Multiple sequence alignment - TraesCS3D01G067300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G067300 chr3D 100.000 2684 0 0 1 2684 29813479 29810796 0.000000e+00 4957.0
1 TraesCS3D01G067300 chr3D 86.287 1247 69 50 352 1572 29801576 29800406 0.000000e+00 1262.0
2 TraesCS3D01G067300 chr3D 86.229 1082 49 32 409 1458 29862118 29861105 0.000000e+00 1081.0
3 TraesCS3D01G067300 chr3D 89.257 754 52 15 628 1372 29790154 29789421 0.000000e+00 917.0
4 TraesCS3D01G067300 chr3D 82.625 1036 124 36 372 1376 299744493 299745503 0.000000e+00 865.0
5 TraesCS3D01G067300 chr3D 87.601 371 31 5 1 357 29797107 29796738 1.490000e-112 416.0
6 TraesCS3D01G067300 chr3D 90.312 320 21 7 266 582 29790472 29790160 6.920000e-111 411.0
7 TraesCS3D01G067300 chr3D 93.151 219 15 0 3 221 29794016 29793798 3.330000e-84 322.0
8 TraesCS3D01G067300 chr3D 77.493 351 40 28 1638 1973 299745934 299746260 9.880000e-40 174.0
9 TraesCS3D01G067300 chr3D 93.103 116 5 3 1864 1978 29788768 29788655 1.650000e-37 167.0
10 TraesCS3D01G067300 chr3D 94.444 90 5 0 269 358 29803573 29803484 3.600000e-29 139.0
11 TraesCS3D01G067300 chr3D 89.691 97 8 2 2123 2219 29788385 29788291 3.630000e-24 122.0
12 TraesCS3D01G067300 chr3D 86.325 117 10 6 1976 2088 29852913 29852799 3.630000e-24 122.0
13 TraesCS3D01G067300 chr3B 87.119 2034 110 67 1 1978 50942091 50944028 0.000000e+00 2165.0
14 TraesCS3D01G067300 chr3B 86.434 1091 75 28 336 1398 50655101 50654056 0.000000e+00 1127.0
15 TraesCS3D01G067300 chr3B 86.359 953 74 17 680 1608 50959693 50958773 0.000000e+00 989.0
16 TraesCS3D01G067300 chr3B 87.273 550 33 12 336 867 50960227 50959697 6.400000e-166 593.0
17 TraesCS3D01G067300 chr3B 94.406 286 10 5 1963 2246 51010241 51009960 4.100000e-118 435.0
18 TraesCS3D01G067300 chr3B 87.898 314 15 8 1656 1965 50653536 50653242 5.500000e-92 348.0
19 TraesCS3D01G067300 chr3B 78.571 350 40 25 1638 1973 421531289 421530961 5.860000e-47 198.0
20 TraesCS3D01G067300 chr3B 89.431 123 12 1 2320 2441 473396601 473396723 1.290000e-33 154.0
21 TraesCS3D01G067300 chr3B 88.281 128 14 1 2314 2441 173375805 173375679 4.630000e-33 152.0
22 TraesCS3D01G067300 chr3B 89.333 75 7 1 2525 2599 50992790 50992717 2.850000e-15 93.5
23 TraesCS3D01G067300 chr3B 86.170 94 2 1 2433 2526 51009842 51009760 1.020000e-14 91.6
24 TraesCS3D01G067300 chr3A 84.906 1431 92 62 352 1747 40390722 40389381 0.000000e+00 1332.0
25 TraesCS3D01G067300 chr3A 86.711 1204 67 39 332 1490 40556860 40555705 0.000000e+00 1251.0
26 TraesCS3D01G067300 chr3A 94.182 636 32 2 1484 2115 40555684 40555050 0.000000e+00 965.0
27 TraesCS3D01G067300 chr3A 82.381 1033 124 39 375 1376 436274722 436273717 0.000000e+00 846.0
28 TraesCS3D01G067300 chr3A 88.800 250 16 11 1739 1978 40389358 40389111 2.020000e-76 296.0
29 TraesCS3D01G067300 chr3A 83.796 216 35 0 17 232 747833070 747833285 3.500000e-49 206.0
30 TraesCS3D01G067300 chr3A 83.333 216 36 0 17 232 747828325 747828540 1.630000e-47 200.0
31 TraesCS3D01G067300 chr3A 78.571 350 40 25 1638 1973 436273287 436272959 5.860000e-47 198.0
32 TraesCS3D01G067300 chr3A 98.718 78 1 0 281 358 40390999 40390922 3.600000e-29 139.0
33 TraesCS3D01G067300 chr7B 89.286 728 50 20 677 1391 707946989 707946277 0.000000e+00 887.0
34 TraesCS3D01G067300 chr7B 91.837 490 22 9 1447 1931 707946261 707945785 0.000000e+00 667.0
35 TraesCS3D01G067300 chr7B 83.911 404 25 18 303 680 707947658 707947269 1.530000e-92 350.0
36 TraesCS3D01G067300 chr7B 89.431 123 12 1 2320 2441 355696869 355696747 1.290000e-33 154.0
37 TraesCS3D01G067300 chr6A 86.555 238 31 1 4 240 444687981 444687744 7.370000e-66 261.0
38 TraesCS3D01G067300 chr5A 88.679 212 24 0 1 212 680517172 680516961 2.650000e-65 259.0
39 TraesCS3D01G067300 chr5A 88.281 128 12 3 2320 2446 695434583 695434458 1.660000e-32 150.0
40 TraesCS3D01G067300 chrUn 83.796 216 35 0 17 232 33650285 33650500 3.500000e-49 206.0
41 TraesCS3D01G067300 chrUn 83.796 216 35 0 17 232 184779782 184779997 3.500000e-49 206.0
42 TraesCS3D01G067300 chr6B 93.103 116 8 0 2320 2435 228695266 228695151 1.280000e-38 171.0
43 TraesCS3D01G067300 chr6B 88.060 67 7 1 2619 2684 705176094 705176160 7.970000e-11 78.7
44 TraesCS3D01G067300 chr1D 90.984 122 11 0 2319 2440 106368670 106368549 5.940000e-37 165.0
45 TraesCS3D01G067300 chr1D 95.890 73 1 1 2611 2683 276770724 276770654 1.690000e-22 117.0
46 TraesCS3D01G067300 chr1A 91.453 117 10 0 2320 2436 385891794 385891910 7.690000e-36 161.0
47 TraesCS3D01G067300 chr7A 90.833 120 10 1 2319 2437 20964191 20964310 2.770000e-35 159.0
48 TraesCS3D01G067300 chr5B 90.756 119 11 0 2317 2435 531648771 531648889 2.770000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G067300 chr3D 29810796 29813479 2683 True 4957.000000 4957 100.000000 1 2684 1 chr3D.!!$R1 2683
1 TraesCS3D01G067300 chr3D 29861105 29862118 1013 True 1081.000000 1081 86.229000 409 1458 1 chr3D.!!$R3 1049
2 TraesCS3D01G067300 chr3D 299744493 299746260 1767 False 519.500000 865 80.059000 372 1973 2 chr3D.!!$F1 1601
3 TraesCS3D01G067300 chr3D 29788291 29803573 15282 True 469.500000 1262 90.480750 1 2219 8 chr3D.!!$R4 2218
4 TraesCS3D01G067300 chr3B 50942091 50944028 1937 False 2165.000000 2165 87.119000 1 1978 1 chr3B.!!$F1 1977
5 TraesCS3D01G067300 chr3B 50958773 50960227 1454 True 791.000000 989 86.816000 336 1608 2 chr3B.!!$R5 1272
6 TraesCS3D01G067300 chr3B 50653242 50655101 1859 True 737.500000 1127 87.166000 336 1965 2 chr3B.!!$R4 1629
7 TraesCS3D01G067300 chr3A 40555050 40556860 1810 True 1108.000000 1251 90.446500 332 2115 2 chr3A.!!$R2 1783
8 TraesCS3D01G067300 chr3A 40389111 40390999 1888 True 589.000000 1332 90.808000 281 1978 3 chr3A.!!$R1 1697
9 TraesCS3D01G067300 chr3A 436272959 436274722 1763 True 522.000000 846 80.476000 375 1973 2 chr3A.!!$R3 1598
10 TraesCS3D01G067300 chr7B 707945785 707947658 1873 True 634.666667 887 88.344667 303 1931 3 chr7B.!!$R2 1628

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
373 13423 0.742505 ACATTGCCGATTCCAGCATG 59.257 50.0 0.0 0.0 39.11 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2224 16644 0.034337 GCAACCCCTCACAACGACTA 59.966 55.0 0.0 0.0 0.0 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 9580 3.616956 CCTGTTCAGAGGCTCATAACA 57.383 47.619 24.29 24.29 0.00 2.41
78 9634 1.383523 GCAAGTTGGAGGCCTATGTC 58.616 55.000 4.42 0.00 0.00 3.06
168 9724 1.293498 GTGTGCTGTCTGTCCGGAT 59.707 57.895 7.81 0.00 0.00 4.18
373 13423 0.742505 ACATTGCCGATTCCAGCATG 59.257 50.000 0.00 0.00 39.11 4.06
555 13641 1.649171 GCGACAGAATATATGTCCGCG 59.351 52.381 0.00 0.00 43.36 6.46
560 13646 1.476891 AGAATATATGTCCGCGCCGAT 59.523 47.619 0.00 0.00 0.00 4.18
951 14554 1.549203 GCACATTTCCCCACACATCT 58.451 50.000 0.00 0.00 0.00 2.90
1036 14656 2.512692 AGCATTAGCATCACCACCAA 57.487 45.000 0.00 0.00 45.49 3.67
1041 14661 0.767998 TAGCATCACCACCAACACCA 59.232 50.000 0.00 0.00 0.00 4.17
1042 14662 0.823356 AGCATCACCACCAACACCAC 60.823 55.000 0.00 0.00 0.00 4.16
1043 14663 1.805428 GCATCACCACCAACACCACC 61.805 60.000 0.00 0.00 0.00 4.61
1045 14665 2.366153 ATCACCACCAACACCACCCC 62.366 60.000 0.00 0.00 0.00 4.95
1046 14666 3.828023 ACCACCAACACCACCCCC 61.828 66.667 0.00 0.00 0.00 5.40
1047 14667 3.507713 CCACCAACACCACCCCCT 61.508 66.667 0.00 0.00 0.00 4.79
1048 14668 2.606449 CACCAACACCACCCCCTT 59.394 61.111 0.00 0.00 0.00 3.95
1049 14669 1.721093 CCACCAACACCACCCCCTTA 61.721 60.000 0.00 0.00 0.00 2.69
1059 14686 0.609131 CACCCCCTTAACTGCCAGTG 60.609 60.000 0.00 0.00 0.00 3.66
1101 14737 1.079127 TGCCTGCGCTTAGACTTCC 60.079 57.895 9.73 0.00 35.36 3.46
1103 14739 0.673644 GCCTGCGCTTAGACTTCCAA 60.674 55.000 9.73 0.00 0.00 3.53
1104 14740 1.363744 CCTGCGCTTAGACTTCCAAG 58.636 55.000 9.73 0.00 0.00 3.61
1105 14741 0.723981 CTGCGCTTAGACTTCCAAGC 59.276 55.000 9.73 0.00 42.98 4.01
1107 14743 1.270839 TGCGCTTAGACTTCCAAGCTT 60.271 47.619 9.73 0.00 43.99 3.74
1108 14744 1.129437 GCGCTTAGACTTCCAAGCTTG 59.871 52.381 19.93 19.93 43.99 4.01
1109 14745 1.129437 CGCTTAGACTTCCAAGCTTGC 59.871 52.381 21.43 6.92 43.99 4.01
1110 14746 1.129437 GCTTAGACTTCCAAGCTTGCG 59.871 52.381 21.43 14.02 43.07 4.85
1111 14747 2.688507 CTTAGACTTCCAAGCTTGCGA 58.311 47.619 21.43 16.08 0.00 5.10
1112 14748 3.265791 CTTAGACTTCCAAGCTTGCGAT 58.734 45.455 21.43 5.71 0.00 4.58
1115 14751 2.227388 AGACTTCCAAGCTTGCGATTTG 59.773 45.455 21.43 13.58 0.00 2.32
1128 14773 1.268234 GCGATTTGCCTGCATACTCAC 60.268 52.381 0.00 0.00 37.76 3.51
1148 14793 2.124736 TAGCTTGTCATGGCGCCC 60.125 61.111 26.77 9.02 0.00 6.13
1163 14808 2.802792 CCCGCGTCGAAGGTCATA 59.197 61.111 4.92 0.00 0.00 2.15
1164 14809 1.299165 CCCGCGTCGAAGGTCATAG 60.299 63.158 4.92 0.00 0.00 2.23
1173 14824 0.535335 GAAGGTCATAGGCCACGTCA 59.465 55.000 5.01 0.00 0.00 4.35
1176 14827 0.464036 GGTCATAGGCCACGTCATCA 59.536 55.000 5.01 0.00 0.00 3.07
