Multiple sequence alignment - TraesCS3D01G053800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G053800 chr3D 100.000 2324 0 0 1 2324 22130950 22128627 0.000000e+00 4292.0
1 TraesCS3D01G053800 chr3A 92.222 810 43 7 1532 2322 31823796 31822988 0.000000e+00 1129.0
2 TraesCS3D01G053800 chr3A 90.160 437 22 3 614 1033 31824505 31824073 1.210000e-152 549.0
3 TraesCS3D01G053800 chr3A 91.321 265 18 3 1223 1484 31824065 31823803 7.900000e-95 357.0
4 TraesCS3D01G053800 chr3B 87.755 784 57 12 578 1336 39304739 39303970 0.000000e+00 880.0
5 TraesCS3D01G053800 chr3B 87.628 784 58 12 578 1336 39335739 39334970 0.000000e+00 874.0
6 TraesCS3D01G053800 chr3B 92.391 460 28 4 1866 2321 39303351 39302895 0.000000e+00 649.0
7 TraesCS3D01G053800 chr3B 92.391 460 28 4 1866 2321 39334353 39333897 0.000000e+00 649.0
8 TraesCS3D01G053800 chr3B 93.333 150 7 2 1335 1484 39334847 39334701 3.890000e-53 219.0
9 TraesCS3D01G053800 chr3B 92.667 150 8 2 1335 1484 39303847 39303701 1.810000e-51 213.0
10 TraesCS3D01G053800 chr3B 87.952 166 12 2 1532 1690 39303688 39303524 3.050000e-44 189.0
11 TraesCS3D01G053800 chr3B 87.952 166 12 2 1532 1690 39334688 39334524 3.050000e-44 189.0
12 TraesCS3D01G053800 chr7D 97.738 221 5 0 3 223 69853588 69853808 4.690000e-102 381.0
13 TraesCS3D01G053800 chr7D 82.447 188 27 3 235 420 176580620 176580803 2.390000e-35 159.0
14 TraesCS3D01G053800 chr7D 80.000 195 29 6 228 420 503013241 503013055 4.030000e-28 135.0
15 TraesCS3D01G053800 chr4A 93.450 229 13 2 3 229 45464971 45465199 2.860000e-89 339.0
16 TraesCS3D01G053800 chr4A 83.516 182 20 7 227 406 705295364 705295191 6.650000e-36 161.0
17 TraesCS3D01G053800 chr2B 82.258 248 33 7 225 466 209820485 209820727 1.090000e-48 204.0
18 TraesCS3D01G053800 chr2B 84.247 146 21 2 276 420 374254033 374253889 8.660000e-30 141.0
19 TraesCS3D01G053800 chr1D 80.786 229 32 7 3 225 364126536 364126314 3.970000e-38 169.0
20 TraesCS3D01G053800 chr1D 86.232 138 18 1 276 413 452004784 452004920 5.170000e-32 148.0
21 TraesCS3D01G053800 chr1B 81.675 191 24 9 233 420 633324598 633324416 5.170000e-32 148.0
22 TraesCS3D01G053800 chr5D 84.932 146 21 1 276 420 388058284 388058429 1.860000e-31 147.0
23 TraesCS3D01G053800 chr5D 80.357 168 28 5 57 222 306173490 306173654 3.140000e-24 122.0
24 TraesCS3D01G053800 chr5A 85.507 138 19 1 276 413 564705379 564705243 2.410000e-30 143.0
25 TraesCS3D01G053800 chr6A 81.283 187 24 7 237 420 601467381 601467203 8.660000e-30 141.0
26 TraesCS3D01G053800 chr4B 78.788 231 33 15 5 222 117059144 117058917 8.660000e-30 141.0
27 TraesCS3D01G053800 chr4D 91.111 45 2 2 225 267 469616778 469616822 2.490000e-05 60.2
28 TraesCS3D01G053800 chr5B 100.000 28 0 0 2116 2143 398385001 398385028 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G053800 chr3D 22128627 22130950 2323 True 4292.000000 4292 100.000000 1 2324 1 chr3D.!!$R1 2323
1 TraesCS3D01G053800 chr3A 31822988 31824505 1517 True 678.333333 1129 91.234333 614 2322 3 chr3A.!!$R1 1708
2 TraesCS3D01G053800 chr3B 39302895 39304739 1844 True 482.750000 880 90.191250 578 2321 4 chr3B.!!$R1 1743
3 TraesCS3D01G053800 chr3B 39333897 39335739 1842 True 482.750000 874 90.326000 578 2321 4 chr3B.!!$R2 1743

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
688 692 0.035152 TATGGGTGCCAACTCTGCAG 60.035 55.0 7.63 7.63 39.87 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1500 1663 0.323087 ACTCCAGCTCATGCAATGCA 60.323 50.0 11.44 11.44 46.21 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.747686 ATATAACGGGCCGGGCTG 59.252 61.111 33.66 33.66 0.00 4.85
18 19 3.546714 ATATAACGGGCCGGGCTGC 62.547 63.158 35.01 15.52 0.00 5.25
68 69 3.685592 GCAGCACGAGATCGACTG 58.314 61.111 18.81 18.81 43.95 3.51
69 70 1.137614 GCAGCACGAGATCGACTGA 59.862 57.895 23.92 0.00 43.90 3.41
70 71 1.136872 GCAGCACGAGATCGACTGAC 61.137 60.000 23.92 15.45 43.90 3.51
71 72 0.449786 CAGCACGAGATCGACTGACT 59.550 55.000 18.52 4.84 43.90 3.41
72 73 0.730265 AGCACGAGATCGACTGACTC 59.270 55.000 9.58 0.00 43.02 3.36
73 74 0.448197 GCACGAGATCGACTGACTCA 59.552 55.000 9.58 0.00 43.02 3.41
74 75 1.135660 GCACGAGATCGACTGACTCAA 60.136 52.381 9.58 0.00 43.02 3.02
75 76 2.668556 GCACGAGATCGACTGACTCAAA 60.669 50.000 9.58 0.00 43.02 2.69
76 77 3.565516 CACGAGATCGACTGACTCAAAA 58.434 45.455 9.58 0.00 43.02 2.44
77 78 3.362237 CACGAGATCGACTGACTCAAAAC 59.638 47.826 9.58 0.00 43.02 2.43
78 79 3.004419 ACGAGATCGACTGACTCAAAACA 59.996 43.478 9.58 0.00 43.02 2.83
79 80 3.362237 CGAGATCGACTGACTCAAAACAC 59.638 47.826 0.00 0.00 43.02 3.32
80 81 4.551388 GAGATCGACTGACTCAAAACACT 58.449 43.478 0.00 0.00 0.00 3.55
81 82 4.302455 AGATCGACTGACTCAAAACACTG 58.698 43.478 0.00 0.00 0.00 3.66
82 83 2.821546 TCGACTGACTCAAAACACTGG 58.178 47.619 0.00 0.00 0.00 4.00
83 84 1.261619 CGACTGACTCAAAACACTGGC 59.738 52.381 0.00 0.00 0.00 4.85
84 85 1.604278 GACTGACTCAAAACACTGGCC 59.396 52.381 0.00 0.00 0.00 5.36
85 86 1.064758 ACTGACTCAAAACACTGGCCA 60.065 47.619 4.71 4.71 0.00 5.36
86 87 1.605710 CTGACTCAAAACACTGGCCAG 59.394 52.381 31.60 31.60 0.00 4.85
87 88 1.064758 TGACTCAAAACACTGGCCAGT 60.065 47.619 33.20 33.20 43.61 4.00
88 89 1.604278 GACTCAAAACACTGGCCAGTC 59.396 52.381 35.79 17.33 40.20 3.51
89 90 0.588252 CTCAAAACACTGGCCAGTCG 59.412 55.000 35.79 29.24 40.20 4.18
90 91 0.179234 TCAAAACACTGGCCAGTCGA 59.821 50.000 35.79 22.00 40.20 4.20
91 92 0.307760 CAAAACACTGGCCAGTCGAC 59.692 55.000 35.79 7.70 40.20 4.20
92 93 1.157870 AAAACACTGGCCAGTCGACG 61.158 55.000 35.79 25.51 40.20 5.12
93 94 4.664677 ACACTGGCCAGTCGACGC 62.665 66.667 35.79 8.46 40.20 5.19
94 95 4.363990 CACTGGCCAGTCGACGCT 62.364 66.667 35.79 10.00 40.20 5.07
95 96 2.675423 ACTGGCCAGTCGACGCTA 60.675 61.111 33.20 5.61 36.92 4.26
96 97 2.103143 CTGGCCAGTCGACGCTAG 59.897 66.667 25.53 11.87 0.00 3.42
97 98 4.129737 TGGCCAGTCGACGCTAGC 62.130 66.667 10.46 4.06 0.00 3.42
98 99 3.827898 GGCCAGTCGACGCTAGCT 61.828 66.667 13.93 0.00 0.00 3.32
99 100 2.580867 GCCAGTCGACGCTAGCTG 60.581 66.667 13.93 9.03 0.00 4.24
100 101 2.103143 CCAGTCGACGCTAGCTGG 59.897 66.667 13.93 8.62 41.89 4.85
101 102 2.580867 CAGTCGACGCTAGCTGGC 60.581 66.667 12.81 12.81 0.00 4.85
102 103 3.827898 AGTCGACGCTAGCTGGCC 61.828 66.667 17.22 0.00 0.00 5.36
103 104 4.874977 GTCGACGCTAGCTGGCCC 62.875 72.222 17.22 7.73 0.00 5.80
105 106 4.227134 CGACGCTAGCTGGCCCAT 62.227 66.667 17.22 1.80 0.00 4.00
106 107 2.190578 GACGCTAGCTGGCCCATT 59.809 61.111 17.22 0.00 0.00 3.16
107 108 2.124570 ACGCTAGCTGGCCCATTG 60.125 61.111 17.22 4.35 0.00 2.82
108 109 2.190313 CGCTAGCTGGCCCATTGA 59.810 61.111 17.22 0.00 0.00 2.57
109 110 1.451927 CGCTAGCTGGCCCATTGAA 60.452 57.895 17.22 0.00 0.00 2.69
110 111 1.718757 CGCTAGCTGGCCCATTGAAC 61.719 60.000 17.22 0.00 0.00 3.18
111 112 1.387295 GCTAGCTGGCCCATTGAACC 61.387 60.000 11.66 0.00 0.00 3.62
112 113 1.077787 TAGCTGGCCCATTGAACCG 60.078 57.895 0.00 0.00 0.00 4.44
113 114 4.133796 GCTGGCCCATTGAACCGC 62.134 66.667 0.00 0.00 0.00 5.68
114 115 2.676121 CTGGCCCATTGAACCGCA 60.676 61.111 0.00 0.00 0.00 5.69
115 116 2.676121 TGGCCCATTGAACCGCAG 60.676 61.111 0.00 0.00 0.00 5.18
116 117 2.361104 GGCCCATTGAACCGCAGA 60.361 61.111 0.00 0.00 0.00 4.26
117 118 2.700773 GGCCCATTGAACCGCAGAC 61.701 63.158 0.00 0.00 0.00 3.51
118 119 2.700773 GCCCATTGAACCGCAGACC 61.701 63.158 0.00 0.00 0.00 3.85
119 120 2.398554 CCCATTGAACCGCAGACCG 61.399 63.158 0.00 0.00 0.00 4.79
120 121 2.480555 CATTGAACCGCAGACCGC 59.519 61.111 0.00 0.00 35.03 5.68
121 122 2.031919 ATTGAACCGCAGACCGCA 59.968 55.556 0.00 0.00 42.60 5.69
122 123 1.599518 ATTGAACCGCAGACCGCAA 60.600 52.632 0.00 0.00 42.60 4.85
123 124 0.960364 ATTGAACCGCAGACCGCAAT 60.960 50.000 0.00 0.00 42.60 3.56
124 125 1.573829 TTGAACCGCAGACCGCAATC 61.574 55.000 0.00 0.00 42.60 2.67
125 126 2.031919 AACCGCAGACCGCAATCA 59.968 55.556 0.00 0.00 42.60 2.57
126 127 1.573829 GAACCGCAGACCGCAATCAA 61.574 55.000 0.00 0.00 42.60 2.57
127 128 1.169661 AACCGCAGACCGCAATCAAA 61.170 50.000 0.00 0.00 42.60 2.69
128 129 1.169661 ACCGCAGACCGCAATCAAAA 61.170 50.000 0.00 0.00 42.60 2.44
129 130 0.039617 CCGCAGACCGCAATCAAAAA 60.040 50.000 0.00 0.00 42.60 1.94
152 153 6.801539 AAAGAATAAACAGAACGCATCTCA 57.198 33.333 0.00 0.00 35.73 3.27
153 154 6.801539 AAGAATAAACAGAACGCATCTCAA 57.198 33.333 0.00 0.00 35.73 3.02
154 155 6.801539 AGAATAAACAGAACGCATCTCAAA 57.198 33.333 0.00 0.00 35.73 2.69
155 156 6.835914 AGAATAAACAGAACGCATCTCAAAG 58.164 36.000 0.00 0.00 35.73 2.77
156 157 2.977405 AACAGAACGCATCTCAAAGC 57.023 45.000 0.00 0.00 35.73 3.51
157 158 1.882912 ACAGAACGCATCTCAAAGCA 58.117 45.000 0.00 0.00 35.73 3.91
158 159 2.221169 ACAGAACGCATCTCAAAGCAA 58.779 42.857 0.00 0.00 35.73 3.91
159 160 2.031682 ACAGAACGCATCTCAAAGCAAC 60.032 45.455 0.00 0.00 35.73 4.17
160 161 2.031769 CAGAACGCATCTCAAAGCAACA 60.032 45.455 0.00 0.00 35.73 3.33
161 162 2.816087 AGAACGCATCTCAAAGCAACAT 59.184 40.909 0.00 0.00 30.46 2.71
162 163 2.907910 ACGCATCTCAAAGCAACATC 57.092 45.000 0.00 0.00 0.00 3.06
163 164 1.470098 ACGCATCTCAAAGCAACATCC 59.530 47.619 0.00 0.00 0.00 3.51
164 165 1.469703 CGCATCTCAAAGCAACATCCA 59.530 47.619 0.00 0.00 0.00 3.41
165 166 2.095110 CGCATCTCAAAGCAACATCCAA 60.095 45.455 0.00 0.00 0.00 3.53
166 167 3.248266 GCATCTCAAAGCAACATCCAAC 58.752 45.455 0.00 0.00 0.00 3.77
167 168 3.495193 CATCTCAAAGCAACATCCAACG 58.505 45.455 0.00 0.00 0.00 4.10
168 169 1.879380 TCTCAAAGCAACATCCAACGG 59.121 47.619 0.00 0.00 0.00 4.44
169 170 1.879380 CTCAAAGCAACATCCAACGGA 59.121 47.619 0.00 0.00 35.55 4.69
170 171 1.606668 TCAAAGCAACATCCAACGGAC 59.393 47.619 0.00 0.00 32.98 4.79
171 172 0.958822 AAAGCAACATCCAACGGACC 59.041 50.000 0.00 0.00 32.98 4.46
172 173 0.179004 AAGCAACATCCAACGGACCA 60.179 50.000 0.00 0.00 32.98 4.02
173 174 0.606401 AGCAACATCCAACGGACCAG 60.606 55.000 0.00 0.00 32.98 4.00
174 175 0.605319 GCAACATCCAACGGACCAGA 60.605 55.000 0.00 0.00 32.98 3.86
