AutoCloner

Multiple sequence alignment - TraesCS3D01G063400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3D01G063400	chr3D	100.000	2669	0	0	1	2669	27943090	27945758	0.000000e+00	4929.0
1	TraesCS3D01G063400	chr3D	87.507	1689	134	35	703	2317	27551483	27549798	0.000000e+00	1879.0
2	TraesCS3D01G063400	chr3D	93.023	43	3	0	2621	2663	506705321	506705279	2.220000e-06	63.9
3	TraesCS3D01G063400	chr3A	93.240	2633	111	19	46	2669	37828328	37825754	0.000000e+00	3814.0
4	TraesCS3D01G063400	chr3A	90.093	969	75	9	703	1667	37651503	37650552	0.000000e+00	1238.0
5	TraesCS3D01G063400	chr3A	85.323	1022	89	24	804	1773	38124779	38125791	0.000000e+00	1000.0
6	TraesCS3D01G063400	chr3A	87.730	326	35	4	1880	2203	37650270	37649948	2.510000e-100	375.0
7	TraesCS3D01G063400	chr3A	85.235	298	39	4	1885	2180	38125971	38126265	4.320000e-78	302.0
8	TraesCS3D01G063400	chr3A	89.091	55	5	1	64	118	37652112	37652059	1.710000e-07	67.6
9	TraesCS3D01G063400	chr3B	90.925	1135	79	8	532	1664	46903639	46904751	0.000000e+00	1504.0
10	TraesCS3D01G063400	chr3B	91.125	969	70	5	703	1667	46033630	46032674	0.000000e+00	1299.0
11	TraesCS3D01G063400	chr3B	85.438	1188	84	36	3	1184	46792525	46793629	0.000000e+00	1153.0
12	TraesCS3D01G063400	chr3B	88.940	651	52	4	1014	1664	46932191	46932821	0.000000e+00	785.0
13	TraesCS3D01G063400	chr3B	87.742	465	44	8	1880	2338	46032399	46031942	5.060000e-147	531.0
14	TraesCS3D01G063400	chr3B	89.964	279	20	5	124	402	46797200	46797470	1.180000e-93	353.0
15	TraesCS3D01G063400	chr3B	92.903	155	11	0	659	813	46932038	46932192	2.670000e-55	226.0
16	TraesCS3D01G063400	chrUn	88.172	651	63	1	1017	1667	287642994	287642358	0.000000e+00	763.0
17	TraesCS3D01G063400	chrUn	84.946	93	10	2	2028	2116	347229041	347229133	1.020000e-14	91.6
18	TraesCS3D01G063400	chrUn	90.698	43	4	0	2622	2664	916169	916127	1.030000e-04	58.4
19	TraesCS3D01G063400	chr1B	95.652	46	2	0	2622	2667	420234592	420234637	1.020000e-09	75.0
20	TraesCS3D01G063400	chr1B	95.556	45	2	0	2623	2667	301273396	301273440	3.690000e-09	73.1
21	TraesCS3D01G063400	chr7D	95.556	45	2	0	2623	2667	241189307	241189351	3.690000e-09	73.1
22	TraesCS3D01G063400	chr5B	95.349	43	2	0	2625	2667	501957058	501957016	4.770000e-08	69.4
23	TraesCS3D01G063400	chr1A	90.698	43	4	0	2622	2664	391737587	391737629	1.030000e-04	58.4
24	TraesCS3D01G063400	chr1A	90.698	43	4	0	2622	2664	391827779	391827821	1.030000e-04	58.4

