Multiple sequence alignment - TraesCS3D01G045900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G045900 chr3D 100.000 2756 0 0 1 2756 17441283 17438528 0.000000e+00 5090.0
1 TraesCS3D01G045900 chr3A 87.500 1856 135 53 446 2235 19382886 19381062 0.000000e+00 2052.0
2 TraesCS3D01G045900 chr3A 80.208 192 22 9 74 264 19446194 19446018 2.230000e-26 130.0
3 TraesCS3D01G045900 chr3B 90.704 1377 70 19 458 1813 25136933 25135594 0.000000e+00 1781.0
4 TraesCS3D01G045900 chr3B 86.679 533 34 20 1907 2425 25135560 25135051 8.620000e-155 556.0
5 TraesCS3D01G045900 chr2B 88.421 95 9 1 146 240 247368537 247368629 2.240000e-21 113.0
6 TraesCS3D01G045900 chr2B 85.149 101 12 3 135 235 175632207 175632110 1.750000e-17 100.0
7 TraesCS3D01G045900 chr2A 89.655 87 6 3 147 233 182008967 182009050 1.040000e-19 108.0
8 TraesCS3D01G045900 chr2A 87.097 93 9 3 141 232 28816469 28816559 4.860000e-18 102.0
9 TraesCS3D01G045900 chr2D 86.957 92 9 3 144 234 74975998 74975909 1.750000e-17 100.0
10 TraesCS3D01G045900 chr6A 84.694 98 11 4 146 241 263872886 263872791 8.130000e-16 95.3
11 TraesCS3D01G045900 chr1D 85.714 91 12 1 136 225 147896334 147896244 8.130000e-16 95.3
12 TraesCS3D01G045900 chr1A 85.263 95 11 3 144 237 546795221 546795129 8.130000e-16 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G045900 chr3D 17438528 17441283 2755 True 5090.0 5090 100.0000 1 2756 1 chr3D.!!$R1 2755
1 TraesCS3D01G045900 chr3A 19381062 19382886 1824 True 2052.0 2052 87.5000 446 2235 1 chr3A.!!$R1 1789
2 TraesCS3D01G045900 chr3B 25135051 25136933 1882 True 1168.5 1781 88.6915 458 2425 2 chr3B.!!$R1 1967

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
323 324 0.387112 TGCGCGATTGCTTTTTCAGG 60.387 50.0 12.1 0.0 39.65 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2249 2333 0.037975 TAGCTTGTTCGTCCGTTCCC 60.038 55.0 0.0 0.0 0.0 3.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.793927 TGCATTTTTCGTACATATACCATGA 57.206 32.000 0.00 0.00 0.00 3.07
25 26 8.214721 TGCATTTTTCGTACATATACCATGAA 57.785 30.769 0.00 0.00 0.00 2.57
26 27 8.845227 TGCATTTTTCGTACATATACCATGAAT 58.155 29.630 0.00 0.00 0.00 2.57
155 156 7.862675 AGGCACATTTTATATATACTCCCTCC 58.137 38.462 0.00 0.00 0.00 4.30
156 157 6.761714 GGCACATTTTATATATACTCCCTCCG 59.238 42.308 0.00 0.00 0.00 4.63
157 158 7.328737 GCACATTTTATATATACTCCCTCCGT 58.671 38.462 0.00 0.00 0.00 4.69
158 159 8.472413 GCACATTTTATATATACTCCCTCCGTA 58.528 37.037 0.00 0.00 0.00 4.02
159 160 9.798994 CACATTTTATATATACTCCCTCCGTAC 57.201 37.037 0.00 0.00 0.00 3.67
160 161 8.975295 ACATTTTATATATACTCCCTCCGTACC 58.025 37.037 0.00 0.00 0.00 3.34
161 162 8.974238 CATTTTATATATACTCCCTCCGTACCA 58.026 37.037 0.00 0.00 0.00 3.25
162 163 8.954834 TTTTATATATACTCCCTCCGTACCAA 57.045 34.615 0.00 0.00 0.00 3.67
163 164 8.954834 TTTATATATACTCCCTCCGTACCAAA 57.045 34.615 0.00 0.00 0.00 3.28
164 165 8.954834 TTATATATACTCCCTCCGTACCAAAA 57.045 34.615 0.00 0.00 0.00 2.44
165 166 9.551339 TTATATATACTCCCTCCGTACCAAAAT 57.449 33.333 0.00 0.00 0.00 1.82
167 168 9.725206 ATATATACTCCCTCCGTACCAAAATAT 57.275 33.333 0.00 0.00 0.00 1.28
169 170 7.860649 ATACTCCCTCCGTACCAAAATATAA 57.139 36.000 0.00 0.00 0.00 0.98
170 171 6.170846 ACTCCCTCCGTACCAAAATATAAG 57.829 41.667 0.00 0.00 0.00 1.73
171 172 5.901276 ACTCCCTCCGTACCAAAATATAAGA 59.099 40.000 0.00 0.00 0.00 2.10
172 173 6.165700 TCCCTCCGTACCAAAATATAAGAC 57.834 41.667 0.00 0.00 0.00 3.01
173 174 4.986659 CCCTCCGTACCAAAATATAAGACG 59.013 45.833 0.00 0.00 0.00 4.18
174 175 5.452356 CCCTCCGTACCAAAATATAAGACGT 60.452 44.000 0.00 0.00 0.00 4.34
175 176 6.044682 CCTCCGTACCAAAATATAAGACGTT 58.955 40.000 0.00 0.00 0.00 3.99
176 177 6.536224 CCTCCGTACCAAAATATAAGACGTTT 59.464 38.462 0.00 0.00 0.00 3.60
177 178 7.293402 TCCGTACCAAAATATAAGACGTTTG 57.707 36.000 0.00 0.00 0.00 2.93
178 179 6.873076 TCCGTACCAAAATATAAGACGTTTGT 59.127 34.615 0.00 0.00 30.61 2.83
179 180 6.957077 CCGTACCAAAATATAAGACGTTTGTG 59.043 38.462 0.00 0.00 30.61 3.33
180 181 6.463576 CGTACCAAAATATAAGACGTTTGTGC 59.536 38.462 0.00 0.00 30.61 4.57
181 182 6.320494 ACCAAAATATAAGACGTTTGTGCA 57.680 33.333 0.00 0.00 30.61 4.57
182 183 6.378582 ACCAAAATATAAGACGTTTGTGCAG 58.621 36.000 0.00 0.00 30.61 4.41
183 184 6.016610 ACCAAAATATAAGACGTTTGTGCAGT 60.017 34.615 0.00 0.00 30.61 4.40
184 185 6.861055 CCAAAATATAAGACGTTTGTGCAGTT 59.139 34.615 0.00 0.00 30.61 3.16
185 186 7.381139 CCAAAATATAAGACGTTTGTGCAGTTT 59.619 33.333 0.00 0.00 30.61 2.66
186 187 7.851822 AAATATAAGACGTTTGTGCAGTTTG 57.148 32.000 0.00 0.00 0.00 2.93
187 188 6.795098 ATATAAGACGTTTGTGCAGTTTGA 57.205 33.333 0.00 0.00 0.00 2.69
188 189 5.689383 ATAAGACGTTTGTGCAGTTTGAT 57.311 34.783 0.00 0.00 0.00 2.57
189 190 4.370364 AAGACGTTTGTGCAGTTTGATT 57.630 36.364 0.00 0.00 0.00 2.57
190 191 4.370364 AGACGTTTGTGCAGTTTGATTT 57.630 36.364 0.00 0.00 0.00 2.17
191 192 4.104776 AGACGTTTGTGCAGTTTGATTTG 58.895 39.130 0.00 0.00 0.00 2.32
192 193 3.843999 ACGTTTGTGCAGTTTGATTTGT 58.156 36.364 0.00 0.00 0.00 2.83
193 194 4.987832 ACGTTTGTGCAGTTTGATTTGTA 58.012 34.783 0.00 0.00 0.00 2.41
194 195 4.796312 ACGTTTGTGCAGTTTGATTTGTAC 59.204 37.500 0.00 0.00 0.00 2.90
195 196 5.034152 CGTTTGTGCAGTTTGATTTGTACT 58.966 37.500 0.00 0.00 32.15 2.73
196 197 5.052436 CGTTTGTGCAGTTTGATTTGTACTG 60.052 40.000 0.00 0.00 32.15 2.74
212 213 7.990541 TTTGTACTGCAAATACGTCGTATAT 57.009 32.000 17.84 6.33 41.68 0.86
213 214 7.990541 TTGTACTGCAAATACGTCGTATATT 57.009 32.000 17.84 11.39 33.53 1.28
214 215 7.990541 TGTACTGCAAATACGTCGTATATTT 57.009 32.000 17.84 9.06 33.45 1.40
215 216 8.410030 TGTACTGCAAATACGTCGTATATTTT 57.590 30.769 17.84 7.40 31.33 1.82
216 217 8.322428 TGTACTGCAAATACGTCGTATATTTTG 58.678 33.333 17.84 18.46 31.33 2.44
217 218 6.711579 ACTGCAAATACGTCGTATATTTTGG 58.288 36.000 22.13 13.74 31.33 3.28
218 219 6.314400 ACTGCAAATACGTCGTATATTTTGGT 59.686 34.615 22.13 14.18 31.33 3.67
219 220 7.492020 ACTGCAAATACGTCGTATATTTTGGTA 59.508 33.333 22.13 6.73 31.33 3.25
220 221 7.620215 TGCAAATACGTCGTATATTTTGGTAC 58.380 34.615 22.13 12.10 31.33 3.34
221 222 7.277319 TGCAAATACGTCGTATATTTTGGTACA 59.723 33.333 22.13 13.74 31.33 2.90
222 223 7.790673 GCAAATACGTCGTATATTTTGGTACAG 59.209 37.037 22.13 6.40 42.39 2.74
223 224 9.022915 CAAATACGTCGTATATTTTGGTACAGA 57.977 33.333 17.84 0.00 42.39 3.41
224 225 8.792831 AATACGTCGTATATTTTGGTACAGAG 57.207 34.615 17.84 0.00 42.39 3.35
225 226 6.441093 ACGTCGTATATTTTGGTACAGAGA 57.559 37.500 0.00 0.00 42.39 3.10
226 227 6.493116 ACGTCGTATATTTTGGTACAGAGAG 58.507 40.000 0.00 0.00 42.39 3.20
227 228 5.913514 CGTCGTATATTTTGGTACAGAGAGG 59.086 44.000 0.00 0.00 42.39 3.69
228 229 6.459298 CGTCGTATATTTTGGTACAGAGAGGT 60.459 42.308 0.00 0.00 42.39 3.85
229 230 7.254898 CGTCGTATATTTTGGTACAGAGAGGTA 60.255 40.741 0.00 0.00 42.39 3.08
230 231 8.074972 GTCGTATATTTTGGTACAGAGAGGTAG 58.925 40.741 0.00 0.00 42.39 3.18
231 232 7.776969 TCGTATATTTTGGTACAGAGAGGTAGT 59.223 37.037 0.00 0.00 42.39 2.73
232 233 9.060347 CGTATATTTTGGTACAGAGAGGTAGTA 57.940 37.037 0.00 0.00 42.39 1.82
234 235 8.834004 ATATTTTGGTACAGAGAGGTAGTACA 57.166 34.615 2.06 0.00 42.39 2.90
235 236 7.735326 ATTTTGGTACAGAGAGGTAGTACAT 57.265 36.000 2.06 0.00 42.39 2.29
236 237 6.525578 TTTGGTACAGAGAGGTAGTACATG 57.474 41.667 2.06 0.00 42.39 3.21
237 238 5.188988 TGGTACAGAGAGGTAGTACATGT 57.811 43.478 2.69 2.69 39.78 3.21
238 239 5.577100 TGGTACAGAGAGGTAGTACATGTT 58.423 41.667 2.30 0.00 39.78 2.71
239 240 6.014647 TGGTACAGAGAGGTAGTACATGTTT 58.985 40.000 2.30 0.00 39.78 2.83
240 241 7.177184 TGGTACAGAGAGGTAGTACATGTTTA 58.823 38.462 2.30 0.00 39.78 2.01
