Multiple sequence alignment - TraesCS3D01G064000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G064000 chr3D 100.000 4030 0 0 1 4030 28232144 28236173 0.000000e+00 7443.0
1 TraesCS3D01G064000 chr3D 75.000 1024 207 35 1515 2527 27913095 27914080 1.040000e-115 427.0
2 TraesCS3D01G064000 chr3D 76.286 797 166 17 1753 2534 27560448 27561236 1.740000e-108 403.0
3 TraesCS3D01G064000 chr3D 73.092 1048 225 44 1517 2535 27940420 27939401 1.810000e-83 320.0
4 TraesCS3D01G064000 chr3A 92.828 2900 158 22 1140 4030 38197644 38200502 0.000000e+00 4157.0
5 TraesCS3D01G064000 chr3A 90.669 493 33 9 1 487 38168177 38168662 0.000000e+00 643.0
6 TraesCS3D01G064000 chr3A 97.423 194 5 0 972 1165 38197407 38197600 8.350000e-87 331.0
7 TraesCS3D01G064000 chr3A 73.242 1024 223 36 1517 2510 37832225 37833227 3.880000e-85 326.0
8 TraesCS3D01G064000 chr3A 77.241 145 22 8 2964 3107 11402317 11402451 1.550000e-09 75.0
9 TraesCS3D01G064000 chr3A 95.122 41 2 0 3238 3278 37676131 37676171 9.350000e-07 65.8
10 TraesCS3D01G064000 chr3B 90.534 2060 159 27 1096 3148 47256242 47258272 0.000000e+00 2691.0
11 TraesCS3D01G064000 chr3B 80.326 859 94 29 1 838 47245395 47246199 7.510000e-162 580.0
12 TraesCS3D01G064000 chr3B 86.698 421 36 10 838 1244 47255908 47256322 2.210000e-122 449.0
13 TraesCS3D01G064000 chr3B 77.930 657 131 10 1862 2508 46787938 46787286 8.120000e-107 398.0
14 TraesCS3D01G064000 chr3B 76.140 658 141 15 1862 2508 46592209 46591557 8.350000e-87 331.0
15 TraesCS3D01G064000 chr3B 82.775 209 30 5 2298 2505 46038833 46039036 8.900000e-42 182.0
16 TraesCS3D01G064000 chr3B 86.029 136 12 4 3145 3280 47258307 47258435 5.430000e-29 139.0
17 TraesCS3D01G064000 chr1B 85.185 135 18 2 2972 3105 510792833 510792966 1.950000e-28 137.0
18 TraesCS3D01G064000 chrUn 74.839 310 70 8 1522 1827 34704477 34704782 2.530000e-27 134.0
19 TraesCS3D01G064000 chrUn 74.545 330 68 11 1514 1833 225561396 225561073 3.270000e-26 130.0
20 TraesCS3D01G064000 chrUn 74.691 324 66 11 1514 1827 237462974 237463291 3.270000e-26 130.0
21 TraesCS3D01G064000 chrUn 74.691 324 66 11 1514 1827 257674690 257675007 3.270000e-26 130.0
22 TraesCS3D01G064000 chrUn 74.691 324 66 11 1514 1827 279684831 279685148 3.270000e-26 130.0
23 TraesCS3D01G064000 chrUn 73.556 329 73 9 1514 1833 32290127 32289804 3.290000e-21 113.0
24 TraesCS3D01G064000 chrUn 79.333 150 23 6 1514 1659 236403164 236403019 9.220000e-17 99.0
25 TraesCS3D01G064000 chrUn 100.000 28 0 0 1952 1979 474629564 474629591 7.000000e-03 52.8
26 TraesCS3D01G064000 chr1D 83.099 142 21 3 2965 3105 381006910 381007049 4.230000e-25 126.0
27 TraesCS3D01G064000 chr7B 78.082 146 28 4 1684 1827 744048670 744048813 5.550000e-14 89.8
28 TraesCS3D01G064000 chr7B 100.000 28 0 0 1952 1979 745672449 745672422 7.000000e-03 52.8
29 TraesCS3D01G064000 chr7B 100.000 28 0 0 1952 1979 746423536 746423509 7.000000e-03 52.8
30 TraesCS3D01G064000 chr7B 100.000 28 0 0 1952 1979 747235972 747235999 7.000000e-03 52.8
31 TraesCS3D01G064000 chr7B 100.000 28 0 0 1952 1979 747839153 747839126 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G064000 chr3D 28232144 28236173 4029 False 7443 7443 100.000000 1 4030 1 chr3D.!!$F3 4029
1 TraesCS3D01G064000 chr3D 27913095 27914080 985 False 427 427 75.000000 1515 2527 1 chr3D.!!$F2 1012
2 TraesCS3D01G064000 chr3D 27560448 27561236 788 False 403 403 76.286000 1753 2534 1 chr3D.!!$F1 781
3 TraesCS3D01G064000 chr3D 27939401 27940420 1019 True 320 320 73.092000 1517 2535 1 chr3D.!!$R1 1018
4 TraesCS3D01G064000 chr3A 38197407 38200502 3095 False 2244 4157 95.125500 972 4030 2 chr3A.!!$F5 3058
5 TraesCS3D01G064000 chr3A 37832225 37833227 1002 False 326 326 73.242000 1517 2510 1 chr3A.!!$F3 993
6 TraesCS3D01G064000 chr3B 47255908 47258435 2527 False 1093 2691 87.753667 838 3280 3 chr3B.!!$F3 2442
7 TraesCS3D01G064000 chr3B 47245395 47246199 804 False 580 580 80.326000 1 838 1 chr3B.!!$F2 837
8 TraesCS3D01G064000 chr3B 46787286 46787938 652 True 398 398 77.930000 1862 2508 1 chr3B.!!$R2 646
9 TraesCS3D01G064000 chr3B 46591557 46592209 652 True 331 331 76.140000 1862 2508 1 chr3B.!!$R1 646

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
508 518 0.036022 GGTCAGGCTTGTCAGCTCTT 59.964 55.0 0.0 0.0 46.44 2.85 F
735 745 0.037697 AAGCCGTGTTGATCGCTGTA 60.038 50.0 0.0 0.0 0.00 2.74 F
736 746 0.175760 AGCCGTGTTGATCGCTGTAT 59.824 50.0 0.0 0.0 0.00 2.29 F
899 910 0.251653 GCTGCCATCCATCCATCCAT 60.252 55.0 0.0 0.0 0.00 3.41 F
901 912 0.406750 TGCCATCCATCCATCCATCC 59.593 55.0 0.0 0.0 0.00 3.51 F
2684 3055 0.320073 CTGTTGGCTGTTTGGGCATG 60.320 55.0 0.0 0.0 41.29 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1905 2072 0.955178 CCCATCGAGCGTCTGTAGAT 59.045 55.00 0.00 0.0 0.0 1.98 R
2667 3038 0.965439 TACATGCCCAAACAGCCAAC 59.035 50.00 0.00 0.0 0.0 3.77 R
2668 3039 1.935799 ATACATGCCCAAACAGCCAA 58.064 45.00 0.00 0.0 0.0 4.52 R
2669 3040 1.935799 AATACATGCCCAAACAGCCA 58.064 45.00 0.00 0.0 0.0 4.75 R
2691 3062 4.661222 TCCCACATATCAAGCTGACAAAA 58.339 39.13 0.00 0.0 0.0 2.44 R
3767 4180 0.033796 CCTCATGCAATCCCAGTGGT 60.034 55.00 8.74 0.0 0.0 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.162777 TCCTCTTTTTGTGTTTTGAAACCTG 58.837 36.000 4.32 0.00 38.11 4.00
31 32 4.804108 TGTGTTTTGAAACCTGACAACAG 58.196 39.130 4.32 0.00 43.12 3.16
53 55 5.924254 CAGGCCACATAATTCTTGCATTATG 59.076 40.000 5.01 13.69 46.33 1.90
55 57 5.922544 GGCCACATAATTCTTGCATTATGAC 59.077 40.000 19.66 10.92 44.81 3.06
57 59 6.513230 GCCACATAATTCTTGCATTATGACGA 60.513 38.462 19.66 0.00 44.81 4.20
62 64 9.110617 CATAATTCTTGCATTATGACGACATTC 57.889 33.333 5.55 0.00 44.81 2.67
67 69 7.592938 TCTTGCATTATGACGACATTCTTTTT 58.407 30.769 5.55 0.00 37.87 1.94
68 70 7.750458 TCTTGCATTATGACGACATTCTTTTTC 59.250 33.333 5.55 0.00 37.87 2.29
69 71 6.321717 TGCATTATGACGACATTCTTTTTCC 58.678 36.000 5.55 0.00 37.87 3.13
93 95 7.980742 CCTGATAAAGGGCGTTTTTATTAAC 57.019 36.000 10.73 0.00 43.15 2.01
131 133 5.746307 TCATCAAGCAGATACAAAGCATC 57.254 39.130 0.00 0.00 34.43 3.91
143 145 2.029649 ACAAAGCATCATGAGCAACACC 60.030 45.455 16.20 0.00 0.00 4.16
145 147 1.028330 AGCATCATGAGCAACACCCG 61.028 55.000 16.20 0.00 0.00 5.28
166 168 5.300752 CCGACCTCTGCATTATAACATTCT 58.699 41.667 0.00 0.00 0.00 2.40
167 169 6.455647 CCGACCTCTGCATTATAACATTCTA 58.544 40.000 0.00 0.00 0.00 2.10
169 171 7.441157 CCGACCTCTGCATTATAACATTCTAAA 59.559 37.037 0.00 0.00 0.00 1.85
170 172 8.826710 CGACCTCTGCATTATAACATTCTAAAA 58.173 33.333 0.00 0.00 0.00 1.52
181 183 9.635404 TTATAACATTCTAAAATCCATTCCGGT 57.365 29.630 0.00 0.00 35.57 5.28
182 184 6.850752 AACATTCTAAAATCCATTCCGGTT 57.149 33.333 0.00 0.00 35.57 4.44
183 185 6.850752 ACATTCTAAAATCCATTCCGGTTT 57.149 33.333 0.00 0.00 35.57 3.27
276 278 7.948357 ACTCACTAATTGCATATACGTCCTTA 58.052 34.615 0.00 0.00 0.00 2.69
316 318 6.359480 AGTGAGGTTCTTGTTTAGTTTTCG 57.641 37.500 0.00 0.00 0.00 3.46
319 323 5.875910 TGAGGTTCTTGTTTAGTTTTCGTCA 59.124 36.000 0.00 0.00 0.00 4.35
323 327 8.248253 AGGTTCTTGTTTAGTTTTCGTCATTTT 58.752 29.630 0.00 0.00 0.00 1.82
324 328 8.865978 GGTTCTTGTTTAGTTTTCGTCATTTTT 58.134 29.630 0.00 0.00 0.00 1.94
325 329 9.881414 GTTCTTGTTTAGTTTTCGTCATTTTTC 57.119 29.630 0.00 0.00 0.00 2.29
335 339 9.805966 AGTTTTCGTCATTTTTCTTTTTGAAAC 57.194 25.926 0.00 0.00 43.55 2.78
349 359 8.211116 TCTTTTTGAAACCAATGTAGACGTTA 57.789 30.769 0.00 0.00 0.00 3.18
388 398 7.948357 ACCTTTTACTTTTGAGTACCAAATCC 58.052 34.615 9.41 0.00 43.59 3.01
389 399 7.562088 ACCTTTTACTTTTGAGTACCAAATCCA 59.438 33.333 9.41 0.00 43.59 3.41
390 400 8.082242 CCTTTTACTTTTGAGTACCAAATCCAG 58.918 37.037 9.41 7.48 43.59 3.86
391 401 8.754991 TTTTACTTTTGAGTACCAAATCCAGA 57.245 30.769 9.41 0.00 43.59 3.86
392 402 8.934023 TTTACTTTTGAGTACCAAATCCAGAT 57.066 30.769 9.41 0.00 43.59 2.90
396 406 9.533831 ACTTTTGAGTACCAAATCCAGATAATT 57.466 29.630 9.41 0.00 43.59 1.40
399 409 9.527157 TTTGAGTACCAAATCCAGATAATTTCA 57.473 29.630 5.67 0.00 39.65 2.69
400 410 8.737168 TGAGTACCAAATCCAGATAATTTCAG 57.263 34.615 0.00 0.00 0.00 3.02
401 411 7.283127 TGAGTACCAAATCCAGATAATTTCAGC 59.717 37.037 0.00 0.00 0.00 4.26
402 412 7.349598 AGTACCAAATCCAGATAATTTCAGCT 58.650 34.615 0.00 0.00 0.00 4.24
403 413 7.836183 AGTACCAAATCCAGATAATTTCAGCTT 59.164 33.333 0.00 0.00 0.00 3.74
404 414 9.120538 GTACCAAATCCAGATAATTTCAGCTTA 57.879 33.333 0.00 0.00 0.00 3.09
405 415 8.000780 ACCAAATCCAGATAATTTCAGCTTAC 57.999 34.615 0.00 0.00 0.00 2.34
406 416 7.068716 ACCAAATCCAGATAATTTCAGCTTACC 59.931 37.037 0.00 0.00 0.00 2.85
407 417 7.068593 CCAAATCCAGATAATTTCAGCTTACCA 59.931 37.037 0.00 0.00 0.00 3.25
408 418 8.469200 CAAATCCAGATAATTTCAGCTTACCAA 58.531 33.333 0.00 0.00 0.00 3.67