175 176 1.890876 CAACATCCAACGGACCAGAA 58.109 50.000 0.00 0.00 32.98 3.02
176 177 2.226330 CAACATCCAACGGACCAGAAA 58.774 47.619 0.00 0.00 32.98 2.52
177 178 2.819608 CAACATCCAACGGACCAGAAAT 59.180 45.455 0.00 0.00 32.98 2.17
178 179 2.711542 ACATCCAACGGACCAGAAATC 58.288 47.619 0.00 0.00 32.98 2.17
179 180 1.665679 CATCCAACGGACCAGAAATCG 59.334 52.381 0.00 0.00 32.98 3.34
180 181 0.970640 TCCAACGGACCAGAAATCGA 59.029 50.000 0.00 0.00 0.00 3.59
181 182 1.076332 CCAACGGACCAGAAATCGAC 58.924 55.000 0.00 0.00 0.00 4.20
182 183 1.337823 CCAACGGACCAGAAATCGACT 60.338 52.381 0.00 0.00 0.00 4.18
183 184 1.726791 CAACGGACCAGAAATCGACTG 59.273 52.381 0.00 0.00 35.43 3.51
184 185 1.254026 ACGGACCAGAAATCGACTGA 58.746 50.000 3.24 0.00 37.54 3.41
185 186 1.067776 ACGGACCAGAAATCGACTGAC 60.068 52.381 3.24 0.00 37.54 3.51
186 187 1.630148 GGACCAGAAATCGACTGACG 58.370 55.000 3.24 0.00 44.09 4.35
187 188 0.992802 GACCAGAAATCGACTGACGC 59.007 55.000 3.24 0.00 42.26 5.19
188 189 0.317160 ACCAGAAATCGACTGACGCA 59.683 50.000 3.24 0.00 42.26 5.24
189 190 1.270094 ACCAGAAATCGACTGACGCAA 60.270 47.619 3.24 0.00 42.26 4.85
190 191 1.798223 CCAGAAATCGACTGACGCAAA 59.202 47.619 3.24 0.00 42.26 3.68
191 192 2.416547 CCAGAAATCGACTGACGCAAAT 59.583 45.455 3.24 0.00 42.26 2.32
192 193 3.410850 CAGAAATCGACTGACGCAAATG 58.589 45.455 0.00 0.00 42.26 2.32
193 194 3.067106 AGAAATCGACTGACGCAAATGT 58.933 40.909 0.00 0.00 42.26 2.71
194 195 3.498397 AGAAATCGACTGACGCAAATGTT 59.502 39.130 0.00 0.00 42.26 2.71
195 196 4.688879 AGAAATCGACTGACGCAAATGTTA 59.311 37.500 0.00 0.00 42.26 2.41
196 197 5.178623 AGAAATCGACTGACGCAAATGTTAA 59.821 36.000 0.00 0.00 42.26 2.01
197 198 5.351233 AATCGACTGACGCAAATGTTAAA 57.649 34.783 0.00 0.00 42.26 1.52
198 199 4.797693 TCGACTGACGCAAATGTTAAAA 57.202 36.364 0.00 0.00 42.26 1.52
199 200 4.520078 TCGACTGACGCAAATGTTAAAAC 58.480 39.130 0.00 0.00 42.26 2.43
200 201 4.271533 TCGACTGACGCAAATGTTAAAACT 59.728 37.500 0.00 0.00 42.26 2.66
201 202 4.607235 CGACTGACGCAAATGTTAAAACTC 59.393 41.667 0.00 0.00 34.51 3.01
202 203 5.493133 ACTGACGCAAATGTTAAAACTCA 57.507 34.783 0.00 0.00 0.00 3.41
203 204 5.510671 ACTGACGCAAATGTTAAAACTCAG 58.489 37.500 5.12 5.12 31.50 3.35
204 205 4.286910 TGACGCAAATGTTAAAACTCAGC 58.713 39.130 0.00 0.00 0.00 4.26
205 206 4.036262 TGACGCAAATGTTAAAACTCAGCT 59.964 37.500 0.00 0.00 0.00 4.24
206 207 4.290155 ACGCAAATGTTAAAACTCAGCTG 58.710 39.130 7.63 7.63 0.00 4.24
207 208 4.036262 ACGCAAATGTTAAAACTCAGCTGA 59.964 37.500 17.19 17.19 0.00 4.26
208 209 4.379793 CGCAAATGTTAAAACTCAGCTGAC 59.620 41.667 13.74 2.01 0.00 3.51
209 210 5.523369 GCAAATGTTAAAACTCAGCTGACT 58.477 37.500 13.74 0.15 0.00 3.41
210 211 5.400485 GCAAATGTTAAAACTCAGCTGACTG 59.600 40.000 13.74 6.89 45.95 3.51
220 221 3.998560 AGCTGACTGAGAGGTAGCT 57.001 52.632 0.00 0.00 39.71 3.32
222 223 3.593442 AGCTGACTGAGAGGTAGCTAT 57.407 47.619 0.00 0.00 42.45 2.97
223 224 3.909732 AGCTGACTGAGAGGTAGCTATT 58.090 45.455 0.00 0.00 42.45 1.73
224 225 4.285863 AGCTGACTGAGAGGTAGCTATTT 58.714 43.478 0.00 0.00 42.45 1.40
225 226 4.340950 AGCTGACTGAGAGGTAGCTATTTC 59.659 45.833 0.00 0.00 42.45 2.17
226 227 4.791411 GCTGACTGAGAGGTAGCTATTTCG 60.791 50.000 0.00 0.00 0.00 3.46
227 228 4.524053 TGACTGAGAGGTAGCTATTTCGA 58.476 43.478 0.00 0.00 0.00 3.71
228 229 4.948004 TGACTGAGAGGTAGCTATTTCGAA 59.052 41.667 0.00 0.00 0.00 3.71
229 230 5.066634 TGACTGAGAGGTAGCTATTTCGAAG 59.933 44.000 0.00 4.26 0.00 3.79
230 231 4.951094 ACTGAGAGGTAGCTATTTCGAAGT 59.049 41.667 0.00 0.00 0.00 3.01
231 232 5.419471 ACTGAGAGGTAGCTATTTCGAAGTT 59.581 40.000 0.00 0.00 0.00 2.66
232 233 5.651530 TGAGAGGTAGCTATTTCGAAGTTG 58.348 41.667 0.00 0.00 0.00 3.16
233 234 4.434520 AGAGGTAGCTATTTCGAAGTTGC 58.565 43.478 16.92 16.92 0.00 4.17
234 235 4.160626 AGAGGTAGCTATTTCGAAGTTGCT 59.839 41.667 26.63 26.63 34.92 3.91
235 236 4.434520 AGGTAGCTATTTCGAAGTTGCTC 58.565 43.478 27.07 19.25 32.72 4.26
236 237 4.081642 AGGTAGCTATTTCGAAGTTGCTCA 60.082 41.667 27.07 14.35 32.72 4.26
237 238 4.033014 GGTAGCTATTTCGAAGTTGCTCAC 59.967 45.833 27.07 21.71 32.72 3.51
238 239 3.664107 AGCTATTTCGAAGTTGCTCACA 58.336 40.909 20.45 0.00 0.00 3.58
239 240 4.256920 AGCTATTTCGAAGTTGCTCACAT 58.743 39.130 20.45 2.56 0.00 3.21
240 241 5.419542 AGCTATTTCGAAGTTGCTCACATA 58.580 37.500 20.45 2.68 0.00 2.29
241 242 5.292101 AGCTATTTCGAAGTTGCTCACATAC 59.708 40.000 20.45 0.00 0.00 2.39
242 243 5.063438 GCTATTTCGAAGTTGCTCACATACA 59.937 40.000 17.25 0.00 0.00 2.29
243 244 4.725556 TTTCGAAGTTGCTCACATACAC 57.274 40.909 0.00 0.00 0.00 2.90
244 245 2.324860 TCGAAGTTGCTCACATACACG 58.675 47.619 0.00 0.00 0.00 4.49
245 246 2.030628 TCGAAGTTGCTCACATACACGA 60.031 45.455 0.00 0.00 0.00 4.35
246 247 2.342651 CGAAGTTGCTCACATACACGAG 59.657 50.000 0.00 0.00 0.00 4.18
254 255 4.033990 CTCACATACACGAGCATACACT 57.966 45.455 0.00 0.00 0.00 3.55
255 256 4.028852 TCACATACACGAGCATACACTC 57.971 45.455 0.00 0.00 0.00 3.51
256 257 3.442273 TCACATACACGAGCATACACTCA 59.558 43.478 0.00 0.00 36.42 3.41
257 258 3.547868 CACATACACGAGCATACACTCAC 59.452 47.826 0.00 0.00 36.42 3.51
258 259 2.933495 TACACGAGCATACACTCACC 57.067 50.000 0.00 0.00 36.42 4.02
259 260 0.966179 ACACGAGCATACACTCACCA 59.034 50.000 0.00 0.00 36.42 4.17
260 261 1.550524 ACACGAGCATACACTCACCAT 59.449 47.619 0.00 0.00 36.42 3.55
261 262 2.758423 ACACGAGCATACACTCACCATA 59.242 45.455 0.00 0.00 36.42 2.74
262 263 3.384789 ACACGAGCATACACTCACCATAT 59.615 43.478 0.00 0.00 36.42 1.78
263 264 3.737774 CACGAGCATACACTCACCATATG 59.262 47.826 0.00 0.00 36.42 1.78
264 265 3.636764 ACGAGCATACACTCACCATATGA 59.363 43.478 3.65 0.00 36.42 2.15
265 266 4.099419 ACGAGCATACACTCACCATATGAA 59.901 41.667 3.65 0.00 36.69 2.57
266 267 4.445718 CGAGCATACACTCACCATATGAAC 59.554 45.833 3.65 0.00 36.69 3.18
267 268 4.371786 AGCATACACTCACCATATGAACG 58.628 43.478 3.65 0.00 36.69 3.95
268 269 3.059597 GCATACACTCACCATATGAACGC 60.060 47.826 3.65 0.00 36.69 4.84
269 270 2.760634 ACACTCACCATATGAACGCA 57.239 45.000 3.65 0.00 36.69 5.24
270 271 2.346803 ACACTCACCATATGAACGCAC 58.653 47.619 3.65 0.00 36.69 5.34
271 272 1.324435 CACTCACCATATGAACGCACG 59.676 52.381 3.65 0.00 36.69 5.34
272 273 1.067142 ACTCACCATATGAACGCACGT 60.067 47.619 3.65 0.00 36.69 4.49
273 274 1.324435 CTCACCATATGAACGCACGTG 59.676 52.381 12.28 12.28 36.69 4.49
274 275 1.075542 CACCATATGAACGCACGTGT 58.924 50.000 18.38 0.00 0.00 4.49
275 276 1.075542 ACCATATGAACGCACGTGTG 58.924 50.000 26.70 26.70 0.00 3.82
290 291 4.763593 GTGCACACACACACACAC 57.236 55.556 13.17 0.00 46.61 3.82
291 292 2.170738 GTGCACACACACACACACT 58.829 52.632 13.17 0.00 46.61 3.55
292 293 1.364721 GTGCACACACACACACACTA 58.635 50.000 13.17 0.00 46.61 2.74
293 294 1.062002 GTGCACACACACACACACTAC 59.938 52.381 13.17 0.00 46.61 2.73
294 295 0.655733 GCACACACACACACACTACC 59.344 55.000 0.00 0.00 0.00 3.18
295 296 1.742411 GCACACACACACACACTACCT 60.742 52.381 0.00 0.00 0.00 3.08
296 297 2.201732 CACACACACACACACTACCTC 58.798 52.381 0.00 0.00 0.00 3.85
297 298 2.108168 ACACACACACACACTACCTCT 58.892 47.619 0.00 0.00 0.00 3.69
298 299 3.067601 CACACACACACACACTACCTCTA 59.932 47.826 0.00 0.00 0.00 2.43
299 300 3.895656 ACACACACACACACTACCTCTAT 59.104 43.478 0.00 0.00 0.00 1.98
300 301 4.237724 CACACACACACACTACCTCTATG 58.762 47.826 0.00 0.00 0.00 2.23
301 302 4.022329 CACACACACACACTACCTCTATGA 60.022 45.833 0.00 0.00 0.00 2.15
302 303 4.218635 ACACACACACACTACCTCTATGAG 59.781 45.833 0.00 0.00 0.00 2.90
303 304 3.193691 ACACACACACTACCTCTATGAGC 59.806 47.826 0.00 0.00 0.00 4.26
304 305 3.193479 CACACACACTACCTCTATGAGCA 59.807 47.826 0.00 0.00 0.00 4.26
305 306 3.193691 ACACACACTACCTCTATGAGCAC 59.806 47.826 0.00 0.00 0.00 4.40
306 307 2.761208 ACACACTACCTCTATGAGCACC 59.239 50.000 0.00 0.00 0.00 5.01
307 308 3.027412 CACACTACCTCTATGAGCACCT 58.973 50.000 0.00 0.00 0.00 4.00
308 309 3.449018 CACACTACCTCTATGAGCACCTT 59.551 47.826 0.00 0.00 0.00 3.50
309 310 3.702045 ACACTACCTCTATGAGCACCTTC 59.298 47.826 0.00 0.00 0.00 3.46
310 311 2.952978 ACTACCTCTATGAGCACCTTCG 59.047 50.000 0.00 0.00 0.00 3.79
311 312 2.145397 ACCTCTATGAGCACCTTCGA 57.855 50.000 0.00 0.00 0.00 3.71
312 313 2.028130 ACCTCTATGAGCACCTTCGAG 58.972 52.381 0.00 0.00 0.00 4.04
313 314 1.339610 CCTCTATGAGCACCTTCGAGG 59.660 57.143 0.00 0.00 42.49 4.63
314 315 2.302260 CTCTATGAGCACCTTCGAGGA 58.698 52.381 7.76 0.00 37.67 3.71
315 316 2.690497 CTCTATGAGCACCTTCGAGGAA 59.310 50.000 7.76 0.00 37.67 3.36
316 317 2.427453 TCTATGAGCACCTTCGAGGAAC 59.573 50.000 7.76 0.49 37.67 3.62
318 319 0.318441 TGAGCACCTTCGAGGAACTG 59.682 55.000 7.76 0.00 41.55 3.16
319 320 0.603569 GAGCACCTTCGAGGAACTGA 59.396 55.000 7.76 0.00 41.55 3.41
320 321 0.605589 AGCACCTTCGAGGAACTGAG 59.394 55.000 7.76 0.00 41.55 3.35
321 322 1.016653 GCACCTTCGAGGAACTGAGC 61.017 60.000 7.76 0.00 41.55 4.26
322 323 0.390472 CACCTTCGAGGAACTGAGCC 60.390 60.000 7.76 0.00 41.55 4.70
323 324 1.153745 CCTTCGAGGAACTGAGCCG 60.154 63.158 0.00 0.00 41.55 5.52
324 325 1.153745 CTTCGAGGAACTGAGCCGG 60.154 63.158 0.00 0.00 41.55 6.13
325 326 3.296709 TTCGAGGAACTGAGCCGGC 62.297 63.158 21.89 21.89 41.55 6.13
326 327 4.069232 CGAGGAACTGAGCCGGCA 62.069 66.667 31.54 7.98 41.55 5.69
327 328 2.435059 GAGGAACTGAGCCGGCAC 60.435 66.667 31.54 24.60 41.55 5.01
328 329 3.240134 GAGGAACTGAGCCGGCACA 62.240 63.158 31.54 28.20 41.55 4.57
329 330 2.045926 GGAACTGAGCCGGCACAT 60.046 61.111 31.54 15.16 0.00 3.21
330 331 2.109126 GGAACTGAGCCGGCACATC 61.109 63.158 31.54 22.74 0.00 3.06
331 332 1.375908 GAACTGAGCCGGCACATCA 60.376 57.895 31.54 22.44 0.00 3.07
332 333 0.745845 GAACTGAGCCGGCACATCAT 60.746 55.000 31.54 16.99 0.00 2.45
333 334 0.745845 AACTGAGCCGGCACATCATC 60.746 55.000 31.54 16.99 0.00 2.92
334 335 1.145598 CTGAGCCGGCACATCATCT 59.854 57.895 31.54 4.27 0.00 2.90
335 336 0.463295 CTGAGCCGGCACATCATCTT 60.463 55.000 31.54 3.33 0.00 2.40