241 242 7.670979 TGGTACAGAGAGGTAGTACATGTTTAA 59.329 37.037 2.30 0.00 39.78 1.52
242 243 8.693625 GGTACAGAGAGGTAGTACATGTTTAAT 58.306 37.037 2.30 0.00 39.78 1.40
245 246 9.036980 ACAGAGAGGTAGTACATGTTTAATTCT 57.963 33.333 2.30 0.85 0.00 2.40
246 247 9.877178 CAGAGAGGTAGTACATGTTTAATTCTT 57.123 33.333 2.30 0.00 0.00 2.52
307 308 7.315419 ACACGTTTAACATTTTTCTAATGCG 57.685 32.000 0.00 0.00 0.00 4.73
308 309 6.129300 ACACGTTTAACATTTTTCTAATGCGC 60.129 34.615 0.00 0.00 0.00 6.09
309 310 5.058734 ACGTTTAACATTTTTCTAATGCGCG 59.941 36.000 0.00 0.00 0.00 6.86
310 311 5.281842 CGTTTAACATTTTTCTAATGCGCGA 59.718 36.000 12.10 0.00 0.00 5.87
311 312 6.021782 CGTTTAACATTTTTCTAATGCGCGAT 60.022 34.615 12.10 0.00 0.00 4.58
312 313 7.460896 CGTTTAACATTTTTCTAATGCGCGATT 60.461 33.333 12.10 9.69 0.00 3.34
313 314 5.685195 AACATTTTTCTAATGCGCGATTG 57.315 34.783 12.10 0.00 0.00 2.67
314 315 3.547468 ACATTTTTCTAATGCGCGATTGC 59.453 39.130 12.10 0.00 37.91 3.56
315 316 3.485947 TTTTTCTAATGCGCGATTGCT 57.514 38.095 12.10 0.00 39.65 3.91
316 317 3.485947 TTTTCTAATGCGCGATTGCTT 57.514 38.095 12.10 0.00 39.65 3.91
317 318 3.485947 TTTCTAATGCGCGATTGCTTT 57.514 38.095 12.10 0.00 39.65 3.51
318 319 3.485947 TTCTAATGCGCGATTGCTTTT 57.514 38.095 12.10 0.00 39.65 2.27
319 320 3.485947 TCTAATGCGCGATTGCTTTTT 57.514 38.095 12.10 0.00 39.65 1.94
320 321 3.425404 TCTAATGCGCGATTGCTTTTTC 58.575 40.909 12.10 0.00 39.65 2.29
321 322 2.063156 AATGCGCGATTGCTTTTTCA 57.937 40.000 12.10 0.00 39.65 2.69
322 323 1.621107 ATGCGCGATTGCTTTTTCAG 58.379 45.000 12.10 0.00 39.65 3.02
323 324 0.387112 TGCGCGATTGCTTTTTCAGG 60.387 50.000 12.10 0.00 39.65 3.86
324 325 0.387239 GCGCGATTGCTTTTTCAGGT 60.387 50.000 12.10 0.00 39.65 4.00
325 326 1.930371 GCGCGATTGCTTTTTCAGGTT 60.930 47.619 12.10 0.00 39.65 3.50
326 327 2.393764 CGCGATTGCTTTTTCAGGTTT 58.606 42.857 0.00 0.00 39.65 3.27
327 328 2.794350 CGCGATTGCTTTTTCAGGTTTT 59.206 40.909 0.00 0.00 39.65 2.43
328 329 3.361917 CGCGATTGCTTTTTCAGGTTTTG 60.362 43.478 0.00 0.00 39.65 2.44
329 330 3.555547 GCGATTGCTTTTTCAGGTTTTGT 59.444 39.130 0.00 0.00 38.39 2.83
330 331 4.742659 GCGATTGCTTTTTCAGGTTTTGTA 59.257 37.500 0.00 0.00 38.39 2.41
331 332 5.405269 GCGATTGCTTTTTCAGGTTTTGTAT 59.595 36.000 0.00 0.00 38.39 2.29
332 333 6.584563 GCGATTGCTTTTTCAGGTTTTGTATA 59.415 34.615 0.00 0.00 38.39 1.47
333 334 7.275560 GCGATTGCTTTTTCAGGTTTTGTATAT 59.724 33.333 0.00 0.00 38.39 0.86
334 335 9.781834 CGATTGCTTTTTCAGGTTTTGTATATA 57.218 29.630 0.00 0.00 0.00 0.86
366 367 9.996554 ATGATAGATATATTCAACCGAAACACA 57.003 29.630 0.00 0.00 34.01 3.72
367 368 9.825109 TGATAGATATATTCAACCGAAACACAA 57.175 29.630 0.00 0.00 34.01 3.33
369 370 7.016361 AGATATATTCAACCGAAACACAAGC 57.984 36.000 0.00 0.00 34.01 4.01
370 371 6.597672 AGATATATTCAACCGAAACACAAGCA 59.402 34.615 0.00 0.00 34.01 3.91
371 372 3.791973 ATTCAACCGAAACACAAGCAA 57.208 38.095 0.00 0.00 34.01 3.91
372 373 3.577649 TTCAACCGAAACACAAGCAAA 57.422 38.095 0.00 0.00 0.00 3.68
373 374 3.143807 TCAACCGAAACACAAGCAAAG 57.856 42.857 0.00 0.00 0.00 2.77
374 375 1.587946 CAACCGAAACACAAGCAAAGC 59.412 47.619 0.00 0.00 0.00 3.51
375 376 1.102978 ACCGAAACACAAGCAAAGCT 58.897 45.000 0.00 0.00 42.56 3.74
376 377 2.294074 ACCGAAACACAAGCAAAGCTA 58.706 42.857 0.00 0.00 38.25 3.32
377 378 2.685897 ACCGAAACACAAGCAAAGCTAA 59.314 40.909 0.00 0.00 38.25 3.09
378 379 3.129638 ACCGAAACACAAGCAAAGCTAAA 59.870 39.130 0.00 0.00 38.25 1.85
379 380 4.109050 CCGAAACACAAGCAAAGCTAAAA 58.891 39.130 0.00 0.00 38.25 1.52
380 381 4.744631 CCGAAACACAAGCAAAGCTAAAAT 59.255 37.500 0.00 0.00 38.25 1.82
381 382 5.332506 CCGAAACACAAGCAAAGCTAAAATG 60.333 40.000 0.00 0.00 38.25 2.32
382 383 5.458452 CGAAACACAAGCAAAGCTAAAATGA 59.542 36.000 0.00 0.00 38.25 2.57
383 384 6.144402 CGAAACACAAGCAAAGCTAAAATGAT 59.856 34.615 0.00 0.00 38.25 2.45
384 385 7.325821 CGAAACACAAGCAAAGCTAAAATGATA 59.674 33.333 0.00 0.00 38.25 2.15
385 386 8.885494 AAACACAAGCAAAGCTAAAATGATAA 57.115 26.923 0.00 0.00 38.25 1.75
386 387 8.885494 AACACAAGCAAAGCTAAAATGATAAA 57.115 26.923 0.00 0.00 38.25 1.40
387 388 8.885494 ACACAAGCAAAGCTAAAATGATAAAA 57.115 26.923 0.00 0.00 38.25 1.52
388 389 9.323985 ACACAAGCAAAGCTAAAATGATAAAAA 57.676 25.926 0.00 0.00 38.25 1.94
389 390 9.584839 CACAAGCAAAGCTAAAATGATAAAAAC 57.415 29.630 0.00 0.00 38.25 2.43
390 391 9.323985 ACAAGCAAAGCTAAAATGATAAAAACA 57.676 25.926 0.00 0.00 38.25 2.83
394 395 9.091255 GCAAAGCTAAAATGATAAAAACAAACG 57.909 29.630 0.00 0.00 0.00 3.60
395 396 9.091255 CAAAGCTAAAATGATAAAAACAAACGC 57.909 29.630 0.00 0.00 0.00 4.84
396 397 7.346208 AGCTAAAATGATAAAAACAAACGCC 57.654 32.000 0.00 0.00 0.00 5.68
397 398 6.088883 AGCTAAAATGATAAAAACAAACGCCG 59.911 34.615 0.00 0.00 0.00 6.46
398 399 6.088350 GCTAAAATGATAAAAACAAACGCCGA 59.912 34.615 0.00 0.00 0.00 5.54
399 400 6.830114 AAAATGATAAAAACAAACGCCGAA 57.170 29.167 0.00 0.00 0.00 4.30
400 401 7.414814 AAAATGATAAAAACAAACGCCGAAT 57.585 28.000 0.00 0.00 0.00 3.34
401 402 6.388259 AATGATAAAAACAAACGCCGAATG 57.612 33.333 0.00 0.00 0.00 2.67
402 403 3.670991 TGATAAAAACAAACGCCGAATGC 59.329 39.130 0.00 0.00 0.00 3.56
403 404 1.927895 AAAAACAAACGCCGAATGCA 58.072 40.000 0.00 0.00 41.33 3.96
404 405 1.927895 AAAACAAACGCCGAATGCAA 58.072 40.000 0.00 0.00 41.33 4.08
405 406 1.927895 AAACAAACGCCGAATGCAAA 58.072 40.000 0.00 0.00 41.33 3.68
406 407 1.927895 AACAAACGCCGAATGCAAAA 58.072 40.000 0.00 0.00 41.33 2.44
407 408 1.927895 ACAAACGCCGAATGCAAAAA 58.072 40.000 0.00 0.00 41.33 1.94
408 409 2.478831 ACAAACGCCGAATGCAAAAAT 58.521 38.095 0.00 0.00 41.33 1.82
409 410 2.220593 ACAAACGCCGAATGCAAAAATG 59.779 40.909 0.00 0.00 41.33 2.32
410 411 2.147436 AACGCCGAATGCAAAAATGT 57.853 40.000 0.00 0.00 41.33 2.71
411 412 1.417372 ACGCCGAATGCAAAAATGTG 58.583 45.000 0.00 0.00 41.33 3.21
412 413 1.000827 ACGCCGAATGCAAAAATGTGA 60.001 42.857 0.00 0.00 41.33 3.58
413 414 2.057316 CGCCGAATGCAAAAATGTGAA 58.943 42.857 0.00 0.00 41.33 3.18
414 415 2.159986 CGCCGAATGCAAAAATGTGAAC 60.160 45.455 0.00 0.00 41.33 3.18
415 416 2.799412 GCCGAATGCAAAAATGTGAACA 59.201 40.909 0.00 0.00 40.77 3.18
416 417 3.247173 GCCGAATGCAAAAATGTGAACAA 59.753 39.130 0.00 0.00 40.77 2.83
417 418 4.260538 GCCGAATGCAAAAATGTGAACAAA 60.261 37.500 0.00 0.00 40.77 2.83
418 419 5.728898 GCCGAATGCAAAAATGTGAACAAAA 60.729 36.000 0.00 0.00 40.77 2.44
419 420 6.253746 CCGAATGCAAAAATGTGAACAAAAA 58.746 32.000 0.00 0.00 0.00 1.94
440 441 4.751767 AAAAACATTGAAGGCTTGTCCA 57.248 36.364 3.46 0.00 37.29 4.02
441 442 4.961438 AAAACATTGAAGGCTTGTCCAT 57.039 36.364 3.46 0.00 37.29 3.41
442 443 4.525912 AAACATTGAAGGCTTGTCCATC 57.474 40.909 3.46 0.00 37.29 3.51
443 444 2.086869 ACATTGAAGGCTTGTCCATCG 58.913 47.619 3.46 0.00 35.36 3.84
444 445 2.290260 ACATTGAAGGCTTGTCCATCGA 60.290 45.455 3.46 0.00 35.36 3.59
450 451 3.287867 AGGCTTGTCCATCGATCAAAT 57.712 42.857 0.00 0.00 37.29 2.32
460 461 1.040646 TCGATCAAATCCCCTCCTCG 58.959 55.000 0.00 0.00 0.00 4.63
464 465 1.153086 CAAATCCCCTCCTCGCCAG 60.153 63.158 0.00 0.00 0.00 4.85
504 509 4.471386 ACATGGAAGCTAGTGTTGTCCTAT 59.529 41.667 0.00 0.00 0.00 2.57
555 560 5.465390 CACAATACTCATACAATACACCCGG 59.535 44.000 0.00 0.00 0.00 5.73
558 563 2.433239 ACTCATACAATACACCCGGTCC 59.567 50.000 0.00 0.00 0.00 4.46
565 570 3.181458 ACAATACACCCGGTCCATACATC 60.181 47.826 0.00 0.00 0.00 3.06
590 595 2.158755 CCTGGTCTTTGGTCTCTTGTGT 60.159 50.000 0.00 0.00 0.00 3.72
674 679 3.381045 GGCTCCTTTTTCTTTTTGTCCG 58.619 45.455 0.00 0.00 0.00 4.79
821 827 1.265905 CCGAATGTTTTATAGGCGCCC 59.734 52.381 26.15 6.18 0.00 6.13
