Multiple sequence alignment - TraesCS3D01G067100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G067100 chr3D 100.000 2646 0 0 1 2646 29790785 29788140 0.000000e+00 4887.0
1 TraesCS3D01G067100 chr3D 89.257 754 52 15 632 1365 29812852 29812108 0.000000e+00 917.0
2 TraesCS3D01G067100 chr3D 90.857 700 39 7 631 1323 29861898 29861217 0.000000e+00 915.0
3 TraesCS3D01G067100 chr3D 89.762 713 49 8 659 1365 29801301 29800607 0.000000e+00 891.0
4 TraesCS3D01G067100 chr3D 81.809 1039 103 35 704 1689 299744815 299745820 0.000000e+00 793.0
5 TraesCS3D01G067100 chr3D 90.312 320 21 7 314 626 29813214 29812898 6.820000e-111 411.0
6 TraesCS3D01G067100 chr3D 91.463 246 21 0 1 246 29793553 29793798 3.260000e-89 339.0
7 TraesCS3D01G067100 chr3D 90.204 245 24 0 1 245 116051778 116051534 1.180000e-83 320.0
8 TraesCS3D01G067100 chr3D 89.113 248 25 2 1 247 310410414 310410660 9.200000e-80 307.0
9 TraesCS3D01G067100 chr3D 87.562 201 20 4 2080 2279 29799771 29799575 7.370000e-56 228.0
10 TraesCS3D01G067100 chr3D 85.946 185 12 8 456 626 29862118 29861934 4.500000e-43 185.0
11 TraesCS3D01G067100 chr3D 93.103 116 5 2 399 511 29801576 29801461 1.630000e-37 167.0
12 TraesCS3D01G067100 chr3D 93.103 116 5 3 2018 2131 29811616 29811502 1.630000e-37 167.0
13 TraesCS3D01G067100 chr3D 91.919 99 7 1 1587 1685 29861103 29861006 1.280000e-28 137.0
14 TraesCS3D01G067100 chr3D 89.691 97 8 2 2401 2495 29811357 29811261 3.580000e-24 122.0
15 TraesCS3D01G067100 chr3D 90.217 92 8 1 2401 2491 299746414 299746505 4.630000e-23 119.0
16 TraesCS3D01G067100 chr3D 83.333 114 13 4 2538 2646 591932472 591932360 1.680000e-17 100.0
17 TraesCS3D01G067100 chr3A 90.763 747 43 12 628 1365 40390445 40389716 0.000000e+00 974.0
18 TraesCS3D01G067100 chr3A 90.553 741 49 11 631 1365 40556565 40555840 0.000000e+00 961.0
19 TraesCS3D01G067100 chr3A 81.196 1037 105 43 707 1689 436274402 436273402 0.000000e+00 752.0
20 TraesCS3D01G067100 chr3A 90.840 262 21 2 2018 2279 40389224 40388966 5.420000e-92 348.0
21 TraesCS3D01G067100 chr3A 87.308 260 18 8 380 625 40556860 40556602 1.550000e-72 283.0
22 TraesCS3D01G067100 chr3A 91.667 144 9 2 1860 2001 40389355 40389213 2.080000e-46 196.0
23 TraesCS3D01G067100 chr3A 82.573 241 17 10 399 626 40390722 40390494 3.480000e-44 189.0
24 TraesCS3D01G067100 chr3A 85.263 190 10 10 1479 1666 40389685 40389512 2.090000e-41 180.0
25 TraesCS3D01G067100 chr3A 92.473 93 6 1 2402 2493 40388954 40388862 5.940000e-27 132.0
26 TraesCS3D01G067100 chr3A 96.875 32 1 0 2493 2524 40388839 40388808 1.000000e-03 54.7
27 TraesCS3D01G067100 chr3B 90.688 741 47 7 631 1365 50654806 50654082 0.000000e+00 966.0
28 TraesCS3D01G067100 chr3B 88.742 755 51 15 626 1365 50942741 50943476 0.000000e+00 893.0
29 TraesCS3D01G067100 chr3B 88.936 705 55 9 680 1365 50959693 50958993 0.000000e+00 848.0
30 TraesCS3D01G067100 chr3B 89.276 373 25 7 268 626 50942326 50942697 1.120000e-123 453.0
31 TraesCS3D01G067100 chr3B 92.562 242 17 1 631 872 50959932 50959692 1.950000e-91 346.0
32 TraesCS3D01G067100 chr3B 79.837 367 42 18 284 624 50655204 50654844 3.400000e-59 239.0
33 TraesCS3D01G067100 chr3B 78.892 379 47 19 275 626 50960340 50959968 2.650000e-55 226.0
34 TraesCS3D01G067100 chr3B 82.963 270 20 8 2018 2262 50943915 50944183 1.230000e-53 220.0
35 TraesCS3D01G067100 chr3B 84.699 183 12 9 1479 1661 50943494 50943660 4.530000e-38 169.0
36 TraesCS3D01G067100 chr3B 88.034 117 8 3 1588 1704 50653841 50653731 1.650000e-27 134.0
37 TraesCS3D01G067100 chr3B 87.619 105 10 3 2170 2273 51010226 51010124 4.630000e-23 119.0
38 TraesCS3D01G067100 chr3B 92.647 68 5 0 2419 2486 50952360 50952427 6.030000e-17 99.0
39 TraesCS3D01G067100 chr3B 84.615 91 14 0 2401 2491 421530801 421530711 1.010000e-14 91.6
40 TraesCS3D01G067100 chr7B 89.700 699 58 10 677 1365 707946989 707946295 0.000000e+00 880.0
41 TraesCS3D01G067100 chr7B 88.014 292 17 6 352 626 707947657 707947367 1.960000e-86 329.0
42 TraesCS3D01G067100 chr1D 91.837 245 19 1 1 245 14686958 14687201 9.070000e-90 340.0
43 TraesCS3D01G067100 chr1D 90.947 243 21 1 3 245 14670712 14670471 2.540000e-85 326.0
44 TraesCS3D01G067100 chr1D 89.919 248 22 2 1 247 481987690 481987935 1.530000e-82 316.0
45 TraesCS3D01G067100 chr1D 89.388 245 25 1 1 245 198494009 198493766 9.200000e-80 307.0
46 TraesCS3D01G067100 chr7D 90.204 245 23 1 1 244 72149479 72149235 4.250000e-83 318.0
47 TraesCS3D01G067100 chr7D 86.508 126 15 2 2521 2646 500150585 500150708 1.280000e-28 137.0
48 TraesCS3D01G067100 chr7D 85.047 107 11 3 2544 2646 59988339 59988234 1.300000e-18 104.0
49 TraesCS3D01G067100 chr2D 90.083 242 23 1 4 245 476786668 476786428 1.980000e-81 313.0
50 TraesCS3D01G067100 chr6D 88.550 131 13 2 2518 2646 83206708 83206838 9.800000e-35 158.0
51 TraesCS3D01G067100 chr6D 85.047 107 11 3 2544 2646 18249473 18249368 1.300000e-18 104.0
52 TraesCS3D01G067100 chr6D 84.112 107 12 3 2544 2646 85925966 85926071 6.030000e-17 99.0
53 TraesCS3D01G067100 chr7A 87.597 129 15 1 2519 2646 183842925 183843053 5.900000e-32 148.0
54 TraesCS3D01G067100 chrUn 83.186 113 13 4 2539 2646 29063823 29063712 6.030000e-17 99.0
55 TraesCS3D01G067100 chrUn 84.112 107 12 4 2544 2646 232649681 232649576 6.030000e-17 99.0
56 TraesCS3D01G067100 chr6A 95.556 45 0 2 2520 2562 34687359 34687315 1.310000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G067100 chr3D 29788140 29790785 2645 True 4887.000000 4887 100.000000 1 2646 1 chr3D.!!$R1 2645
1 TraesCS3D01G067100 chr3D 299744815 299746505 1690 False 456.000000 793 86.013000 704 2491 2 chr3D.!!$F3 1787
2 TraesCS3D01G067100 chr3D 29799575 29801576 2001 True 428.666667 891 90.142333 399 2279 3 chr3D.!!$R4 1880
3 TraesCS3D01G067100 chr3D 29861006 29862118 1112 True 412.333333 915 89.574000 456 1685 3 chr3D.!!$R6 1229
4 TraesCS3D01G067100 chr3D 29811261 29813214 1953 True 404.250000 917 90.590750 314 2495 4 chr3D.!!$R5 2181
5 TraesCS3D01G067100 chr3A 436273402 436274402 1000 True 752.000000 752 81.196000 707 1689 1 chr3A.!!$R1 982
6 TraesCS3D01G067100 chr3A 40555840 40556860 1020 True 622.000000 961 88.930500 380 1365 2 chr3A.!!$R3 985
7 TraesCS3D01G067100 chr3A 40388808 40390722 1914 True 296.242857 974 90.064857 399 2524 7 chr3A.!!$R2 2125
8 TraesCS3D01G067100 chr3B 50958993 50960340 1347 True 473.333333 848 86.796667 275 1365 3 chr3B.!!$R4 1090
9 TraesCS3D01G067100 chr3B 50653731 50655204 1473 True 446.333333 966 86.186333 284 1704 3 chr3B.!!$R3 1420
10 TraesCS3D01G067100 chr3B 50942326 50944183 1857 False 433.750000 893 86.420000 268 2262 4 chr3B.!!$F2 1994
11 TraesCS3D01G067100 chr7B 707946295 707947657 1362 True 604.500000 880 88.857000 352 1365 2 chr7B.!!$R1 1013

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
52 53 0.034477 CCATGGCGGTAGACCCTTTT 60.034 55.0 0.00 0.00 0.00 2.27 F
113 114 0.178915 TACCTACCGCCATAGCCCAT 60.179 55.0 0.00 0.00 34.57 4.00 F
1161 1807 0.037326 TGTCGAAGGTCATGAGCCAC 60.037 55.0 20.92 13.81 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1142 1788 0.037326 GTGGCTCATGACCTTCGACA 60.037 55.0 13.32 0.26 0.00 4.35 R
1323 2001 0.179094 AGATTCGTTTGCCGGCGATA 60.179 50.0 23.90 6.81 36.97 2.92 R
2611 3882 0.032912 TACCCCCAGCGACTATGTGA 60.033 55.0 0.00 0.00 0.00 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.445832 TGGCGGTAGGCTTCAGTA 57.554 55.556 0.00 0.00 44.18 2.74
18 19 1.895238 TGGCGGTAGGCTTCAGTAC 59.105 57.895 0.00 0.00 44.18 2.73
19 20 1.143401 GGCGGTAGGCTTCAGTACC 59.857 63.158 0.00 0.00 42.94 3.34
20 21 1.143401 GCGGTAGGCTTCAGTACCC 59.857 63.158 0.00 0.00 36.12 3.69
21 22 1.328430 GCGGTAGGCTTCAGTACCCT 61.328 60.000 0.00 0.00 36.12 4.34
22 23 2.025863 GCGGTAGGCTTCAGTACCCTA 61.026 57.143 0.00 0.00 36.12 3.53
23 24 1.680207 CGGTAGGCTTCAGTACCCTAC 59.320 57.143 13.87 13.87 46.60 3.18