409 419 8.593945 AATCCAGATAATTTCAGCTTACCAAA 57.406 30.769 0.00 0.00 0.00 3.28
410 420 7.630242 TCCAGATAATTTCAGCTTACCAAAG 57.370 36.000 0.00 0.00 35.68 2.77
411 421 7.175104 TCCAGATAATTTCAGCTTACCAAAGT 58.825 34.615 0.00 0.00 34.99 2.66
412 422 8.325787 TCCAGATAATTTCAGCTTACCAAAGTA 58.674 33.333 0.00 0.00 34.99 2.24
413 423 8.956426 CCAGATAATTTCAGCTTACCAAAGTAA 58.044 33.333 0.00 0.00 36.97 2.24
414 424 9.774742 CAGATAATTTCAGCTTACCAAAGTAAC 57.225 33.333 0.00 0.00 34.70 2.50
415 425 9.515226 AGATAATTTCAGCTTACCAAAGTAACA 57.485 29.630 0.00 0.00 34.70 2.41
418 428 8.409358 AATTTCAGCTTACCAAAGTAACATCT 57.591 30.769 0.00 0.00 34.70 2.90
419 429 7.435068 TTTCAGCTTACCAAAGTAACATCTC 57.565 36.000 0.00 0.00 34.70 2.75
420 430 6.109156 TCAGCTTACCAAAGTAACATCTCA 57.891 37.500 0.00 0.00 34.70 3.27
421 431 6.530120 TCAGCTTACCAAAGTAACATCTCAA 58.470 36.000 0.00 0.00 34.70 3.02
422 432 6.650807 TCAGCTTACCAAAGTAACATCTCAAG 59.349 38.462 0.00 0.00 34.70 3.02
423 433 6.428159 CAGCTTACCAAAGTAACATCTCAAGT 59.572 38.462 0.00 0.00 34.70 3.16
424 434 6.998673 AGCTTACCAAAGTAACATCTCAAGTT 59.001 34.615 0.00 0.00 34.70 2.66
425 435 8.154856 AGCTTACCAAAGTAACATCTCAAGTTA 58.845 33.333 0.00 0.00 34.70 2.24
426 436 8.443937 GCTTACCAAAGTAACATCTCAAGTTAG 58.556 37.037 0.00 0.00 34.70 2.34
427 437 9.706691 CTTACCAAAGTAACATCTCAAGTTAGA 57.293 33.333 0.00 0.00 34.70 2.10
430 440 9.574516 ACCAAAGTAACATCTCAAGTTAGATTT 57.425 29.630 0.00 0.00 33.87 2.17
444 454 9.847224 TCAAGTTAGATTTTTCTCTTAGGTTGT 57.153 29.630 0.00 0.00 0.00 3.32
445 455 9.884465 CAAGTTAGATTTTTCTCTTAGGTTGTG 57.116 33.333 0.00 0.00 0.00 3.33
446 456 8.100508 AGTTAGATTTTTCTCTTAGGTTGTGC 57.899 34.615 0.00 0.00 0.00 4.57
447 457 7.939588 AGTTAGATTTTTCTCTTAGGTTGTGCT 59.060 33.333 0.00 0.00 0.00 4.40
448 458 8.568794 GTTAGATTTTTCTCTTAGGTTGTGCTT 58.431 33.333 0.00 0.00 0.00 3.91
449 459 7.588497 AGATTTTTCTCTTAGGTTGTGCTTT 57.412 32.000 0.00 0.00 0.00 3.51
450 460 8.011844 AGATTTTTCTCTTAGGTTGTGCTTTT 57.988 30.769 0.00 0.00 0.00 2.27
451 461 8.478066 AGATTTTTCTCTTAGGTTGTGCTTTTT 58.522 29.630 0.00 0.00 0.00 1.94
470 480 4.864704 TTTTTAGATGGTTGGGCTTGTC 57.135 40.909 0.00 0.00 0.00 3.18
471 481 3.806949 TTTAGATGGTTGGGCTTGTCT 57.193 42.857 0.00 0.00 0.00 3.41
472 482 3.350219 TTAGATGGTTGGGCTTGTCTC 57.650 47.619 0.00 0.00 0.00 3.36
473 483 0.329596 AGATGGTTGGGCTTGTCTCC 59.670 55.000 0.00 0.00 0.00 3.71
474 484 0.681243 GATGGTTGGGCTTGTCTCCC 60.681 60.000 0.00 0.00 44.17 4.30
475 485 1.142688 ATGGTTGGGCTTGTCTCCCT 61.143 55.000 0.00 0.00 44.23 4.20
476 486 1.002011 GGTTGGGCTTGTCTCCCTC 60.002 63.158 0.00 0.00 44.23 4.30
477 487 1.761174 GTTGGGCTTGTCTCCCTCA 59.239 57.895 0.00 0.00 44.23 3.86
478 488 0.110486 GTTGGGCTTGTCTCCCTCAA 59.890 55.000 0.00 0.00 44.23 3.02
479 489 0.850100 TTGGGCTTGTCTCCCTCAAA 59.150 50.000 0.00 0.00 44.23 2.69
480 490 0.850100 TGGGCTTGTCTCCCTCAAAA 59.150 50.000 0.00 0.00 44.23 2.44
481 491 1.202927 TGGGCTTGTCTCCCTCAAAAG 60.203 52.381 0.00 0.00 44.23 2.27
482 492 1.073923 GGGCTTGTCTCCCTCAAAAGA 59.926 52.381 0.00 0.00 40.66 2.52
483 493 2.489073 GGGCTTGTCTCCCTCAAAAGAA 60.489 50.000 0.00 0.00 40.66 2.52
484 494 3.222603 GGCTTGTCTCCCTCAAAAGAAA 58.777 45.455 0.00 0.00 0.00 2.52
485 495 3.636764 GGCTTGTCTCCCTCAAAAGAAAA 59.363 43.478 0.00 0.00 0.00 2.29
486 496 4.281941 GGCTTGTCTCCCTCAAAAGAAAAT 59.718 41.667 0.00 0.00 0.00 1.82
487 497 5.476945 GGCTTGTCTCCCTCAAAAGAAAATA 59.523 40.000 0.00 0.00 0.00 1.40
488 498 6.382608 GCTTGTCTCCCTCAAAAGAAAATAC 58.617 40.000 0.00 0.00 0.00 1.89
489 499 6.554334 TTGTCTCCCTCAAAAGAAAATACG 57.446 37.500 0.00 0.00 0.00 3.06
490 500 5.001232 TGTCTCCCTCAAAAGAAAATACGG 58.999 41.667 0.00 0.00 0.00 4.02
491 501 5.001874 GTCTCCCTCAAAAGAAAATACGGT 58.998 41.667 0.00 0.00 0.00 4.83
492 502 5.121925 GTCTCCCTCAAAAGAAAATACGGTC 59.878 44.000 0.00 0.00 0.00 4.79
493 503 4.975631 TCCCTCAAAAGAAAATACGGTCA 58.024 39.130 0.00 0.00 0.00 4.02
494 504 5.001232 TCCCTCAAAAGAAAATACGGTCAG 58.999 41.667 0.00 0.00 0.00 3.51
495 505 4.156008 CCCTCAAAAGAAAATACGGTCAGG 59.844 45.833 0.00 0.00 0.00 3.86
496 506 4.379499 CCTCAAAAGAAAATACGGTCAGGC 60.379 45.833 0.00 0.00 0.00 4.85
497 507 4.394729 TCAAAAGAAAATACGGTCAGGCT 58.605 39.130 0.00 0.00 0.00 4.58
498 508 4.825085 TCAAAAGAAAATACGGTCAGGCTT 59.175 37.500 0.00 0.00 0.00 4.35
499 509 4.766404 AAAGAAAATACGGTCAGGCTTG 57.234 40.909 0.00 0.00 0.00 4.01
500 510 3.418684 AGAAAATACGGTCAGGCTTGT 57.581 42.857 0.00 0.00 0.00 3.16
501 511 3.335579 AGAAAATACGGTCAGGCTTGTC 58.664 45.455 0.00 0.00 0.00 3.18
502 512 2.851263 AAATACGGTCAGGCTTGTCA 57.149 45.000 0.00 0.00 0.00 3.58
503 513 2.386661 AATACGGTCAGGCTTGTCAG 57.613 50.000 0.00 0.00 0.00 3.51
504 514 0.108138 ATACGGTCAGGCTTGTCAGC 60.108 55.000 0.00 0.00 46.52 4.26
505 515 1.185618 TACGGTCAGGCTTGTCAGCT 61.186 55.000 0.00 0.00 46.44 4.24
506 516 1.739562 CGGTCAGGCTTGTCAGCTC 60.740 63.158 0.00 0.00 46.44 4.09
507 517 1.676384 GGTCAGGCTTGTCAGCTCT 59.324 57.895 0.00 0.00 46.44 4.09
508 518 0.036022 GGTCAGGCTTGTCAGCTCTT 59.964 55.000 0.00 0.00 46.44 2.85
509 519 1.437625 GTCAGGCTTGTCAGCTCTTC 58.562 55.000 0.00 0.00 46.44 2.87
510 520 1.001860 GTCAGGCTTGTCAGCTCTTCT 59.998 52.381 0.00 0.00 46.44 2.85
511 521 1.274728 TCAGGCTTGTCAGCTCTTCTC 59.725 52.381 0.00 0.00 46.44 2.87
512 522 1.275856 CAGGCTTGTCAGCTCTTCTCT 59.724 52.381 0.00 0.00 46.44 3.10
513 523 1.977129 AGGCTTGTCAGCTCTTCTCTT 59.023 47.619 0.00 0.00 46.44 2.85
514 524 2.371510 AGGCTTGTCAGCTCTTCTCTTT 59.628 45.455 0.00 0.00 46.44 2.52
515 525 2.741517 GGCTTGTCAGCTCTTCTCTTTC 59.258 50.000 0.00 0.00 46.44 2.62
516 526 2.411409 GCTTGTCAGCTCTTCTCTTTCG 59.589 50.000 0.00 0.00 43.51 3.46
517 527 2.071688 TGTCAGCTCTTCTCTTTCGC 57.928 50.000 0.00 0.00 0.00 4.70
518 528 1.337260 TGTCAGCTCTTCTCTTTCGCC 60.337 52.381 0.00 0.00 0.00 5.54
519 529 0.969149 TCAGCTCTTCTCTTTCGCCA 59.031 50.000 0.00 0.00 0.00 5.69
520 530 1.067283 TCAGCTCTTCTCTTTCGCCAG 60.067 52.381 0.00 0.00 0.00 4.85
521 531 0.248843 AGCTCTTCTCTTTCGCCAGG 59.751 55.000 0.00 0.00 0.00 4.45
522 532 0.247736 GCTCTTCTCTTTCGCCAGGA 59.752 55.000 0.00 0.00 0.00 3.86
523 533 1.738700 GCTCTTCTCTTTCGCCAGGAG 60.739 57.143 0.00 0.00 0.00 3.69
524 534 1.821753 CTCTTCTCTTTCGCCAGGAGA 59.178 52.381 0.00 0.00 34.77 3.71
525 535 2.232452 CTCTTCTCTTTCGCCAGGAGAA 59.768 50.000 0.60 0.60 41.78 2.87
526 536 2.834549 TCTTCTCTTTCGCCAGGAGAAT 59.165 45.455 6.44 0.00 42.65 2.40
527 537 2.969628 TCTCTTTCGCCAGGAGAATC 57.030 50.000 6.44 0.00 33.82 2.52
528 538 2.461695 TCTCTTTCGCCAGGAGAATCT 58.538 47.619 6.44 0.00 33.82 2.40
529 539 2.834549 TCTCTTTCGCCAGGAGAATCTT 59.165 45.455 6.44 0.00 33.82 2.40
530 540 3.261897 TCTCTTTCGCCAGGAGAATCTTT 59.738 43.478 6.44 0.00 33.82 2.52
531 541 3.338249 TCTTTCGCCAGGAGAATCTTTG 58.662 45.455 6.44 0.00 33.73 2.77
532 542 3.007940 TCTTTCGCCAGGAGAATCTTTGA 59.992 43.478 6.44 0.00 33.73 2.69
533 543 3.634397 TTCGCCAGGAGAATCTTTGAT 57.366 42.857 0.60 0.00 33.73 2.57
534 544 3.634397 TCGCCAGGAGAATCTTTGATT 57.366 42.857 0.00 0.00 33.73 2.57
535 545 3.273434 TCGCCAGGAGAATCTTTGATTG 58.727 45.455 0.00 0.00 33.73 2.67
536 546 2.223433 CGCCAGGAGAATCTTTGATTGC 60.223 50.000 0.00 0.00 33.73 3.56
537 547 2.756760 GCCAGGAGAATCTTTGATTGCA 59.243 45.455 0.00 0.00 33.73 4.08
538 548 3.383825 GCCAGGAGAATCTTTGATTGCAT 59.616 43.478 0.00 0.00 33.73 3.96
539 549 4.142004 GCCAGGAGAATCTTTGATTGCATT 60.142 41.667 0.00 0.00 33.73 3.56
540 550 5.626116 GCCAGGAGAATCTTTGATTGCATTT 60.626 40.000 0.00 0.00 33.73 2.32
541 551 6.403878 CCAGGAGAATCTTTGATTGCATTTT 58.596 36.000 0.00 0.00 33.73 1.82
542 552 6.312918 CCAGGAGAATCTTTGATTGCATTTTG 59.687 38.462 0.00 0.00 33.73 2.44
543 553 5.873164 AGGAGAATCTTTGATTGCATTTTGC 59.127 36.000 0.00 0.00 38.69 3.68
544 554 5.064325 GGAGAATCTTTGATTGCATTTTGCC 59.936 40.000 0.00 0.00 37.77 4.52
545 555 5.801380 AGAATCTTTGATTGCATTTTGCCT 58.199 33.333 0.00 0.00 44.23 4.75
546 556 6.235664 AGAATCTTTGATTGCATTTTGCCTT 58.764 32.000 0.00 0.00 44.23 4.35
547 557 6.713450 AGAATCTTTGATTGCATTTTGCCTTT 59.287 30.769 0.00 0.00 44.23 3.11
548 558 7.879160 AGAATCTTTGATTGCATTTTGCCTTTA 59.121 29.630 0.00 0.00 44.23 1.85
549 559 8.570068 AATCTTTGATTGCATTTTGCCTTTAT 57.430 26.923 0.00 0.00 44.23 1.40
550 560 7.982761 TCTTTGATTGCATTTTGCCTTTATT 57.017 28.000 0.00 0.00 44.23 1.40
551 561 7.808672 TCTTTGATTGCATTTTGCCTTTATTG 58.191 30.769 0.00 0.00 44.23 1.90
552 562 7.660617 TCTTTGATTGCATTTTGCCTTTATTGA 59.339 29.630 0.00 0.00 44.23 2.57
553 563 6.724694 TGATTGCATTTTGCCTTTATTGAC 57.275 33.333 0.00 0.00 44.23 3.18
554 564 5.642919 TGATTGCATTTTGCCTTTATTGACC 59.357 36.000 0.00 0.00 44.23 4.02
555 565 4.613925 TGCATTTTGCCTTTATTGACCA 57.386 36.364 0.00 0.00 44.23 4.02