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3D01G063400	chr3D	27943090	27945758	2668	False	4929.0	4929	100.000000	1	2669	1	chr3D.!!$F1	2668
1	TraesCS3D01G063400	chr3D	27549798	27551483	1685	True	1879.0	1879	87.507000	703	2317	1	chr3D.!!$R1	1614
2	TraesCS3D01G063400	chr3A	37825754	37828328	2574	True	3814.0	3814	93.240000	46	2669	1	chr3A.!!$R1	2623
3	TraesCS3D01G063400	chr3A	38124779	38126265	1486	False	651.0	1000	85.279000	804	2180	2	chr3A.!!$F1	1376
4	TraesCS3D01G063400	chr3A	37649948	37652112	2164	True	560.2	1238	88.971333	64	2203	3	chr3A.!!$R2	2139
5	TraesCS3D01G063400	chr3B	46903639	46904751	1112	False	1504.0	1504	90.925000	532	1664	1	chr3B.!!$F1	1132
6	TraesCS3D01G063400	chr3B	46031942	46033630	1688	True	915.0	1299	89.433500	703	2338	2	chr3B.!!$R1	1635
7	TraesCS3D01G063400	chr3B	46792525	46797470	4945	False	753.0	1153	87.701000	3	1184	2	chr3B.!!$F2	1181
8	TraesCS3D01G063400	chr3B	46932038	46932821	783	False	505.5	785	90.921500	659	1664	2	chr3B.!!$F3	1005
9	TraesCS3D01G063400	chrUn	287642358	287642994	636	True	763.0	763	88.172000	1017	1667	1	chrUn.!!$R2	650

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
424	491	0.592637	TGCTGATTTGCGAACCACTG	59.407	50.0	0.0	0.0	35.36	3.66	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2315	3393	1.0656	CTCTCTGCCGAGTGCTAGC	59.934	63.158	8.1	8.1	42.0	3.42	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
254	285	0.741915	CCACCGCTCTCCTCTACTTC	59.258	60.000	0.00	0.00	0.00	3.01
269	300	2.930826	ACTTCCACATTTGTCTCCGT	57.069	45.000	0.00	0.00	0.00	4.69
360	412	1.183030	TCCGGTGATGTCGACTGGTT	61.183	55.000	17.92	0.00	40.35	3.67
393	460	2.371910	TATGCACCGTGACGATTTCA	57.628	45.000	6.54	0.00	0.00	2.69
420	487	1.451651	CGTTTTGCTGATTTGCGAACC	59.548	47.619	0.00	0.00	36.21	3.62
421	488	2.468831	GTTTTGCTGATTTGCGAACCA	58.531	42.857	0.00	0.00	36.21	3.67
422	489	2.132740	TTTGCTGATTTGCGAACCAC	57.867	45.000	0.00	0.00	31.98	4.16
423	490	1.317613	TTGCTGATTTGCGAACCACT	58.682	45.000	0.00	0.00	35.36	4.00
424	491	0.592637	TGCTGATTTGCGAACCACTG	59.407	50.000	0.00	0.00	35.36	3.66
425	492	0.593128	GCTGATTTGCGAACCACTGT	59.407	50.000	0.00	0.00	0.00	3.55
426	493	1.664016	GCTGATTTGCGAACCACTGTG	60.664	52.381	0.00	0.00	0.00	3.66
427	494	1.872952	CTGATTTGCGAACCACTGTGA	59.127	47.619	9.86	0.00	0.00	3.58
428	495	1.601903	TGATTTGCGAACCACTGTGAC	59.398	47.619	9.86	0.00	0.00	3.67