25 26 1.680207 GTAGGCTTCAGTACCCTACCG 59.320 57.143 12.04 0.00 43.31 4.02
26 27 1.143401 GGCTTCAGTACCCTACCGC 59.857 63.158 0.00 0.00 0.00 5.68
27 28 1.143401 GCTTCAGTACCCTACCGCC 59.857 63.158 0.00 0.00 0.00 6.13
28 29 1.610554 GCTTCAGTACCCTACCGCCA 61.611 60.000 0.00 0.00 0.00 5.69
29 30 0.460311 CTTCAGTACCCTACCGCCAG 59.540 60.000 0.00 0.00 0.00 4.85
30 31 1.610554 TTCAGTACCCTACCGCCAGC 61.611 60.000 0.00 0.00 0.00 4.85
31 32 3.145551 AGTACCCTACCGCCAGCG 61.146 66.667 4.75 4.75 39.44 5.18
32 33 4.886121 GTACCCTACCGCCAGCGC 62.886 72.222 6.50 0.00 38.24 5.92
48 49 4.564110 GCCCATGGCGGTAGACCC 62.564 72.222 6.09 0.00 39.62 4.46
49 50 2.768344 CCCATGGCGGTAGACCCT 60.768 66.667 6.09 0.00 0.00 4.34
50 51 2.375345 CCCATGGCGGTAGACCCTT 61.375 63.158 6.09 0.00 0.00 3.95
51 52 1.607612 CCATGGCGGTAGACCCTTT 59.392 57.895 0.00 0.00 0.00 3.11
52 53 0.034477 CCATGGCGGTAGACCCTTTT 60.034 55.000 0.00 0.00 0.00 2.27
53 54 1.379527 CATGGCGGTAGACCCTTTTC 58.620 55.000 0.00 0.00 0.00 2.29
54 55 0.255033 ATGGCGGTAGACCCTTTTCC 59.745 55.000 0.00 0.00 0.00 3.13
55 56 1.128809 TGGCGGTAGACCCTTTTCCA 61.129 55.000 0.00 0.00 0.00 3.53
56 57 0.675837 GGCGGTAGACCCTTTTCCAC 60.676 60.000 0.00 0.00 0.00 4.02
57 58 1.017701 GCGGTAGACCCTTTTCCACG 61.018 60.000 0.00 0.00 0.00 4.94
58 59 0.319405 CGGTAGACCCTTTTCCACGT 59.681 55.000 0.00 0.00 0.00 4.49
59 60 1.670967 CGGTAGACCCTTTTCCACGTC 60.671 57.143 0.00 0.00 0.00 4.34
60 61 1.345415 GGTAGACCCTTTTCCACGTCA 59.655 52.381 0.00 0.00 0.00 4.35
61 62 2.612221 GGTAGACCCTTTTCCACGTCAG 60.612 54.545 0.00 0.00 0.00 3.51
62 63 0.250338 AGACCCTTTTCCACGTCAGC 60.250 55.000 0.00 0.00 0.00 4.26
63 64 0.534203 GACCCTTTTCCACGTCAGCA 60.534 55.000 0.00 0.00 0.00 4.41
64 65 0.818040 ACCCTTTTCCACGTCAGCAC 60.818 55.000 0.00 0.00 0.00 4.40
90 91 3.986006 GGCCGTCAGTCACCGTCA 61.986 66.667 0.00 0.00 0.00 4.35
91 92 2.028484 GCCGTCAGTCACCGTCAA 59.972 61.111 0.00 0.00 0.00 3.18
92 93 2.022129 GCCGTCAGTCACCGTCAAG 61.022 63.158 0.00 0.00 0.00 3.02
110 111 1.670015 GGTACCTACCGCCATAGCC 59.330 63.158 4.06 0.00 36.50 3.93
111 112 1.670015 GTACCTACCGCCATAGCCC 59.330 63.158 0.00 0.00 34.57 5.19
112 113 1.117142 GTACCTACCGCCATAGCCCA 61.117 60.000 0.00 0.00 34.57 5.36
113 114 0.178915 TACCTACCGCCATAGCCCAT 60.179 55.000 0.00 0.00 34.57 4.00
114 115 1.003355 CCTACCGCCATAGCCCATG 60.003 63.158 0.00 0.00 34.57 3.66
125 126 4.910585 GCCCATGGCGGTAGGACG 62.911 72.222 6.09 0.00 39.62 4.79
126 127 3.467226 CCCATGGCGGTAGGACGT 61.467 66.667 6.09 0.00 35.98 4.34
127 128 2.202878 CCATGGCGGTAGGACGTG 60.203 66.667 0.00 0.00 40.64 4.49
128 129 2.890474 CATGGCGGTAGGACGTGC 60.890 66.667 0.00 0.00 32.89 5.34
129 130 3.387091 ATGGCGGTAGGACGTGCA 61.387 61.111 10.52 0.00 35.98 4.57
130 131 2.949909 ATGGCGGTAGGACGTGCAA 61.950 57.895 10.52 0.00 35.98 4.08
131 132 2.357760 GGCGGTAGGACGTGCAAA 60.358 61.111 10.52 0.00 35.98 3.68
132 133 2.674084 GGCGGTAGGACGTGCAAAC 61.674 63.158 10.52 6.94 35.98 2.93
133 134 2.674084 GCGGTAGGACGTGCAAACC 61.674 63.158 17.96 17.96 35.98 3.27
134 135 1.005394 CGGTAGGACGTGCAAACCT 60.005 57.895 22.85 12.68 37.76 3.50
135 136 0.244450 CGGTAGGACGTGCAAACCTA 59.756 55.000 22.85 11.77 35.52 3.08
137 138 1.718396 GTAGGACGTGCAAACCTACC 58.282 55.000 23.35 12.55 45.85 3.18
138 139 0.244450 TAGGACGTGCAAACCTACCG 59.756 55.000 10.52 0.58 35.52 4.02
139 140 2.674084 GGACGTGCAAACCTACCGC 61.674 63.158 0.63 0.00 0.00 5.68
140 141 2.667199 ACGTGCAAACCTACCGCC 60.667 61.111 0.00 0.00 0.00 6.13
141 142 3.784412 CGTGCAAACCTACCGCCG 61.784 66.667 0.00 0.00 0.00 6.46
142 143 4.097863 GTGCAAACCTACCGCCGC 62.098 66.667 0.00 0.00 0.00 6.53
145 146 2.437716 CAAACCTACCGCCGCCAT 60.438 61.111 0.00 0.00 0.00 4.40
146 147 2.124860 AAACCTACCGCCGCCATC 60.125 61.111 0.00 0.00 0.00 3.51
147 148 3.692370 AAACCTACCGCCGCCATCC 62.692 63.158 0.00 0.00 0.00 3.51
150 151 4.609018 CTACCGCCGCCATCCCTG 62.609 72.222 0.00 0.00 0.00 4.45
159 160 4.256180 CCATCCCTGGCGGTAGGC 62.256 72.222 0.00 0.00 44.11 3.93
167 168 2.353573 GGCGGTAGGCAAAAGGGA 59.646 61.111 0.00 0.00 46.16 4.20
168 169 2.044555 GGCGGTAGGCAAAAGGGAC 61.045 63.158 0.00 0.00 46.16 4.46
169 170 1.302993 GCGGTAGGCAAAAGGGACA 60.303 57.895 0.00 0.00 42.87 4.02
170 171 1.305930 GCGGTAGGCAAAAGGGACAG 61.306 60.000 0.00 0.00 42.87 3.51
171 172 0.323629 CGGTAGGCAAAAGGGACAGA 59.676 55.000 0.00 0.00 0.00 3.41
172 173 1.065418 CGGTAGGCAAAAGGGACAGAT 60.065 52.381 0.00 0.00 0.00 2.90
173 174 2.644676 GGTAGGCAAAAGGGACAGATC 58.355 52.381 0.00 0.00 0.00 2.75
174 175 2.644676 GTAGGCAAAAGGGACAGATCC 58.355 52.381 0.00 0.00 45.42 3.36
203 204 3.721087 TTTCAAAGAGGGGTCAGATCC 57.279 47.619 0.00 0.00 0.00 3.36
204 205 2.649742 TCAAAGAGGGGTCAGATCCT 57.350 50.000 0.00 0.00 35.82 3.24
205 206 2.191400 TCAAAGAGGGGTCAGATCCTG 58.809 52.381 0.00 0.00 32.74 3.86
206 207 2.191400 CAAAGAGGGGTCAGATCCTGA 58.809 52.381 0.00 0.00 38.25 3.86
207 208 2.573462 CAAAGAGGGGTCAGATCCTGAA 59.427 50.000 0.00 0.00 42.46 3.02
208 209 2.885388 AGAGGGGTCAGATCCTGAAT 57.115 50.000 0.00 0.00 42.46 2.57
209 210 3.142579 AGAGGGGTCAGATCCTGAATT 57.857 47.619 0.00 0.00 42.46 2.17
210 211 2.776536 AGAGGGGTCAGATCCTGAATTG 59.223 50.000 0.00 0.00 42.46 2.32
211 212 1.849039 AGGGGTCAGATCCTGAATTGG 59.151 52.381 0.00 0.00 42.46 3.16
212 213 1.566231 GGGGTCAGATCCTGAATTGGT 59.434 52.381 0.00 0.00 42.46 3.67
213 214 2.024941 GGGGTCAGATCCTGAATTGGTT 60.025 50.000 0.00 0.00 42.46 3.67
214 215 3.202151 GGGGTCAGATCCTGAATTGGTTA 59.798 47.826 0.00 0.00 42.46 2.85
215 216 4.455606 GGGTCAGATCCTGAATTGGTTAG 58.544 47.826 0.00 0.00 42.46 2.34
216 217 3.879892 GGTCAGATCCTGAATTGGTTAGC 59.120 47.826 0.00 0.00 42.46 3.09
217 218 4.517285 GTCAGATCCTGAATTGGTTAGCA 58.483 43.478 0.00 0.00 42.46 3.49
218 219 4.943705 GTCAGATCCTGAATTGGTTAGCAA 59.056 41.667 0.00 0.00 42.46 3.91
219 220 5.415701 GTCAGATCCTGAATTGGTTAGCAAA 59.584 40.000 0.00 0.00 42.46 3.68
220 221 6.009589 TCAGATCCTGAATTGGTTAGCAAAA 58.990 36.000 0.00 0.00 37.57 2.44
221 222 6.493115 TCAGATCCTGAATTGGTTAGCAAAAA 59.507 34.615 0.00 0.00 37.57 1.94
222 223 6.810182 CAGATCCTGAATTGGTTAGCAAAAAG 59.190 38.462 0.00 0.00 32.44 2.27
223 224 5.467035 TCCTGAATTGGTTAGCAAAAAGG 57.533 39.130 13.43 13.43 0.00 3.11
224 225 4.283212 TCCTGAATTGGTTAGCAAAAAGGG 59.717 41.667 17.11 11.02 0.00 3.95
225 226 4.040339 CCTGAATTGGTTAGCAAAAAGGGT 59.960 41.667 0.00 0.00 0.00 4.34
226 227 5.208463 TGAATTGGTTAGCAAAAAGGGTC 57.792 39.130 0.00 0.00 0.00 4.46
227 228 4.651503 TGAATTGGTTAGCAAAAAGGGTCA 59.348 37.500 0.00 0.00 0.00 4.02
228 229 5.129485 TGAATTGGTTAGCAAAAAGGGTCAA 59.871 36.000 0.00 0.00 0.00 3.18
229 230 5.622346 ATTGGTTAGCAAAAAGGGTCAAA 57.378 34.783 0.00 0.00 0.00 2.69
230 231 5.422214 TTGGTTAGCAAAAAGGGTCAAAA 57.578 34.783 0.00 0.00 0.00 2.44
231 232 4.760878 TGGTTAGCAAAAAGGGTCAAAAC 58.239 39.130 0.00 0.00 0.00 2.43
232 233 4.223032 TGGTTAGCAAAAAGGGTCAAAACA 59.777 37.500 0.00 0.00 0.00 2.83
233 234 5.104735 TGGTTAGCAAAAAGGGTCAAAACAT 60.105 36.000 0.00 0.00 0.00 2.71
234 235 5.236263 GGTTAGCAAAAAGGGTCAAAACATG 59.764 40.000 0.00 0.00 0.00 3.21
235 236 4.751767 AGCAAAAAGGGTCAAAACATGA 57.248 36.364 0.00 0.00 35.05 3.07
236 237 5.096443 AGCAAAAAGGGTCAAAACATGAA 57.904 34.783 0.00 0.00 40.50 2.57
237 238 5.495640 AGCAAAAAGGGTCAAAACATGAAA 58.504 33.333 0.00 0.00 40.50 2.69
238 239 6.121590 AGCAAAAAGGGTCAAAACATGAAAT 58.878 32.000 0.00 0.00 40.50 2.17
239 240 6.602803 AGCAAAAAGGGTCAAAACATGAAATT 59.397 30.769 0.00 0.00 40.50 1.82
240 241 7.122501 AGCAAAAAGGGTCAAAACATGAAATTT 59.877 29.630 0.00 0.00 40.50 1.82
241 242 7.758980 GCAAAAAGGGTCAAAACATGAAATTTT 59.241 29.630 0.00 0.00 40.50 1.82
242 243 9.074443 CAAAAAGGGTCAAAACATGAAATTTTG 57.926 29.630 11.77 11.77 44.74 2.44
243 244 6.375945 AAGGGTCAAAACATGAAATTTTGC 57.624 33.333 12.74 9.14 43.62 3.68
