Multiple sequence alignment - TraesCS3D01G040600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G040600 chr3D 100.000 4591 0 0 1 4591 15374871 15370281 0.000000e+00 8479.0
1 TraesCS3D01G040600 chr3D 84.943 1853 189 45 2281 4092 15395965 15394162 0.000000e+00 1794.0
2 TraesCS3D01G040600 chr3D 84.581 1336 160 34 2310 3634 15348878 15347578 0.000000e+00 1284.0
3 TraesCS3D01G040600 chr3D 86.997 969 105 11 982 1947 15397228 15396278 0.000000e+00 1072.0
4 TraesCS3D01G040600 chr3D 83.902 205 12 9 594 786 15397637 15397442 4.720000e-40 176.0
5 TraesCS3D01G040600 chr3A 94.824 3265 122 19 784 4032 20895384 20898617 0.000000e+00 5049.0
6 TraesCS3D01G040600 chr3A 85.768 1855 181 47 2281 4087 20835708 20837527 0.000000e+00 1886.0
7 TraesCS3D01G040600 chr3A 83.001 1453 200 35 2301 3744 20933810 20935224 0.000000e+00 1271.0
8 TraesCS3D01G040600 chr3A 86.667 960 101 13 1000 1947 20834454 20835398 0.000000e+00 1038.0
9 TraesCS3D01G040600 chr3A 80.936 876 141 14 1021 1889 20931620 20932476 0.000000e+00 669.0
10 TraesCS3D01G040600 chr3A 89.177 231 16 5 211 439 20874140 20874363 3.500000e-71 279.0
11 TraesCS3D01G040600 chr3A 90.610 213 7 3 10 214 20852049 20852256 2.110000e-68 270.0
12 TraesCS3D01G040600 chr3A 91.503 153 13 0 2012 2164 20835425 20835577 1.290000e-50 211.0
13 TraesCS3D01G040600 chr3A 83.962 212 14 5 588 784 20895121 20895327 7.840000e-43 185.0
14 TraesCS3D01G040600 chr3A 83.735 166 15 4 4228 4381 20904110 20904275 3.700000e-31 147.0
15 TraesCS3D01G040600 chr3A 75.814 215 37 6 4378 4591 20911406 20911606 1.360000e-15 95.3
16 TraesCS3D01G040600 chr3B 93.620 3260 152 23 982 4225 22510570 22513789 0.000000e+00 4817.0
17 TraesCS3D01G040600 chr3B 82.606 1466 203 32 2292 3747 22473335 22471912 0.000000e+00 1247.0
18 TraesCS3D01G040600 chr3B 82.596 1402 191 36 2292 3664 22345352 22343975 0.000000e+00 1188.0
19 TraesCS3D01G040600 chr3B 92.240 567 38 4 957 1521 22506511 22507073 0.000000e+00 798.0
20 TraesCS3D01G040600 chr3B 80.312 833 122 23 1022 1845 22523549 22524348 3.960000e-165 592.0
21 TraesCS3D01G040600 chr3B 86.323 446 28 12 10 447 22509130 22509550 5.410000e-124 455.0
22 TraesCS3D01G040600 chr3B 93.594 281 5 4 10 282 22501450 22501725 1.540000e-109 407.0
23 TraesCS3D01G040600 chr3B 93.750 256 11 2 441 694 22509721 22509973 3.350000e-101 379.0
24 TraesCS3D01G040600 chr3B 82.834 367 32 15 437 780 22503076 22503434 2.680000e-77 300.0
25 TraesCS3D01G040600 chr3B 89.266 177 10 5 796 971 22510356 22510524 3.600000e-51 213.0
26 TraesCS3D01G040600 chr3B 86.458 192 11 7 849 1034 22502696 22502878 3.620000e-46 196.0
27 TraesCS3D01G040600 chr3B 89.062 128 13 1 313 439 22501708 22501835 1.710000e-34 158.0