452	519	7.453393	ACCTGTGAAATCGGATGTTATCATAT	58.547	34.615	0.00	0.00	34.06	1.78
503	573	3.748568	ACAAGCAGCAAAGCTACTAGTTC	59.251	43.478	0.00	0.00	45.89	3.01
504	574	3.685139	AGCAGCAAAGCTACTAGTTCA	57.315	42.857	0.00	0.00	44.50	3.18
505	575	3.594134	AGCAGCAAAGCTACTAGTTCAG	58.406	45.455	0.00	0.00	44.50	3.02
506	576	3.007398	AGCAGCAAAGCTACTAGTTCAGT	59.993	43.478	0.00	0.00	44.50	3.41
507	577	3.124297	GCAGCAAAGCTACTAGTTCAGTG	59.876	47.826	0.00	0.00	36.40	3.66
508	578	4.560128	CAGCAAAGCTACTAGTTCAGTGA	58.440	43.478	0.00	0.00	36.40	3.41
523	593	2.766263	TCAGTGACAGTCAGACTTTGGT	59.234	45.455	2.53	0.00	0.00	3.67
524	594	3.197766	TCAGTGACAGTCAGACTTTGGTT	59.802	43.478	2.53	0.00	0.00	3.67
525	595	3.941483	CAGTGACAGTCAGACTTTGGTTT	59.059	43.478	2.53	0.00	0.00	3.27
526	596	4.396166	CAGTGACAGTCAGACTTTGGTTTT	59.604	41.667	2.53	0.00	0.00	2.43
527	597	5.010282	AGTGACAGTCAGACTTTGGTTTTT	58.990	37.500	2.53	0.00	0.00	1.94
633	730	3.071023	CGGATACCATCACCATTACCACT	59.929	47.826	0.00	0.00	0.00	4.00
647	745	7.001674	ACCATTACCACTGAACACTAATTGAA	58.998	34.615	0.00	0.00	0.00	2.69
653	751	6.772716	ACCACTGAACACTAATTGAATTGAGT	59.227	34.615	0.00	0.00	0.00	3.41
776	874	1.501582	AGGGTAGCCTGGAGATGAAC	58.498	55.000	14.01	0.00	0.00	3.18
793	894	0.970427	AACCAAATGGCTTAGGGGCG	60.970	55.000	0.00	0.00	44.11	6.13
797	898	4.547367	ATGGCTTAGGGGCGTCGC	62.547	66.667	9.22	9.22	44.11	5.19
843	945	0.675633	CCTTCACCCTTTTGCCACAG	59.324	55.000	0.00	0.00	0.00	3.66
889	1004	2.080286	TCCGAAGCAAGTTCTGTAGC	57.920	50.000	0.00	0.00	32.33	3.58
914	1029	4.775236	ACTCCAAGAAATCTGATACAGGC	58.225	43.478	0.00	0.00	31.51	4.85
971	1104	9.527157	TCTCATCACTTTATTTAAACCCATGAA	57.473	29.630	0.00	0.00	0.00	2.57
1098	1238	1.457346	CTCTTCAAGATGTGTGCCCC	58.543	55.000	0.00	0.00	0.00	5.80
1141	1281	3.120321	AGCTGTTCATGAACGGTTACA	57.880	42.857	36.04	19.04	46.59	2.41
1161	1301	1.002868	CTGCAAGCACCCTAGCACT	60.003	57.895	0.00	0.00	36.85	4.40
1449	1612	2.238646	GTGTGAGGGGGATGTGTTCATA	59.761	50.000	0.00	0.00	34.06	2.15
1494	1657	2.890808	TCATGAACTATGGTCTCCGC	57.109	50.000	0.00	0.00	37.39	5.54
1536	1699	0.108585	TCAACAGTCAGAACCCTGGC	59.891	55.000	0.00	0.00	45.10	4.85
1749	1969	7.236529	AGACATGTATATGGGCAGAATTTCAT	58.763	34.615	0.00	0.00	38.66	2.57
1795	2217	9.915629	CTATACTCTAGCCGATTAATTTCTGTT	57.084	33.333	0.00	0.00	0.00	3.16
1935	2419	3.123621	CGTGGTGTTGTTTCTATCTCAGC	59.876	47.826	0.00	0.00	0.00	4.26
2042	2527	6.267471	TCTTTGATTTAGCATCACCAAGGTTT	59.733	34.615	0.00	0.00	0.00	3.27
