Multiple sequence alignment - TraesCS3D01G055700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G055700 chr3D 100.000 5561 0 0 1 5561 23086596 23081036 0.000000e+00 10270
1 TraesCS3D01G055700 chr3D 99.412 170 1 0 1585 1754 513620363 513620194 5.410000e-80 309
2 TraesCS3D01G055700 chr3D 96.703 182 5 1 1589 1770 214436881 214436701 9.050000e-78 302
3 TraesCS3D01G055700 chr3A 93.572 3625 154 31 1750 5327 32176195 32172603 0.000000e+00 5330
4 TraesCS3D01G055700 chr3A 89.856 1252 46 22 350 1590 32177374 32176193 0.000000e+00 1533
5 TraesCS3D01G055700 chr3A 88.963 299 25 6 3 299 32177752 32177460 4.090000e-96 363
6 TraesCS3D01G055700 chr3A 89.510 143 12 2 5421 5561 32172604 32172463 1.590000e-40 178
7 TraesCS3D01G055700 chr3B 93.805 3406 156 20 1952 5327 40528935 40525555 0.000000e+00 5070
8 TraesCS3D01G055700 chr3B 92.013 1252 56 18 350 1590 40530434 40529216 0.000000e+00 1718
9 TraesCS3D01G055700 chr3B 95.610 205 5 4 1750 1951 40529218 40529015 5.370000e-85 326
10 TraesCS3D01G055700 chr3B 81.199 367 26 16 12 354 40530833 40530486 7.150000e-64 255
11 TraesCS3D01G055700 chr3B 93.007 143 8 1 5421 5561 40525556 40525414 2.030000e-49 207
12 TraesCS3D01G055700 chr3B 93.277 119 6 2 5311 5429 20486593 20486477 2.060000e-39 174
13 TraesCS3D01G055700 chr5D 99.401 167 1 0 1587 1753 135659166 135659000 2.520000e-78 303
14 TraesCS3D01G055700 chr5D 95.722 187 6 2 1568 1753 355074542 355074727 3.260000e-77 300
15 TraesCS3D01G055700 chr5D 98.235 170 3 0 1585 1754 250070401 250070232 1.170000e-76 298
16 TraesCS3D01G055700 chr5D 85.864 191 22 4 12 201 549852916 549852730 1.220000e-46 198
17 TraesCS3D01G055700 chr4D 99.401 167 1 0 1587 1753 211346861 211346695 2.520000e-78 303
18 TraesCS3D01G055700 chr1D 98.817 169 2 0 1588 1756 310247093 310246925 9.050000e-78 302
19 TraesCS3D01G055700 chr2A 95.082 183 9 0 1570 1752 709834340 709834522 7.050000e-74 289
20 TraesCS3D01G055700 chr7D 93.264 193 9 4 1580 1771 540791267 540791078 1.180000e-71 281
21 TraesCS3D01G055700 chr5B 86.387 191 23 3 12 201 701457874 701457686 7.300000e-49 206
22 TraesCS3D01G055700 chr4A 85.340 191 24 3 12 201 617947464 617947651 1.580000e-45 195
23 TraesCS3D01G055700 chr4A 98.113 106 2 0 5318 5423 69316818 69316923 9.510000e-43 185
24 TraesCS3D01G055700 chr2B 97.222 108 2 1 5315 5422 584129508 584129402 1.230000e-41 182
25 TraesCS3D01G055700 chr2B 98.058 103 1 1 5325 5427 397939471 397939370 1.590000e-40 178
26 TraesCS3D01G055700 chr2B 95.536 112 2 3 5312 5422 159488003 159487894 5.730000e-40 176
27 TraesCS3D01G055700 chr4B 97.196 107 1 2 5318 5423 32922898 32922793 4.430000e-41 180
28 TraesCS3D01G055700 chr7B 95.536 112 3 2 5315 5425 591048775 591048665 1.590000e-40 178
29 TraesCS3D01G055700 chr7A 95.536 112 3 2 5321 5430 330338607 330338718 1.590000e-40 178
30 TraesCS3D01G055700 chr5A 93.966 116 3 4 5312 5425 598524792 598524679 7.410000e-39 172


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G055700 chr3D 23081036 23086596 5560 True 10270.0 10270 100.00000 1 5561 1 chr3D.!!$R1 5560
1 TraesCS3D01G055700 chr3A 32172463 32177752 5289 True 1851.0 5330 90.47525 3 5561 4 chr3A.!!$R1 5558
2 TraesCS3D01G055700 chr3B 40525414 40530833 5419 True 1515.2 5070 91.12680 12 5561 5 chr3B.!!$R2 5549

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
364 446 0.475906 ACATGCTTCCTAGATGGCCC 59.524 55.0 0.0 0.0 35.26 5.80 F
1399 1510 0.813184 TCTACGACGGACCCACATTC 59.187 55.0 0.0 0.0 0.00 2.67 F
1601 1716 0.108281 GCCTTGTACTCCCTCCGTTC 60.108 60.0 0.0 0.0 0.00 3.95 F
1602 1717 0.535797 CCTTGTACTCCCTCCGTTCC 59.464 60.0 0.0 0.0 0.00 3.62 F
3331 3553 0.661020 CACCACCGAGAAAACACCAC 59.339 55.0 0.0 0.0 0.00 4.16 F
4077 4299 0.108585 GGAGAGCAACTTCACCACCA 59.891 55.0 0.0 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1442 1553 0.033920 ACAGAGTGCATCTCAACGCA 59.966 50.000 15.59 0.0 44.98 5.24 R
3312 3534 0.661020 GTGGTGTTTTCTCGGTGGTG 59.339 55.000 0.00 0.0 0.00 4.17 R
3546 3768 1.228245 GGTTGCTGCCTCACCAGAA 60.228 57.895 0.00 0.0 34.77 3.02 R
3551 3773 1.308783 GCTAAGGGTTGCTGCCTCAC 61.309 60.000 0.00 0.0 0.00 3.51 R
4208 4430 0.034380 ATCAGATGCTGGTGCTTGCT 60.034 50.000 0.00 0.0 40.48 3.91 R
5411 5662 1.001406 GCCTGATTCATACTCCCTCCG 59.999 57.143 0.00 0.0 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 7.983484 GCCTCCAGATGTTAAATCATGAAAAAT 59.017 33.333 0.00 0.00 0.00 1.82
109 110 9.095065 AGTTATACCTTGAAATAAGCTACAACG 57.905 33.333 0.00 0.00 0.00 4.10
116 117 6.854496 TGAAATAAGCTACAACGACAAACT 57.146 33.333 0.00 0.00 0.00 2.66
127 128 6.056428 ACAACGACAAACTGAGGAATTTAC 57.944 37.500 0.00 0.00 0.00 2.01
130 131 4.755123 ACGACAAACTGAGGAATTTACCAG 59.245 41.667 0.00 0.00 0.00 4.00
131 132 4.154195 CGACAAACTGAGGAATTTACCAGG 59.846 45.833 0.00 0.00 0.00 4.45
139 140 2.308866 AGGAATTTACCAGGGTGACAGG 59.691 50.000 0.06 0.00 0.00 4.00
202 227 9.809096 TCTCTGAATACTTGATACTTTGCTTAG 57.191 33.333 0.00 0.00 0.00 2.18
203 228 9.593134 CTCTGAATACTTGATACTTTGCTTAGT 57.407 33.333 0.00 0.00 0.00 2.24
211 236 9.726438 ACTTGATACTTTGCTTAGTACTTTCAT 57.274 29.630 0.00 0.00 33.69 2.57
228 253 9.922305 GTACTTTCATAGTGTTATGCTTCATTC 57.078 33.333 0.00 0.00 37.73 2.67
252 277 2.507484 TCTAACTCGTTCCGGTTCTGA 58.493 47.619 0.00 0.00 0.00 3.27
293 318 7.115095 GCATAATACTCGGTACTCAATTCACTC 59.885 40.741 0.00 0.00 0.00 3.51
295 320 3.162666 ACTCGGTACTCAATTCACTCCA 58.837 45.455 0.00 0.00 0.00 3.86
296 321 3.056749 ACTCGGTACTCAATTCACTCCAC 60.057 47.826 0.00 0.00 0.00 4.02
297 322 2.894765 TCGGTACTCAATTCACTCCACA 59.105 45.455 0.00 0.00 0.00 4.17
298 323 3.322541 TCGGTACTCAATTCACTCCACAA 59.677 43.478 0.00 0.00 0.00 3.33
299 324 4.062293 CGGTACTCAATTCACTCCACAAA 58.938 43.478 0.00 0.00 0.00 2.83
300 325 4.513692 CGGTACTCAATTCACTCCACAAAA 59.486 41.667 0.00 0.00 0.00 2.44
301 326 5.008217 CGGTACTCAATTCACTCCACAAAAA 59.992 40.000 0.00 0.00 0.00 1.94
302 327 6.206498 GGTACTCAATTCACTCCACAAAAAC 58.794 40.000 0.00 0.00 0.00 2.43
303 328 6.039382 GGTACTCAATTCACTCCACAAAAACT 59.961 38.462 0.00 0.00 0.00 2.66
304 329 5.894807 ACTCAATTCACTCCACAAAAACTG 58.105 37.500 0.00 0.00 0.00 3.16
305 330 4.681744 TCAATTCACTCCACAAAAACTGC 58.318 39.130 0.00 0.00 0.00 4.40
306 331 4.159321 TCAATTCACTCCACAAAAACTGCA 59.841 37.500 0.00 0.00 0.00 4.41
307 332 3.502191 TTCACTCCACAAAAACTGCAC 57.498 42.857 0.00 0.00 0.00 4.57
364 446 0.475906 ACATGCTTCCTAGATGGCCC 59.524 55.000 0.00 0.00 35.26 5.80
425 507 1.913262 ATGTCGGTCAGGCTGGTGA 60.913 57.895 15.73 7.39 0.00 4.02
479 583 2.233922 ACTCATCCCGTTTGTCTGGTAG 59.766 50.000 0.00 0.00 0.00 3.18
480 584 2.496070 CTCATCCCGTTTGTCTGGTAGA 59.504 50.000 0.00 0.00 0.00 2.59
481 585 2.232941 TCATCCCGTTTGTCTGGTAGAC 59.767 50.000 2.11 2.11 45.26 2.59
482 586 2.005370 TCCCGTTTGTCTGGTAGACT 57.995 50.000 10.03 0.00 45.27 3.24
483 587 1.616865 TCCCGTTTGTCTGGTAGACTG 59.383 52.381 10.03 0.00 45.27 3.51
484 588 1.337823 CCCGTTTGTCTGGTAGACTGG 60.338 57.143 10.03 6.78 45.27 4.00
485 589 1.337823 CCGTTTGTCTGGTAGACTGGG 60.338 57.143 10.03 3.17 45.27 4.45
486 590 1.337823 CGTTTGTCTGGTAGACTGGGG 60.338 57.143 10.03 0.00 45.27 4.96
