AutoCloner

Multiple sequence alignment - TraesCS3D01G047700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3D01G047700	chr3D	100.000	3425	0	0	1	3425	17748974	17745550	0.000000e+00	6325.0
1	TraesCS3D01G047700	chr3D	85.714	1960	226	24	455	2404	17779086	17777171	0.000000e+00	2019.0
2	TraesCS3D01G047700	chrUn	92.274	3430	185	41	12	3411	37706273	37702894	0.000000e+00	4793.0
3	TraesCS3D01G047700	chrUn	85.684	1865	200	35	592	2441	37503980	37505792	0.000000e+00	1903.0
4	TraesCS3D01G047700	chrUn	84.291	1305	185	16	1107	2404	37181801	37180510	0.000000e+00	1256.0
5	TraesCS3D01G047700	chrUn	87.092	643	62	11	477	1111	37795659	37796288	0.000000e+00	708.0
6	TraesCS3D01G047700	chrUn	88.732	497	53	3	1015	1509	37869673	37870168	3.780000e-169	604.0
7	TraesCS3D01G047700	chrUn	88.732	497	53	3	1015	1509	333562661	333563156	3.780000e-169	604.0
8	TraesCS3D01G047700	chrUn	82.385	369	53	8	636	1002	37869203	37869561	9.230000e-81	311.0
9	TraesCS3D01G047700	chrUn	82.385	369	53	8	636	1002	333562191	333562549	9.230000e-81	311.0
10	TraesCS3D01G047700	chrUn	82.938	211	36	0	1640	1850	10147370	10147580	1.250000e-44	191.0
11	TraesCS3D01G047700	chrUn	93.478	92	6	0	469	560	37503588	37503679	1.660000e-28	137.0
12	TraesCS3D01G047700	chr3A	92.160	2449	157	20	1	2436	18832051	18829625	0.000000e+00	3426.0
13	TraesCS3D01G047700	chr3A	85.322	1969	225	26	456	2404	18837876	18835952	0.000000e+00	1977.0
14	TraesCS3D01G047700	chr3A	91.980	586	43	3	2459	3042	18825486	18824903	0.000000e+00	819.0
15	TraesCS3D01G047700	chr3A	89.151	212	12	8	3149	3356	18824774	18824570	1.580000e-63	254.0
16	TraesCS3D01G047700	chr3A	83.453	139	19	4	2983	3119	691993857	691993721	3.590000e-25	126.0
17	TraesCS3D01G047700	chr4B	79.380	839	161	8	1011	1849	577016234	577015408	6.370000e-162	580.0
18	TraesCS3D01G047700	chr4B	81.401	414	60	14	1975	2381	644477683	644478086	4.260000e-84	322.0
19	TraesCS3D01G047700	chr4B	80.676	414	63	14	1975	2381	644366763	644366360	4.290000e-79	305.0
20	TraesCS3D01G047700	chr4B	80.128	156	29	2	2986	3140	411519127	411518973	7.770000e-22	115.0
21	TraesCS3D01G047700	chr4D	78.947	779	162	2	1073	1850	500526968	500527745	2.340000e-146	529.0
22	TraesCS3D01G047700	chr4D	80.918	414	65	11	1975	2381	500529094	500529500	7.130000e-82	315.0
23	TraesCS3D01G047700	chr2D	84.177	158	22	3	2984	3140	645575862	645575707	2.130000e-32	150.0
24	TraesCS3D01G047700	chr2D	82.787	122	21	0	131	252	207221334	207221455	3.610000e-20	110.0
