Multiple sequence alignment - TraesCS3D01G071000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G071000 chr3D 100.000 5079 0 0 1 5079 31807369 31802291 0.000000e+00 9380.0
1 TraesCS3D01G071000 chr3D 92.312 1691 83 14 3073 4759 31965089 31966736 0.000000e+00 2359.0
2 TraesCS3D01G071000 chr3D 87.868 544 35 20 2049 2577 31964286 31964813 1.210000e-170 610.0
3 TraesCS3D01G071000 chr3D 82.229 619 77 18 4130 4734 348149332 348149931 2.110000e-138 503.0
4 TraesCS3D01G071000 chr3D 94.044 319 19 0 4761 5079 1661408 1661726 7.650000e-133 484.0
5 TraesCS3D01G071000 chr3D 85.194 412 30 13 1359 1750 31963682 31964082 1.330000e-105 394.0
6 TraesCS3D01G071000 chr3D 82.151 437 42 12 88 499 31962903 31963328 4.870000e-90 342.0
7 TraesCS3D01G071000 chr3D 98.844 173 2 0 2664 2836 31964912 31965084 4.940000e-80 309.0
8 TraesCS3D01G071000 chr3D 92.019 213 17 0 921 1133 31963411 31963623 2.970000e-77 300.0
9 TraesCS3D01G071000 chr3D 95.808 167 3 3 1796 1960 31964096 31964260 3.010000e-67 267.0
10 TraesCS3D01G071000 chr3D 90.643 171 15 1 2698 2868 31848713 31848544 5.120000e-55 226.0
11 TraesCS3D01G071000 chr3D 90.299 134 8 3 4021 4149 31848531 31848398 2.430000e-38 171.0
12 TraesCS3D01G071000 chr3D 80.508 236 28 6 433 650 31963176 31963411 1.130000e-36 165.0
13 TraesCS3D01G071000 chr3D 100.000 39 0 0 1316 1354 31963619 31963657 7.050000e-09 73.1
14 TraesCS3D01G071000 chr3B 91.720 2198 123 20 390 2550 54328371 54326196 0.000000e+00 2996.0
15 TraesCS3D01G071000 chr3B 92.941 1445 82 8 2698 4139 54503536 54502109 0.000000e+00 2085.0
16 TraesCS3D01G071000 chr3B 91.435 1436 98 17 2816 4245 53961720 53960304 0.000000e+00 1947.0
17 TraesCS3D01G071000 chr3B 91.255 972 60 5 264 1216 53964149 53963184 0.000000e+00 1301.0
18 TraesCS3D01G071000 chr3B 90.637 769 49 8 432 1184 54506014 54505253 0.000000e+00 1000.0
19 TraesCS3D01G071000 chr3B 89.879 662 62 5 3548 4207 54316438 54315780 0.000000e+00 846.0
20 TraesCS3D01G071000 chr3B 91.969 523 29 9 4229 4738 53959571 53959049 0.000000e+00 721.0
21 TraesCS3D01G071000 chr3B 88.581 578 45 12 1359 1932 54504814 54504254 0.000000e+00 682.0
22 TraesCS3D01G071000 chr3B 84.507 710 51 23 1971 2669 54504270 54503609 0.000000e+00 647.0
23 TraesCS3D01G071000 chr3B 86.789 492 38 10 4262 4739 54315777 54315299 1.620000e-144 523.0
24 TraesCS3D01G071000 chr3B 94.671 319 17 0 4761 5079 4706977 4707295 3.530000e-136 496.0
25 TraesCS3D01G071000 chr3B 82.447 564 60 18 2116 2669 53962589 53962055 1.670000e-124 457.0
26 TraesCS3D01G071000 chr3B 88.235 357 35 4 2730 3081 54325925 54325571 2.190000e-113 420.0
27 TraesCS3D01G071000 chr3B 94.510 255 14 0 3185 3439 54325564 54325310 1.330000e-105 394.0
28 TraesCS3D01G071000 chr3B 79.861 576 67 24 4171 4734 447973854 447974392 4.800000e-100 375.0
29 TraesCS3D01G071000 chr3B 81.641 463 42 14 89 514 54328661 54328205 1.350000e-90 344.0
30 TraesCS3D01G071000 chr3B 91.139 158 14 0 390 547 53964071 53963914 1.110000e-51 215.0
31 TraesCS3D01G071000 chr3B 95.312 128 6 0 3425 3552 54325292 54325165 2.400000e-48 204.0
32 TraesCS3D01G071000 chr3B 88.608 158 11 1 2667 2817 53962001 53961844 8.680000e-43 185.0
33 TraesCS3D01G071000 chr3B 85.906 149 7 5 1221 1368 54504998 54504863 4.100000e-31 147.0
34 TraesCS3D01G071000 chr2A 88.982 1915 159 39 2299 4196 528106212 528108091 0.000000e+00 2320.0
35 TraesCS3D01G071000 chr2A 87.659 1256 94 33 143 1368 528104084 528105308 0.000000e+00 1404.0
36 TraesCS3D01G071000 chr2A 91.795 585 43 5 1356 1936 528105354 528105937 0.000000e+00 809.0
37 TraesCS3D01G071000 chr2A 94.533 439 21 2 4324 4759 528108086 528108524 0.000000e+00 675.0
38 TraesCS3D01G071000 chr2A 97.531 81 1 1 88 168 528104002 528104081 2.470000e-28 137.0
39 TraesCS3D01G071000 chr2A 91.026 78 4 1 2010 2087 528105943 528106017 9.000000e-18 102.0
40 TraesCS3D01G071000 chr4A 86.900 542 64 3 364 899 515589237 515588697 7.280000e-168 601.0
41 TraesCS3D01G071000 chr4A 91.324 438 38 0 96 533 515589547 515589110 2.620000e-167 599.0
42 TraesCS3D01G071000 chr2B 85.983 585 49 20 2102 2669 227310766 227311334 3.390000e-166 595.0
43 TraesCS3D01G071000 chr2B 82.785 395 49 12 1566 1955 227310295 227310675 8.150000e-88 335.0
44 TraesCS3D01G071000 chr2B 90.306 196 16 2 3622 3817 227311890 227312082 2.350000e-63 254.0
45 TraesCS3D01G071000 chr7B 94.984 319 16 0 4761 5079 80068401 80068719 7.590000e-138 501.0
46 TraesCS3D01G071000 chrUn 94.671 319 17 0 4761 5079 257168582 257168264 3.530000e-136 496.0
47 TraesCS3D01G071000 chr7D 94.671 319 17 0 4761 5079 629978306 629977988 3.530000e-136 496.0
48 TraesCS3D01G071000 chr5D 94.671 319 17 0 4761 5079 559649035 559648717 3.530000e-136 496.0
49 TraesCS3D01G071000 chr3A 94.357 319 18 0 4761 5079 712382724 712382406 1.640000e-134 490.0
50 TraesCS3D01G071000 chr3A 81.481 621 79 18 4130 4734 467095837 467096437 1.280000e-130 477.0
51 TraesCS3D01G071000 chr7A 94.340 318 18 0 4761 5078 37924381 37924698 5.910000e-134 488.0
52 TraesCS3D01G071000 chr6A 94.044 319 19 0 4761 5079 17909839 17909521 7.650000e-133 484.0
53 TraesCS3D01G071000 chr4B 84.804 204 31 0 879 1082 1791241 1791444 6.670000e-49 206.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G071000 chr3D 31802291 31807369 5078 True 9380.000000 9380 100.000000 1 5079 1 chr3D.!!$R1 5078
1 TraesCS3D01G071000 chr3D 31962903 31966736 3833 False 535.455556 2359 90.522667 88 4759 9 chr3D.!!$F3 4671
2 TraesCS3D01G071000 chr3D 348149332 348149931 599 False 503.000000 503 82.229000 4130 4734 1 chr3D.!!$F2 604
3 TraesCS3D01G071000 chr3B 54502109 54506014 3905 True 912.200000 2085 88.514400 432 4139 5 chr3B.!!$R4 3707
4 TraesCS3D01G071000 chr3B 54325165 54328661 3496 True 871.600000 2996 90.283600 89 3552 5 chr3B.!!$R3 3463
5 TraesCS3D01G071000 chr3B 53959049 53964149 5100 True 804.333333 1947 89.475500 264 4738 6 chr3B.!!$R1 4474
6 TraesCS3D01G071000 chr3B 54315299 54316438 1139 True 684.500000 846 88.334000 3548 4739 2 chr3B.!!$R2 1191
7 TraesCS3D01G071000 chr3B 447973854 447974392 538 False 375.000000 375 79.861000 4171 4734 1 chr3B.!!$F2 563
8 TraesCS3D01G071000 chr2A 528104002 528108524 4522 False 907.833333 2320 91.921000 88 4759 6 chr2A.!!$F1 4671
9 TraesCS3D01G071000 chr4A 515588697 515589547 850 True 600.000000 601 89.112000 96 899 2 chr4A.!!$R1 803
10 TraesCS3D01G071000 chr2B 227310295 227312082 1787 False 394.666667 595 86.358000 1566 3817 3 chr2B.!!$F1 2251
11 TraesCS3D01G071000 chr3A 467095837 467096437 600 False 477.000000 477 81.481000 4130 4734 1 chr3A.!!$F1 604

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
82 83 0.916086 ACTTGGTGAACACTCCCACA 59.084 50.0 4.96 0.0 35.13 4.17 F
1044 1200 0.338120 AGCTGGAGAAGGTAGGCTCT 59.662 55.0 0.00 0.0 33.90 4.09 F
1787 2330 0.324645 ATCCGGCTGGGCTTGAAATT 60.325 50.0 12.87 0.0 35.24 1.82 F
3582 4523 0.109919 GAAAATCCTTTTCGCGCCGT 60.110 50.0 0.00 0.0 39.56 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1444 1983 0.467290 TTTCACGCCCTTTTCAGCCT 60.467 50.000 0.00 0.0 0.0 4.58 R
2918 3811 0.179000 ATCTCCCAACTCCGATGTGC 59.821 55.000 0.00 0.0 0.0 4.57 R
3780 4722 1.202627 GCAATTGTCCAAAAGCACCCA 60.203 47.619 7.40 0.0 0.0 4.51 R
4861 6571 0.032813 TTCTTAGGACGGATCGGGGT 60.033 55.000 5.18 0.0 0.0 4.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.438183 ACTACACGGACTCCCTTATTGT 58.562 45.455 0.00 0.00 0.00 2.71
22 23 3.446516 ACTACACGGACTCCCTTATTGTC 59.553 47.826 0.00 0.00 0.00 3.18