556 566 5.163281 TGCATTTTGCCTTTATTGACCAT 57.837 34.783 0.00 0.00 44.23 3.55
557 567 5.177326 TGCATTTTGCCTTTATTGACCATC 58.823 37.500 0.00 0.00 44.23 3.51
558 568 5.177326 GCATTTTGCCTTTATTGACCATCA 58.823 37.500 0.00 0.00 37.42 3.07
559 569 5.818857 GCATTTTGCCTTTATTGACCATCAT 59.181 36.000 0.00 0.00 37.42 2.45
560 570 6.018507 GCATTTTGCCTTTATTGACCATCATC 60.019 38.462 0.00 0.00 37.42 2.92
561 571 6.602410 TTTTGCCTTTATTGACCATCATCA 57.398 33.333 0.00 0.00 0.00 3.07
562 572 6.602410 TTTGCCTTTATTGACCATCATCAA 57.398 33.333 0.00 0.00 42.62 2.57
563 573 6.602410 TTGCCTTTATTGACCATCATCAAA 57.398 33.333 0.00 0.00 41.78 2.69
564 574 5.964758 TGCCTTTATTGACCATCATCAAAC 58.035 37.500 0.00 0.00 41.78 2.93
565 575 5.479724 TGCCTTTATTGACCATCATCAAACA 59.520 36.000 0.00 0.00 41.78 2.83
566 576 6.154877 TGCCTTTATTGACCATCATCAAACAT 59.845 34.615 0.00 0.00 41.78 2.71
567 577 7.043565 GCCTTTATTGACCATCATCAAACATT 58.956 34.615 0.00 0.00 41.78 2.71
568 578 8.196771 GCCTTTATTGACCATCATCAAACATTA 58.803 33.333 0.00 0.00 41.78 1.90
569 579 9.520204 CCTTTATTGACCATCATCAAACATTAC 57.480 33.333 0.00 0.00 41.78 1.89
570 580 9.225201 CTTTATTGACCATCATCAAACATTACG 57.775 33.333 0.00 0.00 41.78 3.18
571 581 6.757897 ATTGACCATCATCAAACATTACGT 57.242 33.333 0.00 0.00 41.78 3.57
572 582 5.794687 TGACCATCATCAAACATTACGTC 57.205 39.130 0.00 0.00 0.00 4.34
573 583 4.328712 TGACCATCATCAAACATTACGTCG 59.671 41.667 0.00 0.00 0.00 5.12
574 584 3.063452 ACCATCATCAAACATTACGTCGC 59.937 43.478 0.00 0.00 0.00 5.19
575 585 3.063316 CCATCATCAAACATTACGTCGCA 59.937 43.478 0.00 0.00 0.00 5.10
576 586 4.260743 CCATCATCAAACATTACGTCGCAT 60.261 41.667 0.00 0.00 0.00 4.73
577 587 5.050431 CCATCATCAAACATTACGTCGCATA 60.050 40.000 0.00 0.00 0.00 3.14
578 588 6.418141 CATCATCAAACATTACGTCGCATAA 58.582 36.000 0.00 0.00 0.00 1.90
579 589 6.410243 TCATCAAACATTACGTCGCATAAA 57.590 33.333 0.00 0.00 0.00 1.40
580 590 7.010697 TCATCAAACATTACGTCGCATAAAT 57.989 32.000 0.00 0.00 0.00 1.40
581 591 6.904543 TCATCAAACATTACGTCGCATAAATG 59.095 34.615 0.00 0.00 35.83 2.32
582 592 6.410243 TCAAACATTACGTCGCATAAATGA 57.590 33.333 12.22 0.00 34.26 2.57
583 593 6.474364 TCAAACATTACGTCGCATAAATGAG 58.526 36.000 12.22 3.81 34.26 2.90
584 594 6.311690 TCAAACATTACGTCGCATAAATGAGA 59.688 34.615 12.22 5.61 34.26 3.27
585 595 5.890110 ACATTACGTCGCATAAATGAGAG 57.110 39.130 12.22 0.00 37.28 3.20
586 596 4.745125 ACATTACGTCGCATAAATGAGAGG 59.255 41.667 12.22 12.76 44.34 3.69
587 597 4.642445 TTACGTCGCATAAATGAGAGGA 57.358 40.909 18.84 4.69 42.43 3.71
588 598 3.520290 ACGTCGCATAAATGAGAGGAA 57.480 42.857 18.84 0.00 42.43 3.36
589 599 3.448686 ACGTCGCATAAATGAGAGGAAG 58.551 45.455 18.84 5.54 42.43 3.46
590 600 3.130516 ACGTCGCATAAATGAGAGGAAGA 59.869 43.478 18.84 0.00 42.43 2.87
591 601 4.112634 CGTCGCATAAATGAGAGGAAGAA 58.887 43.478 9.82 0.00 42.43 2.52
592 602 4.566759 CGTCGCATAAATGAGAGGAAGAAA 59.433 41.667 9.82 0.00 42.43 2.52
593 603 5.235186 CGTCGCATAAATGAGAGGAAGAAAT 59.765 40.000 9.82 0.00 42.43 2.17
594 604 6.420903 CGTCGCATAAATGAGAGGAAGAAATA 59.579 38.462 9.82 0.00 42.43 1.40
595 605 7.567771 CGTCGCATAAATGAGAGGAAGAAATAC 60.568 40.741 9.82 0.00 42.43 1.89
596 606 7.224753 GTCGCATAAATGAGAGGAAGAAATACA 59.775 37.037 0.00 0.00 37.28 2.29
597 607 7.439356 TCGCATAAATGAGAGGAAGAAATACAG 59.561 37.037 0.00 0.00 32.78 2.74
598 608 7.225538 CGCATAAATGAGAGGAAGAAATACAGT 59.774 37.037 0.00 0.00 0.00 3.55
599 609 8.897752 GCATAAATGAGAGGAAGAAATACAGTT 58.102 33.333 0.00 0.00 0.00 3.16
602 612 8.924511 AAATGAGAGGAAGAAATACAGTTTGA 57.075 30.769 0.00 0.00 0.00 2.69
603 613 9.525826 AAATGAGAGGAAGAAATACAGTTTGAT 57.474 29.630 0.00 0.00 0.00 2.57
604 614 9.525826 AATGAGAGGAAGAAATACAGTTTGATT 57.474 29.630 0.00 0.00 0.00 2.57
605 615 8.924511 TGAGAGGAAGAAATACAGTTTGATTT 57.075 30.769 0.00 0.00 0.00 2.17
606 616 9.354673 TGAGAGGAAGAAATACAGTTTGATTTT 57.645 29.630 0.00 0.00 0.00 1.82
607 617 9.833182 GAGAGGAAGAAATACAGTTTGATTTTC 57.167 33.333 0.00 0.00 0.00 2.29
608 618 9.579932 AGAGGAAGAAATACAGTTTGATTTTCT 57.420 29.630 0.00 0.00 35.40 2.52
611 621 9.965824 GGAAGAAATACAGTTTGATTTTCTTCA 57.034 29.630 27.51 0.00 46.04 3.02
614 624 9.956720 AGAAATACAGTTTGATTTTCTTCACAG 57.043 29.630 0.00 0.00 32.54 3.66
615 625 9.736023 GAAATACAGTTTGATTTTCTTCACAGT 57.264 29.630 0.00 0.00 0.00 3.55
619 629 8.281212 ACAGTTTGATTTTCTTCACAGTTAGT 57.719 30.769 0.00 0.00 0.00 2.24
634 644 7.499321 CACAGTTAGTGTTGGGTATAAACAA 57.501 36.000 0.00 0.00 43.40 2.83
635 645 7.932335 CACAGTTAGTGTTGGGTATAAACAAA 58.068 34.615 0.00 0.00 43.40 2.83
636 646 8.407064 CACAGTTAGTGTTGGGTATAAACAAAA 58.593 33.333 0.00 0.00 43.40 2.44
637 647 9.138596 ACAGTTAGTGTTGGGTATAAACAAAAT 57.861 29.630 0.00 0.00 39.14 1.82
638 648 9.620660 CAGTTAGTGTTGGGTATAAACAAAATC 57.379 33.333 0.00 0.00 39.14 2.17
639 649 8.508875 AGTTAGTGTTGGGTATAAACAAAATCG 58.491 33.333 0.00 0.00 39.14 3.34
640 650 8.505625 GTTAGTGTTGGGTATAAACAAAATCGA 58.494 33.333 0.00 0.00 39.14 3.59
641 651 7.513371 AGTGTTGGGTATAAACAAAATCGAA 57.487 32.000 0.00 0.00 39.14 3.71
642 652 7.364970 AGTGTTGGGTATAAACAAAATCGAAC 58.635 34.615 0.00 0.00 39.14 3.95
643 653 6.583427 GTGTTGGGTATAAACAAAATCGAACC 59.417 38.462 0.00 0.00 39.14 3.62
644 654 6.264744 TGTTGGGTATAAACAAAATCGAACCA 59.735 34.615 0.00 0.00 34.68 3.67
645 655 6.503589 TGGGTATAAACAAAATCGAACCAG 57.496 37.500 0.00 0.00 0.00 4.00
646 656 6.005198 TGGGTATAAACAAAATCGAACCAGT 58.995 36.000 0.00 0.00 0.00 4.00
647 657 6.072397 TGGGTATAAACAAAATCGAACCAGTG 60.072 38.462 0.00 0.00 0.00 3.66
648 658 5.798434 GGTATAAACAAAATCGAACCAGTGC 59.202 40.000 0.00 0.00 0.00 4.40
649 659 5.705609 ATAAACAAAATCGAACCAGTGCT 57.294 34.783 0.00 0.00 0.00 4.40
650 660 6.811253 ATAAACAAAATCGAACCAGTGCTA 57.189 33.333 0.00 0.00 0.00 3.49
651 661 5.705609 AAACAAAATCGAACCAGTGCTAT 57.294 34.783 0.00 0.00 0.00 2.97
652 662 6.811253 AAACAAAATCGAACCAGTGCTATA 57.189 33.333 0.00 0.00 0.00 1.31
653 663 6.811253 AACAAAATCGAACCAGTGCTATAA 57.189 33.333 0.00 0.00 0.00 0.98
654 664 6.811253 ACAAAATCGAACCAGTGCTATAAA 57.189 33.333 0.00 0.00 0.00 1.40
655 665 7.391148 ACAAAATCGAACCAGTGCTATAAAT 57.609 32.000 0.00 0.00 0.00 1.40
656 666 8.500753 ACAAAATCGAACCAGTGCTATAAATA 57.499 30.769 0.00 0.00 0.00 1.40
657 667 8.952278 ACAAAATCGAACCAGTGCTATAAATAA 58.048 29.630 0.00 0.00 0.00 1.40
658 668 9.221775 CAAAATCGAACCAGTGCTATAAATAAC 57.778 33.333 0.00 0.00 0.00 1.89
659 669 8.500753 AAATCGAACCAGTGCTATAAATAACA 57.499 30.769 0.00 0.00 0.00 2.41
660 670 8.500753 AATCGAACCAGTGCTATAAATAACAA 57.499 30.769 0.00 0.00 0.00 2.83
661 671 7.908827 TCGAACCAGTGCTATAAATAACAAA 57.091 32.000 0.00 0.00 0.00 2.83
662 672 8.500753 TCGAACCAGTGCTATAAATAACAAAT 57.499 30.769 0.00 0.00 0.00 2.32
663 673 8.394877 TCGAACCAGTGCTATAAATAACAAATG 58.605 33.333 0.00 0.00 0.00 2.32
664 674 8.394877 CGAACCAGTGCTATAAATAACAAATGA 58.605 33.333 0.00 0.00 0.00 2.57
665 675 9.503427 GAACCAGTGCTATAAATAACAAATGAC 57.497 33.333 0.00 0.00 0.00 3.06
666 676 8.574251 ACCAGTGCTATAAATAACAAATGACA 57.426 30.769 0.00 0.00 0.00 3.58
667 677 9.189156 ACCAGTGCTATAAATAACAAATGACAT 57.811 29.630 0.00 0.00 0.00 3.06
668 678 9.669353 CCAGTGCTATAAATAACAAATGACATC 57.331 33.333 0.00 0.00 0.00 3.06
669 679 9.669353 CAGTGCTATAAATAACAAATGACATCC 57.331 33.333 0.00 0.00 0.00 3.51
670 680 9.632638 AGTGCTATAAATAACAAATGACATCCT 57.367 29.630 0.00 0.00 0.00 3.24
723 733 6.861065 AGAAATAATATGTACCAAGCCGTG 57.139 37.500 0.00 0.00 0.00 4.94
724 734 6.354130 AGAAATAATATGTACCAAGCCGTGT 58.646 36.000 0.00 0.00 0.00 4.49
725 735 6.826741 AGAAATAATATGTACCAAGCCGTGTT 59.173 34.615 0.00 0.00 0.00 3.32
726 736 6.371809 AATAATATGTACCAAGCCGTGTTG 57.628 37.500 0.00 0.00 0.00 3.33
727 737 3.620427 ATATGTACCAAGCCGTGTTGA 57.380 42.857 0.00 0.00 0.00 3.18
728 738 2.489938 ATGTACCAAGCCGTGTTGAT 57.510 45.000 0.00 0.00 0.00 2.57
729 739 1.803334 TGTACCAAGCCGTGTTGATC 58.197 50.000 0.00 0.00 0.00 2.92
730 740 0.719465 GTACCAAGCCGTGTTGATCG 59.281 55.000 0.00 0.00 0.00 3.69
731 741 1.017177 TACCAAGCCGTGTTGATCGC 61.017 55.000 0.00 0.00 0.00 4.58
732 742 2.034879 CCAAGCCGTGTTGATCGCT 61.035 57.895 0.00 0.00 0.00 4.93
733 743 1.133253 CAAGCCGTGTTGATCGCTG 59.867 57.895 0.00 0.00 0.00 5.18
734 744 1.301716 AAGCCGTGTTGATCGCTGT 60.302 52.632 0.00 0.00 0.00 4.40
735 745 0.037697 AAGCCGTGTTGATCGCTGTA 60.038 50.000 0.00 0.00 0.00 2.74
736 746 0.175760 AGCCGTGTTGATCGCTGTAT 59.824 50.000 0.00 0.00 0.00 2.29
737 747 1.407618 AGCCGTGTTGATCGCTGTATA 59.592 47.619 0.00 0.00 0.00 1.47
738 748 1.787155 GCCGTGTTGATCGCTGTATAG 59.213 52.381 0.00 0.00 0.00 1.31
739 749 2.543031 GCCGTGTTGATCGCTGTATAGA 60.543 50.000 0.00 0.00 0.00 1.98
740 750 3.702330 CCGTGTTGATCGCTGTATAGAA 58.298 45.455 0.00 0.00 0.00 2.10