25	TraesCS3D01G047700	chr5A	86.992	123	15	1	2997	3118	598349854	598349976	1.660000e-28	137.0
26	TraesCS3D01G047700	chr2A	81.752	137	22	3	2984	3118	759124884	759125019	1.000000e-20	111.0
27	TraesCS3D01G047700	chr7D	79.487	156	31	1	2986	3140	417791327	417791172	3.610000e-20	110.0
28	TraesCS3D01G047700	chr7D	83.582	67	10	1	223	289	109518467	109518402	1.030000e-05	62.1
29	TraesCS3D01G047700	chr1A	82.927	123	20	1	2997	3118	144560272	144560394	3.610000e-20	110.0
30	TraesCS3D01G047700	chr7A	94.595	37	2	0	222	258	198406326	198406362	1.330000e-04	58.4

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3D01G047700	chr3D	17745550	17748974	3424	True	6325.0	6325	100.0000	1	3425	1	chr3D.!!$R1	3424
1	TraesCS3D01G047700	chr3D	17777171	17779086	1915	True	2019.0	2019	85.7140	455	2404	1	chr3D.!!$R2	1949
2	TraesCS3D01G047700	chrUn	37702894	37706273	3379	True	4793.0	4793	92.2740	12	3411	1	chrUn.!!$R2	3399
3	TraesCS3D01G047700	chrUn	37180510	37181801	1291	True	1256.0	1256	84.2910	1107	2404	1	chrUn.!!$R1	1297
4	TraesCS3D01G047700	chrUn	37503588	37505792	2204	False	1020.0	1903	89.5810	469	2441	2	chrUn.!!$F3	1972
5	TraesCS3D01G047700	chrUn	37795659	37796288	629	False	708.0	708	87.0920	477	1111	1	chrUn.!!$F2	634
6	TraesCS3D01G047700	chrUn	37869203	37870168	965	False	457.5	604	85.5585	636	1509	2	chrUn.!!$F4	873
7	TraesCS3D01G047700	chrUn	333562191	333563156	965	False	457.5	604	85.5585	636	1509	2	chrUn.!!$F5	873
8	TraesCS3D01G047700	chr3A	18829625	18837876	8251	True	2701.5	3426	88.7410	1	2436	2	chr3A.!!$R3	2435
9	TraesCS3D01G047700	chr3A	18824570	18825486	916	True	536.5	819	90.5655	2459	3356	2	chr3A.!!$R2	897
10	TraesCS3D01G047700	chr4B	577015408	577016234	826	True	580.0	580	79.3800	1011	1849	1	chr4B.!!$R2	838
11	TraesCS3D01G047700	chr4D	500526968	500529500	2532	False	422.0	529	79.9325	1073	2381	2	chr4D.!!$F1	1308

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
265	6097	0.184933	CCCTCCCACCAACTGTTTCA	59.815	55.0	0.0	0.0	0.0	2.69	F
840	6982	0.317938	GCGTATAGTCCTGTCCTGCG	60.318	60.0	0.0	0.0	0.0	5.18	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1692	7939	0.251916	CCTTAACGATGGACCTGGCA	59.748	55.0	0.0	0.0	0.0	4.92	R
2580	10114	0.179073	AGACACAGGCACAGACACAC	60.179	55.0	0.0	0.0	0.0	3.82	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
80	5904	4.317529	GCTAGCTAGCTCACGCAG	57.682	61.111	33.71	13.93	45.62	5.18
