Multiple sequence alignment - TraesCS3D01G046200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G046200 chr3D 100.000 2950 0 0 1 2950 17531269 17528320 0.000000e+00 5448.0
1 TraesCS3D01G046200 chr3D 78.711 1071 163 34 655 1683 17364639 17365686 0.000000e+00 654.0
2 TraesCS3D01G046200 chr3D 81.204 548 65 20 1017 1536 18782826 18783363 9.840000e-110 407.0
3 TraesCS3D01G046200 chr3D 87.550 249 30 1 1534 1781 18783580 18783828 1.340000e-73 287.0
4 TraesCS3D01G046200 chr3D 78.648 281 31 15 2103 2376 17365885 17366143 3.040000e-35 159.0
5 TraesCS3D01G046200 chr3A 88.251 1464 94 27 466 1862 19359654 19361106 0.000000e+00 1679.0
6 TraesCS3D01G046200 chr3A 93.404 470 23 3 2 467 19359158 19359623 0.000000e+00 689.0
7 TraesCS3D01G046200 chr3A 77.835 1164 152 48 655 1760 19483549 19482434 8.980000e-175 623.0
8 TraesCS3D01G046200 chr3A 85.855 509 44 19 1886 2377 19361100 19361597 1.570000e-142 516.0
9 TraesCS3D01G046200 chr3A 78.543 741 136 14 990 1714 26201664 26202397 1.600000e-127 466.0
10 TraesCS3D01G046200 chr3A 84.112 321 27 14 2597 2895 19354858 19355176 3.720000e-74 289.0
11 TraesCS3D01G046200 chr3B 92.315 1093 67 8 975 2065 27492927 27494004 0.000000e+00 1537.0
12 TraesCS3D01G046200 chr3B 79.957 928 140 25 782 1684 24935539 24936445 2.480000e-180 641.0
13 TraesCS3D01G046200 chr3B 81.818 726 123 4 1066 1788 29528899 29528180 4.210000e-168 601.0
14 TraesCS3D01G046200 chr3B 85.866 283 27 9 2662 2940 24932076 24932349 3.720000e-74 289.0
15 TraesCS3D01G046200 chr2B 92.000 50 3 1 2891 2940 167509466 167509514 5.280000e-08 69.4
16 TraesCS3D01G046200 chrUn 100.000 29 0 0 1947 1975 346500164 346500136 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G046200 chr3D 17528320 17531269 2949 True 5448.00 5448 100.0000 1 2950 1 chr3D.!!$R1 2949
1 TraesCS3D01G046200 chr3D 17364639 17366143 1504 False 406.50 654 78.6795 655 2376 2 chr3D.!!$F1 1721
2 TraesCS3D01G046200 chr3D 18782826 18783828 1002 False 347.00 407 84.3770 1017 1781 2 chr3D.!!$F2 764
3 TraesCS3D01G046200 chr3A 19354858 19361597 6739 False 793.25 1679 87.9055 2 2895 4 chr3A.!!$F2 2893
4 TraesCS3D01G046200 chr3A 19482434 19483549 1115 True 623.00 623 77.8350 655 1760 1 chr3A.!!$R1 1105
5 TraesCS3D01G046200 chr3A 26201664 26202397 733 False 466.00 466 78.5430 990 1714 1 chr3A.!!$F1 724
6 TraesCS3D01G046200 chr3B 27492927 27494004 1077 False 1537.00 1537 92.3150 975 2065 1 chr3B.!!$F1 1090
7 TraesCS3D01G046200 chr3B 29528180 29528899 719 True 601.00 601 81.8180 1066 1788 1 chr3B.!!$R1 722
8 TraesCS3D01G046200 chr3B 24932076 24936445 4369 False 465.00 641 82.9115 782 2940 2 chr3B.!!$F2 2158

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
891 5291 0.107831 TACTCCACTTGCTTGCCGTT 59.892 50.0 0.0 0.0 0.0 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2795 7647 0.036164 CTGTGGATCCCGTGGTTTGA 59.964 55.0 9.9 0.0 0.0 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
184 4484 5.689819 AGAAAACGAAATCCATCAGAAACG 58.310 37.500 0.00 0.00 0.00 3.60
236 4536 3.259902 GGTCTTAGCCCACTAGTTTTCG 58.740 50.000 0.00 0.00 0.00 3.46
239 4539 5.473039 GTCTTAGCCCACTAGTTTTCGTAA 58.527 41.667 0.00 0.00 0.00 3.18
240 4540 5.575995 GTCTTAGCCCACTAGTTTTCGTAAG 59.424 44.000 0.00 0.00 0.00 2.34
241 4541 2.696506 AGCCCACTAGTTTTCGTAAGC 58.303 47.619 0.00 0.00 37.18 3.09
242 4542 1.736126 GCCCACTAGTTTTCGTAAGCC 59.264 52.381 0.00 0.00 37.18 4.35
243 4543 2.353323 CCCACTAGTTTTCGTAAGCCC 58.647 52.381 0.00 0.00 37.18 5.19
262 4562 0.171007 CAGGCAAATACAGCAACCCG 59.829 55.000 0.00 0.00 0.00 5.28
284 4584 4.973051 CGCATCCTCGCTCATACTTATATC 59.027 45.833 0.00 0.00 0.00 1.63
285 4585 5.285651 GCATCCTCGCTCATACTTATATCC 58.714 45.833 0.00 0.00 0.00 2.59
286 4586 5.163509 GCATCCTCGCTCATACTTATATCCA 60.164 44.000 0.00 0.00 0.00 3.41
322 4624 5.471797 TGAGTTTTATTTGAGGATCGTTGCA 59.528 36.000 0.00 0.00 38.61 4.08
329 4631 4.424061 TTGAGGATCGTTGCATTGAAAG 57.576 40.909 0.00 0.00 38.61 2.62
338 4640 3.252215 CGTTGCATTGAAAGTAGTTGGGA 59.748 43.478 0.00 0.00 0.00 4.37
342 4644 4.237724 GCATTGAAAGTAGTTGGGAAAGC 58.762 43.478 0.00 0.00 0.00 3.51
346 4648 2.180432 AAGTAGTTGGGAAAGCGACC 57.820 50.000 0.00 0.00 0.00 4.79
347 4649 1.349067 AGTAGTTGGGAAAGCGACCT 58.651 50.000 0.00 0.00 0.00 3.85
348 4650 1.697982 AGTAGTTGGGAAAGCGACCTT 59.302 47.619 0.00 0.00 0.00 3.50
470 4807 6.147164 CGGACACTATTTAGAACTCTGCAAAA 59.853 38.462 0.00 0.00 0.00 2.44
472 4809 9.162764 GGACACTATTTAGAACTCTGCAAAATA 57.837 33.333 0.00 0.00 0.00 1.40
494 4831 3.397849 AACCCGTGAACTCTAGGTTTC 57.602 47.619 0.00 0.00 37.55 2.78
501 4838 4.566987 GTGAACTCTAGGTTTCAACGGAT 58.433 43.478 8.10 0.00 38.41 4.18
507 4844 3.830178 TCTAGGTTTCAACGGATGTCTCA 59.170 43.478 0.00 0.00 0.00 3.27
522 4859 2.172505 TGTCTCACCTGCAAAGAAAGGA 59.827 45.455 0.00 0.00 37.01 3.36
527 4864 5.363580 TCTCACCTGCAAAGAAAGGAAAATT 59.636 36.000 0.00 0.00 37.01 1.82
529 4866 4.512571 CACCTGCAAAGAAAGGAAAATTGG 59.487 41.667 0.00 0.00 37.01 3.16
587 4925 8.910944 CCAATCATTGTAAGGATCTTCATTTCT 58.089 33.333 0.00 0.00 0.00 2.52
617 4955 9.250624 GATAGTTACCTATCAAGTGTGAATGTC 57.749 37.037 2.59 0.00 45.99 3.06
618 4956 6.100004 AGTTACCTATCAAGTGTGAATGTCG 58.900 40.000 0.00 0.00 37.30 4.35
622 4960 5.417894 ACCTATCAAGTGTGAATGTCGTAGA 59.582 40.000 0.00 0.00 37.30 2.59
673 5036 2.353704 CGACAAGAGCATGAAGTACCCA 60.354 50.000 0.00 0.00 0.00 4.51
695 5058 1.287815 CCGACAGAACCAGCGTACA 59.712 57.895 0.00 0.00 0.00 2.90
733 5096 0.687354 AAAGTCACATCACGGGCTCT 59.313 50.000 0.00 0.00 0.00 4.09
798 5194 0.875059 GTTCAAGGCTTTCCAGTCCG 59.125 55.000 0.00 0.00 33.74 4.79
839 5239 2.194212 TGGAGGACGATCGCTAGGC 61.194 63.158 16.60 0.84 0.00 3.93
891 5291 0.107831 TACTCCACTTGCTTGCCGTT 59.892 50.000 0.00 0.00 0.00 4.44
909 5309 4.714632 CCGTTCCCTTATATGGTTCATGT 58.285 43.478 4.10 0.00 0.00 3.21
910 5310 4.755123 CCGTTCCCTTATATGGTTCATGTC 59.245 45.833 4.10 0.00 0.00 3.06
911 5311 5.364778 CGTTCCCTTATATGGTTCATGTCA 58.635 41.667 4.10 0.00 0.00 3.58
912 5312 5.997746 CGTTCCCTTATATGGTTCATGTCAT 59.002 40.000 4.10 0.00 0.00 3.06
913 5313 6.073058 CGTTCCCTTATATGGTTCATGTCATG 60.073 42.308 6.47 6.47 0.00 3.07
931 5331 3.876914 TCATGCTTCGACCATGGTATTTC 59.123 43.478 19.80 4.02 40.29 2.17
967 5384 0.393808 CGACCACCATAACCCCCTTG 60.394 60.000 0.00 0.00 0.00 3.61
986 5409 1.630369 TGGGTACTGCTCTCTTTGCAT 59.370 47.619 0.00 0.00 39.86 3.96
1167 5605 2.247437 GGCGACGGGAAGATCATGC 61.247 63.158 0.00 0.00 0.00 4.06
1287 5730 2.649331 ACATCTCGTACAAGGAACGG 57.351 50.000 0.00 0.00 40.68 4.44
1355 5819 2.510238 CAGTAGCTGCCTGCCGAC 60.510 66.667 0.00 0.00 44.23 4.79
1383 5847 4.323477 TCCGTCAAACTGGGCCGG 62.323 66.667 11.83 11.83 39.98 6.13
1440 5913 2.583868 TATAACTGCACGGCGGCG 60.584 61.111 31.06 31.06 38.71 6.46
1629 6337 4.047059 TCGGGCGAGACGTTCACC 62.047 66.667 0.00 0.00 0.00 4.02
1859 6661 5.112220 TCGTTAGAAGCTCTCGTTAACAA 57.888 39.130 6.39 0.00 0.00 2.83
1860 6662 5.152097 TCGTTAGAAGCTCTCGTTAACAAG 58.848 41.667 6.39 0.00 0.00 3.16
1861 6663 4.916249 CGTTAGAAGCTCTCGTTAACAAGT 59.084 41.667 6.39 0.00 0.00 3.16
1862 6664 5.059465 CGTTAGAAGCTCTCGTTAACAAGTC 59.941 44.000 6.39 0.00 0.00 3.01
1863 6665 3.566523 AGAAGCTCTCGTTAACAAGTCG 58.433 45.455 6.39 0.00 0.00 4.18
1864 6666 3.252701 AGAAGCTCTCGTTAACAAGTCGA 59.747 43.478 6.39 0.00 0.00 4.20
1865 6667 3.637998 AGCTCTCGTTAACAAGTCGAA 57.362 42.857 6.39 0.00 33.32 3.71
1866 6668 3.306818 AGCTCTCGTTAACAAGTCGAAC 58.693 45.455 6.39 0.00 33.32 3.95
1867 6669 3.004524 AGCTCTCGTTAACAAGTCGAACT 59.995 43.478 6.39 0.00 33.32 3.01
1868 6670 3.119792 GCTCTCGTTAACAAGTCGAACTG 59.880 47.826 6.39 0.00 33.32 3.16