853 859 2.361610 AGTCCAAGGCCGCCATTG 60.362 61.111 13.15 12.59 0.00 2.82
897 910 2.675772 GTCCCAGGTCGGTCGTCT 60.676 66.667 0.00 0.00 0.00 4.18
898 911 2.360852 TCCCAGGTCGGTCGTCTC 60.361 66.667 0.00 0.00 0.00 3.36
899 912 2.361357 CCCAGGTCGGTCGTCTCT 60.361 66.667 0.00 0.00 0.00 3.10
907 926 1.677966 CGGTCGTCTCTCCCTCCAA 60.678 63.158 0.00 0.00 0.00 3.53
915 934 1.595993 CTCTCCCTCCAAAGCGACGA 61.596 60.000 0.00 0.00 0.00 4.20
916 935 1.153745 CTCCCTCCAAAGCGACGAG 60.154 63.158 0.00 0.00 0.00 4.18
944 963 1.741770 GCGCCGACTGGACAAGAAT 60.742 57.895 0.00 0.00 37.49 2.40
945 964 0.459585 GCGCCGACTGGACAAGAATA 60.460 55.000 0.00 0.00 37.49 1.75
946 965 1.278238 CGCCGACTGGACAAGAATAC 58.722 55.000 0.00 0.00 37.49 1.89
956 984 7.341445 ACTGGACAAGAATACTATGAGAGAC 57.659 40.000 0.00 0.00 0.00 3.36
1001 1031 0.755698 TATCCCGGTGAGGCAGAGAC 60.756 60.000 0.00 0.00 39.21 3.36
1002 1032 4.135153 CCCGGTGAGGCAGAGACG 62.135 72.222 0.00 0.00 39.21 4.18
1003 1033 3.374402 CCGGTGAGGCAGAGACGT 61.374 66.667 0.00 0.00 0.00 4.34
1038 1082 2.506444 GTGGTAGGAGATAGTCGGAGG 58.494 57.143 0.00 0.00 0.00 4.30
1329 1376 3.643978 GCAGGATCATGCGGACGC 61.644 66.667 17.52 10.13 36.28 5.19
1475 1534 3.458163 TCGCCATCCCGGAGTGAC 61.458 66.667 0.73 0.00 36.56 3.67
1485 1544 4.487412 GGAGTGACCCGCCGTACG 62.487 72.222 8.69 8.69 43.15 3.67
1486 1545 3.741476 GAGTGACCCGCCGTACGT 61.741 66.667 15.21 0.00 41.42 3.57
1594 1657 2.742372 CGAGTTGTTCCGGCCCTG 60.742 66.667 0.00 0.00 0.00 4.45
1637 1700 1.385528 TCGCGTAGAGGTTGATGCTA 58.614 50.000 5.77 0.00 0.00 3.49
1657 1720 1.228215 TGCTGTGGTGGTCCATGTG 60.228 57.895 0.00 0.00 46.20 3.21
1658 1721 1.228245 GCTGTGGTGGTCCATGTGT 60.228 57.895 0.00 0.00 46.20 3.72
1756 1821 5.408356 TGGAATAAGTTTGAGAGCGACTAC 58.592 41.667 0.00 0.00 0.00 2.73
1762 1827 0.165295 TTGAGAGCGACTACACGACG 59.835 55.000 0.00 0.00 35.09 5.12
1763 1828 0.668401 TGAGAGCGACTACACGACGA 60.668 55.000 0.00 0.00 32.56 4.20
1764 1829 0.247223 GAGAGCGACTACACGACGAC 60.247 60.000 0.00 0.00 32.56 4.34
1765 1830 0.947660 AGAGCGACTACACGACGACA 60.948 55.000 0.00 0.00 32.56 4.35
1766 1831 0.096628 GAGCGACTACACGACGACAT 59.903 55.000 0.00 0.00 32.56 3.06
1767 1832 0.179197 AGCGACTACACGACGACATG 60.179 55.000 0.00 0.00 32.56 3.21
1768 1833 1.132199 GCGACTACACGACGACATGG 61.132 60.000 0.00 0.00 32.56 3.66
1769 1834 0.445043 CGACTACACGACGACATGGA 59.555 55.000 0.00 0.00 32.56 3.41
1770 1835 1.063616 CGACTACACGACGACATGGAT 59.936 52.381 0.00 0.00 32.56 3.41
1771 1836 2.477357 CGACTACACGACGACATGGATT 60.477 50.000 0.00 0.00 32.56 3.01
1772 1837 2.852413 GACTACACGACGACATGGATTG 59.148 50.000 0.00 0.00 0.00 2.67
1773 1838 2.193447 CTACACGACGACATGGATTGG 58.807 52.381 0.00 0.00 0.00 3.16
1774 1839 0.320374 ACACGACGACATGGATTGGT 59.680 50.000 0.00 0.00 0.00 3.67
1775 1840 0.999406 CACGACGACATGGATTGGTC 59.001 55.000 0.00 0.00 0.00 4.02
1809 1874 3.777925 CGGTCGCTTTGCTGTCCG 61.778 66.667 0.00 0.00 31.77 4.79
1813 1878 2.434185 CGCTTTGCTGTCCGCCTA 60.434 61.111 0.00 0.00 38.05 3.93
1822 1887 0.249073 CTGTCCGCCTACCGATCTTG 60.249 60.000 0.00 0.00 40.02 3.02
1968 2034 4.032900 CGTTTGTATGTGCCTCATCTGTAC 59.967 45.833 0.00 0.00 37.91 2.90
2041 2109 1.295423 GAGAGCAGGCCAACGGTAA 59.705 57.895 5.01 0.00 0.00 2.85
2108 2176 0.171231 GGTGATTCGCCTTGGCTTTC 59.829 55.000 9.06 4.57 0.00 2.62
2109 2177 0.881118 GTGATTCGCCTTGGCTTTCA 59.119 50.000 10.12 6.95 0.00 2.69
2135 2208 1.017177 TCGAGGGATTTCAAACCGCG 61.017 55.000 0.00 0.00 46.67 6.46
2170 2243 0.595095 GTGACTTGCTTGGCTCCTTG 59.405 55.000 0.00 0.00 0.00 3.61
2173 2247 1.000938 GACTTGCTTGGCTCCTTGTTG 60.001 52.381 0.00 0.00 0.00 3.33
2267 2351 1.301479 GGGAACGGACGAACAAGCT 60.301 57.895 0.00 0.00 0.00 3.74
2268 2352 0.037975 GGGAACGGACGAACAAGCTA 60.038 55.000 0.00 0.00 0.00 3.32
2272 2356 2.349297 ACGGACGAACAAGCTAGAAG 57.651 50.000 0.00 0.00 0.00 2.85
2274 2358 2.816087 ACGGACGAACAAGCTAGAAGTA 59.184 45.455 0.00 0.00 0.00 2.24
2281 2365 5.163540 ACGAACAAGCTAGAAGTATGGGTAG 60.164 44.000 0.00 0.00 0.00 3.18
2282 2366 4.674281 ACAAGCTAGAAGTATGGGTAGC 57.326 45.455 0.00 0.00 38.56 3.58
2306 2390 4.022329 GTCTGTTTGGATTTGGTTCCGAAT 60.022 41.667 4.17 4.17 40.49 3.34
2308 2392 4.626042 TGTTTGGATTTGGTTCCGAATTG 58.374 39.130 5.86 0.00 40.49 2.32
2310 2394 2.883026 TGGATTTGGTTCCGAATTGGT 58.117 42.857 5.86 0.00 38.74 3.67
2311 2395 4.035612 TGGATTTGGTTCCGAATTGGTA 57.964 40.909 5.86 0.00 38.74 3.25
2333 2425 1.219393 CTTCGACTGCCCTTCTCCC 59.781 63.158 0.00 0.00 0.00 4.30
2337 2429 1.544825 CGACTGCCCTTCTCCCTGAA 61.545 60.000 0.00 0.00 0.00 3.02
2344 2436 1.257743 CCTTCTCCCTGAACGAGACA 58.742 55.000 0.00 0.00 36.11 3.41
2391 2483 7.080724 GTCTGTCTGGATCTCATTTTTGTTTC 58.919 38.462 0.00 0.00 0.00 2.78
2418 2510 7.759433 TCAAAAACAAAAAGACATGGACTTCTC 59.241 33.333 0.00 0.00 0.00 2.87
2446 2538 5.514500 TTTTTAGGGCTAGACATGGACTT 57.486 39.130 0.00 0.00 0.00 3.01
2447 2539 4.755266 TTTAGGGCTAGACATGGACTTC 57.245 45.455 0.00 0.00 0.00 3.01
2448 2540 2.559381 AGGGCTAGACATGGACTTCT 57.441 50.000 0.00 0.00 0.00 2.85
2449 2541 2.393646 AGGGCTAGACATGGACTTCTC 58.606 52.381 0.00 0.00 0.00 2.87
2450 2542 2.023501 AGGGCTAGACATGGACTTCTCT 60.024 50.000 0.00 0.00 0.00 3.10
2451 2543 2.769095 GGGCTAGACATGGACTTCTCTT 59.231 50.000 0.00 0.00 0.00 2.85
2452 2544 3.431486 GGGCTAGACATGGACTTCTCTTG 60.431 52.174 0.00 0.00 0.00 3.02
2453 2545 3.194062 GCTAGACATGGACTTCTCTTGC 58.806 50.000 0.00 0.00 0.00 4.01
2454 2546 3.118811 GCTAGACATGGACTTCTCTTGCT 60.119 47.826 0.00 0.00 31.36 3.91
2455 2547 3.608316 AGACATGGACTTCTCTTGCTC 57.392 47.619 0.00 0.00 0.00 4.26
2456 2548 2.094286 AGACATGGACTTCTCTTGCTCG 60.094 50.000 0.00 0.00 0.00 5.03
2457 2549 1.005340 CATGGACTTCTCTTGCTCGC 58.995 55.000 0.00 0.00 0.00 5.03
2458 2550 0.901124 ATGGACTTCTCTTGCTCGCT 59.099 50.000 0.00 0.00 0.00 4.93
2459 2551 0.681733 TGGACTTCTCTTGCTCGCTT 59.318 50.000 0.00 0.00 0.00 4.68
2460 2552 1.074752 GGACTTCTCTTGCTCGCTTG 58.925 55.000 0.00 0.00 0.00 4.01
2461 2553 1.606737 GGACTTCTCTTGCTCGCTTGT 60.607 52.381 0.00 0.00 0.00 3.16
2462 2554 2.139118 GACTTCTCTTGCTCGCTTGTT 58.861 47.619 0.00 0.00 0.00 2.83
2463 2555 2.545946 GACTTCTCTTGCTCGCTTGTTT 59.454 45.455 0.00 0.00 0.00 2.83
2464 2556 2.945668 ACTTCTCTTGCTCGCTTGTTTT 59.054 40.909 0.00 0.00 0.00 2.43
2465 2557 4.127171 ACTTCTCTTGCTCGCTTGTTTTA 58.873 39.130 0.00 0.00 0.00 1.52
2466 2558 4.212214 ACTTCTCTTGCTCGCTTGTTTTAG 59.788 41.667 0.00 0.00 0.00 1.85
2467 2559 3.990092 TCTCTTGCTCGCTTGTTTTAGA 58.010 40.909 0.00 0.00 0.00 2.10
2468 2560 3.990469 TCTCTTGCTCGCTTGTTTTAGAG 59.010 43.478 0.00 0.00 0.00 2.43
2473 2565 1.734465 CTCGCTTGTTTTAGAGCCAGG 59.266 52.381 0.00 0.00 35.49 4.45
2474 2566 1.346395 TCGCTTGTTTTAGAGCCAGGA 59.654 47.619 0.00 0.00 35.49 3.86
2475 2567 1.734465 CGCTTGTTTTAGAGCCAGGAG 59.266 52.381 0.00 0.00 35.49 3.69
2476 2568 1.470494 GCTTGTTTTAGAGCCAGGAGC 59.530 52.381 0.00 0.00 44.25 4.70
2486 2578 2.934083 GCCAGGAGCGGGAATATTC 58.066 57.895 6.93 6.93 0.00 1.75
2487 2579 0.606673 GCCAGGAGCGGGAATATTCC 60.607 60.000 24.14 24.14 46.82 3.01
2488 2580 1.059913 CCAGGAGCGGGAATATTCCT 58.940 55.000 29.24 13.64 46.72 3.36
2489 2581 1.002544 CCAGGAGCGGGAATATTCCTC 59.997 57.143 29.24 20.25 46.72 3.71
2490 2582 1.694150 CAGGAGCGGGAATATTCCTCA 59.306 52.381 29.24 0.00 46.72 3.86
2491 2583 2.304180 CAGGAGCGGGAATATTCCTCAT 59.696 50.000 29.24 16.72 46.72 2.90
2492 2584 2.569404 AGGAGCGGGAATATTCCTCATC 59.431 50.000 29.24 22.71 46.72 2.92
2493 2585 2.303022 GGAGCGGGAATATTCCTCATCA 59.697 50.000 29.24 0.00 46.72 3.07