91	5915	4.801624	CACGCAGCAGAGCCGCTA	62.802	66.667	0.00	0.00	41.38	4.26
92	5916	4.504916	ACGCAGCAGAGCCGCTAG	62.505	66.667	0.00	0.00	41.38	3.42
166	5995	4.680237	CAGCTCACGGGTCGGCAA	62.680	66.667	0.00	0.00	0.00	4.52
201	6030	1.737236	TCATCGGAATTGAGGCGTTTG	59.263	47.619	0.00	0.00	0.00	2.93
216	6045	0.600782	GTTTGGGTGAGGTCGCGTTA	60.601	55.000	5.77	0.00	0.00	3.18
219	6048	2.345760	GGGTGAGGTCGCGTTAGGA	61.346	63.158	5.77	0.00	0.00	2.94
265	6097	0.184933	CCCTCCCACCAACTGTTTCA	59.815	55.000	0.00	0.00	0.00	2.69
318	6151	8.754080	CCCCAATCTCGTAGATATAGAGAAAAT	58.246	37.037	0.00	0.00	43.24	1.82
322	6155	8.588290	ATCTCGTAGATATAGAGAAAATGGCT	57.412	34.615	0.00	0.00	43.24	4.75
334	6167	3.953612	AGAAAATGGCTCGGAATATGCAA	59.046	39.130	0.00	0.00	0.00	4.08
426	6261	2.027003	TAGACCGGCGGTTATTTTGG	57.973	50.000	34.58	2.21	35.25	3.28
430	6265	2.492560	GGCGGTTATTTTGGCGGG	59.507	61.111	0.00	0.00	0.00	6.13
433	6268	1.587933	GCGGTTATTTTGGCGGGTGA	61.588	55.000	0.00	0.00	0.00	4.02
466	6301	6.989169	ACATGATCTGCTAGAGATGGTTTAAC	59.011	38.462	0.00	0.00	41.91	2.01
515	6350	2.291153	ACCCTCCACTTCATCAACCATG	60.291	50.000	0.00	0.00	0.00	3.66
520	6355	2.494471	CCACTTCATCAACCATGTGCAT	59.506	45.455	0.00	0.00	33.66	3.96
595	6697	1.073923	AGCCCTCCACGTCATCTTTTT	59.926	47.619	0.00	0.00	0.00	1.94
649	6756	6.101296	TCCATACTCCATAGACAGAGTACAGA	59.899	42.308	2.20	0.72	45.69	3.41
718	6853	7.792374	TGAGCTGTCCATGAAACTAATTATC	57.208	36.000	0.00	0.00	0.00	1.75
719	6854	7.568349	TGAGCTGTCCATGAAACTAATTATCT	58.432	34.615	0.00	0.00	0.00	1.98
720	6855	7.712639	TGAGCTGTCCATGAAACTAATTATCTC	59.287	37.037	0.00	0.00	0.00	2.75
721	6856	6.995091	AGCTGTCCATGAAACTAATTATCTCC	59.005	38.462	0.00	0.00	0.00	3.71
784	6921	1.267806	CATCAACAAACAGAGCCGCTT	59.732	47.619	0.00	0.00	0.00	4.68
840	6982	0.317938	GCGTATAGTCCTGTCCTGCG	60.318	60.000	0.00	0.00	0.00	5.18
903	7045	1.617755	AAATGTCGACGAGCACAGCG	61.618	55.000	11.62	0.00	0.00	5.18
966	7109	6.995511	ATTTCTGTAGCCGTAGCAAAAATA	57.004	33.333	0.00	0.00	43.56	1.40
968	7111	5.080969	TCTGTAGCCGTAGCAAAAATAGT	57.919	39.130	0.00	0.00	43.56	2.12
1348	7594	1.333177	GATCTACAGCCTCGTCCCAT	58.667	55.000	0.00	0.00	0.00	4.00
1478	7725	3.522553	CCGACTGGTTCAAGAAGGATAC	58.477	50.000	0.00	0.00	0.00	2.24
1692	7939	1.535444	TGGTGGTGATGGGACGACT	60.535	57.895	0.00	0.00	0.00	4.18
1842	8089	2.237143	ACCTGCTCAAGCTGTAATGCTA	59.763	45.455	3.32	0.00	43.24	3.49