1869 6671 3.635331 TCTCGTTAACAAGTCGAACTGG 58.365 45.455 6.39 0.00 33.32 4.00
1870 6672 2.729882 CTCGTTAACAAGTCGAACTGGG 59.270 50.000 6.39 0.00 33.32 4.45
1871 6673 1.796459 CGTTAACAAGTCGAACTGGGG 59.204 52.381 6.39 0.00 0.00 4.96
1872 6674 2.804212 CGTTAACAAGTCGAACTGGGGT 60.804 50.000 6.39 0.00 0.00 4.95
1873 6675 2.536761 TAACAAGTCGAACTGGGGTG 57.463 50.000 0.00 0.00 0.00 4.61
1874 6676 0.544697 AACAAGTCGAACTGGGGTGT 59.455 50.000 0.00 0.00 0.00 4.16
1875 6677 0.179056 ACAAGTCGAACTGGGGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
1876 6678 0.884704 CAAGTCGAACTGGGGTGTGG 60.885 60.000 0.00 0.00 0.00 4.17
1877 6679 1.342672 AAGTCGAACTGGGGTGTGGT 61.343 55.000 0.00 0.00 0.00 4.16
1878 6680 0.470456 AGTCGAACTGGGGTGTGGTA 60.470 55.000 0.00 0.00 0.00 3.25
1879 6681 0.320160 GTCGAACTGGGGTGTGGTAC 60.320 60.000 0.00 0.00 0.00 3.34
1880 6682 0.759812 TCGAACTGGGGTGTGGTACA 60.760 55.000 0.00 0.00 0.00 2.90
1881 6683 0.320421 CGAACTGGGGTGTGGTACAG 60.320 60.000 0.00 0.00 41.80 2.74
1882 6684 1.053424 GAACTGGGGTGTGGTACAGA 58.947 55.000 0.00 0.00 41.80 3.41
1883 6685 1.418637 GAACTGGGGTGTGGTACAGAA 59.581 52.381 0.00 0.00 41.80 3.02
1884 6686 1.056660 ACTGGGGTGTGGTACAGAAG 58.943 55.000 0.00 0.00 41.80 2.85
1885 6687 1.348064 CTGGGGTGTGGTACAGAAGA 58.652 55.000 0.00 0.00 41.80 2.87
1886 6688 1.697432 CTGGGGTGTGGTACAGAAGAA 59.303 52.381 0.00 0.00 41.80 2.52
1887 6689 1.418637 TGGGGTGTGGTACAGAAGAAC 59.581 52.381 0.00 0.00 41.80 3.01
1888 6690 1.418637 GGGGTGTGGTACAGAAGAACA 59.581 52.381 0.00 0.00 41.80 3.18
1917 6719 0.629058 TAGGGCCAAGACCAATTCCC 59.371 55.000 6.18 0.00 29.21 3.97
1989 6791 2.139323 AGTCTGCACTACGGTCCATA 57.861 50.000 0.00 0.00 0.00 2.74
2021 6823 5.526846 CAGTGGCAAAAAGGCTTTATGAAAA 59.473 36.000 13.77 0.00 44.55 2.29
2065 6867 7.541916 TTTATTTTTCTGGGGTAATTTCGGT 57.458 32.000 0.00 0.00 0.00 4.69
2066 6868 8.647256 TTTATTTTTCTGGGGTAATTTCGGTA 57.353 30.769 0.00 0.00 0.00 4.02
2067 6869 8.647256 TTATTTTTCTGGGGTAATTTCGGTAA 57.353 30.769 0.00 0.00 0.00 2.85
2068 6870 7.727578 ATTTTTCTGGGGTAATTTCGGTAAT 57.272 32.000 0.00 0.00 0.00 1.89
2070 6872 7.628769 TTTTCTGGGGTAATTTCGGTAATAC 57.371 36.000 0.00 0.00 0.00 1.89
2071 6873 6.564557 TTCTGGGGTAATTTCGGTAATACT 57.435 37.500 0.00 0.00 0.00 2.12
2072 6874 6.165700 TCTGGGGTAATTTCGGTAATACTC 57.834 41.667 0.00 0.00 0.00 2.59
2073 6875 4.947645 TGGGGTAATTTCGGTAATACTCG 58.052 43.478 0.00 0.00 0.00 4.18
2074 6876 4.405358 TGGGGTAATTTCGGTAATACTCGT 59.595 41.667 0.00 0.00 0.00 4.18
2075 6877 5.104982 TGGGGTAATTTCGGTAATACTCGTT 60.105 40.000 0.00 0.00 0.00 3.85
2076 6878 6.097554 TGGGGTAATTTCGGTAATACTCGTTA 59.902 38.462 0.00 0.00 0.00 3.18
2078 6880 6.642540 GGGTAATTTCGGTAATACTCGTTAGG 59.357 42.308 0.00 0.00 0.00 2.69
2116 6956 2.030185 CGTTAGAGCGCCTATGTGGTAT 60.030 50.000 2.29 0.00 38.35 2.73
2127 6968 7.997223 AGCGCCTATGTGGTATACTTCTATATA 59.003 37.037 2.29 0.00 38.35 0.86
2128 6969 8.627403 GCGCCTATGTGGTATACTTCTATATAA 58.373 37.037 0.00 0.00 38.35 0.98
2216 7067 9.740239 AATATGTTGAATCTTGAATGTGTATGC 57.260 29.630 0.00 0.00 0.00 3.14
2220 7071 7.595875 TGTTGAATCTTGAATGTGTATGCAAAG 59.404 33.333 0.00 0.00 31.41 2.77
2228 7079 8.839947 TTGAATGTGTATGCAAAGATAATTCG 57.160 30.769 0.00 0.00 28.62 3.34
2234 7086 7.748683 TGTGTATGCAAAGATAATTCGTTTCAC 59.251 33.333 0.00 0.00 0.00 3.18
2255 7107 5.350365 TCACACGCAAGCCTACTTTTTATAG 59.650 40.000 0.00 0.00 45.62 1.31
2319 7171 8.826710 CGTCATAGCTATAAGAAAAATGGTCAA 58.173 33.333 5.77 0.00 0.00 3.18
2377 7229 9.612066 AACAAATATTCATGTTGACAAAAAGGT 57.388 25.926 4.99 0.00 38.29 3.50
2383 7235 6.951062 TCATGTTGACAAAAAGGTATCACA 57.049 33.333 0.00 0.00 0.00 3.58
2384 7236 7.340122 TCATGTTGACAAAAAGGTATCACAA 57.660 32.000 0.00 0.00 0.00 3.33
2385 7237 7.776107 TCATGTTGACAAAAAGGTATCACAAA 58.224 30.769 0.00 0.00 0.00 2.83
2386 7238 8.253810 TCATGTTGACAAAAAGGTATCACAAAA 58.746 29.630 0.00 0.00 0.00 2.44
2387 7239 8.542132 CATGTTGACAAAAAGGTATCACAAAAG 58.458 33.333 0.00 0.00 0.00 2.27
2388 7240 7.607250 TGTTGACAAAAAGGTATCACAAAAGT 58.393 30.769 0.00 0.00 0.00 2.66
2389 7241 8.740906 TGTTGACAAAAAGGTATCACAAAAGTA 58.259 29.630 0.00 0.00 0.00 2.24
2390 7242 9.744468 GTTGACAAAAAGGTATCACAAAAGTAT 57.256 29.630 0.00 0.00 0.00 2.12
2481 7333 7.460296 ACAAAACAAATCAAAAGTAAAAGGCG 58.540 30.769 0.00 0.00 0.00 5.52
2482 7334 7.332182 ACAAAACAAATCAAAAGTAAAAGGCGA 59.668 29.630 0.00 0.00 0.00 5.54
2483 7335 7.835634 AAACAAATCAAAAGTAAAAGGCGAA 57.164 28.000 0.00 0.00 0.00 4.70
2484 7336 7.835634 AACAAATCAAAAGTAAAAGGCGAAA 57.164 28.000 0.00 0.00 0.00 3.46
2485 7337 7.229228 ACAAATCAAAAGTAAAAGGCGAAAC 57.771 32.000 0.00 0.00 0.00 2.78
2486 7338 6.814146 ACAAATCAAAAGTAAAAGGCGAAACA 59.186 30.769 0.00 0.00 0.00 2.83
2487 7339 7.332182 ACAAATCAAAAGTAAAAGGCGAAACAA 59.668 29.630 0.00 0.00 0.00 2.83
2488 7340 7.835634 AATCAAAAGTAAAAGGCGAAACAAA 57.164 28.000 0.00 0.00 0.00 2.83
2489 7341 8.432110 AATCAAAAGTAAAAGGCGAAACAAAT 57.568 26.923 0.00 0.00 0.00 2.32
2490 7342 9.535878 AATCAAAAGTAAAAGGCGAAACAAATA 57.464 25.926 0.00 0.00 0.00 1.40
2491 7343 8.928270 TCAAAAGTAAAAGGCGAAACAAATAA 57.072 26.923 0.00 0.00 0.00 1.40
2492 7344 9.367444 TCAAAAGTAAAAGGCGAAACAAATAAA 57.633 25.926 0.00 0.00 0.00 1.40
2493 7345 9.974750 CAAAAGTAAAAGGCGAAACAAATAAAA 57.025 25.926 0.00 0.00 0.00 1.52
2496 7348 9.535878 AAGTAAAAGGCGAAACAAATAAAATGA 57.464 25.926 0.00 0.00 0.00 2.57
2497 7349 9.705290 AGTAAAAGGCGAAACAAATAAAATGAT 57.295 25.926 0.00 0.00 0.00 2.45
2500 7352 8.600449 AAAGGCGAAACAAATAAAATGATTCA 57.400 26.923 0.00 0.00 31.31 2.57
2501 7353 8.776376 AAGGCGAAACAAATAAAATGATTCAT 57.224 26.923 0.00 0.00 31.31 2.57
2502 7354 9.868277 AAGGCGAAACAAATAAAATGATTCATA 57.132 25.926 0.00 0.00 31.31 2.15
2555 7407 9.787532 ATATGAAAACAAAATCCATCGTAAGTG 57.212 29.630 0.00 0.00 39.48 3.16
2556 7408 7.265647 TGAAAACAAAATCCATCGTAAGTGA 57.734 32.000 0.00 0.00 39.48 3.41
2557 7409 7.881142 TGAAAACAAAATCCATCGTAAGTGAT 58.119 30.769 0.00 0.00 39.48 3.06
2558 7410 8.356657 TGAAAACAAAATCCATCGTAAGTGATT 58.643 29.630 0.00 0.00 39.48 2.57
2559 7411 9.191995 GAAAACAAAATCCATCGTAAGTGATTT 57.808 29.630 0.00 0.00 40.23 2.17
2560 7412 8.519492 AAACAAAATCCATCGTAAGTGATTTG 57.481 30.769 0.00 0.00 39.31 2.32
2561 7413 7.447374 ACAAAATCCATCGTAAGTGATTTGA 57.553 32.000 0.00 0.00 39.31 2.69
2562 7414 7.881142 ACAAAATCCATCGTAAGTGATTTGAA 58.119 30.769 0.00 0.00 39.31 2.69
2563 7415 8.522830 ACAAAATCCATCGTAAGTGATTTGAAT 58.477 29.630 0.00 0.00 39.31 2.57
2564 7416 9.013490 CAAAATCCATCGTAAGTGATTTGAATC 57.987 33.333 0.00 0.00 39.31 2.52
2565 7417 7.864108 AATCCATCGTAAGTGATTTGAATCA 57.136 32.000 2.39 2.39 42.78 2.57
2566 7418 7.864108 ATCCATCGTAAGTGATTTGAATCAA 57.136 32.000 7.91 0.00 46.13 2.57
2567 7419 7.680442 TCCATCGTAAGTGATTTGAATCAAA 57.320 32.000 11.10 11.10 46.13 2.69
2568 7420 8.105097 TCCATCGTAAGTGATTTGAATCAAAA 57.895 30.769 12.75 0.00 46.13 2.44
2569 7421 8.572185 TCCATCGTAAGTGATTTGAATCAAAAA 58.428 29.630 12.75 1.60 46.13 1.94
2570 7422 8.853345 CCATCGTAAGTGATTTGAATCAAAAAG 58.147 33.333 12.75 0.00 46.13 2.27
2571 7423 9.611284 CATCGTAAGTGATTTGAATCAAAAAGA 57.389 29.630 12.75 3.56 46.13 2.52
2572 7424 9.612620 ATCGTAAGTGATTTGAATCAAAAAGAC 57.387 29.630 12.75 9.24 46.13 3.01
2573 7425 8.073768 TCGTAAGTGATTTGAATCAAAAAGACC 58.926 33.333 12.75 0.20 46.13 3.85
2574 7426 7.326063 CGTAAGTGATTTGAATCAAAAAGACCC 59.674 37.037 12.75 0.00 46.13 4.46
2575 7427 6.983906 AGTGATTTGAATCAAAAAGACCCT 57.016 33.333 12.75 0.00 46.13 4.34
2576 7428 8.477419 AAGTGATTTGAATCAAAAAGACCCTA 57.523 30.769 12.75 0.00 46.13 3.53
2577 7429 7.886338 AGTGATTTGAATCAAAAAGACCCTAC 58.114 34.615 12.75 3.92 46.13 3.18