23 24 2.253610 ACACGGACTCCCTTATTGTCA 58.746 47.619 0.00 0.00 32.84 3.58
24 25 2.233922 ACACGGACTCCCTTATTGTCAG 59.766 50.000 0.00 0.00 32.84 3.51
25 26 2.496070 CACGGACTCCCTTATTGTCAGA 59.504 50.000 0.00 0.00 32.84 3.27
26 27 2.496470 ACGGACTCCCTTATTGTCAGAC 59.504 50.000 0.00 0.00 32.84 3.51
27 28 2.496070 CGGACTCCCTTATTGTCAGACA 59.504 50.000 0.00 0.00 32.84 3.41
28 29 3.429547 CGGACTCCCTTATTGTCAGACAG 60.430 52.174 2.82 0.00 32.84 3.51
29 30 3.515901 GGACTCCCTTATTGTCAGACAGT 59.484 47.826 2.82 3.31 32.84 3.55
30 31 4.710375 GGACTCCCTTATTGTCAGACAGTA 59.290 45.833 2.82 2.21 32.84 2.74
31 32 5.394333 GGACTCCCTTATTGTCAGACAGTAC 60.394 48.000 5.30 0.00 32.84 2.73
32 33 5.084519 ACTCCCTTATTGTCAGACAGTACA 58.915 41.667 5.30 0.00 0.00 2.90
33 34 5.542635 ACTCCCTTATTGTCAGACAGTACAA 59.457 40.000 5.30 0.00 39.73 2.41
34 35 5.790593 TCCCTTATTGTCAGACAGTACAAC 58.209 41.667 5.30 0.00 38.35 3.32
35 36 4.935808 CCCTTATTGTCAGACAGTACAACC 59.064 45.833 5.30 0.00 38.35 3.77
36 37 4.625742 CCTTATTGTCAGACAGTACAACCG 59.374 45.833 5.30 0.00 38.35 4.44
37 38 3.746045 ATTGTCAGACAGTACAACCGT 57.254 42.857 2.82 0.00 38.35 4.83
38 39 4.859304 ATTGTCAGACAGTACAACCGTA 57.141 40.909 2.82 0.00 38.35 4.02
55 56 4.585955 CCGTACAGGTGCTATCAGTATT 57.414 45.455 0.00 0.00 34.51 1.89
56 57 4.299155 CCGTACAGGTGCTATCAGTATTG 58.701 47.826 0.00 0.00 34.51 1.90
57 58 3.736252 CGTACAGGTGCTATCAGTATTGC 59.264 47.826 0.00 0.00 34.83 3.56
58 59 3.912496 ACAGGTGCTATCAGTATTGCA 57.088 42.857 0.00 0.00 40.77 4.08
65 66 5.027293 TGCTATCAGTATTGCACATGACT 57.973 39.130 0.00 0.00 38.64 3.41
66 67 5.430886 TGCTATCAGTATTGCACATGACTT 58.569 37.500 0.00 0.00 38.64 3.01
67 68 5.295045 TGCTATCAGTATTGCACATGACTTG 59.705 40.000 0.00 0.00 38.64 3.16
68 69 5.277683 GCTATCAGTATTGCACATGACTTGG 60.278 44.000 0.00 0.00 34.46 3.61
69 70 4.019792 TCAGTATTGCACATGACTTGGT 57.980 40.909 0.00 0.00 0.00 3.67
70 71 3.752747 TCAGTATTGCACATGACTTGGTG 59.247 43.478 0.00 0.00 38.05 4.17
71 72 3.752747 CAGTATTGCACATGACTTGGTGA 59.247 43.478 0.00 0.00 37.18 4.02
72 73 4.216042 CAGTATTGCACATGACTTGGTGAA 59.784 41.667 0.00 0.00 37.18 3.18
73 74 3.648339 ATTGCACATGACTTGGTGAAC 57.352 42.857 0.00 0.00 37.18 3.18
74 75 2.049888 TGCACATGACTTGGTGAACA 57.950 45.000 0.00 0.00 37.18 3.18
75 76 1.675483 TGCACATGACTTGGTGAACAC 59.325 47.619 0.00 0.00 37.18 3.32
76 77 1.949525 GCACATGACTTGGTGAACACT 59.050 47.619 0.00 0.00 37.18 3.55
77 78 2.031682 GCACATGACTTGGTGAACACTC 60.032 50.000 0.00 0.00 37.18 3.51
78 79 2.549754 CACATGACTTGGTGAACACTCC 59.450 50.000 0.00 0.00 37.18 3.85
79 80 2.154462 CATGACTTGGTGAACACTCCC 58.846 52.381 4.96 0.00 0.00 4.30
80 81 1.208706 TGACTTGGTGAACACTCCCA 58.791 50.000 4.96 0.00 0.00 4.37
81 82 1.134220 TGACTTGGTGAACACTCCCAC 60.134 52.381 4.96 0.00 0.00 4.61
82 83 0.916086 ACTTGGTGAACACTCCCACA 59.084 50.000 4.96 0.00 35.13 4.17
83 84 1.283613 ACTTGGTGAACACTCCCACAA 59.716 47.619 4.96 0.36 35.13 3.33
84 85 1.949525 CTTGGTGAACACTCCCACAAG 59.050 52.381 4.96 5.89 35.13 3.16
85 86 0.916086 TGGTGAACACTCCCACAAGT 59.084 50.000 4.96 0.00 35.13 3.16
193 222 5.621228 GCGCTGAATTTAATAAACCATCGAG 59.379 40.000 0.00 4.90 0.00 4.04
235 299 5.054477 TGTAGTACTCCAGAAAGTGCAAAC 58.946 41.667 0.00 0.00 34.67 2.93
352 443 3.204119 CGCCATCGCCATGAGCAA 61.204 61.111 0.00 0.00 44.04 3.91
614 756 1.003233 GCTCCACCACCACTTCCTC 60.003 63.158 0.00 0.00 0.00 3.71
677 819 2.291043 GGTGAAGAGGGCCGAGGAA 61.291 63.158 0.00 0.00 0.00 3.36
822 976 2.501723 ACTCCATAGATTGGTCGTGCTT 59.498 45.455 0.00 0.00 46.52 3.91
847 1001 8.923609 TTGAGCTCGATAATGATCTGATTATC 57.076 34.615 9.64 12.61 40.05 1.75
895 1051 2.403561 ACCTTCCAGAGCTAAGGATCC 58.596 52.381 18.03 2.48 44.27 3.36
960 1116 1.863325 AGCAGAATCAGAGGCTCAGA 58.137 50.000 18.26 15.17 28.71 3.27
975 1131 2.091112 CAGAGCTGAACTGGACGCG 61.091 63.158 3.53 3.53 0.00 6.01
1044 1200 0.338120 AGCTGGAGAAGGTAGGCTCT 59.662 55.000 0.00 0.00 33.90 4.09
1047 1207 2.183679 CTGGAGAAGGTAGGCTCTTGT 58.816 52.381 0.00 0.00 0.00 3.16
1067 1227 6.931281 TCTTGTCATTTCTTACCTGAACTCTG 59.069 38.462 0.00 0.00 0.00 3.35
1216 1585 1.005097 TGAGTGAGGCCTGAATTGCAT 59.995 47.619 12.00 0.00 0.00 3.96
1217 1586 2.097825 GAGTGAGGCCTGAATTGCATT 58.902 47.619 12.00 0.00 0.00 3.56
1219 1588 2.494870 AGTGAGGCCTGAATTGCATTTC 59.505 45.455 12.00 13.23 0.00 2.17
1251 1653 6.748132 TGAAGTGAGCATCGACATCATATAA 58.252 36.000 0.00 0.00 38.61 0.98
1277 1681 4.038042 CCACAGAGACAGTAACTTGTGAGA 59.962 45.833 4.16 0.00 0.00 3.27
1278 1682 5.218885 CACAGAGACAGTAACTTGTGAGAG 58.781 45.833 0.00 0.00 0.00 3.20
1280 1684 3.057876 AGAGACAGTAACTTGTGAGAGCG 60.058 47.826 0.00 0.00 0.00 5.03
1391 1911 4.492247 CGTTTTGCAAATGAACACCAACAG 60.492 41.667 13.65 0.00 0.00 3.16
1444 1983 3.402110 ACATTGTCGAATGCTCAAGTCA 58.598 40.909 0.00 0.00 42.54 3.41
1580 2120 4.095185 GCTTACAACCAACACAACACAGTA 59.905 41.667 0.00 0.00 0.00 2.74
1705 2246 5.334105 CCTCAACTTCATAGTGTCGTTTTGG 60.334 44.000 0.00 0.00 34.01 3.28
1787 2330 0.324645 ATCCGGCTGGGCTTGAAATT 60.325 50.000 12.87 0.00 35.24 1.82
1788 2331 0.329931 TCCGGCTGGGCTTGAAATTA 59.670 50.000 12.87 0.00 35.24 1.40
1792 2335 3.556004 CCGGCTGGGCTTGAAATTAAAAA 60.556 43.478 2.57 0.00 0.00 1.94
2279 2865 4.569943 TCTCCAACTTGACATAGTCTTGC 58.430 43.478 0.00 0.00 33.15 4.01
2309 2919 6.732896 TTATTGTTTTAGGGTGCTTTGGAA 57.267 33.333 0.00 0.00 0.00 3.53
2444 3055 9.391006 ACATGTTTACTTTCAGTTTTCAGAGTA 57.609 29.630 0.00 0.00 0.00 2.59
2478 3089 7.732025 TCACCTCAACTTTAGAGTGTCATTTA 58.268 34.615 0.00 0.00 35.91 1.40
2479 3090 8.208224 TCACCTCAACTTTAGAGTGTCATTTAA 58.792 33.333 0.00 0.00 35.91 1.52
2498 3109 9.173021 TCATTTAAAATATGAACACCGATGTCT 57.827 29.630 0.00 0.00 38.45 3.41
2642 3261 3.003480 GAGTGTACTTGCCCTGCTTTAG 58.997 50.000 0.00 0.00 0.00 1.85
2851 3739 0.908910 ACTCCACCGCAATATGACCA 59.091 50.000 0.00 0.00 0.00 4.02
2868 3757 5.199024 TGACCATGTTCATGTCCTTTTTG 57.801 39.130 11.13 0.00 0.00 2.44
2897 3790 3.450904 AGCAGAACTCCCCTACACATAA 58.549 45.455 0.00 0.00 0.00 1.90
2910 3803 4.522789 CCTACACATAAACAGGGTGCTTTT 59.477 41.667 0.00 0.00 36.00 2.27
2913 3806 4.588528 ACACATAAACAGGGTGCTTTTGAT 59.411 37.500 0.00 0.00 36.00 2.57
2914 3807 4.925054 CACATAAACAGGGTGCTTTTGATG 59.075 41.667 0.00 0.00 0.00 3.07
2918 3811 2.233271 ACAGGGTGCTTTTGATGTCAG 58.767 47.619 0.00 0.00 0.00 3.51
3005 3898 6.066054 CCACAAGGTTTCTTCTTCTCTTTC 57.934 41.667 0.00 0.00 0.00 2.62
3006 3899 5.277538 CCACAAGGTTTCTTCTTCTCTTTCG 60.278 44.000 0.00 0.00 0.00 3.46
3030 3923 5.543507 AGGACAATCGATAAGCTCATCTT 57.456 39.130 0.00 0.00 38.79 2.40
3062 3956 0.907486 AGTAGCTCCATCAAGCAGCA 59.093 50.000 0.00 0.00 45.00 4.41
3063 3957 1.280133 AGTAGCTCCATCAAGCAGCAA 59.720 47.619 0.00 0.00 45.00 3.91
3064 3958 1.399791 GTAGCTCCATCAAGCAGCAAC 59.600 52.381 0.00 0.00 45.00 4.17
3066 3960 1.798735 CTCCATCAAGCAGCAACCG 59.201 57.895 0.00 0.00 0.00 4.44
3070 3964 0.806868 CATCAAGCAGCAACCGATGT 59.193 50.000 0.00 0.00 31.02 3.06
3071 3965 2.009051 CATCAAGCAGCAACCGATGTA 58.991 47.619 0.00 0.00 31.02 2.29
3251 4145 4.854399 TCAACGTCTTTTTGCAGTAATGG 58.146 39.130 0.00 0.00 0.00 3.16
3459 4389 7.389607 GGAGTTACATTGTTGCTAGAGGTTTTA 59.610 37.037 0.00 0.00 0.00 1.52
3460 4390 8.685838 AGTTACATTGTTGCTAGAGGTTTTAA 57.314 30.769 0.00 0.00 0.00 1.52
3511 4441 3.826524 TGTGCAGGGTTTTGAGAACATA 58.173 40.909 0.00 0.00 0.00 2.29
3526 4457 2.185663 ACATACCGATTAGTGGGGGT 57.814 50.000 0.00 0.00 36.57 4.95
3581 4522 2.637155 GAAAATCCTTTTCGCGCCG 58.363 52.632 0.00 0.00 39.56 6.46