244 245 4.821260 AGGGTCAAAACATGAAATTTTGCC 59.179 37.500 12.74 14.86 43.62 4.52
245 246 4.578105 GGGTCAAAACATGAAATTTTGCCA 59.422 37.500 21.18 6.58 43.62 4.92
246 247 5.505489 GGGTCAAAACATGAAATTTTGCCAC 60.505 40.000 21.18 13.81 43.62 5.01
247 248 5.065731 GGTCAAAACATGAAATTTTGCCACA 59.934 36.000 18.11 0.00 43.62 4.17
248 249 6.238703 GGTCAAAACATGAAATTTTGCCACAT 60.239 34.615 18.11 0.00 43.62 3.21
249 250 6.633634 GTCAAAACATGAAATTTTGCCACATG 59.366 34.615 12.74 12.74 43.62 3.21
250 251 5.692613 AAACATGAAATTTTGCCACATGG 57.307 34.783 16.67 0.00 41.41 3.66
251 252 4.354893 ACATGAAATTTTGCCACATGGT 57.645 36.364 16.67 4.82 41.41 3.55
252 253 4.716794 ACATGAAATTTTGCCACATGGTT 58.283 34.783 16.67 0.27 41.41 3.67
253 254 4.756135 ACATGAAATTTTGCCACATGGTTC 59.244 37.500 16.67 0.00 41.41 3.62
254 255 4.686191 TGAAATTTTGCCACATGGTTCT 57.314 36.364 0.00 0.00 37.57 3.01
255 256 5.033589 TGAAATTTTGCCACATGGTTCTT 57.966 34.783 0.00 0.00 37.57 2.52
256 257 5.055812 TGAAATTTTGCCACATGGTTCTTC 58.944 37.500 0.00 0.00 37.57 2.87
257 258 4.961438 AATTTTGCCACATGGTTCTTCT 57.039 36.364 0.00 0.00 37.57 2.85
258 259 4.961438 ATTTTGCCACATGGTTCTTCTT 57.039 36.364 0.00 0.00 37.57 2.52
259 260 6.418057 AATTTTGCCACATGGTTCTTCTTA 57.582 33.333 0.00 0.00 37.57 2.10
260 261 5.860941 TTTTGCCACATGGTTCTTCTTAA 57.139 34.783 0.00 0.00 37.57 1.85
261 262 5.860941 TTTGCCACATGGTTCTTCTTAAA 57.139 34.783 0.00 0.00 37.57 1.52
262 263 5.860941 TTGCCACATGGTTCTTCTTAAAA 57.139 34.783 0.00 0.00 37.57 1.52
263 264 5.860941 TGCCACATGGTTCTTCTTAAAAA 57.139 34.783 0.00 0.00 37.57 1.94
322 325 3.909995 TGTTTGAGGAGGATTTGAGGAGA 59.090 43.478 0.00 0.00 0.00 3.71
323 326 4.019860 TGTTTGAGGAGGATTTGAGGAGAG 60.020 45.833 0.00 0.00 0.00 3.20
350 369 4.546674 TGTAGATGCTCTTACTGATGGGA 58.453 43.478 0.00 0.00 0.00 4.37
368 387 1.679944 GGAGTGCTCATTGCCAAGCTA 60.680 52.381 1.41 0.00 42.00 3.32
406 426 3.950397 TCTTCCGGCATAGACAACATTT 58.050 40.909 0.00 0.00 0.00 2.32
439 466 6.018751 CAGCATTAATAATCAGCACTACGTGT 60.019 38.462 0.00 0.00 35.75 4.49
545 596 3.643763 GACTCGGATTAACATGATCGCT 58.356 45.455 0.00 0.00 0.00 4.93
578 638 2.137395 CAAACGTACGCGCATGCAC 61.137 57.895 19.57 7.15 42.97 4.57
596 660 4.095610 TGCACGCGACAGAATATATATCG 58.904 43.478 15.93 0.00 35.91 2.92
959 1550 2.025416 CCACATTTCCCCACACATCCTA 60.025 50.000 0.00 0.00 0.00 2.94
1047 1674 0.548989 TAGCACCACCAACACCACTT 59.451 50.000 0.00 0.00 0.00 3.16
1065 1698 3.025262 ACTTCCAGTACCAGCTAGCTAC 58.975 50.000 18.86 12.64 0.00 3.58
1115 1752 1.154150 GCTTGTGATTCGCCTGCAC 60.154 57.895 6.65 0.00 0.00 4.57
1138 1784 0.390860 CAAGCTAGCTCCTATGGCGT 59.609 55.000 19.65 0.00 34.52 5.68
1142 1788 1.152819 TAGCTCCTATGGCGTCGGT 60.153 57.895 0.00 0.00 34.52 4.69
1161 1807 0.037326 TGTCGAAGGTCATGAGCCAC 60.037 55.000 20.92 13.81 0.00 5.01
1162 1808 0.037326 GTCGAAGGTCATGAGCCACA 60.037 55.000 20.92 0.46 0.00 4.17
1163 1809 0.904649 TCGAAGGTCATGAGCCACAT 59.095 50.000 20.92 5.61 40.17 3.21
1203 1852 2.319136 TTGCCGACTATGCCGTTTAT 57.681 45.000 0.00 0.00 0.00 1.40
1296 1945 2.962253 GACTATGACTGCGCGCCC 60.962 66.667 30.77 18.08 0.00 6.13
1319 1993 0.942410 GCCTGAAGTGCACGTTCGTA 60.942 55.000 12.01 0.87 0.00 3.43
1323 2001 1.202440 TGAAGTGCACGTTCGTACCTT 60.202 47.619 12.01 0.00 0.00 3.50
1324 2002 2.034432 TGAAGTGCACGTTCGTACCTTA 59.966 45.455 12.01 0.00 0.00 2.69
1359 2040 3.944250 CTGGAACCTGCCCGCCAAT 62.944 63.158 0.00 0.00 0.00 3.16
1365 2046 1.598130 CCTGCCCGCCAATAGCTAC 60.598 63.158 0.00 0.00 40.39 3.58
1366 2047 1.447643 CTGCCCGCCAATAGCTACT 59.552 57.895 0.00 0.00 40.39 2.57
1367 2048 0.601311 CTGCCCGCCAATAGCTACTC 60.601 60.000 0.00 0.00 40.39 2.59
1368 2049 1.301795 GCCCGCCAATAGCTACTCC 60.302 63.158 0.00 0.00 40.39 3.85
1369 2050 1.759459 GCCCGCCAATAGCTACTCCT 61.759 60.000 0.00 0.00 40.39 3.69
1370 2051 1.629043 CCCGCCAATAGCTACTCCTA 58.371 55.000 0.00 0.00 40.39 2.94
1371 2052 1.546476 CCCGCCAATAGCTACTCCTAG 59.454 57.143 0.00 0.00 40.39 3.02
1372 2053 2.240279 CCGCCAATAGCTACTCCTAGT 58.760 52.381 0.00 0.00 40.39 2.57
1373 2054 3.418995 CCGCCAATAGCTACTCCTAGTA 58.581 50.000 0.00 0.00 40.39 1.82
1377 2058 6.321690 CCGCCAATAGCTACTCCTAGTATATT 59.678 42.308 0.00 0.00 40.39 1.28
1403 2084 2.806856 CGAACTGATCGCTGCTGCC 61.807 63.158 10.24 0.00 45.89 4.85
1412 2093 4.228097 GCTGCTGCCGTGTATGCG 62.228 66.667 3.85 0.00 0.00 4.73
1416 2097 1.024046 TGCTGCCGTGTATGCGAATT 61.024 50.000 0.00 0.00 0.00 2.17
1421 2102 1.136611 GCCGTGTATGCGAATTCGATC 60.137 52.381 31.01 14.73 43.02 3.69
1451 2132 5.204673 CGTAGGTACGTTACGTATATCCC 57.795 47.826 20.52 16.00 44.12 3.85
1452 2133 4.092968 CGTAGGTACGTTACGTATATCCCC 59.907 50.000 20.52 15.66 44.12 4.81
1453 2134 4.098914 AGGTACGTTACGTATATCCCCA 57.901 45.455 20.52 0.00 44.12 4.96
1454 2135 3.821033 AGGTACGTTACGTATATCCCCAC 59.179 47.826 20.52 7.69 44.12 4.61
1455 2136 3.821033 GGTACGTTACGTATATCCCCACT 59.179 47.826 20.52 0.00 44.12 4.00
1472 2174 4.772624 CCCCACTAGCTAGTATATGAAGCA 59.227 45.833 25.63 0.00 38.75 3.91
1498 2329 1.066454 AGGTGTGCTTTTTGTAACCGC 59.934 47.619 0.00 0.00 32.83 5.68
1527 2358 3.060473 GCTAGTTCGTGCCGCTTAATTAG 60.060 47.826 0.00 0.00 0.00 1.73
1557 2388 3.141398 GTGCTGCTGGCTAAATATGCTA 58.859 45.455 0.00 0.00 42.39 3.49
1561 2392 6.003326 TGCTGCTGGCTAAATATGCTAAATA 58.997 36.000 0.00 0.00 42.39 1.40
1565 2396 9.388506 CTGCTGGCTAAATATGCTAAATATAGT 57.611 33.333 0.00 0.00 0.00 2.12
1587 2422 0.530744 TGCCTAGTTGCCTACTCGTG 59.469 55.000 0.00 0.00 38.33 4.35
1588 2423 0.531200 GCCTAGTTGCCTACTCGTGT 59.469 55.000 0.00 0.00 38.33 4.49
1589 2424 1.747355 GCCTAGTTGCCTACTCGTGTA 59.253 52.381 0.00 0.00 38.33 2.90
1590 2425 2.223525 GCCTAGTTGCCTACTCGTGTAG 60.224 54.545 16.00 16.00 44.23 2.74
1619 2454 4.936891 CTGAAAGTAGGCTTGTGCTTTTT 58.063 39.130 0.00 0.00 39.59 1.94
1625 2460 3.831715 AGGCTTGTGCTTTTTATCGAC 57.168 42.857 0.00 0.00 39.59 4.20
1626 2461 3.412386 AGGCTTGTGCTTTTTATCGACT 58.588 40.909 0.00 0.00 39.59 4.18
1627 2462 4.575885 AGGCTTGTGCTTTTTATCGACTA 58.424 39.130 0.00 0.00 39.59 2.59
1628 2463 4.631813 AGGCTTGTGCTTTTTATCGACTAG 59.368 41.667 0.00 0.00 39.59 2.57
1691 2771 5.406175 TCACTACCTTATTGTTTGTGTACGC 59.594 40.000 0.00 0.00 0.00 4.42
1692 2772 5.177881 CACTACCTTATTGTTTGTGTACGCA 59.822 40.000 4.65 4.65 0.00 5.24
1704 2784 1.017387 TGTACGCATGTGTTGTTGCA 58.983 45.000 18.51 6.70 38.80 4.08
1724 2805 0.109412 GCTGTGCCAAACTGCTGATC 60.109 55.000 0.00 0.00 46.96 2.92
1726 2807 0.178995 TGTGCCAAACTGCTGATCCA 60.179 50.000 0.00 0.00 0.00 3.41
1727 2808 0.524862 GTGCCAAACTGCTGATCCAG 59.475 55.000 0.00 0.00 38.78 3.86
1728 2809 0.401356 TGCCAAACTGCTGATCCAGA 59.599 50.000 6.04 0.00 36.67 3.86
1731 2812 2.615912 GCCAAACTGCTGATCCAGATAC 59.384 50.000 6.04 0.00 36.67 2.24
1734 2819 4.885907 CCAAACTGCTGATCCAGATACATT 59.114 41.667 6.04 0.00 36.67 2.71
1735 2820 5.359009 CCAAACTGCTGATCCAGATACATTT 59.641 40.000 6.04 0.00 36.67 2.32
1736 2821 6.263344 CAAACTGCTGATCCAGATACATTTG 58.737 40.000 6.04 2.98 36.67 2.32
1737 2822 5.108187 ACTGCTGATCCAGATACATTTGT 57.892 39.130 6.04 0.00 36.67 2.83
1738 2823 6.239217 ACTGCTGATCCAGATACATTTGTA 57.761 37.500 6.04 0.00 36.67 2.41
1739 2824 6.835174 ACTGCTGATCCAGATACATTTGTAT 58.165 36.000 2.91 2.91 43.38 2.29
1760 2845 8.621532 TGTATCTGACAAATCTAAAACAAGCT 57.378 30.769 0.00 0.00 34.15 3.74
1761 2846 9.066892 TGTATCTGACAAATCTAAAACAAGCTT 57.933 29.630 0.00 0.00 34.15 3.74
1762 2847 9.899226 GTATCTGACAAATCTAAAACAAGCTTT 57.101 29.630 0.00 0.00 0.00 3.51
1763 2848 8.807667 ATCTGACAAATCTAAAACAAGCTTTG 57.192 30.769 0.00 0.00 38.15 2.77
1764 2849 7.202526 TCTGACAAATCTAAAACAAGCTTTGG 58.797 34.615 0.00 0.00 37.06 3.28
1765 2850 6.279882 TGACAAATCTAAAACAAGCTTTGGG 58.720 36.000 0.00 0.00 37.06 4.12
1766 2851 6.097554 TGACAAATCTAAAACAAGCTTTGGGA 59.902 34.615 0.00 0.00 37.06 4.37