487 591 1.003233 GTTTGTCTGGTAGACTGGGGG 59.997 57.143 10.03 0.00 45.27 5.40
550 654 2.039879 TGCCTTCCTAGACAAAACCTCC 59.960 50.000 0.00 0.00 0.00 4.30
624 728 5.492895 TGAATAAAGCGAGACATAACCCAA 58.507 37.500 0.00 0.00 0.00 4.12
695 799 4.032558 GTCGATTGGTTACTAAAAGAGGCG 59.967 45.833 0.00 0.00 0.00 5.52
715 819 3.057526 GCGGTGTCCAAGAAATAGCTTTT 60.058 43.478 0.00 0.00 0.00 2.27
722 826 7.168135 GTGTCCAAGAAATAGCTTTTGACTTTG 59.832 37.037 0.00 0.00 32.43 2.77
723 827 7.147915 TGTCCAAGAAATAGCTTTTGACTTTGT 60.148 33.333 0.00 0.00 32.43 2.83
724 828 7.706607 GTCCAAGAAATAGCTTTTGACTTTGTT 59.293 33.333 0.00 0.00 30.31 2.83
725 829 8.257306 TCCAAGAAATAGCTTTTGACTTTGTTT 58.743 29.630 0.00 0.00 0.00 2.83
726 830 8.882736 CCAAGAAATAGCTTTTGACTTTGTTTT 58.117 29.630 0.00 0.00 0.00 2.43
727 831 9.906111 CAAGAAATAGCTTTTGACTTTGTTTTC 57.094 29.630 0.00 0.00 0.00 2.29
728 832 9.651913 AAGAAATAGCTTTTGACTTTGTTTTCA 57.348 25.926 0.00 0.00 0.00 2.69
729 833 9.087424 AGAAATAGCTTTTGACTTTGTTTTCAC 57.913 29.630 0.00 0.00 0.00 3.18
750 854 5.313772 TCACCCCTTTCCCTTTAAATAGACA 59.686 40.000 0.00 0.00 0.00 3.41
775 879 2.357009 CCTTAGCATTGCTGATGTGACC 59.643 50.000 21.31 0.00 40.10 4.02
776 880 2.042686 TAGCATTGCTGATGTGACCC 57.957 50.000 21.31 0.00 40.10 4.46
855 959 8.251750 ACTTCACTTTTACCTTTTGCTTTTTC 57.748 30.769 0.00 0.00 0.00 2.29
856 960 8.094548 ACTTCACTTTTACCTTTTGCTTTTTCT 58.905 29.630 0.00 0.00 0.00 2.52
858 962 7.836842 TCACTTTTACCTTTTGCTTTTTCTCT 58.163 30.769 0.00 0.00 0.00 3.10
891 997 8.622948 TCTCTGTCTTTTCCTTTTCTTTATCC 57.377 34.615 0.00 0.00 0.00 2.59
892 998 8.440771 TCTCTGTCTTTTCCTTTTCTTTATCCT 58.559 33.333 0.00 0.00 0.00 3.24
893 999 8.396272 TCTGTCTTTTCCTTTTCTTTATCCTG 57.604 34.615 0.00 0.00 0.00 3.86
894 1000 6.981722 TGTCTTTTCCTTTTCTTTATCCTGC 58.018 36.000 0.00 0.00 0.00 4.85
896 1002 6.209589 GTCTTTTCCTTTTCTTTATCCTGCCT 59.790 38.462 0.00 0.00 0.00 4.75
897 1003 6.434340 TCTTTTCCTTTTCTTTATCCTGCCTC 59.566 38.462 0.00 0.00 0.00 4.70
898 1004 5.520748 TTCCTTTTCTTTATCCTGCCTCT 57.479 39.130 0.00 0.00 0.00 3.69
899 1005 6.636454 TTCCTTTTCTTTATCCTGCCTCTA 57.364 37.500 0.00 0.00 0.00 2.43
901 1007 6.831976 TCCTTTTCTTTATCCTGCCTCTATC 58.168 40.000 0.00 0.00 0.00 2.08
903 1009 7.789831 TCCTTTTCTTTATCCTGCCTCTATCTA 59.210 37.037 0.00 0.00 0.00 1.98
1289 1397 5.132648 TGGAATACCCAGATTGTAGAAGCAT 59.867 40.000 0.00 0.00 40.82 3.79
1305 1413 6.705863 AGAAGCATCAGTTTCTTGAGTTTT 57.294 33.333 0.00 0.00 41.79 2.43
1399 1510 0.813184 TCTACGACGGACCCACATTC 59.187 55.000 0.00 0.00 0.00 2.67
1443 1554 9.853555 TTGTTACATAGTTCAGCCATTTTAATG 57.146 29.630 0.00 0.00 36.17 1.90
1450 1561 4.095410 TCAGCCATTTTAATGCGTTGAG 57.905 40.909 0.08 0.00 35.08 3.02
1453 1564 4.501559 CAGCCATTTTAATGCGTTGAGATG 59.498 41.667 0.08 4.24 35.08 2.90
1460 1571 2.831597 TGCGTTGAGATGCACTCTG 58.168 52.632 14.60 7.94 42.66 3.35
1467 1578 4.032217 CGTTGAGATGCACTCTGTGATTAC 59.968 45.833 14.60 0.00 45.13 1.89
1534 1645 7.430992 AGTTATATACACGCTCACTCGAATA 57.569 36.000 0.00 0.00 0.00 1.75
1535 1646 8.041829 AGTTATATACACGCTCACTCGAATAT 57.958 34.615 0.00 0.00 0.00 1.28
1536 1647 7.963465 AGTTATATACACGCTCACTCGAATATG 59.037 37.037 0.00 0.00 0.00 1.78
1537 1648 1.560923 ACACGCTCACTCGAATATGC 58.439 50.000 0.00 0.00 0.00 3.14
1538 1649 1.135112 ACACGCTCACTCGAATATGCA 60.135 47.619 0.00 0.00 0.00 3.96
1539 1650 1.256376 CACGCTCACTCGAATATGCAC 59.744 52.381 0.00 0.00 0.00 4.57
1540 1651 0.855349 CGCTCACTCGAATATGCACC 59.145 55.000 0.00 0.00 0.00 5.01
1541 1652 1.536922 CGCTCACTCGAATATGCACCT 60.537 52.381 0.00 0.00 0.00 4.00
1549 1660 6.659242 TCACTCGAATATGCACCTGATATAGA 59.341 38.462 0.00 0.00 0.00 1.98
1594 1709 1.027357 CATGCATGCCTTGTACTCCC 58.973 55.000 14.93 0.00 0.00 4.30
1595 1710 0.921896 ATGCATGCCTTGTACTCCCT 59.078 50.000 16.68 0.00 0.00 4.20
1596 1711 0.253044 TGCATGCCTTGTACTCCCTC 59.747 55.000 16.68 0.00 0.00 4.30
1597 1712 0.464554 GCATGCCTTGTACTCCCTCC 60.465 60.000 6.36 0.00 0.00 4.30
1598 1713 0.179073 CATGCCTTGTACTCCCTCCG 60.179 60.000 0.00 0.00 0.00 4.63
1599 1714 0.617820 ATGCCTTGTACTCCCTCCGT 60.618 55.000 0.00 0.00 0.00 4.69
1600 1715 0.834687 TGCCTTGTACTCCCTCCGTT 60.835 55.000 0.00 0.00 0.00 4.44
1601 1716 0.108281 GCCTTGTACTCCCTCCGTTC 60.108 60.000 0.00 0.00 0.00 3.95
1602 1717 0.535797 CCTTGTACTCCCTCCGTTCC 59.464 60.000 0.00 0.00 0.00 3.62
1603 1718 1.558233 CTTGTACTCCCTCCGTTCCT 58.442 55.000 0.00 0.00 0.00 3.36
1604 1719 2.622452 CCTTGTACTCCCTCCGTTCCTA 60.622 54.545 0.00 0.00 0.00 2.94
1605 1720 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
1606 1721 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
1607 1722 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
1608 1723 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
1609 1724 4.646492 TGTACTCCCTCCGTTCCTAAATAC 59.354 45.833 0.00 0.00 0.00 1.89
1610 1725 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
1611 1726 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
1612 1727 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
1613 1728 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
1614 1729 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
1615 1730 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
1616 1731 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
1617 1732 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
1618 1733 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
1619 1734 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
1620 1735 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
1621 1736 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
1622 1737 7.491696 CCGTTCCTAAATACTTGTCTTTCTAGG 59.508 40.741 0.00 0.00 0.00 3.02
1623 1738 7.010275 CGTTCCTAAATACTTGTCTTTCTAGGC 59.990 40.741 0.00 0.00 0.00 3.93
1624 1739 7.490657 TCCTAAATACTTGTCTTTCTAGGCA 57.509 36.000 0.00 0.00 33.22 4.75
1625 1740 8.090788 TCCTAAATACTTGTCTTTCTAGGCAT 57.909 34.615 0.00 0.00 35.56 4.40
1626 1741 8.548877 TCCTAAATACTTGTCTTTCTAGGCATT 58.451 33.333 0.00 0.00 35.56 3.56
1627 1742 9.178758 CCTAAATACTTGTCTTTCTAGGCATTT 57.821 33.333 0.00 0.00 35.56 2.32
1629 1744 8.635765 AAATACTTGTCTTTCTAGGCATTTCA 57.364 30.769 0.00 0.00 35.56 2.69
1630 1745 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
1631 1746 6.319141 ACTTGTCTTTCTAGGCATTTCAAC 57.681 37.500 0.00 0.00 35.56 3.18
1632 1747 5.827797 ACTTGTCTTTCTAGGCATTTCAACA 59.172 36.000 0.00 0.00 35.56 3.33
1633 1748 6.321181 ACTTGTCTTTCTAGGCATTTCAACAA 59.679 34.615 0.00 0.00 35.56 2.83
1634 1749 6.317789 TGTCTTTCTAGGCATTTCAACAAG 57.682 37.500 0.00 0.00 29.10 3.16
1635 1750 5.827797 TGTCTTTCTAGGCATTTCAACAAGT 59.172 36.000 0.00 0.00 29.10 3.16
1636 1751 6.145535 GTCTTTCTAGGCATTTCAACAAGTG 58.854 40.000 0.00 0.00 0.00 3.16
1637 1752 6.017109 GTCTTTCTAGGCATTTCAACAAGTGA 60.017 38.462 0.00 0.00 0.00 3.41
1638 1753 5.689383 TTCTAGGCATTTCAACAAGTGAC 57.311 39.130 0.00 0.00 35.39 3.67
1639 1754 4.973168 TCTAGGCATTTCAACAAGTGACT 58.027 39.130 0.00 0.00 40.60 3.41