741 751 4.109766 CCGTGTTGATCGCTGTATAGAAA 58.890 43.478 0.00 0.00 0.00 2.52
742 752 4.565166 CCGTGTTGATCGCTGTATAGAAAA 59.435 41.667 0.00 0.00 0.00 2.29
743 753 5.062934 CCGTGTTGATCGCTGTATAGAAAAA 59.937 40.000 0.00 0.00 0.00 1.94
744 754 5.952064 CGTGTTGATCGCTGTATAGAAAAAC 59.048 40.000 0.00 0.00 0.00 2.43
745 755 6.248631 GTGTTGATCGCTGTATAGAAAAACC 58.751 40.000 0.00 0.00 0.00 3.27
746 756 5.062934 TGTTGATCGCTGTATAGAAAAACCG 59.937 40.000 0.00 0.00 0.00 4.44
747 757 5.001237 TGATCGCTGTATAGAAAAACCGA 57.999 39.130 0.00 0.00 0.00 4.69
748 758 5.597806 TGATCGCTGTATAGAAAAACCGAT 58.402 37.500 0.00 0.00 36.96 4.18
749 759 6.741109 TGATCGCTGTATAGAAAAACCGATA 58.259 36.000 0.00 0.00 34.75 2.92
750 760 7.375834 TGATCGCTGTATAGAAAAACCGATAT 58.624 34.615 0.00 0.00 34.75 1.63
751 761 7.328493 TGATCGCTGTATAGAAAAACCGATATG 59.672 37.037 0.00 0.00 34.75 1.78
752 762 6.509656 TCGCTGTATAGAAAAACCGATATGT 58.490 36.000 0.00 0.00 0.00 2.29
753 763 6.639686 TCGCTGTATAGAAAAACCGATATGTC 59.360 38.462 0.00 0.00 0.00 3.06
755 765 6.420008 GCTGTATAGAAAAACCGATATGTCGT 59.580 38.462 11.09 0.00 46.25 4.34
756 766 7.567048 GCTGTATAGAAAAACCGATATGTCGTG 60.567 40.741 11.09 5.12 46.25 4.35
757 767 6.698329 TGTATAGAAAAACCGATATGTCGTGG 59.302 38.462 11.09 0.00 46.25 4.94
758 768 3.934068 AGAAAAACCGATATGTCGTGGT 58.066 40.909 11.09 0.00 46.25 4.16
759 769 5.075858 AGAAAAACCGATATGTCGTGGTA 57.924 39.130 11.09 0.00 46.25 3.25
760 770 5.481105 AGAAAAACCGATATGTCGTGGTAA 58.519 37.500 11.09 0.00 46.25 2.85
761 771 6.110707 AGAAAAACCGATATGTCGTGGTAAT 58.889 36.000 11.09 0.00 46.25 1.89
762 772 7.267128 AGAAAAACCGATATGTCGTGGTAATA 58.733 34.615 11.09 0.00 46.25 0.98
763 773 7.437267 AGAAAAACCGATATGTCGTGGTAATAG 59.563 37.037 11.09 0.00 46.25 1.73
764 774 5.779529 AACCGATATGTCGTGGTAATAGT 57.220 39.130 11.09 0.00 46.25 2.12
765 775 5.779529 ACCGATATGTCGTGGTAATAGTT 57.220 39.130 11.09 0.00 46.25 2.24
766 776 5.526115 ACCGATATGTCGTGGTAATAGTTG 58.474 41.667 11.09 0.00 46.25 3.16
767 777 4.921515 CCGATATGTCGTGGTAATAGTTGG 59.078 45.833 11.09 0.00 46.25 3.77
768 778 5.508489 CCGATATGTCGTGGTAATAGTTGGT 60.508 44.000 11.09 0.00 46.25 3.67
769 779 5.981315 CGATATGTCGTGGTAATAGTTGGTT 59.019 40.000 3.37 0.00 42.78 3.67
770 780 6.477688 CGATATGTCGTGGTAATAGTTGGTTT 59.522 38.462 3.37 0.00 42.78 3.27
771 781 5.873179 ATGTCGTGGTAATAGTTGGTTTG 57.127 39.130 0.00 0.00 0.00 2.93
772 782 4.066490 TGTCGTGGTAATAGTTGGTTTGG 58.934 43.478 0.00 0.00 0.00 3.28
773 783 3.075884 TCGTGGTAATAGTTGGTTTGGC 58.924 45.455 0.00 0.00 0.00 4.52
774 784 2.814919 CGTGGTAATAGTTGGTTTGGCA 59.185 45.455 0.00 0.00 0.00 4.92
775 785 3.119990 CGTGGTAATAGTTGGTTTGGCAG 60.120 47.826 0.00 0.00 0.00 4.85
776 786 3.824443 GTGGTAATAGTTGGTTTGGCAGT 59.176 43.478 0.00 0.00 0.00 4.40
777 787 3.823873 TGGTAATAGTTGGTTTGGCAGTG 59.176 43.478 0.00 0.00 0.00 3.66
778 788 4.076394 GGTAATAGTTGGTTTGGCAGTGA 58.924 43.478 0.00 0.00 0.00 3.41
779 789 4.521256 GGTAATAGTTGGTTTGGCAGTGAA 59.479 41.667 0.00 0.00 0.00 3.18
780 790 5.185056 GGTAATAGTTGGTTTGGCAGTGAAT 59.815 40.000 0.00 0.00 0.00 2.57
781 791 5.391312 AATAGTTGGTTTGGCAGTGAATC 57.609 39.130 0.00 0.00 0.00 2.52
782 792 2.665165 AGTTGGTTTGGCAGTGAATCA 58.335 42.857 0.00 0.00 0.00 2.57
783 793 2.362077 AGTTGGTTTGGCAGTGAATCAC 59.638 45.455 5.02 5.02 34.10 3.06
784 794 2.064434 TGGTTTGGCAGTGAATCACA 57.936 45.000 16.38 0.00 36.74 3.58
785 795 2.596346 TGGTTTGGCAGTGAATCACAT 58.404 42.857 16.38 0.00 36.74 3.21
786 796 2.964464 TGGTTTGGCAGTGAATCACATT 59.036 40.909 16.38 0.00 36.74 2.71
787 797 3.243805 TGGTTTGGCAGTGAATCACATTG 60.244 43.478 16.38 7.19 38.88 2.82
793 803 3.861276 CAGTGAATCACATTGCATGGT 57.139 42.857 16.38 0.00 36.74 3.55
794 804 4.182693 CAGTGAATCACATTGCATGGTT 57.817 40.909 16.38 0.00 36.74 3.67
795 805 4.562082 CAGTGAATCACATTGCATGGTTT 58.438 39.130 16.38 0.00 36.74 3.27
796 806 5.712004 CAGTGAATCACATTGCATGGTTTA 58.288 37.500 16.38 0.00 36.74 2.01
797 807 6.157904 CAGTGAATCACATTGCATGGTTTAA 58.842 36.000 16.38 0.00 36.74 1.52
798 808 6.645827 CAGTGAATCACATTGCATGGTTTAAA 59.354 34.615 16.38 0.00 36.74 1.52
799 809 7.171167 CAGTGAATCACATTGCATGGTTTAAAA 59.829 33.333 16.38 0.00 36.74 1.52
800 810 7.879160 AGTGAATCACATTGCATGGTTTAAAAT 59.121 29.630 16.38 0.00 36.74 1.82
801 811 8.505625 GTGAATCACATTGCATGGTTTAAAATT 58.494 29.630 8.74 0.00 34.08 1.82
802 812 8.504815 TGAATCACATTGCATGGTTTAAAATTG 58.495 29.630 0.00 0.00 33.60 2.32
803 813 8.618702 AATCACATTGCATGGTTTAAAATTGA 57.381 26.923 0.00 0.00 33.60 2.57
804 814 8.618702 ATCACATTGCATGGTTTAAAATTGAA 57.381 26.923 0.00 0.00 33.60 2.69
805 815 8.442632 TCACATTGCATGGTTTAAAATTGAAA 57.557 26.923 0.00 0.00 33.60 2.69
806 816 9.064706 TCACATTGCATGGTTTAAAATTGAAAT 57.935 25.926 0.00 0.00 33.60 2.17
807 817 9.332301 CACATTGCATGGTTTAAAATTGAAATC 57.668 29.630 0.00 0.00 33.60 2.17
808 818 9.064706 ACATTGCATGGTTTAAAATTGAAATCA 57.935 25.926 0.00 0.00 31.72 2.57
832 842 9.996554 TCATAAAATCTCTAGACAACAAACTGA 57.003 29.630 0.00 0.00 0.00 3.41
857 867 7.593875 TTAAATTTGAGCAATGCCACAATAC 57.406 32.000 14.01 0.00 0.00 1.89
858 868 3.591196 TTTGAGCAATGCCACAATACC 57.409 42.857 14.01 0.00 0.00 2.73
859 869 2.212812 TGAGCAATGCCACAATACCA 57.787 45.000 0.00 0.00 0.00 3.25
860 870 2.093890 TGAGCAATGCCACAATACCAG 58.906 47.619 0.00 0.00 0.00 4.00
862 872 1.005805 AGCAATGCCACAATACCAGGA 59.994 47.619 0.00 0.00 0.00 3.86
863 873 1.406539 GCAATGCCACAATACCAGGAG 59.593 52.381 0.00 0.00 0.00 3.69
864 874 2.726821 CAATGCCACAATACCAGGAGT 58.273 47.619 0.00 0.00 0.00 3.85
869 880 4.098155 TGCCACAATACCAGGAGTTACTA 58.902 43.478 0.00 0.00 0.00 1.82
880 891 2.830321 AGGAGTTACTACTTCGGTTGGG 59.170 50.000 0.00 0.00 34.84 4.12
881 892 2.614779 GAGTTACTACTTCGGTTGGGC 58.385 52.381 0.00 0.00 33.84 5.36
895 906 1.951923 TTGGGCTGCCATCCATCCAT 61.952 55.000 22.05 0.00 31.16 3.41
896 907 1.605738 GGGCTGCCATCCATCCATC 60.606 63.158 22.05 0.00 31.16 3.51
897 908 1.605738 GGCTGCCATCCATCCATCC 60.606 63.158 15.17 0.00 29.96 3.51
899 910 0.251653 GCTGCCATCCATCCATCCAT 60.252 55.000 0.00 0.00 0.00 3.41
900 911 1.835494 CTGCCATCCATCCATCCATC 58.165 55.000 0.00 0.00 0.00 3.51
901 912 0.406750 TGCCATCCATCCATCCATCC 59.593 55.000 0.00 0.00 0.00 3.51
1080 1097 1.227089 CCACGCGAATGAGGAGGAG 60.227 63.158 15.93 0.00 0.00 3.69
1290 1445 3.592814 CCGGCCAGCGACGATCTA 61.593 66.667 2.24 0.00 0.00 1.98
1417 1572 1.817099 GGCTTCTCTGCCCATCACG 60.817 63.158 0.00 0.00 46.82 4.35
1725 1880 3.053896 CGTTTGGCCGTTCCCTCC 61.054 66.667 0.00 0.00 0.00 4.30
1726 1881 2.114411 GTTTGGCCGTTCCCTCCA 59.886 61.111 0.00 0.00 0.00 3.86
1747 1905 6.837312 TCCAAGTTTAAGATGGACTTTCTCA 58.163 36.000 2.76 0.00 38.30 3.27
1769 1927 4.687215 GGCGGTGCTCTGTGCTGA 62.687 66.667 3.20 0.00 43.37 4.26
1821 1979 2.358090 CCATTGGAGCCCATTCAAGGTA 60.358 50.000 0.00 0.00 31.53 3.08
1854 2012 6.097696 TGTCCATGTACAGAAAGGATAATCGA 59.902 38.462 0.33 0.00 0.00 3.59
1875 2042 2.218603 CCGGTTGCTTGTGTTTACTCT 58.781 47.619 0.00 0.00 0.00 3.24
1905 2072 3.052329 TGGTGTATGGGGCAATCTCATA 58.948 45.455 0.00 0.00 0.00 2.15
1908 2075 4.018960 GGTGTATGGGGCAATCTCATATCT 60.019 45.833 0.00 0.00 0.00 1.98
1923 2090 3.437049 TCATATCTACAGACGCTCGATGG 59.563 47.826 0.00 0.00 0.00 3.51
1980 2147 2.649331 ATGTCCTTTACTGGTCGTCG 57.351 50.000 0.00 0.00 0.00 5.12
2010 2180 2.251371 GACGGCGAAGGTTTGTGC 59.749 61.111 16.62 0.00 0.00 4.57
2011 2181 2.203153 ACGGCGAAGGTTTGTGCT 60.203 55.556 16.62 0.00 0.00 4.40
2106 2276 3.829601 CTCCCTGTCTCAGTAACTCACTT 59.170 47.826 0.00 0.00 34.26 3.16
2119 2289 6.909895 CAGTAACTCACTTAGACATCAGATCG 59.090 42.308 0.00 0.00 34.26 3.69
2190 2360 5.021458 AGATTCAAAATGTGGCAGAGGAAT 58.979 37.500 0.00 0.00 0.00 3.01
2329 2502 9.823647 GGTATGATGAGGATAATGGTGTAATAG 57.176 37.037 0.00 0.00 0.00 1.73
2419 2775 7.378966 TCGAAGCTATTGTCCCAATAATAGAG 58.621 38.462 0.00 0.00 38.29 2.43
2546 2902 7.775093 TGATGGAATACCTTCTGAAATAACAGG 59.225 37.037 0.00 0.00 39.92 4.00
2568 2924 4.862574 GGTTTTTGGTCACTTGTTGAAGAC 59.137 41.667 0.00 0.00 35.39 3.01
2571 2927 2.341846 GGTCACTTGTTGAAGACCCA 57.658 50.000 0.00 0.00 43.67 4.51
2576 2932 2.624838 CACTTGTTGAAGACCCATGCTT 59.375 45.455 0.00 0.00 32.98 3.91
2598 2954 7.598869 TGCTTCAAATCACTAGTACACTTGTAG 59.401 37.037 0.00 2.38 31.08 2.74
2653 3024 9.908152 AGGTTACATTTATTTAAAGCTGAACAC 57.092 29.630 0.00 0.00 0.00 3.32
2654 3025 9.135843 GGTTACATTTATTTAAAGCTGAACACC 57.864 33.333 0.00 0.00 0.00 4.16
2655 3026 9.685828 GTTACATTTATTTAAAGCTGAACACCA 57.314 29.630 0.00 0.00 0.00 4.17
2658 3029 9.606631 ACATTTATTTAAAGCTGAACACCAAAA 57.393 25.926 0.00 0.00 0.00 2.44
2662 3033 7.713764 ATTTAAAGCTGAACACCAAAATCAC 57.286 32.000 0.00 0.00 0.00 3.06
2664 3035 3.996150 AGCTGAACACCAAAATCACTG 57.004 42.857 0.00 0.00 0.00 3.66