1767 2852 6.280643 ACAAATCTAAAACAAGCTTTGGGAC 58.719 36.000 0.00 0.00 37.06 4.46
1768 2853 4.766404 ATCTAAAACAAGCTTTGGGACG 57.234 40.909 0.00 0.00 34.12 4.79
1769 2854 2.882137 TCTAAAACAAGCTTTGGGACGG 59.118 45.455 0.00 0.00 34.12 4.79
1770 2855 1.770294 AAAACAAGCTTTGGGACGGA 58.230 45.000 0.00 0.00 34.12 4.69
1771 2856 1.318576 AAACAAGCTTTGGGACGGAG 58.681 50.000 0.00 0.00 34.12 4.63
1772 2857 0.537371 AACAAGCTTTGGGACGGAGG 60.537 55.000 0.00 0.00 34.12 4.30
1773 2858 1.675641 CAAGCTTTGGGACGGAGGG 60.676 63.158 0.00 0.00 0.00 4.30
1774 2859 2.907179 AAGCTTTGGGACGGAGGGG 61.907 63.158 0.00 0.00 0.00 4.79
1775 2860 4.426313 GCTTTGGGACGGAGGGGG 62.426 72.222 0.00 0.00 0.00 5.40
1776 2861 2.933834 CTTTGGGACGGAGGGGGT 60.934 66.667 0.00 0.00 0.00 4.95
1777 2862 1.614226 CTTTGGGACGGAGGGGGTA 60.614 63.158 0.00 0.00 0.00 3.69
1778 2863 1.907222 CTTTGGGACGGAGGGGGTAC 61.907 65.000 0.00 0.00 0.00 3.34
1779 2864 2.692909 TTTGGGACGGAGGGGGTACA 62.693 60.000 0.00 0.00 0.00 2.90
1780 2865 3.079478 GGGACGGAGGGGGTACAC 61.079 72.222 0.00 0.00 0.00 2.90
1781 2866 2.284112 GGACGGAGGGGGTACACA 60.284 66.667 0.00 0.00 0.00 3.72
1782 2867 1.914764 GGACGGAGGGGGTACACAA 60.915 63.158 0.00 0.00 0.00 3.33
1783 2868 1.269703 GGACGGAGGGGGTACACAAT 61.270 60.000 0.00 0.00 0.00 2.71
1784 2869 0.616891 GACGGAGGGGGTACACAATT 59.383 55.000 0.00 0.00 0.00 2.32
1785 2870 0.616891 ACGGAGGGGGTACACAATTC 59.383 55.000 0.00 0.00 0.00 2.17
1793 2878 5.567430 AGGGGGTACACAATTCTAAACTTC 58.433 41.667 0.00 0.00 0.00 3.01
1800 2885 7.603024 GGTACACAATTCTAAACTTCTAGTGCT 59.397 37.037 0.00 0.00 0.00 4.40
1811 2896 3.506455 ACTTCTAGTGCTTCGCTTCACTA 59.494 43.478 9.14 9.14 42.81 2.74
1812 2897 4.158764 ACTTCTAGTGCTTCGCTTCACTAT 59.841 41.667 9.69 0.00 42.71 2.12
1895 3058 9.736023 GATTTTTCTTGAAGCAGAACTCTTTTA 57.264 29.630 0.00 0.00 32.28 1.52
1897 3060 9.520204 TTTTTCTTGAAGCAGAACTCTTTTATG 57.480 29.630 0.00 0.00 32.28 1.90
2001 3189 8.792830 TGTTCTATTATTCAACTTGCTAGCTT 57.207 30.769 17.23 0.00 0.00 3.74
2146 3368 1.436600 GCATATGCTCCACTCCATCG 58.563 55.000 20.64 0.00 38.21 3.84
2155 3377 5.510430 TGCTCCACTCCATCGTATATATCT 58.490 41.667 0.00 0.00 0.00 1.98
2168 3414 5.296035 TCGTATATATCTACATCTGCCCACG 59.704 44.000 0.00 0.00 0.00 4.94
2187 3433 1.331756 CGTTCATACTTCTGCATGCCC 59.668 52.381 16.68 0.00 0.00 5.36
2200 3446 1.064060 GCATGCCCAACACTTCGATAC 59.936 52.381 6.36 0.00 0.00 2.24
2215 3461 3.919216 TCGATACGTAGCTCCTAGGTAC 58.081 50.000 9.08 3.27 43.63 3.34
2221 3467 4.814147 ACGTAGCTCCTAGGTACAAAAAC 58.186 43.478 9.08 0.00 46.45 2.43
2266 3513 5.731599 GGCAACTCAGAGACATATTCTTG 57.268 43.478 3.79 0.00 33.22 3.02
2267 3514 5.181748 GGCAACTCAGAGACATATTCTTGT 58.818 41.667 3.79 0.00 33.22 3.16
2268 3515 5.645497 GGCAACTCAGAGACATATTCTTGTT 59.355 40.000 3.79 0.00 33.22 2.83
2269 3516 6.150140 GGCAACTCAGAGACATATTCTTGTTT 59.850 38.462 3.79 0.00 33.22 2.83
2270 3517 7.239972 GCAACTCAGAGACATATTCTTGTTTC 58.760 38.462 3.79 0.00 33.22 2.78
2271 3518 7.095060 GCAACTCAGAGACATATTCTTGTTTCA 60.095 37.037 3.79 0.00 34.17 2.69
2272 3519 8.777413 CAACTCAGAGACATATTCTTGTTTCAA 58.223 33.333 3.79 0.00 34.17 2.69
2273 3520 9.512588 AACTCAGAGACATATTCTTGTTTCAAT 57.487 29.630 3.79 0.00 34.17 2.57
2274 3521 9.512588 ACTCAGAGACATATTCTTGTTTCAATT 57.487 29.630 3.79 0.00 34.17 2.32
2305 3552 4.810191 TTTTGTGGGTGCTTGTTTTAGT 57.190 36.364 0.00 0.00 0.00 2.24
2307 3554 5.916661 TTTGTGGGTGCTTGTTTTAGTTA 57.083 34.783 0.00 0.00 0.00 2.24
2314 3561 9.315525 GTGGGTGCTTGTTTTAGTTATTTTTAA 57.684 29.630 0.00 0.00 0.00 1.52
2315 3562 9.886132 TGGGTGCTTGTTTTAGTTATTTTTAAA 57.114 25.926 0.00 0.00 0.00 1.52
2333 3580 9.830975 ATTTTTAAATGTTTTTACAGGCAGACT 57.169 25.926 0.00 0.00 0.00 3.24
2334 3581 9.660180 TTTTTAAATGTTTTTACAGGCAGACTT 57.340 25.926 0.00 0.00 0.00 3.01
2372 3620 0.955428 ACAGCCGCGTTGATCATTGT 60.955 50.000 13.87 0.08 0.00 2.71
2383 3631 7.071414 CGCGTTGATCATTGTATATGTTCATT 58.929 34.615 0.00 0.00 30.63 2.57
2384 3632 7.587392 CGCGTTGATCATTGTATATGTTCATTT 59.413 33.333 0.00 0.00 30.63 2.32
2385 3633 8.684655 GCGTTGATCATTGTATATGTTCATTTG 58.315 33.333 0.00 0.00 30.63 2.32
2386 3634 8.684655 CGTTGATCATTGTATATGTTCATTTGC 58.315 33.333 0.00 0.00 30.63 3.68
2387 3635 9.518906 GTTGATCATTGTATATGTTCATTTGCA 57.481 29.630 0.00 0.00 30.63 4.08
2464 3712 0.967662 CACATGCAACATTGGGTGGA 59.032 50.000 0.00 0.00 0.00 4.02
2521 3792 5.690865 ACACCGGGATGATGTATGTATTTT 58.309 37.500 6.32 0.00 0.00 1.82
2572 3843 2.730550 ATAAAGCAACAGCACCAAGC 57.269 45.000 0.00 0.00 46.19 4.01
2582 3853 3.502237 GCACCAAGCATCCAACAAG 57.498 52.632 0.00 0.00 44.79 3.16
2583 3854 0.675633 GCACCAAGCATCCAACAAGT 59.324 50.000 0.00 0.00 44.79 3.16
2584 3855 1.336240 GCACCAAGCATCCAACAAGTC 60.336 52.381 0.00 0.00 44.79 3.01
2585 3856 1.955778 CACCAAGCATCCAACAAGTCA 59.044 47.619 0.00 0.00 0.00 3.41
2586 3857 2.361757 CACCAAGCATCCAACAAGTCAA 59.638 45.455 0.00 0.00 0.00 3.18
2587 3858 2.624838 ACCAAGCATCCAACAAGTCAAG 59.375 45.455 0.00 0.00 0.00 3.02
2588 3859 2.886523 CCAAGCATCCAACAAGTCAAGA 59.113 45.455 0.00 0.00 0.00 3.02
2589 3860 3.508793 CCAAGCATCCAACAAGTCAAGAT 59.491 43.478 0.00 0.00 0.00 2.40
2590 3861 4.380233 CCAAGCATCCAACAAGTCAAGATC 60.380 45.833 0.00 0.00 0.00 2.75
2591 3862 4.025040 AGCATCCAACAAGTCAAGATCA 57.975 40.909 0.00 0.00 0.00 2.92
2592 3863 4.008330 AGCATCCAACAAGTCAAGATCAG 58.992 43.478 0.00 0.00 0.00 2.90
2593 3864 3.755378 GCATCCAACAAGTCAAGATCAGT 59.245 43.478 0.00 0.00 0.00 3.41
2594 3865 4.217118 GCATCCAACAAGTCAAGATCAGTT 59.783 41.667 0.00 0.00 0.00 3.16
2595 3866 5.618640 GCATCCAACAAGTCAAGATCAGTTC 60.619 44.000 0.00 0.00 0.00 3.01
2596 3867 5.034852 TCCAACAAGTCAAGATCAGTTCA 57.965 39.130 0.00 0.00 0.00 3.18
2597 3868 5.436175 TCCAACAAGTCAAGATCAGTTCAA 58.564 37.500 0.00 0.00 0.00 2.69
2598 3869 5.528690 TCCAACAAGTCAAGATCAGTTCAAG 59.471 40.000 0.00 0.00 0.00 3.02
2599 3870 5.297776 CCAACAAGTCAAGATCAGTTCAAGT 59.702 40.000 0.00 0.00 0.00 3.16
2600 3871 6.483307 CCAACAAGTCAAGATCAGTTCAAGTA 59.517 38.462 0.00 0.00 0.00 2.24
2601 3872 7.348201 CAACAAGTCAAGATCAGTTCAAGTAC 58.652 38.462 0.00 0.00 0.00 2.73
2602 3873 6.582636 ACAAGTCAAGATCAGTTCAAGTACA 58.417 36.000 0.00 0.00 0.00 2.90
2603 3874 6.703607 ACAAGTCAAGATCAGTTCAAGTACAG 59.296 38.462 0.00 0.00 0.00 2.74
2604 3875 5.788450 AGTCAAGATCAGTTCAAGTACAGG 58.212 41.667 0.00 0.00 0.00 4.00
2605 3876 4.390297 GTCAAGATCAGTTCAAGTACAGGC 59.610 45.833 0.00 0.00 0.00 4.85
2606 3877 4.040339 TCAAGATCAGTTCAAGTACAGGCA 59.960 41.667 0.00 0.00 0.00 4.75
2607 3878 4.833478 AGATCAGTTCAAGTACAGGCAT 57.167 40.909 0.00 0.00 0.00 4.40
2608 3879 4.511527 AGATCAGTTCAAGTACAGGCATG 58.488 43.478 0.00 0.00 0.00 4.06
2609 3880 3.769739 TCAGTTCAAGTACAGGCATGT 57.230 42.857 9.77 9.77 43.76 3.21
2610 3881 3.664107 TCAGTTCAAGTACAGGCATGTC 58.336 45.455 7.56 0.00 41.01 3.06
2611 3882 3.324846 TCAGTTCAAGTACAGGCATGTCT 59.675 43.478 7.56 2.14 41.01 3.41
2612 3883 3.681897 CAGTTCAAGTACAGGCATGTCTC 59.318 47.826 7.56 2.58 41.01 3.36
2613 3884 3.324846 AGTTCAAGTACAGGCATGTCTCA 59.675 43.478 7.56 0.00 41.01 3.27
2614 3885 3.319137 TCAAGTACAGGCATGTCTCAC 57.681 47.619 7.56 0.00 41.01 3.51
2615 3886 2.632512 TCAAGTACAGGCATGTCTCACA 59.367 45.455 7.56 0.00 41.01 3.58
2616 3887 3.261643 TCAAGTACAGGCATGTCTCACAT 59.738 43.478 7.56 0.00 39.91 3.21
2617 3888 4.466015 TCAAGTACAGGCATGTCTCACATA 59.534 41.667 7.56 0.00 36.53 2.29
2618 3889 4.662468 AGTACAGGCATGTCTCACATAG 57.338 45.455 7.56 0.00 36.53 2.23
2619 3890 4.026744 AGTACAGGCATGTCTCACATAGT 58.973 43.478 7.56 0.00 36.53 2.12
2620 3891 3.533606 ACAGGCATGTCTCACATAGTC 57.466 47.619 0.00 0.00 36.53 2.59
2621 3892 2.159184 ACAGGCATGTCTCACATAGTCG 60.159 50.000 0.00 0.00 36.53 4.18
2622 3893 1.202463 AGGCATGTCTCACATAGTCGC 60.202 52.381 0.00 0.00 36.53 5.19
2623 3894 1.202463 GGCATGTCTCACATAGTCGCT 60.202 52.381 0.00 0.00 36.53 4.93