3582 4523 0.109919 GAAAATCCTTTTCGCGCCGT 60.110 50.000 0.00 0.00 39.56 5.68
3653 4594 1.112113 GGTCTCGTATTGGCAGGAGA 58.888 55.000 5.80 5.80 37.17 3.71
3688 4629 3.316071 TCATGGCGTCCGTTTACTAAA 57.684 42.857 0.00 0.00 0.00 1.85
3744 4685 4.646040 CCAATTTCCCTACAGCATTCATGA 59.354 41.667 0.00 0.00 0.00 3.07
3885 4827 1.179152 TGCAATGCAGTGAAGGATGG 58.821 50.000 20.00 0.00 33.32 3.51
3911 4853 5.744666 GAGAGAGCTCAACGAGTATAGTT 57.255 43.478 17.77 0.00 40.96 2.24
3952 4894 0.250513 ATGAGGTCTGGAACTTCCGC 59.749 55.000 3.28 0.00 40.17 5.54
3980 4922 0.452184 GAAGGCGACGATGACAGAGA 59.548 55.000 0.00 0.00 0.00 3.10
4115 5057 5.240844 AGCTGTTTGGTTGTATAACTGGAAC 59.759 40.000 2.17 5.90 36.99 3.62
4178 5122 1.338973 CCAAGTTGCTGACATGTTGCT 59.661 47.619 20.27 3.67 0.00 3.91
4204 5148 3.694072 ACTTGGCTAATGATTTGCGCTTA 59.306 39.130 9.73 0.00 0.00 3.09
4266 5959 8.729756 ACATATGACTCGATTTTCACATTTTCA 58.270 29.630 10.38 0.00 0.00 2.69
4372 6065 4.625607 ACAGAAAACACTCTCCCTAAGG 57.374 45.455 0.00 0.00 0.00 2.69
4377 6070 4.368565 AAACACTCTCCCTAAGGAAACC 57.631 45.455 0.00 0.00 43.40 3.27
4379 6072 1.560146 CACTCTCCCTAAGGAAACCCC 59.440 57.143 0.00 0.00 43.40 4.95
4381 6074 0.619543 TCTCCCTAAGGAAACCCCGG 60.620 60.000 0.00 0.00 43.40 5.73
4389 6082 2.555732 AGGAAACCCCGGACATACTA 57.444 50.000 0.73 0.00 40.87 1.82
4461 6155 4.212636 ACAATAACAGCAACGTGTACCTTC 59.787 41.667 0.00 0.00 0.00 3.46
4528 6233 6.591834 AGATTCAGATAGACCAACTGTTTTCG 59.408 38.462 0.00 0.00 33.93 3.46
4711 6421 3.582780 CTTCTCTTGCCATTTCTTTGCC 58.417 45.455 0.00 0.00 0.00 4.52
4759 6469 1.334054 GTCGGATGACACGTGTACAC 58.666 55.000 23.44 16.32 44.82 2.90
4760 6470 2.307517 GTCGGATGACACGTGTACACG 61.308 57.143 39.06 39.06 46.73 4.49
4769 6479 4.052519 GTGTACACGTGGGGTTGG 57.947 61.111 21.57 0.00 0.00 3.77
4770 6480 1.598685 GTGTACACGTGGGGTTGGG 60.599 63.158 21.57 0.00 0.00 4.12
4771 6481 1.765255 TGTACACGTGGGGTTGGGA 60.765 57.895 21.57 0.00 0.00 4.37
4772 6482 1.004200 GTACACGTGGGGTTGGGAG 60.004 63.158 21.57 0.00 0.00 4.30
4773 6483 2.886134 TACACGTGGGGTTGGGAGC 61.886 63.158 21.57 0.00 0.00 4.70
4774 6484 3.953775 CACGTGGGGTTGGGAGCT 61.954 66.667 7.95 0.00 0.00 4.09
4775 6485 3.175710 ACGTGGGGTTGGGAGCTT 61.176 61.111 0.00 0.00 0.00 3.74
4776 6486 2.359975 CGTGGGGTTGGGAGCTTC 60.360 66.667 0.00 0.00 0.00 3.86
4777 6487 2.843545 GTGGGGTTGGGAGCTTCA 59.156 61.111 0.00 0.00 0.00 3.02
4778 6488 1.603739 GTGGGGTTGGGAGCTTCAC 60.604 63.158 0.00 0.00 0.00 3.18
4779 6489 2.035783 GGGGTTGGGAGCTTCACC 59.964 66.667 0.00 0.00 0.00 4.02
4780 6490 2.539081 GGGGTTGGGAGCTTCACCT 61.539 63.158 1.70 0.00 0.00 4.00
4781 6491 1.460699 GGGTTGGGAGCTTCACCTT 59.539 57.895 1.70 0.00 0.00 3.50
4782 6492 0.895559 GGGTTGGGAGCTTCACCTTG 60.896 60.000 1.70 0.00 0.00 3.61
4783 6493 0.110486 GGTTGGGAGCTTCACCTTGA 59.890 55.000 0.00 0.00 0.00 3.02
4784 6494 1.272147 GGTTGGGAGCTTCACCTTGAT 60.272 52.381 0.00 0.00 0.00 2.57
4785 6495 1.815003 GTTGGGAGCTTCACCTTGATG 59.185 52.381 0.00 0.00 0.00 3.07
4786 6496 1.361204 TGGGAGCTTCACCTTGATGA 58.639 50.000 0.00 0.00 0.00 2.92
4787 6497 1.918262 TGGGAGCTTCACCTTGATGAT 59.082 47.619 0.00 0.00 0.00 2.45
4788 6498 2.295885 GGGAGCTTCACCTTGATGATG 58.704 52.381 0.00 0.00 0.00 3.07
4789 6499 1.674962 GGAGCTTCACCTTGATGATGC 59.325 52.381 5.71 5.71 45.50 3.91
4790 6500 1.674962 GAGCTTCACCTTGATGATGCC 59.325 52.381 9.30 0.30 46.02 4.40
4791 6501 1.284198 AGCTTCACCTTGATGATGCCT 59.716 47.619 9.30 0.00 46.02 4.75
4792 6502 2.097825 GCTTCACCTTGATGATGCCTT 58.902 47.619 3.02 0.00 41.56 4.35
4793 6503 2.098770 GCTTCACCTTGATGATGCCTTC 59.901 50.000 3.02 0.00 41.56 3.46
4794 6504 3.349927 CTTCACCTTGATGATGCCTTCA 58.650 45.455 0.00 0.00 39.12 3.02
4796 6506 3.284617 TCACCTTGATGATGCCTTCATG 58.715 45.455 4.13 0.00 45.29 3.07
4797 6507 3.054213 TCACCTTGATGATGCCTTCATGA 60.054 43.478 4.13 0.00 45.29 3.07
4798 6508 3.697542 CACCTTGATGATGCCTTCATGAA 59.302 43.478 8.12 8.12 45.29 2.57
4814 6524 6.925610 TTCATGAAGGAAACGATGATAAGG 57.074 37.500 3.38 0.00 0.00 2.69
4815 6525 5.368145 TCATGAAGGAAACGATGATAAGGG 58.632 41.667 0.00 0.00 0.00 3.95
4816 6526 3.541632 TGAAGGAAACGATGATAAGGGC 58.458 45.455 0.00 0.00 0.00 5.19
4817 6527 3.054728 TGAAGGAAACGATGATAAGGGCA 60.055 43.478 0.00 0.00 0.00 5.36
4818 6528 3.864789 AGGAAACGATGATAAGGGCAT 57.135 42.857 0.00 0.00 0.00 4.40
4819 6529 3.744660 AGGAAACGATGATAAGGGCATC 58.255 45.455 0.00 0.00 38.95 3.91
4820 6530 3.136443 AGGAAACGATGATAAGGGCATCA 59.864 43.478 0.00 0.00 41.66 3.07
4821 6531 4.074970 GGAAACGATGATAAGGGCATCAT 58.925 43.478 0.00 0.00 46.06 2.45
4827 6537 2.703416 TGATAAGGGCATCATCATCGC 58.297 47.619 0.00 0.00 29.93 4.58
4828 6538 2.012673 GATAAGGGCATCATCATCGCC 58.987 52.381 0.00 0.00 45.47 5.54
4831 6541 3.730761 GGCATCATCATCGCCGGC 61.731 66.667 19.07 19.07 35.79 6.13
4832 6542 2.667536 GCATCATCATCGCCGGCT 60.668 61.111 26.68 2.78 0.00 5.52
4833 6543 2.675056 GCATCATCATCGCCGGCTC 61.675 63.158 26.68 0.00 0.00 4.70
4834 6544 2.031516 CATCATCATCGCCGGCTCC 61.032 63.158 26.68 0.00 0.00 4.70
4835 6545 3.580100 ATCATCATCGCCGGCTCCG 62.580 63.158 26.68 12.33 39.44 4.63
4847 6557 2.268920 GCTCCGGCCAATGACTGA 59.731 61.111 2.24 0.00 0.00 3.41
4848 6558 1.377202 GCTCCGGCCAATGACTGAA 60.377 57.895 2.24 0.00 0.00 3.02
4849 6559 1.372087 GCTCCGGCCAATGACTGAAG 61.372 60.000 2.24 0.00 0.00 3.02
4850 6560 0.250234 CTCCGGCCAATGACTGAAGA 59.750 55.000 2.24 0.00 0.00 2.87
4851 6561 0.036388 TCCGGCCAATGACTGAAGAC 60.036 55.000 2.24 0.00 0.00 3.01
4852 6562 1.026718 CCGGCCAATGACTGAAGACC 61.027 60.000 2.24 0.00 0.00 3.85
4853 6563 0.321564 CGGCCAATGACTGAAGACCA 60.322 55.000 2.24 0.00 0.00 4.02
4854 6564 1.881925 CGGCCAATGACTGAAGACCAA 60.882 52.381 2.24 0.00 0.00 3.67
4855 6565 1.815003 GGCCAATGACTGAAGACCAAG 59.185 52.381 0.00 0.00 0.00 3.61
4856 6566 2.508526 GCCAATGACTGAAGACCAAGT 58.491 47.619 0.00 0.00 0.00 3.16
4857 6567 2.887152 GCCAATGACTGAAGACCAAGTT 59.113 45.455 0.00 0.00 0.00 2.66
4858 6568 3.319122 GCCAATGACTGAAGACCAAGTTT 59.681 43.478 0.00 0.00 0.00 2.66
4859 6569 4.202151 GCCAATGACTGAAGACCAAGTTTT 60.202 41.667 0.00 0.00 0.00 2.43
4860 6570 5.523369 CCAATGACTGAAGACCAAGTTTTC 58.477 41.667 0.00 0.00 0.00 2.29
4861 6571 5.067674 CCAATGACTGAAGACCAAGTTTTCA 59.932 40.000 1.40 1.40 34.95 2.69
4862 6572 5.757850 ATGACTGAAGACCAAGTTTTCAC 57.242 39.130 0.00 0.00 32.93 3.18
4863 6573 3.945285 TGACTGAAGACCAAGTTTTCACC 59.055 43.478 0.00 0.00 32.93 4.02
4864 6574 3.288092 ACTGAAGACCAAGTTTTCACCC 58.712 45.455 0.00 0.00 32.93 4.61
4865 6575 2.623416 CTGAAGACCAAGTTTTCACCCC 59.377 50.000 0.00 0.00 32.93 4.95
4866 6576 1.607148 GAAGACCAAGTTTTCACCCCG 59.393 52.381 0.00 0.00 28.89 5.73
4867 6577 0.841289 AGACCAAGTTTTCACCCCGA 59.159 50.000 0.00 0.00 0.00 5.14
4868 6578 1.423921 AGACCAAGTTTTCACCCCGAT 59.576 47.619 0.00 0.00 0.00 4.18
4869 6579 1.810755 GACCAAGTTTTCACCCCGATC 59.189 52.381 0.00 0.00 0.00 3.69
4870 6580 1.173913 CCAAGTTTTCACCCCGATCC 58.826 55.000 0.00 0.00 0.00 3.36
4871 6581 0.802494 CAAGTTTTCACCCCGATCCG 59.198 55.000 0.00 0.00 0.00 4.18
4872 6582 0.399075 AAGTTTTCACCCCGATCCGT 59.601 50.000 0.00 0.00 0.00 4.69
4873 6583 0.036671 AGTTTTCACCCCGATCCGTC 60.037 55.000 0.00 0.00 0.00 4.79
4874 6584 1.022982 GTTTTCACCCCGATCCGTCC 61.023 60.000 0.00 0.00 0.00 4.79
4875 6585 1.196104 TTTTCACCCCGATCCGTCCT 61.196 55.000 0.00 0.00 0.00 3.85
4876 6586 0.324552 TTTCACCCCGATCCGTCCTA 60.325 55.000 0.00 0.00 0.00 2.94