2116	2601	1.748493	GCGGAACTCCATGCCATTTTA	59.252	47.619	0.00	0.00	35.14	1.52
2230	2961	8.256611	TCTCTCTTTATGGAAAGTTTGATTCG	57.743	34.615	0.00	0.00	42.41	3.34
2314	3392	1.399714	ACTCGTGCATAGGATTCCGA	58.600	50.000	0.00	0.00	0.00	4.55
2315	3393	1.338337	ACTCGTGCATAGGATTCCGAG	59.662	52.381	15.07	15.07	45.25	4.63
2316	3394	0.032130	TCGTGCATAGGATTCCGAGC	59.968	55.000	9.28	9.28	0.00	5.03
2317	3395	0.032678	CGTGCATAGGATTCCGAGCT	59.967	55.000	14.94	0.00	0.00	4.09
2533	4576	2.026262	TCTAGGCATGGTTGGTCTTTCC	60.026	50.000	0.00	0.00	0.00	3.13
2534	4577	0.482446	AGGCATGGTTGGTCTTTCCA	59.518	50.000	0.00	0.00	45.60	3.53
2535	4578	1.077663	AGGCATGGTTGGTCTTTCCAT	59.922	47.619	0.00	0.00	46.60	3.41
2539	4582	1.909700	TGGTTGGTCTTTCCATGAGC	58.090	50.000	0.00	0.00	46.60	4.26
2541	4584	1.815003	GGTTGGTCTTTCCATGAGCAG	59.185	52.381	0.00	0.00	46.60	4.24
2542	4585	1.815003	GTTGGTCTTTCCATGAGCAGG	59.185	52.381	0.00	0.00	46.60	4.85
2543	4586	1.361204	TGGTCTTTCCATGAGCAGGA	58.639	50.000	0.00	0.00	41.93	3.86
2544	4587	1.280133	TGGTCTTTCCATGAGCAGGAG	59.720	52.381	0.00	0.00	41.93	3.69
2546	4589	2.419851	GGTCTTTCCATGAGCAGGAGAG	60.420	54.545	0.00	0.00	38.40	3.20
2547	4590	2.235898	GTCTTTCCATGAGCAGGAGAGT	59.764	50.000	0.00	0.00	38.26	3.24
2550	4593	4.718774	TCTTTCCATGAGCAGGAGAGTAAT	59.281	41.667	0.00	0.00	38.26	1.89
2551	4594	5.190528	TCTTTCCATGAGCAGGAGAGTAATT	59.809	40.000	0.00	0.00	38.26	1.40
2575	4618	2.159476	TGTCTGGCTTGTCGTACGATAC	60.159	50.000	22.57	10.79	0.00	2.24
2603	5275	3.305964	ACGTTATGTGACTTGTGTCTCG	58.694	45.455	0.00	0.00	43.29	4.04
2649	5321	3.612860	CCTTCGTCTGGAATTACTTGTCG	59.387	47.826	0.00	0.00	33.26	4.35

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
102	103	4.699522	GGACCAAACCTCGCGCCT	62.700	66.667	0.00	0.00	0.00	5.52
254	285	2.480419	GACTCAACGGAGACAAATGTGG	59.520	50.000	0.00	0.00	44.26	4.17
360	412	2.616960	GTGCATAACGAGTCATCACCA	58.383	47.619	0.00	0.00	0.00	4.17
393	460	4.485163	GCAAATCAGCAAAACGAAGGTAT	58.515	39.130	0.00	0.00	0.00	2.73
420	487	1.800586	CCGATTTCACAGGTCACAGTG	59.199	52.381	0.00	0.00	35.63	3.66
421	488	1.691976	TCCGATTTCACAGGTCACAGT	59.308	47.619	0.00	0.00	0.00	3.55
422	489	2.455674	TCCGATTTCACAGGTCACAG	57.544	50.000	0.00	0.00	0.00	3.66
423	490	2.038426	ACATCCGATTTCACAGGTCACA	59.962	45.455	0.00	0.00	0.00	3.58
424	491	2.699954	ACATCCGATTTCACAGGTCAC	58.300	47.619	0.00	0.00	0.00	3.67
