Multiple sequence alignment - TraesCS3D01G059500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G059500 chr3D 100.000 3325 0 0 1 3325 26119792 26116468 0.000000e+00 6141.0
1 TraesCS3D01G059500 chr3D 96.970 33 1 0 399 431 610869321 610869353 4.630000e-04 56.5
2 TraesCS3D01G059500 chr3B 89.370 2841 178 52 201 2939 43347450 43344632 0.000000e+00 3459.0
3 TraesCS3D01G059500 chr3B 74.131 259 38 19 508 740 807075196 807075451 2.750000e-11 80.5
4 TraesCS3D01G059500 chr3B 100.000 31 0 0 399 429 555310033 555310063 1.290000e-04 58.4
5 TraesCS3D01G059500 chr3A 93.823 1635 64 14 1434 3059 35965139 35963533 0.000000e+00 2425.0
6 TraesCS3D01G059500 chr3A 88.353 1202 96 19 218 1379 35966335 35965138 0.000000e+00 1404.0
7 TraesCS3D01G059500 chr3A 80.342 117 19 4 667 780 444650735 444650620 5.910000e-13 86.1
8 TraesCS3D01G059500 chr3A 97.222 36 1 0 706 741 740807371 740807406 9.960000e-06 62.1
9 TraesCS3D01G059500 chr2D 96.642 268 7 2 3060 3325 513541501 513541234 8.460000e-121 444.0
10 TraesCS3D01G059500 chr2D 94.796 269 12 2 3059 3325 648516607 648516875 5.130000e-113 418.0
11 TraesCS3D01G059500 chr2D 94.403 268 13 2 3060 3325 58760057 58760324 8.590000e-111 411.0
12 TraesCS3D01G059500 chr2D 94.382 267 13 2 3060 3325 557798493 557798758 3.090000e-110 409.0
13 TraesCS3D01G059500 chr2D 81.111 90 15 1 667 756 603546974 603547061 1.650000e-08 71.3
14 TraesCS3D01G059500 chr2D 74.713 174 25 7 402 566 159596262 159596099 3.580000e-05 60.2
15 TraesCS3D01G059500 chr2D 94.118 34 2 0 396 429 524101767 524101800 6.000000e-03 52.8
16 TraesCS3D01G059500 chr5D 95.896 268 9 2 3060 3325 432570688 432570421 1.830000e-117 433.0
17 TraesCS3D01G059500 chr5D 95.896 268 9 2 3060 3325 556591616 556591349 1.830000e-117 433.0
18 TraesCS3D01G059500 chr1D 95.149 268 11 2 3060 3325 83946929 83947196 3.970000e-114 422.0
19 TraesCS3D01G059500 chr7D 94.424 269 13 2 3059 3325 35376205 35375937 2.390000e-111 412.0
20 TraesCS3D01G059500 chr7D 94.096 271 15 1 3056 3325 455700744 455701014 8.590000e-111 411.0
21 TraesCS3D01G059500 chr7D 74.740 289 44 17 395 667 635669017 635669292 5.870000e-18 102.0
22 TraesCS3D01G059500 chr7D 74.740 289 44 17 395 667 636338860 636338585 5.870000e-18 102.0
23 TraesCS3D01G059500 chr2A 80.723 166 30 2 2889 3053 73323486 73323322 9.680000e-26 128.0
24 TraesCS3D01G059500 chr2A 97.143 35 1 0 595 629 49186105 49186139 3.580000e-05 60.2
25 TraesCS3D01G059500 chr4D 74.658 292 49 12 399 667 632314 632025 4.540000e-19 106.0
26 TraesCS3D01G059500 chr4D 76.389 216 31 14 400 602 83281719 83281511 7.590000e-17 99.0
27 TraesCS3D01G059500 chr4D 82.667 75 11 2 672 745 8775765 8775692 7.700000e-07 65.8
28 TraesCS3D01G059500 chr5B 86.517 89 12 0 671 759 696483542 696483454 7.590000e-17 99.0
29 TraesCS3D01G059500 chr5B 74.021 281 49 15 399 667 326609676 326609944 3.530000e-15 93.5
30 TraesCS3D01G059500 chr4A 87.719 57 7 0 671 727 602287671 602287615 2.140000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G059500 chr3D 26116468 26119792 3324 True 6141.0 6141 100.000 1 3325 1 chr3D.!!$R1 3324
1 TraesCS3D01G059500 chr3B 43344632 43347450 2818 True 3459.0 3459 89.370 201 2939 1 chr3B.!!$R1 2738
2 TraesCS3D01G059500 chr3A 35963533 35966335 2802 True 1914.5 2425 91.088 218 3059 2 chr3A.!!$R2 2841

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
139 140 0.034896 AAATAGCGGTCGCCCTATGG 59.965 55.0 11.95 0.0 43.17 2.74 F
1380 1437 0.029167 GTCTCCTCGCTAAGGTACGC 59.971 60.0 2.31 0.0 46.32 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1450 1507 0.030235 CATGCATGGGATCGCAGTTG 59.970 55.0 19.4 12.99 42.37 3.16 R
3257 3364 0.033208 ACCAATGTATGTGGGCCAGG 60.033 55.0 6.4 4.20 40.75 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.911484 GAGGAGCACTCAAATACCCTG 58.089 52.381 0.00 0.00 45.85 4.45
21 22 1.065126 AGGAGCACTCAAATACCCTGC 60.065 52.381 0.00 0.00 0.00 4.85
22 23 1.383523 GAGCACTCAAATACCCTGCC 58.616 55.000 0.00 0.00 0.00 4.85
23 24 0.392998 AGCACTCAAATACCCTGCCG 60.393 55.000 0.00 0.00 0.00 5.69
24 25 0.676782 GCACTCAAATACCCTGCCGT 60.677 55.000 0.00 0.00 0.00 5.68
25 26 1.086696 CACTCAAATACCCTGCCGTG 58.913 55.000 0.00 0.00 0.00 4.94
26 27 0.690762 ACTCAAATACCCTGCCGTGT 59.309 50.000 0.00 0.00 0.00 4.49
27 28 1.086696 CTCAAATACCCTGCCGTGTG 58.913 55.000 0.00 0.00 0.00 3.82
28 29 0.687920 TCAAATACCCTGCCGTGTGA 59.312 50.000 0.00 0.00 0.00 3.58
29 30 0.802494 CAAATACCCTGCCGTGTGAC 59.198 55.000 0.00 0.00 0.00 3.67
30 31 0.672401 AAATACCCTGCCGTGTGACG 60.672 55.000 0.00 0.00 42.11 4.35
31 32 3.659089 ATACCCTGCCGTGTGACGC 62.659 63.158 0.00 0.00 40.91 5.19
35 36 4.988598 CTGCCGTGTGACGCCCTT 62.989 66.667 0.00 0.00 40.91 3.95
38 39 3.041940 CCGTGTGACGCCCTTGTC 61.042 66.667 0.00 0.00 40.91 3.18
39 40 3.403057 CGTGTGACGCCCTTGTCG 61.403 66.667 0.00 0.00 41.87 4.35
40 41 3.712881 GTGTGACGCCCTTGTCGC 61.713 66.667 0.74 0.74 46.86 5.19
48 49 3.499737 CCCTTGTCGCGCCACATC 61.500 66.667 9.11 0.00 0.00 3.06
49 50 3.853330 CCTTGTCGCGCCACATCG 61.853 66.667 9.11 3.34 0.00 3.84
57 58 3.501396 CGCCACATCGCTGGATTT 58.499 55.556 0.00 0.00 32.30 2.17
58 59 1.063006 CGCCACATCGCTGGATTTG 59.937 57.895 0.00 0.00 32.30 2.32
59 60 1.647545 CGCCACATCGCTGGATTTGT 61.648 55.000 0.00 0.00 32.30 2.83
60 61 0.527565 GCCACATCGCTGGATTTGTT 59.472 50.000 0.00 0.00 32.30 2.83
61 62 1.733389 GCCACATCGCTGGATTTGTTG 60.733 52.381 0.00 0.00 32.30 3.33
62 63 1.541147 CCACATCGCTGGATTTGTTGT 59.459 47.619 0.00 0.00 32.30 3.32
63 64 2.414559 CCACATCGCTGGATTTGTTGTC 60.415 50.000 0.00 0.00 32.30 3.18
64 65 2.485426 CACATCGCTGGATTTGTTGTCT 59.515 45.455 0.00 0.00 0.00 3.41
65 66 2.744202 ACATCGCTGGATTTGTTGTCTC 59.256 45.455 0.00 0.00 0.00 3.36
66 67 1.808411 TCGCTGGATTTGTTGTCTCC 58.192 50.000 0.00 0.00 0.00 3.71
67 68 0.804989 CGCTGGATTTGTTGTCTCCC 59.195 55.000 0.00 0.00 0.00 4.30
68 69 1.611673 CGCTGGATTTGTTGTCTCCCT 60.612 52.381 0.00 0.00 0.00 4.20
69 70 2.087646 GCTGGATTTGTTGTCTCCCTC 58.912 52.381 0.00 0.00 0.00 4.30
70 71 2.350522 CTGGATTTGTTGTCTCCCTCG 58.649 52.381 0.00 0.00 0.00 4.63
71 72 1.974957 TGGATTTGTTGTCTCCCTCGA 59.025 47.619 0.00 0.00 0.00 4.04
72 73 2.289444 TGGATTTGTTGTCTCCCTCGAC 60.289 50.000 0.00 0.00 34.52 4.20
73 74 1.993370 GATTTGTTGTCTCCCTCGACG 59.007 52.381 0.00 0.00 36.71 5.12
74 75 0.599204 TTTGTTGTCTCCCTCGACGC 60.599 55.000 0.00 0.00 36.71 5.19
75 76 1.461091 TTGTTGTCTCCCTCGACGCT 61.461 55.000 0.00 0.00 36.71 5.07
76 77 1.153997 GTTGTCTCCCTCGACGCTC 60.154 63.158 0.00 0.00 36.71 5.03
77 78 1.602605 TTGTCTCCCTCGACGCTCA 60.603 57.895 0.00 0.00 36.71 4.26
78 79 0.965866 TTGTCTCCCTCGACGCTCAT 60.966 55.000 0.00 0.00 36.71 2.90
79 80 1.357334 GTCTCCCTCGACGCTCATC 59.643 63.158 0.00 0.00 0.00 2.92
80 81 1.098712 GTCTCCCTCGACGCTCATCT 61.099 60.000 0.00 0.00 0.00 2.90
81 82 0.394488 TCTCCCTCGACGCTCATCTT 60.394 55.000 0.00 0.00 0.00 2.40
82 83 0.457851 CTCCCTCGACGCTCATCTTT 59.542 55.000 0.00 0.00 0.00 2.52
83 84 0.895530 TCCCTCGACGCTCATCTTTT 59.104 50.000 0.00 0.00 0.00 2.27
84 85 1.275291 TCCCTCGACGCTCATCTTTTT 59.725 47.619 0.00 0.00 0.00 1.94
100 101 2.761160 TTTTTCCTCCCCCTCGCC 59.239 61.111 0.00 0.00 0.00 5.54
101 102 3.262448 TTTTTCCTCCCCCTCGCCG 62.262 63.158 0.00 0.00 0.00 6.46
106 107 4.489771 CTCCCCCTCGCCGCAAAT 62.490 66.667 0.00 0.00 0.00 2.32
107 108 3.995506 CTCCCCCTCGCCGCAAATT 62.996 63.158 0.00 0.00 0.00 1.82
108 109 2.124487 CCCCCTCGCCGCAAATTA 60.124 61.111 0.00 0.00 0.00 1.40
109 110 2.478033 CCCCCTCGCCGCAAATTAC 61.478 63.158 0.00 0.00 0.00 1.89