4877 6587 0.324552 TTCACCCCGATCCGTCCTAA 60.325 55.000 0.00 0.00 0.00 2.69
4878 6588 0.754217 TCACCCCGATCCGTCCTAAG 60.754 60.000 0.00 0.00 0.00 2.18
4879 6589 0.754217 CACCCCGATCCGTCCTAAGA 60.754 60.000 0.00 0.00 0.00 2.10
4880 6590 0.032813 ACCCCGATCCGTCCTAAGAA 60.033 55.000 0.00 0.00 0.00 2.52
4881 6591 1.117150 CCCCGATCCGTCCTAAGAAA 58.883 55.000 0.00 0.00 0.00 2.52
4882 6592 1.692519 CCCCGATCCGTCCTAAGAAAT 59.307 52.381 0.00 0.00 0.00 2.17
4883 6593 2.288886 CCCCGATCCGTCCTAAGAAATC 60.289 54.545 0.00 0.00 0.00 2.17
4884 6594 2.288886 CCCGATCCGTCCTAAGAAATCC 60.289 54.545 0.00 0.00 0.00 3.01
4885 6595 2.364324 CCGATCCGTCCTAAGAAATCCA 59.636 50.000 0.00 0.00 0.00 3.41
4886 6596 3.381949 CGATCCGTCCTAAGAAATCCAC 58.618 50.000 0.00 0.00 0.00 4.02
4887 6597 3.729966 GATCCGTCCTAAGAAATCCACC 58.270 50.000 0.00 0.00 0.00 4.61
4888 6598 2.829023 TCCGTCCTAAGAAATCCACCT 58.171 47.619 0.00 0.00 0.00 4.00
4889 6599 2.500098 TCCGTCCTAAGAAATCCACCTG 59.500 50.000 0.00 0.00 0.00 4.00
4890 6600 2.500098 CCGTCCTAAGAAATCCACCTGA 59.500 50.000 0.00 0.00 0.00 3.86
4891 6601 3.134804 CCGTCCTAAGAAATCCACCTGAT 59.865 47.826 0.00 0.00 34.22 2.90
4892 6602 4.344102 CCGTCCTAAGAAATCCACCTGATA 59.656 45.833 0.00 0.00 31.83 2.15
4893 6603 5.163343 CCGTCCTAAGAAATCCACCTGATAA 60.163 44.000 0.00 0.00 31.83 1.75
4894 6604 5.753921 CGTCCTAAGAAATCCACCTGATAAC 59.246 44.000 0.00 0.00 31.83 1.89
4895 6605 6.407074 CGTCCTAAGAAATCCACCTGATAACT 60.407 42.308 0.00 0.00 31.83 2.24
4896 6606 7.339482 GTCCTAAGAAATCCACCTGATAACTT 58.661 38.462 0.00 0.00 35.06 2.66
4897 6607 7.281100 GTCCTAAGAAATCCACCTGATAACTTG 59.719 40.741 0.00 0.00 33.79 3.16
4898 6608 7.037586 TCCTAAGAAATCCACCTGATAACTTGT 60.038 37.037 0.00 0.00 33.79 3.16
4899 6609 6.824305 AAGAAATCCACCTGATAACTTGTG 57.176 37.500 0.00 0.00 31.95 3.33
4900 6610 4.702131 AGAAATCCACCTGATAACTTGTGC 59.298 41.667 0.00 0.00 31.83 4.57
4901 6611 3.719268 ATCCACCTGATAACTTGTGCA 57.281 42.857 0.00 0.00 0.00 4.57
4902 6612 2.778299 TCCACCTGATAACTTGTGCAC 58.222 47.619 10.75 10.75 0.00 4.57
4903 6613 2.371841 TCCACCTGATAACTTGTGCACT 59.628 45.455 19.41 0.00 0.00 4.40
4904 6614 2.485426 CCACCTGATAACTTGTGCACTG 59.515 50.000 19.41 13.21 0.00 3.66
4905 6615 3.141398 CACCTGATAACTTGTGCACTGT 58.859 45.455 19.41 13.88 0.00 3.55
4906 6616 3.187227 CACCTGATAACTTGTGCACTGTC 59.813 47.826 19.41 6.02 0.00 3.51
4907 6617 3.071602 ACCTGATAACTTGTGCACTGTCT 59.928 43.478 19.41 8.09 0.00 3.41
4908 6618 3.681897 CCTGATAACTTGTGCACTGTCTC 59.318 47.826 19.41 15.60 0.00 3.36
4909 6619 3.317150 TGATAACTTGTGCACTGTCTCG 58.683 45.455 19.41 2.53 0.00 4.04
4910 6620 3.005367 TGATAACTTGTGCACTGTCTCGA 59.995 43.478 19.41 4.57 0.00 4.04
4911 6621 1.571919 AACTTGTGCACTGTCTCGAC 58.428 50.000 19.41 0.00 0.00 4.20
4912 6622 0.249489 ACTTGTGCACTGTCTCGACC 60.249 55.000 19.41 0.00 0.00 4.79
4913 6623 1.278172 CTTGTGCACTGTCTCGACCG 61.278 60.000 19.41 0.00 0.00 4.79
4914 6624 3.106407 GTGCACTGTCTCGACCGC 61.106 66.667 10.32 0.00 0.00 5.68
4915 6625 4.357947 TGCACTGTCTCGACCGCC 62.358 66.667 0.00 0.00 0.00 6.13
4916 6626 4.057428 GCACTGTCTCGACCGCCT 62.057 66.667 0.00 0.00 0.00 5.52
4917 6627 2.651361 CACTGTCTCGACCGCCTT 59.349 61.111 0.00 0.00 0.00 4.35
4918 6628 1.444553 CACTGTCTCGACCGCCTTC 60.445 63.158 0.00 0.00 0.00 3.46
4919 6629 1.901948 ACTGTCTCGACCGCCTTCA 60.902 57.895 0.00 0.00 0.00 3.02
4920 6630 1.289066 CTGTCTCGACCGCCTTCAA 59.711 57.895 0.00 0.00 0.00 2.69
4921 6631 0.319555 CTGTCTCGACCGCCTTCAAA 60.320 55.000 0.00 0.00 0.00 2.69
4922 6632 0.319555 TGTCTCGACCGCCTTCAAAG 60.320 55.000 0.00 0.00 0.00 2.77
4923 6633 1.374252 TCTCGACCGCCTTCAAAGC 60.374 57.895 0.00 0.00 0.00 3.51
4924 6634 2.358247 TCGACCGCCTTCAAAGCC 60.358 61.111 0.00 0.00 0.00 4.35
4925 6635 3.431725 CGACCGCCTTCAAAGCCC 61.432 66.667 0.00 0.00 0.00 5.19
4926 6636 3.062466 GACCGCCTTCAAAGCCCC 61.062 66.667 0.00 0.00 0.00 5.80
4927 6637 3.860930 GACCGCCTTCAAAGCCCCA 62.861 63.158 0.00 0.00 0.00 4.96
4928 6638 3.064324 CCGCCTTCAAAGCCCCAG 61.064 66.667 0.00 0.00 0.00 4.45
4929 6639 2.034066 CGCCTTCAAAGCCCCAGA 59.966 61.111 0.00 0.00 0.00 3.86
4930 6640 1.379044 CGCCTTCAAAGCCCCAGAT 60.379 57.895 0.00 0.00 0.00 2.90
4931 6641 1.379642 CGCCTTCAAAGCCCCAGATC 61.380 60.000 0.00 0.00 0.00 2.75
4932 6642 0.033699 GCCTTCAAAGCCCCAGATCT 60.034 55.000 0.00 0.00 0.00 2.75
4933 6643 1.212935 GCCTTCAAAGCCCCAGATCTA 59.787 52.381 0.00 0.00 0.00 1.98
4934 6644 2.747799 GCCTTCAAAGCCCCAGATCTAG 60.748 54.545 0.00 0.00 0.00 2.43
4935 6645 2.570135 CTTCAAAGCCCCAGATCTAGC 58.430 52.381 0.00 0.00 0.00 3.42
4936 6646 0.839946 TCAAAGCCCCAGATCTAGCC 59.160 55.000 0.00 0.00 0.00 3.93
4937 6647 0.533755 CAAAGCCCCAGATCTAGCCG 60.534 60.000 0.00 0.00 0.00 5.52
4938 6648 2.330924 AAAGCCCCAGATCTAGCCGC 62.331 60.000 0.00 0.00 0.00 6.53
4939 6649 4.321966 GCCCCAGATCTAGCCGCC 62.322 72.222 0.00 0.00 0.00 6.13
4940 6650 2.525381 CCCCAGATCTAGCCGCCT 60.525 66.667 0.00 0.00 0.00 5.52
4941 6651 1.228894 CCCCAGATCTAGCCGCCTA 60.229 63.158 0.00 0.00 0.00 3.93
4942 6652 1.254284 CCCCAGATCTAGCCGCCTAG 61.254 65.000 0.00 0.00 42.01 3.02
4947 6657 4.399180 TCTAGCCGCCTAGATCCG 57.601 61.111 0.00 0.00 43.89 4.18
4948 6658 1.303398 TCTAGCCGCCTAGATCCGG 60.303 63.158 0.00 0.00 43.89 5.14
4954 6664 3.224324 GCCTAGATCCGGCGACCA 61.224 66.667 9.30 0.00 37.87 4.02
4955 6665 2.792947 GCCTAGATCCGGCGACCAA 61.793 63.158 9.30 0.00 37.87 3.67
4956 6666 1.067582 CCTAGATCCGGCGACCAAC 59.932 63.158 9.30 0.00 0.00 3.77
4957 6667 1.067582 CTAGATCCGGCGACCAACC 59.932 63.158 9.30 0.00 0.00 3.77
4966 6676 3.276091 CGACCAACCGCAACAGCA 61.276 61.111 0.00 0.00 0.00 4.41
4967 6677 2.639286 GACCAACCGCAACAGCAG 59.361 61.111 0.00 0.00 0.00 4.24
4968 6678 2.124320 ACCAACCGCAACAGCAGT 60.124 55.556 0.00 0.00 0.00 4.40
4969 6679 2.332514 CCAACCGCAACAGCAGTG 59.667 61.111 0.00 0.00 0.00 3.66
4970 6680 2.353839 CAACCGCAACAGCAGTGC 60.354 61.111 7.13 7.13 0.00 4.40
4971 6681 3.595758 AACCGCAACAGCAGTGCC 61.596 61.111 12.58 0.00 0.00 5.01
4972 6682 4.873810 ACCGCAACAGCAGTGCCA 62.874 61.111 12.58 0.00 0.00 4.92
4973 6683 4.332637 CCGCAACAGCAGTGCCAC 62.333 66.667 12.58 0.00 0.00 5.01
4974 6684 4.332637 CGCAACAGCAGTGCCACC 62.333 66.667 12.58 0.00 0.00 4.61
4975 6685 4.332637 GCAACAGCAGTGCCACCG 62.333 66.667 12.58 0.30 0.00 4.94
4976 6686 2.901840 CAACAGCAGTGCCACCGT 60.902 61.111 12.58 1.00 0.00 4.83
4977 6687 1.596752 CAACAGCAGTGCCACCGTA 60.597 57.895 12.58 0.00 0.00 4.02
4978 6688 1.301716 AACAGCAGTGCCACCGTAG 60.302 57.895 12.58 0.00 0.00 3.51
5006 6716 4.648626 GCACCAGCCACTGCCTGA 62.649 66.667 0.00 0.00 38.69 3.86
5007 6717 2.113774 CACCAGCCACTGCCTGAA 59.886 61.111 0.00 0.00 38.69 3.02
5008 6718 1.303888 CACCAGCCACTGCCTGAAT 60.304 57.895 0.00 0.00 38.69 2.57
5009 6719 1.303888 ACCAGCCACTGCCTGAATG 60.304 57.895 0.00 0.00 38.69 2.67
5010 6720 2.707849 CCAGCCACTGCCTGAATGC 61.708 63.158 0.00 0.00 38.69 3.56
5011 6721 2.749044 AGCCACTGCCTGAATGCG 60.749 61.111 0.00 0.00 38.69 4.73
5012 6722 4.487412 GCCACTGCCTGAATGCGC 62.487 66.667 0.00 0.00 0.00 6.09
5013 6723 3.818787 CCACTGCCTGAATGCGCC 61.819 66.667 4.18 0.00 0.00 6.53
5014 6724 3.057548 CACTGCCTGAATGCGCCA 61.058 61.111 4.18 0.00 0.00 5.69
5015 6725 3.058160 ACTGCCTGAATGCGCCAC 61.058 61.111 4.18 0.00 0.00 5.01
5016 6726 3.818787 CTGCCTGAATGCGCCACC 61.819 66.667 4.18 0.00 0.00 4.61
5017 6727 4.657408 TGCCTGAATGCGCCACCA 62.657 61.111 4.18 0.00 0.00 4.17
5018 6728 4.120331 GCCTGAATGCGCCACCAC 62.120 66.667 4.18 0.00 0.00 4.16