2578 7430 6.801862 GTGATTTGAATCAAAAAGACCCTACG 59.198 38.462 12.75 0.00 46.13 3.51
2579 7431 6.712998 TGATTTGAATCAAAAAGACCCTACGA 59.287 34.615 12.75 0.00 42.11 3.43
2580 7432 7.393234 TGATTTGAATCAAAAAGACCCTACGAT 59.607 33.333 12.75 0.00 42.11 3.73
2581 7433 6.494893 TTGAATCAAAAAGACCCTACGATG 57.505 37.500 0.00 0.00 0.00 3.84
2582 7434 5.556915 TGAATCAAAAAGACCCTACGATGT 58.443 37.500 0.00 0.00 0.00 3.06
2583 7435 6.001460 TGAATCAAAAAGACCCTACGATGTT 58.999 36.000 0.00 0.00 0.00 2.71
2584 7436 6.488683 TGAATCAAAAAGACCCTACGATGTTT 59.511 34.615 0.00 0.00 0.00 2.83
2585 7437 6.894339 ATCAAAAAGACCCTACGATGTTTT 57.106 33.333 0.00 0.00 0.00 2.43
2586 7438 6.308371 TCAAAAAGACCCTACGATGTTTTC 57.692 37.500 0.00 0.00 0.00 2.29
2617 7469 4.715527 AAAATTGCATCTCAGCTCTTCC 57.284 40.909 0.00 0.00 34.99 3.46
2618 7470 3.361281 AATTGCATCTCAGCTCTTCCA 57.639 42.857 0.00 0.00 34.99 3.53
2619 7471 2.865119 TTGCATCTCAGCTCTTCCAA 57.135 45.000 0.00 0.00 34.99 3.53
2620 7472 2.865119 TGCATCTCAGCTCTTCCAAA 57.135 45.000 0.00 0.00 34.99 3.28
2621 7473 3.361281 TGCATCTCAGCTCTTCCAAAT 57.639 42.857 0.00 0.00 34.99 2.32
2622 7474 3.276857 TGCATCTCAGCTCTTCCAAATC 58.723 45.455 0.00 0.00 34.99 2.17
2623 7475 3.054582 TGCATCTCAGCTCTTCCAAATCT 60.055 43.478 0.00 0.00 34.99 2.40
2624 7476 3.560896 GCATCTCAGCTCTTCCAAATCTC 59.439 47.826 0.00 0.00 0.00 2.75
2625 7477 4.767478 CATCTCAGCTCTTCCAAATCTCA 58.233 43.478 0.00 0.00 0.00 3.27
2626 7478 4.897509 TCTCAGCTCTTCCAAATCTCAA 57.102 40.909 0.00 0.00 0.00 3.02
2627 7479 5.432680 TCTCAGCTCTTCCAAATCTCAAT 57.567 39.130 0.00 0.00 0.00 2.57
2628 7480 6.550938 TCTCAGCTCTTCCAAATCTCAATA 57.449 37.500 0.00 0.00 0.00 1.90
2629 7481 7.134362 TCTCAGCTCTTCCAAATCTCAATAT 57.866 36.000 0.00 0.00 0.00 1.28
2630 7482 7.571919 TCTCAGCTCTTCCAAATCTCAATATT 58.428 34.615 0.00 0.00 0.00 1.28
2631 7483 8.051535 TCTCAGCTCTTCCAAATCTCAATATTT 58.948 33.333 0.00 0.00 0.00 1.40
2632 7484 8.218338 TCAGCTCTTCCAAATCTCAATATTTC 57.782 34.615 0.00 0.00 0.00 2.17
2633 7485 8.051535 TCAGCTCTTCCAAATCTCAATATTTCT 58.948 33.333 0.00 0.00 0.00 2.52
2634 7486 8.684520 CAGCTCTTCCAAATCTCAATATTTCTT 58.315 33.333 0.00 0.00 0.00 2.52
2635 7487 8.684520 AGCTCTTCCAAATCTCAATATTTCTTG 58.315 33.333 0.00 0.00 0.00 3.02
2636 7488 7.434602 GCTCTTCCAAATCTCAATATTTCTTGC 59.565 37.037 0.00 0.00 0.00 4.01
2637 7489 8.585471 TCTTCCAAATCTCAATATTTCTTGCT 57.415 30.769 0.00 0.00 0.00 3.91
2638 7490 9.685276 TCTTCCAAATCTCAATATTTCTTGCTA 57.315 29.630 0.00 0.00 0.00 3.49
2639 7491 9.947669 CTTCCAAATCTCAATATTTCTTGCTAG 57.052 33.333 0.00 0.00 0.00 3.42
2640 7492 8.455903 TCCAAATCTCAATATTTCTTGCTAGG 57.544 34.615 0.00 0.00 0.00 3.02
2641 7493 8.055181 TCCAAATCTCAATATTTCTTGCTAGGT 58.945 33.333 0.00 0.00 0.00 3.08
2642 7494 8.133627 CCAAATCTCAATATTTCTTGCTAGGTG 58.866 37.037 0.00 0.00 0.00 4.00
2643 7495 6.874288 ATCTCAATATTTCTTGCTAGGTGC 57.126 37.500 0.00 0.00 43.25 5.01
2644 7496 5.126067 TCTCAATATTTCTTGCTAGGTGCC 58.874 41.667 0.00 0.00 42.00 5.01
2645 7497 4.854173 TCAATATTTCTTGCTAGGTGCCA 58.146 39.130 0.00 0.00 42.00 4.92
2646 7498 4.640201 TCAATATTTCTTGCTAGGTGCCAC 59.360 41.667 0.00 0.00 42.00 5.01
2647 7499 2.887151 ATTTCTTGCTAGGTGCCACT 57.113 45.000 0.00 0.00 42.00 4.00
2648 7500 1.896220 TTTCTTGCTAGGTGCCACTG 58.104 50.000 0.00 0.00 42.00 3.66
2649 7501 0.764890 TTCTTGCTAGGTGCCACTGT 59.235 50.000 0.00 0.00 42.00 3.55
2650 7502 0.764890 TCTTGCTAGGTGCCACTGTT 59.235 50.000 0.00 0.00 42.00 3.16
2651 7503 1.142870 TCTTGCTAGGTGCCACTGTTT 59.857 47.619 0.00 0.00 42.00 2.83
2652 7504 1.267806 CTTGCTAGGTGCCACTGTTTG 59.732 52.381 0.00 0.00 42.00 2.93
2653 7505 0.472044 TGCTAGGTGCCACTGTTTGA 59.528 50.000 0.00 0.00 42.00 2.69
2654 7506 1.073763 TGCTAGGTGCCACTGTTTGAT 59.926 47.619 0.00 0.00 42.00 2.57
2655 7507 1.470098 GCTAGGTGCCACTGTTTGATG 59.530 52.381 0.00 0.00 35.15 3.07
2656 7508 2.875672 GCTAGGTGCCACTGTTTGATGA 60.876 50.000 0.00 0.00 35.15 2.92
2657 7509 2.363306 AGGTGCCACTGTTTGATGAA 57.637 45.000 0.00 0.00 0.00 2.57
2658 7510 2.880443 AGGTGCCACTGTTTGATGAAT 58.120 42.857 0.00 0.00 0.00 2.57
2659 7511 2.559668 AGGTGCCACTGTTTGATGAATG 59.440 45.455 0.00 0.00 0.00 2.67
2660 7512 2.557924 GGTGCCACTGTTTGATGAATGA 59.442 45.455 0.00 0.00 0.00 2.57
2661 7513 3.194116 GGTGCCACTGTTTGATGAATGAT 59.806 43.478 0.00 0.00 0.00 2.45
2662 7514 4.398988 GGTGCCACTGTTTGATGAATGATA 59.601 41.667 0.00 0.00 0.00 2.15
2663 7515 5.449588 GGTGCCACTGTTTGATGAATGATAG 60.450 44.000 0.00 0.00 0.00 2.08
2664 7516 5.124457 GTGCCACTGTTTGATGAATGATAGT 59.876 40.000 0.00 0.00 0.00 2.12
2665 7517 5.124297 TGCCACTGTTTGATGAATGATAGTG 59.876 40.000 0.00 0.00 35.34 2.74
2666 7518 5.575957 CCACTGTTTGATGAATGATAGTGC 58.424 41.667 0.00 0.00 34.51 4.40
2667 7519 5.356190 CCACTGTTTGATGAATGATAGTGCT 59.644 40.000 0.00 0.00 34.51 4.40
2668 7520 6.127814 CCACTGTTTGATGAATGATAGTGCTT 60.128 38.462 0.00 0.00 34.51 3.91
2669 7521 6.965500 CACTGTTTGATGAATGATAGTGCTTC 59.035 38.462 0.00 0.00 0.00 3.86
2670 7522 6.094603 ACTGTTTGATGAATGATAGTGCTTCC 59.905 38.462 0.00 0.00 0.00 3.46
2671 7523 5.357878 TGTTTGATGAATGATAGTGCTTCCC 59.642 40.000 0.00 0.00 0.00 3.97
2672 7524 4.090761 TGATGAATGATAGTGCTTCCCC 57.909 45.455 0.00 0.00 0.00 4.81
2673 7525 3.181440 TGATGAATGATAGTGCTTCCCCC 60.181 47.826 0.00 0.00 0.00 5.40
2674 7526 2.492025 TGAATGATAGTGCTTCCCCCT 58.508 47.619 0.00 0.00 0.00 4.79
2675 7527 2.852449 TGAATGATAGTGCTTCCCCCTT 59.148 45.455 0.00 0.00 0.00 3.95
2676 7528 3.269381 TGAATGATAGTGCTTCCCCCTTT 59.731 43.478 0.00 0.00 0.00 3.11
2677 7529 3.584733 ATGATAGTGCTTCCCCCTTTC 57.415 47.619 0.00 0.00 0.00 2.62
2678 7530 2.274542 TGATAGTGCTTCCCCCTTTCA 58.725 47.619 0.00 0.00 0.00 2.69
2679 7531 2.647299 TGATAGTGCTTCCCCCTTTCAA 59.353 45.455 0.00 0.00 0.00 2.69
2680 7532 3.075283 TGATAGTGCTTCCCCCTTTCAAA 59.925 43.478 0.00 0.00 0.00 2.69
2681 7533 1.704641 AGTGCTTCCCCCTTTCAAAC 58.295 50.000 0.00 0.00 0.00 2.93
2682 7534 1.063266 AGTGCTTCCCCCTTTCAAACA 60.063 47.619 0.00 0.00 0.00 2.83
2683 7535 1.970640 GTGCTTCCCCCTTTCAAACAT 59.029 47.619 0.00 0.00 0.00 2.71
2684 7536 3.161866 GTGCTTCCCCCTTTCAAACATA 58.838 45.455 0.00 0.00 0.00 2.29
2685 7537 3.576550 GTGCTTCCCCCTTTCAAACATAA 59.423 43.478 0.00 0.00 0.00 1.90
2686 7538 4.039852 GTGCTTCCCCCTTTCAAACATAAA 59.960 41.667 0.00 0.00 0.00 1.40
2687 7539 4.843516 TGCTTCCCCCTTTCAAACATAAAT 59.156 37.500 0.00 0.00 0.00 1.40
2688 7540 6.019748 TGCTTCCCCCTTTCAAACATAAATA 58.980 36.000 0.00 0.00 0.00 1.40
2689 7541 6.671779 TGCTTCCCCCTTTCAAACATAAATAT 59.328 34.615 0.00 0.00 0.00 1.28
2690 7542 6.986231 GCTTCCCCCTTTCAAACATAAATATG 59.014 38.462 0.00 0.00 39.55 1.78
2691 7543 7.430760 TTCCCCCTTTCAAACATAAATATGG 57.569 36.000 5.48 0.00 38.00 2.74
2692 7544 6.746894 TCCCCCTTTCAAACATAAATATGGA 58.253 36.000 5.48 0.00 38.00 3.41
2693 7545 7.192628 TCCCCCTTTCAAACATAAATATGGAA 58.807 34.615 5.48 0.00 38.00 3.53
2694 7546 7.680310 TCCCCCTTTCAAACATAAATATGGAAA 59.320 33.333 5.48 4.86 38.00 3.13
2695 7547 7.768582 CCCCCTTTCAAACATAAATATGGAAAC 59.231 37.037 5.48 0.00 38.00 2.78
2696 7548 7.768582 CCCCTTTCAAACATAAATATGGAAACC 59.231 37.037 5.48 0.00 38.00 3.27
2697 7549 7.491048 CCCTTTCAAACATAAATATGGAAACCG 59.509 37.037 5.48 0.00 38.00 4.44
2698 7550 8.247562 CCTTTCAAACATAAATATGGAAACCGA 58.752 33.333 5.48 0.00 38.00 4.69
2699 7551 9.801873 CTTTCAAACATAAATATGGAAACCGAT 57.198 29.630 5.48 0.00 38.00 4.18
2706 7558 9.621629 ACATAAATATGGAAACCGATTTAGACA 57.378 29.630 5.48 0.00 38.00 3.41
2712 7564 9.847224 ATATGGAAACCGATTTAGACATTTAGT 57.153 29.630 0.00 0.00 0.00 2.24
2714 7566 8.483307 TGGAAACCGATTTAGACATTTAGTAC 57.517 34.615 0.00 0.00 0.00 2.73