1914	8955	9.400638	CTCGTGATTCTATACCTCATTAAAGTC	57.599	37.037	0.00	0.00	0.00	3.01
2148	9681	0.543749	CCATTCCTTCCCGAGAAGCT	59.456	55.000	0.31	0.00	46.97	3.74
2336	9869	6.935167	ACAAAATTGTCAAGAAACTTGGAGT	58.065	32.000	10.84	0.00	36.50	3.85
2494	10028	4.201724	CGTCAGTGCCATACTTTCTAAAGC	60.202	45.833	2.37	0.00	37.60	3.51
2557	10091	3.193267	TGCCTGGTCACAAAATAATCTGC	59.807	43.478	0.00	0.00	0.00	4.26
2580	10114	2.972569	CGTGCATGTGTTTGTATGTGTG	59.027	45.455	0.00	0.00	0.00	3.82
2591	10125	2.209273	TGTATGTGTGTGTGTCTGTGC	58.791	47.619	0.00	0.00	0.00	4.57
2604	10138	0.541392	TCTGTGCCTGTGTCTGTGTT	59.459	50.000	0.00	0.00	0.00	3.32
2615	10149	6.017440	GCCTGTGTCTGTGTTAATTAGTTTCA	60.017	38.462	0.00	0.00	0.00	2.69
2626	10160	9.233232	GTGTTAATTAGTTTCAAGAAGTGTTGG	57.767	33.333	0.00	0.00	0.00	3.77
2628	10162	8.626526	GTTAATTAGTTTCAAGAAGTGTTGGGA	58.373	33.333	0.00	0.00	0.00	4.37
2689	10223	4.973168	TCCAACAAGCTGAGACATTAAGT	58.027	39.130	0.00	0.00	0.00	2.24
2998	10536	2.442212	TTACGCGAACCAATCTGTGA	57.558	45.000	15.93	0.00	0.00	3.58
3016	10554	3.527253	TGTGATTGGATGGTTAGGTGGAT	59.473	43.478	0.00	0.00	0.00	3.41
3051	10590	0.328258	CCACCAAGGTAAGGTCCTGG	59.672	60.000	0.00	0.00	37.23	4.45
3056	10595	1.073923	CAAGGTAAGGTCCTGGTGCTT	59.926	52.381	0.00	0.00	37.93	3.91
3068	10607	2.762327	CCTGGTGCTTGCATTTATCCTT	59.238	45.455	0.00	0.00	0.00	3.36
3071	10610	3.193267	TGGTGCTTGCATTTATCCTTGAC	59.807	43.478	0.00	0.00	0.00	3.18
3079	10618	7.975616	GCTTGCATTTATCCTTGACTTATTTCA	59.024	33.333	0.00	0.00	0.00	2.69
3089	10628	7.165485	TCCTTGACTTATTTCAGGATTTTCGA	58.835	34.615	0.00	0.00	0.00	3.71
3114	10653	1.126296	GCGCGTTTAGTGAAAGGAGAC	59.874	52.381	8.43	0.00	33.62	3.36
3141	10680	2.688446	TGTTGACTACGAGGAGCCTATG	59.312	50.000	0.00	0.00	0.00	2.23
3147	10728	3.773119	ACTACGAGGAGCCTATGGAAAAA	59.227	43.478	0.00	0.00	0.00	1.94
3184	10765	6.782494	ACCAGATCAACAAAAGGAAAAGGTAT	59.218	34.615	0.00	0.00	0.00	2.73
3213	10795	6.174720	ACCATAGGTGACACCAGTATAATG	57.825	41.667	26.30	16.77	41.95	1.90
3369	10958	2.995258	GCCGGACGTTGTGAATAGTAAA	59.005	45.455	5.05	0.00	0.00	2.01
3372	10961	4.865925	CCGGACGTTGTGAATAGTAAATCA	59.134	41.667	0.00	0.00	0.00	2.57
3373	10962	5.005394	CCGGACGTTGTGAATAGTAAATCAG	59.995	44.000	0.00	0.00	0.00	2.90

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
2	3	4.729918	CACACTGCCCCCTGCTCC	62.730	72.222	0.00	0.00	42.00	4.70
6	7	4.666253	CCACCACACTGCCCCCTG	62.666	72.222	0.00	0.00	0.00	4.45