1414 15324 1.644509 TATGAGGCAGTGAGGTGTGT 58.355 50.000 0.00 0.00 0.00 3.72
1494 15449 4.327982 TGCTCAGTTTAGCTATGCCTAG 57.672 45.455 0.00 0.00 43.19 3.02
1511 15466 2.291190 CCTAGCTAGTTGCCTACTCGTC 59.709 54.545 19.31 0.00 44.23 4.20
1611 15594 3.616219 TCACTGCCTTACTGTTTGTGTT 58.384 40.909 0.00 0.00 0.00 3.32
1681 15838 2.224744 TGGCATAGACTTTTGGTGCTCA 60.225 45.455 0.00 0.00 36.15 4.26
1747 15906 5.422145 GCCAGCTATCCAATTTCATTTTGT 58.578 37.500 0.00 0.00 0.00 2.83
1806 16054 4.160439 ACAAATCTTCTCAGGCTACGATCA 59.840 41.667 0.00 0.00 0.00 2.92
1980 16316 7.742151 TGCTACTATTTGCATATAAGCATTCG 58.258 34.615 15.40 0.00 45.19 3.34
2022 16358 1.757118 TCGATAAGAAGCTCCTGGGTG 59.243 52.381 0.00 0.00 0.00 4.61
2129 16515 8.383318 AGTTATTATAGCTGCGTTGATCATTT 57.617 30.769 0.00 0.00 0.00 2.32
2130 16516 8.285394 AGTTATTATAGCTGCGTTGATCATTTG 58.715 33.333 0.00 0.00 0.00 2.32
2131 16517 3.976793 ATAGCTGCGTTGATCATTTGG 57.023 42.857 0.00 0.00 0.00 3.28
2132 16518 1.825090 AGCTGCGTTGATCATTTGGA 58.175 45.000 0.00 0.00 0.00 3.53
2133 16519 2.372264 AGCTGCGTTGATCATTTGGAT 58.628 42.857 0.00 0.00 39.53 3.41
2134 16520 3.544684 AGCTGCGTTGATCATTTGGATA 58.455 40.909 0.00 0.00 36.00 2.59
2135 16521 4.139786 AGCTGCGTTGATCATTTGGATAT 58.860 39.130 0.00 0.00 36.00 1.63
2136 16522 4.023450 AGCTGCGTTGATCATTTGGATATG 60.023 41.667 0.00 0.00 36.00 1.78
2138 16524 5.734220 GCTGCGTTGATCATTTGGATATGTT 60.734 40.000 0.00 0.00 36.00 2.71
2139 16525 5.820131 TGCGTTGATCATTTGGATATGTTC 58.180 37.500 0.00 0.00 36.00 3.18
2140 16526 5.356470 TGCGTTGATCATTTGGATATGTTCA 59.644 36.000 0.00 0.00 36.00 3.18
2150 16570 9.013229 TCATTTGGATATGTTCATGGCTATTAC 57.987 33.333 0.00 0.00 0.00 1.89
2173 16593 3.119849 ACAGATGAAAATAAGCGCCACAC 60.120 43.478 2.29 0.00 0.00 3.82
2184 16604 2.902419 CGCCACACGCACAATTGGA 61.902 57.895 10.83 0.00 37.30 3.53
2187 16607 0.733566 CCACACGCACAATTGGATGC 60.734 55.000 10.83 10.50 38.52 3.91
2221 16641 3.814577 ACATGTAGTGTGCGTCTCC 57.185 52.632 0.00 0.00 40.28 3.71
2222 16642 1.257743 ACATGTAGTGTGCGTCTCCT 58.742 50.000 0.00 0.00 40.28 3.69
2223 16643 1.618837 ACATGTAGTGTGCGTCTCCTT 59.381 47.619 0.00 0.00 40.28 3.36
2224 16644 2.037251 ACATGTAGTGTGCGTCTCCTTT 59.963 45.455 0.00 0.00 40.28 3.11
2225 16645 3.257375 ACATGTAGTGTGCGTCTCCTTTA 59.743 43.478 0.00 0.00 40.28 1.85
2226 16646 3.570926 TGTAGTGTGCGTCTCCTTTAG 57.429 47.619 0.00 0.00 0.00 1.85
2227 16647 2.889045 TGTAGTGTGCGTCTCCTTTAGT 59.111 45.455 0.00 0.00 0.00 2.24
2228 16648 2.726832 AGTGTGCGTCTCCTTTAGTC 57.273 50.000 0.00 0.00 0.00 2.59
2229 16649 1.068472 AGTGTGCGTCTCCTTTAGTCG 60.068 52.381 0.00 0.00 39.38 4.18
2230 16650 0.956633 TGTGCGTCTCCTTTAGTCGT 59.043 50.000 0.00 0.00 38.73 4.34
2231 16651 1.338973 TGTGCGTCTCCTTTAGTCGTT 59.661 47.619 0.00 0.00 38.73 3.85
2232 16652 1.719780 GTGCGTCTCCTTTAGTCGTTG 59.280 52.381 0.00 0.00 38.73 4.10
2233 16653 1.338973 TGCGTCTCCTTTAGTCGTTGT 59.661 47.619 0.00 0.00 38.73 3.32
2234 16654 1.719780 GCGTCTCCTTTAGTCGTTGTG 59.280 52.381 0.00 0.00 38.73 3.33
2235 16655 2.606308 GCGTCTCCTTTAGTCGTTGTGA 60.606 50.000 0.00 0.00 38.73 3.58
2236 16656 3.235195 CGTCTCCTTTAGTCGTTGTGAG 58.765 50.000 0.00 0.00 32.92 3.51
2237 16657 3.576648 GTCTCCTTTAGTCGTTGTGAGG 58.423 50.000 0.00 0.00 0.00 3.86
2238 16658 2.561419 TCTCCTTTAGTCGTTGTGAGGG 59.439 50.000 0.00 0.00 0.00 4.30
2239 16659 1.621814 TCCTTTAGTCGTTGTGAGGGG 59.378 52.381 0.00 0.00 0.00 4.79
2240 16660 1.346722 CCTTTAGTCGTTGTGAGGGGT 59.653 52.381 0.00 0.00 0.00 4.95
2241 16661 2.224450 CCTTTAGTCGTTGTGAGGGGTT 60.224 50.000 0.00 0.00 0.00 4.11
2242 16662 2.536761 TTAGTCGTTGTGAGGGGTTG 57.463 50.000 0.00 0.00 0.00 3.77
2243 16663 0.034337 TAGTCGTTGTGAGGGGTTGC 59.966 55.000 0.00 0.00 0.00 4.17
2244 16664 1.227853 GTCGTTGTGAGGGGTTGCT 60.228 57.895 0.00 0.00 0.00 3.91
2245 16665 0.034337 GTCGTTGTGAGGGGTTGCTA 59.966 55.000 0.00 0.00 0.00 3.49
2246 16666 0.034337 TCGTTGTGAGGGGTTGCTAC 59.966 55.000 0.00 0.00 0.00 3.58
2247 16667 0.250124 CGTTGTGAGGGGTTGCTACA 60.250 55.000 0.00 0.00 0.00 2.74
2248 16668 1.235724 GTTGTGAGGGGTTGCTACAC 58.764 55.000 0.00 0.00 0.00 2.90
2249 16669 0.840617 TTGTGAGGGGTTGCTACACA 59.159 50.000 2.28 0.00 39.22 3.72
2250 16670 0.396435 TGTGAGGGGTTGCTACACAG 59.604 55.000 2.28 0.00 36.72 3.66
2251 16671 0.321653 GTGAGGGGTTGCTACACAGG 60.322 60.000 2.28 0.00 0.00 4.00
2252 16672 1.299976 GAGGGGTTGCTACACAGGG 59.700 63.158 2.28 0.00 0.00 4.45
2253 16673 1.151899 AGGGGTTGCTACACAGGGA 60.152 57.895 2.28 0.00 0.00 4.20
2254 16674 0.550147 AGGGGTTGCTACACAGGGAT 60.550 55.000 2.28 0.00 0.00 3.85
2255 16675 0.394352 GGGGTTGCTACACAGGGATG 60.394 60.000 2.28 0.00 0.00 3.51
2256 16676 0.618458 GGGTTGCTACACAGGGATGA 59.382 55.000 0.00 0.00 0.00 2.92
2257 16677 1.212935 GGGTTGCTACACAGGGATGAT 59.787 52.381 0.00 0.00 0.00 2.45
2258 16678 2.292267 GGTTGCTACACAGGGATGATG 58.708 52.381 0.00 0.00 0.00 3.07
2259 16679 2.356125 GGTTGCTACACAGGGATGATGT 60.356 50.000 0.00 0.00 0.00 3.06
2260 16680 3.118408 GGTTGCTACACAGGGATGATGTA 60.118 47.826 0.00 0.00 0.00 2.29
2261 16681 4.444876 GGTTGCTACACAGGGATGATGTAT 60.445 45.833 0.00 0.00 0.00 2.29
2262 16682 4.341366 TGCTACACAGGGATGATGTATG 57.659 45.455 0.00 0.00 0.00 2.39
2263 16683 3.711190 TGCTACACAGGGATGATGTATGT 59.289 43.478 0.00 0.00 0.00 2.29
2264 16684 4.898861 TGCTACACAGGGATGATGTATGTA 59.101 41.667 0.00 0.00 0.00 2.29
2265 16685 5.365314 TGCTACACAGGGATGATGTATGTAA 59.635 40.000 0.00 0.00 0.00 2.41
2266 16686 6.043127 TGCTACACAGGGATGATGTATGTAAT 59.957 38.462 0.00 0.00 0.00 1.89
2267 16687 7.234577 TGCTACACAGGGATGATGTATGTAATA 59.765 37.037 0.00 0.00 0.00 0.98
2268 16688 7.761704 GCTACACAGGGATGATGTATGTAATAG 59.238 40.741 0.00 0.00 0.00 1.73
2269 16689 6.467677 ACACAGGGATGATGTATGTAATAGC 58.532 40.000 0.00 0.00 0.00 2.97
2270 16690 6.270927 ACACAGGGATGATGTATGTAATAGCT 59.729 38.462 0.00 0.00 0.00 3.32
2271 16691 6.815641 CACAGGGATGATGTATGTAATAGCTC 59.184 42.308 0.00 0.00 0.00 4.09
2272 16692 6.038985 CAGGGATGATGTATGTAATAGCTCG 58.961 44.000 0.00 0.00 0.00 5.03
2273 16693 5.952347 AGGGATGATGTATGTAATAGCTCGA 59.048 40.000 0.00 0.00 0.00 4.04
2274 16694 6.037098 GGGATGATGTATGTAATAGCTCGAC 58.963 44.000 0.00 0.00 0.00 4.20
2275 16695 6.037098 GGATGATGTATGTAATAGCTCGACC 58.963 44.000 0.00 0.00 0.00 4.79
2276 16696 6.350194 GGATGATGTATGTAATAGCTCGACCA 60.350 42.308 0.00 0.00 0.00 4.02
2277 16697 6.590234 TGATGTATGTAATAGCTCGACCAT 57.410 37.500 0.00 0.00 0.00 3.55
2278 16698 6.993079 TGATGTATGTAATAGCTCGACCATT 58.007 36.000 0.00 0.00 0.00 3.16
2279 16699 6.868339 TGATGTATGTAATAGCTCGACCATTG 59.132 38.462 0.00 0.00 0.00 2.82
2280 16700 4.988540 TGTATGTAATAGCTCGACCATTGC 59.011 41.667 0.00 0.00 0.00 3.56
2281 16701 3.535280 TGTAATAGCTCGACCATTGCA 57.465 42.857 0.00 0.00 0.00 4.08
2282 16702 4.071961 TGTAATAGCTCGACCATTGCAT 57.928 40.909 0.00 0.00 0.00 3.96
2283 16703 4.058124 TGTAATAGCTCGACCATTGCATC 58.942 43.478 0.00 0.00 0.00 3.91
2284 16704 2.175878 ATAGCTCGACCATTGCATCC 57.824 50.000 0.00 0.00 0.00 3.51
2285 16705 1.123077 TAGCTCGACCATTGCATCCT 58.877 50.000 0.00 0.00 0.00 3.24
2286 16706 0.179062 AGCTCGACCATTGCATCCTC 60.179 55.000 0.00 0.00 0.00 3.71
2287 16707 1.162800 GCTCGACCATTGCATCCTCC 61.163 60.000 0.00 0.00 0.00 4.30
2288 16708 0.467384 CTCGACCATTGCATCCTCCT 59.533 55.000 0.00 0.00 0.00 3.69
2289 16709 0.911769 TCGACCATTGCATCCTCCTT 59.088 50.000 0.00 0.00 0.00 3.36
2290 16710 1.281867 TCGACCATTGCATCCTCCTTT 59.718 47.619 0.00 0.00 0.00 3.11
2291 16711 1.402968 CGACCATTGCATCCTCCTTTG 59.597 52.381 0.00 0.00 0.00 2.77
2292 16712 2.450476 GACCATTGCATCCTCCTTTGT 58.550 47.619 0.00 0.00 0.00 2.83
2293 16713 2.827921 GACCATTGCATCCTCCTTTGTT 59.172 45.455 0.00 0.00 0.00 2.83
2294 16714 2.564062 ACCATTGCATCCTCCTTTGTTG 59.436 45.455 0.00 0.00 0.00 3.33
2295 16715 2.613691 CATTGCATCCTCCTTTGTTGC 58.386 47.619 0.00 0.00 0.00 4.17
2296 16716 0.968405 TTGCATCCTCCTTTGTTGCC 59.032 50.000 0.00 0.00 32.39 4.52
2297 16717 0.178967 TGCATCCTCCTTTGTTGCCA 60.179 50.000 0.00 0.00 32.39 4.92
2298 16718 1.188863 GCATCCTCCTTTGTTGCCAT 58.811 50.000 0.00 0.00 0.00 4.40
2299 16719 1.551883 GCATCCTCCTTTGTTGCCATT 59.448 47.619 0.00 0.00 0.00 3.16
2300 16720 2.027837 GCATCCTCCTTTGTTGCCATTT 60.028 45.455 0.00 0.00 0.00 2.32
2301 16721 3.853475 CATCCTCCTTTGTTGCCATTTC 58.147 45.455 0.00 0.00 0.00 2.17
2302 16722 2.247358 TCCTCCTTTGTTGCCATTTCC 58.753 47.619 0.00 0.00 0.00 3.13
2303 16723 1.276138 CCTCCTTTGTTGCCATTTCCC 59.724 52.381 0.00 0.00 0.00 3.97
2304 16724 1.276138 CTCCTTTGTTGCCATTTCCCC 59.724 52.381 0.00 0.00 0.00 4.81
2305 16725 1.055040 CCTTTGTTGCCATTTCCCCA 58.945 50.000 0.00 0.00 0.00 4.96
2306 16726 1.629861 CCTTTGTTGCCATTTCCCCAT 59.370 47.619 0.00 0.00 0.00 4.00
2307 16727 2.355007 CCTTTGTTGCCATTTCCCCATC 60.355 50.000 0.00 0.00 0.00 3.51