2715 7567 8.316214 TGGAAACCGATTTAGACATTTAGTACT 58.684 33.333 0.00 0.00 0.00 2.73
2716 7568 9.159364 GGAAACCGATTTAGACATTTAGTACTT 57.841 33.333 0.00 0.00 0.00 2.24
2755 7607 7.924103 AATTTTACAATTTGACGTGAAGGTC 57.076 32.000 2.79 0.00 37.45 3.85
2756 7608 6.438259 TTTTACAATTTGACGTGAAGGTCA 57.562 33.333 2.79 1.85 44.74 4.02
2789 7641 9.657419 AAAAACAAGACAATGACATCTTCTTTT 57.343 25.926 8.21 4.08 35.71 2.27
2790 7642 8.862550 AAACAAGACAATGACATCTTCTTTTC 57.137 30.769 8.21 0.00 32.77 2.29
2791 7643 7.572523 ACAAGACAATGACATCTTCTTTTCA 57.427 32.000 8.21 0.00 32.77 2.69
2792 7644 7.999679 ACAAGACAATGACATCTTCTTTTCAA 58.000 30.769 8.21 0.00 32.77 2.69
2793 7645 8.133627 ACAAGACAATGACATCTTCTTTTCAAG 58.866 33.333 8.21 2.23 32.77 3.02
2794 7646 7.814264 AGACAATGACATCTTCTTTTCAAGT 57.186 32.000 0.00 0.00 0.00 3.16
2795 7647 8.230472 AGACAATGACATCTTCTTTTCAAGTT 57.770 30.769 0.00 0.00 0.00 2.66
2796 7648 8.348507 AGACAATGACATCTTCTTTTCAAGTTC 58.651 33.333 0.00 0.00 0.00 3.01
2797 7649 7.999679 ACAATGACATCTTCTTTTCAAGTTCA 58.000 30.769 0.00 0.00 0.00 3.18
2798 7650 8.469200 ACAATGACATCTTCTTTTCAAGTTCAA 58.531 29.630 0.00 0.00 0.00 2.69
2799 7651 9.304731 CAATGACATCTTCTTTTCAAGTTCAAA 57.695 29.630 0.00 0.00 0.00 2.69
2800 7652 8.862550 ATGACATCTTCTTTTCAAGTTCAAAC 57.137 30.769 0.00 0.00 0.00 2.93
2801 7653 7.257722 TGACATCTTCTTTTCAAGTTCAAACC 58.742 34.615 0.00 0.00 0.00 3.27
2802 7654 7.093988 TGACATCTTCTTTTCAAGTTCAAACCA 60.094 33.333 0.00 0.00 0.00 3.67
2803 7655 7.035612 ACATCTTCTTTTCAAGTTCAAACCAC 58.964 34.615 0.00 0.00 0.00 4.16
2804 7656 5.636837 TCTTCTTTTCAAGTTCAAACCACG 58.363 37.500 0.00 0.00 0.00 4.94
2805 7657 4.364415 TCTTTTCAAGTTCAAACCACGG 57.636 40.909 0.00 0.00 0.00 4.94
2806 7658 3.129638 TCTTTTCAAGTTCAAACCACGGG 59.870 43.478 0.00 0.00 0.00 5.28
2807 7659 2.421751 TTCAAGTTCAAACCACGGGA 57.578 45.000 0.00 0.00 0.00 5.14
2808 7660 2.649531 TCAAGTTCAAACCACGGGAT 57.350 45.000 0.00 0.00 0.00 3.85
2809 7661 2.500229 TCAAGTTCAAACCACGGGATC 58.500 47.619 0.00 0.00 0.00 3.36
2810 7662 1.539827 CAAGTTCAAACCACGGGATCC 59.460 52.381 1.92 1.92 0.00 3.36
2811 7663 0.768622 AGTTCAAACCACGGGATCCA 59.231 50.000 15.23 0.00 0.00 3.41
2812 7664 0.879090 GTTCAAACCACGGGATCCAC 59.121 55.000 15.23 1.85 0.00 4.02
2813 7665 0.474614 TTCAAACCACGGGATCCACA 59.525 50.000 15.23 0.00 0.00 4.17
2814 7666 0.036164 TCAAACCACGGGATCCACAG 59.964 55.000 15.23 6.83 0.00 3.66
2815 7667 0.036164 CAAACCACGGGATCCACAGA 59.964 55.000 15.23 0.00 0.00 3.41
2816 7668 0.768622 AAACCACGGGATCCACAGAA 59.231 50.000 15.23 0.00 0.00 3.02
2817 7669 0.768622 AACCACGGGATCCACAGAAA 59.231 50.000 15.23 0.00 0.00 2.52
2818 7670 0.036306 ACCACGGGATCCACAGAAAC 59.964 55.000 15.23 0.00 0.00 2.78
2819 7671 1.019278 CCACGGGATCCACAGAAACG 61.019 60.000 15.23 8.44 0.00 3.60
2820 7672 1.019278 CACGGGATCCACAGAAACGG 61.019 60.000 15.23 0.00 0.00 4.44
2821 7673 1.449601 CGGGATCCACAGAAACGGG 60.450 63.158 15.23 0.00 0.00 5.28
2822 7674 1.077716 GGGATCCACAGAAACGGGG 60.078 63.158 15.23 0.00 0.00 5.73
2823 7675 1.683441 GGATCCACAGAAACGGGGT 59.317 57.895 6.95 0.00 0.00 4.95
2824 7676 0.392595 GGATCCACAGAAACGGGGTC 60.393 60.000 6.95 0.00 0.00 4.46
2825 7677 0.392595 GATCCACAGAAACGGGGTCC 60.393 60.000 0.00 0.00 0.00 4.46
2826 7678 0.840722 ATCCACAGAAACGGGGTCCT 60.841 55.000 0.00 0.00 0.00 3.85
2827 7679 1.057851 TCCACAGAAACGGGGTCCTT 61.058 55.000 0.00 0.00 0.00 3.36
2828 7680 0.605589 CCACAGAAACGGGGTCCTTC 60.606 60.000 0.00 0.00 0.00 3.46
2829 7681 0.107831 CACAGAAACGGGGTCCTTCA 59.892 55.000 0.00 0.00 0.00 3.02
2830 7682 0.841289 ACAGAAACGGGGTCCTTCAA 59.159 50.000 0.00 0.00 0.00 2.69
2831 7683 1.235724 CAGAAACGGGGTCCTTCAAC 58.764 55.000 0.00 0.00 0.00 3.18
2832 7684 1.137697 AGAAACGGGGTCCTTCAACT 58.862 50.000 0.00 0.00 0.00 3.16
2833 7685 1.071857 AGAAACGGGGTCCTTCAACTC 59.928 52.381 0.00 0.00 0.00 3.01
2834 7686 0.250166 AAACGGGGTCCTTCAACTCG 60.250 55.000 0.00 0.00 0.00 4.18
2835 7687 1.117142 AACGGGGTCCTTCAACTCGA 61.117 55.000 0.00 0.00 0.00 4.04
2836 7688 1.117142 ACGGGGTCCTTCAACTCGAA 61.117 55.000 0.00 0.00 0.00 3.71
2837 7689 0.669625 CGGGGTCCTTCAACTCGAAC 60.670 60.000 0.00 0.00 0.00 3.95
2838 7690 0.395312 GGGGTCCTTCAACTCGAACA 59.605 55.000 0.00 0.00 0.00 3.18
2839 7691 1.202722 GGGGTCCTTCAACTCGAACAA 60.203 52.381 0.00 0.00 0.00 2.83
2840 7692 1.871676 GGGTCCTTCAACTCGAACAAC 59.128 52.381 0.00 0.00 0.00 3.32
2841 7693 1.871676 GGTCCTTCAACTCGAACAACC 59.128 52.381 0.00 0.00 0.00 3.77
2842 7694 1.525619 GTCCTTCAACTCGAACAACCG 59.474 52.381 0.00 0.00 0.00 4.44
2843 7695 1.409790 TCCTTCAACTCGAACAACCGA 59.590 47.619 0.00 0.00 37.03 4.69
2844 7696 2.036733 TCCTTCAACTCGAACAACCGAT 59.963 45.455 0.00 0.00 37.96 4.18
2845 7697 3.256383 TCCTTCAACTCGAACAACCGATA 59.744 43.478 0.00 0.00 37.96 2.92
2846 7698 3.991773 CCTTCAACTCGAACAACCGATAA 59.008 43.478 0.00 0.00 37.96 1.75
2847 7699 4.630069 CCTTCAACTCGAACAACCGATAAT 59.370 41.667 0.00 0.00 37.96 1.28
2848 7700 5.808540 CCTTCAACTCGAACAACCGATAATA 59.191 40.000 0.00 0.00 37.96 0.98
2849 7701 6.479001 CCTTCAACTCGAACAACCGATAATAT 59.521 38.462 0.00 0.00 37.96 1.28
2850 7702 7.306632 CCTTCAACTCGAACAACCGATAATATC 60.307 40.741 0.00 0.00 37.96 1.63
2851 7703 6.566141 TCAACTCGAACAACCGATAATATCA 58.434 36.000 0.87 0.00 37.96 2.15
2852 7704 6.474427 TCAACTCGAACAACCGATAATATCAC 59.526 38.462 0.87 0.00 37.96 3.06
2853 7705 6.145338 ACTCGAACAACCGATAATATCACT 57.855 37.500 0.87 0.00 37.96 3.41
2854 7706 6.207213 ACTCGAACAACCGATAATATCACTC 58.793 40.000 0.87 0.00 37.96 3.51
2855 7707 5.209977 TCGAACAACCGATAATATCACTCG 58.790 41.667 0.87 0.18 33.14 4.18
2856 7708 4.974275 CGAACAACCGATAATATCACTCGT 59.026 41.667 0.87 0.00 0.00 4.18
2857 7709 6.018016 TCGAACAACCGATAATATCACTCGTA 60.018 38.462 0.87 0.00 33.14 3.43
2858 7710 6.800408 CGAACAACCGATAATATCACTCGTAT 59.200 38.462 0.87 0.00 0.00 3.06
2859 7711 7.325338 CGAACAACCGATAATATCACTCGTATT 59.675 37.037 0.87 0.00 0.00 1.89
2860 7712 9.616634 GAACAACCGATAATATCACTCGTATTA 57.383 33.333 0.87 0.00 0.00 0.98
2861 7713 8.961294 ACAACCGATAATATCACTCGTATTAC 57.039 34.615 0.87 0.00 29.54 1.89
2862 7714 8.570488 ACAACCGATAATATCACTCGTATTACA 58.430 33.333 0.87 0.00 29.54 2.41
2863 7715 9.062674 CAACCGATAATATCACTCGTATTACAG 57.937 37.037 0.87 0.00 29.54 2.74
2864 7716 7.249147 ACCGATAATATCACTCGTATTACAGC 58.751 38.462 0.87 0.00 29.54 4.40
2865 7717 6.691818 CCGATAATATCACTCGTATTACAGCC 59.308 42.308 0.87 0.00 29.54 4.85
2866 7718 7.415318 CCGATAATATCACTCGTATTACAGCCT 60.415 40.741 0.87 0.00 29.54 4.58
2867 7719 8.610035 CGATAATATCACTCGTATTACAGCCTA 58.390 37.037 0.87 0.00 29.54 3.93
2870 7722 7.762588 ATATCACTCGTATTACAGCCTAACT 57.237 36.000 0.00 0.00 0.00 2.24
2871 7723 5.496133 TCACTCGTATTACAGCCTAACTC 57.504 43.478 0.00 0.00 0.00 3.01
2872 7724 4.945543 TCACTCGTATTACAGCCTAACTCA 59.054 41.667 0.00 0.00 0.00 3.41
2873 7725 5.416639 TCACTCGTATTACAGCCTAACTCAA 59.583 40.000 0.00 0.00 0.00 3.02
2874 7726 5.744345 CACTCGTATTACAGCCTAACTCAAG 59.256 44.000 0.00 0.00 0.00 3.02
2875 7727 4.679662 TCGTATTACAGCCTAACTCAAGC 58.320 43.478 0.00 0.00 0.00 4.01
2876 7728 3.802685 CGTATTACAGCCTAACTCAAGCC 59.197 47.826 0.00 0.00 0.00 4.35
2877 7729 2.781681 TTACAGCCTAACTCAAGCCC 57.218 50.000 0.00 0.00 0.00 5.19
2878 7730 1.651737 TACAGCCTAACTCAAGCCCA 58.348 50.000 0.00 0.00 0.00 5.36
2879 7731 0.326264 ACAGCCTAACTCAAGCCCAG 59.674 55.000 0.00 0.00 0.00 4.45
2880 7732 0.326264 CAGCCTAACTCAAGCCCAGT 59.674 55.000 0.00 0.00 0.00 4.00
2881 7733 0.615850 AGCCTAACTCAAGCCCAGTC 59.384 55.000 0.00 0.00 0.00 3.51
2882 7734 0.324943 GCCTAACTCAAGCCCAGTCA 59.675 55.000 0.00 0.00 0.00 3.41