336 337 0.745486 TGAGCCGGCACATCATCTTG 60.745 55.000 31.54 0.00 0.00 3.02
337 338 0.462581 GAGCCGGCACATCATCTTGA 60.463 55.000 31.54 0.00 0.00 3.02
338 339 0.463295 AGCCGGCACATCATCTTGAG 60.463 55.000 31.54 0.00 0.00 3.02
339 340 0.462581 GCCGGCACATCATCTTGAGA 60.463 55.000 24.80 0.00 0.00 3.27
340 341 1.813092 GCCGGCACATCATCTTGAGAT 60.813 52.381 24.80 0.00 34.56 2.75
341 342 2.569059 CCGGCACATCATCTTGAGATT 58.431 47.619 0.00 0.00 31.21 2.40
342 343 2.289820 CCGGCACATCATCTTGAGATTG 59.710 50.000 0.00 0.00 31.21 2.67
343 344 3.200483 CGGCACATCATCTTGAGATTGA 58.800 45.455 0.90 0.00 31.21 2.57
344 345 3.813724 CGGCACATCATCTTGAGATTGAT 59.186 43.478 0.90 1.64 31.21 2.57
345 346 4.319549 CGGCACATCATCTTGAGATTGATG 60.320 45.833 19.97 19.97 41.02 3.07
353 354 6.111382 TCATCTTGAGATTGATGAAGTCACC 58.889 40.000 3.55 0.00 43.90 4.02
354 355 4.498241 TCTTGAGATTGATGAAGTCACCG 58.502 43.478 0.00 0.00 36.32 4.94
355 356 2.621338 TGAGATTGATGAAGTCACCGC 58.379 47.619 0.00 0.00 36.32 5.68
356 357 2.028203 TGAGATTGATGAAGTCACCGCA 60.028 45.455 0.00 0.00 36.32 5.69
357 358 2.606725 GAGATTGATGAAGTCACCGCAG 59.393 50.000 0.00 0.00 36.32 5.18
358 359 2.234661 AGATTGATGAAGTCACCGCAGA 59.765 45.455 0.00 0.00 36.32 4.26
359 360 1.795768 TTGATGAAGTCACCGCAGAC 58.204 50.000 0.00 0.00 36.32 3.51
360 361 0.678950 TGATGAAGTCACCGCAGACA 59.321 50.000 7.98 0.00 40.98 3.41
361 362 1.071605 GATGAAGTCACCGCAGACAC 58.928 55.000 7.98 3.14 40.98 3.67
362 363 0.320771 ATGAAGTCACCGCAGACACC 60.321 55.000 7.98 0.90 40.98 4.16
363 364 1.367840 GAAGTCACCGCAGACACCT 59.632 57.895 7.98 0.00 40.98 4.00
364 365 0.249911 GAAGTCACCGCAGACACCTT 60.250 55.000 7.98 0.00 40.98 3.50
365 366 0.249911 AAGTCACCGCAGACACCTTC 60.250 55.000 7.98 0.00 40.98 3.46
366 367 2.022129 GTCACCGCAGACACCTTCG 61.022 63.158 1.19 0.00 38.40 3.79
367 368 2.029073 CACCGCAGACACCTTCGT 59.971 61.111 0.00 0.00 0.00 3.85
368 369 1.174078 TCACCGCAGACACCTTCGTA 61.174 55.000 0.00 0.00 0.00 3.43
369 370 0.732880 CACCGCAGACACCTTCGTAG 60.733 60.000 0.00 0.00 0.00 3.51
370 371 1.177256 ACCGCAGACACCTTCGTAGT 61.177 55.000 0.00 0.00 0.00 2.73
371 372 0.456312 CCGCAGACACCTTCGTAGTC 60.456 60.000 0.00 0.00 0.00 2.59
372 373 0.793478 CGCAGACACCTTCGTAGTCG 60.793 60.000 0.00 0.00 37.36 4.18
373 374 0.520404 GCAGACACCTTCGTAGTCGA 59.480 55.000 0.00 0.00 44.66 4.20
374 375 1.728502 GCAGACACCTTCGTAGTCGAC 60.729 57.143 7.70 7.70 46.03 4.20
375 376 1.534163 CAGACACCTTCGTAGTCGACA 59.466 52.381 19.50 0.48 46.03 4.35
376 377 1.805345 AGACACCTTCGTAGTCGACAG 59.195 52.381 19.50 8.82 46.03 3.51
377 378 0.879765 ACACCTTCGTAGTCGACAGG 59.120 55.000 19.50 17.13 46.03 4.00
378 379 1.162698 CACCTTCGTAGTCGACAGGA 58.837 55.000 21.93 13.90 46.03 3.86
379 380 1.538512 CACCTTCGTAGTCGACAGGAA 59.461 52.381 21.93 18.87 46.03 3.36
380 381 1.538950 ACCTTCGTAGTCGACAGGAAC 59.461 52.381 21.93 11.75 46.03 3.62
381 382 1.538512 CCTTCGTAGTCGACAGGAACA 59.461 52.381 19.50 1.04 46.03 3.18
382 383 2.163815 CCTTCGTAGTCGACAGGAACAT 59.836 50.000 19.50 0.00 46.03 2.71
383 384 3.427243 CTTCGTAGTCGACAGGAACATC 58.573 50.000 19.50 0.00 46.03 3.06
384 385 2.708051 TCGTAGTCGACAGGAACATCT 58.292 47.619 19.50 0.00 41.35 2.90
385 386 2.676839 TCGTAGTCGACAGGAACATCTC 59.323 50.000 19.50 0.00 41.35 2.75
386 387 2.223294 CGTAGTCGACAGGAACATCTCC 60.223 54.545 19.50 0.00 41.25 3.71
388 389 6.258036 CGTAGTCGACAGGAACATCTCCTC 62.258 54.167 19.50 0.00 45.93 3.71
397 398 3.875125 GGAACATCTCCTCCCACTTAAC 58.125 50.000 0.00 0.00 41.61 2.01
398 399 3.522553 GAACATCTCCTCCCACTTAACG 58.477 50.000 0.00 0.00 0.00 3.18
399 400 1.207329 ACATCTCCTCCCACTTAACGC 59.793 52.381 0.00 0.00 0.00 4.84
400 401 1.482593 CATCTCCTCCCACTTAACGCT 59.517 52.381 0.00 0.00 0.00 5.07
401 402 1.183549 TCTCCTCCCACTTAACGCTC 58.816 55.000 0.00 0.00 0.00 5.03
402 403 0.895530 CTCCTCCCACTTAACGCTCA 59.104 55.000 0.00 0.00 0.00 4.26
403 404 1.482593 CTCCTCCCACTTAACGCTCAT 59.517 52.381 0.00 0.00 0.00 2.90
404 405 1.480954 TCCTCCCACTTAACGCTCATC 59.519 52.381 0.00 0.00 0.00 2.92
405 406 1.560923 CTCCCACTTAACGCTCATCG 58.439 55.000 0.00 0.00 45.38 3.84
406 407 0.459585 TCCCACTTAACGCTCATCGC 60.460 55.000 0.00 0.00 43.23 4.58
407 408 1.429148 CCCACTTAACGCTCATCGCC 61.429 60.000 0.00 0.00 43.23 5.54
408 409 1.631072 CACTTAACGCTCATCGCCG 59.369 57.895 0.00 0.00 43.23 6.46
409 410 1.518572 ACTTAACGCTCATCGCCGG 60.519 57.895 0.00 0.00 43.23 6.13
410 411 1.226859 CTTAACGCTCATCGCCGGA 60.227 57.895 5.05 0.00 43.23 5.14
411 412 0.804544 CTTAACGCTCATCGCCGGAA 60.805 55.000 5.05 0.00 43.23 4.30
412 413 0.390078 TTAACGCTCATCGCCGGAAA 60.390 50.000 5.05 0.00 43.23 3.13
413 414 0.804544 TAACGCTCATCGCCGGAAAG 60.805 55.000 5.05 0.00 43.23 2.62
414 415 3.929948 CGCTCATCGCCGGAAAGC 61.930 66.667 5.05 4.67 33.81 3.51
415 416 2.512515 GCTCATCGCCGGAAAGCT 60.513 61.111 5.05 0.00 34.15 3.74
416 417 2.817423 GCTCATCGCCGGAAAGCTG 61.817 63.158 5.05 0.00 34.15 4.24
417 418 1.153568 CTCATCGCCGGAAAGCTGA 60.154 57.895 5.05 1.75 0.00 4.26
418 419 0.740868 CTCATCGCCGGAAAGCTGAA 60.741 55.000 5.05 0.00 0.00 3.02
419 420 0.321210 TCATCGCCGGAAAGCTGAAA 60.321 50.000 5.05 0.00 0.00 2.69
420 421 0.521291 CATCGCCGGAAAGCTGAAAA 59.479 50.000 5.05 0.00 0.00 2.29
421 422 0.521735 ATCGCCGGAAAGCTGAAAAC 59.478 50.000 5.05 0.00 0.00 2.43
422 423 0.534203 TCGCCGGAAAGCTGAAAACT 60.534 50.000 5.05 0.00 0.00 2.66
423 424 0.110192 CGCCGGAAAGCTGAAAACTC 60.110 55.000 5.05 0.00 0.00 3.01
424 425 1.239347 GCCGGAAAGCTGAAAACTCT 58.761 50.000 5.05 0.00 0.00 3.24
425 426 1.068954 GCCGGAAAGCTGAAAACTCTG 60.069 52.381 5.05 0.00 0.00 3.35
426 427 2.494059 CCGGAAAGCTGAAAACTCTGA 58.506 47.619 0.00 0.00 0.00 3.27
427 428 3.077359 CCGGAAAGCTGAAAACTCTGAT 58.923 45.455 0.00 0.00 0.00 2.90
428 429 3.120060 CCGGAAAGCTGAAAACTCTGATG 60.120 47.826 0.00 0.00 0.00 3.07
429 430 3.748048 CGGAAAGCTGAAAACTCTGATGA 59.252 43.478 0.00 0.00 0.00 2.92
430 431 4.142945 CGGAAAGCTGAAAACTCTGATGAG 60.143 45.833 0.00 0.00 45.43 2.90
431 432 4.379290 GGAAAGCTGAAAACTCTGATGAGC 60.379 45.833 0.00 0.00 43.85 4.26
432 433 3.699411 AGCTGAAAACTCTGATGAGCT 57.301 42.857 0.00 0.00 43.85 4.09
433 434 3.336468 AGCTGAAAACTCTGATGAGCTG 58.664 45.455 0.00 0.00 43.85 4.24
434 435 2.419324 GCTGAAAACTCTGATGAGCTGG 59.581 50.000 0.00 0.00 43.85 4.85
435 436 3.008330 CTGAAAACTCTGATGAGCTGGG 58.992 50.000 0.00 0.00 43.85 4.45
436 437 2.290514 TGAAAACTCTGATGAGCTGGGG 60.291 50.000 0.00 0.00 43.85 4.96
437 438 1.661463 AAACTCTGATGAGCTGGGGA 58.339 50.000 0.00 0.00 43.85 4.81
438 439 1.890552 AACTCTGATGAGCTGGGGAT 58.109 50.000 0.00 0.00 43.85 3.85
439 440 2.783379 ACTCTGATGAGCTGGGGATA 57.217 50.000 0.00 0.00 43.85 2.59
440 441 2.324541 ACTCTGATGAGCTGGGGATAC 58.675 52.381 0.00 0.00 43.85 2.24
441 442 1.622811 CTCTGATGAGCTGGGGATACC 59.377 57.143 0.00 0.00 45.07 2.73
442 443 3.023545 CTCTGATGAGCTGGGGATACCA 61.024 54.545 0.00 0.00 46.67 3.25
443 444 5.127833 CTCTGATGAGCTGGGGATACCAC 62.128 56.522 0.00 0.00 46.67 4.16
455 456 3.180891 GGATACCACTGTGCTCCTAAC 57.819 52.381 1.29 0.00 0.00 2.34
456 457 2.158943 GGATACCACTGTGCTCCTAACC 60.159 54.545 1.29 0.00 0.00 2.85
457 458 2.018355 TACCACTGTGCTCCTAACCA 57.982 50.000 1.29 0.00 0.00 3.67
458 459 1.362224 ACCACTGTGCTCCTAACCAT 58.638 50.000 1.29 0.00 0.00 3.55
459 460 2.546899 ACCACTGTGCTCCTAACCATA 58.453 47.619 1.29 0.00 0.00 2.74
460 461 2.236395 ACCACTGTGCTCCTAACCATAC 59.764 50.000 1.29 0.00 0.00 2.39
461 462 2.236146 CCACTGTGCTCCTAACCATACA 59.764 50.000 1.29 0.00 0.00 2.29
462 463 3.262420 CACTGTGCTCCTAACCATACAC 58.738 50.000 0.00 0.00 0.00 2.90
463 464 2.236395 ACTGTGCTCCTAACCATACACC 59.764 50.000 0.00 0.00 0.00 4.16
464 465 2.236146 CTGTGCTCCTAACCATACACCA 59.764 50.000 0.00 0.00 0.00 4.17
465 466 2.027561 TGTGCTCCTAACCATACACCAC 60.028 50.000 0.00 0.00 0.00 4.16
466 467 2.027561 GTGCTCCTAACCATACACCACA 60.028 50.000 0.00 0.00 0.00 4.17
467 468 2.843730 TGCTCCTAACCATACACCACAT 59.156 45.455 0.00 0.00 0.00 3.21
468 469 3.206150 GCTCCTAACCATACACCACATG 58.794 50.000 0.00 0.00 0.00 3.21
469 470 3.370527 GCTCCTAACCATACACCACATGT 60.371 47.826 0.00 0.00 46.06 3.21
470 471 4.843728 CTCCTAACCATACACCACATGTT 58.156 43.478 0.00 0.00 43.19 2.71
471 472 4.584874 TCCTAACCATACACCACATGTTG 58.415 43.478 0.00 0.00 43.19 3.33
472 473 4.287326 TCCTAACCATACACCACATGTTGA 59.713 41.667 3.55 0.00 43.19 3.18
473 474 5.045213 TCCTAACCATACACCACATGTTGAT 60.045 40.000 3.55 0.00 43.19 2.57
474 475 5.066375 CCTAACCATACACCACATGTTGATG 59.934 44.000 3.55 1.67 43.19 3.07
475 476 2.754552 ACCATACACCACATGTTGATGC 59.245 45.455 3.55 0.00 43.19 3.91
476 477 2.223317 CCATACACCACATGTTGATGCG 60.223 50.000 3.55 0.00 43.19 4.73
477 478 0.801872 TACACCACATGTTGATGCGC 59.198 50.000 0.00 0.00 43.19 6.09
478 479 1.171549 ACACCACATGTTGATGCGCA 61.172 50.000 14.96 14.96 38.98 6.09
479 480 0.455464 CACCACATGTTGATGCGCAG 60.455 55.000 18.32 1.98 32.14 5.18
480 481 0.890542 ACCACATGTTGATGCGCAGT 60.891 50.000 18.32 2.76 32.14 4.40
481 482 0.241749 CCACATGTTGATGCGCAGTT 59.758 50.000 18.32 0.00 32.14 3.16
482 483 1.333115 CACATGTTGATGCGCAGTTG 58.667 50.000 18.32 9.17 32.14 3.16
483 484 1.069091 CACATGTTGATGCGCAGTTGA 60.069 47.619 18.32 0.00 32.14 3.18
484 485 1.608109 ACATGTTGATGCGCAGTTGAA 59.392 42.857 18.32 0.00 32.14 2.69
485 486 2.034432 ACATGTTGATGCGCAGTTGAAA 59.966 40.909 18.32 2.40 32.14 2.69
486 487 3.247442 CATGTTGATGCGCAGTTGAAAT 58.753 40.909 18.32 2.11 0.00 2.17
487 488 3.367992 TGTTGATGCGCAGTTGAAATT 57.632 38.095 18.32 0.00 0.00 1.82
488 489 3.715495 TGTTGATGCGCAGTTGAAATTT 58.285 36.364 18.32 0.00 0.00 1.82
489 490 4.118410 TGTTGATGCGCAGTTGAAATTTT 58.882 34.783 18.32 0.00 0.00 1.82
490 491 5.284864 TGTTGATGCGCAGTTGAAATTTTA 58.715 33.333 18.32 0.00 0.00 1.52
491 492 5.750547 TGTTGATGCGCAGTTGAAATTTTAA 59.249 32.000 18.32 0.00 0.00 1.52
492 493 5.820926 TGATGCGCAGTTGAAATTTTAAC 57.179 34.783 18.32 15.93 0.00 2.01