1640 1755 6.109156 TCTAGGCATTTCAACAAGTGACTA 57.891 37.500 0.00 0.00 38.51 2.59
1641 1756 5.932303 TCTAGGCATTTCAACAAGTGACTAC 59.068 40.000 0.00 0.00 38.51 2.73
1642 1757 4.460263 AGGCATTTCAACAAGTGACTACA 58.540 39.130 0.00 0.00 35.84 2.74
1643 1758 5.072741 AGGCATTTCAACAAGTGACTACAT 58.927 37.500 0.00 0.00 35.84 2.29
1644 1759 6.237901 AGGCATTTCAACAAGTGACTACATA 58.762 36.000 0.00 0.00 35.84 2.29
1645 1760 6.149474 AGGCATTTCAACAAGTGACTACATAC 59.851 38.462 0.00 0.00 35.84 2.39
1646 1761 6.015504 GCATTTCAACAAGTGACTACATACG 58.984 40.000 0.00 0.00 35.39 3.06
1647 1762 6.534059 CATTTCAACAAGTGACTACATACGG 58.466 40.000 0.00 0.00 35.39 4.02
1648 1763 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
1649 1764 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
1650 1765 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
1651 1766 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
1652 1767 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
1653 1768 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
1654 1769 3.846360 AGTGACTACATACGGAGCAAAC 58.154 45.455 0.00 0.00 0.00 2.93
1655 1770 3.510360 AGTGACTACATACGGAGCAAACT 59.490 43.478 0.00 0.00 0.00 2.66
1656 1771 3.612860 GTGACTACATACGGAGCAAACTG 59.387 47.826 0.00 0.00 0.00 3.16
1657 1772 3.508402 TGACTACATACGGAGCAAACTGA 59.492 43.478 0.00 0.00 0.00 3.41
1658 1773 4.106197 GACTACATACGGAGCAAACTGAG 58.894 47.826 0.00 0.00 0.00 3.35
1659 1774 3.510360 ACTACATACGGAGCAAACTGAGT 59.490 43.478 0.00 0.00 0.00 3.41
1660 1775 2.688507 ACATACGGAGCAAACTGAGTG 58.311 47.619 0.00 0.00 0.00 3.51
1661 1776 2.299013 ACATACGGAGCAAACTGAGTGA 59.701 45.455 0.00 0.00 0.00 3.41
1662 1777 3.244078 ACATACGGAGCAAACTGAGTGAA 60.244 43.478 0.00 0.00 0.00 3.18
1663 1778 2.550830 ACGGAGCAAACTGAGTGAAT 57.449 45.000 0.00 0.00 0.00 2.57
1664 1779 2.417719 ACGGAGCAAACTGAGTGAATC 58.582 47.619 0.00 0.00 0.00 2.52
1665 1780 2.037772 ACGGAGCAAACTGAGTGAATCT 59.962 45.455 0.00 0.00 0.00 2.40
1666 1781 3.258372 ACGGAGCAAACTGAGTGAATCTA 59.742 43.478 0.00 0.00 0.00 1.98
1667 1782 3.614616 CGGAGCAAACTGAGTGAATCTAC 59.385 47.826 0.00 0.00 0.00 2.59
1668 1783 4.569943 GGAGCAAACTGAGTGAATCTACA 58.430 43.478 0.00 0.00 0.00 2.74
1669 1784 4.390297 GGAGCAAACTGAGTGAATCTACAC 59.610 45.833 0.00 0.00 40.60 2.90
1707 1822 5.447624 CATACATCCGTATGTGGTAGTCA 57.552 43.478 3.56 0.00 46.70 3.41
1708 1823 6.025749 CATACATCCGTATGTGGTAGTCAT 57.974 41.667 3.56 0.00 46.70 3.06
1709 1824 6.455647 CATACATCCGTATGTGGTAGTCATT 58.544 40.000 3.56 0.00 46.70 2.57
1710 1825 5.353394 ACATCCGTATGTGGTAGTCATTT 57.647 39.130 0.00 0.00 44.79 2.32
1711 1826 5.116180 ACATCCGTATGTGGTAGTCATTTG 58.884 41.667 0.00 0.00 44.79 2.32
1712 1827 5.105106 ACATCCGTATGTGGTAGTCATTTGA 60.105 40.000 0.00 0.00 44.79 2.69
1713 1828 5.408880 TCCGTATGTGGTAGTCATTTGAA 57.591 39.130 0.00 0.00 0.00 2.69
1714 1829 5.795972 TCCGTATGTGGTAGTCATTTGAAA 58.204 37.500 0.00 0.00 0.00 2.69
1715 1830 6.411376 TCCGTATGTGGTAGTCATTTGAAAT 58.589 36.000 0.00 0.00 0.00 2.17
1716 1831 6.315144 TCCGTATGTGGTAGTCATTTGAAATG 59.685 38.462 11.54 11.54 0.00 2.32
1717 1832 6.093495 CCGTATGTGGTAGTCATTTGAAATGT 59.907 38.462 16.62 2.38 0.00 2.71
1718 1833 7.180079 CGTATGTGGTAGTCATTTGAAATGTC 58.820 38.462 16.62 11.74 0.00 3.06
1719 1834 7.064609 CGTATGTGGTAGTCATTTGAAATGTCT 59.935 37.037 18.62 18.62 0.00 3.41
1720 1835 9.378551 GTATGTGGTAGTCATTTGAAATGTCTA 57.621 33.333 16.93 16.93 0.00 2.59
1721 1836 7.905604 TGTGGTAGTCATTTGAAATGTCTAG 57.094 36.000 19.92 0.00 0.00 2.43
1722 1837 7.676004 TGTGGTAGTCATTTGAAATGTCTAGA 58.324 34.615 19.92 10.61 0.00 2.43
1723 1838 8.154203 TGTGGTAGTCATTTGAAATGTCTAGAA 58.846 33.333 19.92 11.56 0.00 2.10
1724 1839 8.999431 GTGGTAGTCATTTGAAATGTCTAGAAA 58.001 33.333 19.92 9.72 0.00 2.52
1725 1840 9.219603 TGGTAGTCATTTGAAATGTCTAGAAAG 57.780 33.333 19.92 0.00 0.00 2.62
1726 1841 9.436957 GGTAGTCATTTGAAATGTCTAGAAAGA 57.563 33.333 19.92 3.04 0.00 2.52
1743 1858 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
1744 1859 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
1745 1860 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
1746 1861 8.319146 AGAAAGACAAATATTTAGGAACGGAGA 58.681 33.333 0.00 0.00 0.00 3.71
1747 1862 8.494016 AAAGACAAATATTTAGGAACGGAGAG 57.506 34.615 0.00 0.00 0.00 3.20
1748 1863 7.419711 AGACAAATATTTAGGAACGGAGAGA 57.580 36.000 0.00 0.00 0.00 3.10
1749 1864 7.493367 AGACAAATATTTAGGAACGGAGAGAG 58.507 38.462 0.00 0.00 0.00 3.20
1750 1865 7.124448 AGACAAATATTTAGGAACGGAGAGAGT 59.876 37.037 0.00 0.00 0.00 3.24
1751 1866 8.302515 ACAAATATTTAGGAACGGAGAGAGTA 57.697 34.615 0.00 0.00 0.00 2.59
1916 2033 2.316108 GTTTTGACAGGGGGTTCATGT 58.684 47.619 0.00 0.00 43.71 3.21
1951 2153 7.664082 AACATGCTTAGCTGCTTATATACTG 57.336 36.000 7.79 0.37 0.00 2.74
1952 2154 6.763355 ACATGCTTAGCTGCTTATATACTGT 58.237 36.000 7.79 1.01 0.00 3.55
1953 2155 7.896811 ACATGCTTAGCTGCTTATATACTGTA 58.103 34.615 7.79 0.00 0.00 2.74
2010 2212 4.765273 TCTCTTGTTTCTGTGTGCAAGTA 58.235 39.130 0.00 0.00 39.28 2.24
2037 2239 7.264294 AGTGAAAATAGTCAGGATTTCCTCT 57.736 36.000 0.00 0.00 46.65 3.69
2041 2243 8.041323 TGAAAATAGTCAGGATTTCCTCTACAC 58.959 37.037 0.00 0.00 46.65 2.90
2043 2245 3.791320 AGTCAGGATTTCCTCTACACCA 58.209 45.455 0.00 0.00 46.65 4.17
2059 2262 6.707290 TCTACACCAATAGTTTGTGCATACT 58.293 36.000 0.00 0.00 0.00 2.12
2093 2296 8.363390 TCCTGCTCATCAATATCTAAACTAGTG 58.637 37.037 0.00 0.00 0.00 2.74
2100 2303 8.986847 CATCAATATCTAAACTAGTGAAGCAGG 58.013 37.037 0.00 0.00 28.33 4.85
2145 2348 2.088950 TAGGTTCCTAGCGTTTGTGC 57.911 50.000 0.00 0.00 0.00 4.57
2162 2365 4.339872 TGTGCCAATGCTTCTTCAAAAT 57.660 36.364 0.00 0.00 38.71 1.82
2405 2614 8.702438 CATGGTTTTGCAATTTTAGTAAGTCTG 58.298 33.333 0.00 0.00 0.00 3.51
2417 2626 6.985188 TTAGTAAGTCTGAAATGATGTGCC 57.015 37.500 0.00 0.00 0.00 5.01
2474 2683 7.057894 ACACTATCCCAGTTTTTACTGTGAAA 58.942 34.615 4.76 0.00 34.26 2.69
2754 2964 2.547595 CCTGGCCTTCCCTTTCCCA 61.548 63.158 3.32 0.00 0.00 4.37
2988 3198 0.803768 CAATCTCTGCACGGGACTCG 60.804 60.000 0.00 0.00 45.88 4.18
3021 3231 1.139058 GTGAGGGATATGCAGGACGTT 59.861 52.381 0.00 0.00 0.00 3.99
3331 3553 0.661020 CACCACCGAGAAAACACCAC 59.339 55.000 0.00 0.00 0.00 4.16
3347 3569 1.118838 CCACCACCCTCAAAGCAAAA 58.881 50.000 0.00 0.00 0.00 2.44
3365 3587 2.938956 AAAAGTCCCACCACTCAGAG 57.061 50.000 0.00 0.00 0.00 3.35
3367 3589 2.334006 AAGTCCCACCACTCAGAGAT 57.666 50.000 3.79 0.00 0.00 2.75
3370 3592 1.480137 GTCCCACCACTCAGAGATCAG 59.520 57.143 3.79 0.00 0.00 2.90
3390 3612 1.876156 GCTAGCAGTGTTCAAAGCACT 59.124 47.619 10.63 0.00 46.86 4.40
3414 3636 3.056035 CGAGTAACTTCTTTACCCCAGCT 60.056 47.826 0.00 0.00 41.10 4.24
3449 3671 4.763793 CACCACCAAAATGTCTCAGAGAAT 59.236 41.667 0.20 0.00 0.00 2.40
3459 3681 5.506686 TGTCTCAGAGAATTGATACCGAG 57.493 43.478 0.20 0.00 0.00 4.63
3519 3741 3.701040 CCGGTCAAGGATCATCCAAAAAT 59.299 43.478 6.42 0.00 39.61 1.82
3545 3767 3.306225 CCTGATAAGCTCCATCTCTCTGC 60.306 52.174 9.10 0.00 0.00 4.26
3546 3768 3.574749 TGATAAGCTCCATCTCTCTGCT 58.425 45.455 9.10 0.00 35.30 4.24