2883 7735 1.065126 GCCTAACTCAAGCCCAGTCAT 60.065 52.381 0.00 0.00 0.00 3.06
2884 7736 2.170607 GCCTAACTCAAGCCCAGTCATA 59.829 50.000 0.00 0.00 0.00 2.15
2885 7737 3.181450 GCCTAACTCAAGCCCAGTCATAT 60.181 47.826 0.00 0.00 0.00 1.78
2886 7738 4.687219 GCCTAACTCAAGCCCAGTCATATT 60.687 45.833 0.00 0.00 0.00 1.28
2887 7739 4.818546 CCTAACTCAAGCCCAGTCATATTG 59.181 45.833 0.00 0.00 0.00 1.90
2888 7740 4.574674 AACTCAAGCCCAGTCATATTGA 57.425 40.909 0.00 0.00 0.00 2.57
2889 7741 4.785346 ACTCAAGCCCAGTCATATTGAT 57.215 40.909 0.00 0.00 30.13 2.57
2890 7742 5.121380 ACTCAAGCCCAGTCATATTGATT 57.879 39.130 0.00 0.00 30.13 2.57
2891 7743 6.252599 ACTCAAGCCCAGTCATATTGATTA 57.747 37.500 0.00 0.00 30.13 1.75
2892 7744 6.845908 ACTCAAGCCCAGTCATATTGATTAT 58.154 36.000 0.00 0.00 30.13 1.28
2893 7745 7.293073 ACTCAAGCCCAGTCATATTGATTATT 58.707 34.615 0.00 0.00 30.13 1.40
2894 7746 7.230108 ACTCAAGCCCAGTCATATTGATTATTG 59.770 37.037 0.00 0.00 30.13 1.90
2895 7747 6.491062 TCAAGCCCAGTCATATTGATTATTGG 59.509 38.462 0.00 0.00 0.00 3.16
2896 7748 5.957132 AGCCCAGTCATATTGATTATTGGT 58.043 37.500 0.00 0.00 0.00 3.67
2897 7749 7.090319 AGCCCAGTCATATTGATTATTGGTA 57.910 36.000 0.00 0.00 0.00 3.25
2898 7750 7.526041 AGCCCAGTCATATTGATTATTGGTAA 58.474 34.615 0.00 0.00 0.00 2.85
2899 7751 8.172741 AGCCCAGTCATATTGATTATTGGTAAT 58.827 33.333 0.00 0.00 33.26 1.89
2900 7752 9.461312 GCCCAGTCATATTGATTATTGGTAATA 57.539 33.333 0.00 0.00 30.75 0.98
2911 7763 8.039603 TGATTATTGGTAATAATGATCACCGC 57.960 34.615 10.56 0.00 42.53 5.68
2912 7764 6.474819 TTATTGGTAATAATGATCACCGCG 57.525 37.500 0.00 0.00 33.55 6.46
2913 7765 2.761559 TGGTAATAATGATCACCGCGG 58.238 47.619 26.86 26.86 33.55 6.46
2914 7766 1.463444 GGTAATAATGATCACCGCGGC 59.537 52.381 28.58 9.70 0.00 6.53
2915 7767 2.413837 GTAATAATGATCACCGCGGCT 58.586 47.619 28.58 10.68 0.00 5.52
2916 7768 1.229428 AATAATGATCACCGCGGCTG 58.771 50.000 28.58 22.22 0.00 4.85
2917 7769 0.603707 ATAATGATCACCGCGGCTGG 60.604 55.000 28.58 15.91 0.00 4.85
2918 7770 1.966901 TAATGATCACCGCGGCTGGT 61.967 55.000 28.58 19.26 45.21 4.00
2919 7771 2.819984 AATGATCACCGCGGCTGGTT 62.820 55.000 28.58 10.35 41.38 3.67
2920 7772 3.499737 GATCACCGCGGCTGGTTG 61.500 66.667 28.58 16.39 41.38 3.77
2924 7776 4.344865 ACCGCGGCTGGTTGGAAT 62.345 61.111 28.58 0.00 39.99 3.01
2925 7777 2.124901 CCGCGGCTGGTTGGAATA 60.125 61.111 14.67 0.00 0.00 1.75
2926 7778 1.525995 CCGCGGCTGGTTGGAATAT 60.526 57.895 14.67 0.00 0.00 1.28
2927 7779 0.250124 CCGCGGCTGGTTGGAATATA 60.250 55.000 14.67 0.00 0.00 0.86
2928 7780 1.148310 CGCGGCTGGTTGGAATATAG 58.852 55.000 0.00 0.00 0.00 1.31
2929 7781 1.523758 GCGGCTGGTTGGAATATAGG 58.476 55.000 0.00 0.00 0.00 2.57
2930 7782 1.071699 GCGGCTGGTTGGAATATAGGA 59.928 52.381 0.00 0.00 0.00 2.94
2931 7783 2.290323 GCGGCTGGTTGGAATATAGGAT 60.290 50.000 0.00 0.00 0.00 3.24
2932 7784 3.810743 GCGGCTGGTTGGAATATAGGATT 60.811 47.826 0.00 0.00 0.00 3.01
2933 7785 3.753272 CGGCTGGTTGGAATATAGGATTG 59.247 47.826 0.00 0.00 0.00 2.67
2934 7786 4.504864 CGGCTGGTTGGAATATAGGATTGA 60.505 45.833 0.00 0.00 0.00 2.57
2935 7787 5.385198 GGCTGGTTGGAATATAGGATTGAA 58.615 41.667 0.00 0.00 0.00 2.69
2936 7788 5.833131 GGCTGGTTGGAATATAGGATTGAAA 59.167 40.000 0.00 0.00 0.00 2.69
2937 7789 6.323739 GGCTGGTTGGAATATAGGATTGAAAA 59.676 38.462 0.00 0.00 0.00 2.29
2938 7790 7.147742 GGCTGGTTGGAATATAGGATTGAAAAA 60.148 37.037 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
184 4484 1.104577 TTGCACGGTTGGGGTTTCTC 61.105 55.000 0.00 0.00 0.00 2.87
226 4526 2.614734 GCCTGGGCTTACGAAAACTAGT 60.615 50.000 4.12 0.00 38.26 2.57
236 4536 1.405463 GCTGTATTTGCCTGGGCTTAC 59.595 52.381 13.05 11.57 42.51 2.34
239 4539 0.251742 TTGCTGTATTTGCCTGGGCT 60.252 50.000 13.05 0.00 42.51 5.19
240 4540 0.108662 GTTGCTGTATTTGCCTGGGC 60.109 55.000 4.43 4.43 42.35 5.36
241 4541 0.532115 GGTTGCTGTATTTGCCTGGG 59.468 55.000 0.00 0.00 0.00 4.45
242 4542 0.532115 GGGTTGCTGTATTTGCCTGG 59.468 55.000 0.00 0.00 0.00 4.45
243 4543 0.171007 CGGGTTGCTGTATTTGCCTG 59.829 55.000 0.00 0.00 0.00 4.85
262 4562 5.163509 TGGATATAAGTATGAGCGAGGATGC 60.164 44.000 0.00 0.00 0.00 3.91
301 4603 6.806249 TCAATGCAACGATCCTCAAATAAAAC 59.194 34.615 0.00 0.00 0.00 2.43
303 4605 6.507958 TCAATGCAACGATCCTCAAATAAA 57.492 33.333 0.00 0.00 0.00 1.40
322 4624 4.215613 GTCGCTTTCCCAACTACTTTCAAT 59.784 41.667 0.00 0.00 0.00 2.57
329 4631 1.804748 CAAGGTCGCTTTCCCAACTAC 59.195 52.381 0.00 0.00 0.00 2.73
411 4715 8.630278 CTTAAAAGCATCAAATCCATCTTCAG 57.370 34.615 0.00 0.00 0.00 3.02
438 4742 8.746530 AGAGTTCTAAATAGTGTCCGAAATGTA 58.253 33.333 0.00 0.00 0.00 2.29
470 4807 5.494390 AACCTAGAGTTCACGGGTTTTAT 57.506 39.130 0.00 0.00 36.99 1.40
472 4809 3.851458 AACCTAGAGTTCACGGGTTTT 57.149 42.857 0.00 0.00 36.99 2.43
476 4813 3.064931 GTTGAAACCTAGAGTTCACGGG 58.935 50.000 7.36 0.00 37.88 5.28
494 4831 0.320683 TGCAGGTGAGACATCCGTTG 60.321 55.000 0.00 0.00 0.00 4.10
501 4838 2.172505 TCCTTTCTTTGCAGGTGAGACA 59.827 45.455 0.00 0.00 0.00 3.41
507 4844 4.408596 TCCAATTTTCCTTTCTTTGCAGGT 59.591 37.500 0.00 0.00 0.00 4.00
527 4864 9.921637 GGTTGTGTATTTTAGATTTTCATTCCA 57.078 29.630 0.00 0.00 0.00 3.53
529 4866 9.366216 GGGGTTGTGTATTTTAGATTTTCATTC 57.634 33.333 0.00 0.00 0.00 2.67
542 4880 4.054359 TGGCTATTGGGGTTGTGTATTT 57.946 40.909 0.00 0.00 0.00 1.40
602 4940 6.455647 TCTTTCTACGACATTCACACTTGAT 58.544 36.000 0.00 0.00 0.00 2.57
606 4944 5.639506 CCAATCTTTCTACGACATTCACACT 59.360 40.000 0.00 0.00 0.00 3.55
617 4955 8.818141 TGCTATTAGATTCCAATCTTTCTACG 57.182 34.615 7.12 0.00 42.96 3.51
648 4986 3.319137 ACTTCATGCTCTTGTCGCTTA 57.681 42.857 0.00 0.00 0.00 3.09
673 5036 1.006102 CGCTGGTTCTGTCGGTTCT 60.006 57.895 0.00 0.00 0.00 3.01
695 5058 7.067494 GTGACTTTGAACCAGGATGCTTATTAT 59.933 37.037 0.00 0.00 31.97 1.28
733 5096 0.543277 GCCATGACCATGACCTGAGA 59.457 55.000 11.28 0.00 41.20 3.27
798 5194 2.550277 AATTCCCCAATTGACCCCTC 57.450 50.000 7.12 0.00 30.49 4.30
839 5239 4.976116 GGAACATTTGACTGGAAAGTTTCG 59.024 41.667 9.46 0.00 0.00 3.46
891 5291 5.073554 AGCATGACATGAACCATATAAGGGA 59.926 40.000 19.76 0.00 0.00 4.20
911 5311 3.214328 GGAAATACCATGGTCGAAGCAT 58.786 45.455 23.76 5.01 36.65 3.79
912 5312 2.026729 TGGAAATACCATGGTCGAAGCA 60.027 45.455 23.76 2.15 44.64 3.91
913 5313 2.639065 TGGAAATACCATGGTCGAAGC 58.361 47.619 23.76 8.36 44.64 3.86
931 5331 1.448540 CGGCTACAGGCAAGAGTGG 60.449 63.158 3.53 0.00 44.01 4.00
939 5339 1.682451 TATGGTGGTCGGCTACAGGC 61.682 60.000 5.70 0.00 40.90 4.85
967 5384 2.409948 ATGCAAAGAGAGCAGTACCC 57.590 50.000 0.00 0.00 46.36 3.69
970 5387 6.477053 AGAAGATATGCAAAGAGAGCAGTA 57.523 37.500 0.00 0.00 46.36 2.74
986 5409 4.939052 GGAACCATCGGAGAAGAAGATA 57.061 45.455 0.00 0.00 43.58 1.98
1151 5589 1.951130 CCGCATGATCTTCCCGTCG 60.951 63.158 0.00 0.00 0.00 5.12
1287 5730 0.645868 GATCAACGGCGTGTAAGCTC 59.354 55.000 15.70 1.64 37.29 4.09
1383 5847 2.202892 GGGTCGATCCTGAACGGC 60.203 66.667 7.71 0.00 36.25 5.68
1389 5853 0.179045 GGTTGATGGGGTCGATCCTG 60.179 60.000 15.87 0.00 36.25 3.86
1629 6337 1.862147 CTCGTAGTCGGTCGCGTTG 60.862 63.158 5.77 0.00 37.69 4.10
1698 6406 0.108138 CTGCAGGTACAGGTGTAGGC 60.108 60.000 5.57 0.00 33.85 3.93
1859 6661 0.470456 TACCACACCCCAGTTCGACT 60.470 55.000 0.00 0.00 0.00 4.18
1860 6662 0.320160 GTACCACACCCCAGTTCGAC 60.320 60.000 0.00 0.00 0.00 4.20
1861 6663 0.759812 TGTACCACACCCCAGTTCGA 60.760 55.000 0.00 0.00 0.00 3.71
1862 6664 0.320421 CTGTACCACACCCCAGTTCG 60.320 60.000 0.00 0.00 0.00 3.95
1863 6665 1.053424 TCTGTACCACACCCCAGTTC 58.947 55.000 0.00 0.00 0.00 3.01
1864 6666 1.420138 CTTCTGTACCACACCCCAGTT 59.580 52.381 0.00 0.00 0.00 3.16