425	492	3.417069	AACATCCGATTTCACAGGTCA	57.583	42.857	0.00	0.00	0.00	4.02
426	493	5.116180	TGATAACATCCGATTTCACAGGTC	58.884	41.667	0.00	0.00	0.00	3.85
427	494	5.097742	TGATAACATCCGATTTCACAGGT	57.902	39.130	0.00	0.00	0.00	4.00
428	495	7.912056	ATATGATAACATCCGATTTCACAGG	57.088	36.000	0.00	0.00	37.87	4.00
473	543	3.508793	AGCTTTGCTGCTTGTGAACATAT	59.491	39.130	0.00	0.00	40.93	1.78
474	544	2.886523	AGCTTTGCTGCTTGTGAACATA	59.113	40.909	0.00	0.00	40.93	2.29
503	573	3.185246	ACCAAAGTCTGACTGTCACTG	57.815	47.619	11.71	0.00	0.00	3.66
504	574	3.914426	AACCAAAGTCTGACTGTCACT	57.086	42.857	11.71	0.43	0.00	3.41
505	575	4.965119	AAAACCAAAGTCTGACTGTCAC	57.035	40.909	11.71	0.00	0.00	3.67
527	597	9.248291	GCTTCTCATTGATTGTTCAAAAAGTAA	57.752	29.630	0.00	0.00	44.70	2.24
528	598	8.412456	TGCTTCTCATTGATTGTTCAAAAAGTA	58.588	29.630	0.00	0.00	44.70	2.24
529	599	7.267128	TGCTTCTCATTGATTGTTCAAAAAGT	58.733	30.769	0.00	0.00	44.70	2.66
530	600	7.703298	TGCTTCTCATTGATTGTTCAAAAAG	57.297	32.000	0.00	0.00	44.70	2.27
536	606	7.811236	TCAGAAATTGCTTCTCATTGATTGTTC	59.189	33.333	0.00	0.00	42.84	3.18
550	624	2.100584	TGGCGTGTTTCAGAAATTGCTT	59.899	40.909	13.45	0.00	0.00	3.91
653	751	5.220453	CGCGCATTGTATATGATGCTTGATA	60.220	40.000	8.75	0.00	44.90	2.15
776	874	1.379843	ACGCCCCTAAGCCATTTGG	60.380	57.895	0.00	0.00	38.53	3.28
793	894	2.211353	AGCTTTCCGATTCTAGCGAC	57.789	50.000	0.00	0.00	38.62	5.19
797	898	9.261180	TGTTAATATGAAGCTTTCCGATTCTAG	57.739	33.333	0.00	0.00	38.79	2.43
843	945	4.518970	TGGCCAAAGTAACAATCTCTGAAC	59.481	41.667	0.61	0.00	0.00	3.18
889	1004	5.521735	CCTGTATCAGATTTCTTGGAGTTCG	59.478	44.000	0.00	0.00	32.44	3.95
914	1029	1.342174	ACCAAAGCCAAATCTGTGCAG	59.658	47.619	0.00	0.00	0.00	4.41
971	1104	2.093128	ACGCGGAGATGGGAGTAAAAAT	60.093	45.455	12.47	0.00	0.00	1.82
975	1108	1.389609	GGACGCGGAGATGGGAGTAA	61.390	60.000	12.47	0.00	0.00	2.24
980	1113	4.227134	CCTGGACGCGGAGATGGG	62.227	72.222	12.47	0.47	0.00	4.00
1109	1249	0.609406	GAACAGCTTCCTTCCACCCC	60.609	60.000	0.00	0.00	0.00	4.95
1115	1255	2.160417	CCGTTCATGAACAGCTTCCTTC	59.840	50.000	32.06	7.25	41.20	3.46
1141	1281	0.393537	GTGCTAGGGTGCTTGCAGAT	60.394	55.000	0.00	0.00	35.95	2.90
1161	1301	6.818644	GTGTCTTGAAATCAGAAGCCAGTATA	59.181	38.462	0.00	0.00	0.00	1.47
1449	1612	1.334160	GAACCAAACCACGGGGAAAT	58.666	50.000	12.96	0.00	38.05	2.17
1494	1657	2.426183	CGAGAACGTCGTCGCAAGG	61.426	63.158	0.00	0.00	44.20	3.61
