009 GCCCTCCGTGATCGAATCC 60.301 63.158 0.00 0.00 39.71 3.01
4417 7171 0.105039 AAGCCCTCCGTGATCGAATC 59.895 55.000 0.00 0.00 39.71 2.52
4418 7172 0.105039 GAAGCCCTCCGTGATCGAAT 59.895 55.000 0.00 0.00 39.71 3.34
4419 7173 0.970937 AGAAGCCCTCCGTGATCGAA 60.971 55.000 0.00 0.00 39.71 3.71
4420 7174 0.106868 TAGAAGCCCTCCGTGATCGA 60.107 55.000 0.00 0.00 39.71 3.59
4421 7175 0.030908 GTAGAAGCCCTCCGTGATCG 59.969 60.000 0.00 0.00 0.00 3.69
4422 7176 1.112113 TGTAGAAGCCCTCCGTGATC 58.888 55.000 0.00 0.00 0.00 2.92
4423 7177 1.689273 GATGTAGAAGCCCTCCGTGAT 59.311 52.381 0.00 0.00 0.00 3.06
4424 7178 1.112113 GATGTAGAAGCCCTCCGTGA 58.888 55.000 0.00 0.00 0.00 4.35
4425 7179 0.824109 TGATGTAGAAGCCCTCCGTG 59.176 55.000 0.00 0.00 0.00 4.94
4426 7180 1.207329 GTTGATGTAGAAGCCCTCCGT 59.793 52.381 0.00 0.00 0.00 4.69
4427 7181 1.207089 TGTTGATGTAGAAGCCCTCCG 59.793 52.381 0.00 0.00 0.00 4.63
4428 7182 2.633488 GTGTTGATGTAGAAGCCCTCC 58.367 52.381 0.00 0.00 0.00 4.30
4429 7183 2.027192 TGGTGTTGATGTAGAAGCCCTC 60.027 50.000 0.00 0.00 0.00 4.30
4430 7184 1.985159 TGGTGTTGATGTAGAAGCCCT 59.015 47.619 0.00 0.00 0.00 5.19
4431 7185 2.489938 TGGTGTTGATGTAGAAGCCC 57.510 50.000 0.00 0.00 0.00 5.19
4432 7186 3.561725 GCTATGGTGTTGATGTAGAAGCC 59.438 47.826 0.00 0.00 0.00 4.35
4433 7187 3.561725 GGCTATGGTGTTGATGTAGAAGC 59.438 47.826 0.00 0.00 0.00 3.86
4434 7188 5.028549 AGGCTATGGTGTTGATGTAGAAG 57.971 43.478 0.00 0.00 0.00 2.85
4435 7189 4.716784 AGAGGCTATGGTGTTGATGTAGAA 59.283 41.667 0.00 0.00 0.00 2.10
4436 7190 4.290093 AGAGGCTATGGTGTTGATGTAGA 58.710 43.478 0.00 0.00 0.00 2.59
4437 7191 4.502259 GGAGAGGCTATGGTGTTGATGTAG 60.502 50.000 0.00 0.00 0.00 2.74
4438 7192 3.388024 GGAGAGGCTATGGTGTTGATGTA 59.612 47.826 0.00 0.00 0.00 2.29
4439 7193 2.171448 GGAGAGGCTATGGTGTTGATGT 59.829 50.000 0.00 0.00 0.00 3.06
4440 7194 2.804572 CGGAGAGGCTATGGTGTTGATG 60.805 54.545 0.00 0.00 0.00 3.07
4441 7195 1.414181 CGGAGAGGCTATGGTGTTGAT 59.586 52.381 0.00 0.00 0.00 2.57
4442 7196 0.824109 CGGAGAGGCTATGGTGTTGA 59.176 55.000 0.00 0.00 0.00 3.18
4443 7197 0.824109 TCGGAGAGGCTATGGTGTTG 59.176 55.000 0.00 0.00 0.00 3.33
4444 7198 1.414181 CATCGGAGAGGCTATGGTGTT 59.586 52.381 0.00 0.00 43.63 3.32