3547 3769 3.966006 TGATAAGCTCCATCTCTCTGCTT 59.034 43.478 9.10 0.00 44.65 3.91
3548 3770 2.985957 AAGCTCCATCTCTCTGCTTC 57.014 50.000 0.00 0.00 39.40 3.86
3551 3773 1.202557 GCTCCATCTCTCTGCTTCTGG 60.203 57.143 0.00 0.00 0.00 3.86
3669 3891 1.138247 GGCCGCAGCTGATCAAAAG 59.862 57.895 20.43 0.00 39.73 2.27
3714 3936 3.340928 TGTGGCATTCAGAGACATTCAG 58.659 45.455 0.00 0.00 0.00 3.02
3788 4010 3.228188 AGGTAGAGAGGCTGATCAGAG 57.772 52.381 27.04 1.76 0.00 3.35
3903 4125 1.753073 CCAATGAAAGAGGGTGCCATC 59.247 52.381 0.00 0.00 0.00 3.51
3905 4127 2.827322 CAATGAAAGAGGGTGCCATCAA 59.173 45.455 5.66 0.00 0.00 2.57
3915 4137 2.621998 GGGTGCCATCAATGAAGATGAG 59.378 50.000 5.57 0.00 46.51 2.90
3917 4139 1.944709 TGCCATCAATGAAGATGAGCG 59.055 47.619 5.57 0.00 46.51 5.03
3924 4146 2.215907 ATGAAGATGAGCGGTTCTCG 57.784 50.000 0.00 0.00 44.86 4.04
3968 4190 0.450983 GAGCAAAGTGATCCAGCAGC 59.549 55.000 0.00 0.00 0.00 5.25
3984 4206 0.583438 CAGCACTCAAACCACAGTCG 59.417 55.000 0.00 0.00 0.00 4.18
4004 4226 1.490490 GACAGATATGCAACCCCCTCA 59.510 52.381 0.00 0.00 0.00 3.86
4034 4256 0.809241 GCTGGCACAAGAGATCCTCG 60.809 60.000 0.00 0.00 38.70 4.63
4035 4257 0.809241 CTGGCACAAGAGATCCTCGC 60.809 60.000 0.00 0.00 38.70 5.03
4077 4299 0.108585 GGAGAGCAACTTCACCACCA 59.891 55.000 0.00 0.00 0.00 4.17
4078 4300 1.517242 GAGAGCAACTTCACCACCAG 58.483 55.000 0.00 0.00 0.00 4.00
4108 4330 1.278985 TGGCTTCTGATGATCGTGGTT 59.721 47.619 0.00 0.00 0.00 3.67
4153 4375 1.000060 CCACCAATGAGCAACAACCAG 60.000 52.381 0.00 0.00 0.00 4.00
4262 4484 6.405286 CCGATATCTTCCAAGGATAGTAGCAG 60.405 46.154 0.34 0.00 0.00 4.24
4355 4577 0.250597 AGCATGAGACAACAGCAGCA 60.251 50.000 0.00 0.00 0.00 4.41
4365 4587 1.000607 CAACAGCAGCAGCAAAGTGAT 60.001 47.619 3.17 0.00 45.49 3.06
4558 4780 1.531602 GGCTCAAGCAAACCCACCT 60.532 57.895 4.13 0.00 44.36 4.00
4717 4939 8.185506 TGCTCGTTAATAAGGTCCATTATCTA 57.814 34.615 0.00 0.00 0.00 1.98
4768 4991 7.335627 CAATTTGTCTACTCCACCTGGTATAA 58.664 38.462 0.00 0.00 36.34 0.98
4769 4992 7.691993 ATTTGTCTACTCCACCTGGTATAAT 57.308 36.000 0.00 0.00 36.34 1.28
4783 5006 9.661563 CACCTGGTATAATGTTACTACTTTTCA 57.338 33.333 0.00 0.00 0.00 2.69
4893 5116 8.076178 GTGCAACAGTTTGTTCTACATAAGAAT 58.924 33.333 0.00 0.00 41.04 2.40
4916 5139 9.846248 GAATCATATGCCTTTGTATTTATCCAC 57.154 33.333 0.00 0.00 0.00 4.02
4924 5147 6.531240 GCCTTTGTATTTATCCACATGTGTTG 59.469 38.462 23.79 10.23 0.00 3.33
4943 5166 4.065088 GTTGACCTTAGTGATGTGCTTGA 58.935 43.478 0.00 0.00 0.00 3.02
4988 5211 5.958380 TGAAGTCATACCTGTTCTGGATAGT 59.042 40.000 2.86 0.00 0.00 2.12
5007 5230 0.400525 TCCTAGCTTGCAGCCCCTAT 60.401 55.000 0.00 0.00 43.77 2.57
5134 5360 2.548057 ACAGTTGCAAATCCACACTACG 59.452 45.455 0.00 0.00 0.00 3.51
5212 5461 6.959639 ATGTTAACAACACAGGAATGAACT 57.040 33.333 13.23 0.00 45.50 3.01
5218 5467 4.704540 ACAACACAGGAATGAACTCAACAA 59.295 37.500 0.00 0.00 0.00 2.83
5325 5576 8.274322 TGATGTTGTACCTGGAAGATAAATCAT 58.726 33.333 0.00 0.00 34.07 2.45
5326 5577 9.778741 GATGTTGTACCTGGAAGATAAATCATA 57.221 33.333 0.00 0.00 34.07 2.15
5327 5578 8.958119 TGTTGTACCTGGAAGATAAATCATAC 57.042 34.615 0.00 0.00 34.07 2.39
5328 5579 8.768397 TGTTGTACCTGGAAGATAAATCATACT 58.232 33.333 0.00 0.00 34.07 2.12
5329 5580 9.262358 GTTGTACCTGGAAGATAAATCATACTC 57.738 37.037 0.00 0.00 34.07 2.59
5330 5581 7.963532 TGTACCTGGAAGATAAATCATACTCC 58.036 38.462 0.00 0.00 34.07 3.85
5331 5582 6.441088 ACCTGGAAGATAAATCATACTCCC 57.559 41.667 0.00 0.00 34.07 4.30
5332 5583 6.153924 ACCTGGAAGATAAATCATACTCCCT 58.846 40.000 0.00 0.00 34.07 4.20
5333 5584 6.271159 ACCTGGAAGATAAATCATACTCCCTC 59.729 42.308 0.00 0.00 34.07 4.30
5334 5585 6.296145 CCTGGAAGATAAATCATACTCCCTCC 60.296 46.154 0.00 0.00 34.07 4.30
5335 5586 5.246203 TGGAAGATAAATCATACTCCCTCCG 59.754 44.000 0.00 0.00 0.00 4.63
5336 5587 5.246429 GGAAGATAAATCATACTCCCTCCGT 59.754 44.000 0.00 0.00 0.00 4.69
5337 5588 5.986501 AGATAAATCATACTCCCTCCGTC 57.013 43.478 0.00 0.00 0.00 4.79
5338 5589 4.773149 AGATAAATCATACTCCCTCCGTCC 59.227 45.833 0.00 0.00 0.00 4.79
5339 5590 1.718280 AATCATACTCCCTCCGTCCC 58.282 55.000 0.00 0.00 0.00 4.46
5340 5591 0.561184 ATCATACTCCCTCCGTCCCA 59.439 55.000 0.00 0.00 0.00 4.37
5341 5592 0.337082 TCATACTCCCTCCGTCCCAA 59.663 55.000 0.00 0.00 0.00 4.12
5342 5593 1.200519 CATACTCCCTCCGTCCCAAA 58.799 55.000 0.00 0.00 0.00 3.28
5343 5594 1.557832 CATACTCCCTCCGTCCCAAAA 59.442 52.381 0.00 0.00 0.00 2.44
5344 5595 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
5345 5596 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
5346 5597 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
5347 5598 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
5348 5599 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
5349 5600 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
5350 5601 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
5351 5602 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
5352 5603 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
5353 5604 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
5354 5605 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
5355 5606 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
5356 5607 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
5357 5608 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
5358 5609 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
5359 5610 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
5360 5611 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
5361 5612 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
5362 5613 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
5363 5614 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
5364 5615 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
5367 5618 8.535690 AATAAGTGTCTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
5368 5619 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
5369 5620 5.774630 AGTGTCTCAACTTTGTACTAGCTC 58.225 41.667 0.00 0.00 0.00 4.09
5370 5621 5.536916 AGTGTCTCAACTTTGTACTAGCTCT 59.463 40.000 0.00 0.00 0.00 4.09
5371 5622 6.715718 AGTGTCTCAACTTTGTACTAGCTCTA 59.284 38.462 0.00 0.00 0.00 2.43
5372 5623 7.024768 GTGTCTCAACTTTGTACTAGCTCTAG 58.975 42.308 0.00 2.55 39.04 2.43
5374 5625 7.881751 TGTCTCAACTTTGTACTAGCTCTAGTA 59.118 37.037 11.59 11.59 43.98 1.82
5398 5649 7.801716 ACAAATTTGTACTAAGCTCAAGACA 57.198 32.000 22.10 0.00 40.16 3.41
5399 5650 7.639945 ACAAATTTGTACTAAGCTCAAGACAC 58.360 34.615 22.10 2.09 40.16 3.67
5400 5651 7.499232 ACAAATTTGTACTAAGCTCAAGACACT 59.501 33.333 22.10 0.00 40.16 3.55
5401 5652 8.345565 CAAATTTGTACTAAGCTCAAGACACTT 58.654 33.333 10.15 0.00 0.00 3.16
5402 5653 9.555727 AAATTTGTACTAAGCTCAAGACACTTA 57.444 29.630 3.19 0.00 0.00 2.24
5403 5654 9.726438 AATTTGTACTAAGCTCAAGACACTTAT 57.274 29.630 3.19 0.00 0.00 1.73
5404 5655 9.726438 ATTTGTACTAAGCTCAAGACACTTATT 57.274 29.630 3.19 0.00 0.00 1.40
5405 5656 9.555727 TTTGTACTAAGCTCAAGACACTTATTT 57.444 29.630 3.19 0.00 0.00 1.40
5406 5657 9.555727 TTGTACTAAGCTCAAGACACTTATTTT 57.444 29.630 3.19 0.00 0.00 1.82