110 111 2.478033 CCCCTCGCCGCAAATTACC 61.478 63.158 0.00 0.00 0.00 2.85
111 112 1.747367 CCCTCGCCGCAAATTACCA 60.747 57.895 0.00 0.00 0.00 3.25
112 113 1.714899 CCCTCGCCGCAAATTACCAG 61.715 60.000 0.00 0.00 0.00 4.00
113 114 0.742990 CCTCGCCGCAAATTACCAGA 60.743 55.000 0.00 0.00 0.00 3.86
114 115 0.652592 CTCGCCGCAAATTACCAGAG 59.347 55.000 0.00 0.00 0.00 3.35
115 116 1.062525 CGCCGCAAATTACCAGAGC 59.937 57.895 0.00 0.00 0.00 4.09
116 117 1.369091 CGCCGCAAATTACCAGAGCT 61.369 55.000 0.00 0.00 0.00 4.09
117 118 0.378610 GCCGCAAATTACCAGAGCTC 59.621 55.000 5.27 5.27 0.00 4.09
118 119 2.014068 GCCGCAAATTACCAGAGCTCT 61.014 52.381 11.45 11.45 0.00 4.09
119 120 1.936547 CCGCAAATTACCAGAGCTCTC 59.063 52.381 14.96 0.00 0.00 3.20
120 121 2.621338 CGCAAATTACCAGAGCTCTCA 58.379 47.619 14.96 0.00 0.00 3.27
121 122 3.002791 CGCAAATTACCAGAGCTCTCAA 58.997 45.455 14.96 8.81 0.00 3.02
122 123 3.436704 CGCAAATTACCAGAGCTCTCAAA 59.563 43.478 14.96 8.79 0.00 2.69
123 124 4.095483 CGCAAATTACCAGAGCTCTCAAAT 59.905 41.667 14.96 10.78 0.00 2.32
124 125 5.294306 CGCAAATTACCAGAGCTCTCAAATA 59.706 40.000 14.96 0.84 0.00 1.40
125 126 6.510799 CGCAAATTACCAGAGCTCTCAAATAG 60.511 42.308 14.96 10.61 0.00 1.73
126 127 6.723282 CAAATTACCAGAGCTCTCAAATAGC 58.277 40.000 14.96 0.00 40.40 2.97
127 128 2.593346 ACCAGAGCTCTCAAATAGCG 57.407 50.000 14.96 0.00 44.87 4.26
128 129 1.137872 ACCAGAGCTCTCAAATAGCGG 59.862 52.381 14.96 12.06 44.87 5.52
129 130 1.137872 CCAGAGCTCTCAAATAGCGGT 59.862 52.381 14.96 0.00 44.87 5.68
130 131 2.468831 CAGAGCTCTCAAATAGCGGTC 58.531 52.381 14.96 0.00 44.87 4.79
131 132 1.066303 AGAGCTCTCAAATAGCGGTCG 59.934 52.381 11.45 0.00 44.87 4.79
132 133 0.528684 AGCTCTCAAATAGCGGTCGC 60.529 55.000 7.32 7.32 44.87 5.19
133 134 1.491505 GCTCTCAAATAGCGGTCGCC 61.492 60.000 11.95 0.00 43.17 5.54
134 135 0.876342 CTCTCAAATAGCGGTCGCCC 60.876 60.000 11.95 0.00 43.17 6.13
135 136 1.144057 CTCAAATAGCGGTCGCCCT 59.856 57.895 11.95 0.00 43.17 5.19
136 137 0.387929 CTCAAATAGCGGTCGCCCTA 59.612 55.000 11.95 0.00 43.17 3.53
137 138 1.000955 CTCAAATAGCGGTCGCCCTAT 59.999 52.381 11.95 1.77 43.17 2.57
138 139 1.148310 CAAATAGCGGTCGCCCTATG 58.852 55.000 11.95 3.43 43.17 2.23
139 140 0.034896 AAATAGCGGTCGCCCTATGG 59.965 55.000 11.95 0.00 43.17 2.74
156 157 4.326766 GCTCGCCACGCAAGCAAA 62.327 61.111 0.00 0.00 45.62 3.68
157 158 2.427410 CTCGCCACGCAAGCAAAC 60.427 61.111 0.00 0.00 45.62 2.93
158 159 4.306471 TCGCCACGCAAGCAAACG 62.306 61.111 0.00 0.00 45.62 3.60
160 161 4.999939 GCCACGCAAGCAAACGGG 63.000 66.667 0.00 0.00 45.62 5.28
162 163 4.341502 CACGCAAGCAAACGGGGG 62.342 66.667 0.00 0.00 45.62 5.40
165 166 4.662961 GCAAGCAAACGGGGGCAC 62.663 66.667 0.00 0.00 0.00 5.01
184 185 3.689414 ACGACCCATGCGTGAGTA 58.311 55.556 7.72 0.00 40.94 2.59
185 186 1.511305 ACGACCCATGCGTGAGTAG 59.489 57.895 7.72 2.94 40.94 2.57
186 187 1.226974 CGACCCATGCGTGAGTAGG 60.227 63.158 7.72 2.14 0.00 3.18
187 188 1.521681 GACCCATGCGTGAGTAGGC 60.522 63.158 7.72 0.00 38.16 3.93
188 189 1.961180 GACCCATGCGTGAGTAGGCT 61.961 60.000 7.72 0.00 38.47 4.58
189 190 1.522355 CCCATGCGTGAGTAGGCTG 60.522 63.158 7.72 0.00 38.47 4.85
190 191 1.219124 CCATGCGTGAGTAGGCTGT 59.781 57.895 7.72 0.00 38.47 4.40
191 192 1.086067 CCATGCGTGAGTAGGCTGTG 61.086 60.000 7.72 0.00 38.47 3.66
192 193 1.448540 ATGCGTGAGTAGGCTGTGC 60.449 57.895 0.00 0.00 38.47 4.57
193 194 3.181967 GCGTGAGTAGGCTGTGCG 61.182 66.667 0.00 0.00 34.94 5.34
194 195 2.566529 CGTGAGTAGGCTGTGCGA 59.433 61.111 0.00 0.00 0.00 5.10
195 196 1.801913 CGTGAGTAGGCTGTGCGAC 60.802 63.158 0.00 0.00 0.00 5.19
196 197 1.446272 GTGAGTAGGCTGTGCGACC 60.446 63.158 0.00 0.00 0.00 4.79
197 198 1.906333 TGAGTAGGCTGTGCGACCA 60.906 57.895 0.00 0.00 0.00 4.02
198 199 1.257750 TGAGTAGGCTGTGCGACCAT 61.258 55.000 0.00 0.00 0.00 3.55
199 200 0.807667 GAGTAGGCTGTGCGACCATG 60.808 60.000 0.00 0.00 0.00 3.66
207 208 2.672651 TGCGACCATGGCAACCTG 60.673 61.111 13.04 0.00 37.49 4.00
295 305 9.495572 TTTTTCCAAAACACTCATGTAACTTTT 57.504 25.926 0.00 0.00 38.45 2.27
297 307 9.796120 TTTCCAAAACACTCATGTAACTTTTAG 57.204 29.630 0.00 0.00 38.45 1.85
307 317 8.995220 ACTCATGTAACTTTTAGTTTATCGCAA 58.005 29.630 0.00 0.00 39.51 4.85
369 379 8.135529 TCTGATGTACTATGTTTAACCGATCAG 58.864 37.037 0.00 0.00 36.15 2.90
374 384 9.926158 TGTACTATGTTTAACCGATCAGTAAAA 57.074 29.630 0.00 0.00 0.00 1.52
378 388 4.083908 TGTTTAACCGATCAGTAAAACCGC 60.084 41.667 0.00 0.00 0.00 5.68
390 400 1.029681 AAAACCGCCAAAGTCAGACC 58.970 50.000 0.00 0.00 0.00 3.85
394 404 0.390472 CCGCCAAAGTCAGACCTCTC 60.390 60.000 0.00 0.00 0.00 3.20
400 410 3.323403 CCAAAGTCAGACCTCTCAGTCTT 59.677 47.826 0.00 0.00 44.83 3.01
411 421 2.878406 CTCTCAGTCTTCGATCCTCCTC 59.122 54.545 0.00 0.00 0.00 3.71
452 462 2.365617 GTGCTCCGGATTAGATTCCTGA 59.634 50.000 3.57 0.00 33.30 3.86
454 464 2.365617 GCTCCGGATTAGATTCCTGACA 59.634 50.000 3.57 0.00 33.30 3.58
457 467 4.960938 TCCGGATTAGATTCCTGACATTG 58.039 43.478 0.00 0.00 33.30 2.82
463 473 2.731572 AGATTCCTGACATTGCCTTGG 58.268 47.619 0.00 0.00 0.00 3.61
469 479 0.187117 TGACATTGCCTTGGGGTGAA 59.813 50.000 0.00 0.00 34.45 3.18
473 483 1.969923 CATTGCCTTGGGGTGAAAAGA 59.030 47.619 0.00 0.00 34.45 2.52
525 536 4.026062 GCAAAATTTGGTGTCCGTTTCTTC 60.026 41.667 7.89 0.00 0.00 2.87
537 548 7.494625 GGTGTCCGTTTCTTCATATCTATTCAA 59.505 37.037 0.00 0.00 0.00 2.69
547 558 8.937835 TCTTCATATCTATTCAAGGGTTCATCA 58.062 33.333 0.00 0.00 0.00 3.07
563 574 2.826128 TCATCAGTGACGACTAAGGCTT 59.174 45.455 4.58 4.58 0.00 4.35
567 578 2.229062 CAGTGACGACTAAGGCTTCAGA 59.771 50.000 1.30 0.00 0.00 3.27
602 613 2.769893 GGGCATTTGCACAATGACTTT 58.230 42.857 19.93 0.00 45.57 2.66
604 615 3.555586 GGGCATTTGCACAATGACTTTCT 60.556 43.478 19.93 0.00 45.57 2.52
606 617 4.053295 GCATTTGCACAATGACTTTCTGT 58.947 39.130 19.34 0.00 41.59 3.41
611 622 3.561310 TGCACAATGACTTTCTGTCTGTC 59.439 43.478 0.00 0.00 45.54 3.51
621 632 4.038042 ACTTTCTGTCTGTCATCGACAAGA 59.962 41.667 0.00 0.00 42.26 3.02
628 639 2.606725 CTGTCATCGACAAGATCAAGCC 59.393 50.000 0.00 0.00 42.26 4.35
633 644 1.002430 TCGACAAGATCAAGCCAGCTT 59.998 47.619 0.00 0.00 36.60 3.74
637 648 0.326264 AAGATCAAGCCAGCTTCGGT 59.674 50.000 0.90 0.00 33.42 4.69
639 650 1.137872 AGATCAAGCCAGCTTCGGTAG 59.862 52.381 0.90 0.00 33.42 3.18
641 652 0.902984 TCAAGCCAGCTTCGGTAGGA 60.903 55.000 0.90 0.00 33.42 2.94
645 656 1.439644 CCAGCTTCGGTAGGAGAGC 59.560 63.158 0.00 0.00 0.00 4.09
657 668 3.567797 GAGAGCGGCGACAATGGC 61.568 66.667 12.98 0.00 0.00 4.40
703 735 5.305644 GGTGGTCTAGATACCTTGATGTGAT 59.694 44.000 17.41 0.00 40.44 3.06
741 773 7.982224 TGAGATGCTTTGTATTTCTGATGAAG 58.018 34.615 0.00 0.00 33.28 3.02
748 780 8.482429 GCTTTGTATTTCTGATGAAGTTTTGTG 58.518 33.333 0.00 0.00 33.28 3.33
757 789 8.713737 TCTGATGAAGTTTTGTGATAGATCTG 57.286 34.615 5.18 0.00 0.00 2.90
758 790 8.534496 TCTGATGAAGTTTTGTGATAGATCTGA 58.466 33.333 5.18 0.00 0.00 3.27
760 792 9.676861 TGATGAAGTTTTGTGATAGATCTGAAT 57.323 29.630 5.18 0.00 0.00 2.57
763 795 9.730705 TGAAGTTTTGTGATAGATCTGAATCTT 57.269 29.630 5.18 2.18 42.39 2.40
773 805 7.496920 TGATAGATCTGAATCTTTTTCGCACAT 59.503 33.333 5.18 0.00 42.39 3.21
831 883 0.183492 TGCCTGGAAACTGCAAGAGT 59.817 50.000 0.00 0.00 36.19 3.24
839 891 2.175878 AACTGCAAGAGTCTGCGAAT 57.824 45.000 0.00 0.00 45.74 3.34
857 909 4.497507 GCGAATGGTATAGGGAAAACTTGC 60.498 45.833 0.00 0.00 0.00 4.01
955 1008 0.821711 CAACCAAAACCCTCCTCGCA 60.822 55.000 0.00 0.00 0.00 5.10
1039 1093 4.964241 GCCGGGCCTCCTCCCTAT 62.964 72.222 8.12 0.00 44.30 2.57