2308 16728 0.894141 TTGTTGCCATTTCCCCATCG 59.106 50.000 0.00 0.00 0.00 3.84
2309 16729 0.038890 TGTTGCCATTTCCCCATCGA 59.961 50.000 0.00 0.00 0.00 3.59
2310 16730 1.341877 TGTTGCCATTTCCCCATCGAT 60.342 47.619 0.00 0.00 0.00 3.59
2311 16731 1.756538 GTTGCCATTTCCCCATCGATT 59.243 47.619 0.00 0.00 0.00 3.34
2312 16732 2.955660 GTTGCCATTTCCCCATCGATTA 59.044 45.455 0.00 0.00 0.00 1.75
2313 16733 3.524095 TGCCATTTCCCCATCGATTAT 57.476 42.857 0.00 0.00 0.00 1.28
2314 16734 3.843422 TGCCATTTCCCCATCGATTATT 58.157 40.909 0.00 0.00 0.00 1.40
2315 16735 4.991776 TGCCATTTCCCCATCGATTATTA 58.008 39.130 0.00 0.00 0.00 0.98
2316 16736 5.579047 TGCCATTTCCCCATCGATTATTAT 58.421 37.500 0.00 0.00 0.00 1.28
2317 16737 6.015918 TGCCATTTCCCCATCGATTATTATT 58.984 36.000 0.00 0.00 0.00 1.40
2318 16738 6.071447 TGCCATTTCCCCATCGATTATTATTG 60.071 38.462 0.00 0.00 0.00 1.90
2319 16739 6.071391 GCCATTTCCCCATCGATTATTATTGT 60.071 38.462 0.00 0.00 0.00 2.71
2320 16740 7.122055 GCCATTTCCCCATCGATTATTATTGTA 59.878 37.037 0.00 0.00 0.00 2.41
2321 16741 8.458843 CCATTTCCCCATCGATTATTATTGTAC 58.541 37.037 0.00 0.00 0.00 2.90
2322 16742 9.231297 CATTTCCCCATCGATTATTATTGTACT 57.769 33.333 0.00 0.00 0.00 2.73
2323 16743 8.842358 TTTCCCCATCGATTATTATTGTACTC 57.158 34.615 0.00 0.00 0.00 2.59
2324 16744 7.792364 TCCCCATCGATTATTATTGTACTCT 57.208 36.000 0.00 0.00 0.00 3.24
2325 16745 7.837863 TCCCCATCGATTATTATTGTACTCTC 58.162 38.462 0.00 0.00 0.00 3.20
2326 16746 7.674348 TCCCCATCGATTATTATTGTACTCTCT 59.326 37.037 0.00 0.00 0.00 3.10
2327 16747 7.976734 CCCCATCGATTATTATTGTACTCTCTC 59.023 40.741 0.00 0.00 0.00 3.20
2328 16748 7.976734 CCCATCGATTATTATTGTACTCTCTCC 59.023 40.741 0.00 0.00 0.00 3.71
2329 16749 7.698550 CCATCGATTATTATTGTACTCTCTCCG 59.301 40.741 0.00 0.00 0.00 4.63
2330 16750 7.741027 TCGATTATTATTGTACTCTCTCCGT 57.259 36.000 0.00 0.00 0.00 4.69
2331 16751 7.804712 TCGATTATTATTGTACTCTCTCCGTC 58.195 38.462 0.00 0.00 0.00 4.79
2332 16752 7.022384 CGATTATTATTGTACTCTCTCCGTCC 58.978 42.308 0.00 0.00 0.00 4.79
2333 16753 4.832590 ATTATTGTACTCTCTCCGTCCG 57.167 45.455 0.00 0.00 0.00 4.79
2334 16754 1.390565 ATTGTACTCTCTCCGTCCGG 58.609 55.000 0.00 0.00 0.00 5.14
2335 16755 0.325933 TTGTACTCTCTCCGTCCGGA 59.674 55.000 0.00 0.00 42.90 5.14
2336 16756 0.325933 TGTACTCTCTCCGTCCGGAA 59.674 55.000 5.23 0.00 44.66 4.30
2337 16757 1.271543 TGTACTCTCTCCGTCCGGAAA 60.272 52.381 5.23 0.00 44.66 3.13
2338 16758 2.022934 GTACTCTCTCCGTCCGGAAAT 58.977 52.381 5.23 0.00 44.66 2.17
2339 16759 2.431954 ACTCTCTCCGTCCGGAAATA 57.568 50.000 5.23 0.00 44.66 1.40
2340 16760 2.022934 ACTCTCTCCGTCCGGAAATAC 58.977 52.381 5.23 0.00 44.66 1.89
2341 16761 2.299521 CTCTCTCCGTCCGGAAATACT 58.700 52.381 5.23 0.00 44.66 2.12
2342 16762 2.688958 CTCTCTCCGTCCGGAAATACTT 59.311 50.000 5.23 0.00 44.66 2.24
2343 16763 3.094572 TCTCTCCGTCCGGAAATACTTT 58.905 45.455 5.23 0.00 44.66 2.66
2344 16764 3.512724 TCTCTCCGTCCGGAAATACTTTT 59.487 43.478 5.23 0.00 44.66 2.27
2345 16765 3.853475 TCTCCGTCCGGAAATACTTTTC 58.147 45.455 5.23 0.00 44.66 2.29
2346 16766 3.512724 TCTCCGTCCGGAAATACTTTTCT 59.487 43.478 5.23 0.00 44.66 2.52
2347 16767 4.020839 TCTCCGTCCGGAAATACTTTTCTT 60.021 41.667 5.23 0.00 44.66 2.52
2348 16768 5.185635 TCTCCGTCCGGAAATACTTTTCTTA 59.814 40.000 5.23 0.00 44.66 2.10
2349 16769 5.413499 TCCGTCCGGAAATACTTTTCTTAG 58.587 41.667 5.23 0.00 42.05 2.18
2350 16770 4.569564 CCGTCCGGAAATACTTTTCTTAGG 59.430 45.833 5.23 1.73 40.91 2.69
2351 16771 5.413499 CGTCCGGAAATACTTTTCTTAGGA 58.587 41.667 5.23 3.63 40.91 2.94
2352 16772 5.870978 CGTCCGGAAATACTTTTCTTAGGAA 59.129 40.000 5.23 0.00 40.91 3.36
2353 16773 6.537660 CGTCCGGAAATACTTTTCTTAGGAAT 59.462 38.462 5.23 0.00 40.91 3.01
2354 16774 7.465513 CGTCCGGAAATACTTTTCTTAGGAATG 60.466 40.741 5.23 0.00 40.91 2.67
2355 16775 6.826741 TCCGGAAATACTTTTCTTAGGAATGG 59.173 38.462 0.00 0.00 40.91 3.16
2356 16776 6.602009 CCGGAAATACTTTTCTTAGGAATGGT 59.398 38.462 0.00 0.00 40.91 3.55
2357 16777 7.122204 CCGGAAATACTTTTCTTAGGAATGGTT 59.878 37.037 0.00 0.00 40.91 3.67
2358 16778 7.968405 CGGAAATACTTTTCTTAGGAATGGTTG 59.032 37.037 0.00 0.00 40.91 3.77
2359 16779 8.803235 GGAAATACTTTTCTTAGGAATGGTTGT 58.197 33.333 0.00 0.00 40.91 3.32
2365 16785 9.892130 ACTTTTCTTAGGAATGGTTGTATCTAG 57.108 33.333 0.00 0.00 0.00 2.43
2367 16787 9.886132 TTTTCTTAGGAATGGTTGTATCTAGAC 57.114 33.333 0.00 0.00 0.00 2.59
2368 16788 8.840200 TTCTTAGGAATGGTTGTATCTAGACT 57.160 34.615 0.00 0.00 0.00 3.24
2369 16789 8.840200 TCTTAGGAATGGTTGTATCTAGACTT 57.160 34.615 0.00 0.00 0.00 3.01
2370 16790 9.931698 TCTTAGGAATGGTTGTATCTAGACTTA 57.068 33.333 0.00 0.00 0.00 2.24
2422 16842 8.624367 TCCATTTTTAGGACAAGTATTTTCGA 57.376 30.769 0.00 0.00 0.00 3.71
2423 16843 9.069082 TCCATTTTTAGGACAAGTATTTTCGAA 57.931 29.630 0.00 0.00 0.00 3.71
2424 16844 9.124807 CCATTTTTAGGACAAGTATTTTCGAAC 57.875 33.333 0.00 0.00 0.00 3.95
2425 16845 9.672086 CATTTTTAGGACAAGTATTTTCGAACA 57.328 29.630 0.00 0.00 0.00 3.18
2426 16846 9.893305 ATTTTTAGGACAAGTATTTTCGAACAG 57.107 29.630 0.00 0.00 0.00 3.16
2427 16847 8.665643 TTTTAGGACAAGTATTTTCGAACAGA 57.334 30.769 0.00 0.00 0.00 3.41
2428 16848 7.884816 TTAGGACAAGTATTTTCGAACAGAG 57.115 36.000 0.00 0.00 0.00 3.35
2429 16849 5.238583 AGGACAAGTATTTTCGAACAGAGG 58.761 41.667 0.00 0.00 0.00 3.69
2430 16850 5.011738 AGGACAAGTATTTTCGAACAGAGGA 59.988 40.000 0.00 0.00 0.00 3.71
2431 16851 5.699458 GGACAAGTATTTTCGAACAGAGGAA 59.301 40.000 0.00 0.00 0.00 3.36
2432 16852 6.128526 GGACAAGTATTTTCGAACAGAGGAAG 60.129 42.308 0.00 0.00 0.00 3.46
2433 16853 6.289064 ACAAGTATTTTCGAACAGAGGAAGT 58.711 36.000 0.00 0.00 0.00 3.01
2434 16854 7.439381 ACAAGTATTTTCGAACAGAGGAAGTA 58.561 34.615 0.00 0.00 0.00 2.24
2435 16855 8.095169 ACAAGTATTTTCGAACAGAGGAAGTAT 58.905 33.333 0.00 0.00 0.00 2.12
2436 16856 9.582431 CAAGTATTTTCGAACAGAGGAAGTATA 57.418 33.333 0.00 0.00 0.00 1.47
2444 16864 9.720769 TTCGAACAGAGGAAGTATAATTTTTCT 57.279 29.630 0.00 0.00 0.00 2.52
2445 16865 9.720769 TCGAACAGAGGAAGTATAATTTTTCTT 57.279 29.630 0.00 0.00 0.00 2.52
2446 16866 9.974750 CGAACAGAGGAAGTATAATTTTTCTTC 57.025 33.333 6.70 6.70 36.54 2.87
2447 16867 9.974750 GAACAGAGGAAGTATAATTTTTCTTCG 57.025 33.333 8.43 0.47 37.67 3.79
2448 16868 9.720769 AACAGAGGAAGTATAATTTTTCTTCGA 57.279 29.630 8.43 0.00 37.67 3.71
2449 16869 9.152595 ACAGAGGAAGTATAATTTTTCTTCGAC 57.847 33.333 8.43 6.02 37.67 4.20
2450 16870 9.151471 CAGAGGAAGTATAATTTTTCTTCGACA 57.849 33.333 8.43 0.00 37.67 4.35
2451 16871 9.720769 AGAGGAAGTATAATTTTTCTTCGACAA 57.279 29.630 8.43 0.00 37.67 3.18
2469 16889 5.881777 GACAAAGAGTCAAAGGGTAATCC 57.118 43.478 0.00 0.00 46.77 3.01
2470 16890 5.313712 GACAAAGAGTCAAAGGGTAATCCA 58.686 41.667 0.00 0.00 46.77 3.41
2471 16891 5.316987 ACAAAGAGTCAAAGGGTAATCCAG 58.683 41.667 0.00 0.00 38.24 3.86
2472 16892 5.163088 ACAAAGAGTCAAAGGGTAATCCAGT 60.163 40.000 0.00 0.00 38.24 4.00
2473 16893 5.584551 AAGAGTCAAAGGGTAATCCAGTT 57.415 39.130 0.00 0.00 38.24 3.16
2474 16894 6.697641 AAGAGTCAAAGGGTAATCCAGTTA 57.302 37.500 0.00 0.00 38.24 2.24
2475 16895 6.893020 AGAGTCAAAGGGTAATCCAGTTAT 57.107 37.500 0.00 0.00 38.24 1.89
2476 16896 7.272144 AGAGTCAAAGGGTAATCCAGTTATT 57.728 36.000 0.00 0.00 38.24 1.40
2477 16897 7.112779 AGAGTCAAAGGGTAATCCAGTTATTG 58.887 38.462 0.00 0.00 38.24 1.90
2478 16898 6.790319 AGTCAAAGGGTAATCCAGTTATTGT 58.210 36.000 0.00 0.00 38.24 2.71
2479 16899 6.884836 AGTCAAAGGGTAATCCAGTTATTGTC 59.115 38.462 0.00 0.00 38.24 3.18
2480 16900 6.657541 GTCAAAGGGTAATCCAGTTATTGTCA 59.342 38.462 0.00 0.00 38.24 3.58
2481 16901 7.339466 GTCAAAGGGTAATCCAGTTATTGTCAT 59.661 37.037 0.00 0.00 38.24 3.06
2482 16902 7.339212 TCAAAGGGTAATCCAGTTATTGTCATG 59.661 37.037 0.00 0.00 38.24 3.07
2483 16903 6.327386 AGGGTAATCCAGTTATTGTCATGT 57.673 37.500 0.00 0.00 38.24 3.21
2484 16904 7.446106 AGGGTAATCCAGTTATTGTCATGTA 57.554 36.000 0.00 0.00 38.24 2.29
2485 16905 7.509546 AGGGTAATCCAGTTATTGTCATGTAG 58.490 38.462 0.00 0.00 38.24 2.74
2486 16906 6.204882 GGGTAATCCAGTTATTGTCATGTAGC 59.795 42.308 0.00 0.00 35.00 3.58
2487 16907 6.765989 GGTAATCCAGTTATTGTCATGTAGCA 59.234 38.462 0.00 0.00 0.00 3.49
2488 16908 6.932356 AATCCAGTTATTGTCATGTAGCAG 57.068 37.500 0.00 0.00 0.00 4.24
2489 16909 4.191544 TCCAGTTATTGTCATGTAGCAGC 58.808 43.478 0.00 0.00 0.00 5.25
2490 16910 3.940852 CCAGTTATTGTCATGTAGCAGCA 59.059 43.478 0.00 0.00 0.00 4.41
2491 16911 4.577693 CCAGTTATTGTCATGTAGCAGCAT 59.422 41.667 0.00 0.00 0.00 3.79
2492 16912 5.066893 CCAGTTATTGTCATGTAGCAGCATT 59.933 40.000 0.00 0.00 0.00 3.56
2493 16913 6.405065 CCAGTTATTGTCATGTAGCAGCATTT 60.405 38.462 0.00 0.00 0.00 2.32
2494 16914 6.471198 CAGTTATTGTCATGTAGCAGCATTTG 59.529 38.462 0.00 0.00 0.00 2.32
2495 16915 6.375174 AGTTATTGTCATGTAGCAGCATTTGA 59.625 34.615 0.00 0.00 0.00 2.69
2496 16916 5.648178 ATTGTCATGTAGCAGCATTTGAA 57.352 34.783 0.00 0.00 0.00 2.69