5407 5658 8.988934 TGTACTAAGCTCAAGACACTTATTTTG 58.011 33.333 3.19 0.00 0.00 2.44
5408 5659 9.204570 GTACTAAGCTCAAGACACTTATTTTGA 57.795 33.333 3.19 0.00 0.00 2.69
5409 5660 8.316640 ACTAAGCTCAAGACACTTATTTTGAG 57.683 34.615 8.33 8.33 45.75 3.02
5410 5661 8.150945 ACTAAGCTCAAGACACTTATTTTGAGA 58.849 33.333 15.10 0.00 45.82 3.27
5411 5662 6.793492 AGCTCAAGACACTTATTTTGAGAC 57.207 37.500 15.10 7.85 45.82 3.36
5412 5663 5.406780 AGCTCAAGACACTTATTTTGAGACG 59.593 40.000 15.10 0.00 45.82 4.18
5413 5664 5.389935 GCTCAAGACACTTATTTTGAGACGG 60.390 44.000 15.10 0.00 45.82 4.79
5414 5665 5.849510 TCAAGACACTTATTTTGAGACGGA 58.150 37.500 0.00 0.00 0.00 4.69
5415 5666 5.926542 TCAAGACACTTATTTTGAGACGGAG 59.073 40.000 0.00 0.00 0.00 4.63
5416 5667 4.822026 AGACACTTATTTTGAGACGGAGG 58.178 43.478 0.00 0.00 0.00 4.30
5417 5668 3.933332 GACACTTATTTTGAGACGGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
5418 5669 3.581332 ACACTTATTTTGAGACGGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
5419 5670 4.184629 CACTTATTTTGAGACGGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
5490 5743 3.760684 CCCTTTGTCTCCTCATTTCTTGG 59.239 47.826 0.00 0.00 0.00 3.61
5553 5806 4.201891 GCAATGAGCTATCACTTGGACTTG 60.202 45.833 0.00 0.00 38.57 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.374613 CCTTTTGTTTTCCTCTACCTATGTCC 59.625 42.308 0.00 0.00 0.00 4.02
1 2 6.940867 ACCTTTTGTTTTCCTCTACCTATGTC 59.059 38.462 0.00 0.00 0.00 3.06
3 4 6.940298 TGACCTTTTGTTTTCCTCTACCTATG 59.060 38.462 0.00 0.00 0.00 2.23
5 6 6.503560 TGACCTTTTGTTTTCCTCTACCTA 57.496 37.500 0.00 0.00 0.00 3.08
7 8 4.023107 GCTGACCTTTTGTTTTCCTCTACC 60.023 45.833 0.00 0.00 0.00 3.18
8 9 4.023107 GGCTGACCTTTTGTTTTCCTCTAC 60.023 45.833 0.00 0.00 0.00 2.59
55 56 9.148879 TCACAAATGTTATTTCTTTTCCCCTTA 57.851 29.630 0.00 0.00 0.00 2.69
56 57 8.028652 TCACAAATGTTATTTCTTTTCCCCTT 57.971 30.769 0.00 0.00 0.00 3.95
58 59 9.586435 CTATCACAAATGTTATTTCTTTTCCCC 57.414 33.333 0.00 0.00 0.00 4.81
109 110 4.459337 CCCTGGTAAATTCCTCAGTTTGTC 59.541 45.833 0.00 0.00 0.00 3.18
116 117 2.983192 TGTCACCCTGGTAAATTCCTCA 59.017 45.455 0.00 0.00 0.00 3.86
127 128 1.142870 TCTTGTTTCCTGTCACCCTGG 59.857 52.381 0.00 0.00 0.00 4.45
130 131 1.954382 GGTTCTTGTTTCCTGTCACCC 59.046 52.381 0.00 0.00 0.00 4.61
131 132 1.954382 GGGTTCTTGTTTCCTGTCACC 59.046 52.381 0.00 0.00 0.00 4.02
139 140 1.468914 GAGCGATGGGGTTCTTGTTTC 59.531 52.381 0.00 0.00 0.00 2.78
177 178 9.593134 ACTAAGCAAAGTATCAAGTATTCAGAG 57.407 33.333 0.00 0.00 0.00 3.35
202 227 9.922305 GAATGAAGCATAACACTATGAAAGTAC 57.078 33.333 0.00 0.00 37.68 2.73
203 228 9.890629 AGAATGAAGCATAACACTATGAAAGTA 57.109 29.630 0.00 0.00 37.68 2.24
204 229 8.798859 AGAATGAAGCATAACACTATGAAAGT 57.201 30.769 0.00 0.00 37.68 2.66
215 240 9.250624 ACGAGTTAGAATAGAATGAAGCATAAC 57.749 33.333 0.00 0.00 0.00 1.89
252 277 8.131100 CGAGTATTATGCTTCATTTTTGTGGAT 58.869 33.333 0.00 0.00 0.00 3.41
293 318 2.652941 AGTGTGTGCAGTTTTTGTGG 57.347 45.000 0.00 0.00 0.00 4.17
295 320 2.560542 TCCAAGTGTGTGCAGTTTTTGT 59.439 40.909 0.00 0.00 36.20 2.83
296 321 2.923020 GTCCAAGTGTGTGCAGTTTTTG 59.077 45.455 0.00 0.00 36.20 2.44
297 322 2.560542 TGTCCAAGTGTGTGCAGTTTTT 59.439 40.909 0.00 0.00 36.20 1.94
298 323 2.166829 TGTCCAAGTGTGTGCAGTTTT 58.833 42.857 0.00 0.00 36.20 2.43
299 324 1.832883 TGTCCAAGTGTGTGCAGTTT 58.167 45.000 0.00 0.00 36.20 2.66
300 325 1.472480 GTTGTCCAAGTGTGTGCAGTT 59.528 47.619 0.00 0.00 38.70 3.16
301 326 1.094785 GTTGTCCAAGTGTGTGCAGT 58.905 50.000 0.00 0.00 0.00 4.40
302 327 1.093972 TGTTGTCCAAGTGTGTGCAG 58.906 50.000 0.00 0.00 0.00 4.41
303 328 0.808125 GTGTTGTCCAAGTGTGTGCA 59.192 50.000 0.00 0.00 0.00 4.57
304 329 0.808125 TGTGTTGTCCAAGTGTGTGC 59.192 50.000 0.00 0.00 0.00 4.57
305 330 2.682352 TCATGTGTTGTCCAAGTGTGTG 59.318 45.455 0.00 0.00 0.00 3.82
306 331 2.997980 TCATGTGTTGTCCAAGTGTGT 58.002 42.857 0.00 0.00 0.00 3.72
307 332 4.276678 AGAATCATGTGTTGTCCAAGTGTG 59.723 41.667 0.00 0.00 0.00 3.82
364 446 3.440173 ACCTCAGTAAATTGCCAATCACG 59.560 43.478 0.00 0.00 0.00 4.35
425 507 3.069443 CAGGGTGCCTTTGTTGTTTGTAT 59.931 43.478 0.00 0.00 0.00 2.29
484 588 1.303282 CTTCCTTGTACCAGCCCCC 59.697 63.158 0.00 0.00 0.00 5.40
485 589 1.303282 CCTTCCTTGTACCAGCCCC 59.697 63.158 0.00 0.00 0.00 5.80
486 590 1.303282 CCCTTCCTTGTACCAGCCC 59.697 63.158 0.00 0.00 0.00 5.19
487 591 1.303282 CCCCTTCCTTGTACCAGCC 59.697 63.158 0.00 0.00 0.00 4.85
488 592 1.378646 GCCCCTTCCTTGTACCAGC 60.379 63.158 0.00 0.00 0.00 4.85
489 593 1.303282 GGCCCCTTCCTTGTACCAG 59.697 63.158 0.00 0.00 0.00 4.00
490 594 0.849094 ATGGCCCCTTCCTTGTACCA 60.849 55.000 0.00 0.00 0.00 3.25
491 595 1.133884 GTATGGCCCCTTCCTTGTACC 60.134 57.143 0.00 0.00 0.00 3.34
492 596 1.562475 TGTATGGCCCCTTCCTTGTAC 59.438 52.381 0.00 0.00 0.00 2.90
493 597 1.843851 CTGTATGGCCCCTTCCTTGTA 59.156 52.381 0.00 0.00 0.00 2.41
494 598 0.625849 CTGTATGGCCCCTTCCTTGT 59.374 55.000 0.00 0.00 0.00 3.16
495 599 0.106519 CCTGTATGGCCCCTTCCTTG 60.107 60.000 0.00 0.00 0.00 3.61
496 600 0.552615 ACCTGTATGGCCCCTTCCTT 60.553 55.000 0.00 0.00 40.22 3.36
497 601 0.988678 GACCTGTATGGCCCCTTCCT 60.989 60.000 0.00 0.00 40.22 3.36
498 602 0.988678 AGACCTGTATGGCCCCTTCC 60.989 60.000 0.00 0.00 40.22 3.46
499 603 0.181350 CAGACCTGTATGGCCCCTTC 59.819 60.000 0.00 0.00 40.22 3.46
500 604 0.253160 TCAGACCTGTATGGCCCCTT 60.253 55.000 0.00 0.00 40.22 3.95
624 728 5.850614 AGTAACGGACACTGTTCTATTTGT 58.149 37.500 0.00 0.00 0.00 2.83
669 773 6.395629 CCTCTTTTAGTAACCAATCGACTCA 58.604 40.000 0.00 0.00 0.00 3.41
695 799 5.241728 AGTCAAAAGCTATTTCTTGGACACC 59.758 40.000 5.60 0.00 35.45 4.16
715 819 3.449377 GGAAAGGGGTGAAAACAAAGTCA 59.551 43.478 0.00 0.00 0.00 3.41
722 826 5.617528 TTTAAAGGGAAAGGGGTGAAAAC 57.382 39.130 0.00 0.00 0.00 2.43
723 827 7.233962 GTCTATTTAAAGGGAAAGGGGTGAAAA 59.766 37.037 0.00 0.00 0.00 2.29
724 828 6.722590 GTCTATTTAAAGGGAAAGGGGTGAAA 59.277 38.462 0.00 0.00 0.00 2.69
725 829 6.183361 TGTCTATTTAAAGGGAAAGGGGTGAA 60.183 38.462 0.00 0.00 0.00 3.18
726 830 5.313772 TGTCTATTTAAAGGGAAAGGGGTGA 59.686 40.000 0.00 0.00 0.00 4.02
727 831 5.576128 TGTCTATTTAAAGGGAAAGGGGTG 58.424 41.667 0.00 0.00 0.00 4.61
728 832 5.315109 ACTGTCTATTTAAAGGGAAAGGGGT 59.685 40.000 12.24 0.00 0.00 4.95
729 833 5.827756 ACTGTCTATTTAAAGGGAAAGGGG 58.172 41.667 12.24 0.00 0.00 4.79
750 854 4.080919 TCACATCAGCAATGCTAAGGTACT 60.081 41.667 7.70 0.00 37.09 2.73
758 862 0.330604 AGGGTCACATCAGCAATGCT 59.669 50.000 0.00 0.00 40.77 3.79
775 879 2.715749 TAGGTGTTGCCATCATGAGG 57.284 50.000 0.09 0.00 40.61 3.86
776 880 4.264253 TCTTTAGGTGTTGCCATCATGAG 58.736 43.478 0.09 0.00 40.61 2.90
855 959 5.468409 GGAAAAGACAGAGAACAAAGGAGAG 59.532 44.000 0.00 0.00 0.00 3.20
856 960 5.131142 AGGAAAAGACAGAGAACAAAGGAGA 59.869 40.000 0.00 0.00 0.00 3.71
858 962 5.373812 AGGAAAAGACAGAGAACAAAGGA 57.626 39.130 0.00 0.00 0.00 3.36
891 997 6.183360 GGGACGATAGAAATAGATAGAGGCAG 60.183 46.154 0.00 0.00 41.38 4.85
892 998 5.652891 GGGACGATAGAAATAGATAGAGGCA 59.347 44.000 0.00 0.00 41.38 4.75