9	10	4.912395	TTGCCACCACACTGCCCC	62.912	66.667	0.00	0.00	0.00	5.80
10	11	2.690653	TAGTTGCCACCACACTGCCC	62.691	60.000	0.00	0.00	0.00	5.36
12	13	1.856265	GCTAGTTGCCACCACACTGC	61.856	60.000	0.00	0.00	35.15	4.40
13	14	0.250467	AGCTAGTTGCCACCACACTG	60.250	55.000	0.00	0.00	44.23	3.66
14	15	1.276421	CTAGCTAGTTGCCACCACACT	59.724	52.381	12.92	0.00	44.23	3.55
15	16	1.726853	CTAGCTAGTTGCCACCACAC	58.273	55.000	12.92	0.00	44.23	3.82
160	5988	1.991167	ACCGGACCCTAATTGCCGA	60.991	57.895	9.46	0.00	46.29	5.54
161	5989	1.817941	CACCGGACCCTAATTGCCG	60.818	63.158	9.46	0.00	43.20	5.69
162	5990	1.453197	CCACCGGACCCTAATTGCC	60.453	63.158	9.46	0.00	0.00	4.52
166	5995	1.129058	GATGACCACCGGACCCTAAT	58.871	55.000	9.46	0.00	0.00	1.73
188	6017	1.247567	CTCACCCAAACGCCTCAATT	58.752	50.000	0.00	0.00	0.00	2.32
189	6018	0.609131	CCTCACCCAAACGCCTCAAT	60.609	55.000	0.00	0.00	0.00	2.57
201	6030	1.880819	TTCCTAACGCGACCTCACCC	61.881	60.000	15.93	0.00	0.00	4.61
216	6045	1.000896	CCCGCCATGGTCTTTTCCT	60.001	57.895	14.67	0.00	35.15	3.36
219	6048	1.678970	GCTCCCGCCATGGTCTTTT	60.679	57.895	14.67	0.00	35.15	2.27
318	6151	2.288666	GAACTTGCATATTCCGAGCCA	58.711	47.619	0.00	0.00	0.00	4.75
348	6181	3.181514	CGCAAAATCGTCCGTCCTTTAAT	60.182	43.478	0.00	0.00	0.00	1.40
349	6182	2.158058	CGCAAAATCGTCCGTCCTTTAA	59.842	45.455	0.00	0.00	0.00	1.52
352	6185	1.296056	CCGCAAAATCGTCCGTCCTT	61.296	55.000	0.00	0.00	0.00	3.36
402	6237	1.117150	ATAACCGCCGGTCTATGTGT	58.883	50.000	10.32	0.00	33.12	3.72
404	6239	2.940410	CAAAATAACCGCCGGTCTATGT	59.060	45.455	10.32	2.27	33.12	2.29
406	6241	2.567985	CCAAAATAACCGCCGGTCTAT	58.432	47.619	10.32	7.19	33.12	1.98
426	6261	2.156098	TCATGTAAAAAGGTCACCCGC	58.844	47.619	0.00	0.00	35.12	6.13
430	6265	5.886960	AGCAGATCATGTAAAAAGGTCAC	57.113	39.130	0.00	0.00	0.00	3.67
433	6268	7.187824	TCTCTAGCAGATCATGTAAAAAGGT	57.812	36.000	0.00	0.00	0.00	3.50
443	6278	7.372260	AGTTAAACCATCTCTAGCAGATCAT	57.628	36.000	0.00	0.00	40.20	2.45
444	6279	6.798427	AGTTAAACCATCTCTAGCAGATCA	57.202	37.500	0.00	0.00	40.20	2.92
466	6301	6.293298	GCATGTGCTGAGAATGGATAAACTAG	60.293	42.308	0.00	0.00	38.21	2.57
480	6315	0.524862	GAGGGTTTGCATGTGCTGAG	59.475	55.000	6.55	0.00	42.66	3.35
595	6697	9.405587	GAGATCGAATAATTTGTTGGTGAAAAA	57.594	29.630	0.00	0.00	0.00	1.94
718	6853	2.088104	TCCACTATACTGCCAGGGAG	57.912	55.000	6.39	6.39	0.00	4.30
719	6854	2.561209	TTCCACTATACTGCCAGGGA	57.439	50.000	0.00	0.00	0.00	4.20