28 TraesCS3D01G040600 chr3B 75.660 341 40 18 477 793 22349665 22349344 3.730000e-26 130.0
29 TraesCS3D01G040600 chr3B 96.203 79 3 0 616 694 22502593 22502671 3.730000e-26 130.0
30 TraesCS3D01G040600 chr5D 82.230 1435 196 39 2292 3692 558347236 558345827 0.000000e+00 1182.0
31 TraesCS3D01G040600 chr4A 84.194 968 124 15 2653 3599 611269553 611268594 0.000000e+00 913.0
32 TraesCS3D01G040600 chr7A 79.358 1371 225 34 2286 3612 63778409 63779765 0.000000e+00 911.0
33 TraesCS3D01G040600 chr7A 83.168 101 17 0 1565 1665 20513092 20512992 4.890000e-15 93.5
34 TraesCS3D01G040600 chr6A 79.114 158 31 2 1073 1229 528573740 528573896 1.750000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G040600 chr3D 15370281 15374871 4590 True 8479.0 8479 100.000000 1 4591 1 chr3D.!!$R2 4590
1 TraesCS3D01G040600 chr3D 15347578 15348878 1300 True 1284.0 1284 84.581000 2310 3634 1 chr3D.!!$R1 1324
2 TraesCS3D01G040600 chr3D 15394162 15397637 3475 True 1014.0 1794 85.280667 594 4092 3 chr3D.!!$R3 3498
3 TraesCS3D01G040600 chr3A 20895121 20898617 3496 False 2617.0 5049 89.393000 588 4032 2 chr3A.!!$F6 3444
4 TraesCS3D01G040600 chr3A 20834454 20837527 3073 False 1045.0 1886 87.979333 1000 4087 3 chr3A.!!$F5 3087
5 TraesCS3D01G040600 chr3A 20931620 20935224 3604 False 970.0 1271 81.968500 1021 3744 2 chr3A.!!$F7 2723
6 TraesCS3D01G040600 chr3B 22471912 22473335 1423 True 1247.0 1247 82.606000 2292 3747 1 chr3B.!!$R1 1455
7 TraesCS3D01G040600 chr3B 22501450 22513789 12339 False 785.3 4817 90.335000 10 4225 10 chr3B.!!$F2 4215
8 TraesCS3D01G040600 chr3B 22343975 22349665 5690 True 659.0 1188 79.128000 477 3664 2 chr3B.!!$R2 3187
9 TraesCS3D01G040600 chr3B 22523549 22524348 799 False 592.0 592 80.312000 1022 1845 1 chr3B.!!$F1 823
10 TraesCS3D01G040600 chr5D 558345827 558347236 1409 True 1182.0 1182 82.230000 2292 3692 1 chr5D.!!$R1 1400
11 TraesCS3D01G040600 chr4A 611268594 611269553 959 True 913.0 913 84.194000 2653 3599 1 chr4A.!!$R1 946
12 TraesCS3D01G040600 chr7A 63778409 63779765 1356 False 911.0 911 79.358000 2286 3612 1 chr7A.!!$F1 1326

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
576 8426 0.036765 TTCGGCGTGATTAGTGCCTT 60.037 50.000 6.85 0.0 46.67 4.35 F
577 8427 0.739462 TCGGCGTGATTAGTGCCTTG 60.739 55.000 6.85 0.0 46.67 3.61 F
1554 9852 1.556451 GGAACCTACCCCAACGTGTAT 59.444 52.381 0.00 0.0 0.00 2.29 F
1819 10120 2.226962 TCCCGTAGCTGTAGTTTCCT 57.773 50.000 0.00 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2008 11216 0.171455 GCACGTCTCGATCCTTGAGT 59.829 55.000 0.0 0.0 34.99 3.41 R
2010 11218 0.452184 GAGCACGTCTCGATCCTTGA 59.548 55.000 0.0 0.0 31.20 3.02 R
3110 14903 3.372206 GGATCTCAAGAATGACAACACCG 59.628 47.826 0.0 0.0 0.00 4.94 R