1865 6667 1.056660 CTTCTGTACCACACCCCAGT 58.943 55.000 0.00 0.00 0.00 4.00
1866 6668 1.348064 TCTTCTGTACCACACCCCAG 58.652 55.000 0.00 0.00 0.00 4.45
1867 6669 1.418637 GTTCTTCTGTACCACACCCCA 59.581 52.381 0.00 0.00 0.00 4.96
1868 6670 1.418637 TGTTCTTCTGTACCACACCCC 59.581 52.381 0.00 0.00 0.00 4.95
1869 6671 2.922740 TGTTCTTCTGTACCACACCC 57.077 50.000 0.00 0.00 0.00 4.61
1870 6672 3.560068 CACTTGTTCTTCTGTACCACACC 59.440 47.826 0.00 0.00 0.00 4.16
1871 6673 3.560068 CCACTTGTTCTTCTGTACCACAC 59.440 47.826 0.00 0.00 0.00 3.82
1872 6674 3.804036 CCACTTGTTCTTCTGTACCACA 58.196 45.455 0.00 0.00 0.00 4.17
1873 6675 2.548480 GCCACTTGTTCTTCTGTACCAC 59.452 50.000 0.00 0.00 0.00 4.16
1874 6676 2.438021 AGCCACTTGTTCTTCTGTACCA 59.562 45.455 0.00 0.00 0.00 3.25
1875 6677 3.127425 AGCCACTTGTTCTTCTGTACC 57.873 47.619 0.00 0.00 0.00 3.34
1876 6678 4.381411 AGAAGCCACTTGTTCTTCTGTAC 58.619 43.478 11.63 0.00 43.30 2.90
1877 6679 4.689612 AGAAGCCACTTGTTCTTCTGTA 57.310 40.909 11.63 0.00 43.30 2.74
1878 6680 3.567478 AGAAGCCACTTGTTCTTCTGT 57.433 42.857 11.63 0.00 43.30 3.41
1879 6681 3.999663 CCTAGAAGCCACTTGTTCTTCTG 59.000 47.826 17.67 11.29 44.26 3.02
1880 6682 3.008485 CCCTAGAAGCCACTTGTTCTTCT 59.992 47.826 14.85 14.85 45.78 2.85
1881 6683 3.339141 CCCTAGAAGCCACTTGTTCTTC 58.661 50.000 0.00 0.00 34.76 2.87
1882 6684 2.553247 GCCCTAGAAGCCACTTGTTCTT 60.553 50.000 0.00 0.00 34.76 2.52
1883 6685 1.003696 GCCCTAGAAGCCACTTGTTCT 59.996 52.381 0.00 0.00 36.90 3.01
1884 6686 1.454201 GCCCTAGAAGCCACTTGTTC 58.546 55.000 0.00 0.00 0.00 3.18
1885 6687 3.652581 GCCCTAGAAGCCACTTGTT 57.347 52.632 0.00 0.00 0.00 2.83
1917 6719 5.841810 ACTTGAGAAGTTCAGAGTTCAGAG 58.158 41.667 5.50 3.56 39.04 3.35
2010 6812 4.438744 CCACCAGTCCGATTTTCATAAAGC 60.439 45.833 0.00 0.00 0.00 3.51
2021 6823 0.190069 TATAGGCCCACCAGTCCGAT 59.810 55.000 0.00 0.00 39.06 4.18
2092 6908 1.065701 CACATAGGCGCTCTAACGAGT 59.934 52.381 7.64 3.16 39.53 4.18
2202 7053 8.950961 CGAATTATCTTTGCATACACATTCAAG 58.049 33.333 0.00 0.00 0.00 3.02
2205 7056 8.841444 AACGAATTATCTTTGCATACACATTC 57.159 30.769 0.00 0.00 0.00 2.67
2209 7060 7.748683 TGTGAAACGAATTATCTTTGCATACAC 59.251 33.333 0.00 0.00 42.39 2.90
2211 7062 8.093063 GTGTGAAACGAATTATCTTTGCATAC 57.907 34.615 0.00 0.00 42.39 2.39
2227 7078 5.372090 AAAGTAGGCTTGCGTGTGAAACG 62.372 47.826 0.00 0.00 44.03 3.60
2228 7079 1.226746 AGTAGGCTTGCGTGTGAAAC 58.773 50.000 0.00 0.00 37.35 2.78
2234 7086 5.796350 ACTATAAAAAGTAGGCTTGCGTG 57.204 39.130 0.00 0.00 34.71 5.34
2290 7142 8.204836 ACCATTTTTCTTATAGCTATGACGAGT 58.795 33.333 16.77 1.17 0.00 4.18
2293 7145 8.365399 TGACCATTTTTCTTATAGCTATGACG 57.635 34.615 16.77 4.64 0.00 4.35
2295 7147 9.905713 ACTTGACCATTTTTCTTATAGCTATGA 57.094 29.630 16.77 7.29 0.00 2.15
2300 7152 9.937175 GACATACTTGACCATTTTTCTTATAGC 57.063 33.333 0.00 0.00 0.00 2.97
2319 7171 9.896645 ATACATGAACATCTCTTTTGACATACT 57.103 29.630 0.00 0.00 0.00 2.12
2455 7307 7.960195 CGCCTTTTACTTTTGATTTGTTTTGTT 59.040 29.630 0.00 0.00 0.00 2.83
2456 7308 7.332182 TCGCCTTTTACTTTTGATTTGTTTTGT 59.668 29.630 0.00 0.00 0.00 2.83
2457 7309 7.680062 TCGCCTTTTACTTTTGATTTGTTTTG 58.320 30.769 0.00 0.00 0.00 2.44
2458 7310 7.835634 TCGCCTTTTACTTTTGATTTGTTTT 57.164 28.000 0.00 0.00 0.00 2.43
2459 7311 7.835634 TTCGCCTTTTACTTTTGATTTGTTT 57.164 28.000 0.00 0.00 0.00 2.83
2460 7312 7.332182 TGTTTCGCCTTTTACTTTTGATTTGTT 59.668 29.630 0.00 0.00 0.00 2.83
2461 7313 6.814146 TGTTTCGCCTTTTACTTTTGATTTGT 59.186 30.769 0.00 0.00 0.00 2.83
2462 7314 7.227992 TGTTTCGCCTTTTACTTTTGATTTG 57.772 32.000 0.00 0.00 0.00 2.32
2463 7315 7.835634 TTGTTTCGCCTTTTACTTTTGATTT 57.164 28.000 0.00 0.00 0.00 2.17
2464 7316 7.835634 TTTGTTTCGCCTTTTACTTTTGATT 57.164 28.000 0.00 0.00 0.00 2.57
2465 7317 9.535878 TTATTTGTTTCGCCTTTTACTTTTGAT 57.464 25.926 0.00 0.00 0.00 2.57
2466 7318 8.928270 TTATTTGTTTCGCCTTTTACTTTTGA 57.072 26.923 0.00 0.00 0.00 2.69
2467 7319 9.974750 TTTTATTTGTTTCGCCTTTTACTTTTG 57.025 25.926 0.00 0.00 0.00 2.44
2470 7322 9.535878 TCATTTTATTTGTTTCGCCTTTTACTT 57.464 25.926 0.00 0.00 0.00 2.24
2471 7323 9.705290 ATCATTTTATTTGTTTCGCCTTTTACT 57.295 25.926 0.00 0.00 0.00 2.24
2474 7326 9.050601 TGAATCATTTTATTTGTTTCGCCTTTT 57.949 25.926 0.00 0.00 0.00 2.27
2475 7327 8.600449 TGAATCATTTTATTTGTTTCGCCTTT 57.400 26.923 0.00 0.00 0.00 3.11
2476 7328 8.776376 ATGAATCATTTTATTTGTTTCGCCTT 57.224 26.923 0.00 0.00 0.00 4.35
2529 7381 9.787532 CACTTACGATGGATTTTGTTTTCATAT 57.212 29.630 0.00 0.00 0.00 1.78
2530 7382 9.004717 TCACTTACGATGGATTTTGTTTTCATA 57.995 29.630 0.00 0.00 0.00 2.15
2531 7383 7.881142 TCACTTACGATGGATTTTGTTTTCAT 58.119 30.769 0.00 0.00 0.00 2.57
2532 7384 7.265647 TCACTTACGATGGATTTTGTTTTCA 57.734 32.000 0.00 0.00 0.00 2.69
2533 7385 8.742554 AATCACTTACGATGGATTTTGTTTTC 57.257 30.769 0.00 0.00 0.00 2.29
2534 7386 8.977505 CAAATCACTTACGATGGATTTTGTTTT 58.022 29.630 0.00 0.00 37.75 2.43
2535 7387 8.356657 TCAAATCACTTACGATGGATTTTGTTT 58.643 29.630 0.00 0.00 37.75 2.83
2536 7388 7.881142 TCAAATCACTTACGATGGATTTTGTT 58.119 30.769 0.00 0.00 37.75 2.83
2537 7389 7.447374 TCAAATCACTTACGATGGATTTTGT 57.553 32.000 0.00 0.00 37.75 2.83
2538 7390 8.915871 ATTCAAATCACTTACGATGGATTTTG 57.084 30.769 0.00 0.00 37.75 2.44
2539 7391 8.739039 TGATTCAAATCACTTACGATGGATTTT 58.261 29.630 1.30 0.00 40.32 1.82
2540 7392 8.279970 TGATTCAAATCACTTACGATGGATTT 57.720 30.769 1.30 0.00 40.32 2.17
2541 7393 7.864108 TGATTCAAATCACTTACGATGGATT 57.136 32.000 1.30 0.00 40.32 3.01
2542 7394 7.864108 TTGATTCAAATCACTTACGATGGAT 57.136 32.000 4.94 0.00 44.54 3.41
2543 7395 7.680442 TTTGATTCAAATCACTTACGATGGA 57.320 32.000 7.74 0.00 44.54 3.41
2544 7396 8.741101 TTTTTGATTCAAATCACTTACGATGG 57.259 30.769 12.39 0.00 44.54 3.51
2545 7397 9.611284 TCTTTTTGATTCAAATCACTTACGATG 57.389 29.630 12.39 0.00 44.54 3.84
2546 7398 9.612620 GTCTTTTTGATTCAAATCACTTACGAT 57.387 29.630 12.39 0.00 44.54 3.73
2547 7399 8.073768 GGTCTTTTTGATTCAAATCACTTACGA 58.926 33.333 12.39 0.00 44.54 3.43
2548 7400 7.326063 GGGTCTTTTTGATTCAAATCACTTACG 59.674 37.037 12.39 0.00 44.54 3.18
2549 7401 8.360390 AGGGTCTTTTTGATTCAAATCACTTAC 58.640 33.333 12.39 6.03 44.54 2.34
2550 7402 8.477419 AGGGTCTTTTTGATTCAAATCACTTA 57.523 30.769 12.39 0.00 44.54 2.24
2551 7403 7.365497 AGGGTCTTTTTGATTCAAATCACTT 57.635 32.000 12.39 0.00 44.54 3.16
2552 7404 6.983906 AGGGTCTTTTTGATTCAAATCACT 57.016 33.333 12.39 7.58 44.54 3.41
2553 7405 6.801862 CGTAGGGTCTTTTTGATTCAAATCAC 59.198 38.462 12.39 9.14 44.54 3.06
2554 7406 6.712998 TCGTAGGGTCTTTTTGATTCAAATCA 59.287 34.615 12.39 1.30 43.28 2.57
2555 7407 7.141100 TCGTAGGGTCTTTTTGATTCAAATC 57.859 36.000 12.39 4.67 33.19 2.17
2556 7408 7.176690 ACATCGTAGGGTCTTTTTGATTCAAAT 59.823 33.333 12.39 0.00 33.19 2.32
2557 7409 6.488683 ACATCGTAGGGTCTTTTTGATTCAAA 59.511 34.615 7.74 7.74 0.00 2.69
2558 7410 6.001460 ACATCGTAGGGTCTTTTTGATTCAA 58.999 36.000 0.00 0.00 0.00 2.69
2559 7411 5.556915 ACATCGTAGGGTCTTTTTGATTCA 58.443 37.500 0.00 0.00 0.00 2.57
2560 7412 6.496338 AACATCGTAGGGTCTTTTTGATTC 57.504 37.500 0.00 0.00 0.00 2.52
2561 7413 6.894339 AAACATCGTAGGGTCTTTTTGATT 57.106 33.333 0.00 0.00 0.00 2.57
2562 7414 6.348213 CGAAAACATCGTAGGGTCTTTTTGAT 60.348 38.462 0.00 0.00 46.52 2.57
2563 7415 5.049954 CGAAAACATCGTAGGGTCTTTTTGA 60.050 40.000 0.00 0.00 46.52 2.69
2564 7416 5.144359 CGAAAACATCGTAGGGTCTTTTTG 58.856 41.667 0.00 0.00 46.52 2.44
2565 7417 5.352643 CGAAAACATCGTAGGGTCTTTTT 57.647 39.130 0.00 0.00 46.52 1.94
2595 7447 4.525487 TGGAAGAGCTGAGATGCAATTTTT 59.475 37.500 0.00 0.00 34.99 1.94
2596 7448 4.084287 TGGAAGAGCTGAGATGCAATTTT 58.916 39.130 0.00 0.00 34.99 1.82