2494 2586 3.244561 GGAGCGGGAATATTCCTCATCAA 60.245 47.826 29.24 0.00 46.72 2.57
2495 2587 4.389374 GAGCGGGAATATTCCTCATCAAA 58.611 43.478 29.24 0.00 46.72 2.69
2496 2588 4.392940 AGCGGGAATATTCCTCATCAAAG 58.607 43.478 29.24 13.86 46.72 2.77
2497 2589 3.057946 GCGGGAATATTCCTCATCAAAGC 60.058 47.826 29.24 18.25 46.72 3.51
2498 2590 3.503748 CGGGAATATTCCTCATCAAAGCC 59.496 47.826 29.24 11.16 46.72 4.35
2499 2591 3.829026 GGGAATATTCCTCATCAAAGCCC 59.171 47.826 29.24 9.19 46.72 5.19
2500 2592 4.473444 GGAATATTCCTCATCAAAGCCCA 58.527 43.478 24.74 0.00 44.11 5.36
2501 2593 4.895297 GGAATATTCCTCATCAAAGCCCAA 59.105 41.667 24.74 0.00 44.11 4.12
2502 2594 5.363580 GGAATATTCCTCATCAAAGCCCAAA 59.636 40.000 24.74 0.00 44.11 3.28
2503 2595 6.127083 GGAATATTCCTCATCAAAGCCCAAAA 60.127 38.462 24.74 0.00 44.11 2.44
2504 2596 4.813750 ATTCCTCATCAAAGCCCAAAAG 57.186 40.909 0.00 0.00 0.00 2.27
2505 2597 3.243359 TCCTCATCAAAGCCCAAAAGT 57.757 42.857 0.00 0.00 0.00 2.66
2506 2598 4.380843 TCCTCATCAAAGCCCAAAAGTA 57.619 40.909 0.00 0.00 0.00 2.24
2507 2599 4.735369 TCCTCATCAAAGCCCAAAAGTAA 58.265 39.130 0.00 0.00 0.00 2.24
2508 2600 5.144100 TCCTCATCAAAGCCCAAAAGTAAA 58.856 37.500 0.00 0.00 0.00 2.01
2509 2601 5.600484 TCCTCATCAAAGCCCAAAAGTAAAA 59.400 36.000 0.00 0.00 0.00 1.52
2510 2602 6.098982 TCCTCATCAAAGCCCAAAAGTAAAAA 59.901 34.615 0.00 0.00 0.00 1.94
2541 2633 7.780008 TCTTGAATTACAGAAAGAAACACGA 57.220 32.000 0.00 0.00 0.00 4.35
2542 2634 7.627340 TCTTGAATTACAGAAAGAAACACGAC 58.373 34.615 0.00 0.00 0.00 4.34
2543 2635 6.912203 TGAATTACAGAAAGAAACACGACA 57.088 33.333 0.00 0.00 0.00 4.35
2544 2636 7.310072 TGAATTACAGAAAGAAACACGACAA 57.690 32.000 0.00 0.00 0.00 3.18
2545 2637 7.753659 TGAATTACAGAAAGAAACACGACAAA 58.246 30.769 0.00 0.00 0.00 2.83
2546 2638 8.402472 TGAATTACAGAAAGAAACACGACAAAT 58.598 29.630 0.00 0.00 0.00 2.32
2547 2639 9.872757 GAATTACAGAAAGAAACACGACAAATA 57.127 29.630 0.00 0.00 0.00 1.40
2551 2643 8.389586 ACAGAAAGAAACACGACAAATAAAAC 57.610 30.769 0.00 0.00 0.00 2.43
2552 2644 8.024285 ACAGAAAGAAACACGACAAATAAAACA 58.976 29.630 0.00 0.00 0.00 2.83
2553 2645 8.855279 CAGAAAGAAACACGACAAATAAAACAA 58.145 29.630 0.00 0.00 0.00 2.83
2554 2646 8.856247 AGAAAGAAACACGACAAATAAAACAAC 58.144 29.630 0.00 0.00 0.00 3.32
2555 2647 8.522178 AAAGAAACACGACAAATAAAACAACA 57.478 26.923 0.00 0.00 0.00 3.33
2556 2648 8.522178 AAGAAACACGACAAATAAAACAACAA 57.478 26.923 0.00 0.00 0.00 2.83
2557 2649 8.522178 AGAAACACGACAAATAAAACAACAAA 57.478 26.923 0.00 0.00 0.00 2.83
2558 2650 8.979574 AGAAACACGACAAATAAAACAACAAAA 58.020 25.926 0.00 0.00 0.00 2.44
2559 2651 9.582223 GAAACACGACAAATAAAACAACAAAAA 57.418 25.926 0.00 0.00 0.00 1.94
2626 2718 6.735678 AACAACAACAAAATTCTGAAACCC 57.264 33.333 0.00 0.00 0.00 4.11
2627 2719 5.799213 ACAACAACAAAATTCTGAAACCCA 58.201 33.333 0.00 0.00 0.00 4.51
2628 2720 6.234177 ACAACAACAAAATTCTGAAACCCAA 58.766 32.000 0.00 0.00 0.00 4.12
2629 2721 6.712547 ACAACAACAAAATTCTGAAACCCAAA 59.287 30.769 0.00 0.00 0.00 3.28
2630 2722 7.229506 ACAACAACAAAATTCTGAAACCCAAAA 59.770 29.630 0.00 0.00 0.00 2.44
2631 2723 7.376435 ACAACAAAATTCTGAAACCCAAAAG 57.624 32.000 0.00 0.00 0.00 2.27
2632 2724 6.939730 ACAACAAAATTCTGAAACCCAAAAGT 59.060 30.769 0.00 0.00 0.00 2.66
2633 2725 8.097662 ACAACAAAATTCTGAAACCCAAAAGTA 58.902 29.630 0.00 0.00 0.00 2.24
2634 2726 8.940952 CAACAAAATTCTGAAACCCAAAAGTAA 58.059 29.630 0.00 0.00 0.00 2.24
2635 2727 9.508642 AACAAAATTCTGAAACCCAAAAGTAAA 57.491 25.926 0.00 0.00 0.00 2.01
2636 2728 9.508642 ACAAAATTCTGAAACCCAAAAGTAAAA 57.491 25.926 0.00 0.00 0.00 1.52
2676 2768 2.939460 AAAATACCGCATGCAGAACC 57.061 45.000 19.57 0.00 0.00 3.62
2677 2769 2.128771 AAATACCGCATGCAGAACCT 57.871 45.000 19.57 0.00 0.00 3.50
2678 2770 2.128771 AATACCGCATGCAGAACCTT 57.871 45.000 19.57 0.00 0.00 3.50
2679 2771 1.668419 ATACCGCATGCAGAACCTTC 58.332 50.000 19.57 0.00 0.00 3.46
2680 2772 0.613260 TACCGCATGCAGAACCTTCT 59.387 50.000 19.57 0.00 38.25 2.85
2681 2773 0.613260 ACCGCATGCAGAACCTTCTA 59.387 50.000 19.57 0.00 35.34 2.10
2682 2774 1.293924 CCGCATGCAGAACCTTCTAG 58.706 55.000 19.57 0.00 35.34 2.43
2683 2775 1.134699 CCGCATGCAGAACCTTCTAGA 60.135 52.381 19.57 0.00 35.34 2.43
2684 2776 2.621338 CGCATGCAGAACCTTCTAGAA 58.379 47.619 19.57 4.81 35.34 2.10
2685 2777 2.606725 CGCATGCAGAACCTTCTAGAAG 59.393 50.000 23.31 23.31 35.34 2.85
2697 2789 2.762535 TCTAGAAGGTCCCAAAAGCG 57.237 50.000 0.00 0.00 0.00 4.68
2698 2790 1.278127 TCTAGAAGGTCCCAAAAGCGG 59.722 52.381 0.00 0.00 0.00 5.52
2699 2791 1.278127 CTAGAAGGTCCCAAAAGCGGA 59.722 52.381 0.00 0.00 0.00 5.54
2700 2792 0.476771 AGAAGGTCCCAAAAGCGGAA 59.523 50.000 0.00 0.00 0.00 4.30
2701 2793 1.075536 AGAAGGTCCCAAAAGCGGAAT 59.924 47.619 0.00 0.00 0.00 3.01
2702 2794 2.307686 AGAAGGTCCCAAAAGCGGAATA 59.692 45.455 0.00 0.00 0.00 1.75
2703 2795 2.124277 AGGTCCCAAAAGCGGAATAC 57.876 50.000 0.00 0.00 0.00 1.89
2704 2796 1.633945 AGGTCCCAAAAGCGGAATACT 59.366 47.619 0.00 0.00 0.00 2.12
2705 2797 2.014857 GGTCCCAAAAGCGGAATACTC 58.985 52.381 0.00 0.00 0.00 2.59
2706 2798 2.617021 GGTCCCAAAAGCGGAATACTCA 60.617 50.000 0.00 0.00 0.00 3.41
2707 2799 2.418976 GTCCCAAAAGCGGAATACTCAC 59.581 50.000 0.00 0.00 0.00 3.51
2708 2800 1.743394 CCCAAAAGCGGAATACTCACC 59.257 52.381 0.00 0.00 0.00 4.02
2709 2801 2.618045 CCCAAAAGCGGAATACTCACCT 60.618 50.000 0.00 0.00 0.00 4.00
2710 2802 3.370103 CCCAAAAGCGGAATACTCACCTA 60.370 47.826 0.00 0.00 0.00 3.08
2711 2803 3.621715 CCAAAAGCGGAATACTCACCTAC 59.378 47.826 0.00 0.00 0.00 3.18
2712 2804 4.250464 CAAAAGCGGAATACTCACCTACA 58.750 43.478 0.00 0.00 0.00 2.74
2713 2805 3.802948 AAGCGGAATACTCACCTACAG 57.197 47.619 0.00 0.00 0.00 2.74
2714 2806 2.736347 AGCGGAATACTCACCTACAGT 58.264 47.619 0.00 0.00 0.00 3.55
2716 2808 2.810650 CGGAATACTCACCTACAGTGC 58.189 52.381 0.00 0.00 46.81 4.40
2717 2809 2.165641 CGGAATACTCACCTACAGTGCA 59.834 50.000 0.00 0.00 46.81 4.57
2718 2810 3.735208 CGGAATACTCACCTACAGTGCAG 60.735 52.174 0.00 0.00 46.81 4.41
2719 2811 3.195825 GGAATACTCACCTACAGTGCAGT 59.804 47.826 0.00 0.00 46.81 4.40
2720 2812 4.425520 GAATACTCACCTACAGTGCAGTC 58.574 47.826 0.00 0.00 46.81 3.51
2721 2813 2.002505 ACTCACCTACAGTGCAGTCT 57.997 50.000 0.00 0.00 46.81 3.24
2722 2814 1.889829 ACTCACCTACAGTGCAGTCTC 59.110 52.381 0.00 0.00 46.81 3.36
2723 2815 1.889170 CTCACCTACAGTGCAGTCTCA 59.111 52.381 0.00 0.00 46.81 3.27
2724 2816 2.297315 CTCACCTACAGTGCAGTCTCAA 59.703 50.000 0.00 0.00 46.81 3.02
2725 2817 2.698274 TCACCTACAGTGCAGTCTCAAA 59.302 45.455 0.00 0.00 46.81 2.69
2726 2818 3.324846 TCACCTACAGTGCAGTCTCAAAT 59.675 43.478 0.00 0.00 46.81 2.32
2727 2819 4.067896 CACCTACAGTGCAGTCTCAAATT 58.932 43.478 0.00 0.00 40.28 1.82
2728 2820 4.067896 ACCTACAGTGCAGTCTCAAATTG 58.932 43.478 0.00 0.00 0.00 2.32
2729 2821 3.438087 CCTACAGTGCAGTCTCAAATTGG 59.562 47.826 0.00 0.00 0.00 3.16
2730 2822 3.213206 ACAGTGCAGTCTCAAATTGGA 57.787 42.857 0.00 0.00 0.00 3.53
2731 2823 3.759581 ACAGTGCAGTCTCAAATTGGAT 58.240 40.909 0.00 0.00 0.00 3.41
2732 2824 4.910195 ACAGTGCAGTCTCAAATTGGATA 58.090 39.130 0.00 0.00 0.00 2.59
2733 2825 5.503927 ACAGTGCAGTCTCAAATTGGATAT 58.496 37.500 0.00 0.00 0.00 1.63
2734 2826 6.653020 ACAGTGCAGTCTCAAATTGGATATA 58.347 36.000 0.00 0.00 0.00 0.86
2735 2827 6.540189 ACAGTGCAGTCTCAAATTGGATATAC 59.460 38.462 0.00 0.00 0.00 1.47
2736 2828 5.755375 AGTGCAGTCTCAAATTGGATATACG 59.245 40.000 0.00 0.00 0.00 3.06
2737 2829 5.050091 GTGCAGTCTCAAATTGGATATACGG 60.050 44.000 0.00 0.00 0.00 4.02
2738 2830 4.452455 GCAGTCTCAAATTGGATATACGGG 59.548 45.833 0.00 0.00 0.00 5.28