2624 3895 1.857217 GCATGTCTCACATAGTCGCTG 59.143 52.381 0.00 0.00 36.53 5.18
2625 3896 2.467838 CATGTCTCACATAGTCGCTGG 58.532 52.381 0.00 0.00 36.53 4.85
2626 3897 0.817654 TGTCTCACATAGTCGCTGGG 59.182 55.000 0.00 0.00 0.00 4.45
2627 3898 0.103208 GTCTCACATAGTCGCTGGGG 59.897 60.000 0.00 0.00 0.00 4.96
2628 3899 1.043116 TCTCACATAGTCGCTGGGGG 61.043 60.000 0.00 0.00 0.00 5.40
2629 3900 1.305802 TCACATAGTCGCTGGGGGT 60.306 57.895 0.00 0.00 0.00 4.95
2630 3901 0.032912 TCACATAGTCGCTGGGGGTA 60.033 55.000 0.00 0.00 0.00 3.69
2631 3902 0.389391 CACATAGTCGCTGGGGGTAG 59.611 60.000 0.00 0.00 0.00 3.18
2632 3903 0.260816 ACATAGTCGCTGGGGGTAGA 59.739 55.000 0.00 0.00 0.00 2.59
2633 3904 0.962489 CATAGTCGCTGGGGGTAGAG 59.038 60.000 0.00 0.00 0.00 2.43
2634 3905 0.828343 ATAGTCGCTGGGGGTAGAGC 60.828 60.000 0.00 0.00 0.00 4.09
2635 3906 2.219449 TAGTCGCTGGGGGTAGAGCA 62.219 60.000 0.00 0.00 34.69 4.26
2636 3907 2.284331 TCGCTGGGGGTAGAGCAA 60.284 61.111 0.00 0.00 34.69 3.91
2637 3908 1.916273 TCGCTGGGGGTAGAGCAAA 60.916 57.895 0.00 0.00 34.69 3.68
2638 3909 1.002624 CGCTGGGGGTAGAGCAAAA 60.003 57.895 0.00 0.00 34.69 2.44
2639 3910 1.305930 CGCTGGGGGTAGAGCAAAAC 61.306 60.000 0.00 0.00 34.69 2.43
2640 3911 0.251165 GCTGGGGGTAGAGCAAAACA 60.251 55.000 0.00 0.00 35.15 2.83
2641 3912 1.821666 GCTGGGGGTAGAGCAAAACAA 60.822 52.381 0.00 0.00 35.15 2.83
2642 3913 2.162681 CTGGGGGTAGAGCAAAACAAG 58.837 52.381 0.00 0.00 0.00 3.16
2643 3914 0.888619 GGGGGTAGAGCAAAACAAGC 59.111 55.000 0.00 0.00 0.00 4.01
2644 3915 0.888619 GGGGTAGAGCAAAACAAGCC 59.111 55.000 0.00 0.00 0.00 4.35
2645 3916 0.888619 GGGTAGAGCAAAACAAGCCC 59.111 55.000 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.610554 GGTACTGAAGCCTACCGCCA 61.611 60.000 0.00 0.00 38.78 5.69
1 2 1.143401 GGTACTGAAGCCTACCGCC 59.857 63.158 0.00 0.00 38.78 6.13
2 3 1.143401 GGGTACTGAAGCCTACCGC 59.857 63.158 0.00 0.00 42.89 5.68
8 9 1.143401 GCGGTAGGGTACTGAAGCC 59.857 63.158 0.00 0.00 46.88 4.35
9 10 1.143401 GGCGGTAGGGTACTGAAGC 59.857 63.158 0.00 0.00 37.22 3.86
10 11 0.460311 CTGGCGGTAGGGTACTGAAG 59.540 60.000 0.00 0.00 37.22 3.02
11 12 1.610554 GCTGGCGGTAGGGTACTGAA 61.611 60.000 0.00 0.00 37.22 3.02
13 14 2.499685 GCTGGCGGTAGGGTACTG 59.500 66.667 0.00 0.00 38.10 2.74
15 16 4.886121 GCGCTGGCGGTAGGGTAC 62.886 72.222 16.61 0.00 40.19 3.34
31 32 4.564110 GGGTCTACCGCCATGGGC 62.564 72.222 15.13 4.92 46.75 5.36
32 33 1.921869 AAAGGGTCTACCGCCATGGG 61.922 60.000 15.13 3.37 46.96 4.00
33 34 0.034477 AAAAGGGTCTACCGCCATGG 60.034 55.000 7.63 7.63 46.96 3.66
34 35 1.379527 GAAAAGGGTCTACCGCCATG 58.620 55.000 0.00 0.00 46.96 3.66
35 36 0.255033 GGAAAAGGGTCTACCGCCAT 59.745 55.000 0.00 0.00 46.96 4.40
36 37 1.128809 TGGAAAAGGGTCTACCGCCA 61.129 55.000 0.00 0.00 46.96 5.69
37 38 0.675837 GTGGAAAAGGGTCTACCGCC 60.676 60.000 0.00 0.00 46.96 6.13
38 39 1.017701 CGTGGAAAAGGGTCTACCGC 61.018 60.000 0.00 0.00 46.96 5.68
39 40 0.319405 ACGTGGAAAAGGGTCTACCG 59.681 55.000 0.00 0.00 46.96 4.02
40 41 1.345415 TGACGTGGAAAAGGGTCTACC 59.655 52.381 0.00 0.00 40.67 3.18
41 42 2.685100 CTGACGTGGAAAAGGGTCTAC 58.315 52.381 0.00 0.00 0.00 2.59
42 43 1.001633 GCTGACGTGGAAAAGGGTCTA 59.998 52.381 0.00 0.00 0.00 2.59
43 44 0.250338 GCTGACGTGGAAAAGGGTCT 60.250 55.000 0.00 0.00 0.00 3.85
44 45 0.534203 TGCTGACGTGGAAAAGGGTC 60.534 55.000 0.00 0.00 0.00 4.46
45 46 0.818040 GTGCTGACGTGGAAAAGGGT 60.818 55.000 0.00 0.00 0.00 4.34
46 47 1.841663 CGTGCTGACGTGGAAAAGGG 61.842 60.000 0.00 0.00 40.91 3.95
47 48 1.569493 CGTGCTGACGTGGAAAAGG 59.431 57.895 0.00 0.00 40.91 3.11
73 74 3.509137 TTGACGGTGACTGACGGCC 62.509 63.158 0.00 0.00 37.30 6.13
74 75 2.022129 CTTGACGGTGACTGACGGC 61.022 63.158 0.00 0.00 38.94 5.68
75 76 1.372997 CCTTGACGGTGACTGACGG 60.373 63.158 0.00 0.00 0.00 4.79
76 77 1.362717 ACCTTGACGGTGACTGACG 59.637 57.895 0.00 0.00 46.80 4.35
85 86 1.140375 GCGGTAGGTACCTTGACGG 59.860 63.158 22.11 17.68 44.25 4.79
86 87 1.140375 GGCGGTAGGTACCTTGACG 59.860 63.158 22.11 21.58 44.25 4.35
87 88 0.828677 ATGGCGGTAGGTACCTTGAC 59.171 55.000 22.11 13.25 44.25 3.18
88 89 2.313317 CTATGGCGGTAGGTACCTTGA 58.687 52.381 22.11 0.00 44.25 3.02
89 90 1.270147 GCTATGGCGGTAGGTACCTTG 60.270 57.143 22.11 11.77 44.25 3.61
90 91 1.046204 GCTATGGCGGTAGGTACCTT 58.954 55.000 22.11 1.96 44.25 3.50
91 92 0.830866 GGCTATGGCGGTAGGTACCT 60.831 60.000 20.57 20.57 44.25 3.08
92 93 1.670015 GGCTATGGCGGTAGGTACC 59.330 63.158 2.73 2.73 42.98 3.34
93 94 1.117142 TGGGCTATGGCGGTAGGTAC 61.117 60.000 0.00 0.00 39.81 3.34
94 95 0.178915 ATGGGCTATGGCGGTAGGTA 60.179 55.000 0.00 0.00 39.81 3.08
95 96 1.461461 ATGGGCTATGGCGGTAGGT 60.461 57.895 0.00 0.00 39.81 3.08
96 97 1.003355 CATGGGCTATGGCGGTAGG 60.003 63.158 2.42 0.00 39.81 3.18
97 98 4.701663 CATGGGCTATGGCGGTAG 57.298 61.111 2.42 0.00 39.81 3.18
108 109 4.910585 CGTCCTACCGCCATGGGC 62.911 72.222 15.13 4.92 46.75 5.36
109 110 3.467226 ACGTCCTACCGCCATGGG 61.467 66.667 15.13 3.37 44.64 4.00
110 111 2.202878 CACGTCCTACCGCCATGG 60.203 66.667 7.63 7.63 46.41 3.66
111 112 2.890474 GCACGTCCTACCGCCATG 60.890 66.667 0.00 0.00 0.00 3.66
112 113 2.457743 TTTGCACGTCCTACCGCCAT 62.458 55.000 0.00 0.00 0.00 4.40
113 114 3.166490 TTTGCACGTCCTACCGCCA 62.166 57.895 0.00 0.00 0.00 5.69
114 115 2.357760 TTTGCACGTCCTACCGCC 60.358 61.111 0.00 0.00 0.00 6.13
115 116 2.674084 GGTTTGCACGTCCTACCGC 61.674 63.158 0.00 0.00 0.00 5.68
116 117 0.244450 TAGGTTTGCACGTCCTACCG 59.756 55.000 6.63 0.00 34.09 4.02
117 118 1.718396 GTAGGTTTGCACGTCCTACC 58.282 55.000 21.16 6.26 44.43 3.18
119 120 0.244450 CGGTAGGTTTGCACGTCCTA 59.756 55.000 6.63 6.63 33.34 2.94
120 121 1.005394 CGGTAGGTTTGCACGTCCT 60.005 57.895 8.30 8.30 35.60 3.85
121 122 2.674084 GCGGTAGGTTTGCACGTCC 61.674 63.158 0.00 0.00 0.00 4.79
122 123 2.674084 GGCGGTAGGTTTGCACGTC 61.674 63.158 0.00 0.00 0.00 4.34
123 124 2.667199 GGCGGTAGGTTTGCACGT 60.667 61.111 0.00 0.00 0.00 4.49
124 125 3.784412 CGGCGGTAGGTTTGCACG 61.784 66.667 0.00 0.00 0.00 5.34
125 126 4.097863 GCGGCGGTAGGTTTGCAC 62.098 66.667 9.78 0.00 0.00 4.57
128 129 2.437716 ATGGCGGCGGTAGGTTTG 60.438 61.111 9.78 0.00 0.00 2.93
129 130 2.124860 GATGGCGGCGGTAGGTTT 60.125 61.111 9.78 0.00 0.00 3.27
130 131 4.171103 GGATGGCGGCGGTAGGTT 62.171 66.667 9.78 0.00 0.00 3.50
133 134 4.609018 CAGGGATGGCGGCGGTAG 62.609 72.222 9.78 0.00 0.00 3.18
142 143 4.256180 GCCTACCGCCAGGGATGG 62.256 72.222 3.06 0.00 43.47 3.51
143 144 2.550699 TTTGCCTACCGCCAGGGATG 62.551 60.000 3.06 0.00 43.47 3.51
144 145 1.858739 TTTTGCCTACCGCCAGGGAT 61.859 55.000 3.06 0.00 43.47 3.85
145 146 2.478335 CTTTTGCCTACCGCCAGGGA 62.478 60.000 3.06 0.00 43.47 4.20
146 147 2.034999 TTTTGCCTACCGCCAGGG 59.965 61.111 3.06 0.00 43.47 4.45
147 148 2.046285 CCTTTTGCCTACCGCCAGG 61.046 63.158 0.00 0.00 45.13 4.45
148 149 2.046285 CCCTTTTGCCTACCGCCAG 61.046 63.158 0.00 0.00 36.24 4.85
149 150 2.034999 CCCTTTTGCCTACCGCCA 59.965 61.111 0.00 0.00 36.24 5.69
150 151 2.044555 GTCCCTTTTGCCTACCGCC 61.045 63.158 0.00 0.00 36.24 6.13
151 152 1.302993 TGTCCCTTTTGCCTACCGC 60.303 57.895 0.00 0.00 38.31 5.68
152 153 0.323629 TCTGTCCCTTTTGCCTACCG 59.676 55.000 0.00 0.00 0.00 4.02
153 154 2.644676 GATCTGTCCCTTTTGCCTACC 58.355 52.381 0.00 0.00 0.00 3.18
154 155 2.644676 GGATCTGTCCCTTTTGCCTAC 58.355 52.381 0.00 0.00 38.69 3.18
156 157 3.987594 GGATCTGTCCCTTTTGCCT 57.012 52.632 0.00 0.00 38.69 4.75
181 182 4.106341 AGGATCTGACCCCTCTTTGAAAAA 59.894 41.667 0.00 0.00 0.00 1.94
182 183 3.657727 AGGATCTGACCCCTCTTTGAAAA 59.342 43.478 0.00 0.00 0.00 2.29
183 184 3.009473 CAGGATCTGACCCCTCTTTGAAA 59.991 47.826 0.00 0.00 32.44 2.69
184 185 2.573462 CAGGATCTGACCCCTCTTTGAA 59.427 50.000 0.00 0.00 32.44 2.69
185 186 2.191400 CAGGATCTGACCCCTCTTTGA 58.809 52.381 0.00 0.00 32.44 2.69