5019 6729 2.360350 CCTGAATGCGCCACCACT 60.360 61.111 4.18 0.00 0.00 4.00
5020 6730 2.693762 CCTGAATGCGCCACCACTG 61.694 63.158 4.18 0.00 0.00 3.66
5021 6731 2.672651 TGAATGCGCCACCACTGG 60.673 61.111 4.18 0.00 41.13 4.00
5022 6732 2.359850 GAATGCGCCACCACTGGA 60.360 61.111 4.18 0.00 40.55 3.86
5023 6733 2.360350 AATGCGCCACCACTGGAG 60.360 61.111 4.18 0.00 40.55 3.86
5028 6738 4.729918 GCCACCACTGGAGCCTGG 62.730 72.222 0.71 0.00 40.55 4.45
5029 6739 4.039092 CCACCACTGGAGCCTGGG 62.039 72.222 0.71 0.00 40.55 4.45
5030 6740 2.930019 CACCACTGGAGCCTGGGA 60.930 66.667 0.71 0.00 0.00 4.37
5031 6741 2.608988 ACCACTGGAGCCTGGGAG 60.609 66.667 0.71 0.00 0.00 4.30
5032 6742 3.406200 CCACTGGAGCCTGGGAGG 61.406 72.222 0.00 0.00 38.80 4.30
5033 6743 2.284921 CACTGGAGCCTGGGAGGA 60.285 66.667 0.00 0.00 37.67 3.71
5034 6744 2.040278 ACTGGAGCCTGGGAGGAG 59.960 66.667 0.00 0.00 37.67 3.69
5035 6745 2.767496 CTGGAGCCTGGGAGGAGG 60.767 72.222 0.00 0.00 37.67 4.30
5036 6746 4.421554 TGGAGCCTGGGAGGAGGG 62.422 72.222 0.00 0.00 37.67 4.30
5049 6759 3.403558 GAGGGCTCCCACTCCACC 61.404 72.222 7.82 0.00 38.92 4.61
5050 6760 3.933542 GAGGGCTCCCACTCCACCT 62.934 68.421 7.82 0.00 38.92 4.00
5051 6761 2.936032 GGGCTCCCACTCCACCTT 60.936 66.667 0.00 0.00 35.81 3.50
5052 6762 2.352805 GGCTCCCACTCCACCTTG 59.647 66.667 0.00 0.00 0.00 3.61
5053 6763 2.360475 GCTCCCACTCCACCTTGC 60.360 66.667 0.00 0.00 0.00 4.01
5054 6764 2.352805 CTCCCACTCCACCTTGCC 59.647 66.667 0.00 0.00 0.00 4.52
5055 6765 2.449518 TCCCACTCCACCTTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
5056 6766 2.067932 CTCCCACTCCACCTTGCCAA 62.068 60.000 0.00 0.00 0.00 4.52
5057 6767 1.152567 CCCACTCCACCTTGCCAAA 60.153 57.895 0.00 0.00 0.00 3.28
5058 6768 1.463553 CCCACTCCACCTTGCCAAAC 61.464 60.000 0.00 0.00 0.00 2.93
5059 6769 1.463553 CCACTCCACCTTGCCAAACC 61.464 60.000 0.00 0.00 0.00 3.27
5060 6770 1.528309 ACTCCACCTTGCCAAACCG 60.528 57.895 0.00 0.00 0.00 4.44
5061 6771 2.909965 TCCACCTTGCCAAACCGC 60.910 61.111 0.00 0.00 0.00 5.68
5062 6772 4.341502 CCACCTTGCCAAACCGCG 62.342 66.667 0.00 0.00 0.00 6.46
5063 6773 3.283684 CACCTTGCCAAACCGCGA 61.284 61.111 8.23 0.00 0.00 5.87
5064 6774 2.978010 ACCTTGCCAAACCGCGAG 60.978 61.111 8.23 0.00 39.61 5.03
5065 6775 2.668212 CCTTGCCAAACCGCGAGA 60.668 61.111 8.23 0.00 42.08 4.04
5066 6776 2.680913 CCTTGCCAAACCGCGAGAG 61.681 63.158 8.23 0.00 42.08 3.20
5078 6788 4.637489 CGAGAGCCGCCGAGATGG 62.637 72.222 0.00 0.00 42.50 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.438183 ACAATAAGGGAGTCCGTGTAGT 58.562 45.455 4.85 0.00 38.33 2.73
1 2 3.446161 TGACAATAAGGGAGTCCGTGTAG 59.554 47.826 4.85 0.00 38.33 2.74
2 3 3.433343 TGACAATAAGGGAGTCCGTGTA 58.567 45.455 4.85 1.16 38.33 2.90
3 4 2.233922 CTGACAATAAGGGAGTCCGTGT 59.766 50.000 4.85 3.12 38.33 4.49
4 5 2.496070 TCTGACAATAAGGGAGTCCGTG 59.504 50.000 4.85 0.00 38.33 4.94
5 6 2.496470 GTCTGACAATAAGGGAGTCCGT 59.504 50.000 2.26 0.00 38.33 4.69
6 7 2.496070 TGTCTGACAATAAGGGAGTCCG 59.504 50.000 8.27 0.00 38.33 4.79
7 8 3.515901 ACTGTCTGACAATAAGGGAGTCC 59.484 47.826 12.16 0.00 0.00 3.85
8 9 4.810191 ACTGTCTGACAATAAGGGAGTC 57.190 45.455 12.16 0.00 0.00 3.36
9 10 5.084519 TGTACTGTCTGACAATAAGGGAGT 58.915 41.667 12.16 6.17 0.00 3.85
10 11 5.661056 TGTACTGTCTGACAATAAGGGAG 57.339 43.478 12.16 0.11 0.00 4.30
11 12 5.279809 GGTTGTACTGTCTGACAATAAGGGA 60.280 44.000 12.16 0.00 37.84 4.20
12 13 4.935808 GGTTGTACTGTCTGACAATAAGGG 59.064 45.833 12.16 1.57 37.84 3.95
13 14 4.625742 CGGTTGTACTGTCTGACAATAAGG 59.374 45.833 12.16 2.30 37.84 2.69
14 15 5.227908 ACGGTTGTACTGTCTGACAATAAG 58.772 41.667 12.16 2.67 37.84 1.73
15 16 5.204409 ACGGTTGTACTGTCTGACAATAA 57.796 39.130 12.16 0.00 37.84 1.40
16 17 4.859304 ACGGTTGTACTGTCTGACAATA 57.141 40.909 12.16 3.12 37.84 1.90
17 18 3.746045 ACGGTTGTACTGTCTGACAAT 57.254 42.857 12.16 4.26 37.84 2.71
18 19 3.968649 GTACGGTTGTACTGTCTGACAA 58.031 45.455 12.16 0.00 46.07 3.18
19 20 3.631145 GTACGGTTGTACTGTCTGACA 57.369 47.619 10.50 10.50 46.07 3.58
20 21 6.049344 ACCTGTACGGTTGTACTGTCTGAC 62.049 50.000 0.00 0.00 46.37 3.51
21 22 3.999990 ACCTGTACGGTTGTACTGTCTGA 61.000 47.826 0.00 0.00 46.37 3.27
22 23 2.295349 ACCTGTACGGTTGTACTGTCTG 59.705 50.000 0.00 0.00 46.37 3.51
23 24 2.295349 CACCTGTACGGTTGTACTGTCT 59.705 50.000 6.65 0.00 46.37 3.41
24 25 2.669364 CACCTGTACGGTTGTACTGTC 58.331 52.381 6.65 0.00 46.37 3.51
25 26 1.269936 GCACCTGTACGGTTGTACTGT 60.270 52.381 6.65 0.00 46.37 3.55
26 27 1.000506 AGCACCTGTACGGTTGTACTG 59.999 52.381 6.65 6.36 46.37 2.74
27 28 1.335145 AGCACCTGTACGGTTGTACT 58.665 50.000 6.65 0.00 46.37 2.73
28 29 3.119388 TGATAGCACCTGTACGGTTGTAC 60.119 47.826 6.65 0.00 46.37 2.90
29 30 3.090790 TGATAGCACCTGTACGGTTGTA 58.909 45.455 6.65 3.14 46.37 2.41
30 31 1.897133 TGATAGCACCTGTACGGTTGT 59.103 47.619 6.65 0.00 46.37 3.32
31 32 2.094182 ACTGATAGCACCTGTACGGTTG 60.094 50.000 6.65 0.70 46.37 3.77
32 33 2.176889 ACTGATAGCACCTGTACGGTT 58.823 47.619 6.65 0.00 46.37 4.44
34 35 4.299155 CAATACTGATAGCACCTGTACGG 58.701 47.826 0.00 0.00 39.35 4.02
35 36 3.736252 GCAATACTGATAGCACCTGTACG 59.264 47.826 0.00 0.00 0.00 3.67
36 37 4.693283 TGCAATACTGATAGCACCTGTAC 58.307 43.478 0.00 0.00 31.05 2.90
38 39 3.912496 TGCAATACTGATAGCACCTGT 57.088 42.857 0.00 0.00 31.05 4.00
43 44 5.027293 AGTCATGTGCAATACTGATAGCA 57.973 39.130 0.00 0.00 34.10 3.49
44 45 5.277683 CCAAGTCATGTGCAATACTGATAGC 60.278 44.000 0.00 0.00 0.00 2.97
45 46 5.819379 ACCAAGTCATGTGCAATACTGATAG 59.181 40.000 0.00 0.00 0.00 2.08
46 47 5.585844 CACCAAGTCATGTGCAATACTGATA 59.414 40.000 0.00 0.00 0.00 2.15
47 48 4.397103 CACCAAGTCATGTGCAATACTGAT 59.603 41.667 0.00 0.00 0.00 2.90
48 49 3.752747 CACCAAGTCATGTGCAATACTGA 59.247 43.478 0.00 0.00 0.00 3.41
49 50 3.752747 TCACCAAGTCATGTGCAATACTG 59.247 43.478 0.00 0.00 32.51 2.74
50 51 4.019792 TCACCAAGTCATGTGCAATACT 57.980 40.909 0.00 0.00 32.51 2.12
51 52 4.023279 TGTTCACCAAGTCATGTGCAATAC 60.023 41.667 0.00 0.00 32.51 1.89
52 53 4.023279 GTGTTCACCAAGTCATGTGCAATA 60.023 41.667 0.00 0.00 32.51 1.90
53 54 2.957680 TGTTCACCAAGTCATGTGCAAT 59.042 40.909 0.00 0.00 32.51 3.56
54 55 2.098934 GTGTTCACCAAGTCATGTGCAA 59.901 45.455 0.00 0.00 32.51 4.08
55 56 1.675483 GTGTTCACCAAGTCATGTGCA 59.325 47.619 0.00 0.00 32.51 4.57
56 57 1.949525 AGTGTTCACCAAGTCATGTGC 59.050 47.619 0.00 0.00 32.51 4.57
57 58 2.549754 GGAGTGTTCACCAAGTCATGTG 59.450 50.000 0.00 0.00 0.00 3.21
58 59 2.487265 GGGAGTGTTCACCAAGTCATGT 60.487 50.000 0.00 0.00 0.00 3.21
59 60 2.154462 GGGAGTGTTCACCAAGTCATG 58.846 52.381 0.00 0.00 0.00 3.07
60 61 1.774254 TGGGAGTGTTCACCAAGTCAT 59.226 47.619 0.00 0.00 0.00 3.06
61 62 1.134220 GTGGGAGTGTTCACCAAGTCA 60.134 52.381 0.00 0.00 35.77 3.41
62 63 1.134220 TGTGGGAGTGTTCACCAAGTC 60.134 52.381 0.00 0.00 35.77 3.01
63 64 0.916086 TGTGGGAGTGTTCACCAAGT 59.084 50.000 0.00 0.00 35.77 3.16
64 65 1.949525 CTTGTGGGAGTGTTCACCAAG 59.050 52.381 0.00 2.73 35.77 3.61
65 66 1.283613 ACTTGTGGGAGTGTTCACCAA 59.716 47.619 0.00 0.00 35.77 3.67
66 67 0.916086 ACTTGTGGGAGTGTTCACCA 59.084 50.000 0.00 0.00 33.29 4.17
67 68 1.134220 TCACTTGTGGGAGTGTTCACC 60.134 52.381 5.09 0.00 45.64 4.02
68 69 1.940613 GTCACTTGTGGGAGTGTTCAC 59.059 52.381 5.09 0.00 45.64 3.18
69 70 1.557371 TGTCACTTGTGGGAGTGTTCA 59.443 47.619 5.09 4.04 45.64 3.18
70 71 2.325583 TGTCACTTGTGGGAGTGTTC 57.674 50.000 5.09 1.89 45.64 3.18
71 72 2.290641 TGTTGTCACTTGTGGGAGTGTT 60.291 45.455 5.09 0.00 45.64 3.32