2666 3037 2.035066 GCTGAACACCAAAATCACTGCT 59.965 45.455 0.00 0.00 0.00 4.24
2667 3038 3.635331 CTGAACACCAAAATCACTGCTG 58.365 45.455 0.00 0.00 0.00 4.41
2668 3039 3.023119 TGAACACCAAAATCACTGCTGT 58.977 40.909 0.00 0.00 0.00 4.40
2669 3040 3.446873 TGAACACCAAAATCACTGCTGTT 59.553 39.130 0.00 0.00 0.00 3.16
2670 3041 3.441496 ACACCAAAATCACTGCTGTTG 57.559 42.857 0.00 0.00 0.00 3.33
2671 3042 2.101249 ACACCAAAATCACTGCTGTTGG 59.899 45.455 9.21 9.21 43.60 3.77
2672 3043 1.069049 ACCAAAATCACTGCTGTTGGC 59.931 47.619 10.37 0.00 42.06 4.52
2673 3044 1.342174 CCAAAATCACTGCTGTTGGCT 59.658 47.619 0.00 0.00 42.39 4.75
2674 3045 2.400399 CAAAATCACTGCTGTTGGCTG 58.600 47.619 0.00 0.00 44.00 4.85
2680 3051 1.364901 CTGCTGTTGGCTGTTTGGG 59.635 57.895 0.00 0.00 42.39 4.12
2681 3052 2.029518 GCTGTTGGCTGTTTGGGC 59.970 61.111 0.00 0.00 38.06 5.36
2682 3053 2.795110 GCTGTTGGCTGTTTGGGCA 61.795 57.895 0.00 0.00 39.99 5.36
2683 3054 2.051941 CTGTTGGCTGTTTGGGCAT 58.948 52.632 0.00 0.00 41.29 4.40
2684 3055 0.320073 CTGTTGGCTGTTTGGGCATG 60.320 55.000 0.00 0.00 41.29 4.06
2685 3056 1.047596 TGTTGGCTGTTTGGGCATGT 61.048 50.000 0.00 0.00 41.29 3.21
2686 3057 0.965439 GTTGGCTGTTTGGGCATGTA 59.035 50.000 0.00 0.00 41.29 2.29
2687 3058 1.550072 GTTGGCTGTTTGGGCATGTAT 59.450 47.619 0.00 0.00 41.29 2.29
2688 3059 1.935799 TGGCTGTTTGGGCATGTATT 58.064 45.000 0.00 0.00 36.85 1.89
2689 3060 3.093057 TGGCTGTTTGGGCATGTATTA 57.907 42.857 0.00 0.00 36.85 0.98
2690 3061 3.641046 TGGCTGTTTGGGCATGTATTAT 58.359 40.909 0.00 0.00 36.85 1.28
2691 3062 4.029520 TGGCTGTTTGGGCATGTATTATT 58.970 39.130 0.00 0.00 36.85 1.40
2699 3070 7.601886 TGTTTGGGCATGTATTATTTTTGTCAG 59.398 33.333 0.00 0.00 0.00 3.51
2702 3073 6.070881 TGGGCATGTATTATTTTTGTCAGCTT 60.071 34.615 0.00 0.00 0.00 3.74
2906 3281 6.730960 TTTTGTCGGTTCATCTATGTAACC 57.269 37.500 11.30 11.30 36.00 2.85
2992 3367 1.303561 TGGTCACAGCCATTCCTGC 60.304 57.895 0.00 0.00 36.29 4.85
3195 3608 6.298361 TCATGGATGTTAATGATGGGTACAG 58.702 40.000 0.00 0.00 0.00 2.74
3302 3715 1.202891 GGCTGGGTGTTTGGTTAGACT 60.203 52.381 0.00 0.00 0.00 3.24
3329 3742 2.248835 CGGTTCGGTGCTTCGGTTT 61.249 57.895 0.01 0.00 0.00 3.27
3392 3805 6.425504 GTCTCATGGAAAATTGATAAGCGAG 58.574 40.000 0.00 0.00 0.00 5.03
3453 3866 9.367444 GAATAACCGAAGAAAACTGAGAATAGA 57.633 33.333 0.00 0.00 0.00 1.98
3565 3978 1.936656 GCGCTGGATATTCTCGCATGA 60.937 52.381 13.78 0.00 44.50 3.07
3595 4008 2.001812 CTGTGAAGGAGTGATGGTCG 57.998 55.000 0.00 0.00 0.00 4.79
3596 4009 0.037326 TGTGAAGGAGTGATGGTCGC 60.037 55.000 0.00 0.00 0.00 5.19
3791 4204 0.928505 TGGGATTGCATGAGGTGGAT 59.071 50.000 0.00 0.00 0.00 3.41
3822 4235 2.544903 CGGTGGTGATACGTGATATGCA 60.545 50.000 0.00 0.00 0.00 3.96
3878 4291 1.344953 TGTGGGACTGCTCCTGTTGT 61.345 55.000 0.00 0.00 36.68 3.32
3900 4313 5.127194 TGTCTAGAAGCTTCGTATTGATGGT 59.873 40.000 20.43 1.92 34.29 3.55
3981 4394 2.403252 ACCAGATCCAATGACCGAAC 57.597 50.000 0.00 0.00 0.00 3.95
3982 4395 1.909302 ACCAGATCCAATGACCGAACT 59.091 47.619 0.00 0.00 0.00 3.01
3983 4396 2.093447 ACCAGATCCAATGACCGAACTC 60.093 50.000 0.00 0.00 0.00 3.01
3984 4397 2.093500 CCAGATCCAATGACCGAACTCA 60.093 50.000 0.00 0.00 0.00 3.41
3985 4398 2.932614 CAGATCCAATGACCGAACTCAC 59.067 50.000 0.00 0.00 0.00 3.51
3986 4399 2.093447 AGATCCAATGACCGAACTCACC 60.093 50.000 0.00 0.00 0.00 4.02
3987 4400 0.037697 TCCAATGACCGAACTCACCG 60.038 55.000 0.00 0.00 0.00 4.94
3988 4401 0.037697 CCAATGACCGAACTCACCGA 60.038 55.000 0.00 0.00 0.00 4.69
3989 4402 1.606994 CCAATGACCGAACTCACCGAA 60.607 52.381 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 6.516718 TGTCAGGTTTCAAAACACAAAAAGA 58.483 32.000 7.82 0.00 40.63 2.52
24 25 4.737054 CAAGAATTATGTGGCCTGTTGTC 58.263 43.478 3.32 0.00 0.00 3.18
31 32 5.922544 GTCATAATGCAAGAATTATGTGGCC 59.077 40.000 16.59 0.00 45.05 5.36
32 33 5.626543 CGTCATAATGCAAGAATTATGTGGC 59.373 40.000 16.59 9.83 45.05 5.01
33 34 6.852853 GTCGTCATAATGCAAGAATTATGTGG 59.147 38.462 16.59 11.48 45.05 4.17
34 35 7.408910 TGTCGTCATAATGCAAGAATTATGTG 58.591 34.615 16.59 12.12 45.05 3.21
35 36 7.552458 TGTCGTCATAATGCAAGAATTATGT 57.448 32.000 16.59 0.00 45.05 2.29
36 37 9.110617 GAATGTCGTCATAATGCAAGAATTATG 57.889 33.333 12.64 12.64 45.69 1.90
37 38 9.060347 AGAATGTCGTCATAATGCAAGAATTAT 57.940 29.630 0.00 0.00 33.85 1.28
38 39 8.437360 AGAATGTCGTCATAATGCAAGAATTA 57.563 30.769 0.00 0.00 33.49 1.40
39 40 7.325660 AGAATGTCGTCATAATGCAAGAATT 57.674 32.000 0.00 0.00 33.49 2.17
53 55 6.737254 TTATCAGGGAAAAAGAATGTCGTC 57.263 37.500 0.00 0.00 0.00 4.20
55 57 6.555315 CCTTTATCAGGGAAAAAGAATGTCG 58.445 40.000 0.00 0.00 39.39 4.35
69 71 7.768240 AGTTAATAAAAACGCCCTTTATCAGG 58.232 34.615 0.00 0.00 37.12 3.86
109 111 5.187687 TGATGCTTTGTATCTGCTTGATGA 58.812 37.500 3.60 0.00 36.65 2.92
120 122 4.142315 GGTGTTGCTCATGATGCTTTGTAT 60.142 41.667 15.20 0.00 0.00 2.29
125 127 1.180029 GGGTGTTGCTCATGATGCTT 58.820 50.000 15.20 0.00 0.00 3.91
131 133 1.003355 AGGTCGGGTGTTGCTCATG 60.003 57.895 0.00 0.00 0.00 3.07
143 145 5.300752 AGAATGTTATAATGCAGAGGTCGG 58.699 41.667 0.00 0.00 0.00 4.79
169 171 7.418337 AATAAGCTAAAAACCGGAATGGATT 57.582 32.000 9.46 0.37 42.00 3.01
170 172 7.418337 AAATAAGCTAAAAACCGGAATGGAT 57.582 32.000 9.46 0.00 42.00 3.41
171 173 6.844097 AAATAAGCTAAAAACCGGAATGGA 57.156 33.333 9.46 0.00 42.00 3.41
172 174 7.899178 AAAAATAAGCTAAAAACCGGAATGG 57.101 32.000 9.46 0.00 46.41 3.16
260 262 5.883673 AGGCTTTTTAAGGACGTATATGCAA 59.116 36.000 0.00 0.00 0.00 4.08
262 264 7.307811 CCTTAGGCTTTTTAAGGACGTATATGC 60.308 40.741 7.87 0.00 46.63 3.14
267 269 4.835678 CCCTTAGGCTTTTTAAGGACGTA 58.164 43.478 14.12 0.00 46.63 3.57
290 292 3.991367 ACTAAACAAGAACCTCACTCCG 58.009 45.455 0.00 0.00 0.00 4.63
293 295 5.878669 ACGAAAACTAAACAAGAACCTCACT 59.121 36.000 0.00 0.00 0.00 3.41
323 327 7.090953 ACGTCTACATTGGTTTCAAAAAGAA 57.909 32.000 0.00 0.00 36.36 2.52
324 328 6.687081 ACGTCTACATTGGTTTCAAAAAGA 57.313 33.333 0.00 0.00 36.36 2.52
325 329 8.844441 TTAACGTCTACATTGGTTTCAAAAAG 57.156 30.769 0.00 0.00 36.36 2.27
331 335 8.715088 ACTATGTTTAACGTCTACATTGGTTTC 58.285 33.333 13.20 0.00 34.55 2.78
362 372 9.070179 GGATTTGGTACTCAAAAGTAAAAGGTA 57.930 33.333 11.79 0.00 46.93 3.08
363 373 7.562088 TGGATTTGGTACTCAAAAGTAAAAGGT 59.438 33.333 11.79 0.00 46.93 3.50
364 374 7.947282 TGGATTTGGTACTCAAAAGTAAAAGG 58.053 34.615 11.79 0.00 46.93 3.11
374 384 9.177608 CTGAAATTATCTGGATTTGGTACTCAA 57.822 33.333 0.00 0.00 0.00 3.02
375 385 7.283127 GCTGAAATTATCTGGATTTGGTACTCA 59.717 37.037 0.00 0.00 0.00 3.41
376 386 7.500559 AGCTGAAATTATCTGGATTTGGTACTC 59.499 37.037 0.00 0.00 0.00 2.59
377 387 7.349598 AGCTGAAATTATCTGGATTTGGTACT 58.650 34.615 0.00 0.00 0.00 2.73
378 388 7.573968 AGCTGAAATTATCTGGATTTGGTAC 57.426 36.000 0.00 0.00 0.00 3.34
379 389 9.120538 GTAAGCTGAAATTATCTGGATTTGGTA 57.879 33.333 0.00 0.00 0.00 3.25
380 390 7.068716 GGTAAGCTGAAATTATCTGGATTTGGT 59.931 37.037 0.00 0.00 0.00 3.67
381 391 7.068593 TGGTAAGCTGAAATTATCTGGATTTGG 59.931 37.037 0.00 0.00 0.00 3.28
382 392 7.999679 TGGTAAGCTGAAATTATCTGGATTTG 58.000 34.615 0.00 0.00 0.00 2.32
383 393 8.593945 TTGGTAAGCTGAAATTATCTGGATTT 57.406 30.769 0.00 0.00 0.00 2.17
384 394 8.593945 TTTGGTAAGCTGAAATTATCTGGATT 57.406 30.769 0.00 0.00 0.00 3.01
385 395 7.836183 ACTTTGGTAAGCTGAAATTATCTGGAT 59.164 33.333 0.00 0.00 34.60 3.41
386 396 7.175104 ACTTTGGTAAGCTGAAATTATCTGGA 58.825 34.615 0.00 0.00 34.60 3.86
387 397 7.396540 ACTTTGGTAAGCTGAAATTATCTGG 57.603 36.000 0.00 0.00 34.60 3.86
388 398 9.774742 GTTACTTTGGTAAGCTGAAATTATCTG 57.225 33.333 0.00 0.00 38.42 2.90
389 399 9.515226 TGTTACTTTGGTAAGCTGAAATTATCT 57.485 29.630 0.00 0.00 38.42 1.98
392 402 9.515226 AGATGTTACTTTGGTAAGCTGAAATTA 57.485 29.630 0.00 0.00 38.42 1.40
393 403 8.409358 AGATGTTACTTTGGTAAGCTGAAATT 57.591 30.769 0.00 0.00 38.42 1.82
394 404 7.665559 TGAGATGTTACTTTGGTAAGCTGAAAT 59.334 33.333 0.00 0.00 38.42 2.17
395 405 6.995686 TGAGATGTTACTTTGGTAAGCTGAAA 59.004 34.615 0.00 0.00 38.42 2.69
396 406 6.530120 TGAGATGTTACTTTGGTAAGCTGAA 58.470 36.000 0.00 0.00 38.42 3.02
397 407 6.109156 TGAGATGTTACTTTGGTAAGCTGA 57.891 37.500 0.00 0.00 38.42 4.26
398 408 6.428159 ACTTGAGATGTTACTTTGGTAAGCTG 59.572 38.462 0.00 0.00 38.42 4.24
399 409 6.534634 ACTTGAGATGTTACTTTGGTAAGCT 58.465 36.000 0.00 0.00 38.42 3.74
400 410 6.803154 ACTTGAGATGTTACTTTGGTAAGC 57.197 37.500 0.00 0.00 38.42 3.09
401 411 9.706691 TCTAACTTGAGATGTTACTTTGGTAAG 57.293 33.333 0.00 0.00 38.42 2.34
404 414 9.574516 AAATCTAACTTGAGATGTTACTTTGGT 57.425 29.630 0.00 0.00 36.28 3.67
418 428 9.847224 ACAACCTAAGAGAAAAATCTAACTTGA 57.153 29.630 0.00 0.00 0.00 3.02
419 429 9.884465 CACAACCTAAGAGAAAAATCTAACTTG 57.116 33.333 0.00 0.00 0.00 3.16