1726	1946	7.844493	AATGAAATTCTGCCCATATACATGT	57.156	32.000	2.69	2.69	0.00	3.21
1795	2217	5.633601	CGCGATACTGCTCTTTATAATTCCA	59.366	40.000	0.00	0.00	0.00	3.53
1914	2398	4.065088	TGCTGAGATAGAAACAACACCAC	58.935	43.478	0.00	0.00	0.00	4.16
2116	2601	9.988350	CAACGAGCAAAAAGATAACAATACTAT	57.012	29.630	0.00	0.00	0.00	2.12
2139	2625	1.079503	GACCTCCGATCAACTGCAAC	58.920	55.000	0.00	0.00	0.00	4.17
2150	2636	1.350019	GGAAAAGAAAGGGACCTCCGA	59.650	52.381	0.00	0.00	41.52	4.55
2151	2637	1.613520	GGGAAAAGAAAGGGACCTCCG	60.614	57.143	0.00	0.00	41.52	4.63
2230	2961	4.878397	GTGGCATCATAGGCATATTCCTAC	59.122	45.833	2.99	0.00	46.23	3.18
2314	3392	1.379176	TCTCTGCCGAGTGCTAGCT	60.379	57.895	17.23	0.00	42.00	3.32
2315	3393	1.065600	CTCTCTGCCGAGTGCTAGC	59.934	63.158	8.10	8.10	42.00	3.42
2316	3394	1.732917	CCTCTCTGCCGAGTGCTAG	59.267	63.158	4.97	0.00	42.00	3.42
2317	3395	1.754621	CCCTCTCTGCCGAGTGCTA	60.755	63.158	4.97	0.00	42.00	3.49
2330	3408	4.030913	TCGAGTAACCATTCATTCCCTCT	58.969	43.478	0.00	0.00	0.00	3.69
2437	4480	8.486210	GTGCTCCCTATTATCATGGTATATGAA	58.514	37.037	0.00	0.00	0.00	2.57
2447	4490	7.016563	TGACAATGTAGTGCTCCCTATTATCAT	59.983	37.037	0.00	0.00	0.00	2.45
2533	4576	5.366460	ACATGAATTACTCTCCTGCTCATG	58.634	41.667	0.00	7.43	42.69	3.07
2534	4577	5.366186	AGACATGAATTACTCTCCTGCTCAT	59.634	40.000	0.00	0.00	0.00	2.90
2535	4578	4.713814	AGACATGAATTACTCTCCTGCTCA	59.286	41.667	0.00	0.00	0.00	4.26
2536	4579	5.049167	CAGACATGAATTACTCTCCTGCTC	58.951	45.833	0.00	0.00	0.00	4.26
2539	4582	4.125703	GCCAGACATGAATTACTCTCCTG	58.874	47.826	0.00	0.00	0.00	3.86
2541	4584	4.414337	AGCCAGACATGAATTACTCTCC	57.586	45.455	0.00	0.00	0.00	3.71
2542	4585	5.181748	ACAAGCCAGACATGAATTACTCTC	58.818	41.667	0.00	0.00	0.00	3.20
2543	4586	5.171339	ACAAGCCAGACATGAATTACTCT	57.829	39.130	0.00	0.00	0.00	3.24
2544	4587	4.033358	CGACAAGCCAGACATGAATTACTC	59.967	45.833	0.00	0.00	0.00	2.59
2546	4589	3.684788	ACGACAAGCCAGACATGAATTAC	59.315	43.478	0.00	0.00	0.00	1.89
2547	4590	3.937814	ACGACAAGCCAGACATGAATTA	58.062	40.909	0.00	0.00	0.00	1.40
2550	4593	2.683968	GTACGACAAGCCAGACATGAA	58.316	47.619	0.00	0.00	0.00	2.57
2551	4594	1.402325	CGTACGACAAGCCAGACATGA	60.402	52.381	10.44	0.00	0.00	3.07
2575	4618	1.909376	AGTCACATAACGTGCTAGCG	58.091	50.000	10.77	0.00	45.92	4.26
2603	5275	6.862090	GGAAGTATGACGTAAGATGTATGACC	59.138	42.308	0.00	0.00	43.62	4.02

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.