493 494 5.527951 TGATGCGCAGTTGAAATTTTAACT 58.472 33.333 19.52 19.52 37.61 2.24
494 495 6.673106 TGATGCGCAGTTGAAATTTTAACTA 58.327 32.000 23.30 11.82 35.50 2.24
495 496 7.142021 TGATGCGCAGTTGAAATTTTAACTAA 58.858 30.769 23.30 12.63 35.50 2.24
496 497 7.812191 TGATGCGCAGTTGAAATTTTAACTAAT 59.188 29.630 23.30 15.78 35.50 1.73
497 498 7.938563 TGCGCAGTTGAAATTTTAACTAATT 57.061 28.000 23.30 4.20 35.50 1.40
498 499 8.002433 TGCGCAGTTGAAATTTTAACTAATTC 57.998 30.769 23.30 14.76 35.50 2.17
499 500 7.149047 TGCGCAGTTGAAATTTTAACTAATTCG 60.149 33.333 23.30 21.89 35.50 3.34
500 501 7.060174 GCGCAGTTGAAATTTTAACTAATTCGA 59.940 33.333 23.30 0.00 35.50 3.71
501 502 9.061610 CGCAGTTGAAATTTTAACTAATTCGAT 57.938 29.630 23.30 1.98 35.50 3.59
526 527 3.746045 AAAGAGAAGCAGGTACGAACA 57.254 42.857 0.00 0.00 0.00 3.18
527 528 3.305398 AAGAGAAGCAGGTACGAACAG 57.695 47.619 0.00 0.00 0.00 3.16
528 529 2.515854 AGAGAAGCAGGTACGAACAGA 58.484 47.619 0.00 0.00 0.00 3.41
529 530 3.093057 AGAGAAGCAGGTACGAACAGAT 58.907 45.455 0.00 0.00 0.00 2.90
530 531 3.129638 AGAGAAGCAGGTACGAACAGATC 59.870 47.826 0.00 0.00 0.00 2.75
531 532 2.166664 AGAAGCAGGTACGAACAGATCC 59.833 50.000 0.00 0.00 0.00 3.36
532 533 1.557099 AGCAGGTACGAACAGATCCA 58.443 50.000 0.00 0.00 0.00 3.41
533 534 1.899814 AGCAGGTACGAACAGATCCAA 59.100 47.619 0.00 0.00 0.00 3.53
534 535 2.000447 GCAGGTACGAACAGATCCAAC 59.000 52.381 0.00 0.00 0.00 3.77
535 536 2.353803 GCAGGTACGAACAGATCCAACT 60.354 50.000 0.00 0.00 0.00 3.16
536 537 3.864921 GCAGGTACGAACAGATCCAACTT 60.865 47.826 0.00 0.00 0.00 2.66
537 538 4.315803 CAGGTACGAACAGATCCAACTTT 58.684 43.478 0.00 0.00 0.00 2.66
538 539 4.755123 CAGGTACGAACAGATCCAACTTTT 59.245 41.667 0.00 0.00 0.00 2.27
539 540 5.238650 CAGGTACGAACAGATCCAACTTTTT 59.761 40.000 0.00 0.00 0.00 1.94
561 562 7.611821 TTTTTCAAACTAATAAAAGTCCGCG 57.388 32.000 0.00 0.00 0.00 6.46
562 563 6.542574 TTTCAAACTAATAAAAGTCCGCGA 57.457 33.333 8.23 0.00 0.00 5.87
563 564 5.520022 TCAAACTAATAAAAGTCCGCGAC 57.480 39.130 8.23 3.80 0.00 5.19
564 565 4.989797 TCAAACTAATAAAAGTCCGCGACA 59.010 37.500 8.23 0.00 34.60 4.35
565 566 5.466058 TCAAACTAATAAAAGTCCGCGACAA 59.534 36.000 8.23 0.00 34.60 3.18
566 567 6.148150 TCAAACTAATAAAAGTCCGCGACAAT 59.852 34.615 8.23 0.00 34.60 2.71
567 568 7.331440 TCAAACTAATAAAAGTCCGCGACAATA 59.669 33.333 8.23 0.00 34.60 1.90
568 569 7.599630 AACTAATAAAAGTCCGCGACAATAA 57.400 32.000 8.23 0.00 34.60 1.40
569 570 7.599630 ACTAATAAAAGTCCGCGACAATAAA 57.400 32.000 8.23 0.00 34.60 1.40
570 571 7.458677 ACTAATAAAAGTCCGCGACAATAAAC 58.541 34.615 8.23 0.00 34.60 2.01
571 572 5.866335 ATAAAAGTCCGCGACAATAAACA 57.134 34.783 8.23 0.00 34.60 2.83
572 573 3.806316 AAAGTCCGCGACAATAAACAG 57.194 42.857 8.23 0.00 34.60 3.16
573 574 2.736144 AGTCCGCGACAATAAACAGA 57.264 45.000 8.23 0.00 34.60 3.41
574 575 3.247006 AGTCCGCGACAATAAACAGAT 57.753 42.857 8.23 0.00 34.60 2.90
575 576 2.930040 AGTCCGCGACAATAAACAGATG 59.070 45.455 8.23 0.00 34.60 2.90
576 577 2.030457 GTCCGCGACAATAAACAGATGG 59.970 50.000 8.23 0.00 32.09 3.51
577 578 2.093921 TCCGCGACAATAAACAGATGGA 60.094 45.455 8.23 0.00 0.00 3.41
578 579 2.675844 CCGCGACAATAAACAGATGGAA 59.324 45.455 8.23 0.00 0.00 3.53
579 580 3.126171 CCGCGACAATAAACAGATGGAAA 59.874 43.478 8.23 0.00 0.00 3.13
580 581 4.378978 CCGCGACAATAAACAGATGGAAAA 60.379 41.667 8.23 0.00 0.00 2.29
581 582 5.150683 CGCGACAATAAACAGATGGAAAAA 58.849 37.500 0.00 0.00 0.00 1.94
601 602 2.021457 AGCCCATTGCATAACCGTAAC 58.979 47.619 0.00 0.00 44.83 2.50
607 608 4.156922 CCATTGCATAACCGTAACCTCAAA 59.843 41.667 0.00 0.00 0.00 2.69
649 653 1.815421 GCCACGGCAGATCGAATGT 60.815 57.895 2.36 0.00 41.49 2.71
656 660 0.804364 GCAGATCGAATGTGGTTGCA 59.196 50.000 0.00 0.00 0.00 4.08
668 672 1.285641 GGTTGCATTGTCCACCACG 59.714 57.895 0.00 0.00 0.00 4.94
669 673 1.452145 GGTTGCATTGTCCACCACGT 61.452 55.000 0.00 0.00 0.00 4.49
670 674 1.231221 GTTGCATTGTCCACCACGTA 58.769 50.000 0.00 0.00 0.00 3.57
671 675 1.810151 GTTGCATTGTCCACCACGTAT 59.190 47.619 0.00 0.00 0.00 3.06
688 692 0.035152 TATGGGTGCCAACTCTGCAG 60.035 55.000 7.63 7.63 39.87 4.41
703 707 5.298197 CTCTGCAGAGTTCGTTAGTTAGA 57.702 43.478 31.71 0.00 37.40 2.10
711 715 8.328864 GCAGAGTTCGTTAGTTAGATTTATTGG 58.671 37.037 0.00 0.00 0.00 3.16
724 728 0.810648 TTATTGGCCGAAAGCAGCAG 59.189 50.000 0.00 0.00 46.50 4.24
777 781 5.931441 GCTTAATTCGAGTCAGCCATAAT 57.069 39.130 1.71 0.00 0.00 1.28
906 911 1.270518 CGATCATCCAGTCCATCCACC 60.271 57.143 0.00 0.00 0.00 4.61
907 912 1.770658 GATCATCCAGTCCATCCACCA 59.229 52.381 0.00 0.00 0.00 4.17
908 913 0.911769 TCATCCAGTCCATCCACCAC 59.088 55.000 0.00 0.00 0.00 4.16
909 914 0.620030 CATCCAGTCCATCCACCACA 59.380 55.000 0.00 0.00 0.00 4.17
910 915 0.620556 ATCCAGTCCATCCACCACAC 59.379 55.000 0.00 0.00 0.00 3.82
911 916 1.002134 CCAGTCCATCCACCACACC 60.002 63.158 0.00 0.00 0.00 4.16
912 917 1.760527 CAGTCCATCCACCACACCA 59.239 57.895 0.00 0.00 0.00 4.17
913 918 0.606401 CAGTCCATCCACCACACCAC 60.606 60.000 0.00 0.00 0.00 4.16
914 919 1.059584 AGTCCATCCACCACACCACA 61.060 55.000 0.00 0.00 0.00 4.17
915 920 0.038166 GTCCATCCACCACACCACAT 59.962 55.000 0.00 0.00 0.00 3.21
1045 1077 1.156736 GGTTGTCGTTCTGGTCATGG 58.843 55.000 0.00 0.00 0.00 3.66
1075 1107 2.643232 GCTGGCAGCCTTTCCTTGG 61.643 63.158 28.87 0.00 34.48 3.61
1082 1114 1.600916 GCCTTTCCTTGGTGAGCGT 60.601 57.895 0.00 0.00 0.00 5.07
1134 1172 4.351938 CCGTCCACGCCGAACTCA 62.352 66.667 0.00 0.00 38.18 3.41
1141 1179 3.691342 CGCCGAACTCAGTGGGGA 61.691 66.667 0.00 0.00 37.89 4.81
1142 1180 2.266055 GCCGAACTCAGTGGGGAG 59.734 66.667 0.00 0.00 40.79 4.30
1149 1187 2.599281 TCAGTGGGGAGCGTCGAA 60.599 61.111 0.00 0.00 0.00 3.71
1333 1371 2.983030 TGCCATGACCAACGCACC 60.983 61.111 0.00 0.00 0.00 5.01
1374 1536 9.483916 TGAAATATGAATACGGTCGATAACATT 57.516 29.630 0.00 0.00 0.00 2.71
1386 1548 6.916387 CGGTCGATAACATTAATCGCCTATAT 59.084 38.462 13.17 0.00 37.69 0.86
1387 1549 7.096599 CGGTCGATAACATTAATCGCCTATATG 60.097 40.741 13.17 0.00 37.69 1.78
1468 1631 8.706322 TGAGCTGGAGTATGTATTGAGTATAA 57.294 34.615 0.00 0.00 0.00 0.98
1476 1639 8.474710 AGTATGTATTGAGTATAAGGACGGTT 57.525 34.615 0.00 0.00 0.00 4.44
1478 1641 9.538508 GTATGTATTGAGTATAAGGACGGTTTT 57.461 33.333 0.00 0.00 0.00 2.43
1480 1643 7.043565 TGTATTGAGTATAAGGACGGTTTTCC 58.956 38.462 0.00 0.00 35.66 3.13
1490 1653 4.576879 AGGACGGTTTTCCTTACTCATTC 58.423 43.478 0.00 0.00 44.22 2.67
1491 1654 4.286291 AGGACGGTTTTCCTTACTCATTCT 59.714 41.667 0.00 0.00 44.22 2.40
1492 1655 4.392138 GGACGGTTTTCCTTACTCATTCTG 59.608 45.833 0.00 0.00 37.95 3.02
1493 1656 4.969484 ACGGTTTTCCTTACTCATTCTGT 58.031 39.130 0.00 0.00 37.95 3.41
1494 1657 6.105397 ACGGTTTTCCTTACTCATTCTGTA 57.895 37.500 0.00 0.00 37.95 2.74
1495 1658 6.708285 ACGGTTTTCCTTACTCATTCTGTAT 58.292 36.000 0.00 0.00 37.95 2.29
1496 1659 7.166167 ACGGTTTTCCTTACTCATTCTGTATT 58.834 34.615 0.00 0.00 37.95 1.89
1497 1660 7.664318 ACGGTTTTCCTTACTCATTCTGTATTT 59.336 33.333 0.00 0.00 37.95 1.40
1498 1661 8.512138 CGGTTTTCCTTACTCATTCTGTATTTT 58.488 33.333 0.00 0.00 37.95 1.82
1516 1679 2.087501 TTTTGCATTGCATGAGCTGG 57.912 45.000 12.95 0.00 42.74 4.85
1517 1680 1.258676 TTTGCATTGCATGAGCTGGA 58.741 45.000 12.95 0.00 42.74 3.86
1518 1681 0.815095 TTGCATTGCATGAGCTGGAG 59.185 50.000 12.95 0.00 42.74 3.86
1519 1682 0.323087 TGCATTGCATGAGCTGGAGT 60.323 50.000 7.38 0.00 42.74 3.85
1520 1683 1.065272 TGCATTGCATGAGCTGGAGTA 60.065 47.619 7.38 0.00 42.74 2.59
1521 1684 2.228059 GCATTGCATGAGCTGGAGTAT 58.772 47.619 3.15 0.00 42.74 2.12
1522 1685 2.031069 GCATTGCATGAGCTGGAGTATG 60.031 50.000 3.15 0.00 42.74 2.39
1523 1686 3.211865 CATTGCATGAGCTGGAGTATGT 58.788 45.455 0.00 0.00 42.74 2.29
1524 1687 4.383173 CATTGCATGAGCTGGAGTATGTA 58.617 43.478 0.00 0.00 42.74 2.29
1525 1688 4.694760 TTGCATGAGCTGGAGTATGTAT 57.305 40.909 0.00 0.00 42.74 2.29
1526 1689 4.694760 TGCATGAGCTGGAGTATGTATT 57.305 40.909 0.00 0.00 42.74 1.89
1527 1690 5.039920 TGCATGAGCTGGAGTATGTATTT 57.960 39.130 0.00 0.00 42.74 1.40
1528 1691 6.173427 TGCATGAGCTGGAGTATGTATTTA 57.827 37.500 0.00 0.00 42.74 1.40
1529 1692 6.591001 TGCATGAGCTGGAGTATGTATTTAA 58.409 36.000 0.00 0.00 42.74 1.52
1530 1693 6.707608 TGCATGAGCTGGAGTATGTATTTAAG 59.292 38.462 0.00 0.00 42.74 1.85
1564 1727 3.056952 GCAACGAGCAATCCATTAGTG 57.943 47.619 0.00 0.00 44.79 2.74
1640 1810 9.687717 GATTTTGTATTTGTTTGTGTTTGACTG 57.312 29.630 0.00 0.00 0.00 3.51
1645 1815 0.247894 GTTTGTGTTTGACTGCGCGA 60.248 50.000 12.10 0.00 0.00 5.87
1686 1856 7.390996 AGAAGACGATAGAGAAATATAAGGCGA 59.609 37.037 0.00 0.00 41.38 5.54
1687 1857 7.450124 AGACGATAGAGAAATATAAGGCGAA 57.550 36.000 0.00 0.00 41.38 4.70
1688 1858 7.531716 AGACGATAGAGAAATATAAGGCGAAG 58.468 38.462 0.00 0.00 41.38 3.79
1702 1872 3.340727 CGAAGCCGGTCGATTAGTT 57.659 52.632 8.71 0.00 43.86 2.24
1703 1873 2.480224 CGAAGCCGGTCGATTAGTTA 57.520 50.000 8.71 0.00 43.86 2.24
1704 1874 2.382519 CGAAGCCGGTCGATTAGTTAG 58.617 52.381 8.71 0.00 43.86 2.34
1705 1875 2.032550 CGAAGCCGGTCGATTAGTTAGA 59.967 50.000 8.71 0.00 43.86 2.10
1706 1876 3.488047 CGAAGCCGGTCGATTAGTTAGAA 60.488 47.826 8.71 0.00 43.86 2.10
1707 1877 3.712091 AGCCGGTCGATTAGTTAGAAG 57.288 47.619 1.90 0.00 0.00 2.85
1708 1878 2.125685 GCCGGTCGATTAGTTAGAAGC 58.874 52.381 1.90 0.00 0.00 3.86
1709 1879 2.223758 GCCGGTCGATTAGTTAGAAGCT 60.224 50.000 1.90 0.00 0.00 3.74
1710 1880 3.004106 GCCGGTCGATTAGTTAGAAGCTA 59.996 47.826 1.90 0.00 0.00 3.32
1711 1881 4.498682 GCCGGTCGATTAGTTAGAAGCTAA 60.499 45.833 1.90 0.00 33.59 3.09
1712 1882 5.213675 CCGGTCGATTAGTTAGAAGCTAAG 58.786 45.833 0.00 0.00 32.72 2.18
1713 1883 4.676018 CGGTCGATTAGTTAGAAGCTAAGC 59.324 45.833 0.00 0.00 32.72 3.09
1752 1960 1.859080 GTGCGGTGCTAATGCTACTAC 59.141 52.381 0.00 0.00 40.48 2.73
1761 1969 4.120589 GCTAATGCTACTACGGCTCTTTT 58.879 43.478 0.00 0.00 36.03 2.27
1763 1971 5.276915 GCTAATGCTACTACGGCTCTTTTTC 60.277 44.000 0.00 0.00 36.03 2.29