72 73 1.280710 TGTTGTCACTTGTGGGAGTGT 59.719 47.619 5.09 0.00 45.64 3.55
73 74 2.036958 TGTTGTCACTTGTGGGAGTG 57.963 50.000 0.64 0.00 46.58 3.51
74 75 2.290641 TGTTGTTGTCACTTGTGGGAGT 60.291 45.455 0.64 0.00 0.00 3.85
75 76 2.355756 CTGTTGTTGTCACTTGTGGGAG 59.644 50.000 0.64 0.00 0.00 4.30
76 77 2.290641 ACTGTTGTTGTCACTTGTGGGA 60.291 45.455 0.64 0.00 0.00 4.37
77 78 2.091541 ACTGTTGTTGTCACTTGTGGG 58.908 47.619 0.64 0.00 0.00 4.61
78 79 2.731968 GCACTGTTGTTGTCACTTGTGG 60.732 50.000 0.64 0.00 0.00 4.17
79 80 2.162208 AGCACTGTTGTTGTCACTTGTG 59.838 45.455 0.00 0.00 0.00 3.33
80 81 2.436417 AGCACTGTTGTTGTCACTTGT 58.564 42.857 0.00 0.00 0.00 3.16
81 82 3.492421 AAGCACTGTTGTTGTCACTTG 57.508 42.857 0.00 0.00 0.00 3.16
82 83 5.637006 TTTAAGCACTGTTGTTGTCACTT 57.363 34.783 0.00 0.00 0.00 3.16
83 84 5.637006 TTTTAAGCACTGTTGTTGTCACT 57.363 34.783 0.00 0.00 0.00 3.41
84 85 7.193595 ACTATTTTAAGCACTGTTGTTGTCAC 58.806 34.615 0.00 0.00 0.00 3.67
85 86 7.328277 ACTATTTTAAGCACTGTTGTTGTCA 57.672 32.000 0.00 0.00 0.00 3.58
86 87 8.129211 AGAACTATTTTAAGCACTGTTGTTGTC 58.871 33.333 0.00 0.00 0.00 3.18
193 222 7.086230 ACTACAGCATACAGTACTAGTTCAC 57.914 40.000 0.00 0.00 0.00 3.18
235 299 0.322997 TTTGCGTTGGGTAGGATGGG 60.323 55.000 0.00 0.00 0.00 4.00
677 819 2.827190 TACTCGTCGGCGATGGCT 60.827 61.111 27.09 15.32 46.80 4.75
822 976 8.747471 AGATAATCAGATCATTATCGAGCTCAA 58.253 33.333 15.40 0.00 45.09 3.02
847 1001 7.867403 ACAACACAACAATTAAGATTTGCCTAG 59.133 33.333 0.00 0.00 0.00 3.02
857 1011 7.484975 TGGAAGGTAACAACACAACAATTAAG 58.515 34.615 0.00 0.00 41.41 1.85
879 1035 4.355287 TCAGATAGGATCCTTAGCTCTGGA 59.645 45.833 26.55 17.70 36.72 3.86
895 1051 5.471797 ACTGTGGTATGATCTCGTCAGATAG 59.528 44.000 0.00 0.00 39.71 2.08
960 1116 2.049063 GTCGCGTCCAGTTCAGCT 60.049 61.111 5.77 0.00 0.00 4.24
975 1131 0.166379 ACTCGAGCTCTTTCGTCGTC 59.834 55.000 13.61 0.00 41.22 4.20
1044 1200 6.826668 TCAGAGTTCAGGTAAGAAATGACAA 58.173 36.000 0.00 0.00 0.00 3.18
1047 1207 7.094634 GCATTTCAGAGTTCAGGTAAGAAATGA 60.095 37.037 21.98 0.00 46.70 2.57
1067 1227 4.397417 ACTCTGAATGTAAGCCAGCATTTC 59.603 41.667 0.00 0.00 35.69 2.17
1134 1295 4.090819 TGTTAGGTACTGATGCTGGTGTA 58.909 43.478 0.00 0.00 41.52 2.90
1216 1585 6.481976 TCGATGCTCACTTCAGTAAAAAGAAA 59.518 34.615 0.00 0.00 0.00 2.52
1217 1586 5.989168 TCGATGCTCACTTCAGTAAAAAGAA 59.011 36.000 0.00 0.00 0.00 2.52
1219 1588 5.177511 TGTCGATGCTCACTTCAGTAAAAAG 59.822 40.000 0.00 0.00 0.00 2.27
1251 1653 3.961408 ACAAGTTACTGTCTCTGTGGACT 59.039 43.478 0.00 0.00 37.16 3.85
1277 1681 2.880890 AGTTGCTTCATTTCAGTTCGCT 59.119 40.909 0.00 0.00 0.00 4.93
1278 1682 3.273919 AGTTGCTTCATTTCAGTTCGC 57.726 42.857 0.00 0.00 0.00 4.70
1280 1684 6.972328 TGTGTTTAGTTGCTTCATTTCAGTTC 59.028 34.615 0.00 0.00 0.00 3.01
1391 1911 9.244799 GTAACCCATTTATTTTATAACTGCTGC 57.755 33.333 0.00 0.00 0.00 5.25
1444 1983 0.467290 TTTCACGCCCTTTTCAGCCT 60.467 50.000 0.00 0.00 0.00 4.58
1580 2120 1.701292 TGCTCCCAGCTGCATATGTAT 59.299 47.619 8.66 0.00 42.97 2.29
1705 2246 4.201930 ACAGTCGATATCGGTGTTCTTCTC 60.202 45.833 24.12 3.77 40.29 2.87
1743 2284 5.424757 TGGAAATTCCACTTACTATCCGTG 58.575 41.667 11.23 0.00 42.67 4.94
1744 2285 5.687166 TGGAAATTCCACTTACTATCCGT 57.313 39.130 11.23 0.00 42.67 4.69
2279 2865 5.980715 AGCACCCTAAAACAATAAAACAACG 59.019 36.000 0.00 0.00 0.00 4.10
2309 2919 1.815408 GCCATGTCCAGTGTGTTGACT 60.815 52.381 0.00 0.00 0.00 3.41
2359 2969 2.827642 GCTCATGCAGCCCCAGAC 60.828 66.667 0.00 0.00 43.17 3.51
2444 3055 7.775561 ACTCTAAAGTTGAGGTGAAAATTCAGT 59.224 33.333 0.00 0.00 35.13 3.41
2478 3089 4.699735 TGCAGACATCGGTGTTCATATTTT 59.300 37.500 1.13 0.00 39.09 1.82
2479 3090 4.260985 TGCAGACATCGGTGTTCATATTT 58.739 39.130 1.13 0.00 39.09 1.40
2482 3093 2.233676 ACTGCAGACATCGGTGTTCATA 59.766 45.455 23.35 0.00 39.09 2.15
2537 3152 4.156556 ACATATCACGCTTTTTCAGTGCAT 59.843 37.500 0.00 0.00 36.33 3.96
2538 3153 3.501828 ACATATCACGCTTTTTCAGTGCA 59.498 39.130 0.00 0.00 36.33 4.57
2642 3261 2.231235 CCCACCTACATGTTTTGGCTTC 59.769 50.000 2.30 0.00 0.00 3.86
2851 3739 4.895297 AGACCACAAAAAGGACATGAACAT 59.105 37.500 0.00 0.00 0.00 2.71
2868 3757 1.066071 GGGGAGTTCTGCTAAGACCAC 60.066 57.143 0.00 0.00 29.98 4.16
2897 3790 2.624838 CTGACATCAAAAGCACCCTGTT 59.375 45.455 0.00 0.00 0.00 3.16
2913 3806 0.320683 CCAACTCCGATGTGCTGACA 60.321 55.000 0.00 0.00 36.22 3.58
2914 3807 1.021390 CCCAACTCCGATGTGCTGAC 61.021 60.000 0.00 0.00 0.00 3.51
2918 3811 0.179000 ATCTCCCAACTCCGATGTGC 59.821 55.000 0.00 0.00 0.00 4.57
2929 3822 2.357465 CCTTGCATTCTCCATCTCCCAA 60.357 50.000 0.00 0.00 0.00 4.12
3005 3898 4.224715 TGAGCTTATCGATTGTCCTACG 57.775 45.455 1.71 0.00 0.00 3.51
3006 3899 6.019779 AGATGAGCTTATCGATTGTCCTAC 57.980 41.667 12.39 0.00 32.33 3.18
3030 3923 7.795047 TGATGGAGCTACTAAGAATTTGATGA 58.205 34.615 0.00 0.00 0.00 2.92
3062 3956 3.611113 GCGCGTATGAATATACATCGGTT 59.389 43.478 8.43 0.00 39.29 4.44
3063 3957 3.176708 GCGCGTATGAATATACATCGGT 58.823 45.455 8.43 0.00 39.29 4.69
3064 3958 2.534349 GGCGCGTATGAATATACATCGG 59.466 50.000 8.43 0.00 39.29 4.18
3066 3960 4.625742 ACAAGGCGCGTATGAATATACATC 59.374 41.667 8.43 0.00 39.29 3.06
3070 3964 4.171005 GCTACAAGGCGCGTATGAATATA 58.829 43.478 8.43 0.00 0.00 0.86
3071 3965 2.993899 GCTACAAGGCGCGTATGAATAT 59.006 45.455 8.43 0.00 0.00 1.28
3251 4145 6.646653 TCATCCAGAATATTTCTCACATACGC 59.353 38.462 0.00 0.00 38.11 4.42
3485 4415 5.127845 TGTTCTCAAAACCCTGCACATTTAA 59.872 36.000 0.00 0.00 0.00 1.52
3486 4416 4.646945 TGTTCTCAAAACCCTGCACATTTA 59.353 37.500 0.00 0.00 0.00 1.40
3511 4441 2.676265 GGCACCCCCACTAATCGGT 61.676 63.158 0.00 0.00 0.00 4.69
3526 4457 2.223923 CCTTTTGATTCCAACAACGGCA 60.224 45.455 0.00 0.00 30.88 5.69
3579 4520 5.067153 TCCCTGTATTTCAAATTGCATACGG 59.933 40.000 13.01 13.01 0.00 4.02
3580 4521 5.971202 GTCCCTGTATTTCAAATTGCATACG 59.029 40.000 0.00 0.00 0.00 3.06
3581 4522 6.862209 TGTCCCTGTATTTCAAATTGCATAC 58.138 36.000 0.00 7.70 0.00 2.39
3582 4523 7.473735 TTGTCCCTGTATTTCAAATTGCATA 57.526 32.000 0.00 0.00 0.00 3.14
3688 4629 6.989169 CCTTATCTTCTTCATCGACCTGAATT 59.011 38.462 2.08 0.00 34.76 2.17
3744 4685 7.502226 TCACACAAAATTCAGAGAATGTAAGGT 59.498 33.333 0.00 0.00 0.00 3.50
3780 4722 1.202627 GCAATTGTCCAAAAGCACCCA 60.203 47.619 7.40 0.00 0.00 4.51
3786 4728 2.629617 ACCTCCTGCAATTGTCCAAAAG 59.370 45.455 7.40 0.00 0.00 2.27
3846 4788 0.855349 GATGCTGTCGCCGTAATCAG 59.145 55.000 0.00 0.00 34.43 2.90
3964 4906 0.382158 TCATCTCTGTCATCGTCGCC 59.618 55.000 0.00 0.00 0.00 5.54
3967 4909 3.317711 AGGTGATCATCTCTGTCATCGTC 59.682 47.826 1.50 0.00 0.00 4.20
3980 4922 2.429610 GCTCCAAAATGCAGGTGATCAT 59.570 45.455 0.00 0.00 0.00 2.45
4178 5122 4.674101 GCGCAAATCATTAGCCAAGTAACA 60.674 41.667 0.30 0.00 0.00 2.41
4299 5992 6.902341 TGTGATTGTTCTCTATTTGCAGAAC 58.098 36.000 7.18 7.18 45.99 3.01
4357 6050 2.643304 GGGTTTCCTTAGGGAGAGTGTT 59.357 50.000 0.00 0.00 43.29 3.32
4372 6065 3.615224 TTGTAGTATGTCCGGGGTTTC 57.385 47.619 0.00 0.00 0.00 2.78
4377 6070 3.934068 ACTTGTTTGTAGTATGTCCGGG 58.066 45.455 0.00 0.00 0.00 5.73
4379 6072 8.013378 CCTTTTAACTTGTTTGTAGTATGTCCG 58.987 37.037 0.00 0.00 0.00 4.79
4389 6082 5.046950 TGCCTGTTCCTTTTAACTTGTTTGT 60.047 36.000 0.00 0.00 0.00 2.83
4461 6155 7.713750 AGATTGCTGATATGACAAAATCCTTG 58.286 34.615 0.00 0.00 0.00 3.61
4711 6421 4.550422 TCATGAGTGACAAGAAGAAGTCG 58.450 43.478 0.00 0.00 37.58 4.18
4759 6469 2.359975 GAAGCTCCCAACCCCACG 60.360 66.667 0.00 0.00 0.00 4.94