893 999 6.139048 GGGACGATAGAAATAGATAGAGGC 57.861 45.833 0.00 0.00 41.38 4.70
1283 1391 6.292008 GCAAAAACTCAAGAAACTGATGCTTC 60.292 38.462 0.00 0.00 0.00 3.86
1289 1397 6.024552 ACTTGCAAAAACTCAAGAAACTGA 57.975 33.333 0.00 0.00 41.50 3.41
1372 1483 1.470458 GGTCCGTCGTAGAATGGAACC 60.470 57.143 0.00 0.00 42.97 3.62
1399 1510 1.531149 CAAGCAGTGTTACCTTGTCGG 59.469 52.381 0.00 0.00 39.35 4.79
1442 1553 0.033920 ACAGAGTGCATCTCAACGCA 59.966 50.000 15.59 0.00 44.98 5.24
1443 1554 0.441533 CACAGAGTGCATCTCAACGC 59.558 55.000 15.59 0.00 44.98 4.84
1450 1561 5.869753 AACAAGTAATCACAGAGTGCATC 57.130 39.130 0.00 0.00 32.98 3.91
1453 1564 5.179368 TGCTTAACAAGTAATCACAGAGTGC 59.821 40.000 0.00 0.00 32.98 4.40
1460 1571 6.086222 CCACACATGCTTAACAAGTAATCAC 58.914 40.000 0.00 0.00 0.00 3.06
1467 1578 5.431420 TGTAACCACACATGCTTAACAAG 57.569 39.130 0.00 0.00 0.00 3.16
1534 1645 4.487804 ACAGGAGTCTATATCAGGTGCAT 58.512 43.478 0.00 0.00 0.00 3.96
1535 1646 3.891977 GACAGGAGTCTATATCAGGTGCA 59.108 47.826 0.00 0.00 41.64 4.57
1536 1647 4.513198 GACAGGAGTCTATATCAGGTGC 57.487 50.000 0.00 0.00 41.64 5.01
1590 1705 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
1591 1706 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
1592 1707 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
1593 1708 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
1594 1709 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
1595 1710 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
1596 1711 7.491696 CCTAGAAAGACAAGTATTTAGGAACGG 59.508 40.741 4.01 0.00 26.70 4.44
1597 1712 7.010275 GCCTAGAAAGACAAGTATTTAGGAACG 59.990 40.741 11.40 0.00 26.70 3.95
1598 1713 7.822822 TGCCTAGAAAGACAAGTATTTAGGAAC 59.177 37.037 11.40 0.00 26.70 3.62
1599 1714 7.913789 TGCCTAGAAAGACAAGTATTTAGGAA 58.086 34.615 11.40 1.02 26.70 3.36
1600 1715 7.490657 TGCCTAGAAAGACAAGTATTTAGGA 57.509 36.000 11.40 0.00 26.70 2.94
1601 1716 8.738645 AATGCCTAGAAAGACAAGTATTTAGG 57.261 34.615 5.26 5.26 0.00 2.69
1603 1718 9.733556 TGAAATGCCTAGAAAGACAAGTATTTA 57.266 29.630 0.00 0.00 0.00 1.40
1604 1719 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
1605 1720 8.515414 GTTGAAATGCCTAGAAAGACAAGTATT 58.485 33.333 0.00 0.00 0.00 1.89
1606 1721 7.665559 TGTTGAAATGCCTAGAAAGACAAGTAT 59.334 33.333 0.00 0.00 0.00 2.12
1607 1722 6.995686 TGTTGAAATGCCTAGAAAGACAAGTA 59.004 34.615 0.00 0.00 0.00 2.24
1608 1723 5.827797 TGTTGAAATGCCTAGAAAGACAAGT 59.172 36.000 0.00 0.00 0.00 3.16
1609 1724 6.317789 TGTTGAAATGCCTAGAAAGACAAG 57.682 37.500 0.00 0.00 0.00 3.16
1610 1725 6.321181 ACTTGTTGAAATGCCTAGAAAGACAA 59.679 34.615 0.00 0.00 0.00 3.18
1611 1726 5.827797 ACTTGTTGAAATGCCTAGAAAGACA 59.172 36.000 0.00 0.00 0.00 3.41
1612 1727 6.017109 TCACTTGTTGAAATGCCTAGAAAGAC 60.017 38.462 0.00 0.00 0.00 3.01
1613 1728 6.017109 GTCACTTGTTGAAATGCCTAGAAAGA 60.017 38.462 0.00 0.00 35.39 2.52
1614 1729 6.016777 AGTCACTTGTTGAAATGCCTAGAAAG 60.017 38.462 0.00 0.00 35.39 2.62
1615 1730 5.827797 AGTCACTTGTTGAAATGCCTAGAAA 59.172 36.000 0.00 0.00 35.39 2.52
1616 1731 5.376625 AGTCACTTGTTGAAATGCCTAGAA 58.623 37.500 0.00 0.00 35.39 2.10
1617 1732 4.973168 AGTCACTTGTTGAAATGCCTAGA 58.027 39.130 0.00 0.00 35.39 2.43
1618 1733 5.700832 TGTAGTCACTTGTTGAAATGCCTAG 59.299 40.000 0.00 0.00 35.39 3.02
1619 1734 5.616270 TGTAGTCACTTGTTGAAATGCCTA 58.384 37.500 0.00 0.00 35.39 3.93
1620 1735 4.460263 TGTAGTCACTTGTTGAAATGCCT 58.540 39.130 0.00 0.00 35.39 4.75
1621 1736 4.829064 TGTAGTCACTTGTTGAAATGCC 57.171 40.909 0.00 0.00 35.39 4.40
1622 1737 6.015504 CGTATGTAGTCACTTGTTGAAATGC 58.984 40.000 0.00 0.00 35.39 3.56
1623 1738 6.367695 TCCGTATGTAGTCACTTGTTGAAATG 59.632 38.462 0.00 0.00 35.39 2.32
1624 1739 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
1625 1740 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
1626 1741 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
1627 1742 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
1628 1743 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
1629 1744 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
1630 1745 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
1631 1746 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
1632 1747 4.021368 AGTTTGCTCCGTATGTAGTCACTT 60.021 41.667 0.00 0.00 0.00 3.16
1633 1748 3.510360 AGTTTGCTCCGTATGTAGTCACT 59.490 43.478 0.00 0.00 0.00 3.41
1634 1749 3.612860 CAGTTTGCTCCGTATGTAGTCAC 59.387 47.826 0.00 0.00 0.00 3.67
1635 1750 3.508402 TCAGTTTGCTCCGTATGTAGTCA 59.492 43.478 0.00 0.00 0.00 3.41
1636 1751 4.106029 TCAGTTTGCTCCGTATGTAGTC 57.894 45.455 0.00 0.00 0.00 2.59
1637 1752 3.510360 ACTCAGTTTGCTCCGTATGTAGT 59.490 43.478 0.00 0.00 0.00 2.73
1638 1753 3.859961 CACTCAGTTTGCTCCGTATGTAG 59.140 47.826 0.00 0.00 0.00 2.74
1639 1754 3.508402 TCACTCAGTTTGCTCCGTATGTA 59.492 43.478 0.00 0.00 0.00 2.29
1640 1755 2.299013 TCACTCAGTTTGCTCCGTATGT 59.701 45.455 0.00 0.00 0.00 2.29
1641 1756 2.959516 TCACTCAGTTTGCTCCGTATG 58.040 47.619 0.00 0.00 0.00 2.39
1642 1757 3.678056 TTCACTCAGTTTGCTCCGTAT 57.322 42.857 0.00 0.00 0.00 3.06
1643 1758 3.258372 AGATTCACTCAGTTTGCTCCGTA 59.742 43.478 0.00 0.00 0.00 4.02
1644 1759 2.037772 AGATTCACTCAGTTTGCTCCGT 59.962 45.455 0.00 0.00 0.00 4.69
1645 1760 2.693069 AGATTCACTCAGTTTGCTCCG 58.307 47.619 0.00 0.00 0.00 4.63
1646 1761 4.390297 GTGTAGATTCACTCAGTTTGCTCC 59.610 45.833 0.00 0.00 35.68 4.70
1647 1762 5.233988 AGTGTAGATTCACTCAGTTTGCTC 58.766 41.667 0.00 0.00 44.07 4.26
1648 1763 5.220710 AGTGTAGATTCACTCAGTTTGCT 57.779 39.130 0.00 0.00 44.07 3.91
1686 1801 6.665992 AATGACTACCACATACGGATGTAT 57.334 37.500 14.23 7.46 44.82 2.29
1687 1802 6.097129 TCAAATGACTACCACATACGGATGTA 59.903 38.462 14.23 0.00 44.82 2.29
1689 1804 5.356426 TCAAATGACTACCACATACGGATG 58.644 41.667 5.94 5.94 39.16 3.51
1690 1805 5.607939 TCAAATGACTACCACATACGGAT 57.392 39.130 0.00 0.00 0.00 4.18
1691 1806 5.408880 TTCAAATGACTACCACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
1692 1807 6.093495 ACATTTCAAATGACTACCACATACGG 59.907 38.462 17.30 0.00 0.00 4.02
1693 1808 7.064609 AGACATTTCAAATGACTACCACATACG 59.935 37.037 17.30 0.00 0.00 3.06
1694 1809 8.268850 AGACATTTCAAATGACTACCACATAC 57.731 34.615 17.30 0.00 0.00 2.39
1695 1810 9.599866 CTAGACATTTCAAATGACTACCACATA 57.400 33.333 17.30 0.00 0.00 2.29
1696 1811 8.321353 TCTAGACATTTCAAATGACTACCACAT 58.679 33.333 17.30 0.00 0.00 3.21
1697 1812 7.676004 TCTAGACATTTCAAATGACTACCACA 58.324 34.615 17.30 0.05 0.00 4.17
1698 1813 8.547967 TTCTAGACATTTCAAATGACTACCAC 57.452 34.615 17.30 0.12 0.00 4.16
1699 1814 9.219603 CTTTCTAGACATTTCAAATGACTACCA 57.780 33.333 17.30 5.07 0.00 3.25
1700 1815 9.436957 TCTTTCTAGACATTTCAAATGACTACC 57.563 33.333 17.30 1.06 0.00 3.18
1717 1832 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
1718 1833 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
1719 1834 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
1720 1835 8.319146 TCTCCGTTCCTAAATATTTGTCTTTCT 58.681 33.333 11.05 0.00 0.00 2.52
1721 1836 8.488651 TCTCCGTTCCTAAATATTTGTCTTTC 57.511 34.615 11.05 0.00 0.00 2.62