420 430 8.568794 GCACAACCTAAGAGAAAAATCTAACTT 58.431 33.333 0.00 0.00 0.00 2.66
421 431 7.939588 AGCACAACCTAAGAGAAAAATCTAACT 59.060 33.333 0.00 0.00 0.00 2.24
422 432 8.100508 AGCACAACCTAAGAGAAAAATCTAAC 57.899 34.615 0.00 0.00 0.00 2.34
423 433 8.691661 AAGCACAACCTAAGAGAAAAATCTAA 57.308 30.769 0.00 0.00 0.00 2.10
424 434 8.691661 AAAGCACAACCTAAGAGAAAAATCTA 57.308 30.769 0.00 0.00 0.00 1.98
425 435 7.588497 AAAGCACAACCTAAGAGAAAAATCT 57.412 32.000 0.00 0.00 0.00 2.40
426 436 8.648557 AAAAAGCACAACCTAAGAGAAAAATC 57.351 30.769 0.00 0.00 0.00 2.17
449 459 4.479158 AGACAAGCCCAACCATCTAAAAA 58.521 39.130 0.00 0.00 0.00 1.94
450 460 4.079253 GAGACAAGCCCAACCATCTAAAA 58.921 43.478 0.00 0.00 0.00 1.52
451 461 3.561313 GGAGACAAGCCCAACCATCTAAA 60.561 47.826 0.00 0.00 0.00 1.85
452 462 2.026262 GGAGACAAGCCCAACCATCTAA 60.026 50.000 0.00 0.00 0.00 2.10
453 463 1.559682 GGAGACAAGCCCAACCATCTA 59.440 52.381 0.00 0.00 0.00 1.98
454 464 0.329596 GGAGACAAGCCCAACCATCT 59.670 55.000 0.00 0.00 0.00 2.90
455 465 0.681243 GGGAGACAAGCCCAACCATC 60.681 60.000 0.00 0.00 45.31 3.51
456 466 1.384191 GGGAGACAAGCCCAACCAT 59.616 57.895 0.00 0.00 45.31 3.55
457 467 2.843545 GGGAGACAAGCCCAACCA 59.156 61.111 0.00 0.00 45.31 3.67
462 472 1.073923 TCTTTTGAGGGAGACAAGCCC 59.926 52.381 0.00 0.00 46.40 5.19
463 473 2.568623 TCTTTTGAGGGAGACAAGCC 57.431 50.000 0.00 0.00 0.00 4.35
464 474 4.918810 TTTTCTTTTGAGGGAGACAAGC 57.081 40.909 0.00 0.00 0.00 4.01
465 475 6.348540 CCGTATTTTCTTTTGAGGGAGACAAG 60.349 42.308 0.00 0.00 0.00 3.16
466 476 5.472137 CCGTATTTTCTTTTGAGGGAGACAA 59.528 40.000 0.00 0.00 0.00 3.18
467 477 5.001232 CCGTATTTTCTTTTGAGGGAGACA 58.999 41.667 0.00 0.00 0.00 3.41
468 478 5.001874 ACCGTATTTTCTTTTGAGGGAGAC 58.998 41.667 0.00 0.00 0.00 3.36
469 479 5.221762 TGACCGTATTTTCTTTTGAGGGAGA 60.222 40.000 0.00 0.00 0.00 3.71
470 480 5.001232 TGACCGTATTTTCTTTTGAGGGAG 58.999 41.667 0.00 0.00 0.00 4.30
471 481 4.975631 TGACCGTATTTTCTTTTGAGGGA 58.024 39.130 0.00 0.00 0.00 4.20
472 482 4.156008 CCTGACCGTATTTTCTTTTGAGGG 59.844 45.833 0.00 0.00 0.00 4.30
473 483 4.379499 GCCTGACCGTATTTTCTTTTGAGG 60.379 45.833 0.00 0.00 0.00 3.86
474 484 4.455877 AGCCTGACCGTATTTTCTTTTGAG 59.544 41.667 0.00 0.00 0.00 3.02
475 485 4.394729 AGCCTGACCGTATTTTCTTTTGA 58.605 39.130 0.00 0.00 0.00 2.69
476 486 4.766404 AGCCTGACCGTATTTTCTTTTG 57.234 40.909 0.00 0.00 0.00 2.44
477 487 4.583073 ACAAGCCTGACCGTATTTTCTTTT 59.417 37.500 0.00 0.00 0.00 2.27
478 488 4.142038 ACAAGCCTGACCGTATTTTCTTT 58.858 39.130 0.00 0.00 0.00 2.52
479 489 3.751518 ACAAGCCTGACCGTATTTTCTT 58.248 40.909 0.00 0.00 0.00 2.52
480 490 3.244422 TGACAAGCCTGACCGTATTTTCT 60.244 43.478 0.00 0.00 0.00 2.52
481 491 3.071479 TGACAAGCCTGACCGTATTTTC 58.929 45.455 0.00 0.00 0.00 2.29
482 492 3.074412 CTGACAAGCCTGACCGTATTTT 58.926 45.455 0.00 0.00 0.00 1.82
483 493 2.699954 CTGACAAGCCTGACCGTATTT 58.300 47.619 0.00 0.00 0.00 1.40
484 494 1.676014 GCTGACAAGCCTGACCGTATT 60.676 52.381 0.00 0.00 44.22 1.89
485 495 0.108138 GCTGACAAGCCTGACCGTAT 60.108 55.000 0.00 0.00 44.22 3.06
486 496 1.292223 GCTGACAAGCCTGACCGTA 59.708 57.895 0.00 0.00 44.22 4.02
487 497 2.031163 GCTGACAAGCCTGACCGT 59.969 61.111 0.00 0.00 44.22 4.83
496 506 2.411409 GCGAAAGAGAAGAGCTGACAAG 59.589 50.000 0.00 0.00 0.00 3.16
497 507 2.408050 GCGAAAGAGAAGAGCTGACAA 58.592 47.619 0.00 0.00 0.00 3.18
498 508 1.337260 GGCGAAAGAGAAGAGCTGACA 60.337 52.381 0.00 0.00 0.00 3.58
499 509 1.337260 TGGCGAAAGAGAAGAGCTGAC 60.337 52.381 0.00 0.00 0.00 3.51
500 510 0.969149 TGGCGAAAGAGAAGAGCTGA 59.031 50.000 0.00 0.00 0.00 4.26
501 511 1.357907 CTGGCGAAAGAGAAGAGCTG 58.642 55.000 0.00 0.00 0.00 4.24
502 512 0.248843 CCTGGCGAAAGAGAAGAGCT 59.751 55.000 0.00 0.00 0.00 4.09
503 513 0.247736 TCCTGGCGAAAGAGAAGAGC 59.752 55.000 0.00 0.00 0.00 4.09
504 514 1.821753 TCTCCTGGCGAAAGAGAAGAG 59.178 52.381 0.00 0.00 33.80 2.85
505 515 1.924731 TCTCCTGGCGAAAGAGAAGA 58.075 50.000 0.00 0.00 33.80 2.87
506 516 2.751166 TTCTCCTGGCGAAAGAGAAG 57.249 50.000 6.73 0.00 40.73 2.85
508 518 2.461695 AGATTCTCCTGGCGAAAGAGA 58.538 47.619 2.84 0.00 34.90 3.10
509 519 2.977772 AGATTCTCCTGGCGAAAGAG 57.022 50.000 2.84 0.00 0.00 2.85
510 520 3.007940 TCAAAGATTCTCCTGGCGAAAGA 59.992 43.478 2.84 0.00 0.00 2.52
511 521 3.338249 TCAAAGATTCTCCTGGCGAAAG 58.662 45.455 2.84 0.00 0.00 2.62
512 522 3.417069 TCAAAGATTCTCCTGGCGAAA 57.583 42.857 2.84 0.00 0.00 3.46
513 523 3.634397 ATCAAAGATTCTCCTGGCGAA 57.366 42.857 0.97 0.97 0.00 4.70
514 524 3.273434 CAATCAAAGATTCTCCTGGCGA 58.727 45.455 0.00 0.00 0.00 5.54
515 525 2.223433 GCAATCAAAGATTCTCCTGGCG 60.223 50.000 0.00 0.00 0.00 5.69
516 526 2.756760 TGCAATCAAAGATTCTCCTGGC 59.243 45.455 0.00 0.00 0.00 4.85
517 527 5.593679 AATGCAATCAAAGATTCTCCTGG 57.406 39.130 0.00 0.00 0.00 4.45
518 528 6.183360 GCAAAATGCAATCAAAGATTCTCCTG 60.183 38.462 0.00 0.00 44.26 3.86
519 529 5.873164 GCAAAATGCAATCAAAGATTCTCCT 59.127 36.000 0.00 0.00 44.26 3.69
520 530 6.103222 GCAAAATGCAATCAAAGATTCTCC 57.897 37.500 0.00 0.00 44.26 3.71
535 545 5.177326 TGATGGTCAATAAAGGCAAAATGC 58.823 37.500 0.00 0.00 44.08 3.56
536 546 7.042950 TGATGATGGTCAATAAAGGCAAAATG 58.957 34.615 0.00 0.00 0.00 2.32
537 547 7.185318 TGATGATGGTCAATAAAGGCAAAAT 57.815 32.000 0.00 0.00 0.00 1.82
538 548 6.602410 TGATGATGGTCAATAAAGGCAAAA 57.398 33.333 0.00 0.00 0.00 2.44
539 549 6.602410 TTGATGATGGTCAATAAAGGCAAA 57.398 33.333 0.00 0.00 33.41 3.68
540 550 6.014755 TGTTTGATGATGGTCAATAAAGGCAA 60.015 34.615 0.00 0.00 37.88 4.52
541 551 5.479724 TGTTTGATGATGGTCAATAAAGGCA 59.520 36.000 0.00 0.00 37.88 4.75
542 552 5.964758 TGTTTGATGATGGTCAATAAAGGC 58.035 37.500 0.00 0.00 37.88 4.35
543 553 9.520204 GTAATGTTTGATGATGGTCAATAAAGG 57.480 33.333 0.00 0.00 37.88 3.11
544 554 9.225201 CGTAATGTTTGATGATGGTCAATAAAG 57.775 33.333 0.00 0.00 37.88 1.85
545 555 8.735315 ACGTAATGTTTGATGATGGTCAATAAA 58.265 29.630 0.00 0.00 37.88 1.40
546 556 8.275015 ACGTAATGTTTGATGATGGTCAATAA 57.725 30.769 0.00 0.00 37.88 1.40
547 557 7.254286 CGACGTAATGTTTGATGATGGTCAATA 60.254 37.037 0.00 0.00 37.88 1.90
548 558 6.456853 CGACGTAATGTTTGATGATGGTCAAT 60.457 38.462 0.00 0.00 37.88 2.57
549 559 5.163903 CGACGTAATGTTTGATGATGGTCAA 60.164 40.000 0.00 0.00 36.38 3.18
550 560 4.328712 CGACGTAATGTTTGATGATGGTCA 59.671 41.667 0.00 0.00 0.00 4.02
551 561 4.782195 GCGACGTAATGTTTGATGATGGTC 60.782 45.833 0.00 0.00 0.00 4.02
552 562 3.063452 GCGACGTAATGTTTGATGATGGT 59.937 43.478 0.00 0.00 0.00 3.55
553 563 3.063316 TGCGACGTAATGTTTGATGATGG 59.937 43.478 0.00 0.00 0.00 3.51
554 564 4.257536 TGCGACGTAATGTTTGATGATG 57.742 40.909 0.00 0.00 0.00 3.07
555 565 6.597262 TTATGCGACGTAATGTTTGATGAT 57.403 33.333 0.00 0.00 0.00 2.45
556 566 6.410243 TTTATGCGACGTAATGTTTGATGA 57.590 33.333 0.00 0.00 0.00 2.92
557 567 6.904543 TCATTTATGCGACGTAATGTTTGATG 59.095 34.615 6.41 0.00 31.59 3.07
558 568 7.010697 TCATTTATGCGACGTAATGTTTGAT 57.989 32.000 6.41 0.00 31.59 2.57
559 569 6.311690 TCTCATTTATGCGACGTAATGTTTGA 59.688 34.615 6.41 2.65 31.59 2.69
560 570 6.474364 TCTCATTTATGCGACGTAATGTTTG 58.526 36.000 6.41 0.85 31.59 2.93
561 571 6.238103 CCTCTCATTTATGCGACGTAATGTTT 60.238 38.462 6.41 0.00 31.59 2.83
562 572 5.234329 CCTCTCATTTATGCGACGTAATGTT 59.766 40.000 6.41 0.00 31.59 2.71
563 573 4.745125 CCTCTCATTTATGCGACGTAATGT 59.255 41.667 6.41 0.00 31.59 2.71
564 574 4.982295 TCCTCTCATTTATGCGACGTAATG 59.018 41.667 0.00 0.00 0.00 1.90
565 575 5.196341 TCCTCTCATTTATGCGACGTAAT 57.804 39.130 0.00 0.00 0.00 1.89
566 576 4.642445 TCCTCTCATTTATGCGACGTAA 57.358 40.909 0.00 0.00 0.00 3.18
567 577 4.337274 TCTTCCTCTCATTTATGCGACGTA 59.663 41.667 0.00 0.00 0.00 3.57
568 578 3.130516 TCTTCCTCTCATTTATGCGACGT 59.869 43.478 0.00 0.00 0.00 4.34
569 579 3.706698 TCTTCCTCTCATTTATGCGACG 58.293 45.455 0.00 0.00 0.00 5.12
570 580 6.610741 ATTTCTTCCTCTCATTTATGCGAC 57.389 37.500 0.00 0.00 0.00 5.19
571 581 7.272244 TGTATTTCTTCCTCTCATTTATGCGA 58.728 34.615 0.00 0.00 0.00 5.10
572 582 7.225538 ACTGTATTTCTTCCTCTCATTTATGCG 59.774 37.037 0.00 0.00 0.00 4.73
573 583 8.443953 ACTGTATTTCTTCCTCTCATTTATGC 57.556 34.615 0.00 0.00 0.00 3.14
577 587 8.924511 TCAAACTGTATTTCTTCCTCTCATTT 57.075 30.769 0.00 0.00 0.00 2.32
578 588 9.525826 AATCAAACTGTATTTCTTCCTCTCATT 57.474 29.630 0.00 0.00 0.00 2.57
579 589 9.525826 AAATCAAACTGTATTTCTTCCTCTCAT 57.474 29.630 0.00 0.00 0.00 2.90
580 590 8.924511 AAATCAAACTGTATTTCTTCCTCTCA 57.075 30.769 0.00 0.00 0.00 3.27
581 591 9.833182 GAAAATCAAACTGTATTTCTTCCTCTC 57.167 33.333 0.00 0.00 0.00 3.20
582 592 9.579932 AGAAAATCAAACTGTATTTCTTCCTCT 57.420 29.630 0.00 0.00 37.10 3.69
588 598 9.956720 CTGTGAAGAAAATCAAACTGTATTTCT 57.043 29.630 0.00 0.00 40.90 2.52