3729 15564 1.699634 AGGTTGCTCCAAGTAGCTTCA 59.300 47.619 0.0 0.0 43.19 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 4.424626 TCTACAATTGATGAGTGCTCGAC 58.575 43.478 13.59 0.00 0.00 4.20
116 117 5.051240 CGTGGAAATTATTAGTCGCTGGTAC 60.051 44.000 0.00 0.00 0.00 3.34
117 118 6.047231 GTGGAAATTATTAGTCGCTGGTACT 58.953 40.000 0.00 0.00 0.00 2.73
170 7843 7.361286 CCAACAAAGACTCCTAGCTAAAATGAC 60.361 40.741 0.00 0.00 0.00 3.06
172 7845 7.454225 ACAAAGACTCCTAGCTAAAATGACTT 58.546 34.615 0.00 0.00 0.00 3.01
180 7853 6.071560 TCCTAGCTAAAATGACTTCAGAACGA 60.072 38.462 0.00 0.00 0.00 3.85
263 7936 7.423199 CAATCAAGGTCATCGAAATCATGATT 58.577 34.615 15.36 15.36 35.90 2.57
264 7937 6.609237 TCAAGGTCATCGAAATCATGATTC 57.391 37.500 20.95 13.10 32.86 2.52
271 7944 7.816513 GGTCATCGAAATCATGATTCTCTATCA 59.183 37.037 20.95 6.55 46.86 2.15
289 7962 8.784994 TCTCTATCATATGGTTCTACGACTTTC 58.215 37.037 2.13 0.00 0.00 2.62
296 7969 8.568794 CATATGGTTCTACGACTTTCAGATCTA 58.431 37.037 0.00 0.00 0.00 1.98
302 7975 9.355215 GTTCTACGACTTTCAGATCTAAATTGA 57.645 33.333 0.00 0.00 0.00 2.57
303 7976 8.912787 TCTACGACTTTCAGATCTAAATTGAC 57.087 34.615 0.00 0.00 0.00 3.18
310 7983 7.389053 ACTTTCAGATCTAAATTGACTGGACAC 59.611 37.037 0.00 0.00 0.00 3.67
311 7984 5.410924 TCAGATCTAAATTGACTGGACACG 58.589 41.667 0.00 0.00 0.00 4.49
317 7990 6.931838 TCTAAATTGACTGGACACGTTCTAT 58.068 36.000 0.00 0.00 0.00 1.98
319 7992 8.692710 TCTAAATTGACTGGACACGTTCTATAT 58.307 33.333 0.00 0.00 0.00 0.86
320 7993 9.961265 CTAAATTGACTGGACACGTTCTATATA 57.039 33.333 0.00 0.00 0.00 0.86
322 7995 8.818141 AATTGACTGGACACGTTCTATATATG 57.182 34.615 0.00 0.00 0.00 1.78
345 8018 6.064060 TGATTCTAGCCAATAAAGTCCATGG 58.936 40.000 4.97 4.97 36.00 3.66
361 8034 7.316544 AGTCCATGGTTTTACGATTGTAATC 57.683 36.000 12.58 3.77 40.14 1.75
400 8073 4.323553 AACGATCTTACCACATAGGCTC 57.676 45.455 0.00 0.00 43.14 4.70
425 8098 4.035675 GTCCAATTCAGAATCACGATTCCC 59.964 45.833 14.65 0.00 46.28 3.97
426 8099 4.080356 TCCAATTCAGAATCACGATTCCCT 60.080 41.667 14.65 0.00 46.28 4.20
430 8103 5.932619 TTCAGAATCACGATTCCCTCTAA 57.067 39.130 14.65 2.30 46.28 2.10
432 8105 4.956700 TCAGAATCACGATTCCCTCTAACT 59.043 41.667 14.65 0.00 46.28 2.24
439 8112 3.260884 ACGATTCCCTCTAACTCTTGCAA 59.739 43.478 0.00 0.00 0.00 4.08
560 8410 6.302313 GTGGAACTTACAATTCACGAAATTCG 59.698 38.462 14.35 14.35 46.93 3.34
563 8413 2.241259 ACAATTCACGAAATTCGGCG 57.759 45.000 19.95 10.25 45.59 6.46
575 8425 0.178068 ATTCGGCGTGATTAGTGCCT 59.822 50.000 6.85 0.00 46.67 4.75
576 8426 0.036765 TTCGGCGTGATTAGTGCCTT 60.037 50.000 6.85 0.00 46.67 4.35
577 8427 0.739462 TCGGCGTGATTAGTGCCTTG 60.739 55.000 6.85 0.00 46.67 3.61
786 8909 9.997482 GAACAATTTTGTCAAAGTAAGACAGTA 57.003 29.630 0.00 0.00 45.72 2.74