1722 1837 8.319146 TCTCTCCGTTCCTAAATATTTGTCTTT 58.681 33.333 11.05 0.00 0.00 2.52
1723 1838 7.848128 TCTCTCCGTTCCTAAATATTTGTCTT 58.152 34.615 11.05 0.00 0.00 3.01
1724 1839 7.124448 ACTCTCTCCGTTCCTAAATATTTGTCT 59.876 37.037 11.05 0.00 0.00 3.41
1725 1840 7.266400 ACTCTCTCCGTTCCTAAATATTTGTC 58.734 38.462 11.05 0.00 0.00 3.18
1726 1841 7.184067 ACTCTCTCCGTTCCTAAATATTTGT 57.816 36.000 11.05 0.00 0.00 2.83
1727 1842 7.382759 GCTACTCTCTCCGTTCCTAAATATTTG 59.617 40.741 11.05 1.40 0.00 2.32
1728 1843 7.288158 AGCTACTCTCTCCGTTCCTAAATATTT 59.712 37.037 5.89 5.89 0.00 1.40
1729 1844 6.778559 AGCTACTCTCTCCGTTCCTAAATATT 59.221 38.462 0.00 0.00 0.00 1.28
1730 1845 6.308566 AGCTACTCTCTCCGTTCCTAAATAT 58.691 40.000 0.00 0.00 0.00 1.28
1731 1846 5.692928 AGCTACTCTCTCCGTTCCTAAATA 58.307 41.667 0.00 0.00 0.00 1.40
1732 1847 4.538738 AGCTACTCTCTCCGTTCCTAAAT 58.461 43.478 0.00 0.00 0.00 1.40
1733 1848 3.965694 AGCTACTCTCTCCGTTCCTAAA 58.034 45.455 0.00 0.00 0.00 1.85
1734 1849 3.648507 AGCTACTCTCTCCGTTCCTAA 57.351 47.619 0.00 0.00 0.00 2.69
1735 1850 3.071312 CCTAGCTACTCTCTCCGTTCCTA 59.929 52.174 0.00 0.00 0.00 2.94
1736 1851 2.158726 CCTAGCTACTCTCTCCGTTCCT 60.159 54.545 0.00 0.00 0.00 3.36
1737 1852 2.158784 TCCTAGCTACTCTCTCCGTTCC 60.159 54.545 0.00 0.00 0.00 3.62
1738 1853 3.196939 TCCTAGCTACTCTCTCCGTTC 57.803 52.381 0.00 0.00 0.00 3.95
1739 1854 3.648507 TTCCTAGCTACTCTCTCCGTT 57.351 47.619 0.00 0.00 0.00 4.44
1740 1855 3.547746 CTTTCCTAGCTACTCTCTCCGT 58.452 50.000 0.00 0.00 0.00 4.69
1741 1856 2.882137 CCTTTCCTAGCTACTCTCTCCG 59.118 54.545 0.00 0.00 0.00 4.63
1742 1857 3.905968 ACCTTTCCTAGCTACTCTCTCC 58.094 50.000 0.00 0.00 0.00 3.71
1743 1858 4.951094 TCAACCTTTCCTAGCTACTCTCTC 59.049 45.833 0.00 0.00 0.00 3.20
1744 1859 4.936802 TCAACCTTTCCTAGCTACTCTCT 58.063 43.478 0.00 0.00 0.00 3.10
1745 1860 5.128008 ACATCAACCTTTCCTAGCTACTCTC 59.872 44.000 0.00 0.00 0.00 3.20
1746 1861 5.026790 ACATCAACCTTTCCTAGCTACTCT 58.973 41.667 0.00 0.00 0.00 3.24
1747 1862 5.346181 ACATCAACCTTTCCTAGCTACTC 57.654 43.478 0.00 0.00 0.00 2.59
1748 1863 6.212791 TGTTACATCAACCTTTCCTAGCTACT 59.787 38.462 0.00 0.00 36.20 2.57
1749 1864 6.403878 TGTTACATCAACCTTTCCTAGCTAC 58.596 40.000 0.00 0.00 36.20 3.58
1750 1865 6.614694 TGTTACATCAACCTTTCCTAGCTA 57.385 37.500 0.00 0.00 36.20 3.32
1751 1866 5.499004 TGTTACATCAACCTTTCCTAGCT 57.501 39.130 0.00 0.00 36.20 3.32
1895 2012 2.315176 CATGAACCCCCTGTCAAAACA 58.685 47.619 0.00 0.00 0.00 2.83
1916 2033 5.471116 CAGCTAAGCATGTTATATTGCCAGA 59.529 40.000 0.00 0.00 39.72 3.86
1949 2151 7.970614 GGAAACCTGAATGCTAAAGAAATACAG 59.029 37.037 0.00 0.00 0.00 2.74
1950 2152 7.450014 TGGAAACCTGAATGCTAAAGAAATACA 59.550 33.333 0.00 0.00 0.00 2.29
1951 2153 7.826690 TGGAAACCTGAATGCTAAAGAAATAC 58.173 34.615 0.00 0.00 0.00 1.89
1952 2154 8.415950 TTGGAAACCTGAATGCTAAAGAAATA 57.584 30.769 0.00 0.00 0.00 1.40
1953 2155 6.916360 TGGAAACCTGAATGCTAAAGAAAT 57.084 33.333 0.00 0.00 0.00 2.17
1968 2170 1.119684 GGGTGTTGCTTTGGAAACCT 58.880 50.000 0.00 0.00 30.01 3.50
2010 2212 6.216456 AGGAAATCCTGACTATTTTCACTCCT 59.784 38.462 0.00 0.00 46.55 3.69
2037 2239 7.547722 CACTAGTATGCACAAACTATTGGTGTA 59.452 37.037 0.00 0.00 41.01 2.90
2041 2243 6.985188 ACACTAGTATGCACAAACTATTGG 57.015 37.500 18.86 10.03 41.01 3.16
2043 2245 9.326413 GGAATACACTAGTATGCACAAACTATT 57.674 33.333 0.00 0.00 40.00 1.73
2059 2262 8.427902 AGATATTGATGAGCAGGAATACACTA 57.572 34.615 0.00 0.00 0.00 2.74
2093 2296 2.679082 TCCCCTACTACATCCTGCTTC 58.321 52.381 0.00 0.00 0.00 3.86
2145 2348 8.936070 TCATAATCATTTTGAAGAAGCATTGG 57.064 30.769 0.00 0.00 0.00 3.16
2236 2439 5.221682 ACAAACCATGATGGAGCAATTTGAA 60.222 36.000 23.19 0.00 40.96 2.69
2405 2614 1.812571 ACACGGAAGGCACATCATTTC 59.187 47.619 0.00 0.00 0.00 2.17
2457 2666 8.586570 TGCATAAATTTCACAGTAAAAACTGG 57.413 30.769 10.08 0.25 41.76 4.00
2754 2964 4.400567 TCGATGTCACTCATGTCTTCATCT 59.599 41.667 13.66 0.00 36.83 2.90
2988 3198 2.670934 CTCACCACCTGCTGCCAC 60.671 66.667 0.00 0.00 0.00 5.01
3021 3231 2.265367 TCCATTTGGTACTGCTCCTCA 58.735 47.619 0.00 0.00 36.34 3.86
3079 3301 2.596631 CTGCCACTGCCACTGCTT 60.597 61.111 0.00 0.00 38.71 3.91
3312 3534 0.661020 GTGGTGTTTTCTCGGTGGTG 59.339 55.000 0.00 0.00 0.00 4.17
3347 3569 2.103153 TCTCTGAGTGGTGGGACTTT 57.897 50.000 4.32 0.00 0.00 2.66
3365 3587 3.181512 GCTTTGAACACTGCTAGCTGATC 60.182 47.826 26.29 19.45 0.00 2.92
3367 3589 2.146342 GCTTTGAACACTGCTAGCTGA 58.854 47.619 26.29 1.23 0.00 4.26
3370 3592 1.876156 AGTGCTTTGAACACTGCTAGC 59.124 47.619 8.10 8.10 46.38 3.42
3390 3612 4.082026 GCTGGGGTAAAGAAGTTACTCGTA 60.082 45.833 0.00 0.00 43.27 3.43
3414 3636 3.009115 GTGGTGCTAGGAGGGGCA 61.009 66.667 0.00 0.00 36.01 5.36
3449 3671 3.134081 GGAGGTGGATTTCTCGGTATCAA 59.866 47.826 0.00 0.00 0.00 2.57
3459 3681 2.428530 GGCATCTTTGGAGGTGGATTTC 59.571 50.000 0.00 0.00 34.44 2.17
3519 3741 2.632028 GAGATGGAGCTTATCAGGAGCA 59.368 50.000 12.65 0.00 42.56 4.26
3545 3767 1.239968 GGTTGCTGCCTCACCAGAAG 61.240 60.000 0.00 0.00 34.77 2.85
3546 3768 1.228245 GGTTGCTGCCTCACCAGAA 60.228 57.895 0.00 0.00 34.77 3.02
3547 3769 2.431683 GGTTGCTGCCTCACCAGA 59.568 61.111 0.00 0.00 34.77 3.86
3548 3770 2.674380 GGGTTGCTGCCTCACCAG 60.674 66.667 13.00 0.00 35.93 4.00
3551 3773 1.308783 GCTAAGGGTTGCTGCCTCAC 61.309 60.000 0.00 0.00 0.00 3.51
3558 3780 2.791655 GTAGGTTTGCTAAGGGTTGCT 58.208 47.619 0.00 0.00 0.00 3.91
3669 3891 0.533491 TTGGCAAATGAGCAGCATCC 59.467 50.000 0.00 0.00 35.78 3.51
3693 3915 3.008266 TCTGAATGTCTCTGAATGCCACA 59.992 43.478 0.00 0.00 0.00 4.17
3714 3936 2.035066 AGCTTGTGGTGCAGTTTCATTC 59.965 45.455 0.00 0.00 0.00 2.67
3764 3986 3.295093 TGATCAGCCTCTCTACCTTCTG 58.705 50.000 0.00 0.00 0.00 3.02
3834 4056 1.095807 GCGGTGCTTGAGGGGTATTC 61.096 60.000 0.00 0.00 0.00 1.75
3903 4125 2.283617 CGAGAACCGCTCATCTTCATTG 59.716 50.000 0.00 0.00 44.15 2.82
3905 4127 1.751351 TCGAGAACCGCTCATCTTCAT 59.249 47.619 0.00 0.00 44.15 2.57
3915 4137 0.525882 GCCTCTTAGTCGAGAACCGC 60.526 60.000 0.00 0.00 38.37 5.68
3917 4139 2.093106 TGAGCCTCTTAGTCGAGAACC 58.907 52.381 0.00 0.00 32.74 3.62
3924 4146 4.940654 AGCATTTTTCTGAGCCTCTTAGTC 59.059 41.667 0.00 0.00 0.00 2.59
3968 4190 1.860950 CTGTCGACTGTGGTTTGAGTG 59.139 52.381 17.92 0.00 0.00 3.51
3984 4206 1.490490 TGAGGGGGTTGCATATCTGTC 59.510 52.381 0.00 0.00 0.00 3.51
4004 4226 1.302832 GTGCCAGCTGCCTGTACTT 60.303 57.895 8.66 0.00 40.16 2.24
4021 4243 0.820871 GGAGTGCGAGGATCTCTTGT 59.179 55.000 0.00 0.00 0.00 3.16
4034 4256 1.400846 CATCAGCTGTGATTGGAGTGC 59.599 52.381 14.67 0.00 40.84 4.40
4035 4257 2.981898 TCATCAGCTGTGATTGGAGTG 58.018 47.619 14.67 0.87 40.84 3.51
4077 4299 2.555664 TCAGAAGCCATTCCTCCTTCT 58.444 47.619 0.00 0.00 44.38 2.85
4078 4300 3.118112 TCATCAGAAGCCATTCCTCCTTC 60.118 47.826 0.00 0.00 35.94 3.46
4108 4330 1.234821 GATTTTCGTGGCTGTGTGGA 58.765 50.000 0.00 0.00 0.00 4.02
4208 4430 0.034380 ATCAGATGCTGGTGCTTGCT 60.034 50.000 0.00 0.00 40.48 3.91
4355 4577 6.703607 CGATCTAATGGACTTATCACTTTGCT 59.296 38.462 0.00 0.00 0.00 3.91