1045 1099 0.178891 GGCCTCCTCCCTATCCATCA 60.179 60.000 0.00 0.00 0.00 3.07
1050 1104 1.716503 TCCTCCCTATCCATCATCCGA 59.283 52.381 0.00 0.00 0.00 4.55
1051 1105 2.106566 CCTCCCTATCCATCATCCGAG 58.893 57.143 0.00 0.00 0.00 4.63
1191 1245 1.669211 GCACTGGACTCTTACCGTCAC 60.669 57.143 0.00 0.00 33.11 3.67
1380 1437 0.029167 GTCTCCTCGCTAAGGTACGC 59.971 60.000 2.31 0.00 46.32 4.42
1381 1438 0.393402 TCTCCTCGCTAAGGTACGCA 60.393 55.000 2.31 0.00 46.32 5.24
1382 1439 0.248539 CTCCTCGCTAAGGTACGCAC 60.249 60.000 2.31 0.00 46.32 5.34
1383 1440 1.585521 CCTCGCTAAGGTACGCACG 60.586 63.158 0.00 0.00 40.67 5.34
1425 1482 2.151202 TCAGTTTCAAATCCACCGAGC 58.849 47.619 0.00 0.00 0.00 5.03
1426 1483 1.135972 CAGTTTCAAATCCACCGAGCG 60.136 52.381 0.00 0.00 0.00 5.03
1427 1484 0.168128 GTTTCAAATCCACCGAGCGG 59.832 55.000 7.48 7.48 42.03 5.52
1428 1485 1.582610 TTTCAAATCCACCGAGCGGC 61.583 55.000 9.14 0.00 39.32 6.53
1447 1504 3.075005 GGGACTCCGCCTGTGCTA 61.075 66.667 0.00 0.00 34.43 3.49
1448 1505 2.656069 GGGACTCCGCCTGTGCTAA 61.656 63.158 0.00 0.00 34.43 3.09
1449 1506 1.448013 GGACTCCGCCTGTGCTAAC 60.448 63.158 0.00 0.00 34.43 2.34
1450 1507 1.448013 GACTCCGCCTGTGCTAACC 60.448 63.158 0.00 0.00 34.43 2.85
1600 1690 4.566004 CTTGAGGATCCGAGTTGTTGTTA 58.434 43.478 5.98 0.00 0.00 2.41
1716 1814 9.636789 ATTACACTTACAAGAACTTTAAAGGGT 57.363 29.630 19.14 14.00 34.58 4.34
1760 1858 2.825836 GCCCTGCTTGGACGATGG 60.826 66.667 0.00 0.00 38.35 3.51
1791 1889 2.868583 CAATAACTCCTCATGCACCTCG 59.131 50.000 0.00 0.00 0.00 4.63
1815 1913 5.737349 GCATGAGGATGTAGAATCGTCTTCA 60.737 44.000 0.00 3.90 41.31 3.02
1953 2051 3.671433 GCTTCGCGTATCCCGACAATATA 60.671 47.826 5.77 0.00 39.56 0.86
2168 2270 3.452474 GTCGATCTCATGCAGTAAGCTT 58.548 45.455 3.48 3.48 45.94 3.74
2310 2412 1.202915 TGACCAAGCTGCAGGATTTCA 60.203 47.619 17.12 8.11 0.00 2.69
2350 2452 6.929049 TCCTCACCGTTCATATAATGTTCATC 59.071 38.462 0.00 0.00 0.00 2.92
2446 2548 0.246635 GCTCGGCCTACAGAAAGTCA 59.753 55.000 0.00 0.00 0.00 3.41
2536 2642 7.745620 ACTAAAGTTCCCAAGTGAGTTTATG 57.254 36.000 0.00 0.00 0.00 1.90
2727 2834 5.181433 GGAGTGAGAAAGACCCAAATTGTAC 59.819 44.000 0.00 0.00 0.00 2.90
2729 2836 7.074653 AGTGAGAAAGACCCAAATTGTACTA 57.925 36.000 0.00 0.00 0.00 1.82
2730 2837 7.690256 AGTGAGAAAGACCCAAATTGTACTAT 58.310 34.615 0.00 0.00 0.00 2.12
2731 2838 8.822805 AGTGAGAAAGACCCAAATTGTACTATA 58.177 33.333 0.00 0.00 0.00 1.31
2781 2888 3.054139 TCAGTGGAGCCATTTCTAATGCT 60.054 43.478 0.00 0.00 36.62 3.79
2782 2889 4.164030 TCAGTGGAGCCATTTCTAATGCTA 59.836 41.667 0.00 0.00 33.41 3.49
2843 2950 8.610248 TTTAGTTAATGTGTAGCAAGCAGTTA 57.390 30.769 0.00 0.00 0.00 2.24
2858 2965 6.972901 GCAAGCAGTTATATGTTTTTAGACCC 59.027 38.462 0.00 0.00 0.00 4.46
2868 2975 5.298989 TGTTTTTAGACCCAGAGCTAACA 57.701 39.130 0.00 0.00 0.00 2.41
2954 3061 0.603569 ACAGGACTAGTGAGGTTGCG 59.396 55.000 0.00 0.00 0.00 4.85
2956 3063 1.272490 CAGGACTAGTGAGGTTGCGAA 59.728 52.381 0.00 0.00 0.00 4.70
2977 3084 6.367422 GCGAATCTCACTAGCTTGCTAATTAT 59.633 38.462 0.00 0.00 0.00 1.28
3019 3126 6.209192 AGTGTATGGAAGATTTGATTGCAACA 59.791 34.615 0.00 0.00 31.49 3.33
3054 3161 9.586435 AAAGTAAGGAATTGAAAAGAGTGTTTG 57.414 29.630 0.00 0.00 0.00 2.93
3059 3166 7.880105 AGGAATTGAAAAGAGTGTTTGATCTC 58.120 34.615 0.00 0.00 0.00 2.75
3060 3167 7.503566 AGGAATTGAAAAGAGTGTTTGATCTCA 59.496 33.333 0.00 0.00 33.63 3.27
3061 3168 7.592903 GGAATTGAAAAGAGTGTTTGATCTCAC 59.407 37.037 0.00 1.43 33.63 3.51
3062 3169 7.814264 ATTGAAAAGAGTGTTTGATCTCACT 57.186 32.000 14.88 14.88 45.81 3.41
3063 3170 8.908786 ATTGAAAAGAGTGTTTGATCTCACTA 57.091 30.769 14.92 3.43 43.64 2.74
3064 3171 7.953158 TGAAAAGAGTGTTTGATCTCACTAG 57.047 36.000 14.92 0.00 43.64 2.57
3065 3172 7.500992 TGAAAAGAGTGTTTGATCTCACTAGT 58.499 34.615 14.92 0.00 43.64 2.57
3066 3173 8.638873 TGAAAAGAGTGTTTGATCTCACTAGTA 58.361 33.333 14.92 0.00 43.64 1.82
3067 3174 9.134734 GAAAAGAGTGTTTGATCTCACTAGTAG 57.865 37.037 14.92 0.00 43.64 2.57
3068 3175 8.410673 AAAGAGTGTTTGATCTCACTAGTAGA 57.589 34.615 3.59 0.00 43.64 2.59
3069 3176 8.410673 AAGAGTGTTTGATCTCACTAGTAGAA 57.589 34.615 3.59 0.00 43.64 2.10
3070 3177 8.410673 AGAGTGTTTGATCTCACTAGTAGAAA 57.589 34.615 3.59 0.00 43.64 2.52
3071 3178 8.861086 AGAGTGTTTGATCTCACTAGTAGAAAA 58.139 33.333 3.59 0.00 43.64 2.29
3072 3179 8.819643 AGTGTTTGATCTCACTAGTAGAAAAC 57.180 34.615 3.59 8.34 42.13 2.43
3073 3180 8.421784 AGTGTTTGATCTCACTAGTAGAAAACA 58.578 33.333 17.36 17.36 42.13 2.83
3074 3181 8.704234 GTGTTTGATCTCACTAGTAGAAAACAG 58.296 37.037 19.41 1.52 36.13 3.16
3075 3182 7.872993 TGTTTGATCTCACTAGTAGAAAACAGG 59.127 37.037 17.36 0.00 32.81 4.00
3076 3183 6.531503 TGATCTCACTAGTAGAAAACAGGG 57.468 41.667 3.59 0.00 0.00 4.45
3077 3184 4.803098 TCTCACTAGTAGAAAACAGGGC 57.197 45.455 3.59 0.00 0.00 5.19
3078 3185 4.417437 TCTCACTAGTAGAAAACAGGGCT 58.583 43.478 3.59 0.00 0.00 5.19
3079 3186 4.838986 TCTCACTAGTAGAAAACAGGGCTT 59.161 41.667 3.59 0.00 0.00 4.35
3080 3187 5.307196 TCTCACTAGTAGAAAACAGGGCTTT 59.693 40.000 3.59 0.00 0.00 3.51
3081 3188 5.305585 TCACTAGTAGAAAACAGGGCTTTG 58.694 41.667 3.59 0.00 0.00 2.77
3082 3189 4.455877 CACTAGTAGAAAACAGGGCTTTGG 59.544 45.833 3.59 0.00 0.00 3.28
3083 3190 3.595190 AGTAGAAAACAGGGCTTTGGT 57.405 42.857 0.00 0.00 0.00 3.67
3084 3191 3.910989 AGTAGAAAACAGGGCTTTGGTT 58.089 40.909 0.00 0.00 0.00 3.67
3085 3192 3.889538 AGTAGAAAACAGGGCTTTGGTTC 59.110 43.478 0.00 0.00 0.00 3.62
3086 3193 1.681264 AGAAAACAGGGCTTTGGTTCG 59.319 47.619 0.00 0.00 0.00 3.95
3087 3194 0.750249 AAAACAGGGCTTTGGTTCGG 59.250 50.000 0.00 0.00 0.00 4.30
3088 3195 1.112916 AAACAGGGCTTTGGTTCGGG 61.113 55.000 0.00 0.00 0.00 5.14
3089 3196 3.373565 CAGGGCTTTGGTTCGGGC 61.374 66.667 0.00 0.00 0.00 6.13
3090 3197 4.678743 AGGGCTTTGGTTCGGGCC 62.679 66.667 0.00 0.00 44.57 5.80
3091 3198 4.678743 GGGCTTTGGTTCGGGCCT 62.679 66.667 0.84 0.00 43.62 5.19
3092 3199 3.373565 GGCTTTGGTTCGGGCCTG 61.374 66.667 4.71 4.71 41.20 4.85
3093 3200 3.373565 GCTTTGGTTCGGGCCTGG 61.374 66.667 12.87 0.00 0.00 4.45
3094 3201 3.373565 CTTTGGTTCGGGCCTGGC 61.374 66.667 12.87 11.05 0.00 4.85
3105 3212 2.520260 GCCTGGCCAGCCCATTAG 60.520 66.667 28.39 12.86 44.33 1.73
3106 3213 3.010144 CCTGGCCAGCCCATTAGT 58.990 61.111 28.39 0.00 44.33 2.24
3107 3214 1.152881 CCTGGCCAGCCCATTAGTC 60.153 63.158 28.39 0.00 44.33 2.59
3108 3215 1.152881 CTGGCCAGCCCATTAGTCC 60.153 63.158 22.33 0.00 44.33 3.85
3109 3216 2.195956 GGCCAGCCCATTAGTCCC 59.804 66.667 0.00 0.00 0.00 4.46
3110 3217 2.203209 GCCAGCCCATTAGTCCCG 60.203 66.667 0.00 0.00 0.00 5.14
3111 3218 2.510906 CCAGCCCATTAGTCCCGG 59.489 66.667 0.00 0.00 0.00 5.73
3112 3219 2.375345 CCAGCCCATTAGTCCCGGT 61.375 63.158 0.00 0.00 0.00 5.28
3113 3220 1.607612 CAGCCCATTAGTCCCGGTT 59.392 57.895 0.00 0.00 0.00 4.44
3114 3221 0.463833 CAGCCCATTAGTCCCGGTTC 60.464 60.000 0.00 0.00 0.00 3.62
3115 3222 0.620700 AGCCCATTAGTCCCGGTTCT 60.621 55.000 0.00 0.15 0.00 3.01
3116 3223 0.463833 GCCCATTAGTCCCGGTTCTG 60.464 60.000 0.00 0.00 0.00 3.02
3117 3224 0.463833 CCCATTAGTCCCGGTTCTGC 60.464 60.000 0.00 0.00 0.00 4.26
3118 3225 0.251916 CCATTAGTCCCGGTTCTGCA 59.748 55.000 0.00 0.00 0.00 4.41
3119 3226 1.134098 CCATTAGTCCCGGTTCTGCAT 60.134 52.381 0.00 0.00 0.00 3.96
3120 3227 1.942657 CATTAGTCCCGGTTCTGCATG 59.057 52.381 0.00 2.30 0.00 4.06
3121 3228 1.271856 TTAGTCCCGGTTCTGCATGA 58.728 50.000 0.00 0.00 0.00 3.07
3122 3229 1.271856 TAGTCCCGGTTCTGCATGAA 58.728 50.000 0.00 0.00 0.00 2.57