4445 7199 1.043816 CATCGGAGAGGCTATGGTGT 58.956 55.000 0.00 0.00 43.63 4.16
4446 7200 1.332195 TCATCGGAGAGGCTATGGTG 58.668 55.000 0.00 0.00 43.63 4.17
4447 7201 2.317371 ATCATCGGAGAGGCTATGGT 57.683 50.000 0.00 0.00 43.63 3.55
4448 7202 4.319139 CATATCATCGGAGAGGCTATGG 57.681 50.000 0.00 0.00 41.69 2.74
4450 7204 4.604156 TCACATATCATCGGAGAGGCTAT 58.396 43.478 0.00 0.00 43.63 2.97
4451 7205 4.013050 CTCACATATCATCGGAGAGGCTA 58.987 47.826 0.00 0.00 43.63 3.93
4452 7206 2.824936 CTCACATATCATCGGAGAGGCT 59.175 50.000 0.00 0.00 43.63 4.58
4453 7207 2.560542 ACTCACATATCATCGGAGAGGC 59.439 50.000 0.00 0.00 43.63 4.70
4454 7208 5.007034 ACTACTCACATATCATCGGAGAGG 58.993 45.833 0.00 0.00 43.63 3.69
4455 7209 6.567687 AACTACTCACATATCATCGGAGAG 57.432 41.667 0.00 0.00 43.63 3.20
4456 7210 6.961360 AAACTACTCACATATCATCGGAGA 57.039 37.500 0.00 0.00 45.75 3.71
4457 7211 7.085116 GGTAAACTACTCACATATCATCGGAG 58.915 42.308 0.00 0.00 0.00 4.63
4458 7212 6.548251 TGGTAAACTACTCACATATCATCGGA 59.452 38.462 0.00 0.00 0.00 4.55
4459 7213 6.641314 GTGGTAAACTACTCACATATCATCGG 59.359 42.308 0.00 0.00 33.17 4.18
4460 7214 7.200455 TGTGGTAAACTACTCACATATCATCG 58.800 38.462 0.00 0.00 36.02 3.84
4461 7215 8.414003 TCTGTGGTAAACTACTCACATATCATC 58.586 37.037 0.00 0.00 38.36 2.92
4462 7216 8.198109 GTCTGTGGTAAACTACTCACATATCAT 58.802 37.037 0.00 0.00 38.36 2.45
4463 7217 7.363530 GGTCTGTGGTAAACTACTCACATATCA 60.364 40.741 0.00 0.00 38.36 2.15
4464 7218 6.979238 GGTCTGTGGTAAACTACTCACATATC 59.021 42.308 0.00 0.00 38.36 1.63
4465 7219 6.668283 AGGTCTGTGGTAAACTACTCACATAT 59.332 38.462 0.00 0.00 38.36 1.78
4466 7220 6.014647 AGGTCTGTGGTAAACTACTCACATA 58.985 40.000 0.00 0.00 38.36 2.29
4467 7221 4.838986 AGGTCTGTGGTAAACTACTCACAT 59.161 41.667 0.00 0.00 38.36 3.21
4468 7222 4.220724 AGGTCTGTGGTAAACTACTCACA 58.779 43.478 0.00 0.00 37.45 3.58
4469 7223 4.868314 AGGTCTGTGGTAAACTACTCAC 57.132 45.455 0.00 0.00 33.39 3.51
4470 7224 4.022589 CGAAGGTCTGTGGTAAACTACTCA 60.023 45.833 0.00 0.00 0.00 3.41
4471 7225 4.483311 CGAAGGTCTGTGGTAAACTACTC 58.517 47.826 0.00 0.00 0.00 2.59
4472 7226 4.516365 CGAAGGTCTGTGGTAAACTACT 57.484 45.455 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.