2497 16917 5.450592 TTGTCATGTAGCAGCATTTGAAA 57.549 34.783 0.00 0.00 0.00 2.69
2498 16918 5.450592 TGTCATGTAGCAGCATTTGAAAA 57.549 34.783 0.00 0.00 0.00 2.29
2499 16919 5.221880 TGTCATGTAGCAGCATTTGAAAAC 58.778 37.500 0.00 0.00 0.00 2.43
2500 16920 5.221204 TGTCATGTAGCAGCATTTGAAAACA 60.221 36.000 0.00 0.00 0.00 2.83
2501 16921 5.117592 GTCATGTAGCAGCATTTGAAAACAC 59.882 40.000 0.00 0.00 0.00 3.32
2502 16922 3.976169 TGTAGCAGCATTTGAAAACACC 58.024 40.909 0.00 0.00 0.00 4.16
2503 16923 3.636300 TGTAGCAGCATTTGAAAACACCT 59.364 39.130 0.00 0.00 0.00 4.00
2504 16924 3.102052 AGCAGCATTTGAAAACACCTG 57.898 42.857 0.00 0.00 0.00 4.00
2505 16925 2.137523 GCAGCATTTGAAAACACCTGG 58.862 47.619 0.00 0.00 0.00 4.45
2506 16926 2.224018 GCAGCATTTGAAAACACCTGGA 60.224 45.455 0.00 0.00 0.00 3.86
2507 16927 3.740764 GCAGCATTTGAAAACACCTGGAA 60.741 43.478 0.00 0.00 0.00 3.53
2508 16928 4.440880 CAGCATTTGAAAACACCTGGAAA 58.559 39.130 0.00 0.00 0.00 3.13
2509 16929 4.874966 CAGCATTTGAAAACACCTGGAAAA 59.125 37.500 0.00 0.00 0.00 2.29
2510 16930 5.528320 CAGCATTTGAAAACACCTGGAAAAT 59.472 36.000 0.00 0.00 0.00 1.82
2511 16931 6.705381 CAGCATTTGAAAACACCTGGAAAATA 59.295 34.615 0.00 0.00 0.00 1.40
2512 16932 7.226325 CAGCATTTGAAAACACCTGGAAAATAA 59.774 33.333 0.00 0.00 0.00 1.40
2513 16933 7.938490 AGCATTTGAAAACACCTGGAAAATAAT 59.062 29.630 0.00 0.00 0.00 1.28
2514 16934 8.016801 GCATTTGAAAACACCTGGAAAATAATG 58.983 33.333 0.00 1.63 0.00 1.90
2515 16935 9.054922 CATTTGAAAACACCTGGAAAATAATGT 57.945 29.630 0.00 0.00 0.00 2.71
2516 16936 9.625747 ATTTGAAAACACCTGGAAAATAATGTT 57.374 25.926 0.00 0.00 31.82 2.71
2517 16937 8.430801 TTGAAAACACCTGGAAAATAATGTTG 57.569 30.769 0.00 0.00 30.99 3.33
2518 16938 6.481644 TGAAAACACCTGGAAAATAATGTTGC 59.518 34.615 0.00 0.00 30.99 4.17
2519 16939 4.173036 ACACCTGGAAAATAATGTTGCG 57.827 40.909 0.00 0.00 0.00 4.85
2520 16940 2.923020 CACCTGGAAAATAATGTTGCGC 59.077 45.455 0.00 0.00 0.00 6.09
2521 16941 2.094234 ACCTGGAAAATAATGTTGCGCC 60.094 45.455 4.18 0.00 0.00 6.53
2522 16942 2.094286 CCTGGAAAATAATGTTGCGCCA 60.094 45.455 4.18 0.00 0.00 5.69
2523 16943 3.430651 CCTGGAAAATAATGTTGCGCCAT 60.431 43.478 4.18 0.00 0.00 4.40
2524 16944 3.519579 TGGAAAATAATGTTGCGCCATG 58.480 40.909 4.18 0.00 0.00 3.66
2525 16945 3.056250 TGGAAAATAATGTTGCGCCATGT 60.056 39.130 4.18 0.00 0.00 3.21
2526 16946 3.306703 GGAAAATAATGTTGCGCCATGTG 59.693 43.478 4.18 0.00 0.00 3.21
2527 16947 2.582728 AATAATGTTGCGCCATGTGG 57.417 45.000 4.18 0.00 38.53 4.17
2528 16948 1.473258 ATAATGTTGCGCCATGTGGT 58.527 45.000 4.18 0.00 37.57 4.16
2529 16949 2.115343 TAATGTTGCGCCATGTGGTA 57.885 45.000 4.18 0.00 37.57 3.25
2530 16950 1.473258 AATGTTGCGCCATGTGGTAT 58.527 45.000 4.18 0.00 37.57 2.73
2531 16951 2.340210 ATGTTGCGCCATGTGGTATA 57.660 45.000 4.18 0.00 37.57 1.47
2532 16952 2.340210 TGTTGCGCCATGTGGTATAT 57.660 45.000 4.18 0.00 37.57 0.86
2533 16953 3.477210 TGTTGCGCCATGTGGTATATA 57.523 42.857 4.18 0.00 37.57 0.86
2534 16954 4.014569 TGTTGCGCCATGTGGTATATAT 57.985 40.909 4.18 0.00 37.57 0.86
2535 16955 5.153950 TGTTGCGCCATGTGGTATATATA 57.846 39.130 4.18 0.00 37.57 0.86
2536 16956 5.739959 TGTTGCGCCATGTGGTATATATAT 58.260 37.500 4.18 0.00 37.57 0.86
2537 16957 5.584251 TGTTGCGCCATGTGGTATATATATG 59.416 40.000 4.18 0.00 37.57 1.78
2538 16958 5.351948 TGCGCCATGTGGTATATATATGT 57.648 39.130 4.18 0.00 37.57 2.29
2539 16959 5.739959 TGCGCCATGTGGTATATATATGTT 58.260 37.500 4.18 0.00 37.57 2.71
2540 16960 5.584251 TGCGCCATGTGGTATATATATGTTG 59.416 40.000 4.18 0.00 37.57 3.33
2541 16961 5.007626 GCGCCATGTGGTATATATATGTTGG 59.992 44.000 5.44 4.79 37.57 3.77
2542 16962 6.345298 CGCCATGTGGTATATATATGTTGGA 58.655 40.000 5.44 0.00 37.57 3.53
2543 16963 6.821160 CGCCATGTGGTATATATATGTTGGAA 59.179 38.462 5.44 0.00 37.57 3.53
2544 16964 7.201609 CGCCATGTGGTATATATATGTTGGAAC 60.202 40.741 5.44 0.00 37.57 3.62
2545 16965 7.829211 GCCATGTGGTATATATATGTTGGAACT 59.171 37.037 5.44 0.00 37.57 3.01
2546 16966 9.383519 CCATGTGGTATATATATGTTGGAACTC 57.616 37.037 5.44 0.00 0.00 3.01
2547 16967 9.087424 CATGTGGTATATATATGTTGGAACTCG 57.913 37.037 5.44 0.00 0.00 4.18
2548 16968 7.094631 TGTGGTATATATATGTTGGAACTCGC 58.905 38.462 5.44 0.00 0.00 5.03
2549 16969 7.039293 TGTGGTATATATATGTTGGAACTCGCT 60.039 37.037 5.44 0.00 0.00 4.93
2550 16970 7.488471 GTGGTATATATATGTTGGAACTCGCTC 59.512 40.741 5.44 0.00 0.00 5.03
2551 16971 6.691818 GGTATATATATGTTGGAACTCGCTCG 59.308 42.308 5.44 0.00 0.00 5.03
2552 16972 2.961526 ATATGTTGGAACTCGCTCGT 57.038 45.000 0.00 0.00 0.00 4.18
2553 16973 5.700722 ATATATGTTGGAACTCGCTCGTA 57.299 39.130 0.00 0.00 0.00 3.43
2554 16974 2.279582 ATGTTGGAACTCGCTCGTAG 57.720 50.000 0.00 0.00 0.00 3.51
2555 16975 1.241165 TGTTGGAACTCGCTCGTAGA 58.759 50.000 0.00 0.00 0.00 2.59
2556 16976 1.610038 TGTTGGAACTCGCTCGTAGAA 59.390 47.619 0.00 0.00 34.09 2.10
2557 16977 2.230508 TGTTGGAACTCGCTCGTAGAAT 59.769 45.455 0.00 0.00 34.09 2.40
2558 16978 2.561733 TGGAACTCGCTCGTAGAATG 57.438 50.000 0.00 0.00 34.09 2.67
2559 16979 1.134367 TGGAACTCGCTCGTAGAATGG 59.866 52.381 0.00 0.00 34.09 3.16
2560 16980 1.404391 GGAACTCGCTCGTAGAATGGA 59.596 52.381 0.00 0.00 34.09 3.41
2561 16981 2.034812 GGAACTCGCTCGTAGAATGGAT 59.965 50.000 0.00 0.00 34.09 3.41
2562 16982 3.301706 GAACTCGCTCGTAGAATGGATC 58.698 50.000 0.00 0.00 34.09 3.36
2563 16983 2.298610 ACTCGCTCGTAGAATGGATCA 58.701 47.619 0.00 0.00 34.09 2.92
2564 16984 2.033550 ACTCGCTCGTAGAATGGATCAC 59.966 50.000 0.00 0.00 34.09 3.06
2565 16985 2.021457 TCGCTCGTAGAATGGATCACA 58.979 47.619 0.00 0.00 34.09 3.58
2566 16986 2.623416 TCGCTCGTAGAATGGATCACAT 59.377 45.455 0.00 0.00 43.07 3.21
2567 16987 2.983136 CGCTCGTAGAATGGATCACATC 59.017 50.000 0.00 0.00 39.40 3.06
2568 16988 3.550842 CGCTCGTAGAATGGATCACATCA 60.551 47.826 0.00 0.00 39.40 3.07
2569 16989 4.371786 GCTCGTAGAATGGATCACATCAA 58.628 43.478 0.00 0.00 39.40 2.57
2570 16990 4.811024 GCTCGTAGAATGGATCACATCAAA 59.189 41.667 0.00 0.00 39.40 2.69
2571 16991 5.294306 GCTCGTAGAATGGATCACATCAAAA 59.706 40.000 0.00 0.00 39.40 2.44
2572 16992 6.017605 GCTCGTAGAATGGATCACATCAAAAT 60.018 38.462 0.00 0.00 39.40 1.82
2573 16993 7.482654 TCGTAGAATGGATCACATCAAAATC 57.517 36.000 0.00 0.00 39.40 2.17
2574 16994 7.275183 TCGTAGAATGGATCACATCAAAATCT 58.725 34.615 0.00 0.00 39.40 2.40
2575 16995 7.439356 TCGTAGAATGGATCACATCAAAATCTC 59.561 37.037 0.00 0.00 39.40 2.75
2576 16996 7.225341 CGTAGAATGGATCACATCAAAATCTCA 59.775 37.037 0.00 0.00 39.40 3.27
2577 16997 7.330900 AGAATGGATCACATCAAAATCTCAC 57.669 36.000 0.00 0.00 39.40 3.51
2578 16998 6.888088 AGAATGGATCACATCAAAATCTCACA 59.112 34.615 0.00 0.00 39.40 3.58
2579 16999 7.395206 AGAATGGATCACATCAAAATCTCACAA 59.605 33.333 0.00 0.00 39.40 3.33
2580 17000 6.897706 TGGATCACATCAAAATCTCACAAA 57.102 33.333 0.00 0.00 0.00 2.83
2581 17001 6.680810 TGGATCACATCAAAATCTCACAAAC 58.319 36.000 0.00 0.00 0.00 2.93
2582 17002 6.264970 TGGATCACATCAAAATCTCACAAACA 59.735 34.615 0.00 0.00 0.00 2.83
2583 17003 6.583806 GGATCACATCAAAATCTCACAAACAC 59.416 38.462 0.00 0.00 0.00 3.32
2584 17004 6.448207 TCACATCAAAATCTCACAAACACA 57.552 33.333 0.00 0.00 0.00 3.72
2585 17005 6.861144 TCACATCAAAATCTCACAAACACAA 58.139 32.000 0.00 0.00 0.00 3.33
2586 17006 6.974048 TCACATCAAAATCTCACAAACACAAG 59.026 34.615 0.00 0.00 0.00 3.16
2587 17007 5.750067 ACATCAAAATCTCACAAACACAAGC 59.250 36.000 0.00 0.00 0.00 4.01
2588 17008 5.321959 TCAAAATCTCACAAACACAAGCA 57.678 34.783 0.00 0.00 0.00 3.91
2589 17009 5.101628 TCAAAATCTCACAAACACAAGCAC 58.898 37.500 0.00 0.00 0.00 4.40
2590 17010 4.717233 AAATCTCACAAACACAAGCACA 57.283 36.364 0.00 0.00 0.00 4.57
2591 17011 3.698029 ATCTCACAAACACAAGCACAC 57.302 42.857 0.00 0.00 0.00 3.82
2592 17012 2.431454 TCTCACAAACACAAGCACACA 58.569 42.857 0.00 0.00 0.00 3.72
2593 17013 2.161410 TCTCACAAACACAAGCACACAC 59.839 45.455 0.00 0.00 0.00 3.82
2594 17014 1.135831 TCACAAACACAAGCACACACG 60.136 47.619 0.00 0.00 0.00 4.49
2595 17015 1.135831 CACAAACACAAGCACACACGA 60.136 47.619 0.00 0.00 0.00 4.35
2596 17016 1.537638 ACAAACACAAGCACACACGAA 59.462 42.857 0.00 0.00 0.00 3.85
2597 17017 2.030717 ACAAACACAAGCACACACGAAA 60.031 40.909 0.00 0.00 0.00 3.46
2598 17018 2.983136 CAAACACAAGCACACACGAAAA 59.017 40.909 0.00 0.00 0.00 2.29
2599 17019 2.999507 ACACAAGCACACACGAAAAA 57.000 40.000 0.00 0.00 0.00 1.94
2600 17020 2.591133 ACACAAGCACACACGAAAAAC 58.409 42.857 0.00 0.00 0.00 2.43
2601 17021 2.030717 ACACAAGCACACACGAAAAACA 60.031 40.909 0.00 0.00 0.00 2.83
2602 17022 2.593775 CACAAGCACACACGAAAAACAG 59.406 45.455 0.00 0.00 0.00 3.16
2603 17023 1.583404 CAAGCACACACGAAAAACAGC 59.417 47.619 0.00 0.00 0.00 4.40
2604 17024 0.100503 AGCACACACGAAAAACAGCC 59.899 50.000 0.00 0.00 0.00 4.85
2605 17025 0.869880 GCACACACGAAAAACAGCCC 60.870 55.000 0.00 0.00 0.00 5.19