3128 3235 4.713946 GTTCTGCATGAACCGGGA 57.286 55.556 6.32 0.00 46.89 5.14
3129 3236 2.171635 GTTCTGCATGAACCGGGAC 58.828 57.895 6.32 0.00 46.89 4.46
3130 3237 1.002624 TTCTGCATGAACCGGGACC 60.003 57.895 6.32 0.00 0.00 4.46
3131 3238 2.438434 CTGCATGAACCGGGACCC 60.438 66.667 6.32 0.00 0.00 4.46
3132 3239 3.253061 TGCATGAACCGGGACCCA 61.253 61.111 12.15 0.00 0.00 4.51
3133 3240 2.275418 GCATGAACCGGGACCCAT 59.725 61.111 12.15 0.00 0.00 4.00
3134 3241 2.120909 GCATGAACCGGGACCCATG 61.121 63.158 12.15 13.99 39.35 3.66
3135 3242 1.453745 CATGAACCGGGACCCATGG 60.454 63.158 12.15 4.14 34.39 3.66
3136 3243 2.689691 ATGAACCGGGACCCATGGG 61.690 63.158 30.23 30.23 42.03 4.00
3147 3254 2.519302 CCATGGGGGCATTCGTCC 60.519 66.667 2.85 0.00 35.48 4.79
3153 3260 2.822701 GGGCATTCGTCCCGGTTC 60.823 66.667 0.00 0.00 33.43 3.62
3154 3261 3.192922 GGCATTCGTCCCGGTTCG 61.193 66.667 0.00 4.79 0.00 3.95
3155 3262 2.433664 GCATTCGTCCCGGTTCGT 60.434 61.111 13.60 0.00 0.00 3.85
3156 3263 2.736682 GCATTCGTCCCGGTTCGTG 61.737 63.158 13.60 8.10 0.00 4.35
3157 3264 1.080366 CATTCGTCCCGGTTCGTGA 60.080 57.895 13.60 6.24 0.00 4.35
3158 3265 1.076533 CATTCGTCCCGGTTCGTGAG 61.077 60.000 13.60 3.53 0.00 3.51
3159 3266 2.830704 ATTCGTCCCGGTTCGTGAGC 62.831 60.000 13.60 0.00 0.00 4.26
3161 3268 4.754667 GTCCCGGTTCGTGAGCCC 62.755 72.222 0.00 0.00 0.00 5.19
3163 3270 4.760047 CCCGGTTCGTGAGCCCAG 62.760 72.222 0.00 0.00 0.00 4.45
3164 3271 4.760047 CCGGTTCGTGAGCCCAGG 62.760 72.222 0.00 0.00 0.00 4.45
3165 3272 4.760047 CGGTTCGTGAGCCCAGGG 62.760 72.222 0.00 0.00 0.00 4.45
3166 3273 4.410400 GGTTCGTGAGCCCAGGGG 62.410 72.222 7.91 3.48 38.57 4.79
3195 3302 2.438434 CCTCGTGGGCATTGGTCC 60.438 66.667 0.00 0.00 40.08 4.46
3196 3303 2.438434 CTCGTGGGCATTGGTCCC 60.438 66.667 0.00 0.00 44.17 4.46
3197 3304 4.402528 TCGTGGGCATTGGTCCCG 62.403 66.667 0.00 0.00 46.92 5.14
3199 3306 4.360405 GTGGGCATTGGTCCCGGT 62.360 66.667 0.00 0.00 46.92 5.28
3200 3307 3.585428 TGGGCATTGGTCCCGGTT 61.585 61.111 0.00 0.00 46.92 4.44
3201 3308 2.754254 GGGCATTGGTCCCGGTTC 60.754 66.667 0.00 0.00 33.43 3.62
3202 3309 3.131478 GGCATTGGTCCCGGTTCG 61.131 66.667 0.00 0.00 0.00 3.95
3203 3310 2.359478 GCATTGGTCCCGGTTCGT 60.359 61.111 0.00 0.00 0.00 3.85
3204 3311 2.396157 GCATTGGTCCCGGTTCGTC 61.396 63.158 0.00 0.00 0.00 4.20
3205 3312 1.295423 CATTGGTCCCGGTTCGTCT 59.705 57.895 0.00 0.00 0.00 4.18
3206 3313 1.019278 CATTGGTCCCGGTTCGTCTG 61.019 60.000 0.00 0.00 0.00 3.51
3207 3314 2.180159 ATTGGTCCCGGTTCGTCTGG 62.180 60.000 0.00 2.18 42.06 3.86
3208 3315 2.993264 GGTCCCGGTTCGTCTGGA 60.993 66.667 0.00 0.00 45.09 3.86
3209 3316 2.260743 GTCCCGGTTCGTCTGGAC 59.739 66.667 0.00 0.00 45.09 4.02
3210 3317 2.993264 TCCCGGTTCGTCTGGACC 60.993 66.667 0.00 0.00 45.09 4.46
3211 3318 4.078516 CCCGGTTCGTCTGGACCC 62.079 72.222 0.00 0.00 45.09 4.46
3212 3319 3.307906 CCGGTTCGTCTGGACCCA 61.308 66.667 0.00 0.00 45.09 4.51
3213 3320 2.656069 CCGGTTCGTCTGGACCCAT 61.656 63.158 0.00 0.00 45.09 4.00
3214 3321 1.295423 CGGTTCGTCTGGACCCATT 59.705 57.895 0.00 0.00 0.00 3.16
3215 3322 0.321298 CGGTTCGTCTGGACCCATTT 60.321 55.000 0.00 0.00 0.00 2.32
3216 3323 1.165270 GGTTCGTCTGGACCCATTTG 58.835 55.000 0.00 0.00 0.00 2.32
3217 3324 1.544759 GGTTCGTCTGGACCCATTTGT 60.545 52.381 0.00 0.00 0.00 2.83
3218 3325 1.804748 GTTCGTCTGGACCCATTTGTC 59.195 52.381 0.00 0.00 34.42 3.18
3224 3331 4.834911 GACCCATTTGTCCCGGTT 57.165 55.556 0.00 0.00 0.00 4.44
3225 3332 2.563297 GACCCATTTGTCCCGGTTC 58.437 57.895 0.00 0.00 0.00 3.62
3226 3333 0.037734 GACCCATTTGTCCCGGTTCT 59.962 55.000 0.00 0.00 0.00 3.01
3227 3334 1.279846 GACCCATTTGTCCCGGTTCTA 59.720 52.381 0.00 0.00 0.00 2.10
3228 3335 1.003928 ACCCATTTGTCCCGGTTCTAC 59.996 52.381 0.00 0.00 0.00 2.59
3229 3336 1.365699 CCATTTGTCCCGGTTCTACG 58.634 55.000 0.00 0.00 0.00 3.51
3230 3337 0.725117 CATTTGTCCCGGTTCTACGC 59.275 55.000 0.00 0.00 0.00 4.42
3231 3338 0.322322 ATTTGTCCCGGTTCTACGCA 59.678 50.000 0.00 0.00 0.00 5.24
3232 3339 0.322322 TTTGTCCCGGTTCTACGCAT 59.678 50.000 0.00 0.00 0.00 4.73
3233 3340 0.390603 TTGTCCCGGTTCTACGCATG 60.391 55.000 0.00 0.00 0.00 4.06
3234 3341 1.252215 TGTCCCGGTTCTACGCATGA 61.252 55.000 0.00 0.00 0.00 3.07
3235 3342 0.108520 GTCCCGGTTCTACGCATGAA 60.109 55.000 0.00 0.00 0.00 2.57
3236 3343 0.108520 TCCCGGTTCTACGCATGAAC 60.109 55.000 0.00 7.09 42.00 3.18
3240 3347 2.380081 GTTCTACGCATGAACCGGG 58.620 57.895 6.32 0.00 38.19 5.73
3241 3348 0.108520 GTTCTACGCATGAACCGGGA 60.109 55.000 6.32 0.00 38.19 5.14
3242 3349 0.108520 TTCTACGCATGAACCGGGAC 60.109 55.000 6.32 0.00 0.00 4.46
3243 3350 1.520787 CTACGCATGAACCGGGACC 60.521 63.158 6.32 0.00 0.00 4.46
3244 3351 2.233605 CTACGCATGAACCGGGACCA 62.234 60.000 6.32 0.00 0.00 4.02
3245 3352 1.828461 TACGCATGAACCGGGACCAA 61.828 55.000 6.32 0.00 0.00 3.67
3246 3353 1.748879 CGCATGAACCGGGACCAAT 60.749 57.895 6.32 0.00 0.00 3.16
3247 3354 1.809207 GCATGAACCGGGACCAATG 59.191 57.895 6.32 3.41 0.00 2.82
3248 3355 1.666209 GCATGAACCGGGACCAATGG 61.666 60.000 6.32 0.00 0.00 3.16
3249 3356 0.323360 CATGAACCGGGACCAATGGT 60.323 55.000 3.74 3.74 39.44 3.55
3257 3364 4.522971 GACCAATGGTCCTCGCTC 57.477 61.111 21.30 0.00 46.19 5.03
3258 3365 1.153349 GACCAATGGTCCTCGCTCC 60.153 63.158 21.30 0.00 46.19 4.70
3259 3366 1.613630 ACCAATGGTCCTCGCTCCT 60.614 57.895 0.00 0.00 0.00 3.69
3260 3367 1.153289 CCAATGGTCCTCGCTCCTG 60.153 63.158 0.00 0.00 0.00 3.86
3261 3368 1.153289 CAATGGTCCTCGCTCCTGG 60.153 63.158 0.00 0.00 0.00 4.45
3262 3369 3.036429 AATGGTCCTCGCTCCTGGC 62.036 63.158 0.00 0.00 37.64 4.85
3268 3375 3.790437 CTCGCTCCTGGCCCACAT 61.790 66.667 0.00 0.00 37.74 3.21
3269 3376 2.364973 TCGCTCCTGGCCCACATA 60.365 61.111 0.00 0.00 37.74 2.29
3270 3377 2.203070 CGCTCCTGGCCCACATAC 60.203 66.667 0.00 0.00 37.74 2.39
3271 3378 2.998097 GCTCCTGGCCCACATACA 59.002 61.111 0.00 0.00 34.27 2.29
3272 3379 1.533711 GCTCCTGGCCCACATACAT 59.466 57.895 0.00 0.00 34.27 2.29
3273 3380 0.106519 GCTCCTGGCCCACATACATT 60.107 55.000 0.00 0.00 34.27 2.71
3274 3381 1.683943 CTCCTGGCCCACATACATTG 58.316 55.000 0.00 0.00 0.00 2.82
3275 3382 0.258484 TCCTGGCCCACATACATTGG 59.742 55.000 0.00 0.00 0.00 3.16
3276 3383 0.033208 CCTGGCCCACATACATTGGT 60.033 55.000 0.00 0.00 31.46 3.67
3277 3384 1.392589 CTGGCCCACATACATTGGTC 58.607 55.000 0.00 0.00 31.46 4.02
3278 3385 0.033601 TGGCCCACATACATTGGTCC 60.034 55.000 0.00 0.00 31.46 4.46
3279 3386 0.755327 GGCCCACATACATTGGTCCC 60.755 60.000 0.00 0.00 31.46 4.46
3280 3387 1.101049 GCCCACATACATTGGTCCCG 61.101 60.000 0.00 0.00 31.46 5.14
3281 3388 0.465460 CCCACATACATTGGTCCCGG 60.465 60.000 0.00 0.00 31.46 5.73
3282 3389 0.254747 CCACATACATTGGTCCCGGT 59.745 55.000 0.00 0.00 0.00 5.28
3283 3390 1.340600 CCACATACATTGGTCCCGGTT 60.341 52.381 0.00 0.00 0.00 4.44
3284 3391 2.014128 CACATACATTGGTCCCGGTTC 58.986 52.381 0.00 0.00 0.00 3.62
3285 3392 1.295792 CATACATTGGTCCCGGTTCG 58.704 55.000 0.00 0.00 0.00 3.95
3286 3393 0.906775 ATACATTGGTCCCGGTTCGT 59.093 50.000 0.00 0.00 0.00 3.85
3287 3394 0.037139 TACATTGGTCCCGGTTCGTG 60.037 55.000 0.00 0.00 0.00 4.35
3288 3395 2.359478 ATTGGTCCCGGTTCGTGC 60.359 61.111 0.00 0.00 0.00 5.34
3289 3396 3.912745 ATTGGTCCCGGTTCGTGCC 62.913 63.158 0.00 0.00 0.00 5.01
3291 3398 3.384532 GGTCCCGGTTCGTGCCTA 61.385 66.667 0.00 0.00 0.00 3.93
3292 3399 2.183555 GTCCCGGTTCGTGCCTAG 59.816 66.667 0.00 0.00 0.00 3.02
3293 3400 2.036098 TCCCGGTTCGTGCCTAGA 59.964 61.111 0.00 0.00 0.00 2.43
3294 3401 1.607178 TCCCGGTTCGTGCCTAGAA 60.607 57.895 0.00 0.00 0.00 2.10