186 187 2.191400 TCAGGATCTGACCCCTCTTTG 58.809 52.381 0.00 0.00 35.39 2.77
187 188 2.649742 TCAGGATCTGACCCCTCTTT 57.350 50.000 0.00 0.00 35.39 2.52
188 189 2.649742 TTCAGGATCTGACCCCTCTT 57.350 50.000 0.00 0.00 40.46 2.85
189 190 2.776536 CAATTCAGGATCTGACCCCTCT 59.223 50.000 0.00 0.00 40.46 3.69
190 191 2.158696 CCAATTCAGGATCTGACCCCTC 60.159 54.545 0.00 0.00 40.46 4.30
191 192 1.849039 CCAATTCAGGATCTGACCCCT 59.151 52.381 0.00 0.00 40.46 4.79
192 193 1.566231 ACCAATTCAGGATCTGACCCC 59.434 52.381 0.00 0.00 40.46 4.95
193 194 3.372440 AACCAATTCAGGATCTGACCC 57.628 47.619 0.00 0.00 40.46 4.46
194 195 3.879892 GCTAACCAATTCAGGATCTGACC 59.120 47.826 0.00 0.00 40.46 4.02
195 196 4.517285 TGCTAACCAATTCAGGATCTGAC 58.483 43.478 0.00 0.00 40.46 3.51
196 197 4.842531 TGCTAACCAATTCAGGATCTGA 57.157 40.909 0.00 0.00 38.87 3.27
197 198 5.902613 TTTGCTAACCAATTCAGGATCTG 57.097 39.130 0.00 0.00 32.49 2.90
198 199 6.071165 CCTTTTTGCTAACCAATTCAGGATCT 60.071 38.462 0.00 0.00 32.49 2.75
199 200 6.101997 CCTTTTTGCTAACCAATTCAGGATC 58.898 40.000 0.00 0.00 32.49 3.36
200 201 5.046376 CCCTTTTTGCTAACCAATTCAGGAT 60.046 40.000 0.00 0.00 32.49 3.24
201 202 4.283212 CCCTTTTTGCTAACCAATTCAGGA 59.717 41.667 0.00 0.00 32.49 3.86
202 203 4.040339 ACCCTTTTTGCTAACCAATTCAGG 59.960 41.667 0.00 0.00 32.49 3.86
203 204 5.213891 ACCCTTTTTGCTAACCAATTCAG 57.786 39.130 0.00 0.00 32.49 3.02
204 205 4.651503 TGACCCTTTTTGCTAACCAATTCA 59.348 37.500 0.00 0.00 32.49 2.57
205 206 5.208463 TGACCCTTTTTGCTAACCAATTC 57.792 39.130 0.00 0.00 32.49 2.17
206 207 5.622346 TTGACCCTTTTTGCTAACCAATT 57.378 34.783 0.00 0.00 32.49 2.32
207 208 5.622346 TTTGACCCTTTTTGCTAACCAAT 57.378 34.783 0.00 0.00 32.49 3.16
208 209 5.179533 GTTTTGACCCTTTTTGCTAACCAA 58.820 37.500 0.00 0.00 0.00 3.67
209 210 4.223032 TGTTTTGACCCTTTTTGCTAACCA 59.777 37.500 0.00 0.00 0.00 3.67
210 211 4.760878 TGTTTTGACCCTTTTTGCTAACC 58.239 39.130 0.00 0.00 0.00 2.85
211 212 6.045955 TCATGTTTTGACCCTTTTTGCTAAC 58.954 36.000 0.00 0.00 0.00 2.34
212 213 6.227298 TCATGTTTTGACCCTTTTTGCTAA 57.773 33.333 0.00 0.00 0.00 3.09
213 214 5.860941 TCATGTTTTGACCCTTTTTGCTA 57.139 34.783 0.00 0.00 0.00 3.49
214 215 4.751767 TCATGTTTTGACCCTTTTTGCT 57.248 36.364 0.00 0.00 0.00 3.91
215 216 5.809719 TTTCATGTTTTGACCCTTTTTGC 57.190 34.783 0.00 0.00 32.84 3.68
216 217 9.074443 CAAAATTTCATGTTTTGACCCTTTTTG 57.926 29.630 12.38 0.00 45.02 2.44
217 218 7.758980 GCAAAATTTCATGTTTTGACCCTTTTT 59.241 29.630 18.93 1.12 45.02 1.94
218 219 7.257003 GCAAAATTTCATGTTTTGACCCTTTT 58.743 30.769 18.93 2.09 45.02 2.27
219 220 6.183360 GGCAAAATTTCATGTTTTGACCCTTT 60.183 34.615 18.93 0.00 44.81 3.11
220 221 5.299028 GGCAAAATTTCATGTTTTGACCCTT 59.701 36.000 18.93 0.00 44.81 3.95
221 222 4.821260 GGCAAAATTTCATGTTTTGACCCT 59.179 37.500 18.93 0.00 44.81 4.34
222 223 5.107109 GGCAAAATTTCATGTTTTGACCC 57.893 39.130 18.93 10.62 44.81 4.46
225 226 6.238676 CCATGTGGCAAAATTTCATGTTTTGA 60.239 34.615 18.93 3.90 45.02 2.69
226 227 5.915758 CCATGTGGCAAAATTTCATGTTTTG 59.084 36.000 13.09 13.09 45.01 2.44
227 228 5.593502 ACCATGTGGCAAAATTTCATGTTTT 59.406 32.000 12.98 0.00 39.32 2.43
228 229 5.131784 ACCATGTGGCAAAATTTCATGTTT 58.868 33.333 12.98 1.45 39.32 2.83
229 230 4.716794 ACCATGTGGCAAAATTTCATGTT 58.283 34.783 12.98 0.36 39.32 2.71
230 231 4.354893 ACCATGTGGCAAAATTTCATGT 57.645 36.364 12.98 2.91 39.32 3.21
231 232 4.998672 AGAACCATGTGGCAAAATTTCATG 59.001 37.500 8.95 8.95 39.32 3.07
232 233 5.231702 AGAACCATGTGGCAAAATTTCAT 57.768 34.783 0.00 0.00 39.32 2.57
233 234 4.686191 AGAACCATGTGGCAAAATTTCA 57.314 36.364 0.00 0.00 39.32 2.69
234 235 5.299949 AGAAGAACCATGTGGCAAAATTTC 58.700 37.500 0.00 0.00 39.32 2.17
235 236 5.294734 AGAAGAACCATGTGGCAAAATTT 57.705 34.783 0.00 0.00 39.32 1.82
236 237 4.961438 AGAAGAACCATGTGGCAAAATT 57.039 36.364 0.00 0.00 39.32 1.82
237 238 4.961438 AAGAAGAACCATGTGGCAAAAT 57.039 36.364 0.00 0.00 39.32 1.82
238 239 5.860941 TTAAGAAGAACCATGTGGCAAAA 57.139 34.783 0.00 0.00 39.32 2.44
239 240 5.860941 TTTAAGAAGAACCATGTGGCAAA 57.139 34.783 0.00 0.00 39.32 3.68
240 241 5.860941 TTTTAAGAAGAACCATGTGGCAA 57.139 34.783 0.00 0.00 39.32 4.52
241 242 5.860941 TTTTTAAGAAGAACCATGTGGCA 57.139 34.783 0.00 0.00 39.32 4.92
270 271 7.202526 CACACATGTCTGACCAGTTAATTTTT 58.797 34.615 5.17 0.00 0.00 1.94
271 272 6.735694 GCACACATGTCTGACCAGTTAATTTT 60.736 38.462 5.17 0.00 0.00 1.82
272 273 5.278463 GCACACATGTCTGACCAGTTAATTT 60.278 40.000 5.17 0.00 0.00 1.82
273 274 4.216257 GCACACATGTCTGACCAGTTAATT 59.784 41.667 5.17 0.00 0.00 1.40
274 275 3.753272 GCACACATGTCTGACCAGTTAAT 59.247 43.478 5.17 0.00 0.00 1.40
275 276 3.138304 GCACACATGTCTGACCAGTTAA 58.862 45.455 5.17 0.00 0.00 2.01
276 277 2.766313 GCACACATGTCTGACCAGTTA 58.234 47.619 5.17 0.00 0.00 2.24
277 278 1.597742 GCACACATGTCTGACCAGTT 58.402 50.000 5.17 0.00 0.00 3.16
278 279 0.601046 CGCACACATGTCTGACCAGT 60.601 55.000 5.17 0.83 0.00 4.00
279 280 1.293963 CCGCACACATGTCTGACCAG 61.294 60.000 5.17 0.17 0.00 4.00
280 281 1.301637 CCGCACACATGTCTGACCA 60.302 57.895 5.17 0.00 0.00 4.02
281 282 0.391661 ATCCGCACACATGTCTGACC 60.392 55.000 5.17 0.00 0.00 4.02
282 283 0.723414 CATCCGCACACATGTCTGAC 59.277 55.000 5.17 0.00 0.00 3.51
375 394 1.450669 GCCGGAAGATTGCCCGTTA 60.451 57.895 5.05 0.00 43.93 3.18
406 426 5.412594 GCTGATTATTAATGCTGGAATCGGA 59.587 40.000 16.07 0.00 35.71 4.55
545 596 0.874390 GTTTGCGTCTGCTTCATCCA 59.126 50.000 0.00 0.00 43.34 3.41
578 638 3.482472 GTGCCGATATATATTCTGTCGCG 59.518 47.826 0.00 0.00 0.00 5.87
596 660 2.923020 CACTTTATTGCAATTCGGTGCC 59.077 45.455 18.75 0.00 44.26 5.01
626 690 0.308068 CCGTCGACGCAGATCAGTAT 59.692 55.000 31.73 0.00 38.18 2.12
840 1430 4.994471 CCGCACACTCAGCAGCCA 62.994 66.667 0.00 0.00 0.00 4.75
959 1550 3.431207 CGGTGTGGGTTTTATAGGACGAT 60.431 47.826 0.00 0.00 0.00 3.73
1047 1674 1.569548 AGGTAGCTAGCTGGTACTGGA 59.430 52.381 27.68 0.85 45.86 3.86
1115 1752 2.547642 GCCATAGGAGCTAGCTTGAGTG 60.548 54.545 20.42 15.04 0.00 3.51
1138 1784 0.526211 CTCATGACCTTCGACACCGA 59.474 55.000 0.00 0.00 43.96 4.69
1142 1788 0.037326 GTGGCTCATGACCTTCGACA 60.037 55.000 13.32 0.26 0.00 4.35
1161 1807 1.406219 CGCTGTCTTGGACGACGATG 61.406 60.000 0.00 0.00 36.20 3.84
1162 1808 1.154016 CGCTGTCTTGGACGACGAT 60.154 57.895 0.00 0.00 36.20 3.73
1163 1809 2.254350 CGCTGTCTTGGACGACGA 59.746 61.111 0.00 0.00 36.20 4.20
1319 1993 2.104253 CGTTTGCCGGCGATAAGGT 61.104 57.895 23.90 0.00 0.00 3.50
1323 2001 0.179094 AGATTCGTTTGCCGGCGATA 60.179 50.000 23.90 6.81 36.97 2.92
1324 2002 1.449601 AGATTCGTTTGCCGGCGAT 60.450 52.632 23.90 3.69 36.97 4.58
1403 2084 3.042887 TGAGATCGAATTCGCATACACG 58.957 45.455 22.90 0.00 39.60 4.49
1412 2093 5.819059 ACCTACGTACTTGAGATCGAATTC 58.181 41.667 0.00 0.00 0.00 2.17
1416 2097 3.798878 CGTACCTACGTACTTGAGATCGA 59.201 47.826 0.00 0.00 42.38 3.59
1440 2121 5.768980 ACTAGCTAGTGGGGATATACGTA 57.231 43.478 25.52 0.00 34.72 3.57
1441 2122 4.654389 ACTAGCTAGTGGGGATATACGT 57.346 45.455 25.52 0.00 34.72 3.57
1442 2123 8.155510 TCATATACTAGCTAGTGGGGATATACG 58.844 40.741 32.21 15.52 37.10 3.06
1443 2124 9.863650 TTCATATACTAGCTAGTGGGGATATAC 57.136 37.037 32.21 0.00 37.10 1.47
1445 2126 7.507616 GCTTCATATACTAGCTAGTGGGGATAT 59.492 40.741 32.21 23.30 37.10 1.63
1446 2127 6.834451 GCTTCATATACTAGCTAGTGGGGATA 59.166 42.308 32.21 22.28 37.10 2.59
1447 2128 5.659079 GCTTCATATACTAGCTAGTGGGGAT 59.341 44.000 32.21 20.99 37.10 3.85
1448 2129 5.017490 GCTTCATATACTAGCTAGTGGGGA 58.983 45.833 32.21 21.21 37.10 4.81
1449 2130 4.772624 TGCTTCATATACTAGCTAGTGGGG 59.227 45.833 32.21 19.56 37.10 4.96
1450 2131 5.243954 TGTGCTTCATATACTAGCTAGTGGG 59.756 44.000 32.21 19.26 37.10 4.61
1451 2132 6.015856 ACTGTGCTTCATATACTAGCTAGTGG 60.016 42.308 32.21 19.56 37.10 4.00
1452 2133 6.860539 CACTGTGCTTCATATACTAGCTAGTG 59.139 42.308 32.21 17.82 40.58 2.74