2597 7449 3.693807 TGGAAGAGCTGAGATGCAATTT 58.306 40.909 0.00 0.00 34.99 1.82
2598 7450 3.361281 TGGAAGAGCTGAGATGCAATT 57.639 42.857 0.00 0.00 34.99 2.32
2599 7451 3.361281 TTGGAAGAGCTGAGATGCAAT 57.639 42.857 0.00 0.00 34.99 3.56
2600 7452 2.865119 TTGGAAGAGCTGAGATGCAA 57.135 45.000 0.00 0.00 34.99 4.08
2601 7453 2.865119 TTTGGAAGAGCTGAGATGCA 57.135 45.000 0.00 0.00 34.99 3.96
2602 7454 3.543665 AGATTTGGAAGAGCTGAGATGC 58.456 45.455 0.00 0.00 0.00 3.91
2603 7455 4.767478 TGAGATTTGGAAGAGCTGAGATG 58.233 43.478 0.00 0.00 0.00 2.90
2604 7456 5.432680 TTGAGATTTGGAAGAGCTGAGAT 57.567 39.130 0.00 0.00 0.00 2.75
2605 7457 4.897509 TTGAGATTTGGAAGAGCTGAGA 57.102 40.909 0.00 0.00 0.00 3.27
2606 7458 7.804843 AATATTGAGATTTGGAAGAGCTGAG 57.195 36.000 0.00 0.00 0.00 3.35
2607 7459 8.051535 AGAAATATTGAGATTTGGAAGAGCTGA 58.948 33.333 0.00 0.00 0.00 4.26
2608 7460 8.223177 AGAAATATTGAGATTTGGAAGAGCTG 57.777 34.615 0.00 0.00 0.00 4.24
2609 7461 8.684520 CAAGAAATATTGAGATTTGGAAGAGCT 58.315 33.333 0.00 0.00 31.55 4.09
2610 7462 7.434602 GCAAGAAATATTGAGATTTGGAAGAGC 59.565 37.037 0.00 0.00 31.55 4.09
2611 7463 8.684520 AGCAAGAAATATTGAGATTTGGAAGAG 58.315 33.333 0.00 0.00 31.55 2.85
2612 7464 8.585471 AGCAAGAAATATTGAGATTTGGAAGA 57.415 30.769 0.00 0.00 31.55 2.87
2613 7465 9.947669 CTAGCAAGAAATATTGAGATTTGGAAG 57.052 33.333 0.00 0.00 31.55 3.46
2614 7466 8.906867 CCTAGCAAGAAATATTGAGATTTGGAA 58.093 33.333 0.00 0.00 31.55 3.53
2615 7467 8.055181 ACCTAGCAAGAAATATTGAGATTTGGA 58.945 33.333 0.00 0.00 31.55 3.53
2616 7468 8.133627 CACCTAGCAAGAAATATTGAGATTTGG 58.866 37.037 0.00 0.00 31.55 3.28
2617 7469 7.646922 GCACCTAGCAAGAAATATTGAGATTTG 59.353 37.037 0.00 0.00 44.79 2.32
2618 7470 7.710896 GCACCTAGCAAGAAATATTGAGATTT 58.289 34.615 0.00 0.00 44.79 2.17
2619 7471 7.269477 GCACCTAGCAAGAAATATTGAGATT 57.731 36.000 0.00 0.00 44.79 2.40
2620 7472 6.874288 GCACCTAGCAAGAAATATTGAGAT 57.126 37.500 0.00 0.00 44.79 2.75
2635 7487 1.470098 CATCAAACAGTGGCACCTAGC 59.530 52.381 15.27 0.00 44.65 3.42
2636 7488 3.057969 TCATCAAACAGTGGCACCTAG 57.942 47.619 15.27 7.41 0.00 3.02
2637 7489 3.500448 TTCATCAAACAGTGGCACCTA 57.500 42.857 15.27 0.00 0.00 3.08
2638 7490 2.363306 TTCATCAAACAGTGGCACCT 57.637 45.000 15.27 0.00 0.00 4.00
2639 7491 2.557924 TCATTCATCAAACAGTGGCACC 59.442 45.455 15.27 0.00 0.00 5.01
2640 7492 3.921119 TCATTCATCAAACAGTGGCAC 57.079 42.857 10.29 10.29 0.00 5.01
2641 7493 5.124297 CACTATCATTCATCAAACAGTGGCA 59.876 40.000 0.00 0.00 0.00 4.92
2642 7494 5.575957 CACTATCATTCATCAAACAGTGGC 58.424 41.667 0.00 0.00 0.00 5.01
2643 7495 5.356190 AGCACTATCATTCATCAAACAGTGG 59.644 40.000 0.00 0.00 34.21 4.00
2644 7496 6.432607 AGCACTATCATTCATCAAACAGTG 57.567 37.500 0.00 0.00 36.18 3.66
2645 7497 6.094603 GGAAGCACTATCATTCATCAAACAGT 59.905 38.462 0.00 0.00 0.00 3.55
2646 7498 6.459298 GGGAAGCACTATCATTCATCAAACAG 60.459 42.308 0.00 0.00 0.00 3.16
2647 7499 5.357878 GGGAAGCACTATCATTCATCAAACA 59.642 40.000 0.00 0.00 0.00 2.83
2648 7500 5.221126 GGGGAAGCACTATCATTCATCAAAC 60.221 44.000 0.00 0.00 0.00 2.93
2649 7501 4.889409 GGGGAAGCACTATCATTCATCAAA 59.111 41.667 0.00 0.00 0.00 2.69
2650 7502 4.464008 GGGGAAGCACTATCATTCATCAA 58.536 43.478 0.00 0.00 0.00 2.57
2651 7503 3.181440 GGGGGAAGCACTATCATTCATCA 60.181 47.826 0.00 0.00 0.00 3.07
2652 7504 3.073650 AGGGGGAAGCACTATCATTCATC 59.926 47.826 0.00 0.00 0.00 2.92
2653 7505 3.059097 AGGGGGAAGCACTATCATTCAT 58.941 45.455 0.00 0.00 0.00 2.57
2654 7506 2.492025 AGGGGGAAGCACTATCATTCA 58.508 47.619 0.00 0.00 0.00 2.57
2655 7507 3.584733 AAGGGGGAAGCACTATCATTC 57.415 47.619 0.00 0.00 0.00 2.67
2656 7508 3.269381 TGAAAGGGGGAAGCACTATCATT 59.731 43.478 0.00 0.00 0.00 2.57
2657 7509 2.852449 TGAAAGGGGGAAGCACTATCAT 59.148 45.455 0.00 0.00 0.00 2.45
2658 7510 2.274542 TGAAAGGGGGAAGCACTATCA 58.725 47.619 0.00 0.00 0.00 2.15
2659 7511 3.366052 TTGAAAGGGGGAAGCACTATC 57.634 47.619 0.00 0.00 0.00 2.08
2660 7512 3.181423 TGTTTGAAAGGGGGAAGCACTAT 60.181 43.478 0.00 0.00 0.00 2.12
2661 7513 2.175931 TGTTTGAAAGGGGGAAGCACTA 59.824 45.455 0.00 0.00 0.00 2.74
2662 7514 1.063266 TGTTTGAAAGGGGGAAGCACT 60.063 47.619 0.00 0.00 0.00 4.40
2663 7515 1.408969 TGTTTGAAAGGGGGAAGCAC 58.591 50.000 0.00 0.00 0.00 4.40
2664 7516 2.397044 ATGTTTGAAAGGGGGAAGCA 57.603 45.000 0.00 0.00 0.00 3.91
2665 7517 4.882842 TTTATGTTTGAAAGGGGGAAGC 57.117 40.909 0.00 0.00 0.00 3.86
2666 7518 7.344352 TCCATATTTATGTTTGAAAGGGGGAAG 59.656 37.037 0.00 0.00 31.82 3.46
2667 7519 7.192628 TCCATATTTATGTTTGAAAGGGGGAA 58.807 34.615 0.00 0.00 31.82 3.97
2668 7520 6.746894 TCCATATTTATGTTTGAAAGGGGGA 58.253 36.000 0.00 0.00 31.82 4.81
2669 7521 7.430760 TTCCATATTTATGTTTGAAAGGGGG 57.569 36.000 0.00 0.00 31.82 5.40
2670 7522 7.768582 GGTTTCCATATTTATGTTTGAAAGGGG 59.231 37.037 0.00 0.00 28.86 4.79
2671 7523 7.491048 CGGTTTCCATATTTATGTTTGAAAGGG 59.509 37.037 0.00 0.00 28.86 3.95
2672 7524 8.247562 TCGGTTTCCATATTTATGTTTGAAAGG 58.752 33.333 0.00 0.00 28.86 3.11
2673 7525 9.801873 ATCGGTTTCCATATTTATGTTTGAAAG 57.198 29.630 0.00 0.00 28.86 2.62
2680 7532 9.621629 TGTCTAAATCGGTTTCCATATTTATGT 57.378 29.630 0.00 0.00 31.82 2.29
2686 7538 9.847224 ACTAAATGTCTAAATCGGTTTCCATAT 57.153 29.630 0.00 0.00 0.00 1.78
2688 7540 9.106070 GTACTAAATGTCTAAATCGGTTTCCAT 57.894 33.333 0.00 0.00 0.00 3.41
2689 7541 8.316214 AGTACTAAATGTCTAAATCGGTTTCCA 58.684 33.333 0.00 0.00 0.00 3.53
2690 7542 8.713737 AGTACTAAATGTCTAAATCGGTTTCC 57.286 34.615 0.00 0.00 0.00 3.13
2729 7581 9.620660 GACCTTCACGTCAAATTGTAAAATTAT 57.379 29.630 0.00 0.00 32.74 1.28
2730 7582 8.622157 TGACCTTCACGTCAAATTGTAAAATTA 58.378 29.630 0.00 0.00 39.78 1.40
2731 7583 7.484975 TGACCTTCACGTCAAATTGTAAAATT 58.515 30.769 0.00 0.00 39.78 1.82
2732 7584 7.033530 TGACCTTCACGTCAAATTGTAAAAT 57.966 32.000 0.00 0.00 39.78 1.82
2733 7585 6.438259 TGACCTTCACGTCAAATTGTAAAA 57.562 33.333 0.00 0.00 39.78 1.52
2734 7586 6.438259 TTGACCTTCACGTCAAATTGTAAA 57.562 33.333 1.81 0.00 46.92 2.01
2763 7615 9.657419 AAAAGAAGATGTCATTGTCTTGTTTTT 57.343 25.926 13.03 7.87 46.67 1.94
2765 7617 8.469200 TGAAAAGAAGATGTCATTGTCTTGTTT 58.531 29.630 10.92 7.85 44.68 2.83
2766 7618 7.999679 TGAAAAGAAGATGTCATTGTCTTGTT 58.000 30.769 10.92 3.04 38.95 2.83
2767 7619 7.572523 TGAAAAGAAGATGTCATTGTCTTGT 57.427 32.000 10.92 7.09 34.97 3.16
2786 7638 3.090037 TCCCGTGGTTTGAACTTGAAAA 58.910 40.909 0.00 0.00 0.00 2.29
2787 7639 2.724454 TCCCGTGGTTTGAACTTGAAA 58.276 42.857 0.00 0.00 0.00 2.69
2788 7640 2.421751 TCCCGTGGTTTGAACTTGAA 57.578 45.000 0.00 0.00 0.00 2.69
2789 7641 2.500229 GATCCCGTGGTTTGAACTTGA 58.500 47.619 0.00 0.00 0.00 3.02
2790 7642 1.539827 GGATCCCGTGGTTTGAACTTG 59.460 52.381 0.00 0.00 0.00 3.16
2791 7643 1.144093 TGGATCCCGTGGTTTGAACTT 59.856 47.619 9.90 0.00 0.00 2.66
2792 7644 0.768622 TGGATCCCGTGGTTTGAACT 59.231 50.000 9.90 0.00 0.00 3.01
2793 7645 0.879090 GTGGATCCCGTGGTTTGAAC 59.121 55.000 9.90 0.00 0.00 3.18
2794 7646 0.474614 TGTGGATCCCGTGGTTTGAA 59.525 50.000 9.90 0.00 0.00 2.69
2795 7647 0.036164 CTGTGGATCCCGTGGTTTGA 59.964 55.000 9.90 0.00 0.00 2.69
2796 7648 0.036164 TCTGTGGATCCCGTGGTTTG 59.964 55.000 9.90 0.00 0.00 2.93
2797 7649 0.768622 TTCTGTGGATCCCGTGGTTT 59.231 50.000 9.90 0.00 0.00 3.27
2798 7650 0.768622 TTTCTGTGGATCCCGTGGTT 59.231 50.000 9.90 0.00 0.00 3.67
2799 7651 0.036306 GTTTCTGTGGATCCCGTGGT 59.964 55.000 9.90 0.00 0.00 4.16
2800 7652 1.019278 CGTTTCTGTGGATCCCGTGG 61.019 60.000 9.90 0.00 0.00 4.94
2801 7653 1.019278 CCGTTTCTGTGGATCCCGTG 61.019 60.000 9.90 0.00 0.00 4.94
2802 7654 1.295423 CCGTTTCTGTGGATCCCGT 59.705 57.895 9.90 0.00 0.00 5.28