1954 2221 5.394663 GCACATCTAGTCTAAAGAAGAGGCA 60.395 44.000 0.00 0.00 33.88 4.75
2009 2278 4.110036 TGTGTAGAATCCGTGTGATCAG 57.890 45.455 0.00 0.00 31.61 2.90
2042 2312 4.281435 TGATCCATCAGAAAAGCAAAAGCA 59.719 37.500 0.00 0.00 32.11 3.91
2144 2416 7.833786 TGTACCGAAATACTTGTAGTTGAGAT 58.166 34.615 0.00 0.00 0.00 2.75
2148 2420 8.746530 ACCGAAATACTTGTAGTTGAGATCTTA 58.253 33.333 0.00 0.00 0.00 2.10
2156 2428 9.688091 ACTTGTAGTTGAGATCTTATACAGAGA 57.312 33.333 0.00 0.00 33.87 3.10
2165 2437 9.332502 TGAGATCTTATACAGAGAGAGTACAAC 57.667 37.037 0.00 0.00 33.87 3.32
2198 2470 4.804139 CACGTGCTAAAGTAGATAACCTGG 59.196 45.833 0.82 0.00 0.00 4.45
2247 2519 2.019948 TGATGAGCTGTCATGCTGAC 57.980 50.000 0.00 8.75 43.92 3.51
2268 2540 2.848887 CGACGTGACAAACATGCAAAAA 59.151 40.909 0.00 0.00 38.94 1.94
2322 2594 7.462109 TTTTAAAAATAGTGTGTTGCAGCTG 57.538 32.000 10.11 10.11 0.00 4.24
2323 2595 4.654091 AAAAATAGTGTGTTGCAGCTGT 57.346 36.364 16.64 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.244463 GCAGCCCGGCCCGTTATA 62.244 66.667 5.55 0.00 0.00 0.98
45 46 4.827087 ATCTCGTGCTGCGGCCTG 62.827 66.667 16.57 7.47 41.72 4.85
46 47 4.521062 GATCTCGTGCTGCGGCCT 62.521 66.667 16.57 0.00 41.72 5.19
48 49 4.854784 TCGATCTCGTGCTGCGGC 62.855 66.667 11.65 11.65 41.72 6.53
49 50 2.951745 GTCGATCTCGTGCTGCGG 60.952 66.667 0.00 0.00 41.72 5.69
50 51 2.101185 AGTCGATCTCGTGCTGCG 59.899 61.111 0.00 0.00 40.80 5.18
51 52 1.136872 GTCAGTCGATCTCGTGCTGC 61.137 60.000 16.11 0.00 40.31 5.25
52 53 0.449786 AGTCAGTCGATCTCGTGCTG 59.550 55.000 15.33 15.33 41.08 4.41
53 54 0.730265 GAGTCAGTCGATCTCGTGCT 59.270 55.000 0.00 0.00 40.80 4.40
54 55 0.448197 TGAGTCAGTCGATCTCGTGC 59.552 55.000 0.00 0.00 40.80 5.34
55 56 2.902065 TTGAGTCAGTCGATCTCGTG 57.098 50.000 0.00 0.00 40.80 4.35
56 57 3.004419 TGTTTTGAGTCAGTCGATCTCGT 59.996 43.478 0.00 0.00 40.80 4.18
57 58 3.362237 GTGTTTTGAGTCAGTCGATCTCG 59.638 47.826 0.00 0.00 41.45 4.04
58 59 4.384247 CAGTGTTTTGAGTCAGTCGATCTC 59.616 45.833 0.00 0.00 0.00 2.75
59 60 4.302455 CAGTGTTTTGAGTCAGTCGATCT 58.698 43.478 0.00 0.00 0.00 2.75
60 61 3.430218 CCAGTGTTTTGAGTCAGTCGATC 59.570 47.826 0.00 0.00 0.00 3.69
61 62 3.393800 CCAGTGTTTTGAGTCAGTCGAT 58.606 45.455 0.00 0.00 0.00 3.59
62 63 2.821546 CCAGTGTTTTGAGTCAGTCGA 58.178 47.619 0.00 0.00 0.00 4.20
63 64 1.261619 GCCAGTGTTTTGAGTCAGTCG 59.738 52.381 0.00 0.00 0.00 4.18
64 65 1.604278 GGCCAGTGTTTTGAGTCAGTC 59.396 52.381 0.00 0.00 0.00 3.51
65 66 1.064758 TGGCCAGTGTTTTGAGTCAGT 60.065 47.619 0.00 0.00 0.00 3.41
66 67 1.605710 CTGGCCAGTGTTTTGAGTCAG 59.394 52.381 25.53 0.00 0.00 3.51
67 68 1.064758 ACTGGCCAGTGTTTTGAGTCA 60.065 47.619 37.39 0.00 40.75 3.41
68 69 1.604278 GACTGGCCAGTGTTTTGAGTC 59.396 52.381 42.40 20.79 42.66 3.36
69 70 1.680338 GACTGGCCAGTGTTTTGAGT 58.320 50.000 42.40 16.21 42.66 3.41
70 71 0.588252 CGACTGGCCAGTGTTTTGAG 59.412 55.000 42.40 19.04 42.66 3.02
71 72 0.179234 TCGACTGGCCAGTGTTTTGA 59.821 50.000 42.40 25.88 42.66 2.69
72 73 0.307760 GTCGACTGGCCAGTGTTTTG 59.692 55.000 42.40 24.17 42.66 2.44
73 74 1.157870 CGTCGACTGGCCAGTGTTTT 61.158 55.000 42.40 18.72 42.66 2.43
74 75 1.594293 CGTCGACTGGCCAGTGTTT 60.594 57.895 42.40 19.16 42.66 2.83
75 76 2.029073 CGTCGACTGGCCAGTGTT 59.971 61.111 42.40 19.59 42.66 3.32
76 77 4.664677 GCGTCGACTGGCCAGTGT 62.665 66.667 42.40 21.31 42.66 3.55
77 78 2.874010 CTAGCGTCGACTGGCCAGTG 62.874 65.000 42.40 30.60 42.66 3.66
78 79 2.675423 TAGCGTCGACTGGCCAGT 60.675 61.111 38.42 38.42 45.84 4.00
79 80 2.103143 CTAGCGTCGACTGGCCAG 59.897 66.667 31.60 31.60 0.00 4.85
80 81 4.129737 GCTAGCGTCGACTGGCCA 62.130 66.667 14.70 4.71 38.14 5.36
81 82 3.827898 AGCTAGCGTCGACTGGCC 61.828 66.667 14.70 0.00 44.59 5.36
82 83 2.580867 CAGCTAGCGTCGACTGGC 60.581 66.667 14.70 10.70 43.90 4.85
83 84 2.103143 CCAGCTAGCGTCGACTGG 59.897 66.667 14.70 9.42 43.45 4.00
84 85 2.580867 GCCAGCTAGCGTCGACTG 60.581 66.667 14.70 8.46 0.00 3.51
85 86 3.827898 GGCCAGCTAGCGTCGACT 61.828 66.667 14.70 0.00 0.00 4.18
86 87 4.874977 GGGCCAGCTAGCGTCGAC 62.875 72.222 9.55 5.18 0.00 4.20
88 89 3.740128 AATGGGCCAGCTAGCGTCG 62.740 63.158 13.78 1.76 0.00 5.12
89 90 2.182842 CAATGGGCCAGCTAGCGTC 61.183 63.158 13.78 0.00 0.00 5.19
90 91 2.124570 CAATGGGCCAGCTAGCGT 60.125 61.111 13.78 0.00 0.00 5.07
91 92 1.451927 TTCAATGGGCCAGCTAGCG 60.452 57.895 13.78 4.28 0.00 4.26
92 93 1.387295 GGTTCAATGGGCCAGCTAGC 61.387 60.000 13.78 6.62 0.00 3.42
93 94 1.097547 CGGTTCAATGGGCCAGCTAG 61.098 60.000 13.78 1.31 0.00 3.42
94 95 1.077787 CGGTTCAATGGGCCAGCTA 60.078 57.895 13.78 0.00 0.00 3.32
95 96 2.361610 CGGTTCAATGGGCCAGCT 60.362 61.111 13.78 0.00 0.00 4.24
96 97 4.133796 GCGGTTCAATGGGCCAGC 62.134 66.667 13.78 3.79 0.00 4.85
97 98 2.676121 TGCGGTTCAATGGGCCAG 60.676 61.111 13.78 0.00 0.00 4.85
98 99 2.676121 CTGCGGTTCAATGGGCCA 60.676 61.111 9.61 9.61 0.00 5.36
99 100 2.361104 TCTGCGGTTCAATGGGCC 60.361 61.111 0.00 0.00 0.00 5.80
100 101 2.700773 GGTCTGCGGTTCAATGGGC 61.701 63.158 0.00 0.00 0.00 5.36
101 102 2.398554 CGGTCTGCGGTTCAATGGG 61.399 63.158 0.00 0.00 0.00 4.00
102 103 3.039202 GCGGTCTGCGGTTCAATGG 62.039 63.158 0.00 0.00 0.00 3.16
103 104 2.480555 GCGGTCTGCGGTTCAATG 59.519 61.111 0.00 0.00 0.00 2.82
127 128 7.648142 TGAGATGCGTTCTGTTTATTCTTTTT 58.352 30.769 0.00 0.00 33.74 1.94
128 129 7.202016 TGAGATGCGTTCTGTTTATTCTTTT 57.798 32.000 0.00 0.00 33.74 2.27
129 130 6.801539 TGAGATGCGTTCTGTTTATTCTTT 57.198 33.333 0.00 0.00 33.74 2.52
130 131 6.801539 TTGAGATGCGTTCTGTTTATTCTT 57.198 33.333 0.00 0.00 33.74 2.52
131 132 6.621596 GCTTTGAGATGCGTTCTGTTTATTCT 60.622 38.462 0.00 0.00 33.74 2.40
132 133 5.509622 GCTTTGAGATGCGTTCTGTTTATTC 59.490 40.000 0.00 0.00 33.74 1.75
133 134 5.048782 TGCTTTGAGATGCGTTCTGTTTATT 60.049 36.000 0.00 0.00 33.74 1.40
134 135 4.455533 TGCTTTGAGATGCGTTCTGTTTAT 59.544 37.500 0.00 0.00 33.74 1.40
135 136 3.812609 TGCTTTGAGATGCGTTCTGTTTA 59.187 39.130 0.00 0.00 33.74 2.01
136 137 2.618241 TGCTTTGAGATGCGTTCTGTTT 59.382 40.909 0.00 0.00 33.74 2.83
137 138 2.221169 TGCTTTGAGATGCGTTCTGTT 58.779 42.857 0.00 0.00 33.74 3.16
138 139 1.882912 TGCTTTGAGATGCGTTCTGT 58.117 45.000 0.00 0.00 33.74 3.41
139 140 2.031769 TGTTGCTTTGAGATGCGTTCTG 60.032 45.455 0.00 0.00 33.74 3.02
140 141 2.221169 TGTTGCTTTGAGATGCGTTCT 58.779 42.857 0.00 0.00 37.41 3.01
141 142 2.686558 TGTTGCTTTGAGATGCGTTC 57.313 45.000 0.00 0.00 0.00 3.95
142 143 2.095059 GGATGTTGCTTTGAGATGCGTT 60.095 45.455 0.00 0.00 0.00 4.84
143 144 1.470098 GGATGTTGCTTTGAGATGCGT 59.530 47.619 0.00 0.00 0.00 5.24
144 145 1.469703 TGGATGTTGCTTTGAGATGCG 59.530 47.619 0.00 0.00 0.00 4.73
145 146 3.248266 GTTGGATGTTGCTTTGAGATGC 58.752 45.455 0.00 0.00 0.00 3.91
146 147 3.495193 CGTTGGATGTTGCTTTGAGATG 58.505 45.455 0.00 0.00 0.00 2.90
147 148 2.489329 CCGTTGGATGTTGCTTTGAGAT 59.511 45.455 0.00 0.00 0.00 2.75
148 149 1.879380 CCGTTGGATGTTGCTTTGAGA 59.121 47.619 0.00 0.00 0.00 3.27
149 150 1.879380 TCCGTTGGATGTTGCTTTGAG 59.121 47.619 0.00 0.00 0.00 3.02
150 151 1.606668 GTCCGTTGGATGTTGCTTTGA 59.393 47.619 0.00 0.00 32.73 2.69
151 152 1.335872 GGTCCGTTGGATGTTGCTTTG 60.336 52.381 0.00 0.00 32.73 2.77
152 153 0.958822 GGTCCGTTGGATGTTGCTTT 59.041 50.000 0.00 0.00 32.73 3.51
153 154 0.179004 TGGTCCGTTGGATGTTGCTT 60.179 50.000 0.00 0.00 32.73 3.91
154 155 0.606401 CTGGTCCGTTGGATGTTGCT 60.606 55.000 0.00 0.00 32.73 3.91
155 156 0.605319 TCTGGTCCGTTGGATGTTGC 60.605 55.000 0.00 0.00 32.73 4.17
156 157 1.890876 TTCTGGTCCGTTGGATGTTG 58.109 50.000 0.00 0.00 32.73 3.33
157 158 2.649531 TTTCTGGTCCGTTGGATGTT 57.350 45.000 0.00 0.00 32.73 2.71
158 159 2.711542 GATTTCTGGTCCGTTGGATGT 58.288 47.619 0.00 0.00 32.73 3.06
159 160 1.665679 CGATTTCTGGTCCGTTGGATG 59.334 52.381 0.00 0.00 32.73 3.51
160 161 1.553248 TCGATTTCTGGTCCGTTGGAT 59.447 47.619 0.00 0.00 32.73 3.41
161 162 0.970640 TCGATTTCTGGTCCGTTGGA 59.029 50.000 0.00 0.00 0.00 3.53
162 163 1.076332 GTCGATTTCTGGTCCGTTGG 58.924 55.000 0.00 0.00 0.00 3.77
163 164 1.726791 CAGTCGATTTCTGGTCCGTTG 59.273 52.381 0.00 0.00 0.00 4.10
164 165 1.616865 TCAGTCGATTTCTGGTCCGTT 59.383 47.619 2.09 0.00 34.15 4.44
165 166 1.067776 GTCAGTCGATTTCTGGTCCGT 60.068 52.381 2.09 0.00 34.15 4.69
166 167 1.630148 GTCAGTCGATTTCTGGTCCG 58.370 55.000 2.09 0.00 34.15 4.79
167 168 1.630148 CGTCAGTCGATTTCTGGTCC 58.370 55.000 2.09 0.00 42.86 4.46
168 169 0.992802 GCGTCAGTCGATTTCTGGTC 59.007 55.000 2.09 0.00 42.86 4.02
169 170 0.317160 TGCGTCAGTCGATTTCTGGT 59.683 50.000 2.09 0.00 42.86 4.00
170 171 1.428448 TTGCGTCAGTCGATTTCTGG 58.572 50.000 2.09 0.00 42.86 3.86
171 172 3.120546 ACATTTGCGTCAGTCGATTTCTG 60.121 43.478 0.00 0.00 42.86 3.02
172 173 3.067106 ACATTTGCGTCAGTCGATTTCT 58.933 40.909 0.00 0.00 42.86 2.52
173 174 3.455619 ACATTTGCGTCAGTCGATTTC 57.544 42.857 0.00 0.00 42.86 2.17
174 175 3.896648 AACATTTGCGTCAGTCGATTT 57.103 38.095 0.00 0.00 42.86 2.17
175 176 5.351233 TTTAACATTTGCGTCAGTCGATT 57.649 34.783 0.00 0.00 42.86 3.34
176 177 5.049680 AGTTTTAACATTTGCGTCAGTCGAT 60.050 36.000 0.00 0.00 42.86 3.59
177 178 4.271533 AGTTTTAACATTTGCGTCAGTCGA 59.728 37.500 0.00 0.00 42.86 4.20
178 179 4.523813 AGTTTTAACATTTGCGTCAGTCG 58.476 39.130 0.00 0.00 43.12 4.18
179 180 5.507077 TGAGTTTTAACATTTGCGTCAGTC 58.493 37.500 0.00 0.00 0.00 3.51
180 181 5.493133 TGAGTTTTAACATTTGCGTCAGT 57.507 34.783 0.00 0.00 0.00 3.41
181 182 4.379793 GCTGAGTTTTAACATTTGCGTCAG 59.620 41.667 0.00 0.00 33.54 3.51
182 183 4.036262 AGCTGAGTTTTAACATTTGCGTCA 59.964 37.500 0.00 0.00 0.00 4.35
183 184 4.379793 CAGCTGAGTTTTAACATTTGCGTC 59.620 41.667 8.42 0.00 0.00 5.19
184 185 4.036262 TCAGCTGAGTTTTAACATTTGCGT 59.964 37.500 13.74 0.00 0.00 5.24
185 186 4.379793 GTCAGCTGAGTTTTAACATTTGCG 59.620 41.667 18.89 0.00 0.00 4.85
186 187 5.400485 CAGTCAGCTGAGTTTTAACATTTGC 59.600 40.000 21.67 2.19 45.28 3.68
187 188 6.728200 TCAGTCAGCTGAGTTTTAACATTTG 58.272 36.000 21.67 6.59 45.94 2.32