2606 17026 0.591236 CACACACGAAAAACAGCCCG 60.591 55.000 0.00 0.00 0.00 6.13
2607 17027 0.745128 ACACACGAAAAACAGCCCGA 60.745 50.000 0.00 0.00 0.00 5.14
2608 17028 0.041312 CACACGAAAAACAGCCCGAG 60.041 55.000 0.00 0.00 0.00 4.63
2609 17029 0.179067 ACACGAAAAACAGCCCGAGA 60.179 50.000 0.00 0.00 0.00 4.04
2610 17030 0.512952 CACGAAAAACAGCCCGAGAG 59.487 55.000 0.00 0.00 0.00 3.20
2611 17031 0.106149 ACGAAAAACAGCCCGAGAGT 59.894 50.000 0.00 0.00 0.00 3.24
2612 17032 0.512952 CGAAAAACAGCCCGAGAGTG 59.487 55.000 0.00 0.00 0.00 3.51
2613 17033 1.594331 GAAAAACAGCCCGAGAGTGT 58.406 50.000 0.00 0.00 0.00 3.55
2614 17034 1.947456 GAAAAACAGCCCGAGAGTGTT 59.053 47.619 0.00 0.00 35.93 3.32
2615 17035 2.922740 AAAACAGCCCGAGAGTGTTA 57.077 45.000 0.00 0.00 33.25 2.41
2616 17036 2.165319 AAACAGCCCGAGAGTGTTAC 57.835 50.000 0.00 0.00 33.25 2.50
2617 17037 0.320697 AACAGCCCGAGAGTGTTACC 59.679 55.000 0.00 0.00 32.63 2.85
2618 17038 0.542232 ACAGCCCGAGAGTGTTACCT 60.542 55.000 0.00 0.00 0.00 3.08
2619 17039 0.173708 CAGCCCGAGAGTGTTACCTC 59.826 60.000 0.00 0.00 0.00 3.85
2620 17040 0.251653 AGCCCGAGAGTGTTACCTCA 60.252 55.000 4.26 0.00 33.75 3.86
2621 17041 0.173708 GCCCGAGAGTGTTACCTCAG 59.826 60.000 4.26 0.00 33.75 3.35
2622 17042 0.173708 CCCGAGAGTGTTACCTCAGC 59.826 60.000 4.26 0.00 33.75 4.26
2623 17043 0.173708 CCGAGAGTGTTACCTCAGCC 59.826 60.000 4.26 0.00 33.75 4.85
2624 17044 0.179161 CGAGAGTGTTACCTCAGCCG 60.179 60.000 4.26 0.00 33.75 5.52
2625 17045 0.458716 GAGAGTGTTACCTCAGCCGC 60.459 60.000 4.26 0.00 33.75 6.53
2626 17046 1.448013 GAGTGTTACCTCAGCCGCC 60.448 63.158 0.00 0.00 0.00 6.13
2627 17047 2.813908 GTGTTACCTCAGCCGCCG 60.814 66.667 0.00 0.00 0.00 6.46
2628 17048 4.752879 TGTTACCTCAGCCGCCGC 62.753 66.667 0.00 0.00 0.00 6.53
2641 17061 2.841988 GCCGCCTCCTCCTCTCAT 60.842 66.667 0.00 0.00 0.00 2.90
2642 17062 2.866726 GCCGCCTCCTCCTCTCATC 61.867 68.421 0.00 0.00 0.00 2.92
2643 17063 2.206536 CCGCCTCCTCCTCTCATCC 61.207 68.421 0.00 0.00 0.00 3.51
2644 17064 1.456518 CGCCTCCTCCTCTCATCCA 60.457 63.158 0.00 0.00 0.00 3.41
2645 17065 1.045350 CGCCTCCTCCTCTCATCCAA 61.045 60.000 0.00 0.00 0.00 3.53
2646 17066 1.207791 GCCTCCTCCTCTCATCCAAA 58.792 55.000 0.00 0.00 0.00 3.28
2647 17067 1.561542 GCCTCCTCCTCTCATCCAAAA 59.438 52.381 0.00 0.00 0.00 2.44
2648 17068 2.682269 GCCTCCTCCTCTCATCCAAAAC 60.682 54.545 0.00 0.00 0.00 2.43
2649 17069 2.573462 CCTCCTCCTCTCATCCAAAACA 59.427 50.000 0.00 0.00 0.00 2.83
2650 17070 3.009473 CCTCCTCCTCTCATCCAAAACAA 59.991 47.826 0.00 0.00 0.00 2.83
2651 17071 4.507335 CCTCCTCCTCTCATCCAAAACAAA 60.507 45.833 0.00 0.00 0.00 2.83
2652 17072 4.655963 TCCTCCTCTCATCCAAAACAAAG 58.344 43.478 0.00 0.00 0.00 2.77
2653 17073 3.192212 CCTCCTCTCATCCAAAACAAAGC 59.808 47.826 0.00 0.00 0.00 3.51
2654 17074 4.077822 CTCCTCTCATCCAAAACAAAGCT 58.922 43.478 0.00 0.00 0.00 3.74
2655 17075 5.241403 TCCTCTCATCCAAAACAAAGCTA 57.759 39.130 0.00 0.00 0.00 3.32
2656 17076 5.248640 TCCTCTCATCCAAAACAAAGCTAG 58.751 41.667 0.00 0.00 0.00 3.42
2657 17077 4.397417 CCTCTCATCCAAAACAAAGCTAGG 59.603 45.833 0.00 0.00 0.00 3.02
2658 17078 4.335416 TCTCATCCAAAACAAAGCTAGGG 58.665 43.478 0.00 0.00 0.00 3.53
2659 17079 4.082125 CTCATCCAAAACAAAGCTAGGGT 58.918 43.478 0.00 0.00 0.00 4.34
2660 17080 4.479158 TCATCCAAAACAAAGCTAGGGTT 58.521 39.130 0.00 0.00 0.00 4.11
2661 17081 4.898861 TCATCCAAAACAAAGCTAGGGTTT 59.101 37.500 4.91 4.91 36.37 3.27
2667 17087 1.620822 CAAAGCTAGGGTTTGTGCCT 58.379 50.000 12.26 0.00 43.32 4.75
2668 17088 1.541588 CAAAGCTAGGGTTTGTGCCTC 59.458 52.381 12.26 0.00 43.32 4.70
2669 17089 1.068121 AAGCTAGGGTTTGTGCCTCT 58.932 50.000 0.00 0.00 0.00 3.69
2670 17090 0.615850 AGCTAGGGTTTGTGCCTCTC 59.384 55.000 0.00 0.00 0.00 3.20
2671 17091 0.741221 GCTAGGGTTTGTGCCTCTCG 60.741 60.000 0.00 0.00 0.00 4.04
2672 17092 0.741221 CTAGGGTTTGTGCCTCTCGC 60.741 60.000 0.00 0.00 38.31 5.03
2673 17093 1.192146 TAGGGTTTGTGCCTCTCGCT 61.192 55.000 0.00 0.00 38.78 4.93
2674 17094 2.328099 GGGTTTGTGCCTCTCGCTG 61.328 63.158 0.00 0.00 38.78 5.18
2675 17095 2.328099 GGTTTGTGCCTCTCGCTGG 61.328 63.158 0.00 0.00 38.78 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 9600 1.202830 ACTTGCCAACACCCACGATAA 60.203 47.619 0.00 0.00 0.00 1.75
109 9665 1.821753 CACCAAATAATCCAACCGCCA 59.178 47.619 0.00 0.00 0.00 5.69
168 9724 4.090761 ACATGGCTTCTCTCTGAAACAA 57.909 40.909 0.00 0.00 33.79 2.83
249 13075 0.387112 CAAACATCCGCGCACATGTT 60.387 50.000 22.20 22.20 43.61 2.71
257 13083 2.464459 GCCTCCTCAAACATCCGCG 61.464 63.158 0.00 0.00 0.00 6.46
477 13550 4.130118 GCGATCAATGTTAATCCCAGTCT 58.870 43.478 0.00 0.00 0.00 3.24
555 13641 0.572125 GCGCTTTATTGCAAATCGGC 59.428 50.000 1.71 5.51 0.00 5.54
560 13646 5.229052 GTGATATTTCGCGCTTTATTGCAAA 59.771 36.000 1.71 0.00 0.00 3.68
867 14462 3.761140 CGTGCATGGCCATGGCAA 61.761 61.111 39.72 28.74 42.43 4.52
951 14554 4.317488 GTGTGGGTTTTATAGGACGACAA 58.683 43.478 0.00 0.00 0.00 3.18
1036 14656 1.458927 GCAGTTAAGGGGGTGGTGT 59.541 57.895 0.00 0.00 0.00 4.16
1041 14661 1.767692 CACTGGCAGTTAAGGGGGT 59.232 57.895 19.43 0.00 0.00 4.95
1042 14662 1.678970 GCACTGGCAGTTAAGGGGG 60.679 63.158 19.43 5.93 40.72 5.40
1043 14663 1.678970 GGCACTGGCAGTTAAGGGG 60.679 63.158 19.43 6.73 43.71 4.79
1045 14665 4.819783 TGGCACTGGCAGTTAAGG 57.180 55.556 19.43 7.95 43.71 2.69
1079 14712 2.034879 GTCTAAGCGCAGGCAGCAA 61.035 57.895 11.47 0.00 46.13 3.91
1101 14737 1.349259 GCAGGCAAATCGCAAGCTTG 61.349 55.000 22.44 22.44 45.17 4.01
1103 14739 1.601419 ATGCAGGCAAATCGCAAGCT 61.601 50.000 0.00 0.00 45.17 3.74
1104 14740 0.101040 TATGCAGGCAAATCGCAAGC 59.899 50.000 0.00 0.00 45.17 4.01
1105 14741 1.402968 AGTATGCAGGCAAATCGCAAG 59.597 47.619 0.00 0.00 45.17 4.01
1107 14743 1.016627 GAGTATGCAGGCAAATCGCA 58.983 50.000 0.00 0.00 45.17 5.10
1108 14744 1.016627 TGAGTATGCAGGCAAATCGC 58.983 50.000 0.00 0.00 41.28 4.58
1109 14745 1.004610 CGTGAGTATGCAGGCAAATCG 60.005 52.381 0.00 0.00 0.00 3.34
1110 14746 1.268234 GCGTGAGTATGCAGGCAAATC 60.268 52.381 0.00 0.00 45.94 2.17
1111 14747 0.734889 GCGTGAGTATGCAGGCAAAT 59.265 50.000 0.00 0.00 45.94 2.32
1112 14748 2.170738 GCGTGAGTATGCAGGCAAA 58.829 52.632 0.00 0.00 45.94 3.68
1115 14751 1.218230 GCTAGCGTGAGTATGCAGGC 61.218 60.000 0.00 0.00 46.75 4.85
1128 14773 3.009140 CGCCATGACAAGCTAGCG 58.991 61.111 9.55 0.00 37.39 4.26
1148 14793 1.944676 GCCTATGACCTTCGACGCG 60.945 63.158 3.53 3.53 0.00 6.01
1163 14808 3.233355 GTCTTTGATGACGTGGCCT 57.767 52.632 3.32 0.00 0.00 5.19
1173 14824 1.802636 CAATGCCGCCGTCTTTGAT 59.197 52.632 0.00 0.00 0.00 2.57
1176 14827 3.747976 GGCAATGCCGCCGTCTTT 61.748 61.111 9.14 0.00 43.52 2.52
1305 14959 1.594293 ACGAACGTGCACTTCAGGG 60.594 57.895 16.19 7.78 35.01 4.45
1511 15466 6.989169 AGCACAAGCCTACTTTCAATATCTAG 59.011 38.462 0.00 0.00 43.56 2.43
1595 15578 4.212636 ACATACGAACACAAACAGTAAGGC 59.787 41.667 0.00 0.00 0.00 4.35
1611 15594 1.147473 CACAGCAACAGCACATACGA 58.853 50.000 0.00 0.00 0.00 3.43
1681 15838 6.925165 CCAGATGCAAATTAAACAAGTGAAGT 59.075 34.615 0.00 0.00 0.00 3.01
1747 15906 5.518848 TTCTGCTTCAAGAAAAATCAGCA 57.481 34.783 0.00 0.00 33.25 4.41
1980 16316 1.128692 GTGTTCGGCATGCAGAAGTAC 59.871 52.381 29.79 25.57 31.38 2.73
2116 16502 5.356470 TGAACATATCCAAATGATCAACGCA 59.644 36.000 0.00 0.00 36.20 5.24
2129 16515 6.836242 TGTGTAATAGCCATGAACATATCCA 58.164 36.000 0.00 0.00 0.00 3.41
2130 16516 7.161404 TCTGTGTAATAGCCATGAACATATCC 58.839 38.462 0.00 0.00 0.00 2.59
2131 16517 8.663025 CATCTGTGTAATAGCCATGAACATATC 58.337 37.037 0.00 0.00 0.00 1.63
2132 16518 8.377799 TCATCTGTGTAATAGCCATGAACATAT 58.622 33.333 0.00 0.00 0.00 1.78
2133 16519 7.734942 TCATCTGTGTAATAGCCATGAACATA 58.265 34.615 0.00 0.00 0.00 2.29
2134 16520 6.594744 TCATCTGTGTAATAGCCATGAACAT 58.405 36.000 0.00 0.00 0.00 2.71
2135 16521 5.988287 TCATCTGTGTAATAGCCATGAACA 58.012 37.500 0.00 0.00 0.00 3.18
2136 16522 6.925610 TTCATCTGTGTAATAGCCATGAAC 57.074 37.500 0.00 0.00 28.26 3.18
2138 16524 9.625747 TTATTTTCATCTGTGTAATAGCCATGA 57.374 29.630 0.00 0.00 0.00 3.07
2139 16525 9.888878 CTTATTTTCATCTGTGTAATAGCCATG 57.111 33.333 0.00 0.00 0.00 3.66
2140 16526 8.571336 GCTTATTTTCATCTGTGTAATAGCCAT 58.429 33.333 0.00 0.00 0.00 4.40
2150 16570 3.119884 TGTGGCGCTTATTTTCATCTGTG 60.120 43.478 7.64 0.00 0.00 3.66
2177 16597 3.737266 GCCATAAACATCGCATCCAATTG 59.263 43.478 0.00 0.00 0.00 2.32
2178 16598 3.638160 AGCCATAAACATCGCATCCAATT 59.362 39.130 0.00 0.00 0.00 2.32
2184 16604 3.540617 TGTGTAGCCATAAACATCGCAT 58.459 40.909 0.00 0.00 0.00 4.73
2187 16607 6.215477 CTACATGTGTAGCCATAAACATCG 57.785 41.667 9.11 0.00 37.69 3.84
2219 16639 1.621814 CCCCTCACAACGACTAAAGGA 59.378 52.381 0.00 0.00 0.00 3.36
2220 16640 1.346722 ACCCCTCACAACGACTAAAGG 59.653 52.381 0.00 0.00 0.00 3.11
2221 16641 2.806244 CAACCCCTCACAACGACTAAAG 59.194 50.000 0.00 0.00 0.00 1.85