2803 7655 1.449601 CCCGTTTCTGTGGATCCCG 60.450 63.158 9.90 3.14 0.00 5.14
2804 7656 1.077716 CCCCGTTTCTGTGGATCCC 60.078 63.158 9.90 0.85 0.00 3.85
2805 7657 0.392595 GACCCCGTTTCTGTGGATCC 60.393 60.000 4.20 4.20 0.00 3.36
2806 7658 0.392595 GGACCCCGTTTCTGTGGATC 60.393 60.000 0.00 0.00 0.00 3.36
2807 7659 0.840722 AGGACCCCGTTTCTGTGGAT 60.841 55.000 0.00 0.00 0.00 3.41
2808 7660 1.057851 AAGGACCCCGTTTCTGTGGA 61.058 55.000 0.00 0.00 0.00 4.02
2809 7661 0.605589 GAAGGACCCCGTTTCTGTGG 60.606 60.000 0.00 0.00 0.00 4.17
2810 7662 0.107831 TGAAGGACCCCGTTTCTGTG 59.892 55.000 0.00 0.00 0.00 3.66
2811 7663 0.841289 TTGAAGGACCCCGTTTCTGT 59.159 50.000 0.00 0.00 0.00 3.41
2812 7664 1.202770 AGTTGAAGGACCCCGTTTCTG 60.203 52.381 0.00 0.00 0.00 3.02
2813 7665 1.071857 GAGTTGAAGGACCCCGTTTCT 59.928 52.381 0.00 0.00 0.00 2.52
2814 7666 1.520494 GAGTTGAAGGACCCCGTTTC 58.480 55.000 0.00 0.00 0.00 2.78
2815 7667 0.250166 CGAGTTGAAGGACCCCGTTT 60.250 55.000 0.00 0.00 0.00 3.60
2816 7668 1.117142 TCGAGTTGAAGGACCCCGTT 61.117 55.000 0.00 0.00 0.00 4.44
2817 7669 1.117142 TTCGAGTTGAAGGACCCCGT 61.117 55.000 0.00 0.00 31.44 5.28
2818 7670 0.669625 GTTCGAGTTGAAGGACCCCG 60.670 60.000 0.00 0.00 37.23 5.73
2819 7671 0.395312 TGTTCGAGTTGAAGGACCCC 59.605 55.000 0.00 0.00 37.23 4.95
2820 7672 1.871676 GTTGTTCGAGTTGAAGGACCC 59.128 52.381 0.00 0.00 37.23 4.46
2821 7673 1.871676 GGTTGTTCGAGTTGAAGGACC 59.128 52.381 8.40 8.40 37.23 4.46
2822 7674 1.525619 CGGTTGTTCGAGTTGAAGGAC 59.474 52.381 0.00 0.00 37.23 3.85
2823 7675 1.409790 TCGGTTGTTCGAGTTGAAGGA 59.590 47.619 0.00 0.00 37.23 3.36
2824 7676 1.860676 TCGGTTGTTCGAGTTGAAGG 58.139 50.000 0.00 0.00 37.23 3.46
2825 7677 5.779806 ATTATCGGTTGTTCGAGTTGAAG 57.220 39.130 0.00 0.00 42.69 3.02
2826 7678 7.009815 GTGATATTATCGGTTGTTCGAGTTGAA 59.990 37.037 0.00 0.00 42.69 2.69
2827 7679 6.474427 GTGATATTATCGGTTGTTCGAGTTGA 59.526 38.462 0.00 0.00 42.69 3.18
2828 7680 6.475727 AGTGATATTATCGGTTGTTCGAGTTG 59.524 38.462 0.00 0.00 42.69 3.16
2829 7681 6.570692 AGTGATATTATCGGTTGTTCGAGTT 58.429 36.000 0.00 0.00 42.69 3.01
2830 7682 6.145338 AGTGATATTATCGGTTGTTCGAGT 57.855 37.500 0.00 0.00 42.69 4.18
2831 7683 5.339875 CGAGTGATATTATCGGTTGTTCGAG 59.660 44.000 0.00 0.00 42.69 4.04
2832 7684 5.209977 CGAGTGATATTATCGGTTGTTCGA 58.790 41.667 0.00 0.00 43.61 3.71
2833 7685 4.974275 ACGAGTGATATTATCGGTTGTTCG 59.026 41.667 9.16 5.06 40.67 3.95
2834 7686 8.516811 AATACGAGTGATATTATCGGTTGTTC 57.483 34.615 9.16 0.00 40.67 3.18
2835 7687 9.403110 GTAATACGAGTGATATTATCGGTTGTT 57.597 33.333 9.16 3.01 40.67 2.83
2836 7688 8.570488 TGTAATACGAGTGATATTATCGGTTGT 58.430 33.333 9.16 2.31 40.67 3.32
2837 7689 8.959734 TGTAATACGAGTGATATTATCGGTTG 57.040 34.615 9.16 0.00 40.67 3.77
2838 7690 7.754027 GCTGTAATACGAGTGATATTATCGGTT 59.246 37.037 9.16 6.67 40.67 4.44
2839 7691 7.249147 GCTGTAATACGAGTGATATTATCGGT 58.751 38.462 9.16 0.00 40.67 4.69
2840 7692 6.691818 GGCTGTAATACGAGTGATATTATCGG 59.308 42.308 9.16 0.00 40.67 4.18
2841 7693 7.473366 AGGCTGTAATACGAGTGATATTATCG 58.527 38.462 0.00 4.27 42.04 2.92
2844 7696 9.293404 AGTTAGGCTGTAATACGAGTGATATTA 57.707 33.333 0.00 0.00 0.00 0.98
2845 7697 8.179509 AGTTAGGCTGTAATACGAGTGATATT 57.820 34.615 0.00 0.00 0.00 1.28
2846 7698 7.447545 TGAGTTAGGCTGTAATACGAGTGATAT 59.552 37.037 0.00 0.00 0.00 1.63
2847 7699 6.769341 TGAGTTAGGCTGTAATACGAGTGATA 59.231 38.462 0.00 0.00 0.00 2.15
2848 7700 5.593095 TGAGTTAGGCTGTAATACGAGTGAT 59.407 40.000 0.00 0.00 0.00 3.06
2849 7701 4.945543 TGAGTTAGGCTGTAATACGAGTGA 59.054 41.667 0.00 0.00 0.00 3.41
2850 7702 5.244785 TGAGTTAGGCTGTAATACGAGTG 57.755 43.478 0.00 0.00 0.00 3.51
2851 7703 5.679127 GCTTGAGTTAGGCTGTAATACGAGT 60.679 44.000 0.00 0.00 0.00 4.18
2852 7704 4.740695 GCTTGAGTTAGGCTGTAATACGAG 59.259 45.833 0.00 0.00 0.00 4.18
2853 7705 4.441079 GGCTTGAGTTAGGCTGTAATACGA 60.441 45.833 0.00 0.00 37.69 3.43
2854 7706 3.802685 GGCTTGAGTTAGGCTGTAATACG 59.197 47.826 0.00 0.00 37.69 3.06
2855 7707 4.127907 GGGCTTGAGTTAGGCTGTAATAC 58.872 47.826 0.00 0.00 40.34 1.89
2856 7708 3.778075 TGGGCTTGAGTTAGGCTGTAATA 59.222 43.478 0.00 0.00 40.34 0.98
2857 7709 2.576191 TGGGCTTGAGTTAGGCTGTAAT 59.424 45.455 0.00 0.00 40.34 1.89
2858 7710 1.982226 TGGGCTTGAGTTAGGCTGTAA 59.018 47.619 0.00 0.00 40.34 2.41
2859 7711 1.555075 CTGGGCTTGAGTTAGGCTGTA 59.445 52.381 0.00 0.00 40.34 2.74
2860 7712 0.326264 CTGGGCTTGAGTTAGGCTGT 59.674 55.000 0.00 0.00 40.34 4.40
2861 7713 0.326264 ACTGGGCTTGAGTTAGGCTG 59.674 55.000 0.00 0.00 40.34 4.85
2862 7714 0.615850 GACTGGGCTTGAGTTAGGCT 59.384 55.000 0.00 0.00 40.34 4.58
2863 7715 0.324943 TGACTGGGCTTGAGTTAGGC 59.675 55.000 0.00 0.00 39.80 3.93
2864 7716 4.696479 ATATGACTGGGCTTGAGTTAGG 57.304 45.455 0.00 0.00 0.00 2.69
2865 7717 5.674525 TCAATATGACTGGGCTTGAGTTAG 58.325 41.667 0.00 0.00 0.00 2.34
2866 7718 5.692115 TCAATATGACTGGGCTTGAGTTA 57.308 39.130 0.00 0.00 0.00 2.24
2867 7719 4.574674 TCAATATGACTGGGCTTGAGTT 57.425 40.909 0.00 0.00 0.00 3.01
2868 7720 4.785346 ATCAATATGACTGGGCTTGAGT 57.215 40.909 0.00 0.00 30.13 3.41
2869 7721 7.309012 CCAATAATCAATATGACTGGGCTTGAG 60.309 40.741 0.00 0.00 30.13 3.02
2870 7722 6.491062 CCAATAATCAATATGACTGGGCTTGA 59.509 38.462 0.00 0.00 0.00 3.02
2871 7723 6.266103 ACCAATAATCAATATGACTGGGCTTG 59.734 38.462 0.00 0.00 0.00 4.01
2872 7724 6.376248 ACCAATAATCAATATGACTGGGCTT 58.624 36.000 0.00 0.00 0.00 4.35
2873 7725 5.957132 ACCAATAATCAATATGACTGGGCT 58.043 37.500 0.00 0.00 0.00 5.19
2874 7726 7.759489 TTACCAATAATCAATATGACTGGGC 57.241 36.000 0.00 0.00 0.00 5.36
2885 7737 8.511321 GCGGTGATCATTATTACCAATAATCAA 58.489 33.333 0.00 0.00 40.91 2.57
2886 7738 7.148490 CGCGGTGATCATTATTACCAATAATCA 60.148 37.037 0.00 0.00 40.91 2.57
2887 7739 7.180079 CGCGGTGATCATTATTACCAATAATC 58.820 38.462 0.00 0.00 40.91 1.75
2888 7740 6.093495 CCGCGGTGATCATTATTACCAATAAT 59.907 38.462 19.50 0.00 40.91 1.28
2889 7741 5.410132 CCGCGGTGATCATTATTACCAATAA 59.590 40.000 19.50 0.00 40.91 1.40
2890 7742 4.932799 CCGCGGTGATCATTATTACCAATA 59.067 41.667 19.50 0.00 40.91 1.90
2891 7743 3.751175 CCGCGGTGATCATTATTACCAAT 59.249 43.478 19.50 0.00 40.91 3.16
2892 7744 3.135225 CCGCGGTGATCATTATTACCAA 58.865 45.455 19.50 0.00 40.91 3.67
2893 7745 2.761559 CCGCGGTGATCATTATTACCA 58.238 47.619 19.50 0.00 40.91 3.25
2894 7746 1.463444 GCCGCGGTGATCATTATTACC 59.537 52.381 28.70 0.00 38.19 2.85
2895 7747 2.157668 CAGCCGCGGTGATCATTATTAC 59.842 50.000 28.70 4.56 32.22 1.89
2896 7748 2.412870 CAGCCGCGGTGATCATTATTA 58.587 47.619 28.70 0.00 32.22 0.98
2897 7749 1.229428 CAGCCGCGGTGATCATTATT 58.771 50.000 28.70 0.00 32.22 1.40
2898 7750 0.603707 CCAGCCGCGGTGATCATTAT 60.604 55.000 28.70 0.00 32.22 1.28
2899 7751 1.227527 CCAGCCGCGGTGATCATTA 60.228 57.895 28.70 0.00 32.22 1.90
2900 7752 2.514592 CCAGCCGCGGTGATCATT 60.515 61.111 28.70 0.76 32.22 2.57
2901 7753 3.329542 AACCAGCCGCGGTGATCAT 62.330 57.895 28.70 6.32 39.95 2.45
2902 7754 4.015406 AACCAGCCGCGGTGATCA 62.015 61.111 28.70 0.00 39.95 2.92
2903 7755 3.499737 CAACCAGCCGCGGTGATC 61.500 66.667 28.70 10.05 39.95 2.92
2907 7759 2.265467 ATATTCCAACCAGCCGCGGT 62.265 55.000 28.70 11.01 42.71 5.68
2908 7760 0.250124 TATATTCCAACCAGCCGCGG 60.250 55.000 24.05 24.05 0.00 6.46
2909 7761 1.148310 CTATATTCCAACCAGCCGCG 58.852 55.000 0.00 0.00 0.00 6.46
2910 7762 1.071699 TCCTATATTCCAACCAGCCGC 59.928 52.381 0.00 0.00 0.00 6.53
2911 7763 3.703001 ATCCTATATTCCAACCAGCCG 57.297 47.619 0.00 0.00 0.00 5.52
2912 7764 4.985538 TCAATCCTATATTCCAACCAGCC 58.014 43.478 0.00 0.00 0.00 4.85
2913 7765 6.959639 TTTCAATCCTATATTCCAACCAGC 57.040 37.500 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.