3295 3402 1.447314 CCCGGTTCGTGCCTAGAAC 60.447 63.158 0.00 7.30 45.16 3.01
3299 3406 3.139029 GTTCGTGCCTAGAACCAGG 57.861 57.895 0.00 0.00 41.38 4.45
3300 3407 0.606604 GTTCGTGCCTAGAACCAGGA 59.393 55.000 0.00 0.00 41.38 3.86
3301 3408 0.606604 TTCGTGCCTAGAACCAGGAC 59.393 55.000 0.00 0.00 38.00 3.85
3302 3409 0.541063 TCGTGCCTAGAACCAGGACA 60.541 55.000 0.00 0.00 38.00 4.02
3303 3410 0.108615 CGTGCCTAGAACCAGGACAG 60.109 60.000 0.00 0.00 38.00 3.51
3304 3411 1.267121 GTGCCTAGAACCAGGACAGA 58.733 55.000 0.00 0.00 38.00 3.41
3305 3412 1.623811 GTGCCTAGAACCAGGACAGAA 59.376 52.381 0.00 0.00 38.00 3.02
3306 3413 1.902508 TGCCTAGAACCAGGACAGAAG 59.097 52.381 0.00 0.00 38.00 2.85
3307 3414 1.208293 GCCTAGAACCAGGACAGAAGG 59.792 57.143 0.00 0.00 38.00 3.46
3308 3415 1.834263 CCTAGAACCAGGACAGAAGGG 59.166 57.143 0.00 0.00 38.00 3.95
3309 3416 1.834263 CTAGAACCAGGACAGAAGGGG 59.166 57.143 0.00 0.00 0.00 4.79
3310 3417 0.193574 AGAACCAGGACAGAAGGGGA 59.806 55.000 0.00 0.00 0.00 4.81
3311 3418 0.615850 GAACCAGGACAGAAGGGGAG 59.384 60.000 0.00 0.00 0.00 4.30
3312 3419 1.492993 AACCAGGACAGAAGGGGAGC 61.493 60.000 0.00 0.00 0.00 4.70
3313 3420 1.614824 CCAGGACAGAAGGGGAGCT 60.615 63.158 0.00 0.00 0.00 4.09
3314 3421 1.204113 CCAGGACAGAAGGGGAGCTT 61.204 60.000 0.00 0.00 0.00 3.74
3315 3422 0.695347 CAGGACAGAAGGGGAGCTTT 59.305 55.000 0.00 0.00 0.00 3.51
3316 3423 1.909302 CAGGACAGAAGGGGAGCTTTA 59.091 52.381 0.00 0.00 0.00 1.85
3317 3424 2.093235 CAGGACAGAAGGGGAGCTTTAG 60.093 54.545 0.00 0.00 0.00 1.85
3318 3425 1.909986 GGACAGAAGGGGAGCTTTAGT 59.090 52.381 0.00 0.00 0.00 2.24
3319 3426 2.093394 GGACAGAAGGGGAGCTTTAGTC 60.093 54.545 0.00 0.00 0.00 2.59
3320 3427 2.835156 GACAGAAGGGGAGCTTTAGTCT 59.165 50.000 0.00 0.00 0.00 3.24
3321 3428 2.835156 ACAGAAGGGGAGCTTTAGTCTC 59.165 50.000 0.00 0.00 0.00 3.36
3322 3429 2.104170 AGAAGGGGAGCTTTAGTCTCG 58.896 52.381 0.00 0.00 0.00 4.04
3323 3430 1.137282 GAAGGGGAGCTTTAGTCTCGG 59.863 57.143 0.00 0.00 0.00 4.63
3324 3431 0.041386 AGGGGAGCTTTAGTCTCGGT 59.959 55.000 0.00 0.00 0.00 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.911484 CAGGGTATTTGAGTGCTCCTC 58.089 52.381 0.00 0.00 40.89 3.71
1 2 1.065126 GCAGGGTATTTGAGTGCTCCT 60.065 52.381 0.00 0.00 0.00 3.69
2 3 1.383523 GCAGGGTATTTGAGTGCTCC 58.616 55.000 0.00 0.00 0.00 4.70
3 4 1.383523 GGCAGGGTATTTGAGTGCTC 58.616 55.000 0.00 0.00 34.46 4.26
4 5 0.392998 CGGCAGGGTATTTGAGTGCT 60.393 55.000 0.00 0.00 34.46 4.40
5 6 0.676782 ACGGCAGGGTATTTGAGTGC 60.677 55.000 0.00 0.00 0.00 4.40
6 7 1.086696 CACGGCAGGGTATTTGAGTG 58.913 55.000 0.00 0.00 0.00 3.51
7 8 0.690762 ACACGGCAGGGTATTTGAGT 59.309 50.000 0.00 0.00 27.92 3.41
8 9 1.086696 CACACGGCAGGGTATTTGAG 58.913 55.000 0.00 0.00 29.25 3.02
9 10 0.687920 TCACACGGCAGGGTATTTGA 59.312 50.000 0.00 0.00 29.25 2.69
10 11 0.802494 GTCACACGGCAGGGTATTTG 59.198 55.000 0.00 0.00 29.25 2.32
11 12 0.672401 CGTCACACGGCAGGGTATTT 60.672 55.000 0.00 0.00 38.08 1.40
12 13 1.079405 CGTCACACGGCAGGGTATT 60.079 57.895 0.00 0.00 38.08 1.89
13 14 2.577059 CGTCACACGGCAGGGTAT 59.423 61.111 0.00 0.00 38.08 2.73
14 15 4.367023 GCGTCACACGGCAGGGTA 62.367 66.667 0.00 0.00 42.82 3.69
21 22 3.041940 GACAAGGGCGTCACACGG 61.042 66.667 0.00 0.00 42.82 4.94
22 23 3.403057 CGACAAGGGCGTCACACG 61.403 66.667 0.00 0.00 45.88 4.49
23 24 3.712881 GCGACAAGGGCGTCACAC 61.713 66.667 0.00 0.00 35.54 3.82
31 32 3.499737 GATGTGGCGCGACAAGGG 61.500 66.667 28.86 0.00 0.00 3.95
32 33 3.853330 CGATGTGGCGCGACAAGG 61.853 66.667 28.86 18.87 0.00 3.61
40 41 1.063006 CAAATCCAGCGATGTGGCG 59.937 57.895 0.00 0.00 37.53 5.69
41 42 0.527565 AACAAATCCAGCGATGTGGC 59.472 50.000 0.00 0.00 37.96 5.01
42 43 1.541147 ACAACAAATCCAGCGATGTGG 59.459 47.619 0.00 0.00 37.96 4.17
43 44 2.485426 AGACAACAAATCCAGCGATGTG 59.515 45.455 0.00 0.00 39.36 3.21
44 45 2.744202 GAGACAACAAATCCAGCGATGT 59.256 45.455 0.00 0.00 0.00 3.06
45 46 2.096496 GGAGACAACAAATCCAGCGATG 59.904 50.000 0.00 0.00 33.08 3.84
46 47 2.359900 GGAGACAACAAATCCAGCGAT 58.640 47.619 0.00 0.00 33.08 4.58
47 48 1.610624 GGGAGACAACAAATCCAGCGA 60.611 52.381 0.00 0.00 34.62 4.93
48 49 0.804989 GGGAGACAACAAATCCAGCG 59.195 55.000 0.00 0.00 34.62 5.18
49 50 2.087646 GAGGGAGACAACAAATCCAGC 58.912 52.381 0.00 0.00 34.62 4.85
50 51 2.028112 TCGAGGGAGACAACAAATCCAG 60.028 50.000 0.00 0.00 34.62 3.86
51 52 1.974957 TCGAGGGAGACAACAAATCCA 59.025 47.619 0.00 0.00 34.62 3.41
52 53 2.347731 GTCGAGGGAGACAACAAATCC 58.652 52.381 0.00 0.00 40.65 3.01
53 54 1.993370 CGTCGAGGGAGACAACAAATC 59.007 52.381 0.00 0.00 40.98 2.17
54 55 1.939838 GCGTCGAGGGAGACAACAAAT 60.940 52.381 7.31 0.00 40.98 2.32
55 56 0.599204 GCGTCGAGGGAGACAACAAA 60.599 55.000 7.31 0.00 40.98 2.83
56 57 1.006571 GCGTCGAGGGAGACAACAA 60.007 57.895 7.31 0.00 40.98 2.83
57 58 1.863662 GAGCGTCGAGGGAGACAACA 61.864 60.000 7.31 0.00 40.98 3.33
58 59 1.153997 GAGCGTCGAGGGAGACAAC 60.154 63.158 7.31 0.00 40.98 3.32
59 60 0.965866 ATGAGCGTCGAGGGAGACAA 60.966 55.000 7.31 0.00 40.98 3.18
60 61 1.377366 GATGAGCGTCGAGGGAGACA 61.377 60.000 7.31 0.00 40.98 3.41
61 62 1.098712 AGATGAGCGTCGAGGGAGAC 61.099 60.000 7.31 0.00 37.76 3.36
62 63 0.394488 AAGATGAGCGTCGAGGGAGA 60.394 55.000 7.31 0.00 0.00 3.71
63 64 0.457851 AAAGATGAGCGTCGAGGGAG 59.542 55.000 7.31 0.00 0.00 4.30
64 65 0.895530 AAAAGATGAGCGTCGAGGGA 59.104 50.000 7.31 0.00 0.00 4.20
65 66 1.726853 AAAAAGATGAGCGTCGAGGG 58.273 50.000 7.31 0.00 0.00 4.30
83 84 2.761160 GGCGAGGGGGAGGAAAAA 59.239 61.111 0.00 0.00 0.00 1.94
84 85 3.712907 CGGCGAGGGGGAGGAAAA 61.713 66.667 0.00 0.00 0.00 2.29
89 90 2.602746 TAATTTGCGGCGAGGGGGAG 62.603 60.000 12.98 0.00 0.00 4.30
90 91 2.671164 TAATTTGCGGCGAGGGGGA 61.671 57.895 12.98 0.00 0.00 4.81
91 92 2.124487 TAATTTGCGGCGAGGGGG 60.124 61.111 12.98 0.00 0.00 5.40
92 93 2.478033 GGTAATTTGCGGCGAGGGG 61.478 63.158 12.98 0.00 0.00 4.79
93 94 1.714899 CTGGTAATTTGCGGCGAGGG 61.715 60.000 12.98 0.00 0.00 4.30
94 95 0.742990 TCTGGTAATTTGCGGCGAGG 60.743 55.000 12.98 0.00 0.00 4.63
95 96 0.652592 CTCTGGTAATTTGCGGCGAG 59.347 55.000 12.98 0.00 0.00 5.03
96 97 1.366111 GCTCTGGTAATTTGCGGCGA 61.366 55.000 12.98 0.00 0.00 5.54
97 98 1.062525 GCTCTGGTAATTTGCGGCG 59.937 57.895 0.51 0.51 0.00 6.46
98 99 0.378610 GAGCTCTGGTAATTTGCGGC 59.621 55.000 6.43 0.00 0.00 6.53
99 100 1.936547 GAGAGCTCTGGTAATTTGCGG 59.063 52.381 23.91 0.00 0.00 5.69
100 101 2.621338 TGAGAGCTCTGGTAATTTGCG 58.379 47.619 23.91 0.00 0.00 4.85
101 102 5.573337 ATTTGAGAGCTCTGGTAATTTGC 57.427 39.130 23.91 3.41 0.00 3.68
102 103 6.510799 CGCTATTTGAGAGCTCTGGTAATTTG 60.511 42.308 23.91 13.31 37.81 2.32
103 104 5.525378 CGCTATTTGAGAGCTCTGGTAATTT 59.475 40.000 23.91 6.99 37.81 1.82
104 105 5.053145 CGCTATTTGAGAGCTCTGGTAATT 58.947 41.667 23.91 11.75 37.81 1.40
105 106 4.502259 CCGCTATTTGAGAGCTCTGGTAAT 60.502 45.833 23.91 18.19 37.81 1.89
106 107 3.181475 CCGCTATTTGAGAGCTCTGGTAA 60.181 47.826 23.91 12.32 37.81 2.85
107 108 2.362397 CCGCTATTTGAGAGCTCTGGTA 59.638 50.000 23.91 5.81 37.81 3.25
108 109 1.137872 CCGCTATTTGAGAGCTCTGGT 59.862 52.381 23.91 6.48 37.81 4.00
109 110 1.137872 ACCGCTATTTGAGAGCTCTGG 59.862 52.381 23.91 15.73 37.81 3.86
110 111 2.468831 GACCGCTATTTGAGAGCTCTG 58.531 52.381 23.91 6.54 37.81 3.35
111 112 1.066303 CGACCGCTATTTGAGAGCTCT 59.934 52.381 18.28 18.28 37.81 4.09
112 113 1.482278 CGACCGCTATTTGAGAGCTC 58.518 55.000 5.27 5.27 37.81 4.09
113 114 0.528684 GCGACCGCTATTTGAGAGCT 60.529 55.000 7.19 0.00 37.81 4.09