2222 16642 2.841215 CAACCCCTCACAACGACTAAA 58.159 47.619 0.00 0.00 0.00 1.85
2223 16643 1.541670 GCAACCCCTCACAACGACTAA 60.542 52.381 0.00 0.00 0.00 2.24
2224 16644 0.034337 GCAACCCCTCACAACGACTA 59.966 55.000 0.00 0.00 0.00 2.59
2225 16645 1.227853 GCAACCCCTCACAACGACT 60.228 57.895 0.00 0.00 0.00 4.18
2226 16646 0.034337 TAGCAACCCCTCACAACGAC 59.966 55.000 0.00 0.00 0.00 4.34
2227 16647 0.034337 GTAGCAACCCCTCACAACGA 59.966 55.000 0.00 0.00 0.00 3.85
2228 16648 0.250124 TGTAGCAACCCCTCACAACG 60.250 55.000 0.00 0.00 0.00 4.10
2229 16649 1.235724 GTGTAGCAACCCCTCACAAC 58.764 55.000 0.00 0.00 0.00 3.32
2230 16650 0.840617 TGTGTAGCAACCCCTCACAA 59.159 50.000 0.00 0.00 36.34 3.33
2231 16651 0.396435 CTGTGTAGCAACCCCTCACA 59.604 55.000 0.00 0.00 37.44 3.58
2232 16652 0.321653 CCTGTGTAGCAACCCCTCAC 60.322 60.000 0.00 0.00 0.00 3.51
2233 16653 1.488705 CCCTGTGTAGCAACCCCTCA 61.489 60.000 0.00 0.00 0.00 3.86
2234 16654 1.198759 TCCCTGTGTAGCAACCCCTC 61.199 60.000 0.00 0.00 0.00 4.30
2235 16655 0.550147 ATCCCTGTGTAGCAACCCCT 60.550 55.000 0.00 0.00 0.00 4.79
2236 16656 0.394352 CATCCCTGTGTAGCAACCCC 60.394 60.000 0.00 0.00 0.00 4.95
2237 16657 0.618458 TCATCCCTGTGTAGCAACCC 59.382 55.000 0.00 0.00 0.00 4.11
2238 16658 2.292267 CATCATCCCTGTGTAGCAACC 58.708 52.381 0.00 0.00 0.00 3.77
2239 16659 2.991250 ACATCATCCCTGTGTAGCAAC 58.009 47.619 0.00 0.00 0.00 4.17
2240 16660 4.164030 ACATACATCATCCCTGTGTAGCAA 59.836 41.667 0.00 0.00 32.45 3.91
2241 16661 3.711190 ACATACATCATCCCTGTGTAGCA 59.289 43.478 0.00 0.00 32.45 3.49
2242 16662 4.342862 ACATACATCATCCCTGTGTAGC 57.657 45.455 0.00 0.00 32.45 3.58
2243 16663 7.761704 GCTATTACATACATCATCCCTGTGTAG 59.238 40.741 0.00 0.00 32.45 2.74
2244 16664 7.454694 AGCTATTACATACATCATCCCTGTGTA 59.545 37.037 0.00 0.00 33.35 2.90
2245 16665 6.270927 AGCTATTACATACATCATCCCTGTGT 59.729 38.462 0.00 0.00 0.00 3.72
2246 16666 6.705302 AGCTATTACATACATCATCCCTGTG 58.295 40.000 0.00 0.00 0.00 3.66
2247 16667 6.350528 CGAGCTATTACATACATCATCCCTGT 60.351 42.308 0.00 0.00 0.00 4.00
2248 16668 6.038985 CGAGCTATTACATACATCATCCCTG 58.961 44.000 0.00 0.00 0.00 4.45
2249 16669 5.952347 TCGAGCTATTACATACATCATCCCT 59.048 40.000 0.00 0.00 0.00 4.20
2250 16670 6.037098 GTCGAGCTATTACATACATCATCCC 58.963 44.000 0.00 0.00 0.00 3.85
2251 16671 6.037098 GGTCGAGCTATTACATACATCATCC 58.963 44.000 7.51 0.00 0.00 3.51
2252 16672 6.621613 TGGTCGAGCTATTACATACATCATC 58.378 40.000 16.64 0.00 0.00 2.92
2253 16673 6.590234 TGGTCGAGCTATTACATACATCAT 57.410 37.500 16.64 0.00 0.00 2.45
2254 16674 6.590234 ATGGTCGAGCTATTACATACATCA 57.410 37.500 16.64 0.00 0.00 3.07
2255 16675 6.183360 GCAATGGTCGAGCTATTACATACATC 60.183 42.308 16.64 0.00 0.00 3.06
2256 16676 5.639506 GCAATGGTCGAGCTATTACATACAT 59.360 40.000 16.64 0.00 0.00 2.29
2257 16677 4.988540 GCAATGGTCGAGCTATTACATACA 59.011 41.667 16.64 0.00 0.00 2.29
2258 16678 4.988540 TGCAATGGTCGAGCTATTACATAC 59.011 41.667 16.64 0.00 0.00 2.39
2259 16679 5.208463 TGCAATGGTCGAGCTATTACATA 57.792 39.130 16.64 0.00 0.00 2.29
2260 16680 4.071961 TGCAATGGTCGAGCTATTACAT 57.928 40.909 16.64 0.00 0.00 2.29
2261 16681 3.535280 TGCAATGGTCGAGCTATTACA 57.465 42.857 16.64 11.32 0.00 2.41
2262 16682 3.433615 GGATGCAATGGTCGAGCTATTAC 59.566 47.826 16.64 9.08 0.00 1.89
2263 16683 3.324846 AGGATGCAATGGTCGAGCTATTA 59.675 43.478 16.64 0.00 0.00 0.98
2264 16684 2.105477 AGGATGCAATGGTCGAGCTATT 59.895 45.455 16.64 10.73 0.00 1.73
2265 16685 1.696336 AGGATGCAATGGTCGAGCTAT 59.304 47.619 16.64 5.02 0.00 2.97
2266 16686 1.069204 GAGGATGCAATGGTCGAGCTA 59.931 52.381 16.64 2.64 0.00 3.32
2267 16687 0.179062 GAGGATGCAATGGTCGAGCT 60.179 55.000 16.64 0.00 0.00 4.09
2268 16688 1.162800 GGAGGATGCAATGGTCGAGC 61.163 60.000 7.89 7.89 0.00 5.03
2269 16689 0.467384 AGGAGGATGCAATGGTCGAG 59.533 55.000 0.00 0.00 0.00 4.04
2270 16690 0.911769 AAGGAGGATGCAATGGTCGA 59.088 50.000 0.00 0.00 0.00 4.20
2271 16691 1.402968 CAAAGGAGGATGCAATGGTCG 59.597 52.381 0.00 0.00 0.00 4.79
2272 16692 2.450476 ACAAAGGAGGATGCAATGGTC 58.550 47.619 0.00 0.00 0.00 4.02
2273 16693 2.564062 CAACAAAGGAGGATGCAATGGT 59.436 45.455 0.00 0.00 0.00 3.55
2274 16694 2.675889 GCAACAAAGGAGGATGCAATGG 60.676 50.000 0.00 0.00 37.00 3.16
2275 16695 2.613691 GCAACAAAGGAGGATGCAATG 58.386 47.619 0.00 0.00 37.00 2.82
2276 16696 1.551883 GGCAACAAAGGAGGATGCAAT 59.448 47.619 0.00 0.00 38.73 3.56
2277 16697 0.968405 GGCAACAAAGGAGGATGCAA 59.032 50.000 0.00 0.00 38.73 4.08
2278 16698 2.657297 GGCAACAAAGGAGGATGCA 58.343 52.632 0.00 0.00 38.73 3.96
2291 16711 1.402787 ATCGATGGGGAAATGGCAAC 58.597 50.000 0.00 0.00 0.00 4.17
2292 16712 2.157640 AATCGATGGGGAAATGGCAA 57.842 45.000 0.00 0.00 0.00 4.52
2293 16713 3.524095 ATAATCGATGGGGAAATGGCA 57.476 42.857 0.00 0.00 0.00 4.92
2294 16714 6.071391 ACAATAATAATCGATGGGGAAATGGC 60.071 38.462 0.00 0.00 0.00 4.40
2295 16715 7.466746 ACAATAATAATCGATGGGGAAATGG 57.533 36.000 0.00 0.00 0.00 3.16
2296 16716 9.231297 AGTACAATAATAATCGATGGGGAAATG 57.769 33.333 0.00 0.00 0.00 2.32
2297 16717 9.449719 GAGTACAATAATAATCGATGGGGAAAT 57.550 33.333 0.00 0.00 0.00 2.17
2298 16718 8.656806 AGAGTACAATAATAATCGATGGGGAAA 58.343 33.333 0.00 0.00 0.00 3.13
2299 16719 8.202461 AGAGTACAATAATAATCGATGGGGAA 57.798 34.615 0.00 0.00 0.00 3.97
2300 16720 7.674348 AGAGAGTACAATAATAATCGATGGGGA 59.326 37.037 0.00 0.00 0.00 4.81
2301 16721 7.841956 AGAGAGTACAATAATAATCGATGGGG 58.158 38.462 0.00 0.00 0.00 4.96
2302 16722 7.976734 GGAGAGAGTACAATAATAATCGATGGG 59.023 40.741 0.00 0.00 0.00 4.00
2303 16723 7.698550 CGGAGAGAGTACAATAATAATCGATGG 59.301 40.741 0.00 0.00 0.00 3.51
2304 16724 8.237949 ACGGAGAGAGTACAATAATAATCGATG 58.762 37.037 0.00 0.00 0.00 3.84
2305 16725 8.338072 ACGGAGAGAGTACAATAATAATCGAT 57.662 34.615 0.00 0.00 0.00 3.59
2306 16726 7.094890 GGACGGAGAGAGTACAATAATAATCGA 60.095 40.741 0.00 0.00 0.00 3.59
2307 16727 7.022384 GGACGGAGAGAGTACAATAATAATCG 58.978 42.308 0.00 0.00 0.00 3.34
2308 16728 7.022384 CGGACGGAGAGAGTACAATAATAATC 58.978 42.308 0.00 0.00 0.00 1.75
2309 16729 6.072064 CCGGACGGAGAGAGTACAATAATAAT 60.072 42.308 4.40 0.00 37.50 1.28
2310 16730 5.240183 CCGGACGGAGAGAGTACAATAATAA 59.760 44.000 4.40 0.00 37.50 1.40
2311 16731 4.758674 CCGGACGGAGAGAGTACAATAATA 59.241 45.833 4.40 0.00 37.50 0.98
2312 16732 3.568853 CCGGACGGAGAGAGTACAATAAT 59.431 47.826 4.40 0.00 37.50 1.28
2313 16733 2.947652 CCGGACGGAGAGAGTACAATAA 59.052 50.000 4.40 0.00 37.50 1.40
2314 16734 2.171237 TCCGGACGGAGAGAGTACAATA 59.829 50.000 9.76 0.00 39.76 1.90
2315 16735 1.064906 TCCGGACGGAGAGAGTACAAT 60.065 52.381 9.76 0.00 39.76 2.71
2316 16736 0.325933 TCCGGACGGAGAGAGTACAA 59.674 55.000 9.76 0.00 39.76 2.41
2317 16737 0.325933 TTCCGGACGGAGAGAGTACA 59.674 55.000 13.64 0.00 46.06 2.90
2318 16738 1.457346 TTTCCGGACGGAGAGAGTAC 58.543 55.000 13.64 0.00 46.06 2.73
2319 16739 2.431954 ATTTCCGGACGGAGAGAGTA 57.568 50.000 13.64 0.00 46.06 2.59
2320 16740 2.022934 GTATTTCCGGACGGAGAGAGT 58.977 52.381 13.64 0.00 46.06 3.24
2321 16741 2.299521 AGTATTTCCGGACGGAGAGAG 58.700 52.381 13.64 0.00 46.06 3.20
2322 16742 2.431954 AGTATTTCCGGACGGAGAGA 57.568 50.000 13.64 3.93 46.06 3.10
2323 16743 3.521947 AAAGTATTTCCGGACGGAGAG 57.478 47.619 13.64 0.00 46.06 3.20
2324 16744 3.512724 AGAAAAGTATTTCCGGACGGAGA 59.487 43.478 13.64 10.06 44.96 3.71
2325 16745 3.858247 AGAAAAGTATTTCCGGACGGAG 58.142 45.455 13.64 0.00 44.96 4.63
2326 16746 3.967332 AGAAAAGTATTTCCGGACGGA 57.033 42.857 1.83 9.76 44.96 4.69
2327 16747 4.569564 CCTAAGAAAAGTATTTCCGGACGG 59.430 45.833 1.83 3.96 44.96 4.79
2328 16748 5.413499 TCCTAAGAAAAGTATTTCCGGACG 58.587 41.667 1.83 0.00 44.96 4.79
2329 16749 7.201705 CCATTCCTAAGAAAAGTATTTCCGGAC 60.202 40.741 1.83 0.00 44.96 4.79
2330 16750 6.826741 CCATTCCTAAGAAAAGTATTTCCGGA 59.173 38.462 0.00 0.00 44.96 5.14
2331 16751 6.602009 ACCATTCCTAAGAAAAGTATTTCCGG 59.398 38.462 0.00 0.00 44.96 5.14
2332 16752 7.625828 ACCATTCCTAAGAAAAGTATTTCCG 57.374 36.000 0.00 0.00 44.96 4.30
2333 16753 8.803235 ACAACCATTCCTAAGAAAAGTATTTCC 58.197 33.333 0.00 0.00 44.96 3.13
2339 16759 9.892130 CTAGATACAACCATTCCTAAGAAAAGT 57.108 33.333 0.00 0.00 35.09 2.66
2341 16761 9.886132 GTCTAGATACAACCATTCCTAAGAAAA 57.114 33.333 0.00 0.00 35.09 2.29
2342 16762 9.268282 AGTCTAGATACAACCATTCCTAAGAAA 57.732 33.333 0.00 0.00 35.09 2.52
2343 16763 8.840200 AGTCTAGATACAACCATTCCTAAGAA 57.160 34.615 0.00 0.00 36.15 2.52
2344 16764 8.840200 AAGTCTAGATACAACCATTCCTAAGA 57.160 34.615 0.00 0.00 0.00 2.10
2396 16816 9.238368 TCGAAAATACTTGTCCTAAAAATGGAT 57.762 29.630 0.00 0.00 35.87 3.41
2397 16817 8.624367 TCGAAAATACTTGTCCTAAAAATGGA 57.376 30.769 0.00 0.00 0.00 3.41
2398 16818 9.124807 GTTCGAAAATACTTGTCCTAAAAATGG 57.875 33.333 0.00 0.00 0.00 3.16
2399 16819 9.672086 TGTTCGAAAATACTTGTCCTAAAAATG 57.328 29.630 0.00 0.00 0.00 2.32