2739 2831 4.452455 CAGTCTCAAATTGGATATACGGGC 59.548 45.833 0.00 0.00 0.00 6.13
2740 2832 3.432252 GTCTCAAATTGGATATACGGGCG 59.568 47.826 0.00 0.00 0.00 6.13
2741 2833 2.147958 TCAAATTGGATATACGGGCGC 58.852 47.619 0.00 0.00 0.00 6.53
2742 2834 2.151202 CAAATTGGATATACGGGCGCT 58.849 47.619 7.64 0.00 0.00 5.92
2743 2835 1.808411 AATTGGATATACGGGCGCTG 58.192 50.000 7.64 2.40 0.00 5.18
2744 2836 0.973632 ATTGGATATACGGGCGCTGA 59.026 50.000 7.64 0.00 0.00 4.26
2745 2837 0.973632 TTGGATATACGGGCGCTGAT 59.026 50.000 7.64 0.00 0.00 2.90
2746 2838 0.246360 TGGATATACGGGCGCTGATG 59.754 55.000 7.64 0.00 0.00 3.07
2747 2839 0.460284 GGATATACGGGCGCTGATGG 60.460 60.000 7.64 0.00 0.00 3.51
2748 2840 1.079127 ATATACGGGCGCTGATGGC 60.079 57.895 7.64 0.00 37.64 4.40
2749 2841 1.826340 ATATACGGGCGCTGATGGCA 61.826 55.000 7.64 0.00 41.91 4.92
2750 2842 1.826340 TATACGGGCGCTGATGGCAT 61.826 55.000 7.64 0.00 41.91 4.40
2751 2843 2.680974 ATACGGGCGCTGATGGCATT 62.681 55.000 7.64 0.00 41.91 3.56
2752 2844 2.884997 TACGGGCGCTGATGGCATTT 62.885 55.000 7.64 0.00 41.91 2.32
2753 2845 2.414594 GGGCGCTGATGGCATTTC 59.585 61.111 7.64 0.00 41.91 2.17
2754 2846 2.414594 GGCGCTGATGGCATTTCC 59.585 61.111 7.64 0.00 41.91 3.13
2755 2847 2.123428 GGCGCTGATGGCATTTCCT 61.123 57.895 7.64 0.00 41.91 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.793927 TCATGGTATATGTACGAAAAATGCA 57.206 32.000 0.00 0.00 0.00 3.96
129 130 8.989131 GGAGGGAGTATATATAAAATGTGCCTA 58.011 37.037 0.00 0.00 0.00 3.93
130 131 7.364762 CGGAGGGAGTATATATAAAATGTGCCT 60.365 40.741 0.00 0.00 0.00 4.75
131 132 6.761714 CGGAGGGAGTATATATAAAATGTGCC 59.238 42.308 0.00 0.00 0.00 5.01
132 133 7.328737 ACGGAGGGAGTATATATAAAATGTGC 58.671 38.462 0.00 0.00 0.00 4.57
133 134 9.798994 GTACGGAGGGAGTATATATAAAATGTG 57.201 37.037 0.00 0.00 0.00 3.21
134 135 8.975295 GGTACGGAGGGAGTATATATAAAATGT 58.025 37.037 0.00 0.00 0.00 2.71
135 136 8.974238 TGGTACGGAGGGAGTATATATAAAATG 58.026 37.037 0.00 0.00 0.00 2.32
136 137 9.551339 TTGGTACGGAGGGAGTATATATAAAAT 57.449 33.333 0.00 0.00 0.00 1.82
137 138 8.954834 TTGGTACGGAGGGAGTATATATAAAA 57.045 34.615 0.00 0.00 0.00 1.52
138 139 8.954834 TTTGGTACGGAGGGAGTATATATAAA 57.045 34.615 0.00 0.00 0.00 1.40
139 140 8.954834 TTTTGGTACGGAGGGAGTATATATAA 57.045 34.615 0.00 0.00 0.00 0.98
141 142 9.725206 ATATTTTGGTACGGAGGGAGTATATAT 57.275 33.333 0.00 0.00 0.00 0.86
143 144 9.551339 TTATATTTTGGTACGGAGGGAGTATAT 57.449 33.333 0.00 0.00 0.00 0.86
144 145 8.954834 TTATATTTTGGTACGGAGGGAGTATA 57.045 34.615 0.00 0.00 0.00 1.47
145 146 7.731688 TCTTATATTTTGGTACGGAGGGAGTAT 59.268 37.037 0.00 0.00 0.00 2.12
146 147 7.014615 GTCTTATATTTTGGTACGGAGGGAGTA 59.985 40.741 0.00 0.00 0.00 2.59
147 148 5.901276 TCTTATATTTTGGTACGGAGGGAGT 59.099 40.000 0.00 0.00 0.00 3.85
148 149 6.221659 GTCTTATATTTTGGTACGGAGGGAG 58.778 44.000 0.00 0.00 0.00 4.30
149 150 5.221303 CGTCTTATATTTTGGTACGGAGGGA 60.221 44.000 0.00 0.00 0.00 4.20
150 151 4.986659 CGTCTTATATTTTGGTACGGAGGG 59.013 45.833 0.00 0.00 0.00 4.30
151 152 5.594926 ACGTCTTATATTTTGGTACGGAGG 58.405 41.667 0.00 0.00 33.44 4.30
152 153 7.063780 ACAAACGTCTTATATTTTGGTACGGAG 59.936 37.037 0.00 0.00 33.98 4.63
153 154 6.873076 ACAAACGTCTTATATTTTGGTACGGA 59.127 34.615 0.00 0.00 33.98 4.69
154 155 6.957077 CACAAACGTCTTATATTTTGGTACGG 59.043 38.462 0.00 0.00 33.98 4.02
155 156 6.463576 GCACAAACGTCTTATATTTTGGTACG 59.536 38.462 0.00 0.00 33.98 3.67
156 157 7.299586 TGCACAAACGTCTTATATTTTGGTAC 58.700 34.615 0.00 0.00 33.98 3.34
157 158 7.173562 ACTGCACAAACGTCTTATATTTTGGTA 59.826 33.333 0.00 0.00 33.98 3.25
158 159 6.016610 ACTGCACAAACGTCTTATATTTTGGT 60.017 34.615 0.00 0.00 33.98 3.67
159 160 6.378582 ACTGCACAAACGTCTTATATTTTGG 58.621 36.000 0.00 0.00 33.98 3.28
160 161 7.851822 AACTGCACAAACGTCTTATATTTTG 57.148 32.000 0.00 0.00 35.49 2.44
161 162 8.132362 TCAAACTGCACAAACGTCTTATATTTT 58.868 29.630 0.00 0.00 0.00 1.82
162 163 7.644490 TCAAACTGCACAAACGTCTTATATTT 58.356 30.769 0.00 0.00 0.00 1.40
163 164 7.197071 TCAAACTGCACAAACGTCTTATATT 57.803 32.000 0.00 0.00 0.00 1.28
164 165 6.795098 TCAAACTGCACAAACGTCTTATAT 57.205 33.333 0.00 0.00 0.00 0.86
165 166 6.795098 ATCAAACTGCACAAACGTCTTATA 57.205 33.333 0.00 0.00 0.00 0.98
166 167 5.689383 ATCAAACTGCACAAACGTCTTAT 57.311 34.783 0.00 0.00 0.00 1.73
167 168 5.493133 AATCAAACTGCACAAACGTCTTA 57.507 34.783 0.00 0.00 0.00 2.10
168 169 4.370364 AATCAAACTGCACAAACGTCTT 57.630 36.364 0.00 0.00 0.00 3.01
169 170 4.104776 CAAATCAAACTGCACAAACGTCT 58.895 39.130 0.00 0.00 0.00 4.18
170 171 3.857093 ACAAATCAAACTGCACAAACGTC 59.143 39.130 0.00 0.00 0.00 4.34
171 172 3.843999 ACAAATCAAACTGCACAAACGT 58.156 36.364 0.00 0.00 0.00 3.99
172 173 5.034152 AGTACAAATCAAACTGCACAAACG 58.966 37.500 0.00 0.00 0.00 3.60
173 174 6.259743 CAGTACAAATCAAACTGCACAAAC 57.740 37.500 0.00 0.00 34.73 2.93
189 190 7.990541 AATATACGACGTATTTGCAGTACAA 57.009 32.000 24.36 4.21 36.13 2.41
190 191 7.990541 AAATATACGACGTATTTGCAGTACA 57.009 32.000 24.36 4.93 32.19 2.90
191 192 7.790673 CCAAAATATACGACGTATTTGCAGTAC 59.209 37.037 24.36 0.00 33.35 2.73
192 193 7.492020 ACCAAAATATACGACGTATTTGCAGTA 59.508 33.333 24.36 6.35 33.35 2.74
193 194 6.314400 ACCAAAATATACGACGTATTTGCAGT 59.686 34.615 24.36 14.35 33.35 4.40
194 195 6.711579 ACCAAAATATACGACGTATTTGCAG 58.288 36.000 24.36 13.83 33.35 4.41
195 196 6.665474 ACCAAAATATACGACGTATTTGCA 57.335 33.333 24.36 8.14 33.35 4.08
196 197 7.620215 TGTACCAAAATATACGACGTATTTGC 58.380 34.615 24.36 11.86 33.35 3.68
197 198 9.022915 TCTGTACCAAAATATACGACGTATTTG 57.977 33.333 24.36 21.14 33.35 2.32
198 199 9.241317 CTCTGTACCAAAATATACGACGTATTT 57.759 33.333 24.36 14.70 34.20 1.40
199 200 8.623903 TCTCTGTACCAAAATATACGACGTATT 58.376 33.333 24.36 7.96 30.79 1.89
200 201 8.158169 TCTCTGTACCAAAATATACGACGTAT 57.842 34.615 22.96 22.96 33.05 3.06
201 202 7.254898 CCTCTCTGTACCAAAATATACGACGTA 60.255 40.741 10.62 10.62 0.00 3.57
202 203 6.441093 TCTCTGTACCAAAATATACGACGT 57.559 37.500 5.52 5.52 0.00 4.34
203 204 5.913514 CCTCTCTGTACCAAAATATACGACG 59.086 44.000 0.00 0.00 0.00 5.12
204 205 6.803642 ACCTCTCTGTACCAAAATATACGAC 58.196 40.000 0.00 0.00 0.00 4.34
205 206 7.776969 ACTACCTCTCTGTACCAAAATATACGA 59.223 37.037 0.00 0.00 0.00 3.43
206 207 7.938715 ACTACCTCTCTGTACCAAAATATACG 58.061 38.462 0.00 0.00 0.00 3.06
208 209 9.925545 TGTACTACCTCTCTGTACCAAAATATA 57.074 33.333 0.00 0.00 36.63 0.86
209 210 8.834004 TGTACTACCTCTCTGTACCAAAATAT 57.166 34.615 0.00 0.00 36.63 1.28
210 211 8.692710 CATGTACTACCTCTCTGTACCAAAATA 58.307 37.037 0.00 0.00 36.63 1.40
211 212 7.180408 ACATGTACTACCTCTCTGTACCAAAAT 59.820 37.037 0.00 0.00 36.63 1.82
212 213 6.495872 ACATGTACTACCTCTCTGTACCAAAA 59.504 38.462 0.00 0.00 36.63 2.44
213 214 6.014647 ACATGTACTACCTCTCTGTACCAAA 58.985 40.000 0.00 0.00 36.63 3.28
214 215 5.577100 ACATGTACTACCTCTCTGTACCAA 58.423 41.667 0.00 0.00 36.63 3.67
215 216 5.188988 ACATGTACTACCTCTCTGTACCA 57.811 43.478 0.00 0.00 36.63 3.25
216 217 6.527057 AAACATGTACTACCTCTCTGTACC 57.473 41.667 0.00 0.00 36.63 3.34
219 220 9.036980 AGAATTAAACATGTACTACCTCTCTGT 57.963 33.333 0.00 0.00 0.00 3.41
220 221 9.877178 AAGAATTAAACATGTACTACCTCTCTG 57.123 33.333 0.00 0.00 0.00 3.35
267 268 9.814507 GTTAAACGTGTATACACAAATGAATCA 57.185 29.630 30.17 6.88 46.75 2.57
268 269 9.814507 TGTTAAACGTGTATACACAAATGAATC 57.185 29.630 30.17 15.66 46.75 2.52
281 282 9.057365 CGCATTAGAAAAATGTTAAACGTGTAT 57.943 29.630 0.00 0.00 0.00 2.29
282 283 7.059716 GCGCATTAGAAAAATGTTAAACGTGTA 59.940 33.333 0.30 0.00 0.00 2.90
283 284 6.129300 GCGCATTAGAAAAATGTTAAACGTGT 60.129 34.615 0.30 0.00 0.00 4.49