188 189 6.942532 TCAGTCAGCTGAGTTTTAACATTT 57.057 33.333 21.67 0.00 45.94 2.32
201 202 1.473258 AGCTACCTCTCAGTCAGCTG 58.527 55.000 7.63 7.63 40.92 4.24
202 203 3.593442 ATAGCTACCTCTCAGTCAGCT 57.407 47.619 0.00 0.00 44.43 4.24
203 204 4.616953 GAAATAGCTACCTCTCAGTCAGC 58.383 47.826 0.00 0.00 0.00 4.26
204 205 4.576873 TCGAAATAGCTACCTCTCAGTCAG 59.423 45.833 0.00 0.00 0.00 3.51
205 206 4.524053 TCGAAATAGCTACCTCTCAGTCA 58.476 43.478 0.00 0.00 0.00 3.41
206 207 5.066764 ACTTCGAAATAGCTACCTCTCAGTC 59.933 44.000 0.00 0.00 0.00 3.51
207 208 4.951094 ACTTCGAAATAGCTACCTCTCAGT 59.049 41.667 0.00 0.00 0.00 3.41
208 209 5.508200 ACTTCGAAATAGCTACCTCTCAG 57.492 43.478 0.00 0.00 0.00 3.35
209 210 5.651530 CAACTTCGAAATAGCTACCTCTCA 58.348 41.667 0.00 0.00 0.00 3.27
210 211 4.504826 GCAACTTCGAAATAGCTACCTCTC 59.495 45.833 0.00 0.00 0.00 3.20
211 212 4.160626 AGCAACTTCGAAATAGCTACCTCT 59.839 41.667 14.04 0.00 0.00 3.69
212 213 4.434520 AGCAACTTCGAAATAGCTACCTC 58.565 43.478 14.04 0.00 0.00 3.85
213 214 4.081642 TGAGCAACTTCGAAATAGCTACCT 60.082 41.667 15.20 0.00 31.61 3.08
214 215 4.033014 GTGAGCAACTTCGAAATAGCTACC 59.967 45.833 15.20 7.25 31.61 3.18
215 216 4.625742 TGTGAGCAACTTCGAAATAGCTAC 59.374 41.667 15.20 13.60 31.61 3.58
216 217 4.816392 TGTGAGCAACTTCGAAATAGCTA 58.184 39.130 15.20 0.00 31.61 3.32
217 218 3.664107 TGTGAGCAACTTCGAAATAGCT 58.336 40.909 15.16 15.16 34.61 3.32
218 219 4.606457 ATGTGAGCAACTTCGAAATAGC 57.394 40.909 0.00 3.24 0.00 2.97
219 220 6.470160 GTGTATGTGAGCAACTTCGAAATAG 58.530 40.000 0.00 0.00 0.00 1.73
220 221 5.061684 CGTGTATGTGAGCAACTTCGAAATA 59.938 40.000 0.00 0.00 0.00 1.40
221 222 4.143115 CGTGTATGTGAGCAACTTCGAAAT 60.143 41.667 0.00 0.00 0.00 2.17
222 223 3.183574 CGTGTATGTGAGCAACTTCGAAA 59.816 43.478 0.00 0.00 0.00 3.46
223 224 2.729360 CGTGTATGTGAGCAACTTCGAA 59.271 45.455 0.00 0.00 0.00 3.71
224 225 2.030628 TCGTGTATGTGAGCAACTTCGA 60.031 45.455 0.00 0.00 0.00 3.71
225 226 2.324860 TCGTGTATGTGAGCAACTTCG 58.675 47.619 0.00 0.00 0.00 3.79
226 227 3.980238 CTCGTGTATGTGAGCAACTTC 57.020 47.619 0.00 0.00 0.00 3.01
233 234 4.033990 AGTGTATGCTCGTGTATGTGAG 57.966 45.455 0.00 0.00 35.30 3.51
234 235 3.442273 TGAGTGTATGCTCGTGTATGTGA 59.558 43.478 0.00 0.00 38.28 3.58
235 236 3.547868 GTGAGTGTATGCTCGTGTATGTG 59.452 47.826 0.00 0.00 38.28 3.21
236 237 3.428999 GGTGAGTGTATGCTCGTGTATGT 60.429 47.826 0.00 0.00 38.28 2.29
237 238 3.116300 GGTGAGTGTATGCTCGTGTATG 58.884 50.000 0.00 0.00 38.28 2.39
238 239 2.758423 TGGTGAGTGTATGCTCGTGTAT 59.242 45.455 0.00 0.00 38.28 2.29
239 240 2.164338 TGGTGAGTGTATGCTCGTGTA 58.836 47.619 0.00 0.00 38.28 2.90
240 241 0.966179 TGGTGAGTGTATGCTCGTGT 59.034 50.000 0.00 0.00 38.28 4.49
241 242 2.299993 ATGGTGAGTGTATGCTCGTG 57.700 50.000 0.00 0.00 38.28 4.35
242 243 3.636764 TCATATGGTGAGTGTATGCTCGT 59.363 43.478 2.13 0.00 38.28 4.18
243 244 4.243007 TCATATGGTGAGTGTATGCTCG 57.757 45.455 2.13 0.00 38.28 5.03
244 245 4.445718 CGTTCATATGGTGAGTGTATGCTC 59.554 45.833 2.13 0.00 38.29 4.26
245 246 4.371786 CGTTCATATGGTGAGTGTATGCT 58.628 43.478 2.13 0.00 38.29 3.79
246 247 3.059597 GCGTTCATATGGTGAGTGTATGC 60.060 47.826 2.13 0.00 38.29 3.14
247 248 4.025730 GTGCGTTCATATGGTGAGTGTATG 60.026 45.833 2.13 0.00 38.29 2.39
248 249 4.119862 GTGCGTTCATATGGTGAGTGTAT 58.880 43.478 2.13 0.00 38.29 2.29
249 250 3.517602 GTGCGTTCATATGGTGAGTGTA 58.482 45.455 2.13 0.00 38.29 2.90
250 251 2.346803 GTGCGTTCATATGGTGAGTGT 58.653 47.619 2.13 0.00 38.29 3.55
251 252 1.324435 CGTGCGTTCATATGGTGAGTG 59.676 52.381 2.13 0.00 38.29 3.51
252 253 1.067142 ACGTGCGTTCATATGGTGAGT 60.067 47.619 2.13 0.00 38.29 3.41
253 254 1.324435 CACGTGCGTTCATATGGTGAG 59.676 52.381 0.82 0.00 38.29 3.51
254 255 1.337354 ACACGTGCGTTCATATGGTGA 60.337 47.619 17.22 0.00 34.25 4.02
255 256 1.075542 ACACGTGCGTTCATATGGTG 58.924 50.000 17.22 3.84 0.00 4.17
256 257 1.075542 CACACGTGCGTTCATATGGT 58.924 50.000 17.22 0.00 0.00 3.55
257 258 3.875813 CACACGTGCGTTCATATGG 57.124 52.632 17.22 0.00 0.00 2.74
273 274 1.062002 GTAGTGTGTGTGTGTGTGCAC 59.938 52.381 10.75 10.75 45.44 4.57
274 275 1.364721 GTAGTGTGTGTGTGTGTGCA 58.635 50.000 0.00 0.00 0.00 4.57
275 276 0.655733 GGTAGTGTGTGTGTGTGTGC 59.344 55.000 0.00 0.00 0.00 4.57
276 277 2.159099 AGAGGTAGTGTGTGTGTGTGTG 60.159 50.000 0.00 0.00 0.00 3.82
277 278 2.108168 AGAGGTAGTGTGTGTGTGTGT 58.892 47.619 0.00 0.00 0.00 3.72
278 279 2.890808 AGAGGTAGTGTGTGTGTGTG 57.109 50.000 0.00 0.00 0.00 3.82
279 280 4.149598 TCATAGAGGTAGTGTGTGTGTGT 58.850 43.478 0.00 0.00 0.00 3.72
280 281 4.738124 CTCATAGAGGTAGTGTGTGTGTG 58.262 47.826 0.00 0.00 0.00 3.82
281 282 3.193691 GCTCATAGAGGTAGTGTGTGTGT 59.806 47.826 0.00 0.00 0.00 3.72
282 283 3.193479 TGCTCATAGAGGTAGTGTGTGTG 59.807 47.826 0.00 0.00 0.00 3.82
283 284 3.193691 GTGCTCATAGAGGTAGTGTGTGT 59.806 47.826 0.00 0.00 0.00 3.72
284 285 3.429547 GGTGCTCATAGAGGTAGTGTGTG 60.430 52.174 0.00 0.00 0.00 3.82
285 286 2.761208 GGTGCTCATAGAGGTAGTGTGT 59.239 50.000 0.00 0.00 0.00 3.72
286 287 3.027412 AGGTGCTCATAGAGGTAGTGTG 58.973 50.000 0.00 0.00 0.00 3.82
287 288 3.390175 AGGTGCTCATAGAGGTAGTGT 57.610 47.619 0.00 0.00 0.00 3.55
288 289 3.243234 CGAAGGTGCTCATAGAGGTAGTG 60.243 52.174 0.00 0.00 0.00 2.74
289 290 2.952978 CGAAGGTGCTCATAGAGGTAGT 59.047 50.000 0.00 0.00 0.00 2.73
290 291 3.215151 TCGAAGGTGCTCATAGAGGTAG 58.785 50.000 0.00 0.00 0.00 3.18
291 292 3.215151 CTCGAAGGTGCTCATAGAGGTA 58.785 50.000 0.00 0.00 0.00 3.08
292 293 2.028130 CTCGAAGGTGCTCATAGAGGT 58.972 52.381 0.00 0.00 0.00 3.85
293 294 1.339610 CCTCGAAGGTGCTCATAGAGG 59.660 57.143 9.42 9.42 37.95 3.69
294 295 2.302260 TCCTCGAAGGTGCTCATAGAG 58.698 52.381 0.00 0.00 36.53 2.43
295 296 2.427453 GTTCCTCGAAGGTGCTCATAGA 59.573 50.000 0.00 0.00 36.53 1.98
296 297 2.428890 AGTTCCTCGAAGGTGCTCATAG 59.571 50.000 0.00 0.00 36.53 2.23
297 298 2.166459 CAGTTCCTCGAAGGTGCTCATA 59.834 50.000 0.00 0.00 36.53 2.15
298 299 1.066573 CAGTTCCTCGAAGGTGCTCAT 60.067 52.381 0.00 0.00 36.53 2.90
299 300 0.318441 CAGTTCCTCGAAGGTGCTCA 59.682 55.000 0.00 0.00 36.53 4.26
300 301 0.603569 TCAGTTCCTCGAAGGTGCTC 59.396 55.000 0.00 0.00 36.53 4.26
301 302 0.605589 CTCAGTTCCTCGAAGGTGCT 59.394 55.000 0.00 0.00 36.53 4.40
302 303 1.016653 GCTCAGTTCCTCGAAGGTGC 61.017 60.000 0.00 0.00 36.53 5.01
303 304 0.390472 GGCTCAGTTCCTCGAAGGTG 60.390 60.000 0.00 0.00 36.53 4.00
304 305 1.878656 CGGCTCAGTTCCTCGAAGGT 61.879 60.000 0.00 0.00 36.53 3.50
305 306 1.153745 CGGCTCAGTTCCTCGAAGG 60.154 63.158 0.00 0.00 36.46 3.46
306 307 1.153745 CCGGCTCAGTTCCTCGAAG 60.154 63.158 0.00 0.00 0.00 3.79
307 308 2.970639 CCGGCTCAGTTCCTCGAA 59.029 61.111 0.00 0.00 0.00 3.71
308 309 3.760035 GCCGGCTCAGTTCCTCGA 61.760 66.667 22.15 0.00 0.00 4.04
309 310 4.069232 TGCCGGCTCAGTTCCTCG 62.069 66.667 29.70 0.00 0.00 4.63
310 311 2.435059 GTGCCGGCTCAGTTCCTC 60.435 66.667 29.70 2.95 0.00 3.71
311 312 2.527951 GATGTGCCGGCTCAGTTCCT 62.528 60.000 32.06 17.98 0.00 3.36
312 313 2.045926 ATGTGCCGGCTCAGTTCC 60.046 61.111 32.06 10.84 0.00 3.62
313 314 0.745845 ATGATGTGCCGGCTCAGTTC 60.746 55.000 32.06 25.73 0.00 3.01
314 315 0.745845 GATGATGTGCCGGCTCAGTT 60.746 55.000 32.06 19.41 0.00 3.16
315 316 1.153289 GATGATGTGCCGGCTCAGT 60.153 57.895 32.06 21.65 0.00 3.41
316 317 0.463295 AAGATGATGTGCCGGCTCAG 60.463 55.000 32.06 0.00 0.00 3.35
317 318 0.745486 CAAGATGATGTGCCGGCTCA 60.745 55.000 31.27 31.27 0.00 4.26
318 319 0.462581 TCAAGATGATGTGCCGGCTC 60.463 55.000 29.70 25.38 0.00 4.70
319 320 0.463295 CTCAAGATGATGTGCCGGCT 60.463 55.000 29.70 7.33 0.00 5.52
320 321 0.462581 TCTCAAGATGATGTGCCGGC 60.463 55.000 22.73 22.73 0.00 6.13
321 322 2.251409 ATCTCAAGATGATGTGCCGG 57.749 50.000 0.00 0.00 32.68 6.13
322 323 3.200483 TCAATCTCAAGATGATGTGCCG 58.800 45.455 0.00 0.00 34.49 5.69
323 324 4.820173 TCATCAATCTCAAGATGATGTGCC 59.180 41.667 19.97 0.00 44.04 5.01
324 325 6.373186 TTCATCAATCTCAAGATGATGTGC 57.627 37.500 19.97 0.00 47.00 4.57
327 328 7.254829 GGTGACTTCATCAATCTCAAGATGATG 60.255 40.741 17.35 17.35 47.00 3.07
328 329 6.766944 GGTGACTTCATCAATCTCAAGATGAT 59.233 38.462 6.01 0.00 47.00 2.45
329 330 6.111382 GGTGACTTCATCAATCTCAAGATGA 58.889 40.000 0.00 0.00 46.38 2.92
330 331 5.006455 CGGTGACTTCATCAATCTCAAGATG 59.994 44.000 0.00 0.00 39.72 2.90
331 332 5.114780 CGGTGACTTCATCAATCTCAAGAT 58.885 41.667 0.00 0.00 39.72 2.40
332 333 4.498241 CGGTGACTTCATCAATCTCAAGA 58.502 43.478 0.00 0.00 39.72 3.02
333 334 3.063180 GCGGTGACTTCATCAATCTCAAG 59.937 47.826 0.00 0.00 39.72 3.02
334 335 3.002791 GCGGTGACTTCATCAATCTCAA 58.997 45.455 0.00 0.00 39.72 3.02
335 336 2.028203 TGCGGTGACTTCATCAATCTCA 60.028 45.455 0.00 0.00 39.72 3.27
336 337 2.606725 CTGCGGTGACTTCATCAATCTC 59.393 50.000 0.00 0.00 39.72 2.75
337 338 2.234661 TCTGCGGTGACTTCATCAATCT 59.765 45.455 0.00 0.00 39.72 2.40
338 339 2.349886 GTCTGCGGTGACTTCATCAATC 59.650 50.000 0.00 0.00 39.72 2.67
339 340 2.289631 TGTCTGCGGTGACTTCATCAAT 60.290 45.455 0.00 0.00 39.72 2.57
340 341 1.069978 TGTCTGCGGTGACTTCATCAA 59.930 47.619 0.00 0.00 39.72 2.57
341 342 0.678950 TGTCTGCGGTGACTTCATCA 59.321 50.000 0.00 0.00 37.79 3.07
342 343 1.071605 GTGTCTGCGGTGACTTCATC 58.928 55.000 0.00 0.00 37.79 2.92
343 344 0.320771 GGTGTCTGCGGTGACTTCAT 60.321 55.000 0.00 0.00 37.79 2.57
344 345 1.069090 GGTGTCTGCGGTGACTTCA 59.931 57.895 0.00 0.00 37.79 3.02
345 346 0.249911 AAGGTGTCTGCGGTGACTTC 60.250 55.000 0.00 0.00 37.79 3.01
346 347 0.249911 GAAGGTGTCTGCGGTGACTT 60.250 55.000 0.00 0.00 37.79 3.01
347 348 1.367840 GAAGGTGTCTGCGGTGACT 59.632 57.895 0.00 0.00 37.79 3.41
348 349 2.022129 CGAAGGTGTCTGCGGTGAC 61.022 63.158 0.00 0.00 38.37 3.67
349 350 1.174078 TACGAAGGTGTCTGCGGTGA 61.174 55.000 0.00 0.00 46.11 4.02
350 351 0.732880 CTACGAAGGTGTCTGCGGTG 60.733 60.000 0.00 0.00 46.11 4.94
351 352 1.177256 ACTACGAAGGTGTCTGCGGT 61.177 55.000 0.00 0.00 46.11 5.68