589 599 9.736023 ACTGTGAAGAAAATCAAACTGTATTTC 57.264 29.630 0.00 0.00 0.00 2.17
593 603 9.391006 ACTAACTGTGAAGAAAATCAAACTGTA 57.609 29.630 0.00 0.00 0.00 2.74
594 604 8.281212 ACTAACTGTGAAGAAAATCAAACTGT 57.719 30.769 0.00 0.00 0.00 3.55
611 621 8.522542 TTTTGTTTATACCCAACACTAACTGT 57.477 30.769 0.00 0.00 33.81 3.55
612 622 9.620660 GATTTTGTTTATACCCAACACTAACTG 57.379 33.333 0.00 0.00 33.81 3.16
613 623 8.508875 CGATTTTGTTTATACCCAACACTAACT 58.491 33.333 0.00 0.00 33.81 2.24
614 624 8.505625 TCGATTTTGTTTATACCCAACACTAAC 58.494 33.333 0.00 0.00 33.81 2.34
615 625 8.618702 TCGATTTTGTTTATACCCAACACTAA 57.381 30.769 0.00 0.00 33.81 2.24
616 626 8.505625 GTTCGATTTTGTTTATACCCAACACTA 58.494 33.333 0.00 0.00 33.81 2.74
617 627 7.364970 GTTCGATTTTGTTTATACCCAACACT 58.635 34.615 0.00 0.00 33.81 3.55
618 628 6.583427 GGTTCGATTTTGTTTATACCCAACAC 59.417 38.462 0.00 0.00 33.81 3.32
619 629 6.264744 TGGTTCGATTTTGTTTATACCCAACA 59.735 34.615 0.00 0.00 32.16 3.33
620 630 6.679843 TGGTTCGATTTTGTTTATACCCAAC 58.320 36.000 0.00 0.00 0.00 3.77
621 631 6.490721 ACTGGTTCGATTTTGTTTATACCCAA 59.509 34.615 0.00 0.00 0.00 4.12
622 632 6.005198 ACTGGTTCGATTTTGTTTATACCCA 58.995 36.000 0.00 0.00 0.00 4.51
623 633 6.319399 CACTGGTTCGATTTTGTTTATACCC 58.681 40.000 0.00 0.00 0.00 3.69
624 634 5.798434 GCACTGGTTCGATTTTGTTTATACC 59.202 40.000 0.00 0.00 0.00 2.73
625 635 6.608610 AGCACTGGTTCGATTTTGTTTATAC 58.391 36.000 0.00 0.00 0.00 1.47
626 636 6.811253 AGCACTGGTTCGATTTTGTTTATA 57.189 33.333 0.00 0.00 0.00 0.98
627 637 5.705609 AGCACTGGTTCGATTTTGTTTAT 57.294 34.783 0.00 0.00 0.00 1.40
628 638 6.811253 ATAGCACTGGTTCGATTTTGTTTA 57.189 33.333 0.00 0.00 0.00 2.01
629 639 5.705609 ATAGCACTGGTTCGATTTTGTTT 57.294 34.783 0.00 0.00 0.00 2.83
630 640 6.811253 TTATAGCACTGGTTCGATTTTGTT 57.189 33.333 0.00 0.00 0.00 2.83
631 641 6.811253 TTTATAGCACTGGTTCGATTTTGT 57.189 33.333 0.00 0.00 0.00 2.83
632 642 9.221775 GTTATTTATAGCACTGGTTCGATTTTG 57.778 33.333 0.00 0.00 0.00 2.44
633 643 8.952278 TGTTATTTATAGCACTGGTTCGATTTT 58.048 29.630 0.00 0.00 0.00 1.82
634 644 8.500753 TGTTATTTATAGCACTGGTTCGATTT 57.499 30.769 0.00 0.00 0.00 2.17
635 645 8.500753 TTGTTATTTATAGCACTGGTTCGATT 57.499 30.769 0.00 0.00 0.00 3.34
636 646 8.500753 TTTGTTATTTATAGCACTGGTTCGAT 57.499 30.769 0.00 0.00 0.00 3.59
637 647 7.908827 TTTGTTATTTATAGCACTGGTTCGA 57.091 32.000 0.00 0.00 0.00 3.71
638 648 8.394877 TCATTTGTTATTTATAGCACTGGTTCG 58.605 33.333 0.00 0.00 0.00 3.95
639 649 9.503427 GTCATTTGTTATTTATAGCACTGGTTC 57.497 33.333 0.00 0.00 0.00 3.62
640 650 9.019656 TGTCATTTGTTATTTATAGCACTGGTT 57.980 29.630 0.00 0.00 0.00 3.67
641 651 8.574251 TGTCATTTGTTATTTATAGCACTGGT 57.426 30.769 0.00 0.00 0.00 4.00
642 652 9.669353 GATGTCATTTGTTATTTATAGCACTGG 57.331 33.333 0.00 0.00 0.00 4.00
643 653 9.669353 GGATGTCATTTGTTATTTATAGCACTG 57.331 33.333 0.00 0.00 0.00 3.66
644 654 9.632638 AGGATGTCATTTGTTATTTATAGCACT 57.367 29.630 0.00 0.00 0.00 4.40
697 707 9.647797 CACGGCTTGGTACATATTATTTCTATA 57.352 33.333 0.00 0.00 39.30 1.31
698 708 8.154856 ACACGGCTTGGTACATATTATTTCTAT 58.845 33.333 0.00 0.00 39.30 1.98
699 709 7.502696 ACACGGCTTGGTACATATTATTTCTA 58.497 34.615 0.00 0.00 39.30 2.10
700 710 6.354130 ACACGGCTTGGTACATATTATTTCT 58.646 36.000 0.00 0.00 39.30 2.52
701 711 6.613755 ACACGGCTTGGTACATATTATTTC 57.386 37.500 0.00 0.00 39.30 2.17
702 712 6.600032 TCAACACGGCTTGGTACATATTATTT 59.400 34.615 0.00 0.00 39.30 1.40
703 713 6.116806 TCAACACGGCTTGGTACATATTATT 58.883 36.000 0.00 0.00 39.30 1.40
704 714 5.676552 TCAACACGGCTTGGTACATATTAT 58.323 37.500 0.00 0.00 39.30 1.28
705 715 5.087391 TCAACACGGCTTGGTACATATTA 57.913 39.130 0.00 0.00 39.30 0.98
706 716 3.945346 TCAACACGGCTTGGTACATATT 58.055 40.909 0.00 0.00 39.30 1.28
707 717 3.620427 TCAACACGGCTTGGTACATAT 57.380 42.857 0.00 0.00 39.30 1.78
708 718 3.527533 GATCAACACGGCTTGGTACATA 58.472 45.455 0.00 0.00 39.30 2.29
709 719 2.356135 GATCAACACGGCTTGGTACAT 58.644 47.619 0.00 0.00 39.30 2.29
710 720 1.803334 GATCAACACGGCTTGGTACA 58.197 50.000 0.00 0.00 0.00 2.90
711 721 0.719465 CGATCAACACGGCTTGGTAC 59.281 55.000 0.00 0.00 0.00 3.34
712 722 1.017177 GCGATCAACACGGCTTGGTA 61.017 55.000 0.00 0.00 0.00 3.25
713 723 2.325082 GCGATCAACACGGCTTGGT 61.325 57.895 0.00 0.00 0.00 3.67
714 724 2.034879 AGCGATCAACACGGCTTGG 61.035 57.895 0.00 0.00 0.00 3.61
715 725 1.133253 CAGCGATCAACACGGCTTG 59.867 57.895 0.00 0.00 0.00 4.01
716 726 0.037697 TACAGCGATCAACACGGCTT 60.038 50.000 0.00 0.00 0.00 4.35
717 727 0.175760 ATACAGCGATCAACACGGCT 59.824 50.000 0.00 0.00 0.00 5.52
718 728 1.787155 CTATACAGCGATCAACACGGC 59.213 52.381 0.00 0.00 0.00 5.68
719 729 3.349488 TCTATACAGCGATCAACACGG 57.651 47.619 0.00 0.00 0.00 4.94
720 730 5.696260 TTTTCTATACAGCGATCAACACG 57.304 39.130 0.00 0.00 0.00 4.49
721 731 6.248631 GGTTTTTCTATACAGCGATCAACAC 58.751 40.000 0.00 0.00 0.00 3.32
722 732 5.062934 CGGTTTTTCTATACAGCGATCAACA 59.937 40.000 0.00 0.00 31.89 3.33
723 733 5.290158 TCGGTTTTTCTATACAGCGATCAAC 59.710 40.000 0.00 0.00 34.45 3.18
724 734 5.412640 TCGGTTTTTCTATACAGCGATCAA 58.587 37.500 0.00 0.00 34.45 2.57
725 735 5.001237 TCGGTTTTTCTATACAGCGATCA 57.999 39.130 0.00 0.00 34.45 2.92
726 736 7.328737 ACATATCGGTTTTTCTATACAGCGATC 59.671 37.037 8.24 0.00 44.27 3.69
728 738 6.509656 ACATATCGGTTTTTCTATACAGCGA 58.490 36.000 0.00 0.00 42.71 4.93
729 739 6.398621 CGACATATCGGTTTTTCTATACAGCG 60.399 42.308 0.00 0.00 44.99 5.18
730 740 6.808264 CGACATATCGGTTTTTCTATACAGC 58.192 40.000 0.00 0.00 44.99 4.40
746 756 7.254658 CCAAACCAACTATTACCACGACATATC 60.255 40.741 0.00 0.00 0.00 1.63
747 757 6.540914 CCAAACCAACTATTACCACGACATAT 59.459 38.462 0.00 0.00 0.00 1.78
748 758 5.875910 CCAAACCAACTATTACCACGACATA 59.124 40.000 0.00 0.00 0.00 2.29
749 759 4.698304 CCAAACCAACTATTACCACGACAT 59.302 41.667 0.00 0.00 0.00 3.06
750 760 4.066490 CCAAACCAACTATTACCACGACA 58.934 43.478 0.00 0.00 0.00 4.35
751 761 3.120095 GCCAAACCAACTATTACCACGAC 60.120 47.826 0.00 0.00 0.00 4.34
752 762 3.075884 GCCAAACCAACTATTACCACGA 58.924 45.455 0.00 0.00 0.00 4.35
753 763 2.814919 TGCCAAACCAACTATTACCACG 59.185 45.455 0.00 0.00 0.00 4.94
754 764 3.824443 ACTGCCAAACCAACTATTACCAC 59.176 43.478 0.00 0.00 0.00 4.16
755 765 3.823873 CACTGCCAAACCAACTATTACCA 59.176 43.478 0.00 0.00 0.00 3.25
756 766 4.076394 TCACTGCCAAACCAACTATTACC 58.924 43.478 0.00 0.00 0.00 2.85
757 767 5.699097 TTCACTGCCAAACCAACTATTAC 57.301 39.130 0.00 0.00 0.00 1.89
758 768 6.007076 TGATTCACTGCCAAACCAACTATTA 58.993 36.000 0.00 0.00 0.00 0.98
759 769 4.832266 TGATTCACTGCCAAACCAACTATT 59.168 37.500 0.00 0.00 0.00 1.73
760 770 4.218417 GTGATTCACTGCCAAACCAACTAT 59.782 41.667 9.59 0.00 0.00 2.12
761 771 3.568007 GTGATTCACTGCCAAACCAACTA 59.432 43.478 9.59 0.00 0.00 2.24
762 772 2.362077 GTGATTCACTGCCAAACCAACT 59.638 45.455 9.59 0.00 0.00 3.16
763 773 2.100584 TGTGATTCACTGCCAAACCAAC 59.899 45.455 17.26 0.00 35.11 3.77
764 774 2.382882 TGTGATTCACTGCCAAACCAA 58.617 42.857 17.26 0.00 35.11 3.67
765 775 2.064434 TGTGATTCACTGCCAAACCA 57.936 45.000 17.26 0.00 35.11 3.67
766 776 3.319755 CAATGTGATTCACTGCCAAACC 58.680 45.455 17.26 0.00 35.11 3.27
767 777 2.733026 GCAATGTGATTCACTGCCAAAC 59.267 45.455 17.26 0.00 32.01 2.93
768 778 2.364647 TGCAATGTGATTCACTGCCAAA 59.635 40.909 21.49 6.90 35.57 3.28
769 779 1.962100 TGCAATGTGATTCACTGCCAA 59.038 42.857 21.49 7.45 35.57 4.52
770 780 1.618487 TGCAATGTGATTCACTGCCA 58.382 45.000 21.49 11.38 35.57 4.92
771 781 2.536365 CATGCAATGTGATTCACTGCC 58.464 47.619 21.49 9.57 40.20 4.85
772 782 2.094390 ACCATGCAATGTGATTCACTGC 60.094 45.455 18.98 18.98 44.81 4.40
773 783 3.861276 ACCATGCAATGTGATTCACTG 57.139 42.857 17.26 9.57 44.81 3.66
774 784 4.877378 AAACCATGCAATGTGATTCACT 57.123 36.364 17.26 1.18 44.81 3.41
775 785 7.418840 TTTTAAACCATGCAATGTGATTCAC 57.581 32.000 9.93 9.93 44.81 3.18
776 786 8.504815 CAATTTTAAACCATGCAATGTGATTCA 58.495 29.630 0.00 0.00 44.81 2.57
777 787 8.719648 TCAATTTTAAACCATGCAATGTGATTC 58.280 29.630 0.00 0.00 44.81 2.52
778 788 8.618702 TCAATTTTAAACCATGCAATGTGATT 57.381 26.923 0.00 0.00 44.81 2.57
779 789 8.618702 TTCAATTTTAAACCATGCAATGTGAT 57.381 26.923 0.00 0.00 44.81 3.06
780 790 8.442632 TTTCAATTTTAAACCATGCAATGTGA 57.557 26.923 0.00 0.00 44.81 3.58
781 791 9.332301 GATTTCAATTTTAAACCATGCAATGTG 57.668 29.630 0.00 0.00 44.81 3.21
782 792 9.064706 TGATTTCAATTTTAAACCATGCAATGT 57.935 25.926 0.00 0.00 44.81 2.71
806 816 9.996554 TCAGTTTGTTGTCTAGAGATTTTATGA 57.003 29.630 0.00 0.00 0.00 2.15
818 828 9.677567 GCTCAAATTTAATCAGTTTGTTGTCTA 57.322 29.630 0.00 0.00 35.09 2.59
819 829 8.196771 TGCTCAAATTTAATCAGTTTGTTGTCT 58.803 29.630 0.00 0.00 35.09 3.41
820 830 8.351495 TGCTCAAATTTAATCAGTTTGTTGTC 57.649 30.769 0.00 0.00 35.09 3.18