284 285 6.223589 GCGCATTAGAAAAATGTTAAACGTG 58.776 36.000 0.30 0.00 0.00 4.49
285 286 5.058734 CGCGCATTAGAAAAATGTTAAACGT 59.941 36.000 8.75 0.00 0.00 3.99
286 287 5.281842 TCGCGCATTAGAAAAATGTTAAACG 59.718 36.000 8.75 0.00 0.00 3.60
287 288 6.605496 TCGCGCATTAGAAAAATGTTAAAC 57.395 33.333 8.75 0.00 0.00 2.01
288 289 7.661859 CAATCGCGCATTAGAAAAATGTTAAA 58.338 30.769 8.75 0.00 0.00 1.52
289 290 6.237437 GCAATCGCGCATTAGAAAAATGTTAA 60.237 34.615 8.75 0.00 0.00 2.01
290 291 5.229052 GCAATCGCGCATTAGAAAAATGTTA 59.771 36.000 8.75 0.00 0.00 2.41
291 292 4.031652 GCAATCGCGCATTAGAAAAATGTT 59.968 37.500 8.75 0.00 0.00 2.71
292 293 3.547468 GCAATCGCGCATTAGAAAAATGT 59.453 39.130 8.75 0.00 0.00 2.71
293 294 3.792956 AGCAATCGCGCATTAGAAAAATG 59.207 39.130 8.75 0.00 45.49 2.32
294 295 4.032703 AGCAATCGCGCATTAGAAAAAT 57.967 36.364 8.75 0.00 45.49 1.82
295 296 3.485947 AGCAATCGCGCATTAGAAAAA 57.514 38.095 8.75 0.00 45.49 1.94
296 297 3.485947 AAGCAATCGCGCATTAGAAAA 57.514 38.095 8.75 0.00 45.49 2.29
297 298 3.485947 AAAGCAATCGCGCATTAGAAA 57.514 38.095 8.75 0.00 45.49 2.52
298 299 3.485947 AAAAGCAATCGCGCATTAGAA 57.514 38.095 8.75 0.00 45.49 2.10
299 300 3.120025 TGAAAAAGCAATCGCGCATTAGA 60.120 39.130 8.75 0.00 45.49 2.10
300 301 3.170505 TGAAAAAGCAATCGCGCATTAG 58.829 40.909 8.75 0.00 45.49 1.73
301 302 3.170505 CTGAAAAAGCAATCGCGCATTA 58.829 40.909 8.75 0.00 45.49 1.90
302 303 1.987770 CTGAAAAAGCAATCGCGCATT 59.012 42.857 8.75 3.54 45.49 3.56
303 304 1.621107 CTGAAAAAGCAATCGCGCAT 58.379 45.000 8.75 0.00 45.49 4.73
304 305 0.387112 CCTGAAAAAGCAATCGCGCA 60.387 50.000 8.75 0.00 45.49 6.09
305 306 0.387239 ACCTGAAAAAGCAATCGCGC 60.387 50.000 0.00 0.00 45.49 6.86
306 307 2.050477 AACCTGAAAAAGCAATCGCG 57.950 45.000 0.00 0.00 45.49 5.87
307 308 3.555547 ACAAAACCTGAAAAAGCAATCGC 59.444 39.130 0.00 0.00 38.99 4.58
308 309 8.687824 ATATACAAAACCTGAAAAAGCAATCG 57.312 30.769 0.00 0.00 0.00 3.34
340 341 9.996554 TGTGTTTCGGTTGAATATATCTATCAT 57.003 29.630 0.00 0.00 33.20 2.45
341 342 9.825109 TTGTGTTTCGGTTGAATATATCTATCA 57.175 29.630 0.00 0.00 33.20 2.15
343 344 8.774586 GCTTGTGTTTCGGTTGAATATATCTAT 58.225 33.333 0.00 0.00 33.20 1.98
344 345 7.766738 TGCTTGTGTTTCGGTTGAATATATCTA 59.233 33.333 0.00 0.00 33.20 1.98
345 346 6.597672 TGCTTGTGTTTCGGTTGAATATATCT 59.402 34.615 0.00 0.00 33.20 1.98
346 347 6.781138 TGCTTGTGTTTCGGTTGAATATATC 58.219 36.000 0.00 0.00 33.20 1.63
347 348 6.751514 TGCTTGTGTTTCGGTTGAATATAT 57.248 33.333 0.00 0.00 33.20 0.86
348 349 6.561737 TTGCTTGTGTTTCGGTTGAATATA 57.438 33.333 0.00 0.00 33.20 0.86
349 350 5.446143 TTGCTTGTGTTTCGGTTGAATAT 57.554 34.783 0.00 0.00 33.20 1.28
350 351 4.902443 TTGCTTGTGTTTCGGTTGAATA 57.098 36.364 0.00 0.00 33.20 1.75
351 352 3.791973 TTGCTTGTGTTTCGGTTGAAT 57.208 38.095 0.00 0.00 33.20 2.57
352 353 3.506810 CTTTGCTTGTGTTTCGGTTGAA 58.493 40.909 0.00 0.00 0.00 2.69
353 354 2.733858 GCTTTGCTTGTGTTTCGGTTGA 60.734 45.455 0.00 0.00 0.00 3.18
354 355 1.587946 GCTTTGCTTGTGTTTCGGTTG 59.412 47.619 0.00 0.00 0.00 3.77
355 356 1.476488 AGCTTTGCTTGTGTTTCGGTT 59.524 42.857 0.00 0.00 33.89 4.44
356 357 1.102978 AGCTTTGCTTGTGTTTCGGT 58.897 45.000 0.00 0.00 33.89 4.69
357 358 3.347958 TTAGCTTTGCTTGTGTTTCGG 57.652 42.857 0.00 0.00 40.44 4.30
358 359 5.458452 TCATTTTAGCTTTGCTTGTGTTTCG 59.542 36.000 0.00 0.00 40.44 3.46
359 360 6.826893 TCATTTTAGCTTTGCTTGTGTTTC 57.173 33.333 0.00 0.00 40.44 2.78
360 361 8.885494 TTATCATTTTAGCTTTGCTTGTGTTT 57.115 26.923 0.00 0.00 40.44 2.83
361 362 8.885494 TTTATCATTTTAGCTTTGCTTGTGTT 57.115 26.923 0.00 0.00 40.44 3.32
362 363 8.885494 TTTTATCATTTTAGCTTTGCTTGTGT 57.115 26.923 0.00 0.00 40.44 3.72
363 364 9.584839 GTTTTTATCATTTTAGCTTTGCTTGTG 57.415 29.630 0.00 0.00 40.44 3.33
364 365 9.323985 TGTTTTTATCATTTTAGCTTTGCTTGT 57.676 25.926 0.00 0.00 40.44 3.16
368 369 9.091255 CGTTTGTTTTTATCATTTTAGCTTTGC 57.909 29.630 0.00 0.00 0.00 3.68
369 370 9.091255 GCGTTTGTTTTTATCATTTTAGCTTTG 57.909 29.630 0.00 0.00 0.00 2.77
370 371 8.279800 GGCGTTTGTTTTTATCATTTTAGCTTT 58.720 29.630 0.00 0.00 0.00 3.51
371 372 7.358848 CGGCGTTTGTTTTTATCATTTTAGCTT 60.359 33.333 0.00 0.00 0.00 3.74
372 373 6.088883 CGGCGTTTGTTTTTATCATTTTAGCT 59.911 34.615 0.00 0.00 0.00 3.32
373 374 6.088350 TCGGCGTTTGTTTTTATCATTTTAGC 59.912 34.615 6.85 0.00 0.00 3.09
374 375 7.555639 TCGGCGTTTGTTTTTATCATTTTAG 57.444 32.000 6.85 0.00 0.00 1.85
375 376 7.925703 TTCGGCGTTTGTTTTTATCATTTTA 57.074 28.000 6.85 0.00 0.00 1.52
376 377 6.830114 TTCGGCGTTTGTTTTTATCATTTT 57.170 29.167 6.85 0.00 0.00 1.82
377 378 6.617529 GCATTCGGCGTTTGTTTTTATCATTT 60.618 34.615 6.85 0.00 0.00 2.32
378 379 5.164002 GCATTCGGCGTTTGTTTTTATCATT 60.164 36.000 6.85 0.00 0.00 2.57
379 380 4.326009 GCATTCGGCGTTTGTTTTTATCAT 59.674 37.500 6.85 0.00 0.00 2.45
380 381 3.670991 GCATTCGGCGTTTGTTTTTATCA 59.329 39.130 6.85 0.00 0.00 2.15
381 382 4.225815 GCATTCGGCGTTTGTTTTTATC 57.774 40.909 6.85 0.00 0.00 1.75
394 395 2.799412 TGTTCACATTTTTGCATTCGGC 59.201 40.909 0.00 0.00 45.13 5.54
395 396 5.401033 TTTGTTCACATTTTTGCATTCGG 57.599 34.783 0.00 0.00 0.00 4.30
419 420 4.751767 TGGACAAGCCTTCAATGTTTTT 57.248 36.364 0.00 0.00 37.63 1.94
420 421 4.559300 CGATGGACAAGCCTTCAATGTTTT 60.559 41.667 0.00 0.00 40.06 2.43
421 422 3.057315 CGATGGACAAGCCTTCAATGTTT 60.057 43.478 0.00 0.00 40.06 2.83
422 423 2.489329 CGATGGACAAGCCTTCAATGTT 59.511 45.455 0.00 0.00 40.06 2.71
423 424 2.086869 CGATGGACAAGCCTTCAATGT 58.913 47.619 0.00 0.00 40.06 2.71
424 425 2.358957 TCGATGGACAAGCCTTCAATG 58.641 47.619 0.00 0.00 40.06 2.82
425 426 2.787473 TCGATGGACAAGCCTTCAAT 57.213 45.000 0.00 0.00 40.06 2.57
426 427 2.027285 TGATCGATGGACAAGCCTTCAA 60.027 45.455 0.54 0.00 40.06 2.69
427 428 1.554617 TGATCGATGGACAAGCCTTCA 59.445 47.619 0.54 0.00 40.06 3.02
428 429 2.315925 TGATCGATGGACAAGCCTTC 57.684 50.000 0.54 0.00 37.45 3.46
429 430 2.787473 TTGATCGATGGACAAGCCTT 57.213 45.000 0.54 0.00 37.63 4.35
430 431 2.787473 TTTGATCGATGGACAAGCCT 57.213 45.000 0.54 0.00 37.63 4.58
431 432 2.291741 GGATTTGATCGATGGACAAGCC 59.708 50.000 0.54 3.39 37.10 4.35
432 433 2.291741 GGGATTTGATCGATGGACAAGC 59.708 50.000 0.54 0.00 0.00 4.01
433 434 2.880890 GGGGATTTGATCGATGGACAAG 59.119 50.000 0.54 0.00 0.00 3.16
434 435 2.509548 AGGGGATTTGATCGATGGACAA 59.490 45.455 0.54 0.00 0.00 3.18
435 436 2.104792 GAGGGGATTTGATCGATGGACA 59.895 50.000 0.54 0.00 0.00 4.02
436 437 2.551071 GGAGGGGATTTGATCGATGGAC 60.551 54.545 0.54 0.00 0.00 4.02
437 438 1.699634 GGAGGGGATTTGATCGATGGA 59.300 52.381 0.54 0.00 0.00 3.41
438 439 1.701847 AGGAGGGGATTTGATCGATGG 59.298 52.381 0.54 0.00 0.00 3.51
439 440 2.611473 CGAGGAGGGGATTTGATCGATG 60.611 54.545 0.54 0.00 0.00 3.84
440 441 1.620819 CGAGGAGGGGATTTGATCGAT 59.379 52.381 0.00 0.00 0.00 3.59
441 442 1.040646 CGAGGAGGGGATTTGATCGA 58.959 55.000 0.00 0.00 0.00 3.59
442 443 0.601311 GCGAGGAGGGGATTTGATCG 60.601 60.000 0.00 0.00 0.00 3.69
443 444 0.250510 GGCGAGGAGGGGATTTGATC 60.251 60.000 0.00 0.00 0.00 2.92
444 445 0.988145 TGGCGAGGAGGGGATTTGAT 60.988 55.000 0.00 0.00 0.00 2.57
460 461 6.346477 TGTGTGTAGATAGATTATCCTGGC 57.654 41.667 0.00 0.00 35.79 4.85
464 465 7.547370 GCTTCCATGTGTGTAGATAGATTATCC 59.453 40.741 0.00 0.00 35.79 2.59
504 509 1.485066 GCCTTCGGATCCCAGTTAGAA 59.515 52.381 6.06 1.68 0.00 2.10
528 533 6.238374 GGGTGTATTGTATGAGTATTGTGTGC 60.238 42.308 0.00 0.00 0.00 4.57
555 560 2.501723 AGACCAGGTGTGATGTATGGAC 59.498 50.000 0.00 0.00 34.99 4.02
558 563 3.691118 CCAAAGACCAGGTGTGATGTATG 59.309 47.826 0.00 0.00 0.00 2.39