352 353 0.456312 GACTACGAAGGTGTCTGCGG 60.456 60.000 0.00 0.00 46.11 5.69
354 355 0.520404 TCGACTACGAAGGTGTCTGC 59.480 55.000 0.00 0.00 45.74 4.26
362 363 7.648855 GGAGATGTTCCTGTCGACTACGAAG 62.649 52.000 17.92 4.94 45.33 3.79
363 364 5.923009 GGAGATGTTCCTGTCGACTACGAA 61.923 50.000 17.92 12.09 45.33 3.85
364 365 2.676839 GAGATGTTCCTGTCGACTACGA 59.323 50.000 17.92 6.41 46.56 3.43
365 366 2.223294 GGAGATGTTCCTGTCGACTACG 60.223 54.545 17.92 5.16 43.16 3.51
366 367 3.423996 GGAGATGTTCCTGTCGACTAC 57.576 52.381 17.92 9.95 43.16 2.73
377 378 3.522553 CGTTAAGTGGGAGGAGATGTTC 58.477 50.000 0.00 0.00 0.00 3.18
378 379 2.354805 GCGTTAAGTGGGAGGAGATGTT 60.355 50.000 0.00 0.00 0.00 2.71
379 380 1.207329 GCGTTAAGTGGGAGGAGATGT 59.793 52.381 0.00 0.00 0.00 3.06
380 381 1.482593 AGCGTTAAGTGGGAGGAGATG 59.517 52.381 0.00 0.00 0.00 2.90
381 382 1.757699 GAGCGTTAAGTGGGAGGAGAT 59.242 52.381 0.00 0.00 0.00 2.75
382 383 1.183549 GAGCGTTAAGTGGGAGGAGA 58.816 55.000 0.00 0.00 0.00 3.71
383 384 0.895530 TGAGCGTTAAGTGGGAGGAG 59.104 55.000 0.00 0.00 0.00 3.69
384 385 1.480954 GATGAGCGTTAAGTGGGAGGA 59.519 52.381 0.00 0.00 0.00 3.71
385 386 1.802880 CGATGAGCGTTAAGTGGGAGG 60.803 57.143 0.00 0.00 34.64 4.30
386 387 1.560923 CGATGAGCGTTAAGTGGGAG 58.439 55.000 0.00 0.00 34.64 4.30
387 388 0.459585 GCGATGAGCGTTAAGTGGGA 60.460 55.000 0.00 0.00 43.41 4.37
388 389 2.006772 GCGATGAGCGTTAAGTGGG 58.993 57.895 0.00 0.00 43.41 4.61
399 400 0.740868 TTCAGCTTTCCGGCGATGAG 60.741 55.000 9.30 3.53 37.29 2.90
400 401 0.321210 TTTCAGCTTTCCGGCGATGA 60.321 50.000 9.30 0.00 37.29 2.92
401 402 0.521291 TTTTCAGCTTTCCGGCGATG 59.479 50.000 9.30 0.00 37.29 3.84
402 403 0.521735 GTTTTCAGCTTTCCGGCGAT 59.478 50.000 9.30 0.00 37.29 4.58
403 404 0.534203 AGTTTTCAGCTTTCCGGCGA 60.534 50.000 9.30 0.00 37.29 5.54
404 405 0.110192 GAGTTTTCAGCTTTCCGGCG 60.110 55.000 0.00 0.00 37.29 6.46
405 406 1.068954 CAGAGTTTTCAGCTTTCCGGC 60.069 52.381 0.00 0.00 0.00 6.13
406 407 2.494059 TCAGAGTTTTCAGCTTTCCGG 58.506 47.619 0.00 0.00 0.00 5.14
407 408 3.748048 TCATCAGAGTTTTCAGCTTTCCG 59.252 43.478 0.00 0.00 0.00 4.30
408 409 4.379290 GCTCATCAGAGTTTTCAGCTTTCC 60.379 45.833 0.00 0.00 44.00 3.13
409 410 4.455190 AGCTCATCAGAGTTTTCAGCTTTC 59.545 41.667 0.00 0.00 44.00 2.62
410 411 4.215827 CAGCTCATCAGAGTTTTCAGCTTT 59.784 41.667 0.00 0.00 44.00 3.51
411 412 3.752222 CAGCTCATCAGAGTTTTCAGCTT 59.248 43.478 0.00 0.00 44.00 3.74
412 413 3.336468 CAGCTCATCAGAGTTTTCAGCT 58.664 45.455 0.00 0.00 44.00 4.24
413 414 2.419324 CCAGCTCATCAGAGTTTTCAGC 59.581 50.000 0.00 0.00 44.00 4.26
414 415 3.008330 CCCAGCTCATCAGAGTTTTCAG 58.992 50.000 0.00 0.00 44.00 3.02
415 416 2.290514 CCCCAGCTCATCAGAGTTTTCA 60.291 50.000 0.00 0.00 44.00 2.69
416 417 2.026822 TCCCCAGCTCATCAGAGTTTTC 60.027 50.000 0.00 0.00 44.00 2.29
417 418 1.988107 TCCCCAGCTCATCAGAGTTTT 59.012 47.619 0.00 0.00 44.00 2.43
418 419 1.661463 TCCCCAGCTCATCAGAGTTT 58.339 50.000 0.00 0.00 44.00 2.66
419 420 1.890552 ATCCCCAGCTCATCAGAGTT 58.109 50.000 0.00 0.00 44.00 3.01
420 421 2.324541 GTATCCCCAGCTCATCAGAGT 58.675 52.381 0.00 0.00 44.00 3.24
421 422 1.622811 GGTATCCCCAGCTCATCAGAG 59.377 57.143 0.00 0.00 44.96 3.35
422 423 1.062198 TGGTATCCCCAGCTCATCAGA 60.062 52.381 0.00 0.00 38.72 3.27
423 424 1.071385 GTGGTATCCCCAGCTCATCAG 59.929 57.143 0.00 0.00 46.45 2.90
424 425 1.131638 GTGGTATCCCCAGCTCATCA 58.868 55.000 0.00 0.00 46.45 3.07
425 426 1.071385 CAGTGGTATCCCCAGCTCATC 59.929 57.143 0.00 0.00 46.45 2.92
426 427 1.135094 CAGTGGTATCCCCAGCTCAT 58.865 55.000 0.00 0.00 46.45 2.90
427 428 0.252696 ACAGTGGTATCCCCAGCTCA 60.253 55.000 0.00 0.00 46.45 4.26
428 429 0.179000 CACAGTGGTATCCCCAGCTC 59.821 60.000 0.00 0.00 46.45 4.09
429 430 1.915078 GCACAGTGGTATCCCCAGCT 61.915 60.000 1.84 0.00 46.45 4.24
430 431 1.452108 GCACAGTGGTATCCCCAGC 60.452 63.158 1.84 0.00 46.45 4.85
431 432 0.179000 GAGCACAGTGGTATCCCCAG 59.821 60.000 4.92 0.00 46.45 4.45
432 433 1.271840 GGAGCACAGTGGTATCCCCA 61.272 60.000 4.92 0.00 42.51 4.96
433 434 0.983378 AGGAGCACAGTGGTATCCCC 60.983 60.000 4.92 2.53 34.23 4.81
434 435 1.789523 TAGGAGCACAGTGGTATCCC 58.210 55.000 4.92 2.92 34.23 3.85
435 436 2.158943 GGTTAGGAGCACAGTGGTATCC 60.159 54.545 4.92 3.69 34.02 2.59
436 437 2.500098 TGGTTAGGAGCACAGTGGTATC 59.500 50.000 4.92 1.35 0.00 2.24
437 438 2.546899 TGGTTAGGAGCACAGTGGTAT 58.453 47.619 4.92 0.02 0.00 2.73
438 439 2.018355 TGGTTAGGAGCACAGTGGTA 57.982 50.000 4.92 0.00 0.00 3.25
439 440 1.362224 ATGGTTAGGAGCACAGTGGT 58.638 50.000 4.51 4.51 35.86 4.16
440 441 2.236146 TGTATGGTTAGGAGCACAGTGG 59.764 50.000 1.84 0.00 35.86 4.00
441 442 3.262420 GTGTATGGTTAGGAGCACAGTG 58.738 50.000 0.00 0.00 35.86 3.66
442 443 2.236395 GGTGTATGGTTAGGAGCACAGT 59.764 50.000 0.00 0.00 35.86 3.55
443 444 2.236146 TGGTGTATGGTTAGGAGCACAG 59.764 50.000 0.00 0.00 35.86 3.66
444 445 2.027561 GTGGTGTATGGTTAGGAGCACA 60.028 50.000 0.00 0.00 35.86 4.57
445 446 2.027561 TGTGGTGTATGGTTAGGAGCAC 60.028 50.000 0.00 0.00 35.86 4.40
446 447 2.261729 TGTGGTGTATGGTTAGGAGCA 58.738 47.619 0.00 0.00 37.73 4.26
447 448 3.206150 CATGTGGTGTATGGTTAGGAGC 58.794 50.000 0.00 0.00 0.00 4.70
448 449 4.487714 ACATGTGGTGTATGGTTAGGAG 57.512 45.455 0.00 0.00 39.91 3.69
449 450 4.287326 TCAACATGTGGTGTATGGTTAGGA 59.713 41.667 0.00 0.00 41.14 2.94
450 451 4.584874 TCAACATGTGGTGTATGGTTAGG 58.415 43.478 0.00 0.00 41.14 2.69
451 452 5.449041 GCATCAACATGTGGTGTATGGTTAG 60.449 44.000 0.00 0.00 40.83 2.34
452 453 4.397730 GCATCAACATGTGGTGTATGGTTA 59.602 41.667 0.00 0.00 40.83 2.85
453 454 3.193267 GCATCAACATGTGGTGTATGGTT 59.807 43.478 0.00 0.00 40.83 3.67
454 455 2.754552 GCATCAACATGTGGTGTATGGT 59.245 45.455 0.00 0.00 40.83 3.55
455 456 2.223317 CGCATCAACATGTGGTGTATGG 60.223 50.000 0.00 0.00 40.83 2.74
456 457 2.792196 GCGCATCAACATGTGGTGTATG 60.792 50.000 0.30 0.00 40.83 2.39
457 458 1.401552 GCGCATCAACATGTGGTGTAT 59.598 47.619 0.30 0.00 40.83 2.29
458 459 0.801872 GCGCATCAACATGTGGTGTA 59.198 50.000 0.30 0.00 40.83 2.90
459 460 1.171549 TGCGCATCAACATGTGGTGT 61.172 50.000 5.66 0.00 40.83 4.16
460 461 0.455464 CTGCGCATCAACATGTGGTG 60.455 55.000 12.24 1.45 41.76 4.17
461 462 0.890542 ACTGCGCATCAACATGTGGT 60.891 50.000 12.24 0.00 40.41 4.16
462 463 0.241749 AACTGCGCATCAACATGTGG 59.758 50.000 12.24 0.00 40.41 4.17
463 464 1.069091 TCAACTGCGCATCAACATGTG 60.069 47.619 12.24 0.00 42.60 3.21
464 465 1.237533 TCAACTGCGCATCAACATGT 58.762 45.000 12.24 0.00 31.86 3.21
465 466 2.334971 TTCAACTGCGCATCAACATG 57.665 45.000 12.24 0.00 0.00 3.21
466 467 3.581024 ATTTCAACTGCGCATCAACAT 57.419 38.095 12.24 0.00 0.00 2.71
467 468 3.367992 AATTTCAACTGCGCATCAACA 57.632 38.095 12.24 0.00 0.00 3.33
468 469 4.713854 AAAATTTCAACTGCGCATCAAC 57.286 36.364 12.24 0.00 0.00 3.18
469 470 5.982516 AGTTAAAATTTCAACTGCGCATCAA 59.017 32.000 12.24 0.00 33.78 2.57
470 471 5.527951 AGTTAAAATTTCAACTGCGCATCA 58.472 33.333 12.24 0.00 33.78 3.07
471 472 7.561237 TTAGTTAAAATTTCAACTGCGCATC 57.439 32.000 15.75 0.00 35.79 3.91
472 473 8.532977 AATTAGTTAAAATTTCAACTGCGCAT 57.467 26.923 15.75 0.00 35.79 4.73
473 474 7.149047 CGAATTAGTTAAAATTTCAACTGCGCA 60.149 33.333 15.75 10.98 35.79 6.09
474 475 7.060174 TCGAATTAGTTAAAATTTCAACTGCGC 59.940 33.333 15.75 0.00 35.79 6.09
475 476 8.429739 TCGAATTAGTTAAAATTTCAACTGCG 57.570 30.769 15.75 13.10 35.79 5.18
504 505 4.448210 TGTTCGTACCTGCTTCTCTTTTT 58.552 39.130 0.00 0.00 0.00 1.94
505 506 4.058817 CTGTTCGTACCTGCTTCTCTTTT 58.941 43.478 0.00 0.00 0.00 2.27
506 507 3.321111 TCTGTTCGTACCTGCTTCTCTTT 59.679 43.478 0.00 0.00 0.00 2.52
507 508 2.891580 TCTGTTCGTACCTGCTTCTCTT 59.108 45.455 0.00 0.00 0.00 2.85
508 509 2.515854 TCTGTTCGTACCTGCTTCTCT 58.484 47.619 0.00 0.00 0.00 3.10
509 510 3.440228 GATCTGTTCGTACCTGCTTCTC 58.560 50.000 0.00 0.00 0.00 2.87
510 511 2.166664 GGATCTGTTCGTACCTGCTTCT 59.833 50.000 0.00 0.00 0.00 2.85
511 512 2.094182 TGGATCTGTTCGTACCTGCTTC 60.094 50.000 0.00 0.00 0.00 3.86
512 513 1.899814 TGGATCTGTTCGTACCTGCTT 59.100 47.619 0.00 0.00 0.00 3.91
513 514 1.557099 TGGATCTGTTCGTACCTGCT 58.443 50.000 0.00 0.00 0.00 4.24
514 515 2.000447 GTTGGATCTGTTCGTACCTGC 59.000 52.381 0.00 0.00 0.00 4.85
515 516 3.594603 AGTTGGATCTGTTCGTACCTG 57.405 47.619 0.00 0.00 0.00 4.00
516 517 4.618920 AAAGTTGGATCTGTTCGTACCT 57.381 40.909 0.00 0.00 0.00 3.08
517 518 5.684550 AAAAAGTTGGATCTGTTCGTACC 57.315 39.130 0.00 0.00 0.00 3.34
537 538 7.376601 GTCGCGGACTTTTATTAGTTTGAAAAA 59.623 33.333 6.13 0.00 0.00 1.94
538 539 6.852345 GTCGCGGACTTTTATTAGTTTGAAAA 59.148 34.615 6.13 0.00 0.00 2.29
539 540 6.018098 TGTCGCGGACTTTTATTAGTTTGAAA 60.018 34.615 6.13 0.00 33.15 2.69
540 541 5.466058 TGTCGCGGACTTTTATTAGTTTGAA 59.534 36.000 6.13 0.00 33.15 2.69
541 542 4.989797 TGTCGCGGACTTTTATTAGTTTGA 59.010 37.500 6.13 0.00 33.15 2.69
542 543 5.272167 TGTCGCGGACTTTTATTAGTTTG 57.728 39.130 6.13 0.00 33.15 2.93
543 544 5.927954 TTGTCGCGGACTTTTATTAGTTT 57.072 34.783 6.13 0.00 33.15 2.66
544 545 7.599630 TTATTGTCGCGGACTTTTATTAGTT 57.400 32.000 6.13 0.00 33.15 2.24
545 546 7.118101 TGTTTATTGTCGCGGACTTTTATTAGT 59.882 33.333 6.13 0.00 33.15 2.24
546 547 7.457868 TGTTTATTGTCGCGGACTTTTATTAG 58.542 34.615 6.13 0.00 33.15 1.73
547 548 7.331440 TCTGTTTATTGTCGCGGACTTTTATTA 59.669 33.333 6.13 0.00 33.15 0.98
548 549 6.148150 TCTGTTTATTGTCGCGGACTTTTATT 59.852 34.615 6.13 0.00 33.15 1.40
549 550 5.640357 TCTGTTTATTGTCGCGGACTTTTAT 59.360 36.000 6.13 0.06 33.15 1.40
550 551 4.989797 TCTGTTTATTGTCGCGGACTTTTA 59.010 37.500 6.13 0.00 33.15 1.52
551 552 3.810941 TCTGTTTATTGTCGCGGACTTTT 59.189 39.130 6.13 0.00 33.15 2.27
552 553 3.395639 TCTGTTTATTGTCGCGGACTTT 58.604 40.909 6.13 0.00 33.15 2.66
553 554 3.034721 TCTGTTTATTGTCGCGGACTT 57.965 42.857 6.13 0.00 33.15 3.01
554 555 2.736144 TCTGTTTATTGTCGCGGACT 57.264 45.000 6.13 0.00 33.15 3.85
555 556 2.030457 CCATCTGTTTATTGTCGCGGAC 59.970 50.000 6.13 3.78 0.00 4.79