2400 16820 9.893305 CTGTTCGAAAATACTTGTCCTAAAAAT 57.107 29.630 0.00 0.00 0.00 1.82
2401 16821 9.111613 TCTGTTCGAAAATACTTGTCCTAAAAA 57.888 29.630 0.00 0.00 0.00 1.94
2402 16822 8.665643 TCTGTTCGAAAATACTTGTCCTAAAA 57.334 30.769 0.00 0.00 0.00 1.52
2403 16823 7.386848 CCTCTGTTCGAAAATACTTGTCCTAAA 59.613 37.037 0.00 0.00 0.00 1.85
2404 16824 6.872020 CCTCTGTTCGAAAATACTTGTCCTAA 59.128 38.462 0.00 0.00 0.00 2.69
2405 16825 6.209986 TCCTCTGTTCGAAAATACTTGTCCTA 59.790 38.462 0.00 0.00 0.00 2.94
2406 16826 5.011738 TCCTCTGTTCGAAAATACTTGTCCT 59.988 40.000 0.00 0.00 0.00 3.85
2407 16827 5.235516 TCCTCTGTTCGAAAATACTTGTCC 58.764 41.667 0.00 0.00 0.00 4.02
2408 16828 6.424207 ACTTCCTCTGTTCGAAAATACTTGTC 59.576 38.462 0.00 0.00 0.00 3.18
2409 16829 6.289064 ACTTCCTCTGTTCGAAAATACTTGT 58.711 36.000 0.00 0.00 0.00 3.16
2410 16830 6.787085 ACTTCCTCTGTTCGAAAATACTTG 57.213 37.500 0.00 0.00 0.00 3.16
2418 16838 9.720769 AGAAAAATTATACTTCCTCTGTTCGAA 57.279 29.630 0.00 0.00 0.00 3.71
2419 16839 9.720769 AAGAAAAATTATACTTCCTCTGTTCGA 57.279 29.630 0.00 0.00 0.00 3.71
2420 16840 9.974750 GAAGAAAAATTATACTTCCTCTGTTCG 57.025 33.333 0.00 0.00 34.54 3.95
2421 16841 9.974750 CGAAGAAAAATTATACTTCCTCTGTTC 57.025 33.333 0.00 0.00 36.43 3.18
2422 16842 9.720769 TCGAAGAAAAATTATACTTCCTCTGTT 57.279 29.630 0.00 0.00 36.43 3.16
2423 16843 9.152595 GTCGAAGAAAAATTATACTTCCTCTGT 57.847 33.333 0.00 0.00 39.69 3.41
2424 16844 9.151471 TGTCGAAGAAAAATTATACTTCCTCTG 57.849 33.333 0.00 0.00 39.69 3.35
2425 16845 9.720769 TTGTCGAAGAAAAATTATACTTCCTCT 57.279 29.630 0.00 0.00 39.69 3.69
2444 16864 9.527391 TGGATTACCCTTTGACTCTTTGTCGAA 62.527 40.741 0.00 0.00 44.17 3.71
2445 16865 8.149101 TGGATTACCCTTTGACTCTTTGTCGA 62.149 42.308 0.00 0.00 41.24 4.20
2446 16866 6.029289 TGGATTACCCTTTGACTCTTTGTCG 61.029 44.000 0.00 0.00 41.24 4.35
2447 16867 5.313712 TGGATTACCCTTTGACTCTTTGTC 58.686 41.667 0.00 0.00 39.90 3.18
2448 16868 5.163088 ACTGGATTACCCTTTGACTCTTTGT 60.163 40.000 0.00 0.00 35.38 2.83
2449 16869 5.316987 ACTGGATTACCCTTTGACTCTTTG 58.683 41.667 0.00 0.00 35.38 2.77
2450 16870 5.584551 ACTGGATTACCCTTTGACTCTTT 57.415 39.130 0.00 0.00 35.38 2.52
2451 16871 5.584551 AACTGGATTACCCTTTGACTCTT 57.415 39.130 0.00 0.00 35.38 2.85
2452 16872 6.893020 ATAACTGGATTACCCTTTGACTCT 57.107 37.500 0.00 0.00 35.38 3.24
2453 16873 6.884836 ACAATAACTGGATTACCCTTTGACTC 59.115 38.462 0.00 0.00 35.38 3.36
2454 16874 6.790319 ACAATAACTGGATTACCCTTTGACT 58.210 36.000 0.00 0.00 35.38 3.41
2455 16875 6.657541 TGACAATAACTGGATTACCCTTTGAC 59.342 38.462 0.00 0.00 35.38 3.18
2456 16876 6.785076 TGACAATAACTGGATTACCCTTTGA 58.215 36.000 0.00 0.00 35.38 2.69
2457 16877 7.122650 ACATGACAATAACTGGATTACCCTTTG 59.877 37.037 0.00 0.00 35.38 2.77
2458 16878 7.182060 ACATGACAATAACTGGATTACCCTTT 58.818 34.615 0.00 0.00 35.38 3.11
2459 16879 6.731467 ACATGACAATAACTGGATTACCCTT 58.269 36.000 0.00 0.00 35.38 3.95
2460 16880 6.327386 ACATGACAATAACTGGATTACCCT 57.673 37.500 0.00 0.00 35.38 4.34
2461 16881 6.204882 GCTACATGACAATAACTGGATTACCC 59.795 42.308 0.00 0.00 34.81 3.69
2462 16882 6.765989 TGCTACATGACAATAACTGGATTACC 59.234 38.462 0.00 0.00 0.00 2.85
2463 16883 7.519008 GCTGCTACATGACAATAACTGGATTAC 60.519 40.741 0.00 0.00 0.00 1.89
2464 16884 6.483307 GCTGCTACATGACAATAACTGGATTA 59.517 38.462 0.00 0.00 0.00 1.75
2465 16885 5.297776 GCTGCTACATGACAATAACTGGATT 59.702 40.000 0.00 0.00 0.00 3.01
2466 16886 4.818546 GCTGCTACATGACAATAACTGGAT 59.181 41.667 0.00 0.00 0.00 3.41
2467 16887 4.191544 GCTGCTACATGACAATAACTGGA 58.808 43.478 0.00 0.00 0.00 3.86
2468 16888 3.940852 TGCTGCTACATGACAATAACTGG 59.059 43.478 0.00 0.00 0.00 4.00
2469 16889 5.746307 ATGCTGCTACATGACAATAACTG 57.254 39.130 0.00 0.00 0.00 3.16
2470 16890 6.375174 TCAAATGCTGCTACATGACAATAACT 59.625 34.615 0.00 0.00 0.00 2.24
2471 16891 6.554419 TCAAATGCTGCTACATGACAATAAC 58.446 36.000 0.00 0.00 0.00 1.89
2472 16892 6.756299 TCAAATGCTGCTACATGACAATAA 57.244 33.333 0.00 0.00 0.00 1.40
2473 16893 6.756299 TTCAAATGCTGCTACATGACAATA 57.244 33.333 0.00 0.00 0.00 1.90
2474 16894 5.648178 TTCAAATGCTGCTACATGACAAT 57.352 34.783 0.00 0.00 0.00 2.71
2475 16895 5.450592 TTTCAAATGCTGCTACATGACAA 57.549 34.783 0.00 0.00 0.00 3.18
2476 16896 5.221204 TGTTTTCAAATGCTGCTACATGACA 60.221 36.000 0.00 0.00 0.00 3.58
2477 16897 5.117592 GTGTTTTCAAATGCTGCTACATGAC 59.882 40.000 0.00 0.00 0.00 3.06
2478 16898 5.221880 GTGTTTTCAAATGCTGCTACATGA 58.778 37.500 0.00 0.00 0.00 3.07
2479 16899 4.386652 GGTGTTTTCAAATGCTGCTACATG 59.613 41.667 0.00 0.00 0.00 3.21
2480 16900 4.281688 AGGTGTTTTCAAATGCTGCTACAT 59.718 37.500 0.00 0.00 0.00 2.29
2481 16901 3.636300 AGGTGTTTTCAAATGCTGCTACA 59.364 39.130 0.00 0.00 0.00 2.74
2482 16902 3.983344 CAGGTGTTTTCAAATGCTGCTAC 59.017 43.478 0.00 0.00 0.00 3.58
2483 16903 3.005684 CCAGGTGTTTTCAAATGCTGCTA 59.994 43.478 0.00 0.00 0.00 3.49
2484 16904 2.224113 CCAGGTGTTTTCAAATGCTGCT 60.224 45.455 0.00 0.00 0.00 4.24
2485 16905 2.137523 CCAGGTGTTTTCAAATGCTGC 58.862 47.619 0.00 0.00 0.00 5.25
2486 16906 3.731652 TCCAGGTGTTTTCAAATGCTG 57.268 42.857 0.00 0.00 0.00 4.41
2487 16907 4.751767 TTTCCAGGTGTTTTCAAATGCT 57.248 36.364 0.00 0.00 0.00 3.79
2488 16908 7.489574 TTATTTTCCAGGTGTTTTCAAATGC 57.510 32.000 0.00 0.00 0.00 3.56
2489 16909 9.054922 ACATTATTTTCCAGGTGTTTTCAAATG 57.945 29.630 0.00 0.00 0.00 2.32
2490 16910 9.625747 AACATTATTTTCCAGGTGTTTTCAAAT 57.374 25.926 0.00 0.00 0.00 2.32
2491 16911 8.887717 CAACATTATTTTCCAGGTGTTTTCAAA 58.112 29.630 0.00 0.00 0.00 2.69
2492 16912 7.011857 GCAACATTATTTTCCAGGTGTTTTCAA 59.988 33.333 0.00 0.00 0.00 2.69
2493 16913 6.481644 GCAACATTATTTTCCAGGTGTTTTCA 59.518 34.615 0.00 0.00 0.00 2.69
2494 16914 6.346518 CGCAACATTATTTTCCAGGTGTTTTC 60.347 38.462 0.00 0.00 0.00 2.29
2495 16915 5.465056 CGCAACATTATTTTCCAGGTGTTTT 59.535 36.000 0.00 0.00 0.00 2.43
2496 16916 4.987912 CGCAACATTATTTTCCAGGTGTTT 59.012 37.500 0.00 0.00 0.00 2.83
2497 16917 4.555262 CGCAACATTATTTTCCAGGTGTT 58.445 39.130 0.00 0.00 0.00 3.32
2498 16918 3.613910 GCGCAACATTATTTTCCAGGTGT 60.614 43.478 0.30 0.00 0.00 4.16
2499 16919 2.923020 GCGCAACATTATTTTCCAGGTG 59.077 45.455 0.30 0.00 0.00 4.00
2500 16920 2.094234 GGCGCAACATTATTTTCCAGGT 60.094 45.455 10.83 0.00 0.00 4.00
2501 16921 2.094286 TGGCGCAACATTATTTTCCAGG 60.094 45.455 10.83 0.00 0.00 4.45
2502 16922 3.229276 TGGCGCAACATTATTTTCCAG 57.771 42.857 10.83 0.00 0.00 3.86
2503 16923 3.056250 ACATGGCGCAACATTATTTTCCA 60.056 39.130 10.83 0.00 0.00 3.53
2504 16924 3.306703 CACATGGCGCAACATTATTTTCC 59.693 43.478 10.83 0.00 0.00 3.13
2505 16925 3.306703 CCACATGGCGCAACATTATTTTC 59.693 43.478 10.83 0.00 0.00 2.29
2506 16926 3.260740 CCACATGGCGCAACATTATTTT 58.739 40.909 10.83 0.00 0.00 1.82
2507 16927 2.233431 ACCACATGGCGCAACATTATTT 59.767 40.909 10.83 0.00 39.32 1.40
2508 16928 1.824230 ACCACATGGCGCAACATTATT 59.176 42.857 10.83 0.00 39.32 1.40
2509 16929 1.473258 ACCACATGGCGCAACATTAT 58.527 45.000 10.83 0.00 39.32 1.28
2510 16930 2.115343 TACCACATGGCGCAACATTA 57.885 45.000 10.83 0.00 39.32 1.90
2511 16931 1.473258 ATACCACATGGCGCAACATT 58.527 45.000 10.83 0.00 39.32 2.71
2512 16932 2.340210 TATACCACATGGCGCAACAT 57.660 45.000 10.83 0.46 39.32 2.71
2513 16933 2.340210 ATATACCACATGGCGCAACA 57.660 45.000 10.83 0.00 39.32 3.33
2514 16934 5.584649 ACATATATATACCACATGGCGCAAC 59.415 40.000 10.83 0.00 39.32 4.17
2515 16935 5.739959 ACATATATATACCACATGGCGCAA 58.260 37.500 10.83 0.00 39.32 4.85
2516 16936 5.351948 ACATATATATACCACATGGCGCA 57.648 39.130 10.83 0.00 39.32 6.09
2517 16937 5.007626 CCAACATATATATACCACATGGCGC 59.992 44.000 0.00 0.00 39.32 6.53
2518 16938 6.345298 TCCAACATATATATACCACATGGCG 58.655 40.000 0.00 0.00 39.32 5.69
2519 16939 7.829211 AGTTCCAACATATATATACCACATGGC 59.171 37.037 0.00 0.00 39.32 4.40
2520 16940 9.383519 GAGTTCCAACATATATATACCACATGG 57.616 37.037 0.00 0.00 42.17 3.66
2521 16941 9.087424 CGAGTTCCAACATATATATACCACATG 57.913 37.037 0.00 0.00 0.00 3.21
2522 16942 7.764443 GCGAGTTCCAACATATATATACCACAT 59.236 37.037 0.00 0.00 0.00 3.21
2523 16943 7.039293 AGCGAGTTCCAACATATATATACCACA 60.039 37.037 0.00 0.00 0.00 4.17
2524 16944 7.321153 AGCGAGTTCCAACATATATATACCAC 58.679 38.462 0.00 0.00 0.00 4.16
2525 16945 7.476540 AGCGAGTTCCAACATATATATACCA 57.523 36.000 0.00 0.00 0.00 3.25
2526 16946 6.691818 CGAGCGAGTTCCAACATATATATACC 59.308 42.308 0.00 0.00 0.00 2.73
2527 16947 7.249147 ACGAGCGAGTTCCAACATATATATAC 58.751 38.462 0.00 0.00 0.00 1.47
2528 16948 7.387119 ACGAGCGAGTTCCAACATATATATA 57.613 36.000 0.00 0.00 0.00 0.86
2529 16949 6.268825 ACGAGCGAGTTCCAACATATATAT 57.731 37.500 0.00 0.00 0.00 0.86
2530 16950 5.700722 ACGAGCGAGTTCCAACATATATA 57.299 39.130 0.00 0.00 0.00 0.86
2531 16951 4.585955 ACGAGCGAGTTCCAACATATAT 57.414 40.909 0.00 0.00 0.00 0.86
2532 16952 4.818005 TCTACGAGCGAGTTCCAACATATA 59.182 41.667 0.00 0.00 0.00 0.86