1453 2134 6.773200 TCACTGTGCTTCATATACTAGCTAGT 59.227 38.462 28.50 28.50 40.24 2.57
1454 2135 7.208225 TCACTGTGCTTCATATACTAGCTAG 57.792 40.000 19.44 19.44 35.93 3.42
1455 2136 6.207614 CCTCACTGTGCTTCATATACTAGCTA 59.792 42.308 2.12 0.00 35.93 3.32
1472 2174 2.446435 ACAAAAAGCACACCTCACTGT 58.554 42.857 0.00 0.00 0.00 3.55
1498 2329 1.546834 GGCACGAACTAGCTACTTCG 58.453 55.000 24.83 24.83 43.93 3.79
1587 2422 7.916450 CACAAGCCTACTTTCAGTATCTACTAC 59.084 40.741 0.00 0.00 31.94 2.73
1588 2423 7.416438 GCACAAGCCTACTTTCAGTATCTACTA 60.416 40.741 0.00 0.00 31.94 1.82
1589 2424 6.628398 GCACAAGCCTACTTTCAGTATCTACT 60.628 42.308 0.00 0.00 32.91 2.57
1590 2425 5.520649 GCACAAGCCTACTTTCAGTATCTAC 59.479 44.000 0.00 0.00 32.29 2.59
1665 2669 7.276218 GCGTACACAAACAATAAGGTAGTGATA 59.724 37.037 0.00 0.00 33.62 2.15
1678 2682 3.119814 ACAACACATGCGTACACAAACAA 60.120 39.130 0.00 0.00 0.00 2.83
1691 2771 1.483316 CACAGCTGCAACAACACATG 58.517 50.000 15.27 0.00 0.00 3.21
1692 2772 0.249155 GCACAGCTGCAACAACACAT 60.249 50.000 15.27 0.00 43.62 3.21
1713 2793 5.948162 ACAAATGTATCTGGATCAGCAGTTT 59.052 36.000 0.00 0.00 0.00 2.66
1715 2796 5.108187 ACAAATGTATCTGGATCAGCAGT 57.892 39.130 0.00 0.00 0.00 4.40
1734 2819 9.066892 AGCTTGTTTTAGATTTGTCAGATACAA 57.933 29.630 0.00 0.00 46.41 2.41
1735 2820 8.621532 AGCTTGTTTTAGATTTGTCAGATACA 57.378 30.769 0.00 0.00 35.88 2.29
1736 2821 9.899226 AAAGCTTGTTTTAGATTTGTCAGATAC 57.101 29.630 0.00 0.00 32.91 2.24
1737 2822 9.897744 CAAAGCTTGTTTTAGATTTGTCAGATA 57.102 29.630 0.00 0.00 43.16 1.98
1738 2823 7.869429 CCAAAGCTTGTTTTAGATTTGTCAGAT 59.131 33.333 0.00 0.00 45.39 2.90
1739 2824 7.202526 CCAAAGCTTGTTTTAGATTTGTCAGA 58.797 34.615 0.00 0.00 45.39 3.27
1746 2831 4.022329 CCGTCCCAAAGCTTGTTTTAGATT 60.022 41.667 0.00 0.00 0.00 2.40
1747 2832 3.506067 CCGTCCCAAAGCTTGTTTTAGAT 59.494 43.478 0.00 0.00 0.00 1.98
1748 2833 2.882137 CCGTCCCAAAGCTTGTTTTAGA 59.118 45.455 0.00 0.00 0.00 2.10
1749 2834 2.882137 TCCGTCCCAAAGCTTGTTTTAG 59.118 45.455 0.00 0.00 0.00 1.85
1750 2835 2.882137 CTCCGTCCCAAAGCTTGTTTTA 59.118 45.455 0.00 0.00 0.00 1.52
1751 2836 1.681264 CTCCGTCCCAAAGCTTGTTTT 59.319 47.619 0.00 0.00 0.00 2.43
1752 2837 1.318576 CTCCGTCCCAAAGCTTGTTT 58.681 50.000 0.00 0.00 0.00 2.83
1753 2838 0.537371 CCTCCGTCCCAAAGCTTGTT 60.537 55.000 0.00 0.00 0.00 2.83
1754 2839 1.073199 CCTCCGTCCCAAAGCTTGT 59.927 57.895 0.00 0.00 0.00 3.16
1755 2840 1.675641 CCCTCCGTCCCAAAGCTTG 60.676 63.158 0.00 0.00 0.00 4.01
1756 2841 2.757077 CCCTCCGTCCCAAAGCTT 59.243 61.111 0.00 0.00 0.00 3.74
1757 2842 3.330720 CCCCTCCGTCCCAAAGCT 61.331 66.667 0.00 0.00 0.00 3.74
1758 2843 4.426313 CCCCCTCCGTCCCAAAGC 62.426 72.222 0.00 0.00 0.00 3.51
1759 2844 1.614226 TACCCCCTCCGTCCCAAAG 60.614 63.158 0.00 0.00 0.00 2.77
1760 2845 1.919816 GTACCCCCTCCGTCCCAAA 60.920 63.158 0.00 0.00 0.00 3.28
1761 2846 2.284847 GTACCCCCTCCGTCCCAA 60.285 66.667 0.00 0.00 0.00 4.12
1762 2847 3.603080 TGTACCCCCTCCGTCCCA 61.603 66.667 0.00 0.00 0.00 4.37
1763 2848 3.079478 GTGTACCCCCTCCGTCCC 61.079 72.222 0.00 0.00 0.00 4.46
1764 2849 1.269703 ATTGTGTACCCCCTCCGTCC 61.270 60.000 0.00 0.00 0.00 4.79
1765 2850 0.616891 AATTGTGTACCCCCTCCGTC 59.383 55.000 0.00 0.00 0.00 4.79
1766 2851 0.616891 GAATTGTGTACCCCCTCCGT 59.383 55.000 0.00 0.00 0.00 4.69
1767 2852 0.909623 AGAATTGTGTACCCCCTCCG 59.090 55.000 0.00 0.00 0.00 4.63
1768 2853 4.018688 AGTTTAGAATTGTGTACCCCCTCC 60.019 45.833 0.00 0.00 0.00 4.30
1769 2854 5.175388 AGTTTAGAATTGTGTACCCCCTC 57.825 43.478 0.00 0.00 0.00 4.30
1770 2855 5.312443 AGAAGTTTAGAATTGTGTACCCCCT 59.688 40.000 0.00 0.00 0.00 4.79
1771 2856 5.567430 AGAAGTTTAGAATTGTGTACCCCC 58.433 41.667 0.00 0.00 0.00 5.40
1772 2857 7.333672 CACTAGAAGTTTAGAATTGTGTACCCC 59.666 40.741 0.00 0.00 0.00 4.95
1773 2858 7.148457 GCACTAGAAGTTTAGAATTGTGTACCC 60.148 40.741 0.00 0.00 0.00 3.69
1774 2859 7.603024 AGCACTAGAAGTTTAGAATTGTGTACC 59.397 37.037 0.00 0.00 0.00 3.34
1775 2860 8.535690 AGCACTAGAAGTTTAGAATTGTGTAC 57.464 34.615 0.00 0.00 0.00 2.90
1776 2861 9.204570 GAAGCACTAGAAGTTTAGAATTGTGTA 57.795 33.333 0.00 0.00 0.00 2.90
1777 2862 7.095607 CGAAGCACTAGAAGTTTAGAATTGTGT 60.096 37.037 0.00 0.00 0.00 3.72
1778 2863 7.230222 CGAAGCACTAGAAGTTTAGAATTGTG 58.770 38.462 0.00 0.00 0.00 3.33
1779 2864 7.352719 CGAAGCACTAGAAGTTTAGAATTGT 57.647 36.000 0.00 0.00 0.00 2.71
1811 2896 9.312904 TGACTCTTCCCAGATGAAAATTAAAAT 57.687 29.630 0.00 0.00 0.00 1.82
1812 2897 8.704849 TGACTCTTCCCAGATGAAAATTAAAA 57.295 30.769 0.00 0.00 0.00 1.52
1897 3060 8.994429 TCTCTCTGAGATAAGATTTGTGAAAC 57.006 34.615 8.00 0.00 33.35 2.78
1911 3074 2.948979 CGTAACCTGCTCTCTCTGAGAT 59.051 50.000 8.00 0.00 45.39 2.75
2005 3193 4.217550 AGCTAGCAAGTTATTCCGCAAAAA 59.782 37.500 18.83 0.00 0.00 1.94
2007 3195 3.343617 AGCTAGCAAGTTATTCCGCAAA 58.656 40.909 18.83 0.00 0.00 3.68
2008 3196 2.985896 AGCTAGCAAGTTATTCCGCAA 58.014 42.857 18.83 0.00 0.00 4.85
2009 3197 2.691409 AGCTAGCAAGTTATTCCGCA 57.309 45.000 18.83 0.00 0.00 5.69
2146 3368 6.452494 ACGTGGGCAGATGTAGATATATAC 57.548 41.667 0.35 0.35 0.00 1.47
2155 3377 2.764010 AGTATGAACGTGGGCAGATGTA 59.236 45.455 0.00 0.00 0.00 2.29
2168 3414 2.368439 TGGGCATGCAGAAGTATGAAC 58.632 47.619 21.36 0.00 39.88 3.18
2187 3433 3.106672 GGAGCTACGTATCGAAGTGTTG 58.893 50.000 0.00 0.00 0.00 3.33
2200 3446 3.855950 CGTTTTTGTACCTAGGAGCTACG 59.144 47.826 17.98 11.25 0.00 3.51
2283 3530 5.153950 ACTAAAACAAGCACCCACAAAAA 57.846 34.783 0.00 0.00 0.00 1.94
2284 3531 4.810191 ACTAAAACAAGCACCCACAAAA 57.190 36.364 0.00 0.00 0.00 2.44
2285 3532 4.810191 AACTAAAACAAGCACCCACAAA 57.190 36.364 0.00 0.00 0.00 2.83
2286 3533 6.472686 AATAACTAAAACAAGCACCCACAA 57.527 33.333 0.00 0.00 0.00 3.33
2287 3534 6.472686 AAATAACTAAAACAAGCACCCACA 57.527 33.333 0.00 0.00 0.00 4.17
2288 3535 7.780008 AAAAATAACTAAAACAAGCACCCAC 57.220 32.000 0.00 0.00 0.00 4.61
2289 3536 9.886132 TTTAAAAATAACTAAAACAAGCACCCA 57.114 25.926 0.00 0.00 0.00 4.51
2307 3554 9.830975 AGTCTGCCTGTAAAAACATTTAAAAAT 57.169 25.926 0.00 0.00 0.00 1.82
2314 3561 8.409358 AGAATAAGTCTGCCTGTAAAAACATT 57.591 30.769 0.00 0.00 34.29 2.71
2315 3562 8.299570 CAAGAATAAGTCTGCCTGTAAAAACAT 58.700 33.333 0.00 0.00 36.40 2.71
2316 3563 7.284489 ACAAGAATAAGTCTGCCTGTAAAAACA 59.716 33.333 0.00 0.00 36.40 2.83
2317 3564 7.649057 ACAAGAATAAGTCTGCCTGTAAAAAC 58.351 34.615 0.00 0.00 36.40 2.43
2318 3565 7.817418 ACAAGAATAAGTCTGCCTGTAAAAA 57.183 32.000 0.00 0.00 36.40 1.94
2319 3566 7.817418 AACAAGAATAAGTCTGCCTGTAAAA 57.183 32.000 0.00 0.00 36.40 1.52
2322 3569 8.154856 ACTAAAACAAGAATAAGTCTGCCTGTA 58.845 33.333 0.00 0.00 36.40 2.74
2323 3570 6.998673 ACTAAAACAAGAATAAGTCTGCCTGT 59.001 34.615 0.00 0.00 36.40 4.00
2324 3571 7.440523 ACTAAAACAAGAATAAGTCTGCCTG 57.559 36.000 0.00 0.00 36.40 4.85
2325 3572 9.740710 ATAACTAAAACAAGAATAAGTCTGCCT 57.259 29.630 0.00 0.00 36.40 4.75
2334 3581 8.392612 GCGGCTGTAATAACTAAAACAAGAATA 58.607 33.333 0.00 0.00 0.00 1.75
2335 3582 7.248437 GCGGCTGTAATAACTAAAACAAGAAT 58.752 34.615 0.00 0.00 0.00 2.40
2336 3583 6.604930 GCGGCTGTAATAACTAAAACAAGAA 58.395 36.000 0.00 0.00 0.00 2.52
2337 3584 5.163933 CGCGGCTGTAATAACTAAAACAAGA 60.164 40.000 0.00 0.00 0.00 3.02
2338 3585 5.019498 CGCGGCTGTAATAACTAAAACAAG 58.981 41.667 0.00 0.00 0.00 3.16
2354 3601 1.006086 TACAATGATCAACGCGGCTG 58.994 50.000 12.47 7.70 0.00 4.85
2358 3605 5.973158 TGAACATATACAATGATCAACGCG 58.027 37.500 3.53 3.53 29.75 6.01
2394 3642 6.267014 CCTGAGCATATCCAATGATCCTTTTT 59.733 38.462 1.24 0.00 33.87 1.94
2395 3643 5.773680 CCTGAGCATATCCAATGATCCTTTT 59.226 40.000 1.24 0.00 33.87 2.27
2396 3644 5.322754 CCTGAGCATATCCAATGATCCTTT 58.677 41.667 1.24 0.00 33.87 3.11
2397 3645 4.810033 GCCTGAGCATATCCAATGATCCTT 60.810 45.833 1.24 0.00 39.53 3.36
2398 3646 3.308259 GCCTGAGCATATCCAATGATCCT 60.308 47.826 1.24 0.00 39.53 3.24