565 570 1.417890 AGAGACCAAAGACCAGGTGTG 59.582 52.381 0.00 0.00 38.50 3.82
648 653 1.617322 AAAGAAAAAGGAGCCCCGAC 58.383 50.000 0.00 0.00 37.58 4.79
650 655 2.102420 ACAAAAAGAAAAAGGAGCCCCG 59.898 45.455 0.00 0.00 37.58 5.73
743 748 2.680841 AGTTGTTTTGCTTACGTGCTCA 59.319 40.909 0.00 0.00 0.00 4.26
821 827 1.305201 GGACTGGACTCGCTCTCTAG 58.695 60.000 0.00 0.00 0.00 2.43
897 910 1.595993 CTCGTCGCTTTGGAGGGAGA 61.596 60.000 0.00 0.00 44.42 3.71
898 911 1.153745 CTCGTCGCTTTGGAGGGAG 60.154 63.158 0.00 0.00 44.42 4.30
899 912 2.970639 CTCGTCGCTTTGGAGGGA 59.029 61.111 0.00 0.00 41.96 4.20
931 950 7.284489 AGTCTCTCATAGTATTCTTGTCCAGTC 59.716 40.741 0.00 0.00 0.00 3.51
934 953 7.119387 TCAGTCTCTCATAGTATTCTTGTCCA 58.881 38.462 0.00 0.00 0.00 4.02
945 964 9.333961 ACTATATACCTCTCAGTCTCTCATAGT 57.666 37.037 0.00 0.00 0.00 2.12
946 965 9.817809 GACTATATACCTCTCAGTCTCTCATAG 57.182 40.741 0.00 0.00 34.21 2.23
956 984 3.933955 CCGTCGGACTATATACCTCTCAG 59.066 52.174 4.91 0.00 0.00 3.35
970 998 2.342648 GGGATATGGCCGTCGGAC 59.657 66.667 17.49 14.47 0.00 4.79
990 1020 1.555533 TCTCTCTACGTCTCTGCCTCA 59.444 52.381 0.00 0.00 0.00 3.86
1001 1031 1.153127 ACCGCTCCCTCTCTCTACG 60.153 63.158 0.00 0.00 0.00 3.51
1002 1032 1.104577 CCACCGCTCCCTCTCTCTAC 61.105 65.000 0.00 0.00 0.00 2.59
1003 1033 1.227664 CCACCGCTCCCTCTCTCTA 59.772 63.158 0.00 0.00 0.00 2.43
1475 1534 4.918129 CGATGGACGTACGGCGGG 62.918 72.222 21.06 2.44 46.52 6.13
1518 1577 2.438434 CAGCCGGATTCCACCACC 60.438 66.667 5.05 0.00 0.00 4.61
1519 1578 3.134127 GCAGCCGGATTCCACCAC 61.134 66.667 5.05 0.00 0.00 4.16
1520 1579 4.424711 GGCAGCCGGATTCCACCA 62.425 66.667 5.05 0.00 0.00 4.17
1521 1580 3.721370 ATGGCAGCCGGATTCCACC 62.721 63.158 14.85 1.57 0.00 4.61
1594 1657 2.119457 CAGCAAGAAACGAACAAAGGC 58.881 47.619 0.00 0.00 0.00 4.35
1657 1720 3.374058 AGTTATGTGCCAACATCGCTAAC 59.626 43.478 0.00 0.00 43.85 2.34
1658 1721 3.605634 AGTTATGTGCCAACATCGCTAA 58.394 40.909 0.00 0.00 43.85 3.09
1756 1821 0.999406 GACCAATCCATGTCGTCGTG 59.001 55.000 0.00 0.00 0.00 4.35
1781 1846 1.666011 AGCGACCGAGCTCAAAGAA 59.334 52.632 15.40 0.00 45.67 2.52
1790 1855 2.383527 GGACAGCAAAGCGACCGAG 61.384 63.158 0.00 0.00 0.00 4.63
1809 1874 2.494073 CCTAGGATCAAGATCGGTAGGC 59.506 54.545 17.39 0.91 37.87 3.93
1813 1878 1.133009 AGCCCTAGGATCAAGATCGGT 60.133 52.381 11.48 0.00 38.69 4.69
1846 1911 1.141858 GCAAGGTATGGAAGAGGAGGG 59.858 57.143 0.00 0.00 0.00 4.30
1953 2019 3.769739 AACTTGTACAGATGAGGCACA 57.230 42.857 0.00 0.00 0.00 4.57
1968 2034 5.347342 TCACATACAAACCTGCAAAACTTG 58.653 37.500 0.00 0.00 0.00 3.16
2026 2094 0.960364 CACATTACCGTTGGCCTGCT 60.960 55.000 3.32 0.00 0.00 4.24
2041 2109 3.494378 GCGAGCTGCACATCACAT 58.506 55.556 1.02 0.00 45.45 3.21
2108 2176 1.312815 GAAATCCCTCGAGCCCATTG 58.687 55.000 6.99 0.00 0.00 2.82
2109 2177 0.918983 TGAAATCCCTCGAGCCCATT 59.081 50.000 6.99 1.38 0.00 3.16
2135 2208 5.107875 GCAAGTCACATCGTTTTTCAAATCC 60.108 40.000 0.00 0.00 0.00 3.01
2241 2325 1.373246 CGTCCGTTCCCGTGCTAAA 60.373 57.895 0.00 0.00 0.00 1.85
2242 2326 1.804396 TTCGTCCGTTCCCGTGCTAA 61.804 55.000 0.00 0.00 0.00 3.09
2249 2333 0.037975 TAGCTTGTTCGTCCGTTCCC 60.038 55.000 0.00 0.00 0.00 3.97
2250 2334 1.068055 TCTAGCTTGTTCGTCCGTTCC 60.068 52.381 0.00 0.00 0.00 3.62
2257 2341 3.514309 ACCCATACTTCTAGCTTGTTCGT 59.486 43.478 0.00 0.00 0.00 3.85
2267 2351 3.894759 ACAGACGCTACCCATACTTCTA 58.105 45.455 0.00 0.00 0.00 2.10
2268 2352 2.736347 ACAGACGCTACCCATACTTCT 58.264 47.619 0.00 0.00 0.00 2.85
2272 2356 2.093869 TCCAAACAGACGCTACCCATAC 60.094 50.000 0.00 0.00 0.00 2.39
2274 2358 0.981183 TCCAAACAGACGCTACCCAT 59.019 50.000 0.00 0.00 0.00 4.00
2281 2365 2.607038 GGAACCAAATCCAAACAGACGC 60.607 50.000 0.00 0.00 39.42 5.19
2282 2366 2.350388 CGGAACCAAATCCAAACAGACG 60.350 50.000 0.00 0.00 39.61 4.18
2306 2390 0.246635 GGCAGTCGAAGCTCTACCAA 59.753 55.000 10.48 0.00 0.00 3.67
2308 2392 1.142097 GGGCAGTCGAAGCTCTACC 59.858 63.158 10.48 0.00 0.00 3.18
2310 2394 0.818296 GAAGGGCAGTCGAAGCTCTA 59.182 55.000 13.30 0.00 43.32 2.43
2311 2395 0.902516 AGAAGGGCAGTCGAAGCTCT 60.903 55.000 7.64 7.64 46.87 4.09
2333 2425 5.472822 CGAAATCGTAATTGTCTCGTTCAG 58.527 41.667 0.00 0.00 34.11 3.02
2337 2429 3.855950 GTCCGAAATCGTAATTGTCTCGT 59.144 43.478 1.79 0.00 37.74 4.18
2344 2436 6.532657 AGACGTAATTGTCCGAAATCGTAATT 59.467 34.615 1.79 8.14 39.77 1.40
2391 2483 7.761249 AGAAGTCCATGTCTTTTTGTTTTTGAG 59.239 33.333 0.00 0.00 0.00 3.02
2397 2489 7.410120 AAAGAGAAGTCCATGTCTTTTTGTT 57.590 32.000 1.92 0.00 39.17 2.83
2424 2516 5.250774 AGAAGTCCATGTCTAGCCCTAAAAA 59.749 40.000 0.00 0.00 0.00 1.94
2425 2517 4.783227 AGAAGTCCATGTCTAGCCCTAAAA 59.217 41.667 0.00 0.00 0.00 1.52
2426 2518 4.362677 AGAAGTCCATGTCTAGCCCTAAA 58.637 43.478 0.00 0.00 0.00 1.85
2427 2519 3.961408 GAGAAGTCCATGTCTAGCCCTAA 59.039 47.826 0.00 0.00 0.00 2.69
2428 2520 3.205507 AGAGAAGTCCATGTCTAGCCCTA 59.794 47.826 0.00 0.00 0.00 3.53
2429 2521 2.023501 AGAGAAGTCCATGTCTAGCCCT 60.024 50.000 0.00 0.00 0.00 5.19
2430 2522 2.393646 AGAGAAGTCCATGTCTAGCCC 58.606 52.381 0.00 0.00 0.00 5.19
2431 2523 3.791245 CAAGAGAAGTCCATGTCTAGCC 58.209 50.000 0.00 0.00 0.00 3.93
2432 2524 3.118811 AGCAAGAGAAGTCCATGTCTAGC 60.119 47.826 0.00 0.00 0.00 3.42
2433 2525 4.681744 GAGCAAGAGAAGTCCATGTCTAG 58.318 47.826 0.00 0.00 0.00 2.43
2434 2526 3.129462 CGAGCAAGAGAAGTCCATGTCTA 59.871 47.826 0.00 0.00 0.00 2.59
2435 2527 2.094286 CGAGCAAGAGAAGTCCATGTCT 60.094 50.000 0.00 0.00 0.00 3.41
2436 2528 2.266554 CGAGCAAGAGAAGTCCATGTC 58.733 52.381 0.00 0.00 0.00 3.06
2437 2529 1.674221 GCGAGCAAGAGAAGTCCATGT 60.674 52.381 0.00 0.00 0.00 3.21
2438 2530 1.005340 GCGAGCAAGAGAAGTCCATG 58.995 55.000 0.00 0.00 0.00 3.66
2439 2531 0.901124 AGCGAGCAAGAGAAGTCCAT 59.099 50.000 0.00 0.00 0.00 3.41
2440 2532 0.681733 AAGCGAGCAAGAGAAGTCCA 59.318 50.000 0.00 0.00 0.00 4.02
2441 2533 1.074752 CAAGCGAGCAAGAGAAGTCC 58.925 55.000 0.00 0.00 0.00 3.85
2442 2534 1.789506 ACAAGCGAGCAAGAGAAGTC 58.210 50.000 0.00 0.00 0.00 3.01
2443 2535 2.246719 AACAAGCGAGCAAGAGAAGT 57.753 45.000 0.00 0.00 0.00 3.01
2444 2536 3.615849 AAAACAAGCGAGCAAGAGAAG 57.384 42.857 0.00 0.00 0.00 2.85
2445 2537 4.377021 TCTAAAACAAGCGAGCAAGAGAA 58.623 39.130 0.00 0.00 0.00 2.87
2446 2538 3.990092 TCTAAAACAAGCGAGCAAGAGA 58.010 40.909 0.00 0.00 0.00 3.10
2447 2539 3.424170 GCTCTAAAACAAGCGAGCAAGAG 60.424 47.826 5.34 0.00 46.06 2.85
2448 2540 2.480419 GCTCTAAAACAAGCGAGCAAGA 59.520 45.455 5.34 0.00 46.06 3.02
2449 2541 2.844281 GCTCTAAAACAAGCGAGCAAG 58.156 47.619 5.34 0.00 46.06 4.01
2450 2542 2.969443 GCTCTAAAACAAGCGAGCAA 57.031 45.000 5.34 0.00 46.06 3.91
2452 2544 1.129437 CTGGCTCTAAAACAAGCGAGC 59.871 52.381 0.00 0.00 46.06 5.03
2453 2545 1.734465 CCTGGCTCTAAAACAAGCGAG 59.266 52.381 0.00 0.00 42.11 5.03
2454 2546 1.346395 TCCTGGCTCTAAAACAAGCGA 59.654 47.619 0.00 0.00 39.47 4.93
2455 2547 1.734465 CTCCTGGCTCTAAAACAAGCG 59.266 52.381 0.00 0.00 39.47 4.68
2456 2548 1.470494 GCTCCTGGCTCTAAAACAAGC 59.530 52.381 0.00 0.00 38.06 4.01
2457 2549 1.734465 CGCTCCTGGCTCTAAAACAAG 59.266 52.381 0.00 0.00 39.13 3.16
2458 2550 1.610624 CCGCTCCTGGCTCTAAAACAA 60.611 52.381 0.00 0.00 39.13 2.83
2459 2551 0.036388 CCGCTCCTGGCTCTAAAACA 60.036 55.000 0.00 0.00 39.13 2.83
2460 2552 0.744771 CCCGCTCCTGGCTCTAAAAC 60.745 60.000 0.00 0.00 39.13 2.43
2461 2553 0.907704 TCCCGCTCCTGGCTCTAAAA 60.908 55.000 0.00 0.00 39.13 1.52
2462 2554 0.907704 TTCCCGCTCCTGGCTCTAAA 60.908 55.000 0.00 0.00 39.13 1.85
2463 2555 0.691078 ATTCCCGCTCCTGGCTCTAA 60.691 55.000 0.00 0.00 39.13 2.10