821 831 8.715191 TTGCTCAAATTTAATCAGTTTGTTGT 57.285 26.923 0.00 0.00 35.09 3.32
822 832 9.588774 CATTGCTCAAATTTAATCAGTTTGTTG 57.411 29.630 0.00 0.00 35.09 3.33
823 833 8.284693 GCATTGCTCAAATTTAATCAGTTTGTT 58.715 29.630 0.16 0.00 35.09 2.83
824 834 7.095102 GGCATTGCTCAAATTTAATCAGTTTGT 60.095 33.333 8.82 0.00 35.09 2.83
825 835 7.095144 TGGCATTGCTCAAATTTAATCAGTTTG 60.095 33.333 8.82 0.00 34.90 2.93
826 836 6.935771 TGGCATTGCTCAAATTTAATCAGTTT 59.064 30.769 8.82 0.00 0.00 2.66
827 837 6.369615 GTGGCATTGCTCAAATTTAATCAGTT 59.630 34.615 8.82 0.00 0.00 3.16
828 838 5.870978 GTGGCATTGCTCAAATTTAATCAGT 59.129 36.000 8.82 0.00 0.00 3.41
829 839 5.870433 TGTGGCATTGCTCAAATTTAATCAG 59.130 36.000 8.82 0.00 0.00 2.90
830 840 5.791666 TGTGGCATTGCTCAAATTTAATCA 58.208 33.333 8.82 0.00 0.00 2.57
831 841 6.724694 TTGTGGCATTGCTCAAATTTAATC 57.275 33.333 8.82 0.00 0.00 1.75
832 842 7.280652 GGTATTGTGGCATTGCTCAAATTTAAT 59.719 33.333 17.92 8.06 0.00 1.40
833 843 6.593382 GGTATTGTGGCATTGCTCAAATTTAA 59.407 34.615 17.92 2.14 0.00 1.52
834 844 6.105333 GGTATTGTGGCATTGCTCAAATTTA 58.895 36.000 17.92 8.36 0.00 1.40
835 845 4.937015 GGTATTGTGGCATTGCTCAAATTT 59.063 37.500 17.92 9.04 0.00 1.82
836 846 4.020396 TGGTATTGTGGCATTGCTCAAATT 60.020 37.500 17.92 9.53 0.00 1.82
843 853 1.406539 CTCCTGGTATTGTGGCATTGC 59.593 52.381 0.00 0.00 0.00 3.56
857 867 3.368116 CCAACCGAAGTAGTAACTCCTGG 60.368 52.174 0.00 0.00 33.75 4.45
858 868 3.368116 CCCAACCGAAGTAGTAACTCCTG 60.368 52.174 0.00 0.00 33.75 3.86
859 869 2.830321 CCCAACCGAAGTAGTAACTCCT 59.170 50.000 0.00 0.00 33.75 3.69
860 870 2.676176 GCCCAACCGAAGTAGTAACTCC 60.676 54.545 0.00 0.00 33.75 3.85
862 872 2.028385 CAGCCCAACCGAAGTAGTAACT 60.028 50.000 0.00 0.00 37.65 2.24
863 873 2.344025 CAGCCCAACCGAAGTAGTAAC 58.656 52.381 0.00 0.00 0.00 2.50
864 874 1.338389 GCAGCCCAACCGAAGTAGTAA 60.338 52.381 0.00 0.00 0.00 2.24
869 880 3.210012 ATGGCAGCCCAACCGAAGT 62.210 57.895 9.64 0.00 46.14 3.01
880 891 0.251653 ATGGATGGATGGATGGCAGC 60.252 55.000 0.00 0.00 0.00 5.25
881 892 1.616187 GGATGGATGGATGGATGGCAG 60.616 57.143 0.00 0.00 0.00 4.85
895 906 6.372931 TCTTTCCTTTTTCTTCTTGGATGGA 58.627 36.000 0.00 0.00 0.00 3.41
896 907 6.655078 TCTTTCCTTTTTCTTCTTGGATGG 57.345 37.500 0.00 0.00 0.00 3.51
897 908 7.168135 CGTTTCTTTCCTTTTTCTTCTTGGATG 59.832 37.037 0.00 0.00 0.00 3.51
899 910 6.376018 TCGTTTCTTTCCTTTTTCTTCTTGGA 59.624 34.615 0.00 0.00 0.00 3.53
900 911 6.560711 TCGTTTCTTTCCTTTTTCTTCTTGG 58.439 36.000 0.00 0.00 0.00 3.61
901 912 6.693113 CCTCGTTTCTTTCCTTTTTCTTCTTG 59.307 38.462 0.00 0.00 0.00 3.02
1080 1097 2.126110 CGGGTTGCAATTTCGGCC 60.126 61.111 0.59 0.00 0.00 6.13
1428 1583 2.359602 TCGAAGACGCCGAGGAGT 60.360 61.111 0.00 0.00 39.58 3.85
1723 1878 6.837312 TGAGAAAGTCCATCTTAAACTTGGA 58.163 36.000 0.00 0.00 37.20 3.53
1725 1880 7.072030 CGTTGAGAAAGTCCATCTTAAACTTG 58.928 38.462 0.00 0.00 35.02 3.16
1726 1881 6.293462 GCGTTGAGAAAGTCCATCTTAAACTT 60.293 38.462 0.00 0.00 35.02 2.66
1821 1979 6.295349 CCTTTCTGTACATGGACACTAAGACT 60.295 42.308 21.22 0.00 0.00 3.24
1854 2012 1.944709 GAGTAAACACAAGCAACCGGT 59.055 47.619 0.00 0.00 0.00 5.28
1875 2042 1.622607 CCCATACACCAGCCTCCGAA 61.623 60.000 0.00 0.00 0.00 4.30
1905 2072 0.955178 CCCATCGAGCGTCTGTAGAT 59.045 55.000 0.00 0.00 0.00 1.98
1908 2075 2.125326 CCCCCATCGAGCGTCTGTA 61.125 63.158 0.00 0.00 0.00 2.74
1923 2090 1.683385 GGATTAGCATCAACAAGCCCC 59.317 52.381 0.00 0.00 0.00 5.80
1980 2147 1.548973 CGCCGTCACACACAGACTTC 61.549 60.000 0.00 0.00 33.89 3.01
2010 2180 7.756395 ATCATTTGTGAGCCTATCCAAATAG 57.244 36.000 0.00 0.00 37.01 1.73
2106 2276 3.023832 TGCCTTGACGATCTGATGTCTA 58.976 45.455 15.94 10.58 36.10 2.59
2119 2289 1.079503 GAACCATCGTCTGCCTTGAC 58.920 55.000 0.00 0.00 0.00 3.18
2190 2360 4.085009 TGGCAACACCATGACAATCAATA 58.915 39.130 0.00 0.00 46.36 1.90
2246 2416 4.041444 GGTGATGAGAGAGCCCAAGAATAT 59.959 45.833 0.00 0.00 0.00 1.28
2329 2502 1.877443 ACTGGCGTCCACATGTAAAAC 59.123 47.619 0.00 0.00 0.00 2.43
2517 2873 9.178758 GTTATTTCAGAAGGTATTCCATCAACT 57.821 33.333 0.00 0.00 35.94 3.16
2542 2898 3.829601 TCAACAAGTGACCAAAAACCTGT 59.170 39.130 0.00 0.00 0.00 4.00
2546 2902 4.862574 GGTCTTCAACAAGTGACCAAAAAC 59.137 41.667 6.18 0.00 45.87 2.43
2568 2924 5.065218 GTGTACTAGTGATTTGAAGCATGGG 59.935 44.000 5.39 0.00 0.00 4.00
2571 2927 6.936900 ACAAGTGTACTAGTGATTTGAAGCAT 59.063 34.615 5.39 0.00 0.00 3.79
2598 2954 8.579682 AGAGACAAGAAATTAAAAATGTGCAC 57.420 30.769 10.75 10.75 0.00 4.57
2628 2999 9.135843 GGTGTTCAGCTTTAAATAAATGTAACC 57.864 33.333 0.00 0.00 0.00 2.85
2635 3006 9.823647 TGATTTTGGTGTTCAGCTTTAAATAAA 57.176 25.926 3.76 0.00 0.00 1.40
2637 3008 8.637986 AGTGATTTTGGTGTTCAGCTTTAAATA 58.362 29.630 3.76 0.00 0.00 1.40
2638 3009 7.439056 CAGTGATTTTGGTGTTCAGCTTTAAAT 59.561 33.333 3.76 6.74 0.00 1.40
2639 3010 6.756074 CAGTGATTTTGGTGTTCAGCTTTAAA 59.244 34.615 3.76 0.00 0.00 1.52
2642 3013 4.685924 CAGTGATTTTGGTGTTCAGCTTT 58.314 39.130 3.76 0.00 0.00 3.51
2643 3014 3.491447 GCAGTGATTTTGGTGTTCAGCTT 60.491 43.478 0.00 0.00 0.00 3.74
2644 3015 2.035066 GCAGTGATTTTGGTGTTCAGCT 59.965 45.455 0.00 0.00 0.00 4.24
2645 3016 2.035066 AGCAGTGATTTTGGTGTTCAGC 59.965 45.455 0.00 0.00 0.00 4.26
2646 3017 3.635331 CAGCAGTGATTTTGGTGTTCAG 58.365 45.455 0.00 0.00 38.78 3.02
2647 3018 3.713858 CAGCAGTGATTTTGGTGTTCA 57.286 42.857 0.00 0.00 38.78 3.18
2651 3022 2.746269 CCAACAGCAGTGATTTTGGTG 58.254 47.619 16.49 6.75 46.50 4.17
2652 3023 1.069049 GCCAACAGCAGTGATTTTGGT 59.931 47.619 23.38 0.00 42.97 3.67
2653 3024 1.787012 GCCAACAGCAGTGATTTTGG 58.213 50.000 19.66 19.66 42.97 3.28
2664 3035 2.029518 GCCCAAACAGCCAACAGC 59.970 61.111 0.00 0.00 44.25 4.40
2666 3037 1.047596 ACATGCCCAAACAGCCAACA 61.048 50.000 0.00 0.00 0.00 3.33
2667 3038 0.965439 TACATGCCCAAACAGCCAAC 59.035 50.000 0.00 0.00 0.00 3.77
2668 3039 1.935799 ATACATGCCCAAACAGCCAA 58.064 45.000 0.00 0.00 0.00 4.52
2669 3040 1.935799 AATACATGCCCAAACAGCCA 58.064 45.000 0.00 0.00 0.00 4.75
2670 3041 4.670896 AATAATACATGCCCAAACAGCC 57.329 40.909 0.00 0.00 0.00 4.85
2671 3042 6.371271 ACAAAAATAATACATGCCCAAACAGC 59.629 34.615 0.00 0.00 0.00 4.40
2672 3043 7.601886 TGACAAAAATAATACATGCCCAAACAG 59.398 33.333 0.00 0.00 0.00 3.16
2673 3044 7.445121 TGACAAAAATAATACATGCCCAAACA 58.555 30.769 0.00 0.00 0.00 2.83
2674 3045 7.412891 GCTGACAAAAATAATACATGCCCAAAC 60.413 37.037 0.00 0.00 0.00 2.93
2675 3046 6.593382 GCTGACAAAAATAATACATGCCCAAA 59.407 34.615 0.00 0.00 0.00 3.28
2676 3047 6.070881 AGCTGACAAAAATAATACATGCCCAA 60.071 34.615 0.00 0.00 0.00 4.12
2677 3048 5.421693 AGCTGACAAAAATAATACATGCCCA 59.578 36.000 0.00 0.00 0.00 5.36
2678 3049 5.906073 AGCTGACAAAAATAATACATGCCC 58.094 37.500 0.00 0.00 0.00 5.36
2679 3050 7.035004 TCAAGCTGACAAAAATAATACATGCC 58.965 34.615 0.00 0.00 0.00 4.40
2680 3051 8.638685 ATCAAGCTGACAAAAATAATACATGC 57.361 30.769 0.00 0.00 0.00 4.06
2686 3057 8.199449 CCCACATATCAAGCTGACAAAAATAAT 58.801 33.333 0.00 0.00 0.00 1.28
2687 3058 7.395772 TCCCACATATCAAGCTGACAAAAATAA 59.604 33.333 0.00 0.00 0.00 1.40
2688 3059 6.889177 TCCCACATATCAAGCTGACAAAAATA 59.111 34.615 0.00 0.00 0.00 1.40
2689 3060 5.716228 TCCCACATATCAAGCTGACAAAAAT 59.284 36.000 0.00 0.00 0.00 1.82
2690 3061 5.076182 TCCCACATATCAAGCTGACAAAAA 58.924 37.500 0.00 0.00 0.00 1.94
2691 3062 4.661222 TCCCACATATCAAGCTGACAAAA 58.339 39.130 0.00 0.00 0.00 2.44
2699 3070 7.148171 GCCTAGAATTTATCCCACATATCAAGC 60.148 40.741 0.00 0.00 0.00 4.01
2702 3073 7.017551 ACTGCCTAGAATTTATCCCACATATCA 59.982 37.037 0.00 0.00 0.00 2.15
2906 3281 2.540265 AAGAGGCAACAGTGAGTCAG 57.460 50.000 0.00 0.00 41.41 3.51
2992 3367 0.179065 TTCAGCTCCATCGCATCCAG 60.179 55.000 0.00 0.00 0.00 3.86
3398 3811 1.467342 GAACCAAACTATCGGTGCACC 59.533 52.381 26.78 26.78 35.08 5.01
3453 3866 3.933861 ACGGATTTCTTGCTCCCTAAT 57.066 42.857 0.00 0.00 0.00 1.73
3573 3986 0.742281 CCATCACTCCTTCACAGCCG 60.742 60.000 0.00 0.00 0.00 5.52
3614 4027 1.298667 GACAACGTACATGGCCCCT 59.701 57.895 0.00 0.00 0.00 4.79
3714 4127 2.126346 GCGGCAGCACCAATGTTC 60.126 61.111 3.18 0.00 44.35 3.18
3767 4180 0.033796 CCTCATGCAATCCCAGTGGT 60.034 55.000 8.74 0.00 0.00 4.16
3791 4204 1.576368 ATCACCACCGCCCCCATTTA 61.576 55.000 0.00 0.00 0.00 1.40
3878 4291 5.594725 AGACCATCAATACGAAGCTTCTAGA 59.405 40.000 23.50 13.61 0.00 2.43
3900 4313 5.514834 GCCCATCATAACTAAGCCCAATAGA 60.515 44.000 0.00 0.00 0.00 1.98
3987 4400 8.635983 GCACAAATCTAAAACCGAAATAAGTTC 58.364 33.333 0.00 0.00 0.00 3.01
3988 4401 7.325097 CGCACAAATCTAAAACCGAAATAAGTT 59.675 33.333 0.00 0.00 0.00 2.66
3989 4402 6.799925 CGCACAAATCTAAAACCGAAATAAGT 59.200 34.615 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.