4760 6470 1.603739 GTGAAGCTCCCAACCCCAC 60.604 63.158 0.00 0.00 0.00 4.61
4761 6471 2.840753 GGTGAAGCTCCCAACCCCA 61.841 63.158 0.00 0.00 0.00 4.96
4762 6472 2.035783 GGTGAAGCTCCCAACCCC 59.964 66.667 0.00 0.00 0.00 4.95
4763 6473 0.895559 CAAGGTGAAGCTCCCAACCC 60.896 60.000 0.99 0.00 0.00 4.11
4764 6474 0.110486 TCAAGGTGAAGCTCCCAACC 59.890 55.000 0.99 0.52 0.00 3.77
4765 6475 1.815003 CATCAAGGTGAAGCTCCCAAC 59.185 52.381 0.00 0.00 0.00 3.77
4766 6476 1.704628 TCATCAAGGTGAAGCTCCCAA 59.295 47.619 0.00 0.00 0.00 4.12
4767 6477 1.361204 TCATCAAGGTGAAGCTCCCA 58.639 50.000 0.00 0.00 0.00 4.37
4768 6478 2.295885 CATCATCAAGGTGAAGCTCCC 58.704 52.381 0.00 0.00 0.00 4.30
4769 6479 1.674962 GCATCATCAAGGTGAAGCTCC 59.325 52.381 3.50 0.00 39.15 4.70
4770 6480 1.674962 GGCATCATCAAGGTGAAGCTC 59.325 52.381 9.97 0.00 41.26 4.09
4771 6481 1.284198 AGGCATCATCAAGGTGAAGCT 59.716 47.619 9.97 0.00 41.26 3.74
4772 6482 1.760192 AGGCATCATCAAGGTGAAGC 58.240 50.000 2.13 2.13 40.91 3.86
4773 6483 3.349927 TGAAGGCATCATCAAGGTGAAG 58.650 45.455 0.00 0.00 31.50 3.02
4774 6484 3.438216 TGAAGGCATCATCAAGGTGAA 57.562 42.857 0.00 0.00 31.50 3.18
4775 6485 3.054213 TCATGAAGGCATCATCAAGGTGA 60.054 43.478 1.56 0.00 45.91 4.02
4776 6486 3.284617 TCATGAAGGCATCATCAAGGTG 58.715 45.455 1.56 0.00 45.91 4.00
4777 6487 3.657398 TCATGAAGGCATCATCAAGGT 57.343 42.857 1.56 0.00 45.91 3.50
4778 6488 4.569761 CTTCATGAAGGCATCATCAAGG 57.430 45.455 25.14 0.00 45.91 3.61
4790 6500 6.017605 CCCTTATCATCGTTTCCTTCATGAAG 60.018 42.308 25.75 25.75 38.14 3.02
4791 6501 5.822519 CCCTTATCATCGTTTCCTTCATGAA 59.177 40.000 8.12 8.12 0.00 2.57
4792 6502 5.368145 CCCTTATCATCGTTTCCTTCATGA 58.632 41.667 0.00 0.00 0.00 3.07
4793 6503 4.023707 GCCCTTATCATCGTTTCCTTCATG 60.024 45.833 0.00 0.00 0.00 3.07
4794 6504 4.137543 GCCCTTATCATCGTTTCCTTCAT 58.862 43.478 0.00 0.00 0.00 2.57
4795 6505 3.054728 TGCCCTTATCATCGTTTCCTTCA 60.055 43.478 0.00 0.00 0.00 3.02
4796 6506 3.541632 TGCCCTTATCATCGTTTCCTTC 58.458 45.455 0.00 0.00 0.00 3.46
4797 6507 3.644966 TGCCCTTATCATCGTTTCCTT 57.355 42.857 0.00 0.00 0.00 3.36
4798 6508 3.136443 TGATGCCCTTATCATCGTTTCCT 59.864 43.478 0.00 0.00 42.32 3.36
4799 6509 3.476552 TGATGCCCTTATCATCGTTTCC 58.523 45.455 0.00 0.00 42.32 3.13
4807 6517 2.616256 GGCGATGATGATGCCCTTATCA 60.616 50.000 0.00 0.00 43.06 2.15
4808 6518 2.012673 GGCGATGATGATGCCCTTATC 58.987 52.381 0.00 0.00 43.06 1.75
4809 6519 1.676916 CGGCGATGATGATGCCCTTAT 60.677 52.381 0.00 0.00 46.12 1.73
4810 6520 0.320683 CGGCGATGATGATGCCCTTA 60.321 55.000 0.00 0.00 46.12 2.69
4811 6521 1.598962 CGGCGATGATGATGCCCTT 60.599 57.895 0.00 0.00 46.12 3.95
4812 6522 2.031616 CGGCGATGATGATGCCCT 59.968 61.111 0.00 0.00 46.12 5.19
4813 6523 3.052082 CCGGCGATGATGATGCCC 61.052 66.667 9.30 0.00 46.12 5.36
4814 6524 3.730761 GCCGGCGATGATGATGCC 61.731 66.667 12.58 0.00 45.39 4.40
4815 6525 2.667536 AGCCGGCGATGATGATGC 60.668 61.111 23.20 0.00 0.00 3.91
4816 6526 2.031516 GGAGCCGGCGATGATGATG 61.032 63.158 23.20 0.00 0.00 3.07
4817 6527 2.345244 GGAGCCGGCGATGATGAT 59.655 61.111 23.20 0.00 0.00 2.45
4818 6528 4.284860 CGGAGCCGGCGATGATGA 62.285 66.667 23.20 0.00 35.56 2.92
4830 6540 1.372087 CTTCAGTCATTGGCCGGAGC 61.372 60.000 5.05 0.00 38.76 4.70
4831 6541 0.250234 TCTTCAGTCATTGGCCGGAG 59.750 55.000 5.05 0.00 0.00 4.63
4832 6542 0.036388 GTCTTCAGTCATTGGCCGGA 60.036 55.000 5.05 0.00 0.00 5.14
4833 6543 1.026718 GGTCTTCAGTCATTGGCCGG 61.027 60.000 0.00 0.00 0.00 6.13
4834 6544 0.321564 TGGTCTTCAGTCATTGGCCG 60.322 55.000 0.00 0.00 0.00 6.13
4835 6545 1.815003 CTTGGTCTTCAGTCATTGGCC 59.185 52.381 0.00 0.00 0.00 5.36
4836 6546 2.508526 ACTTGGTCTTCAGTCATTGGC 58.491 47.619 0.00 0.00 0.00 4.52
4837 6547 5.067674 TGAAAACTTGGTCTTCAGTCATTGG 59.932 40.000 0.00 0.00 0.00 3.16
4838 6548 5.973565 GTGAAAACTTGGTCTTCAGTCATTG 59.026 40.000 0.00 0.00 30.00 2.82
4839 6549 5.067805 GGTGAAAACTTGGTCTTCAGTCATT 59.932 40.000 0.00 0.00 30.00 2.57
4840 6550 4.580580 GGTGAAAACTTGGTCTTCAGTCAT 59.419 41.667 0.00 0.00 30.00 3.06
4841 6551 3.945285 GGTGAAAACTTGGTCTTCAGTCA 59.055 43.478 0.00 0.00 30.00 3.41
4842 6552 3.315470 GGGTGAAAACTTGGTCTTCAGTC 59.685 47.826 0.00 0.00 30.00 3.51
4843 6553 3.288092 GGGTGAAAACTTGGTCTTCAGT 58.712 45.455 0.00 0.00 30.00 3.41
4844 6554 2.623416 GGGGTGAAAACTTGGTCTTCAG 59.377 50.000 0.00 0.00 30.00 3.02
4845 6555 2.661718 GGGGTGAAAACTTGGTCTTCA 58.338 47.619 0.00 0.00 0.00 3.02
4846 6556 1.607148 CGGGGTGAAAACTTGGTCTTC 59.393 52.381 0.00 0.00 0.00 2.87
4847 6557 1.213430 TCGGGGTGAAAACTTGGTCTT 59.787 47.619 0.00 0.00 0.00 3.01
4848 6558 0.841289 TCGGGGTGAAAACTTGGTCT 59.159 50.000 0.00 0.00 0.00 3.85
4849 6559 1.810755 GATCGGGGTGAAAACTTGGTC 59.189 52.381 0.00 0.00 0.00 4.02
4850 6560 1.546998 GGATCGGGGTGAAAACTTGGT 60.547 52.381 0.00 0.00 0.00 3.67
4851 6561 1.173913 GGATCGGGGTGAAAACTTGG 58.826 55.000 0.00 0.00 0.00 3.61
4852 6562 0.802494 CGGATCGGGGTGAAAACTTG 59.198 55.000 0.00 0.00 0.00 3.16
4853 6563 0.399075 ACGGATCGGGGTGAAAACTT 59.601 50.000 5.18 0.00 0.00 2.66
4854 6564 0.036671 GACGGATCGGGGTGAAAACT 60.037 55.000 5.18 0.00 0.00 2.66
4855 6565 1.022982 GGACGGATCGGGGTGAAAAC 61.023 60.000 5.18 0.00 0.00 2.43
4856 6566 1.196104 AGGACGGATCGGGGTGAAAA 61.196 55.000 5.18 0.00 0.00 2.29
4857 6567 0.324552 TAGGACGGATCGGGGTGAAA 60.325 55.000 5.18 0.00 0.00 2.69
4858 6568 0.324552 TTAGGACGGATCGGGGTGAA 60.325 55.000 5.18 0.00 0.00 3.18
4859 6569 0.754217 CTTAGGACGGATCGGGGTGA 60.754 60.000 5.18 0.00 0.00 4.02
4860 6570 0.754217 TCTTAGGACGGATCGGGGTG 60.754 60.000 5.18 0.00 0.00 4.61
4861 6571 0.032813 TTCTTAGGACGGATCGGGGT 60.033 55.000 5.18 0.00 0.00 4.95
4862 6572 1.117150 TTTCTTAGGACGGATCGGGG 58.883 55.000 5.18 0.00 0.00 5.73
4863 6573 2.288886 GGATTTCTTAGGACGGATCGGG 60.289 54.545 5.18 0.00 0.00 5.14
4864 6574 2.364324 TGGATTTCTTAGGACGGATCGG 59.636 50.000 0.00 0.00 0.00 4.18
4865 6575 3.381949 GTGGATTTCTTAGGACGGATCG 58.618 50.000 0.00 0.00 0.00 3.69
4866 6576 3.388350 AGGTGGATTTCTTAGGACGGATC 59.612 47.826 0.00 0.00 0.00 3.36
4867 6577 3.134804 CAGGTGGATTTCTTAGGACGGAT 59.865 47.826 0.00 0.00 0.00 4.18
4868 6578 2.500098 CAGGTGGATTTCTTAGGACGGA 59.500 50.000 0.00 0.00 0.00 4.69
4869 6579 2.500098 TCAGGTGGATTTCTTAGGACGG 59.500 50.000 0.00 0.00 0.00 4.79
4870 6580 3.887621 TCAGGTGGATTTCTTAGGACG 57.112 47.619 0.00 0.00 0.00 4.79
4871 6581 6.890293 AGTTATCAGGTGGATTTCTTAGGAC 58.110 40.000 0.00 0.00 37.44 3.85
4872 6582 7.037586 ACAAGTTATCAGGTGGATTTCTTAGGA 60.038 37.037 0.00 0.00 37.44 2.94
4873 6583 7.066284 CACAAGTTATCAGGTGGATTTCTTAGG 59.934 40.741 0.00 0.00 37.44 2.69
4874 6584 7.414540 GCACAAGTTATCAGGTGGATTTCTTAG 60.415 40.741 0.00 0.00 37.44 2.18
4875 6585 6.374333 GCACAAGTTATCAGGTGGATTTCTTA 59.626 38.462 0.00 0.00 37.44 2.10
4876 6586 5.183904 GCACAAGTTATCAGGTGGATTTCTT 59.816 40.000 0.00 0.00 37.44 2.52
4877 6587 4.702131 GCACAAGTTATCAGGTGGATTTCT 59.298 41.667 0.00 0.00 37.44 2.52
4878 6588 4.458989 TGCACAAGTTATCAGGTGGATTTC 59.541 41.667 0.00 0.00 37.44 2.17
4879 6589 4.218417 GTGCACAAGTTATCAGGTGGATTT 59.782 41.667 13.17 0.00 37.44 2.17
4880 6590 3.758554 GTGCACAAGTTATCAGGTGGATT 59.241 43.478 13.17 0.00 37.44 3.01
4881 6591 3.009473 AGTGCACAAGTTATCAGGTGGAT 59.991 43.478 21.04 0.00 40.14 3.41
4882 6592 2.371841 AGTGCACAAGTTATCAGGTGGA 59.628 45.455 21.04 0.00 0.00 4.02
4883 6593 2.485426 CAGTGCACAAGTTATCAGGTGG 59.515 50.000 21.04 0.00 0.00 4.61
4884 6594 3.141398 ACAGTGCACAAGTTATCAGGTG 58.859 45.455 21.04 6.19 0.00 4.00