4365 4587 1.684450 TGCGGCGATCTAATGGACTTA 59.316 47.619 12.98 0.00 0.00 2.24
4395 4617 2.620115 TGAAGCTTCAGAACCTTGCTTG 59.380 45.455 25.16 0.00 42.95 4.01
4436 4658 1.003696 CTGGAGTTCTCCCAGGTTTCC 59.996 57.143 15.20 0.00 45.66 3.13
4522 4744 2.880890 AGCCATCCGATTTGCTGTTATC 59.119 45.455 2.09 0.00 31.70 1.75
4558 4780 9.391006 GACATCACCTTTATTACCATCAAACTA 57.609 33.333 0.00 0.00 0.00 2.24
4740 4963 2.375174 AGGTGGAGTAGACAAATTGGCA 59.625 45.455 0.10 0.00 0.00 4.92
4768 4991 6.892658 TGCACCATTGAAAAGTAGTAACAT 57.107 33.333 0.00 0.00 0.00 2.71
4769 4992 6.892658 ATGCACCATTGAAAAGTAGTAACA 57.107 33.333 0.00 0.00 0.00 2.41
4893 5116 8.795513 CATGTGGATAAATACAAAGGCATATGA 58.204 33.333 6.97 0.00 0.00 2.15
4916 5139 4.378770 GCACATCACTAAGGTCAACACATG 60.379 45.833 0.00 0.00 0.00 3.21
4924 5147 5.412594 TCAATTCAAGCACATCACTAAGGTC 59.587 40.000 0.00 0.00 0.00 3.85
4943 5166 4.895297 TCAAAGAAGCCCAGAAGTTCAATT 59.105 37.500 5.50 0.00 0.00 2.32
5007 5230 4.594062 TGTGTAACTTAGCTTGTCCCCTTA 59.406 41.667 0.00 0.00 38.04 2.69
5081 5305 4.795469 TCATGTTCCTACCGGTGTATCTA 58.205 43.478 19.93 0.00 0.00 1.98
5134 5360 5.185828 AGCCAAATTCAGATTTGTTCCTACC 59.814 40.000 10.05 0.00 46.90 3.18
5195 5426 4.269183 TGTTGAGTTCATTCCTGTGTTGT 58.731 39.130 0.00 0.00 0.00 3.32
5212 5461 9.575783 GAATAAGTTTTTGGTAAGTGTTGTTGA 57.424 29.630 0.00 0.00 0.00 3.18
5218 5467 7.124448 TGGGTTGAATAAGTTTTTGGTAAGTGT 59.876 33.333 0.00 0.00 0.00 3.55
5325 5576 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
5326 5577 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
5327 5578 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
5328 5579 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
5329 5580 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
5330 5581 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
5331 5582 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
5332 5583 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
5333 5584 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
5334 5585 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
5335 5586 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
5336 5587 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
5337 5588 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
5338 5589 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
5341 5592 8.989980 GCTAGTACAAAGTTGAGACACTTATTT 58.010 33.333 0.00 0.00 35.87 1.40
5342 5593 8.368668 AGCTAGTACAAAGTTGAGACACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
5343 5594 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
5344 5595 7.230913 AGAGCTAGTACAAAGTTGAGACACTTA 59.769 37.037 0.00 0.00 35.87 2.24
5345 5596 6.041069 AGAGCTAGTACAAAGTTGAGACACTT 59.959 38.462 0.00 0.00 38.74 3.16
5346 5597 5.536916 AGAGCTAGTACAAAGTTGAGACACT 59.463 40.000 0.00 0.00 0.00 3.55
5347 5598 5.774630 AGAGCTAGTACAAAGTTGAGACAC 58.225 41.667 0.00 0.00 0.00 3.67
5348 5599 6.715718 ACTAGAGCTAGTACAAAGTTGAGACA 59.284 38.462 8.35 0.00 43.98 3.41
5349 5600 7.148355 ACTAGAGCTAGTACAAAGTTGAGAC 57.852 40.000 8.35 0.00 43.98 3.36
5373 5624 8.770828 GTGTCTTGAGCTTAGTACAAATTTGTA 58.229 33.333 23.91 23.91 42.35 2.41
5374 5625 7.499232 AGTGTCTTGAGCTTAGTACAAATTTGT 59.501 33.333 25.99 25.99 44.86 2.83
5375 5626 7.865707 AGTGTCTTGAGCTTAGTACAAATTTG 58.134 34.615 16.67 16.67 0.00 2.32
5376 5627 8.451908 AAGTGTCTTGAGCTTAGTACAAATTT 57.548 30.769 0.00 0.00 0.00 1.82
5377 5628 9.726438 ATAAGTGTCTTGAGCTTAGTACAAATT 57.274 29.630 0.00 0.00 0.00 1.82
5378 5629 9.726438 AATAAGTGTCTTGAGCTTAGTACAAAT 57.274 29.630 0.00 0.00 0.00 2.32
5379 5630 9.555727 AAATAAGTGTCTTGAGCTTAGTACAAA 57.444 29.630 0.00 0.00 0.00 2.83
5380 5631 9.555727 AAAATAAGTGTCTTGAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
5381 5632 8.988934 CAAAATAAGTGTCTTGAGCTTAGTACA 58.011 33.333 0.00 0.00 0.00 2.90
5382 5633 9.204570 TCAAAATAAGTGTCTTGAGCTTAGTAC 57.795 33.333 0.00 0.00 0.00 2.73
5383 5634 9.424319 CTCAAAATAAGTGTCTTGAGCTTAGTA 57.576 33.333 0.00 0.00 38.63 1.82
5384 5635 8.150945 TCTCAAAATAAGTGTCTTGAGCTTAGT 58.849 33.333 5.91 0.00 42.87 2.24
5385 5636 8.439286 GTCTCAAAATAAGTGTCTTGAGCTTAG 58.561 37.037 5.91 0.00 42.87 2.18
5386 5637 7.116376 CGTCTCAAAATAAGTGTCTTGAGCTTA 59.884 37.037 5.91 0.00 42.87 3.09
5387 5638 6.073548 CGTCTCAAAATAAGTGTCTTGAGCTT 60.074 38.462 5.91 0.00 42.87 3.74
5388 5639 5.406780 CGTCTCAAAATAAGTGTCTTGAGCT 59.593 40.000 5.91 0.00 42.87 4.09
5389 5640 5.389935 CCGTCTCAAAATAAGTGTCTTGAGC 60.390 44.000 5.91 1.95 42.87 4.26
5390 5641 5.926542 TCCGTCTCAAAATAAGTGTCTTGAG 59.073 40.000 4.63 4.63 43.97 3.02
5391 5642 5.849510 TCCGTCTCAAAATAAGTGTCTTGA 58.150 37.500 0.00 0.00 0.00 3.02
5392 5643 5.120830 CCTCCGTCTCAAAATAAGTGTCTTG 59.879 44.000 0.00 0.00 0.00 3.02
5393 5644 5.238583 CCTCCGTCTCAAAATAAGTGTCTT 58.761 41.667 0.00 0.00 0.00 3.01
5394 5645 4.322801 CCCTCCGTCTCAAAATAAGTGTCT 60.323 45.833 0.00 0.00 0.00 3.41
5395 5646 3.933332 CCCTCCGTCTCAAAATAAGTGTC 59.067 47.826 0.00 0.00 0.00 3.67
5396 5647 3.581332 TCCCTCCGTCTCAAAATAAGTGT 59.419 43.478 0.00 0.00 0.00 3.55
5397 5648 4.184629 CTCCCTCCGTCTCAAAATAAGTG 58.815 47.826 0.00 0.00 0.00 3.16
5398 5649 3.838903 ACTCCCTCCGTCTCAAAATAAGT 59.161 43.478 0.00 0.00 0.00 2.24
5399 5650 4.473477 ACTCCCTCCGTCTCAAAATAAG 57.527 45.455 0.00 0.00 0.00 1.73
5400 5651 5.659525 TCATACTCCCTCCGTCTCAAAATAA 59.340 40.000 0.00 0.00 0.00 1.40
5401 5652 5.205821 TCATACTCCCTCCGTCTCAAAATA 58.794 41.667 0.00 0.00 0.00 1.40
5402 5653 4.030913 TCATACTCCCTCCGTCTCAAAAT 58.969 43.478 0.00 0.00 0.00 1.82
5403 5654 3.437213 TCATACTCCCTCCGTCTCAAAA 58.563 45.455 0.00 0.00 0.00 2.44
5404 5655 3.095912 TCATACTCCCTCCGTCTCAAA 57.904 47.619 0.00 0.00 0.00 2.69
5405 5656 2.820728 TCATACTCCCTCCGTCTCAA 57.179 50.000 0.00 0.00 0.00 3.02
5406 5657 2.820728 TTCATACTCCCTCCGTCTCA 57.179 50.000 0.00 0.00 0.00 3.27
5407 5658 3.223435 TGATTCATACTCCCTCCGTCTC 58.777 50.000 0.00 0.00 0.00 3.36
5408 5659 3.226777 CTGATTCATACTCCCTCCGTCT 58.773 50.000 0.00 0.00 0.00 4.18
5409 5660 2.297597 CCTGATTCATACTCCCTCCGTC 59.702 54.545 0.00 0.00 0.00 4.79
5410 5661 2.320781 CCTGATTCATACTCCCTCCGT 58.679 52.381 0.00 0.00 0.00 4.69
5411 5662 1.001406 GCCTGATTCATACTCCCTCCG 59.999 57.143 0.00 0.00 0.00 4.63
5412 5663 1.349357 GGCCTGATTCATACTCCCTCC 59.651 57.143 0.00 0.00 0.00 4.30
5413 5664 1.349357 GGGCCTGATTCATACTCCCTC 59.651 57.143 0.84 0.00 0.00 4.30
5414 5665 1.345422 TGGGCCTGATTCATACTCCCT 60.345 52.381 4.53 0.00 33.56 4.20
5415 5666 1.140312 TGGGCCTGATTCATACTCCC 58.860 55.000 4.53 0.00 0.00 4.30
5416 5667 1.771255 AGTGGGCCTGATTCATACTCC 59.229 52.381 4.53 0.00 0.00 3.85
5417 5668 3.471680 GAAGTGGGCCTGATTCATACTC 58.528 50.000 4.53 0.00 0.00 2.59
5418 5669 2.173569 GGAAGTGGGCCTGATTCATACT 59.826 50.000 4.53 0.00 0.00 2.12
5419 5670 2.173569 AGGAAGTGGGCCTGATTCATAC 59.826 50.000 4.53 0.00 33.59 2.39
5490 5743 6.183360 ACAAAGCTCTTATGATGGATTTGCTC 60.183 38.462 7.88 0.00 31.30 4.26
5501 5754 5.900425 TGTTTTGCAACAAAGCTCTTATGA 58.100 33.333 0.00 0.00 40.10 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.