114 115 1.491505 GGCGACCGCTATTTGAGAGC 61.492 60.000 14.25 0.00 41.60 4.09
115 116 0.876342 GGGCGACCGCTATTTGAGAG 60.876 60.000 14.25 0.00 43.64 3.20
116 117 1.143183 GGGCGACCGCTATTTGAGA 59.857 57.895 14.25 0.00 43.64 3.27
117 118 3.719214 GGGCGACCGCTATTTGAG 58.281 61.111 14.25 0.00 43.64 3.02
140 141 2.427410 GTTTGCTTGCGTGGCGAG 60.427 61.111 0.40 0.40 42.54 5.03
141 142 4.306471 CGTTTGCTTGCGTGGCGA 62.306 61.111 0.00 0.00 0.00 5.54
143 144 4.999939 CCCGTTTGCTTGCGTGGC 63.000 66.667 0.00 0.00 0.00 5.01
144 145 4.341502 CCCCGTTTGCTTGCGTGG 62.342 66.667 0.00 0.00 0.00 4.94
145 146 4.341502 CCCCCGTTTGCTTGCGTG 62.342 66.667 0.00 0.00 0.00 5.34
148 149 4.662961 GTGCCCCCGTTTGCTTGC 62.663 66.667 0.00 0.00 0.00 4.01
149 150 3.989787 GGTGCCCCCGTTTGCTTG 61.990 66.667 0.00 0.00 0.00 4.01
150 151 4.531426 TGGTGCCCCCGTTTGCTT 62.531 61.111 0.00 0.00 35.15 3.91
153 154 4.939368 TCGTGGTGCCCCCGTTTG 62.939 66.667 0.00 0.00 35.15 2.93
154 155 4.941309 GTCGTGGTGCCCCCGTTT 62.941 66.667 0.00 0.00 35.15 3.60
167 168 1.511305 CTACTCACGCATGGGTCGT 59.489 57.895 13.22 14.72 39.47 4.34
168 169 1.226974 CCTACTCACGCATGGGTCG 60.227 63.158 13.22 9.57 39.47 4.79
169 170 1.521681 GCCTACTCACGCATGGGTC 60.522 63.158 13.22 0.00 39.47 4.46
170 171 1.990060 AGCCTACTCACGCATGGGT 60.990 57.895 10.03 10.03 43.97 4.51
171 172 1.522355 CAGCCTACTCACGCATGGG 60.522 63.158 8.44 8.44 0.00 4.00
172 173 1.086067 CACAGCCTACTCACGCATGG 61.086 60.000 0.00 0.00 0.00 3.66
173 174 1.699656 GCACAGCCTACTCACGCATG 61.700 60.000 0.00 0.00 0.00 4.06
174 175 1.448540 GCACAGCCTACTCACGCAT 60.449 57.895 0.00 0.00 0.00 4.73
175 176 2.048222 GCACAGCCTACTCACGCA 60.048 61.111 0.00 0.00 0.00 5.24
176 177 3.181967 CGCACAGCCTACTCACGC 61.182 66.667 0.00 0.00 0.00 5.34
177 178 1.801913 GTCGCACAGCCTACTCACG 60.802 63.158 0.00 0.00 0.00 4.35
178 179 1.446272 GGTCGCACAGCCTACTCAC 60.446 63.158 0.00 0.00 0.00 3.51
179 180 1.257750 ATGGTCGCACAGCCTACTCA 61.258 55.000 0.00 0.00 0.00 3.41
180 181 0.807667 CATGGTCGCACAGCCTACTC 60.808 60.000 0.00 0.00 0.00 2.59
181 182 1.219124 CATGGTCGCACAGCCTACT 59.781 57.895 0.00 0.00 0.00 2.57
182 183 1.815421 CCATGGTCGCACAGCCTAC 60.815 63.158 2.57 0.00 0.00 3.18
183 184 2.584064 CCATGGTCGCACAGCCTA 59.416 61.111 2.57 0.00 0.00 3.93
186 187 3.364441 TTGCCATGGTCGCACAGC 61.364 61.111 14.67 0.00 35.56 4.40
187 188 2.562912 GTTGCCATGGTCGCACAG 59.437 61.111 14.67 0.00 35.56 3.66
188 189 2.983030 GGTTGCCATGGTCGCACA 60.983 61.111 14.67 0.00 35.56 4.57
189 190 2.672996 AGGTTGCCATGGTCGCAC 60.673 61.111 14.67 4.97 35.56 5.34
190 191 2.672651 CAGGTTGCCATGGTCGCA 60.673 61.111 14.67 1.77 0.00 5.10
191 192 3.443045 CCAGGTTGCCATGGTCGC 61.443 66.667 14.67 3.31 0.00 5.19
192 193 2.751436 CCCAGGTTGCCATGGTCG 60.751 66.667 14.67 0.00 34.58 4.79
193 194 3.070576 GCCCAGGTTGCCATGGTC 61.071 66.667 14.67 6.41 34.58 4.02
194 195 3.913445 TGCCCAGGTTGCCATGGT 61.913 61.111 14.67 0.00 34.58 3.55
195 196 3.384532 GTGCCCAGGTTGCCATGG 61.385 66.667 7.63 7.63 36.27 3.66
196 197 3.384532 GGTGCCCAGGTTGCCATG 61.385 66.667 0.00 0.00 0.00 3.66
207 208 3.443045 CAACATCCAGCGGTGCCC 61.443 66.667 9.63 0.00 0.00 5.36
208 209 4.120331 GCAACATCCAGCGGTGCC 62.120 66.667 9.63 0.00 0.00 5.01
213 214 2.176546 CGGTTGCAACATCCAGCG 59.823 61.111 29.55 18.71 0.00 5.18
214 215 2.268076 ACCGGTTGCAACATCCAGC 61.268 57.895 29.55 11.15 0.00 4.85
215 216 1.580942 CACCGGTTGCAACATCCAG 59.419 57.895 29.55 15.21 0.00 3.86
216 217 1.900981 CCACCGGTTGCAACATCCA 60.901 57.895 29.55 0.00 0.00 3.41
274 284 9.581099 AAACTAAAAGTTACATGAGTGTTTTGG 57.419 29.630 0.00 5.03 37.47 3.28
280 290 8.440059 TGCGATAAACTAAAAGTTACATGAGTG 58.560 33.333 0.00 0.00 37.47 3.51
294 304 9.562583 GAACACCAAATATTTGCGATAAACTAA 57.437 29.630 20.67 0.00 36.86 2.24
295 305 8.731605 TGAACACCAAATATTTGCGATAAACTA 58.268 29.630 20.67 1.17 36.86 2.24
297 307 7.804614 TGAACACCAAATATTTGCGATAAAC 57.195 32.000 20.67 9.72 36.86 2.01
369 379 2.031420 GGTCTGACTTTGGCGGTTTTAC 60.031 50.000 7.85 0.00 0.00 2.01
374 384 1.122019 AGAGGTCTGACTTTGGCGGT 61.122 55.000 7.85 0.00 0.00 5.68
378 388 2.896685 AGACTGAGAGGTCTGACTTTGG 59.103 50.000 7.85 0.00 43.89 3.28
390 400 2.878406 GAGGAGGATCGAAGACTGAGAG 59.122 54.545 0.00 0.00 42.51 3.20
431 441 2.365617 TCAGGAATCTAATCCGGAGCAC 59.634 50.000 11.34 0.00 44.60 4.40
437 447 3.499918 GGCAATGTCAGGAATCTAATCCG 59.500 47.826 0.00 0.00 44.60 4.18
438 448 4.723309 AGGCAATGTCAGGAATCTAATCC 58.277 43.478 0.00 0.00 39.96 3.01
452 462 1.693606 CTTTTCACCCCAAGGCAATGT 59.306 47.619 0.00 0.00 36.11 2.71
454 464 2.397044 TCTTTTCACCCCAAGGCAAT 57.603 45.000 0.00 0.00 36.11 3.56
457 467 2.760650 CCTAATCTTTTCACCCCAAGGC 59.239 50.000 0.00 0.00 36.11 4.35
463 473 6.169557 ACAAAAACCCTAATCTTTTCACCC 57.830 37.500 0.00 0.00 0.00 4.61
469 479 4.339814 TGCACGACAAAAACCCTAATCTTT 59.660 37.500 0.00 0.00 0.00 2.52
473 483 3.613910 GCATGCACGACAAAAACCCTAAT 60.614 43.478 14.21 0.00 0.00 1.73
501 512 3.132111 AGAAACGGACACCAAATTTTGCT 59.868 39.130 3.50 0.00 0.00 3.91
502 513 3.453424 AGAAACGGACACCAAATTTTGC 58.547 40.909 3.50 0.00 0.00 3.68
504 515 5.331876 TGAAGAAACGGACACCAAATTTT 57.668 34.783 0.00 0.00 0.00 1.82
506 517 6.659242 AGATATGAAGAAACGGACACCAAATT 59.341 34.615 0.00 0.00 0.00 1.82
517 528 8.438676 AACCCTTGAATAGATATGAAGAAACG 57.561 34.615 0.00 0.00 0.00 3.60
525 536 8.152898 TCACTGATGAACCCTTGAATAGATATG 58.847 37.037 0.00 0.00 0.00 1.78
537 548 1.633774 AGTCGTCACTGATGAACCCT 58.366 50.000 2.34 0.00 36.31 4.34
547 558 2.490115 CTCTGAAGCCTTAGTCGTCACT 59.510 50.000 0.00 0.00 36.55 3.41
563 574 1.839994 CCCTAAGGACCAATGCTCTGA 59.160 52.381 0.00 0.00 33.47 3.27
567 578 1.214305 TGCCCCTAAGGACCAATGCT 61.214 55.000 0.00 0.00 38.24 3.79
569 580 2.431782 CAAATGCCCCTAAGGACCAATG 59.568 50.000 0.00 0.00 38.24 2.82
570 581 2.750814 CAAATGCCCCTAAGGACCAAT 58.249 47.619 0.00 0.00 38.24 3.16
571 582 1.894978 GCAAATGCCCCTAAGGACCAA 60.895 52.381 0.00 0.00 38.24 3.67
604 615 4.488879 CTTGATCTTGTCGATGACAGACA 58.511 43.478 0.00 0.00 43.69 3.41
606 617 3.515630 GCTTGATCTTGTCGATGACAGA 58.484 45.455 0.00 1.55 43.69 3.41
611 622 1.329906 GCTGGCTTGATCTTGTCGATG 59.670 52.381 0.00 0.00 30.84 3.84
621 632 0.179000 CCTACCGAAGCTGGCTTGAT 59.821 55.000 12.79 0.84 36.26 2.57
628 639 1.064946 CGCTCTCCTACCGAAGCTG 59.935 63.158 0.00 0.00 0.00 4.24
633 644 4.478371 TCGCCGCTCTCCTACCGA 62.478 66.667 0.00 0.00 0.00 4.69
637 648 1.437573 CATTGTCGCCGCTCTCCTA 59.562 57.895 0.00 0.00 0.00 2.94
639 650 2.892425 CCATTGTCGCCGCTCTCC 60.892 66.667 0.00 0.00 0.00 3.71
645 656 4.147322 GACACGCCATTGTCGCCG 62.147 66.667 0.00 0.00 36.79 6.46
657 668 2.503375 GACCACTACGCCGACACG 60.503 66.667 0.00 0.00 39.50 4.49
710 742 9.230122 TCAGAAATACAAAGCATCTCAAACATA 57.770 29.630 0.00 0.00 0.00 2.29
719 751 8.976986 AAACTTCATCAGAAATACAAAGCATC 57.023 30.769 0.00 0.00 32.35 3.91
720 752 9.199982 CAAAACTTCATCAGAAATACAAAGCAT 57.800 29.630 0.00 0.00 32.35 3.79
748 780 7.239166 TGTGCGAAAAAGATTCAGATCTATC 57.761 36.000 0.00 0.00 41.78 2.08
831 883 4.163458 AGTTTTCCCTATACCATTCGCAGA 59.837 41.667 0.00 0.00 0.00 4.26
839 891 4.919774 TGAGCAAGTTTTCCCTATACCA 57.080 40.909 0.00 0.00 0.00 3.25
857 909 7.220599 TGCTGAAAAAGAAAACGAATTTGAG 57.779 32.000 0.00 0.00 0.00 3.02
960 1013 7.785028 AGGGTTTTTCTTCCAGATTTTAAGAGT 59.215 33.333 0.00 0.00 31.30 3.24
969 1023 5.073428 GTGAAGAGGGTTTTTCTTCCAGAT 58.927 41.667 11.27 0.00 46.35 2.90
1039 1093 2.849162 GGCCCCTCGGATGATGGA 60.849 66.667 0.00 0.00 32.00 3.41
1051 1105 4.475135 GAGAAGCGTGGAGGCCCC 62.475 72.222 0.00 0.03 0.00 5.80