2533 16953 2.961526 ACGAGCGAGTTCCAACATAT 57.038 45.000 0.00 0.00 0.00 1.78
2534 16954 3.011818 TCTACGAGCGAGTTCCAACATA 58.988 45.455 0.00 0.00 0.00 2.29
2535 16955 1.816835 TCTACGAGCGAGTTCCAACAT 59.183 47.619 0.00 0.00 0.00 2.71
2536 16956 1.241165 TCTACGAGCGAGTTCCAACA 58.759 50.000 0.00 0.00 0.00 3.33
2537 16957 2.342910 TTCTACGAGCGAGTTCCAAC 57.657 50.000 0.00 0.00 0.00 3.77
2538 16958 2.416836 CCATTCTACGAGCGAGTTCCAA 60.417 50.000 0.00 0.00 0.00 3.53
2539 16959 1.134367 CCATTCTACGAGCGAGTTCCA 59.866 52.381 0.00 0.00 0.00 3.53
2540 16960 1.404391 TCCATTCTACGAGCGAGTTCC 59.596 52.381 0.00 0.00 0.00 3.62
2541 16961 2.846039 TCCATTCTACGAGCGAGTTC 57.154 50.000 0.00 0.00 0.00 3.01
2542 16962 2.688446 TGATCCATTCTACGAGCGAGTT 59.312 45.455 0.00 0.00 0.00 3.01
2543 16963 2.033550 GTGATCCATTCTACGAGCGAGT 59.966 50.000 0.00 0.00 0.00 4.18
2544 16964 2.033424 TGTGATCCATTCTACGAGCGAG 59.967 50.000 0.00 0.00 0.00 5.03
2545 16965 2.021457 TGTGATCCATTCTACGAGCGA 58.979 47.619 0.00 0.00 0.00 4.93
2546 16966 2.492019 TGTGATCCATTCTACGAGCG 57.508 50.000 0.00 0.00 0.00 5.03
2547 16967 3.982475 TGATGTGATCCATTCTACGAGC 58.018 45.455 0.00 0.00 32.56 5.03
2548 16968 6.908870 TTTTGATGTGATCCATTCTACGAG 57.091 37.500 0.00 0.00 32.56 4.18
2549 16969 7.275183 AGATTTTGATGTGATCCATTCTACGA 58.725 34.615 0.00 0.00 32.56 3.43
2550 16970 7.225341 TGAGATTTTGATGTGATCCATTCTACG 59.775 37.037 0.00 0.00 32.56 3.51
2551 16971 8.341173 GTGAGATTTTGATGTGATCCATTCTAC 58.659 37.037 0.00 0.00 32.56 2.59
2552 16972 8.048514 TGTGAGATTTTGATGTGATCCATTCTA 58.951 33.333 0.00 0.00 32.56 2.10
2553 16973 6.888088 TGTGAGATTTTGATGTGATCCATTCT 59.112 34.615 0.00 0.00 32.56 2.40
2554 16974 7.092137 TGTGAGATTTTGATGTGATCCATTC 57.908 36.000 0.00 0.00 32.56 2.67
2555 16975 7.470935 TTGTGAGATTTTGATGTGATCCATT 57.529 32.000 0.00 0.00 32.56 3.16
2556 16976 7.039574 TGTTTGTGAGATTTTGATGTGATCCAT 60.040 33.333 0.00 0.00 36.13 3.41
2557 16977 6.264970 TGTTTGTGAGATTTTGATGTGATCCA 59.735 34.615 0.00 0.00 0.00 3.41
2558 16978 6.583806 GTGTTTGTGAGATTTTGATGTGATCC 59.416 38.462 0.00 0.00 0.00 3.36
2559 16979 7.140705 TGTGTTTGTGAGATTTTGATGTGATC 58.859 34.615 0.00 0.00 0.00 2.92
2560 16980 7.041635 TGTGTTTGTGAGATTTTGATGTGAT 57.958 32.000 0.00 0.00 0.00 3.06
2561 16981 6.448207 TGTGTTTGTGAGATTTTGATGTGA 57.552 33.333 0.00 0.00 0.00 3.58
2562 16982 6.291955 GCTTGTGTTTGTGAGATTTTGATGTG 60.292 38.462 0.00 0.00 0.00 3.21
2563 16983 5.750067 GCTTGTGTTTGTGAGATTTTGATGT 59.250 36.000 0.00 0.00 0.00 3.06
2564 16984 5.749588 TGCTTGTGTTTGTGAGATTTTGATG 59.250 36.000 0.00 0.00 0.00 3.07
2565 16985 5.750067 GTGCTTGTGTTTGTGAGATTTTGAT 59.250 36.000 0.00 0.00 0.00 2.57
2566 16986 5.101628 GTGCTTGTGTTTGTGAGATTTTGA 58.898 37.500 0.00 0.00 0.00 2.69
2567 16987 4.863689 TGTGCTTGTGTTTGTGAGATTTTG 59.136 37.500 0.00 0.00 0.00 2.44
2568 16988 4.864247 GTGTGCTTGTGTTTGTGAGATTTT 59.136 37.500 0.00 0.00 0.00 1.82
2569 16989 4.082300 TGTGTGCTTGTGTTTGTGAGATTT 60.082 37.500 0.00 0.00 0.00 2.17
2570 16990 3.443329 TGTGTGCTTGTGTTTGTGAGATT 59.557 39.130 0.00 0.00 0.00 2.40
2571 16991 3.016031 TGTGTGCTTGTGTTTGTGAGAT 58.984 40.909 0.00 0.00 0.00 2.75
2572 16992 2.161410 GTGTGTGCTTGTGTTTGTGAGA 59.839 45.455 0.00 0.00 0.00 3.27
2573 16993 2.518949 GTGTGTGCTTGTGTTTGTGAG 58.481 47.619 0.00 0.00 0.00 3.51
2574 16994 1.135831 CGTGTGTGCTTGTGTTTGTGA 60.136 47.619 0.00 0.00 0.00 3.58
2575 16995 1.135831 TCGTGTGTGCTTGTGTTTGTG 60.136 47.619 0.00 0.00 0.00 3.33
2576 16996 1.160989 TCGTGTGTGCTTGTGTTTGT 58.839 45.000 0.00 0.00 0.00 2.83
2577 16997 2.254918 TTCGTGTGTGCTTGTGTTTG 57.745 45.000 0.00 0.00 0.00 2.93
2578 16998 2.999507 TTTCGTGTGTGCTTGTGTTT 57.000 40.000 0.00 0.00 0.00 2.83
2579 16999 2.983803 GTTTTTCGTGTGTGCTTGTGTT 59.016 40.909 0.00 0.00 0.00 3.32
2580 17000 2.030717 TGTTTTTCGTGTGTGCTTGTGT 60.031 40.909 0.00 0.00 0.00 3.72
2581 17001 2.590073 TGTTTTTCGTGTGTGCTTGTG 58.410 42.857 0.00 0.00 0.00 3.33
2582 17002 2.862512 CTGTTTTTCGTGTGTGCTTGT 58.137 42.857 0.00 0.00 0.00 3.16
2583 17003 1.583404 GCTGTTTTTCGTGTGTGCTTG 59.417 47.619 0.00 0.00 0.00 4.01
2584 17004 1.469079 GGCTGTTTTTCGTGTGTGCTT 60.469 47.619 0.00 0.00 0.00 3.91
2585 17005 0.100503 GGCTGTTTTTCGTGTGTGCT 59.899 50.000 0.00 0.00 0.00 4.40
2586 17006 0.869880 GGGCTGTTTTTCGTGTGTGC 60.870 55.000 0.00 0.00 0.00 4.57
2587 17007 0.591236 CGGGCTGTTTTTCGTGTGTG 60.591 55.000 0.00 0.00 0.00 3.82
2588 17008 0.745128 TCGGGCTGTTTTTCGTGTGT 60.745 50.000 0.00 0.00 0.00 3.72
2589 17009 0.041312 CTCGGGCTGTTTTTCGTGTG 60.041 55.000 0.00 0.00 0.00 3.82
2590 17010 0.179067 TCTCGGGCTGTTTTTCGTGT 60.179 50.000 0.00 0.00 0.00 4.49
2591 17011 0.512952 CTCTCGGGCTGTTTTTCGTG 59.487 55.000 0.00 0.00 0.00 4.35
2592 17012 0.106149 ACTCTCGGGCTGTTTTTCGT 59.894 50.000 0.00 0.00 0.00 3.85
2593 17013 0.512952 CACTCTCGGGCTGTTTTTCG 59.487 55.000 0.00 0.00 0.00 3.46
2594 17014 1.594331 ACACTCTCGGGCTGTTTTTC 58.406 50.000 0.00 0.00 0.00 2.29
2595 17015 2.052782 AACACTCTCGGGCTGTTTTT 57.947 45.000 0.00 0.00 0.00 1.94
2596 17016 2.490991 GTAACACTCTCGGGCTGTTTT 58.509 47.619 3.80 0.00 30.76 2.43
2597 17017 1.270678 GGTAACACTCTCGGGCTGTTT 60.271 52.381 3.80 0.00 30.76 2.83
2598 17018 0.320697 GGTAACACTCTCGGGCTGTT 59.679 55.000 3.94 3.94 32.85 3.16
2599 17019 0.542232 AGGTAACACTCTCGGGCTGT 60.542 55.000 0.00 0.00 41.41 4.40
2600 17020 0.173708 GAGGTAACACTCTCGGGCTG 59.826 60.000 0.00 0.00 41.41 4.85
2601 17021 0.251653 TGAGGTAACACTCTCGGGCT 60.252 55.000 0.00 0.00 38.32 5.19
2602 17022 0.173708 CTGAGGTAACACTCTCGGGC 59.826 60.000 0.00 0.00 38.32 6.13
2603 17023 0.173708 GCTGAGGTAACACTCTCGGG 59.826 60.000 0.00 0.00 38.32 5.14
2604 17024 0.173708 GGCTGAGGTAACACTCTCGG 59.826 60.000 0.00 0.00 38.32 4.63
2605 17025 0.179161 CGGCTGAGGTAACACTCTCG 60.179 60.000 0.00 0.00 38.32 4.04
2606 17026 0.458716 GCGGCTGAGGTAACACTCTC 60.459 60.000 0.00 0.00 38.32 3.20
2607 17027 1.592223 GCGGCTGAGGTAACACTCT 59.408 57.895 0.00 0.00 38.32 3.24
2608 17028 1.448013 GGCGGCTGAGGTAACACTC 60.448 63.158 0.00 0.00 41.41 3.51
2609 17029 2.663196 GGCGGCTGAGGTAACACT 59.337 61.111 0.00 0.00 41.41 3.55
2610 17030 2.813908 CGGCGGCTGAGGTAACAC 60.814 66.667 7.61 0.00 41.41 3.32
2611 17031 4.752879 GCGGCGGCTGAGGTAACA 62.753 66.667 14.15 0.00 35.62 2.41
2624 17044 2.841988 ATGAGAGGAGGAGGCGGC 60.842 66.667 0.00 0.00 0.00 6.53
2625 17045 2.206536 GGATGAGAGGAGGAGGCGG 61.207 68.421 0.00 0.00 0.00 6.13
2626 17046 1.045350 TTGGATGAGAGGAGGAGGCG 61.045 60.000 0.00 0.00 0.00 5.52
2627 17047 1.207791 TTTGGATGAGAGGAGGAGGC 58.792 55.000 0.00 0.00 0.00 4.70
2628 17048 2.573462 TGTTTTGGATGAGAGGAGGAGG 59.427 50.000 0.00 0.00 0.00 4.30
2629 17049 3.988976 TGTTTTGGATGAGAGGAGGAG 57.011 47.619 0.00 0.00 0.00 3.69
2630 17050 4.655963 CTTTGTTTTGGATGAGAGGAGGA 58.344 43.478 0.00 0.00 0.00 3.71
2631 17051 3.192212 GCTTTGTTTTGGATGAGAGGAGG 59.808 47.826 0.00 0.00 0.00 4.30
2632 17052 4.077822 AGCTTTGTTTTGGATGAGAGGAG 58.922 43.478 0.00 0.00 0.00 3.69
2633 17053 4.104383 AGCTTTGTTTTGGATGAGAGGA 57.896 40.909 0.00 0.00 0.00 3.71
2634 17054 4.397417 CCTAGCTTTGTTTTGGATGAGAGG 59.603 45.833 0.00 0.00 0.00 3.69
2635 17055 4.397417 CCCTAGCTTTGTTTTGGATGAGAG 59.603 45.833 0.00 0.00 0.00 3.20
2636 17056 4.202567 ACCCTAGCTTTGTTTTGGATGAGA 60.203 41.667 0.00 0.00 0.00 3.27
2637 17057 4.082125 ACCCTAGCTTTGTTTTGGATGAG 58.918 43.478 0.00 0.00 0.00 2.90
2638 17058 4.112634 ACCCTAGCTTTGTTTTGGATGA 57.887 40.909 0.00 0.00 0.00 2.92
2639 17059 4.871933 AACCCTAGCTTTGTTTTGGATG 57.128 40.909 0.00 0.00 0.00 3.51
2640 17060 4.653801 ACAAACCCTAGCTTTGTTTTGGAT 59.346 37.500 9.77 0.00 38.43 3.41
2641 17061 4.027437 ACAAACCCTAGCTTTGTTTTGGA 58.973 39.130 9.77 0.00 38.43 3.53
2642 17062 4.119136 CACAAACCCTAGCTTTGTTTTGG 58.881 43.478 11.98 1.60 39.34 3.28
2643 17063 3.555547 GCACAAACCCTAGCTTTGTTTTG 59.444 43.478 11.98 0.00 39.34 2.44
2644 17064 3.431626 GGCACAAACCCTAGCTTTGTTTT 60.432 43.478 11.98 0.00 39.34 2.43
2645 17065 2.102420 GGCACAAACCCTAGCTTTGTTT 59.898 45.455 11.98 0.00 39.34 2.83
2646 17066 1.686587 GGCACAAACCCTAGCTTTGTT 59.313 47.619 11.98 0.00 39.34 2.83
2647 17067 1.133482 AGGCACAAACCCTAGCTTTGT 60.133 47.619 9.77 9.77 41.52 2.83
2648 17068 1.541588 GAGGCACAAACCCTAGCTTTG 59.458 52.381 0.00 8.76 35.17 2.77
2649 17069 1.425448 AGAGGCACAAACCCTAGCTTT 59.575 47.619 0.00 0.00 31.41 3.51
2650 17070 1.003696 GAGAGGCACAAACCCTAGCTT 59.996 52.381 0.00 0.00 31.41 3.74
2651 17071 0.615850 GAGAGGCACAAACCCTAGCT 59.384 55.000 0.00 0.00 31.41 3.32
2652 17072 0.741221 CGAGAGGCACAAACCCTAGC 60.741 60.000 0.00 0.00 31.41 3.42
2653 17073 0.741221 GCGAGAGGCACAAACCCTAG 60.741 60.000 0.00 0.00 42.87 3.02
2654 17074 1.295423 GCGAGAGGCACAAACCCTA 59.705 57.895 0.00 0.00 42.87 3.53
2655 17075 2.032681 GCGAGAGGCACAAACCCT 59.967 61.111 0.00 0.00 42.87 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.