4885 6595 3.071602 AGACAGTGCACAAGTTATCAGGT 59.928 43.478 21.04 0.86 0.00 4.00
4886 6596 3.668447 AGACAGTGCACAAGTTATCAGG 58.332 45.455 21.04 0.00 0.00 3.86
4887 6597 3.366121 CGAGACAGTGCACAAGTTATCAG 59.634 47.826 21.04 11.01 0.00 2.90
4888 6598 3.005367 TCGAGACAGTGCACAAGTTATCA 59.995 43.478 21.04 7.73 0.00 2.15
4889 6599 3.365220 GTCGAGACAGTGCACAAGTTATC 59.635 47.826 21.04 16.26 0.00 1.75
4890 6600 3.318017 GTCGAGACAGTGCACAAGTTAT 58.682 45.455 21.04 9.82 0.00 1.89
4891 6601 2.545113 GGTCGAGACAGTGCACAAGTTA 60.545 50.000 21.04 2.23 0.00 2.24
4892 6602 1.571919 GTCGAGACAGTGCACAAGTT 58.428 50.000 21.04 8.01 0.00 2.66
4893 6603 0.249489 GGTCGAGACAGTGCACAAGT 60.249 55.000 21.04 17.08 0.00 3.16
4894 6604 1.278172 CGGTCGAGACAGTGCACAAG 61.278 60.000 21.04 13.67 0.00 3.16
4895 6605 1.299850 CGGTCGAGACAGTGCACAA 60.300 57.895 21.04 0.00 0.00 3.33
4896 6606 2.335011 CGGTCGAGACAGTGCACA 59.665 61.111 21.04 0.00 0.00 4.57
4897 6607 3.106407 GCGGTCGAGACAGTGCAC 61.106 66.667 9.40 9.40 0.00 4.57
4898 6608 4.357947 GGCGGTCGAGACAGTGCA 62.358 66.667 5.55 0.00 0.00 4.57
4899 6609 3.575351 AAGGCGGTCGAGACAGTGC 62.575 63.158 5.55 5.81 0.00 4.40
4900 6610 1.444553 GAAGGCGGTCGAGACAGTG 60.445 63.158 5.55 0.00 0.00 3.66
4901 6611 1.461091 TTGAAGGCGGTCGAGACAGT 61.461 55.000 5.55 0.00 0.00 3.55
4902 6612 0.319555 TTTGAAGGCGGTCGAGACAG 60.320 55.000 5.55 2.26 0.00 3.51
4903 6613 0.319555 CTTTGAAGGCGGTCGAGACA 60.320 55.000 5.55 0.00 0.00 3.41
4904 6614 1.627550 GCTTTGAAGGCGGTCGAGAC 61.628 60.000 0.00 0.00 0.00 3.36
4905 6615 1.374252 GCTTTGAAGGCGGTCGAGA 60.374 57.895 0.00 0.00 0.00 4.04
4906 6616 2.391389 GGCTTTGAAGGCGGTCGAG 61.391 63.158 1.35 0.00 41.93 4.04
4907 6617 2.358247 GGCTTTGAAGGCGGTCGA 60.358 61.111 1.35 0.00 41.93 4.20
4914 6624 2.747799 GCTAGATCTGGGGCTTTGAAGG 60.748 54.545 5.18 0.00 0.00 3.46
4915 6625 2.570135 GCTAGATCTGGGGCTTTGAAG 58.430 52.381 5.18 0.00 0.00 3.02
4916 6626 1.212935 GGCTAGATCTGGGGCTTTGAA 59.787 52.381 5.18 0.00 0.00 2.69
4917 6627 0.839946 GGCTAGATCTGGGGCTTTGA 59.160 55.000 5.18 0.00 0.00 2.69
4918 6628 0.533755 CGGCTAGATCTGGGGCTTTG 60.534 60.000 5.18 0.00 0.00 2.77
4919 6629 1.832912 CGGCTAGATCTGGGGCTTT 59.167 57.895 5.18 0.00 0.00 3.51
4920 6630 2.812619 GCGGCTAGATCTGGGGCTT 61.813 63.158 5.18 0.00 0.00 4.35
4921 6631 3.237741 GCGGCTAGATCTGGGGCT 61.238 66.667 5.18 0.00 0.00 5.19
4922 6632 4.321966 GGCGGCTAGATCTGGGGC 62.322 72.222 5.18 9.53 0.00 5.80
4923 6633 1.228894 TAGGCGGCTAGATCTGGGG 60.229 63.158 15.70 0.00 0.00 4.96
4924 6634 0.251386 TCTAGGCGGCTAGATCTGGG 60.251 60.000 36.84 16.98 31.64 4.45
4925 6635 1.846007 ATCTAGGCGGCTAGATCTGG 58.154 55.000 40.79 21.28 41.35 3.86
4929 6639 0.681564 CCGGATCTAGGCGGCTAGAT 60.682 60.000 44.29 44.29 46.06 1.98
4930 6640 1.303398 CCGGATCTAGGCGGCTAGA 60.303 63.158 40.33 40.33 39.87 2.43
4931 6641 2.995872 GCCGGATCTAGGCGGCTAG 61.996 68.421 33.84 33.84 45.58 3.42
4932 6642 2.989824 GCCGGATCTAGGCGGCTA 60.990 66.667 21.38 18.65 45.58 3.93
4938 6648 1.067582 GTTGGTCGCCGGATCTAGG 59.932 63.158 5.05 3.81 0.00 3.02
4939 6649 1.067582 GGTTGGTCGCCGGATCTAG 59.932 63.158 5.05 0.00 0.00 2.43
4940 6650 2.777972 CGGTTGGTCGCCGGATCTA 61.778 63.158 5.05 0.00 44.98 1.98
4941 6651 4.143333 CGGTTGGTCGCCGGATCT 62.143 66.667 5.05 0.00 44.98 2.75
4949 6659 3.240606 CTGCTGTTGCGGTTGGTCG 62.241 63.158 0.00 0.00 43.34 4.79
4950 6660 2.639286 CTGCTGTTGCGGTTGGTC 59.361 61.111 0.00 0.00 43.34 4.02
4957 6667 4.332637 GGTGGCACTGCTGTTGCG 62.333 66.667 18.45 0.00 43.34 4.85
4958 6668 4.332637 CGGTGGCACTGCTGTTGC 62.333 66.667 18.45 1.72 40.20 4.17
4959 6669 1.568612 CTACGGTGGCACTGCTGTTG 61.569 60.000 25.87 11.93 0.00 3.33
4960 6670 1.301716 CTACGGTGGCACTGCTGTT 60.302 57.895 25.87 9.38 0.00 3.16
4961 6671 2.343758 CTACGGTGGCACTGCTGT 59.656 61.111 25.87 16.45 0.00 4.40
4962 6672 2.434884 CCTACGGTGGCACTGCTG 60.435 66.667 25.87 17.59 0.00 4.41
4963 6673 2.603473 TCCTACGGTGGCACTGCT 60.603 61.111 25.87 15.19 0.00 4.24
4964 6674 2.125512 CTCCTACGGTGGCACTGC 60.126 66.667 25.87 5.03 0.00 4.40
4965 6675 2.125512 GCTCCTACGGTGGCACTG 60.126 66.667 24.47 24.47 0.00 3.66
4966 6676 3.391382 GGCTCCTACGGTGGCACT 61.391 66.667 18.45 0.40 40.66 4.40
4967 6677 4.468689 GGGCTCCTACGGTGGCAC 62.469 72.222 9.70 9.70 42.34 5.01
4994 6704 2.749044 CGCATTCAGGCAGTGGCT 60.749 61.111 14.51 14.51 40.87 4.75
4995 6705 4.487412 GCGCATTCAGGCAGTGGC 62.487 66.667 9.02 9.02 40.13 5.01
4996 6706 3.818787 GGCGCATTCAGGCAGTGG 61.819 66.667 10.83 0.00 0.00 4.00
4997 6707 3.057548 TGGCGCATTCAGGCAGTG 61.058 61.111 10.83 0.00 39.30 3.66
4998 6708 3.058160 GTGGCGCATTCAGGCAGT 61.058 61.111 10.83 0.00 44.86 4.40
4999 6709 3.818787 GGTGGCGCATTCAGGCAG 61.819 66.667 10.83 0.00 44.86 4.85
5000 6710 4.657408 TGGTGGCGCATTCAGGCA 62.657 61.111 10.83 0.00 42.00 4.75
5001 6711 4.120331 GTGGTGGCGCATTCAGGC 62.120 66.667 10.83 0.00 0.00 4.85
5002 6712 2.360350 AGTGGTGGCGCATTCAGG 60.360 61.111 10.83 0.00 0.00 3.86
5003 6713 2.693762 CCAGTGGTGGCGCATTCAG 61.694 63.158 10.83 0.00 36.89 3.02
5004 6714 2.672651 CCAGTGGTGGCGCATTCA 60.673 61.111 10.83 0.00 36.89 2.57
5005 6715 2.359850 TCCAGTGGTGGCGCATTC 60.360 61.111 10.83 0.00 44.60 2.67
5006 6716 2.360350 CTCCAGTGGTGGCGCATT 60.360 61.111 10.83 0.00 44.60 3.56
5011 6721 4.729918 CCAGGCTCCAGTGGTGGC 62.730 72.222 25.81 25.81 44.60 5.01
5012 6722 4.039092 CCCAGGCTCCAGTGGTGG 62.039 72.222 9.54 9.33 46.63 4.61
5013 6723 2.930019 TCCCAGGCTCCAGTGGTG 60.930 66.667 9.54 8.11 31.17 4.17
5014 6724 2.608988 CTCCCAGGCTCCAGTGGT 60.609 66.667 9.54 0.00 31.17 4.16
5015 6725 3.406200 CCTCCCAGGCTCCAGTGG 61.406 72.222 1.40 1.40 0.00 4.00
5016 6726 2.284921 TCCTCCCAGGCTCCAGTG 60.285 66.667 0.00 0.00 34.61 3.66
5017 6727 2.040278 CTCCTCCCAGGCTCCAGT 59.960 66.667 0.00 0.00 34.61 4.00
5018 6728 2.767496 CCTCCTCCCAGGCTCCAG 60.767 72.222 0.00 0.00 34.61 3.86
5019 6729 4.421554 CCCTCCTCCCAGGCTCCA 62.422 72.222 0.00 0.00 34.61 3.86
5032 6742 3.403558 GGTGGAGTGGGAGCCCTC 61.404 72.222 7.16 3.11 36.94 4.30
5033 6743 3.507143 AAGGTGGAGTGGGAGCCCT 62.507 63.158 7.16 0.00 36.94 5.19
5034 6744 2.936032 AAGGTGGAGTGGGAGCCC 60.936 66.667 0.00 0.00 0.00 5.19
5035 6745 2.352805 CAAGGTGGAGTGGGAGCC 59.647 66.667 0.00 0.00 0.00 4.70
5036 6746 2.360475 GCAAGGTGGAGTGGGAGC 60.360 66.667 0.00 0.00 0.00 4.70
5037 6747 2.067932 TTGGCAAGGTGGAGTGGGAG 62.068 60.000 0.00 0.00 0.00 4.30
5038 6748 1.650242 TTTGGCAAGGTGGAGTGGGA 61.650 55.000 0.00 0.00 0.00 4.37
5039 6749 1.152567 TTTGGCAAGGTGGAGTGGG 60.153 57.895 0.00 0.00 0.00 4.61
5040 6750 1.463553 GGTTTGGCAAGGTGGAGTGG 61.464 60.000 0.00 0.00 0.00 4.00
5041 6751 1.795170 CGGTTTGGCAAGGTGGAGTG 61.795 60.000 0.00 0.00 0.00 3.51
5042 6752 1.528309 CGGTTTGGCAAGGTGGAGT 60.528 57.895 0.00 0.00 0.00 3.85
5043 6753 2.919494 GCGGTTTGGCAAGGTGGAG 61.919 63.158 0.00 0.00 0.00 3.86
5044 6754 2.909965 GCGGTTTGGCAAGGTGGA 60.910 61.111 0.00 0.00 0.00 4.02
5045 6755 4.341502 CGCGGTTTGGCAAGGTGG 62.342 66.667 0.00 0.00 0.00 4.61
5046 6756 3.254014 CTCGCGGTTTGGCAAGGTG 62.254 63.158 6.13 1.25 0.00 4.00
5047 6757 2.978010 CTCGCGGTTTGGCAAGGT 60.978 61.111 6.13 0.00 0.00 3.50
5048 6758 2.668212 TCTCGCGGTTTGGCAAGG 60.668 61.111 6.13 0.00 0.00 3.61
5049 6759 2.863153 CTCTCGCGGTTTGGCAAG 59.137 61.111 6.13 0.00 0.00 4.01
5050 6760 3.353836 GCTCTCGCGGTTTGGCAA 61.354 61.111 6.13 0.00 0.00 4.52
5061 6771 4.637489 CCATCTCGGCGGCTCTCG 62.637 72.222 7.21 0.00 42.76 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.