720	6855	2.158755	CCTTTCCACTATACTGCCAGGG	60.159	54.545	0.00	0.00	0.00	4.45
721	6856	2.771943	TCCTTTCCACTATACTGCCAGG	59.228	50.000	0.00	0.00	0.00	4.45
809	6951	0.249280	CTATACGCGTCCACATGCCA	60.249	55.000	18.63	0.00	0.00	4.92
966	7109	3.849563	TGGGCGGTTTATATAGCAACT	57.150	42.857	0.00	0.00	0.00	3.16
968	7111	2.882137	GCTTGGGCGGTTTATATAGCAA	59.118	45.455	0.00	0.00	0.00	3.91
1348	7594	0.406750	TCCACGAGGAGGTAGGACAA	59.593	55.000	0.00	0.00	39.61	3.18
1692	7939	0.251916	CCTTAACGATGGACCTGGCA	59.748	55.000	0.00	0.00	0.00	4.92
1914	8955	8.610035	TGTACATACTAGTGATACAAACTCTCG	58.390	37.037	5.39	0.00	0.00	4.04
2148	9681	8.089625	TGTCTATGATAATCACTTTTCCTCCA	57.910	34.615	0.00	0.00	0.00	3.86
2336	9869	0.809385	GACCTCGATGACACCTCGAA	59.191	55.000	3.02	0.00	43.85	3.71
2481	10015	7.039784	TCCATTGTGCTTTGCTTTAGAAAGTAT	60.040	33.333	4.05	0.00	38.28	2.12
2494	10028	7.274250	GCTACTAATTTTCTCCATTGTGCTTTG	59.726	37.037	0.00	0.00	0.00	2.77
2557	10091	1.249598	CATACAAACACATGCACGCG	58.750	50.000	3.53	3.53	0.00	6.01
2580	10114	0.179073	AGACACAGGCACAGACACAC	60.179	55.000	0.00	0.00	0.00	3.82
2591	10125	7.490962	TGAAACTAATTAACACAGACACAGG	57.509	36.000	0.00	0.00	0.00	4.00
2604	10138	7.776030	TGTCCCAACACTTCTTGAAACTAATTA	59.224	33.333	0.00	0.00	0.00	1.40
2884	10421	2.465860	TTGACGGTGGTGGTTATCTG	57.534	50.000	0.00	0.00	0.00	2.90
2885	10422	2.551504	GGTTTGACGGTGGTGGTTATCT	60.552	50.000	0.00	0.00	0.00	1.98
2886	10423	1.808343	GGTTTGACGGTGGTGGTTATC	59.192	52.381	0.00	0.00	0.00	1.75
2912	10450	1.068352	GGGATATGGCCAGGAGGGTT	61.068	60.000	13.05	0.00	39.65	4.11
2998	10536	4.104738	CCACTATCCACCTAACCATCCAAT	59.895	45.833	0.00	0.00	0.00	3.16
3051	10590	4.708726	AGTCAAGGATAAATGCAAGCAC	57.291	40.909	0.00	0.00	0.00	4.40
3056	10595	7.833682	TCCTGAAATAAGTCAAGGATAAATGCA	59.166	33.333	0.00	0.00	0.00	3.96
3068	10607	6.160684	TCGTCGAAAATCCTGAAATAAGTCA	58.839	36.000	0.00	0.00	0.00	3.41
3071	10610	5.904080	GCATCGTCGAAAATCCTGAAATAAG	59.096	40.000	0.00	0.00	0.00	1.73
3079	10618	1.752501	CGCGCATCGTCGAAAATCCT	61.753	55.000	8.75	0.00	0.00	3.24
3114	10653	1.538512	TCCTCGTAGTCAACAGGAACG	59.461	52.381	0.00	0.00	34.47	3.95
3118	10657	0.173708	GGCTCCTCGTAGTCAACAGG	59.826	60.000	0.00	0.00	0.00	4.00
3147	10728	4.828939	TGTTGATCTGGTCATGAAAAGCTT	59.171	37.500	0.00	0.00	36.54	3.74
3213	10795	9.980780	GAAGAAGAAAACAGCAGAATAATACTC	57.019	33.333	0.00	0.00	0.00	2.59

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.