2399 3647 3.015327 GCCTGAGCATATCCAATGATCC 58.985 50.000 1.24 0.00 39.53 3.36
2400 3648 3.952931 AGCCTGAGCATATCCAATGATC 58.047 45.455 0.00 0.00 43.56 2.92
2401 3649 5.712084 ATAGCCTGAGCATATCCAATGAT 57.288 39.130 0.00 0.00 43.56 2.45
2402 3650 5.509832 AATAGCCTGAGCATATCCAATGA 57.490 39.130 0.00 0.00 43.56 2.57
2403 3651 7.989170 TGTATAATAGCCTGAGCATATCCAATG 59.011 37.037 0.00 0.00 43.56 2.82
2404 3652 8.094284 TGTATAATAGCCTGAGCATATCCAAT 57.906 34.615 0.00 0.00 43.56 3.16
2405 3653 7.400052 TCTGTATAATAGCCTGAGCATATCCAA 59.600 37.037 0.00 0.00 43.56 3.53
2406 3654 6.897413 TCTGTATAATAGCCTGAGCATATCCA 59.103 38.462 0.00 0.00 43.56 3.41
2407 3655 7.353414 TCTGTATAATAGCCTGAGCATATCC 57.647 40.000 0.00 0.00 43.56 2.59
2408 3656 8.637099 TCATCTGTATAATAGCCTGAGCATATC 58.363 37.037 0.00 0.00 43.56 1.63
2409 3657 8.544687 TCATCTGTATAATAGCCTGAGCATAT 57.455 34.615 0.00 0.00 43.56 1.78
2410 3658 7.961326 TCATCTGTATAATAGCCTGAGCATA 57.039 36.000 0.00 0.00 43.56 3.14
2411 3659 6.864151 TCATCTGTATAATAGCCTGAGCAT 57.136 37.500 0.00 0.00 43.56 3.79
2412 3660 6.670695 TTCATCTGTATAATAGCCTGAGCA 57.329 37.500 0.00 0.00 43.56 4.26
2413 3661 7.969536 TTTTCATCTGTATAATAGCCTGAGC 57.030 36.000 0.00 0.00 40.32 4.26
2417 3665 9.155975 CGCTTATTTTCATCTGTATAATAGCCT 57.844 33.333 0.00 0.00 0.00 4.58
2533 3804 9.989869 GCTTTATAATATAAAGCGAGGGAAATC 57.010 33.333 30.20 10.98 46.31 2.17
2546 3817 8.134895 GCTTGGTGCTGTTGCTTTATAATATAA 58.865 33.333 0.00 0.00 40.48 0.98
2547 3818 7.284261 TGCTTGGTGCTGTTGCTTTATAATATA 59.716 33.333 0.00 0.00 43.37 0.86
2548 3819 6.096705 TGCTTGGTGCTGTTGCTTTATAATAT 59.903 34.615 0.00 0.00 43.37 1.28
2549 3820 5.417266 TGCTTGGTGCTGTTGCTTTATAATA 59.583 36.000 0.00 0.00 43.37 0.98
2550 3821 4.220382 TGCTTGGTGCTGTTGCTTTATAAT 59.780 37.500 0.00 0.00 43.37 1.28
2551 3822 3.571828 TGCTTGGTGCTGTTGCTTTATAA 59.428 39.130 0.00 0.00 43.37 0.98
2552 3823 3.153130 TGCTTGGTGCTGTTGCTTTATA 58.847 40.909 0.00 0.00 43.37 0.98
2553 3824 1.962807 TGCTTGGTGCTGTTGCTTTAT 59.037 42.857 0.00 0.00 43.37 1.40
2554 3825 1.397672 TGCTTGGTGCTGTTGCTTTA 58.602 45.000 0.00 0.00 43.37 1.85
2555 3826 0.754472 ATGCTTGGTGCTGTTGCTTT 59.246 45.000 0.00 0.00 43.37 3.51
2556 3827 0.316204 GATGCTTGGTGCTGTTGCTT 59.684 50.000 0.00 0.00 43.37 3.91
2557 3828 1.530013 GGATGCTTGGTGCTGTTGCT 61.530 55.000 0.00 0.00 43.37 3.91
2558 3829 1.080298 GGATGCTTGGTGCTGTTGC 60.080 57.895 0.00 0.00 43.37 4.17
2559 3830 0.675083 TTGGATGCTTGGTGCTGTTG 59.325 50.000 0.00 0.00 43.37 3.33
2560 3831 0.675633 GTTGGATGCTTGGTGCTGTT 59.324 50.000 0.00 0.00 43.37 3.16
2561 3832 0.467844 TGTTGGATGCTTGGTGCTGT 60.468 50.000 0.00 0.00 43.37 4.40
2562 3833 0.675083 TTGTTGGATGCTTGGTGCTG 59.325 50.000 0.00 0.00 43.37 4.41
2563 3834 0.963962 CTTGTTGGATGCTTGGTGCT 59.036 50.000 0.00 0.00 43.37 4.40
2564 3835 0.675633 ACTTGTTGGATGCTTGGTGC 59.324 50.000 0.00 0.00 43.25 5.01
2565 3836 1.955778 TGACTTGTTGGATGCTTGGTG 59.044 47.619 0.00 0.00 0.00 4.17
2566 3837 2.363306 TGACTTGTTGGATGCTTGGT 57.637 45.000 0.00 0.00 0.00 3.67
2567 3838 2.886523 TCTTGACTTGTTGGATGCTTGG 59.113 45.455 0.00 0.00 0.00 3.61
2568 3839 4.216902 TGATCTTGACTTGTTGGATGCTTG 59.783 41.667 0.00 0.00 0.00 4.01
2569 3840 4.401022 TGATCTTGACTTGTTGGATGCTT 58.599 39.130 0.00 0.00 0.00 3.91
2570 3841 4.008330 CTGATCTTGACTTGTTGGATGCT 58.992 43.478 0.00 0.00 0.00 3.79
2571 3842 3.755378 ACTGATCTTGACTTGTTGGATGC 59.245 43.478 0.00 0.00 0.00 3.91
2572 3843 5.471116 TGAACTGATCTTGACTTGTTGGATG 59.529 40.000 0.00 0.00 0.00 3.51
2573 3844 5.624159 TGAACTGATCTTGACTTGTTGGAT 58.376 37.500 0.00 0.00 0.00 3.41
2574 3845 5.034852 TGAACTGATCTTGACTTGTTGGA 57.965 39.130 0.00 0.00 0.00 3.53
2575 3846 5.297776 ACTTGAACTGATCTTGACTTGTTGG 59.702 40.000 0.00 0.00 0.00 3.77
2576 3847 6.369059 ACTTGAACTGATCTTGACTTGTTG 57.631 37.500 0.00 0.00 0.00 3.33
2577 3848 7.047891 TGTACTTGAACTGATCTTGACTTGTT 58.952 34.615 0.00 0.00 0.00 2.83
2578 3849 6.582636 TGTACTTGAACTGATCTTGACTTGT 58.417 36.000 0.00 0.00 0.00 3.16
2579 3850 6.146837 CCTGTACTTGAACTGATCTTGACTTG 59.853 42.308 0.00 0.00 0.00 3.16
2580 3851 6.226787 CCTGTACTTGAACTGATCTTGACTT 58.773 40.000 0.00 0.00 0.00 3.01
2581 3852 5.788450 CCTGTACTTGAACTGATCTTGACT 58.212 41.667 0.00 0.00 0.00 3.41
2582 3853 4.390297 GCCTGTACTTGAACTGATCTTGAC 59.610 45.833 0.00 0.00 0.00 3.18
2583 3854 4.040339 TGCCTGTACTTGAACTGATCTTGA 59.960 41.667 0.00 0.00 0.00 3.02
2584 3855 4.318332 TGCCTGTACTTGAACTGATCTTG 58.682 43.478 0.00 0.00 0.00 3.02
2585 3856 4.623932 TGCCTGTACTTGAACTGATCTT 57.376 40.909 0.00 0.00 0.00 2.40
2586 3857 4.019860 ACATGCCTGTACTTGAACTGATCT 60.020 41.667 0.00 0.00 32.49 2.75
2587 3858 4.256920 ACATGCCTGTACTTGAACTGATC 58.743 43.478 0.00 0.00 32.49 2.92
2588 3859 4.019860 AGACATGCCTGTACTTGAACTGAT 60.020 41.667 0.00 0.00 35.14 2.90
2589 3860 3.324846 AGACATGCCTGTACTTGAACTGA 59.675 43.478 0.00 0.00 35.14 3.41
2590 3861 3.668447 AGACATGCCTGTACTTGAACTG 58.332 45.455 0.00 0.00 35.14 3.16
2591 3862 3.324846 TGAGACATGCCTGTACTTGAACT 59.675 43.478 0.00 0.00 35.14 3.01
2592 3863 3.433615 GTGAGACATGCCTGTACTTGAAC 59.566 47.826 0.00 0.00 35.14 3.18
2593 3864 3.070878 TGTGAGACATGCCTGTACTTGAA 59.929 43.478 0.00 0.00 35.14 2.69
2594 3865 2.632512 TGTGAGACATGCCTGTACTTGA 59.367 45.455 0.00 0.00 35.14 3.02
2595 3866 3.044235 TGTGAGACATGCCTGTACTTG 57.956 47.619 0.00 0.00 35.14 3.16
2596 3867 3.988976 ATGTGAGACATGCCTGTACTT 57.011 42.857 0.00 0.00 37.45 2.24
2597 3868 4.026744 ACTATGTGAGACATGCCTGTACT 58.973 43.478 0.00 0.00 39.53 2.73
2598 3869 4.363999 GACTATGTGAGACATGCCTGTAC 58.636 47.826 0.00 0.00 39.53 2.90
2599 3870 3.066760 CGACTATGTGAGACATGCCTGTA 59.933 47.826 0.00 0.00 39.53 2.74
2600 3871 2.159184 CGACTATGTGAGACATGCCTGT 60.159 50.000 0.00 0.00 39.53 4.00
2601 3872 2.467838 CGACTATGTGAGACATGCCTG 58.532 52.381 0.00 0.00 39.53 4.85
2602 3873 1.202463 GCGACTATGTGAGACATGCCT 60.202 52.381 0.00 0.00 39.53 4.75
2603 3874 1.202463 AGCGACTATGTGAGACATGCC 60.202 52.381 0.00 0.00 39.53 4.40
2604 3875 1.857217 CAGCGACTATGTGAGACATGC 59.143 52.381 0.00 0.00 39.53 4.06
2605 3876 2.467838 CCAGCGACTATGTGAGACATG 58.532 52.381 0.00 0.00 39.53 3.21
2606 3877 1.410517 CCCAGCGACTATGTGAGACAT 59.589 52.381 0.00 0.00 42.35 3.06
2607 3878 0.817654 CCCAGCGACTATGTGAGACA 59.182 55.000 0.00 0.00 0.00 3.41
2608 3879 0.103208 CCCCAGCGACTATGTGAGAC 59.897 60.000 0.00 0.00 0.00 3.36
2609 3880 1.043116 CCCCCAGCGACTATGTGAGA 61.043 60.000 0.00 0.00 0.00 3.27
2610 3881 1.330655 ACCCCCAGCGACTATGTGAG 61.331 60.000 0.00 0.00 0.00 3.51
2611 3882 0.032912 TACCCCCAGCGACTATGTGA 60.033 55.000 0.00 0.00 0.00 3.58
2612 3883 0.389391 CTACCCCCAGCGACTATGTG 59.611 60.000 0.00 0.00 0.00 3.21
2613 3884 0.260816 TCTACCCCCAGCGACTATGT 59.739 55.000 0.00 0.00 0.00 2.29
2614 3885 0.962489 CTCTACCCCCAGCGACTATG 59.038 60.000 0.00 0.00 0.00 2.23
2615 3886 0.828343 GCTCTACCCCCAGCGACTAT 60.828 60.000 0.00 0.00 0.00 2.12
2616 3887 1.455217 GCTCTACCCCCAGCGACTA 60.455 63.158 0.00 0.00 0.00 2.59
2617 3888 2.760385 GCTCTACCCCCAGCGACT 60.760 66.667 0.00 0.00 0.00 4.18
2618 3889 2.180159 TTTGCTCTACCCCCAGCGAC 62.180 60.000 0.00 0.00 38.59 5.19
2619 3890 1.485294 TTTTGCTCTACCCCCAGCGA 61.485 55.000 0.00 0.00 38.59 4.93
2620 3891 1.002624 TTTTGCTCTACCCCCAGCG 60.003 57.895 0.00 0.00 38.59 5.18
2621 3892 0.251165 TGTTTTGCTCTACCCCCAGC 60.251 55.000 0.00 0.00 36.08 4.85
2622 3893 2.162681 CTTGTTTTGCTCTACCCCCAG 58.837 52.381 0.00 0.00 0.00 4.45
2623 3894 1.821666 GCTTGTTTTGCTCTACCCCCA 60.822 52.381 0.00 0.00 0.00 4.96
2624 3895 0.888619 GCTTGTTTTGCTCTACCCCC 59.111 55.000 0.00 0.00 0.00 5.40
2625 3896 0.888619 GGCTTGTTTTGCTCTACCCC 59.111 55.000 0.00 0.00 0.00 4.95
2626 3897 0.888619 GGGCTTGTTTTGCTCTACCC 59.111 55.000 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.