1091 1145 3.781770 GAGCTCCACCTGATCGCCG 62.782 68.421 0.87 0.00 0.00 6.46
1097 1151 1.679305 GAGGACGAGCTCCACCTGA 60.679 63.158 24.84 0.00 42.46 3.86
1191 1245 3.633094 CTCCTCGGTCACGGTGCTG 62.633 68.421 2.51 4.28 41.39 4.41
1380 1437 1.535636 GAGATCGATCTGCGTGCGTG 61.536 60.000 31.88 0.00 41.80 5.34
1381 1438 1.298713 GAGATCGATCTGCGTGCGT 60.299 57.895 31.88 5.91 41.80 5.24
1382 1439 0.593518 AAGAGATCGATCTGCGTGCG 60.594 55.000 31.88 0.00 41.80 5.34
1383 1440 1.565305 AAAGAGATCGATCTGCGTGC 58.435 50.000 31.88 16.80 41.80 5.34
1447 1504 1.315257 GCATGGGATCGCAGTTGGTT 61.315 55.000 18.10 0.00 0.00 3.67
1448 1505 1.750399 GCATGGGATCGCAGTTGGT 60.750 57.895 18.10 0.00 0.00 3.67
1449 1506 1.105167 ATGCATGGGATCGCAGTTGG 61.105 55.000 18.10 8.54 42.37 3.77
1450 1507 0.030235 CATGCATGGGATCGCAGTTG 59.970 55.000 19.40 12.99 42.37 3.16
1475 1538 4.080299 ACAGTCCCAATCTATCCCAACTTC 60.080 45.833 0.00 0.00 0.00 3.01
1478 1541 3.933861 ACAGTCCCAATCTATCCCAAC 57.066 47.619 0.00 0.00 0.00 3.77
1600 1690 6.152661 TCAAGATACGAAAAATTTGAGGGCAT 59.847 34.615 0.00 0.00 0.00 4.40
1716 1814 2.106338 TGCCACAACCTCAATCTTCTCA 59.894 45.455 0.00 0.00 0.00 3.27
1758 1856 0.241749 AGTTATTGTCGTCGTCGCCA 59.758 50.000 0.00 0.00 36.96 5.69
1760 1858 0.912528 GGAGTTATTGTCGTCGTCGC 59.087 55.000 0.00 0.00 36.96 5.19
1770 1868 2.868583 CGAGGTGCATGAGGAGTTATTG 59.131 50.000 0.00 0.00 0.00 1.90
1773 1871 0.175760 GCGAGGTGCATGAGGAGTTA 59.824 55.000 0.00 0.00 45.45 2.24
1791 1889 4.250116 AGACGATTCTACATCCTCATGC 57.750 45.455 0.00 0.00 32.57 4.06
1815 1913 0.099082 GATTCTCGTTCGAGGACGCT 59.901 55.000 19.65 0.00 42.50 5.07
2047 2145 6.712547 AGTGTTGCCAATTAATCTATCTAGGC 59.287 38.462 0.00 0.00 41.15 3.93
2055 2153 6.482973 CACCAAAAAGTGTTGCCAATTAATCT 59.517 34.615 0.00 0.00 32.89 2.40
2123 2221 7.710896 ACGGAGAGTAGTTAATTAATAAGCGT 58.289 34.615 0.31 0.00 0.00 5.07
2168 2270 2.700371 TGACTTCTGCAGGTTCTCTTCA 59.300 45.455 15.13 4.60 0.00 3.02
2171 2273 3.616076 CGAATGACTTCTGCAGGTTCTCT 60.616 47.826 15.13 0.00 0.00 3.10
2350 2452 6.318144 AGTCATAAGATCATGTTGCCTTTCTG 59.682 38.462 0.00 0.00 0.00 3.02
2446 2548 7.996066 ACAAAGCACCCTAATTAAAATGGTTTT 59.004 29.630 13.09 0.00 36.06 2.43
2515 2621 7.839680 ATTCATAAACTCACTTGGGAACTTT 57.160 32.000 0.00 0.00 0.00 2.66
2516 2622 7.839680 AATTCATAAACTCACTTGGGAACTT 57.160 32.000 0.00 0.00 0.00 2.66
2536 2642 6.694411 GCTGGACATCACACATGATTAAATTC 59.306 38.462 0.00 0.00 43.40 2.17
2727 2834 7.601886 AGGAATTTCTTGCTCGACATGATATAG 59.398 37.037 0.00 0.00 32.89 1.31
2729 2836 6.294473 AGGAATTTCTTGCTCGACATGATAT 58.706 36.000 0.00 4.06 32.89 1.63
2730 2837 5.674525 AGGAATTTCTTGCTCGACATGATA 58.325 37.500 0.00 2.43 32.89 2.15
2731 2838 4.521146 AGGAATTTCTTGCTCGACATGAT 58.479 39.130 0.00 0.00 32.89 2.45
2843 2950 7.630082 TGTTAGCTCTGGGTCTAAAAACATAT 58.370 34.615 0.00 0.00 0.00 1.78
2923 3030 2.852075 TCCTGTCGGGGGCAAAGT 60.852 61.111 0.00 0.00 35.33 2.66
2956 3063 9.094578 TCCTTATAATTAGCAAGCTAGTGAGAT 57.905 33.333 1.68 0.00 0.00 2.75
2977 3084 9.575868 TCCATACACTTGTGTTTTTAATCCTTA 57.424 29.630 11.80 0.00 0.00 2.69
3049 3156 7.872993 CCTGTTTTCTACTAGTGAGATCAAACA 59.127 37.037 18.65 18.65 0.00 2.83
3050 3157 7.332182 CCCTGTTTTCTACTAGTGAGATCAAAC 59.668 40.741 5.39 12.05 0.00 2.93
3054 3161 5.128008 AGCCCTGTTTTCTACTAGTGAGATC 59.872 44.000 5.39 0.00 0.00 2.75
3059 3166 4.455877 CCAAAGCCCTGTTTTCTACTAGTG 59.544 45.833 5.39 0.00 0.00 2.74
3060 3167 4.104261 ACCAAAGCCCTGTTTTCTACTAGT 59.896 41.667 0.00 0.00 0.00 2.57
3061 3168 4.652822 ACCAAAGCCCTGTTTTCTACTAG 58.347 43.478 0.00 0.00 0.00 2.57
3062 3169 4.717279 ACCAAAGCCCTGTTTTCTACTA 57.283 40.909 0.00 0.00 0.00 1.82
3063 3170 3.595190 ACCAAAGCCCTGTTTTCTACT 57.405 42.857 0.00 0.00 0.00 2.57
3064 3171 3.304458 CGAACCAAAGCCCTGTTTTCTAC 60.304 47.826 0.00 0.00 0.00 2.59
3065 3172 2.882137 CGAACCAAAGCCCTGTTTTCTA 59.118 45.455 0.00 0.00 0.00 2.10
3066 3173 1.681264 CGAACCAAAGCCCTGTTTTCT 59.319 47.619 0.00 0.00 0.00 2.52
3067 3174 1.269569 CCGAACCAAAGCCCTGTTTTC 60.270 52.381 0.00 0.00 0.00 2.29
3068 3175 0.750249 CCGAACCAAAGCCCTGTTTT 59.250 50.000 0.00 0.00 0.00 2.43
3069 3176 1.112916 CCCGAACCAAAGCCCTGTTT 61.113 55.000 0.00 0.00 0.00 2.83
3070 3177 1.530655 CCCGAACCAAAGCCCTGTT 60.531 57.895 0.00 0.00 0.00 3.16
3071 3178 2.115266 CCCGAACCAAAGCCCTGT 59.885 61.111 0.00 0.00 0.00 4.00
3072 3179 3.373565 GCCCGAACCAAAGCCCTG 61.374 66.667 0.00 0.00 0.00 4.45
3073 3180 4.678743 GGCCCGAACCAAAGCCCT 62.679 66.667 0.00 0.00 39.60 5.19
3075 3182 3.373565 CAGGCCCGAACCAAAGCC 61.374 66.667 0.00 0.00 46.13 4.35
3076 3183 3.373565 CCAGGCCCGAACCAAAGC 61.374 66.667 0.00 0.00 0.00 3.51
3077 3184 3.373565 GCCAGGCCCGAACCAAAG 61.374 66.667 0.00 0.00 0.00 2.77
3078 3185 4.986708 GGCCAGGCCCGAACCAAA 62.987 66.667 21.62 0.00 44.06 3.28
3089 3196 1.152881 GACTAATGGGCTGGCCAGG 60.153 63.158 33.46 20.55 37.98 4.45
3090 3197 1.152881 GGACTAATGGGCTGGCCAG 60.153 63.158 29.34 29.34 37.98 4.85
3091 3198 2.689691 GGGACTAATGGGCTGGCCA 61.690 63.158 26.08 26.08 37.98 5.36
3092 3199 2.195956 GGGACTAATGGGCTGGCC 59.804 66.667 14.23 14.23 0.00 5.36
3093 3200 2.203209 CGGGACTAATGGGCTGGC 60.203 66.667 0.00 0.00 0.00 4.85
3094 3201 1.921869 AACCGGGACTAATGGGCTGG 61.922 60.000 6.32 0.00 0.00 4.85
3095 3202 0.463833 GAACCGGGACTAATGGGCTG 60.464 60.000 6.32 0.00 0.00 4.85
3096 3203 0.620700 AGAACCGGGACTAATGGGCT 60.621 55.000 6.32 0.00 0.00 5.19
3097 3204 0.463833 CAGAACCGGGACTAATGGGC 60.464 60.000 6.32 0.00 0.00 5.36
3098 3205 0.463833 GCAGAACCGGGACTAATGGG 60.464 60.000 6.32 0.00 0.00 4.00
3099 3206 0.251916 TGCAGAACCGGGACTAATGG 59.748 55.000 6.32 0.00 0.00 3.16
3100 3207 1.942657 CATGCAGAACCGGGACTAATG 59.057 52.381 6.32 8.24 0.00 1.90
3101 3208 1.837439 TCATGCAGAACCGGGACTAAT 59.163 47.619 6.32 0.00 0.00 1.73
3102 3209 1.271856 TCATGCAGAACCGGGACTAA 58.728 50.000 6.32 0.00 0.00 2.24
3103 3210 1.271856 TTCATGCAGAACCGGGACTA 58.728 50.000 6.32 0.00 0.00 2.59
3104 3211 2.066340 TTCATGCAGAACCGGGACT 58.934 52.632 6.32 0.73 0.00 3.85
3105 3212 4.713946 TTCATGCAGAACCGGGAC 57.286 55.556 6.32 0.00 0.00 4.46
3112 3219 1.002624 GGTCCCGGTTCATGCAGAA 60.003 57.895 0.00 0.00 0.00 3.02
3113 3220 2.668632 GGTCCCGGTTCATGCAGA 59.331 61.111 0.00 0.00 0.00 4.26
3114 3221 2.438434 GGGTCCCGGTTCATGCAG 60.438 66.667 0.00 0.00 0.00 4.41
3115 3222 2.611505 ATGGGTCCCGGTTCATGCA 61.612 57.895 2.65 0.00 0.00 3.96
3116 3223 2.120909 CATGGGTCCCGGTTCATGC 61.121 63.158 2.65 0.00 32.04 4.06
3117 3224 1.453745 CCATGGGTCCCGGTTCATG 60.454 63.158 2.85 8.47 37.37 3.07
3118 3225 2.689691 CCCATGGGTCCCGGTTCAT 61.690 63.158 23.93 0.00 0.00 2.57
3119 3226 3.334891 CCCATGGGTCCCGGTTCA 61.335 66.667 23.93 0.00 0.00 3.18
3120 3227 4.123545 CCCCATGGGTCCCGGTTC 62.124 72.222 29.33 0.00 38.25 3.62
3130 3237 2.519302 GGACGAATGCCCCCATGG 60.519 66.667 4.14 4.14 37.09 3.66
3131 3238 2.519302 GGGACGAATGCCCCCATG 60.519 66.667 0.00 0.00 39.81 3.66
3144 3251 4.754667 GGGCTCACGAACCGGGAC 62.755 72.222 6.32 0.00 32.99 4.46
3146 3253 4.760047 CTGGGCTCACGAACCGGG 62.760 72.222 6.32 0.00 0.00 5.73
3147 3254 4.760047 CCTGGGCTCACGAACCGG 62.760 72.222 0.00 0.00 0.00 5.28
3148 3255 4.760047 CCCTGGGCTCACGAACCG 62.760 72.222 0.00 0.00 0.00 4.44
3149 3256 4.410400 CCCCTGGGCTCACGAACC 62.410 72.222 7.39 0.00 0.00 3.62
3150 3257 4.410400 CCCCCTGGGCTCACGAAC 62.410 72.222 7.39 0.00 35.35 3.95
3178 3285 2.438434 GGACCAATGCCCACGAGG 60.438 66.667 0.00 0.00 39.47 4.63
3179 3286 2.438434 GGGACCAATGCCCACGAG 60.438 66.667 0.00 0.00 45.31 4.18