2464 2556 0.187606 TATTCCCGCTCCTGGCTCTA 59.812 55.000 0.00 0.00 39.13 2.43
2465 2557 0.472734 ATATTCCCGCTCCTGGCTCT 60.473 55.000 0.00 0.00 39.13 4.09
2466 2558 0.398318 AATATTCCCGCTCCTGGCTC 59.602 55.000 0.00 0.00 39.13 4.70
2467 2559 0.398318 GAATATTCCCGCTCCTGGCT 59.602 55.000 3.92 0.00 39.13 4.75
2468 2560 0.606673 GGAATATTCCCGCTCCTGGC 60.607 60.000 22.09 0.00 41.62 4.85
2469 2561 3.633361 GGAATATTCCCGCTCCTGG 57.367 57.895 22.09 0.00 41.62 4.45
2479 2571 6.469782 TTTGGGCTTTGATGAGGAATATTC 57.530 37.500 6.93 6.93 0.00 1.75
2480 2572 6.441604 ACTTTTGGGCTTTGATGAGGAATATT 59.558 34.615 0.00 0.00 0.00 1.28
2481 2573 5.960202 ACTTTTGGGCTTTGATGAGGAATAT 59.040 36.000 0.00 0.00 0.00 1.28
2482 2574 5.332743 ACTTTTGGGCTTTGATGAGGAATA 58.667 37.500 0.00 0.00 0.00 1.75
2483 2575 4.162651 ACTTTTGGGCTTTGATGAGGAAT 58.837 39.130 0.00 0.00 0.00 3.01
2484 2576 3.575805 ACTTTTGGGCTTTGATGAGGAA 58.424 40.909 0.00 0.00 0.00 3.36
2485 2577 3.243359 ACTTTTGGGCTTTGATGAGGA 57.757 42.857 0.00 0.00 0.00 3.71
2486 2578 5.467035 TTTACTTTTGGGCTTTGATGAGG 57.533 39.130 0.00 0.00 0.00 3.86
2515 2607 8.836413 TCGTGTTTCTTTCTGTAATTCAAGATT 58.164 29.630 0.00 0.00 0.00 2.40
2516 2608 8.283291 GTCGTGTTTCTTTCTGTAATTCAAGAT 58.717 33.333 0.00 0.00 0.00 2.40
2517 2609 7.279090 TGTCGTGTTTCTTTCTGTAATTCAAGA 59.721 33.333 0.00 0.00 0.00 3.02
2518 2610 7.406553 TGTCGTGTTTCTTTCTGTAATTCAAG 58.593 34.615 0.00 0.00 0.00 3.02
2519 2611 7.310072 TGTCGTGTTTCTTTCTGTAATTCAA 57.690 32.000 0.00 0.00 0.00 2.69
2520 2612 6.912203 TGTCGTGTTTCTTTCTGTAATTCA 57.088 33.333 0.00 0.00 0.00 2.57
2521 2613 8.782533 ATTTGTCGTGTTTCTTTCTGTAATTC 57.217 30.769 0.00 0.00 0.00 2.17
2525 2617 9.493206 GTTTTATTTGTCGTGTTTCTTTCTGTA 57.507 29.630 0.00 0.00 0.00 2.74
2526 2618 8.024285 TGTTTTATTTGTCGTGTTTCTTTCTGT 58.976 29.630 0.00 0.00 0.00 3.41
2527 2619 8.388319 TGTTTTATTTGTCGTGTTTCTTTCTG 57.612 30.769 0.00 0.00 0.00 3.02
2528 2620 8.856247 GTTGTTTTATTTGTCGTGTTTCTTTCT 58.144 29.630 0.00 0.00 0.00 2.52
2529 2621 8.640291 TGTTGTTTTATTTGTCGTGTTTCTTTC 58.360 29.630 0.00 0.00 0.00 2.62
2530 2622 8.522178 TGTTGTTTTATTTGTCGTGTTTCTTT 57.478 26.923 0.00 0.00 0.00 2.52
2531 2623 8.522178 TTGTTGTTTTATTTGTCGTGTTTCTT 57.478 26.923 0.00 0.00 0.00 2.52
2532 2624 8.522178 TTTGTTGTTTTATTTGTCGTGTTTCT 57.478 26.923 0.00 0.00 0.00 2.52
2533 2625 9.582223 TTTTTGTTGTTTTATTTGTCGTGTTTC 57.418 25.926 0.00 0.00 0.00 2.78
2600 2692 8.722394 GGGTTTCAGAATTTTGTTGTTGTTTTA 58.278 29.630 0.00 0.00 0.00 1.52
2601 2693 7.229506 TGGGTTTCAGAATTTTGTTGTTGTTTT 59.770 29.630 0.00 0.00 0.00 2.43
2602 2694 6.712547 TGGGTTTCAGAATTTTGTTGTTGTTT 59.287 30.769 0.00 0.00 0.00 2.83
2603 2695 6.234177 TGGGTTTCAGAATTTTGTTGTTGTT 58.766 32.000 0.00 0.00 0.00 2.83
2604 2696 5.799213 TGGGTTTCAGAATTTTGTTGTTGT 58.201 33.333 0.00 0.00 0.00 3.32
2605 2697 6.734104 TTGGGTTTCAGAATTTTGTTGTTG 57.266 33.333 0.00 0.00 0.00 3.33
2606 2698 7.446931 ACTTTTGGGTTTCAGAATTTTGTTGTT 59.553 29.630 0.00 0.00 0.00 2.83
2607 2699 6.939730 ACTTTTGGGTTTCAGAATTTTGTTGT 59.060 30.769 0.00 0.00 0.00 3.32
2608 2700 7.376435 ACTTTTGGGTTTCAGAATTTTGTTG 57.624 32.000 0.00 0.00 0.00 3.33
2609 2701 9.508642 TTTACTTTTGGGTTTCAGAATTTTGTT 57.491 25.926 0.00 0.00 0.00 2.83
2610 2702 9.508642 TTTTACTTTTGGGTTTCAGAATTTTGT 57.491 25.926 0.00 0.00 0.00 2.83
2656 2748 2.825532 AGGTTCTGCATGCGGTATTTTT 59.174 40.909 25.42 5.89 0.00 1.94
2657 2749 2.446435 AGGTTCTGCATGCGGTATTTT 58.554 42.857 25.42 6.91 0.00 1.82
2658 2750 2.128771 AGGTTCTGCATGCGGTATTT 57.871 45.000 25.42 8.28 0.00 1.40
2659 2751 2.017049 GAAGGTTCTGCATGCGGTATT 58.983 47.619 25.42 15.34 0.00 1.89
2660 2752 1.210478 AGAAGGTTCTGCATGCGGTAT 59.790 47.619 25.42 8.90 35.89 2.73
2661 2753 0.613260 AGAAGGTTCTGCATGCGGTA 59.387 50.000 25.42 14.33 35.89 4.02
2662 2754 0.613260 TAGAAGGTTCTGCATGCGGT 59.387 50.000 25.42 6.33 38.19 5.68
2663 2755 1.134699 TCTAGAAGGTTCTGCATGCGG 60.135 52.381 21.02 21.02 38.19 5.69
2664 2756 2.299993 TCTAGAAGGTTCTGCATGCG 57.700 50.000 14.09 8.20 38.19 4.73
2676 2768 3.003480 CGCTTTTGGGACCTTCTAGAAG 58.997 50.000 23.31 23.31 34.89 2.85
2677 2769 2.290071 CCGCTTTTGGGACCTTCTAGAA 60.290 50.000 4.81 4.81 33.84 2.10
2678 2770 1.278127 CCGCTTTTGGGACCTTCTAGA 59.722 52.381 0.00 0.00 33.84 2.43
2679 2771 1.278127 TCCGCTTTTGGGACCTTCTAG 59.722 52.381 0.00 0.00 33.84 2.43
2680 2772 1.354101 TCCGCTTTTGGGACCTTCTA 58.646 50.000 0.00 0.00 33.84 2.10
2681 2773 0.476771 TTCCGCTTTTGGGACCTTCT 59.523 50.000 0.00 0.00 32.05 2.85
2682 2774 1.545841 ATTCCGCTTTTGGGACCTTC 58.454 50.000 0.00 0.00 32.05 3.46
2683 2775 2.041216 AGTATTCCGCTTTTGGGACCTT 59.959 45.455 0.00 0.00 32.05 3.50
2684 2776 1.633945 AGTATTCCGCTTTTGGGACCT 59.366 47.619 0.00 0.00 32.05 3.85
2685 2777 2.014857 GAGTATTCCGCTTTTGGGACC 58.985 52.381 0.00 0.00 32.05 4.46
2686 2778 2.418976 GTGAGTATTCCGCTTTTGGGAC 59.581 50.000 0.00 0.00 32.05 4.46
2687 2779 2.617021 GGTGAGTATTCCGCTTTTGGGA 60.617 50.000 0.00 0.00 33.84 4.37
2688 2780 1.743394 GGTGAGTATTCCGCTTTTGGG 59.257 52.381 0.00 0.00 0.00 4.12
2689 2781 2.711542 AGGTGAGTATTCCGCTTTTGG 58.288 47.619 0.00 0.00 0.00 3.28
2690 2782 4.250464 TGTAGGTGAGTATTCCGCTTTTG 58.750 43.478 0.00 0.00 0.00 2.44
2691 2783 4.020485 ACTGTAGGTGAGTATTCCGCTTTT 60.020 41.667 0.00 0.00 0.00 2.27
2692 2784 3.514309 ACTGTAGGTGAGTATTCCGCTTT 59.486 43.478 0.00 0.00 0.00 3.51
2693 2785 3.097614 ACTGTAGGTGAGTATTCCGCTT 58.902 45.455 0.00 0.00 0.00 4.68
2694 2786 2.736347 ACTGTAGGTGAGTATTCCGCT 58.264 47.619 0.00 0.00 0.00 5.52
2706 2798 4.067896 CAATTTGAGACTGCACTGTAGGT 58.932 43.478 0.00 0.00 0.00 3.08
2707 2799 3.438087 CCAATTTGAGACTGCACTGTAGG 59.562 47.826 0.00 0.00 0.00 3.18
2708 2800 4.318332 TCCAATTTGAGACTGCACTGTAG 58.682 43.478 0.00 0.00 0.00 2.74
2709 2801 4.350368 TCCAATTTGAGACTGCACTGTA 57.650 40.909 0.00 0.00 0.00 2.74
2710 2802 3.213206 TCCAATTTGAGACTGCACTGT 57.787 42.857 0.00 0.00 0.00 3.55
2711 2803 6.292542 CGTATATCCAATTTGAGACTGCACTG 60.293 42.308 0.00 0.00 0.00 3.66
2712 2804 5.755375 CGTATATCCAATTTGAGACTGCACT 59.245 40.000 0.00 0.00 0.00 4.40
2713 2805 5.050091 CCGTATATCCAATTTGAGACTGCAC 60.050 44.000 0.00 0.00 0.00 4.57
2714 2806 5.056480 CCGTATATCCAATTTGAGACTGCA 58.944 41.667 0.00 0.00 0.00 4.41
2715 2807 4.452455 CCCGTATATCCAATTTGAGACTGC 59.548 45.833 0.00 0.00 0.00 4.40
2716 2808 4.452455 GCCCGTATATCCAATTTGAGACTG 59.548 45.833 0.00 0.00 0.00 3.51
2717 2809 4.642429 GCCCGTATATCCAATTTGAGACT 58.358 43.478 0.00 0.00 0.00 3.24
2718 2810 3.432252 CGCCCGTATATCCAATTTGAGAC 59.568 47.826 0.00 0.00 0.00 3.36
2719 2811 3.659786 CGCCCGTATATCCAATTTGAGA 58.340 45.455 0.00 0.00 0.00 3.27
2720 2812 2.159627 GCGCCCGTATATCCAATTTGAG 59.840 50.000 0.00 0.00 0.00 3.02
2721 2813 2.147958 GCGCCCGTATATCCAATTTGA 58.852 47.619 0.00 0.00 0.00 2.69
2722 2814 2.095768 CAGCGCCCGTATATCCAATTTG 60.096 50.000 2.29 0.00 0.00 2.32
2723 2815 2.151202 CAGCGCCCGTATATCCAATTT 58.849 47.619 2.29 0.00 0.00 1.82
2724 2816 1.346395 TCAGCGCCCGTATATCCAATT 59.654 47.619 2.29 0.00 0.00 2.32
2725 2817 0.973632 TCAGCGCCCGTATATCCAAT 59.026 50.000 2.29 0.00 0.00 3.16
2726 2818 0.973632 ATCAGCGCCCGTATATCCAA 59.026 50.000 2.29 0.00 0.00 3.53
2727 2819 0.246360 CATCAGCGCCCGTATATCCA 59.754 55.000 2.29 0.00 0.00 3.41
2728 2820 0.460284 CCATCAGCGCCCGTATATCC 60.460 60.000 2.29 0.00 0.00 2.59
2729 2821 1.084370 GCCATCAGCGCCCGTATATC 61.084 60.000 2.29 0.00 0.00 1.63
2730 2822 1.079127 GCCATCAGCGCCCGTATAT 60.079 57.895 2.29 0.00 0.00 0.86
2731 2823 2.342279 GCCATCAGCGCCCGTATA 59.658 61.111 2.29 0.00 0.00 1.47


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.