556 557 2.093921 TCCATCTGTTTATTGTCGCGGA 60.094 45.455 6.13 0.00 0.00 5.54
557 558 2.276201 TCCATCTGTTTATTGTCGCGG 58.724 47.619 6.13 0.00 0.00 6.46
558 559 4.335082 TTTCCATCTGTTTATTGTCGCG 57.665 40.909 0.00 0.00 0.00 5.87
559 560 5.060940 GCTTTTTCCATCTGTTTATTGTCGC 59.939 40.000 0.00 0.00 0.00 5.19
560 561 5.572896 GGCTTTTTCCATCTGTTTATTGTCG 59.427 40.000 0.00 0.00 0.00 4.35
561 562 5.869344 GGGCTTTTTCCATCTGTTTATTGTC 59.131 40.000 0.00 0.00 0.00 3.18
562 563 5.306678 TGGGCTTTTTCCATCTGTTTATTGT 59.693 36.000 0.00 0.00 0.00 2.71
563 564 5.792741 TGGGCTTTTTCCATCTGTTTATTG 58.207 37.500 0.00 0.00 0.00 1.90
564 565 6.625532 ATGGGCTTTTTCCATCTGTTTATT 57.374 33.333 0.00 0.00 40.74 1.40
565 566 6.408869 CAATGGGCTTTTTCCATCTGTTTAT 58.591 36.000 0.00 0.00 43.61 1.40
566 567 5.792741 CAATGGGCTTTTTCCATCTGTTTA 58.207 37.500 0.00 0.00 43.61 2.01
567 568 4.644498 CAATGGGCTTTTTCCATCTGTTT 58.356 39.130 0.00 0.00 43.61 2.83
568 569 3.557686 GCAATGGGCTTTTTCCATCTGTT 60.558 43.478 0.00 0.00 43.61 3.16
569 570 2.027837 GCAATGGGCTTTTTCCATCTGT 60.028 45.455 0.00 0.00 43.61 3.41
570 571 2.027929 TGCAATGGGCTTTTTCCATCTG 60.028 45.455 0.00 0.00 43.61 2.90
571 572 2.259012 TGCAATGGGCTTTTTCCATCT 58.741 42.857 0.00 0.00 43.61 2.90
572 573 2.766345 TGCAATGGGCTTTTTCCATC 57.234 45.000 0.00 0.00 43.61 3.51
573 574 4.516323 GTTATGCAATGGGCTTTTTCCAT 58.484 39.130 0.00 0.00 46.11 3.41
574 575 3.307339 GGTTATGCAATGGGCTTTTTCCA 60.307 43.478 0.00 0.00 45.15 3.53
575 576 3.270027 GGTTATGCAATGGGCTTTTTCC 58.730 45.455 0.00 0.00 45.15 3.13
576 577 2.929398 CGGTTATGCAATGGGCTTTTTC 59.071 45.455 0.00 0.00 45.15 2.29
577 578 2.301583 ACGGTTATGCAATGGGCTTTTT 59.698 40.909 0.00 0.00 45.15 1.94
578 579 1.899142 ACGGTTATGCAATGGGCTTTT 59.101 42.857 0.00 0.00 45.15 2.27
579 580 1.555967 ACGGTTATGCAATGGGCTTT 58.444 45.000 0.00 0.00 45.15 3.51
580 581 2.425668 GTTACGGTTATGCAATGGGCTT 59.574 45.455 0.00 0.00 45.15 4.35
581 582 2.021457 GTTACGGTTATGCAATGGGCT 58.979 47.619 0.00 0.00 45.15 5.19
601 602 6.539826 GGCAAGGGAAAATATTGAATTTGAGG 59.460 38.462 0.00 0.00 0.00 3.86
607 608 6.408869 CAACTGGCAAGGGAAAATATTGAAT 58.591 36.000 0.00 0.00 0.00 2.57
649 653 1.451337 CGTGGTGGACAATGCAACCA 61.451 55.000 1.46 1.46 0.00 3.67
656 660 0.988832 ACCCATACGTGGTGGACAAT 59.011 50.000 19.79 3.64 44.48 2.71
668 672 0.322456 TGCAGAGTTGGCACCCATAC 60.322 55.000 0.00 0.00 36.11 2.39
669 673 0.035152 CTGCAGAGTTGGCACCCATA 60.035 55.000 8.42 0.00 36.11 2.74
670 674 1.303888 CTGCAGAGTTGGCACCCAT 60.304 57.895 8.42 0.00 36.11 4.00
671 675 2.113774 CTGCAGAGTTGGCACCCA 59.886 61.111 8.42 0.00 36.11 4.51
688 692 7.516312 CGGCCAATAAATCTAACTAACGAACTC 60.516 40.741 2.24 0.00 0.00 3.01
697 701 4.947388 TGCTTTCGGCCAATAAATCTAACT 59.053 37.500 2.24 0.00 40.92 2.24
699 703 4.202010 GCTGCTTTCGGCCAATAAATCTAA 60.202 41.667 2.24 0.00 40.92 2.10
703 707 1.824230 TGCTGCTTTCGGCCAATAAAT 59.176 42.857 2.24 0.00 43.94 1.40
724 728 3.056328 GAGAAAGCGGTGGTGCCC 61.056 66.667 0.00 0.00 34.65 5.36
775 779 3.788227 TGTGCTGGTGGTTAGAAGATT 57.212 42.857 0.00 0.00 0.00 2.40
777 781 2.875672 GCATGTGCTGGTGGTTAGAAGA 60.876 50.000 0.00 0.00 38.21 2.87
841 845 0.329596 GGCACACCCAAGGAGATCTT 59.670 55.000 0.00 0.00 35.79 2.40
906 911 3.190953 TGTTATGCATGTGATGTGGTGTG 59.809 43.478 10.16 0.00 0.00 3.82
907 912 3.419943 TGTTATGCATGTGATGTGGTGT 58.580 40.909 10.16 0.00 0.00 4.16
908 913 4.168014 GTTGTTATGCATGTGATGTGGTG 58.832 43.478 10.16 0.00 0.00 4.17
909 914 3.193267 GGTTGTTATGCATGTGATGTGGT 59.807 43.478 10.16 0.00 0.00 4.16
910 915 3.444742 AGGTTGTTATGCATGTGATGTGG 59.555 43.478 10.16 0.00 0.00 4.17
911 916 4.707030 AGGTTGTTATGCATGTGATGTG 57.293 40.909 10.16 0.00 0.00 3.21
912 917 5.500234 ACTAGGTTGTTATGCATGTGATGT 58.500 37.500 10.16 0.00 0.00 3.06
913 918 6.292328 CGTACTAGGTTGTTATGCATGTGATG 60.292 42.308 10.16 0.00 0.00 3.07
914 919 5.753438 CGTACTAGGTTGTTATGCATGTGAT 59.247 40.000 10.16 0.00 0.00 3.06
915 920 5.106442 CGTACTAGGTTGTTATGCATGTGA 58.894 41.667 10.16 0.00 0.00 3.58
1063 1095 1.302832 CGCTCACCAAGGAAAGGCT 60.303 57.895 0.00 0.00 0.00 4.58
1068 1100 0.250295 CTTCCACGCTCACCAAGGAA 60.250 55.000 0.00 0.00 36.92 3.36
1075 1107 1.578206 GGCCTTTCTTCCACGCTCAC 61.578 60.000 0.00 0.00 0.00 3.51
1082 1114 1.279271 GTAGAGCTGGCCTTTCTTCCA 59.721 52.381 3.32 0.00 0.00 3.53
1122 1160 2.738521 CCCACTGAGTTCGGCGTG 60.739 66.667 6.85 0.00 0.00 5.34
1134 1172 1.079127 CAATTCGACGCTCCCCACT 60.079 57.895 0.00 0.00 0.00 4.00
1182 1220 1.835693 CCAGGCCAGGATCTTCTCC 59.164 63.158 8.94 0.00 45.33 3.71
1183 1221 1.148048 GCCAGGCCAGGATCTTCTC 59.852 63.158 20.27 0.00 0.00 2.87
1275 1313 1.481056 CGGGACCCTGGTTCTTCACT 61.481 60.000 9.41 0.00 0.00 3.41
1277 1315 2.890766 GCGGGACCCTGGTTCTTCA 61.891 63.158 9.41 0.00 0.00 3.02
1374 1536 9.185680 ACAGTATCATACACATATAGGCGATTA 57.814 33.333 0.00 0.00 0.00 1.75
1468 1631 5.800239 CAGAATGAGTAAGGAAAACCGTCCT 60.800 44.000 0.00 0.00 45.45 3.85
1496 1659 2.037381 TCCAGCTCATGCAATGCAAAAA 59.963 40.909 13.45 0.00 46.21 1.94
1497 1660 1.619332 TCCAGCTCATGCAATGCAAAA 59.381 42.857 13.45 2.02 46.21 2.44
1498 1661 1.203758 CTCCAGCTCATGCAATGCAAA 59.796 47.619 13.45 2.42 46.21 3.68
1499 1662 0.815095 CTCCAGCTCATGCAATGCAA 59.185 50.000 13.45 0.00 46.21 4.08
1500 1663 0.323087 ACTCCAGCTCATGCAATGCA 60.323 50.000 11.44 11.44 46.21 3.96
1501 1664 1.671979 TACTCCAGCTCATGCAATGC 58.328 50.000 0.00 0.00 46.21 3.56
1503 1666 3.572632 ACATACTCCAGCTCATGCAAT 57.427 42.857 0.00 0.00 42.74 3.56
1504 1667 4.694760 ATACATACTCCAGCTCATGCAA 57.305 40.909 0.00 0.00 42.74 4.08
1505 1668 4.694760 AATACATACTCCAGCTCATGCA 57.305 40.909 0.00 0.00 42.74 3.96
1506 1669 6.708054 ACTTAAATACATACTCCAGCTCATGC 59.292 38.462 0.00 0.00 40.05 4.06
1507 1670 9.197694 GTACTTAAATACATACTCCAGCTCATG 57.802 37.037 0.00 0.00 0.00 3.07
1508 1671 8.924303 TGTACTTAAATACATACTCCAGCTCAT 58.076 33.333 0.00 0.00 29.97 2.90
1509 1672 8.301252 TGTACTTAAATACATACTCCAGCTCA 57.699 34.615 0.00 0.00 29.97 4.26
1510 1673 9.250624 CTTGTACTTAAATACATACTCCAGCTC 57.749 37.037 0.00 0.00 35.04 4.09
1511 1674 8.204836 CCTTGTACTTAAATACATACTCCAGCT 58.795 37.037 0.00 0.00 35.04 4.24
1512 1675 7.985752 ACCTTGTACTTAAATACATACTCCAGC 59.014 37.037 0.00 0.00 35.04 4.85
1520 1683 9.456147 TGCACATTACCTTGTACTTAAATACAT 57.544 29.630 0.00 0.00 35.04 2.29
1521 1684 8.850007 TGCACATTACCTTGTACTTAAATACA 57.150 30.769 0.00 0.00 33.18 2.29
1522 1685 9.550811 GTTGCACATTACCTTGTACTTAAATAC 57.449 33.333 0.00 0.00 0.00 1.89
1523 1686 8.444715 CGTTGCACATTACCTTGTACTTAAATA 58.555 33.333 0.00 0.00 0.00 1.40
1524 1687 7.173562 TCGTTGCACATTACCTTGTACTTAAAT 59.826 33.333 0.00 0.00 0.00 1.40
1525 1688 6.482641 TCGTTGCACATTACCTTGTACTTAAA 59.517 34.615 0.00 0.00 0.00 1.52
1526 1689 5.990386 TCGTTGCACATTACCTTGTACTTAA 59.010 36.000 0.00 0.00 0.00 1.85
1527 1690 5.539979 TCGTTGCACATTACCTTGTACTTA 58.460 37.500 0.00 0.00 0.00 2.24
1528 1691 4.382291 TCGTTGCACATTACCTTGTACTT 58.618 39.130 0.00 0.00 0.00 2.24
1529 1692 3.994392 CTCGTTGCACATTACCTTGTACT 59.006 43.478 0.00 0.00 0.00 2.73
1530 1693 3.424433 GCTCGTTGCACATTACCTTGTAC 60.424 47.826 0.00 0.00 42.31 2.90
1651 1821 2.943033 TCTATCGTCTTCTGCGTCATCA 59.057 45.455 0.00 0.00 0.00 3.07
1657 1827 7.483375 CCTTATATTTCTCTATCGTCTTCTGCG 59.517 40.741 0.00 0.00 0.00 5.18
1663 1833 7.450124 TTCGCCTTATATTTCTCTATCGTCT 57.550 36.000 0.00 0.00 0.00 4.18
1664 1834 6.251801 GCTTCGCCTTATATTTCTCTATCGTC 59.748 42.308 0.00 0.00 0.00 4.20
1686 1856 3.737355 GCTTCTAACTAATCGACCGGCTT 60.737 47.826 0.00 0.00 0.00 4.35
1687 1857 2.223758 GCTTCTAACTAATCGACCGGCT 60.224 50.000 0.00 0.00 0.00 5.52
1688 1858 2.125685 GCTTCTAACTAATCGACCGGC 58.874 52.381 0.00 0.00 0.00 6.13
1689 1859 3.712091 AGCTTCTAACTAATCGACCGG 57.288 47.619 0.00 0.00 0.00 5.28
1690 1860 4.676018 GCTTAGCTTCTAACTAATCGACCG 59.324 45.833 0.00 0.00 0.00 4.79
1691 1861 5.589192 TGCTTAGCTTCTAACTAATCGACC 58.411 41.667 5.60 0.00 0.00 4.79
1692 1862 6.291902 GCTTGCTTAGCTTCTAACTAATCGAC 60.292 42.308 5.60 0.00 46.77 4.20
1693 1863 5.749109 GCTTGCTTAGCTTCTAACTAATCGA 59.251 40.000 5.60 0.00 46.77 3.59
1694 1864 5.968604 GCTTGCTTAGCTTCTAACTAATCG 58.031 41.667 5.60 0.00 46.77 3.34
1708 1878 2.636830 AGTATGCCTGTGCTTGCTTAG 58.363 47.619 0.00 0.00 34.65 2.18
1709 1879 2.787473 AGTATGCCTGTGCTTGCTTA 57.213 45.000 0.00 0.00 34.65 3.09
1710 1880 1.915141 AAGTATGCCTGTGCTTGCTT 58.085 45.000 0.00 0.00 40.86 3.91
1711 1881 1.542915 CAAAGTATGCCTGTGCTTGCT 59.457 47.619 0.00 0.00 38.85 3.91
1712 1882 1.403249 CCAAAGTATGCCTGTGCTTGC 60.403 52.381 0.00 0.00 38.71 4.01
1713 1883 1.888512 ACCAAAGTATGCCTGTGCTTG 59.111 47.619 0.00 0.00 38.71 4.01
1752 1960 4.752101 TCTCAAGAAGAAGAAAAAGAGCCG 59.248 41.667 0.00 0.00 0.00 5.52
1761 1969 8.690884 CCTAGTACATCATCTCAAGAAGAAGAA 58.309 37.037 0.00 0.00 35.48 2.52
1763 1971 6.922957 GCCTAGTACATCATCTCAAGAAGAAG 59.077 42.308 0.00 0.00 37.61 2.85
1798 2051 2.989909 TCATGTCTGGTTGCATACAGG 58.010 47.619 15.57 5.48 35.47 4.00
1814 2067 7.201435 GCTTGCATGCAATAATATGTCATCATG 60.201 37.037 31.96 15.69 35.20 3.07
1954 2221 1.473788 GGTAGGTGTTTGGTGACGTGT 60.474 52.381 0.00 0.00 0.00 4.49
2042 2312 1.203523 GAGAAGAGTGACATGTCGCCT 59.796 52.381 30.72 24.19 40.77 5.52
2144 2416 8.731605 CACAAGTTGTACTCTCTCTGTATAAGA 58.268 37.037 8.49 0.00 0.00 2.10
2148 2420 6.902771 ACACAAGTTGTACTCTCTCTGTAT 57.097 37.500 8.49 0.00 36.32 2.29
2156 2428 5.290158 CACGTGTTTACACAAGTTGTACTCT 59.710 40.000 8.49 0.00 42.28 3.24
2165 2437 5.151632 ACTTTAGCACGTGTTTACACAAG 57.848 39.130 18.38 12.30 46.75 3.16
2198 2470 2.943033 CCCCTTGATTTATCCACGACAC 59.057 50.000 0.00 0.00 0.00 3.67
2247 2519 2.098215 TTTGCATGTTTGTCACGTCG 57.902 45.000 0.00 0.00 0.00 5.12
2300 2572 6.142818 ACAGCTGCAACACACTATTTTTAA 57.857 33.333 15.27 0.00 0.00 1.52
2301 2573 5.766150 ACAGCTGCAACACACTATTTTTA 57.234 34.783 15.27 0.00 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.