3180 3287 4.402528 CGGGACCAATGCCCACGA 62.403 66.667 0.00 0.00 46.36 4.35
3182 3289 3.879180 AACCGGGACCAATGCCCAC 62.879 63.158 6.32 0.00 46.36 4.61
3183 3290 3.577334 GAACCGGGACCAATGCCCA 62.577 63.158 6.32 0.00 46.36 5.36
3184 3291 2.754254 GAACCGGGACCAATGCCC 60.754 66.667 6.32 0.00 42.41 5.36
3185 3292 3.131478 CGAACCGGGACCAATGCC 61.131 66.667 6.32 0.00 0.00 4.40
3186 3293 2.359478 ACGAACCGGGACCAATGC 60.359 61.111 6.32 0.00 0.00 3.56
3187 3294 1.019278 CAGACGAACCGGGACCAATG 61.019 60.000 6.32 0.00 0.00 2.82
3188 3295 1.295423 CAGACGAACCGGGACCAAT 59.705 57.895 6.32 0.00 0.00 3.16
3189 3296 2.738480 CAGACGAACCGGGACCAA 59.262 61.111 6.32 0.00 0.00 3.67
3190 3297 3.307906 CCAGACGAACCGGGACCA 61.308 66.667 6.32 0.00 0.00 4.02
3191 3298 2.993264 TCCAGACGAACCGGGACC 60.993 66.667 6.32 0.00 0.00 4.46
3192 3299 2.260743 GTCCAGACGAACCGGGAC 59.739 66.667 6.32 9.54 42.60 4.46
3193 3300 2.993264 GGTCCAGACGAACCGGGA 60.993 66.667 6.32 0.00 0.00 5.14
3194 3301 4.078516 GGGTCCAGACGAACCGGG 62.079 72.222 6.32 0.00 39.05 5.73
3198 3305 1.804748 GACAAATGGGTCCAGACGAAC 59.195 52.381 0.00 0.00 0.00 3.95
3199 3306 2.178912 GACAAATGGGTCCAGACGAA 57.821 50.000 0.00 0.00 0.00 3.85
3200 3307 3.927555 GACAAATGGGTCCAGACGA 57.072 52.632 0.00 0.00 0.00 4.20
3207 3314 0.037734 AGAACCGGGACAAATGGGTC 59.962 55.000 6.32 0.00 39.88 4.46
3208 3315 1.003928 GTAGAACCGGGACAAATGGGT 59.996 52.381 6.32 0.00 0.00 4.51
3209 3316 1.746470 GTAGAACCGGGACAAATGGG 58.254 55.000 6.32 0.00 0.00 4.00
3210 3317 1.365699 CGTAGAACCGGGACAAATGG 58.634 55.000 6.32 0.00 0.00 3.16
3211 3318 0.725117 GCGTAGAACCGGGACAAATG 59.275 55.000 6.32 0.00 0.00 2.32
3212 3319 0.322322 TGCGTAGAACCGGGACAAAT 59.678 50.000 6.32 0.00 0.00 2.32
3213 3320 0.322322 ATGCGTAGAACCGGGACAAA 59.678 50.000 6.32 0.00 0.00 2.83
3214 3321 0.390603 CATGCGTAGAACCGGGACAA 60.391 55.000 6.32 0.00 0.00 3.18
3215 3322 1.216977 CATGCGTAGAACCGGGACA 59.783 57.895 6.32 0.00 0.00 4.02
3216 3323 0.108520 TTCATGCGTAGAACCGGGAC 60.109 55.000 6.32 0.00 0.00 4.46
3217 3324 0.108520 GTTCATGCGTAGAACCGGGA 60.109 55.000 6.32 0.00 39.48 5.14
3218 3325 2.380081 GTTCATGCGTAGAACCGGG 58.620 57.895 6.32 0.00 39.48 5.73
3222 3329 0.108520 TCCCGGTTCATGCGTAGAAC 60.109 55.000 0.00 10.83 43.49 3.01
3223 3330 0.108520 GTCCCGGTTCATGCGTAGAA 60.109 55.000 0.00 0.00 0.00 2.10
3224 3331 1.514087 GTCCCGGTTCATGCGTAGA 59.486 57.895 0.00 0.00 0.00 2.59
3225 3332 1.520787 GGTCCCGGTTCATGCGTAG 60.521 63.158 0.00 0.00 0.00 3.51
3226 3333 1.828461 TTGGTCCCGGTTCATGCGTA 61.828 55.000 0.00 0.00 0.00 4.42
3227 3334 2.478335 ATTGGTCCCGGTTCATGCGT 62.478 55.000 0.00 0.00 0.00 5.24
3228 3335 1.748879 ATTGGTCCCGGTTCATGCG 60.749 57.895 0.00 0.00 0.00 4.73
3229 3336 1.666209 CCATTGGTCCCGGTTCATGC 61.666 60.000 0.00 0.00 0.00 4.06
3230 3337 0.323360 ACCATTGGTCCCGGTTCATG 60.323 55.000 1.37 0.00 0.00 3.07
3231 3338 0.034477 GACCATTGGTCCCGGTTCAT 60.034 55.000 23.00 0.00 46.19 2.57
3232 3339 1.377229 GACCATTGGTCCCGGTTCA 59.623 57.895 23.00 0.00 46.19 3.18
3233 3340 4.313819 GACCATTGGTCCCGGTTC 57.686 61.111 23.00 0.00 46.19 3.62
3241 3348 1.613630 AGGAGCGAGGACCATTGGT 60.614 57.895 8.42 8.42 39.44 3.67
3242 3349 1.153289 CAGGAGCGAGGACCATTGG 60.153 63.158 0.00 0.00 0.00 3.16
3243 3350 1.153289 CCAGGAGCGAGGACCATTG 60.153 63.158 0.00 0.00 0.00 2.82
3244 3351 3.036429 GCCAGGAGCGAGGACCATT 62.036 63.158 0.00 0.00 0.00 3.16
3245 3352 3.474570 GCCAGGAGCGAGGACCAT 61.475 66.667 0.00 0.00 0.00 3.55
3251 3358 2.434843 TATGTGGGCCAGGAGCGAG 61.435 63.158 6.40 0.00 45.17 5.03
3252 3359 2.364973 TATGTGGGCCAGGAGCGA 60.365 61.111 6.40 0.00 45.17 4.93
3253 3360 2.203070 GTATGTGGGCCAGGAGCG 60.203 66.667 6.40 0.00 45.17 5.03
3254 3361 0.106519 AATGTATGTGGGCCAGGAGC 60.107 55.000 6.40 0.00 42.60 4.70
3255 3362 1.683943 CAATGTATGTGGGCCAGGAG 58.316 55.000 6.40 0.00 0.00 3.69
3256 3363 0.258484 CCAATGTATGTGGGCCAGGA 59.742 55.000 6.40 0.00 32.03 3.86
3257 3364 0.033208 ACCAATGTATGTGGGCCAGG 60.033 55.000 6.40 4.20 40.75 4.45
3258 3365 1.392589 GACCAATGTATGTGGGCCAG 58.607 55.000 6.40 0.00 38.35 4.85
3259 3366 3.586843 GACCAATGTATGTGGGCCA 57.413 52.632 0.00 0.00 38.35 5.36
3261 3368 1.101049 CGGGACCAATGTATGTGGGC 61.101 60.000 0.00 0.00 44.26 5.36
3262 3369 0.465460 CCGGGACCAATGTATGTGGG 60.465 60.000 0.00 0.00 40.75 4.61
3263 3370 0.254747 ACCGGGACCAATGTATGTGG 59.745 55.000 6.32 0.00 42.28 4.17
3264 3371 2.014128 GAACCGGGACCAATGTATGTG 58.986 52.381 6.32 0.00 0.00 3.21
3265 3372 1.406341 CGAACCGGGACCAATGTATGT 60.406 52.381 6.32 0.00 0.00 2.29
3266 3373 1.295792 CGAACCGGGACCAATGTATG 58.704 55.000 6.32 0.00 0.00 2.39
3267 3374 0.906775 ACGAACCGGGACCAATGTAT 59.093 50.000 6.32 0.00 0.00 2.29
3268 3375 0.037139 CACGAACCGGGACCAATGTA 60.037 55.000 6.32 0.00 28.17 2.29
3269 3376 1.302192 CACGAACCGGGACCAATGT 60.302 57.895 6.32 0.00 28.17 2.71
3270 3377 2.686816 GCACGAACCGGGACCAATG 61.687 63.158 6.32 0.00 28.17 2.82
3271 3378 2.359478 GCACGAACCGGGACCAAT 60.359 61.111 6.32 0.00 28.17 3.16
3272 3379 4.629523 GGCACGAACCGGGACCAA 62.630 66.667 6.32 0.00 28.34 3.67
3274 3381 3.366739 CTAGGCACGAACCGGGACC 62.367 68.421 6.32 0.00 40.38 4.46
3275 3382 1.880819 TTCTAGGCACGAACCGGGAC 61.881 60.000 6.32 0.00 39.41 4.46
3276 3383 1.607178 TTCTAGGCACGAACCGGGA 60.607 57.895 6.32 0.00 28.17 5.14
3277 3384 1.447314 GTTCTAGGCACGAACCGGG 60.447 63.158 6.32 0.00 35.81 5.73
3278 3385 4.180496 GTTCTAGGCACGAACCGG 57.820 61.111 0.00 0.00 35.81 5.28
3281 3388 0.606604 TCCTGGTTCTAGGCACGAAC 59.393 55.000 9.57 9.57 39.92 3.95
3282 3389 0.606604 GTCCTGGTTCTAGGCACGAA 59.393 55.000 0.00 0.00 37.76 3.85
3283 3390 0.541063 TGTCCTGGTTCTAGGCACGA 60.541 55.000 0.00 0.00 37.76 4.35
3284 3391 0.108615 CTGTCCTGGTTCTAGGCACG 60.109 60.000 0.00 0.00 37.76 5.34
3285 3392 1.267121 TCTGTCCTGGTTCTAGGCAC 58.733 55.000 0.00 0.00 37.76 5.01
3286 3393 1.902508 CTTCTGTCCTGGTTCTAGGCA 59.097 52.381 0.00 0.00 37.76 4.75
3287 3394 1.208293 CCTTCTGTCCTGGTTCTAGGC 59.792 57.143 0.00 0.00 37.76 3.93
3288 3395 1.834263 CCCTTCTGTCCTGGTTCTAGG 59.166 57.143 0.00 0.00 39.29 3.02
3289 3396 1.834263 CCCCTTCTGTCCTGGTTCTAG 59.166 57.143 0.00 0.00 0.00 2.43
3290 3397 1.435563 TCCCCTTCTGTCCTGGTTCTA 59.564 52.381 0.00 0.00 0.00 2.10
3291 3398 0.193574 TCCCCTTCTGTCCTGGTTCT 59.806 55.000 0.00 0.00 0.00 3.01
3292 3399 0.615850 CTCCCCTTCTGTCCTGGTTC 59.384 60.000 0.00 0.00 0.00 3.62
3293 3400 1.492993 GCTCCCCTTCTGTCCTGGTT 61.493 60.000 0.00 0.00 0.00 3.67
3294 3401 1.920835 GCTCCCCTTCTGTCCTGGT 60.921 63.158 0.00 0.00 0.00 4.00
3295 3402 1.204113 AAGCTCCCCTTCTGTCCTGG 61.204 60.000 0.00 0.00 0.00 4.45
3296 3403 0.695347 AAAGCTCCCCTTCTGTCCTG 59.305 55.000 0.00 0.00 31.99 3.86
3297 3404 2.192263 CTAAAGCTCCCCTTCTGTCCT 58.808 52.381 0.00 0.00 31.99 3.85
3298 3405 1.909986 ACTAAAGCTCCCCTTCTGTCC 59.090 52.381 0.00 0.00 31.99 4.02
3299 3406 2.835156 AGACTAAAGCTCCCCTTCTGTC 59.165 50.000 0.00 0.00 36.64 3.51
3300 3407 2.835156 GAGACTAAAGCTCCCCTTCTGT 59.165 50.000 0.00 0.00 31.99 3.41
3301 3408 2.159170 CGAGACTAAAGCTCCCCTTCTG 60.159 54.545 0.00 0.00 31.99 3.02
3302 3409 2.104170 CGAGACTAAAGCTCCCCTTCT 58.896 52.381 0.00 0.00 31.99 2.85
3303 3410 1.137282 CCGAGACTAAAGCTCCCCTTC 59.863 57.143 0.00 0.00 31.99 3.46
3304 3411 1.196012 CCGAGACTAAAGCTCCCCTT 58.804 55.000 0.00 0.00 34.51 3.95
3305 3412 0.041386 ACCGAGACTAAAGCTCCCCT 59.959 55.000 0.00 0.00 0.00 4.79
3306 3413 2.593128 ACCGAGACTAAAGCTCCCC 58.407 57.895 0.00 0.00 0.00 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.