1062 9346 2.889617 CCGACACCGTATCTGGCA 59.110 61.111 0.00 0.00 0.00 4.92
1095 9379 4.072088 GACAACGTCAAGGCCGCG 62.072 66.667 0.00 0.00 32.09 6.46
1134 9418 3.787001 GCCTCCTCTTCCCCGGTG 61.787 72.222 0.00 0.00 0.00 4.94
1535 9833 3.156293 TCATGGACATGAAAACAGTGGG 58.844 45.455 12.27 0.00 44.14 4.61
1554 9852 1.556451 GGAACCTACCCCAACGTGTAT 59.444 52.381 0.00 0.00 0.00 2.29
1816 10117 3.369157 GGTGATTCCCGTAGCTGTAGTTT 60.369 47.826 0.00 0.00 0.00 2.66
1818 10119 3.118884 TGATTCCCGTAGCTGTAGTTTCC 60.119 47.826 0.00 0.00 0.00 3.13
1819 10120 2.226962 TCCCGTAGCTGTAGTTTCCT 57.773 50.000 0.00 0.00 0.00 3.36
1820 10121 2.532843 TCCCGTAGCTGTAGTTTCCTT 58.467 47.619 0.00 0.00 0.00 3.36
1821 10122 2.901839 TCCCGTAGCTGTAGTTTCCTTT 59.098 45.455 0.00 0.00 0.00 3.11
1822 10123 3.000727 CCCGTAGCTGTAGTTTCCTTTG 58.999 50.000 0.00 0.00 0.00 2.77
1930 10240 8.299262 AGTGGATTCGTTCTTTCATATAATCG 57.701 34.615 0.00 0.00 0.00 3.34
1970 11178 5.895636 TTGGTGATTTGTTACTGCTATGG 57.104 39.130 0.00 0.00 0.00 2.74
1994 11202 8.412456 TGGTATTTGATGGCAATAATGTTACTG 58.588 33.333 0.00 0.00 33.25 2.74
1998 11206 9.941325 ATTTGATGGCAATAATGTTACTGAAAA 57.059 25.926 0.00 0.00 33.25 2.29
1999 11207 9.770097 TTTGATGGCAATAATGTTACTGAAAAA 57.230 25.926 0.00 0.00 33.25 1.94
2200 11915 6.640907 GCCACTTTTATTGTCAACTGTTTAGG 59.359 38.462 0.00 0.00 0.00 2.69
2230 11945 5.989777 CCTAATACGGTCCCTTGTATGAAAG 59.010 44.000 0.00 0.00 31.89 2.62
2261 13915 7.126726 ACCTGGCTGATAAGTTAGTAAATGGTA 59.873 37.037 0.00 0.00 0.00 3.25
2262 13916 7.657761 CCTGGCTGATAAGTTAGTAAATGGTAG 59.342 40.741 0.00 0.00 0.00 3.18
2263 13917 6.990349 TGGCTGATAAGTTAGTAAATGGTAGC 59.010 38.462 0.00 0.00 0.00 3.58
2264 13918 7.147549 TGGCTGATAAGTTAGTAAATGGTAGCT 60.148 37.037 0.00 0.00 0.00 3.32
2278 13932 9.478768 GTAAATGGTAGCTAGAGAAGGATTAAC 57.521 37.037 0.00 0.00 0.00 2.01
2332 14017 2.833604 CTTCAGGGCCAGCTTCCAGG 62.834 65.000 6.18 0.00 0.00 4.45
2630 14338 3.006859 GGCTTGTTTTTGGCAGTCCTATT 59.993 43.478 0.00 0.00 0.00 1.73
2687 14453 7.695055 TCATTTATCTGGGTGTCTTTTTCCTA 58.305 34.615 0.00 0.00 0.00 2.94
3110 14903 6.610741 ATTAAATCCGATGTCTTCAGCTTC 57.389 37.500 0.00 0.00 0.00 3.86
3267 15100 9.679661 TTCTCATTTTCTATACAACCTAATGCA 57.320 29.630 0.00 0.00 0.00 3.96
3350 15184 4.976224 TGATGCATCATTGGTTTCTGAG 57.024 40.909 25.42 0.00 0.00 3.35
3463 15297 7.628769 TTATGTCAATGCTAAGCAATGAGAA 57.371 32.000 0.00 0.00 46.94 2.87
3465 15299 6.127810 TGTCAATGCTAAGCAATGAGAATC 57.872 37.500 0.00 0.00 46.94 2.52
3646 15481 6.429692 TCCATTTGTAGTACATTCACACCAAG 59.570 38.462 3.28 0.00 0.00 3.61
3729 15564 7.039011 CCCCAAAAAGTATAAGAGAAAGGCTTT 60.039 37.037 13.25 13.25 0.00 3.51
3749 15584 1.699634 TGAAGCTACTTGGAGCAACCT 59.300 47.619 7.65 0.00 45.43 3.50
3848 15687 5.933187 TGTTGTCACGCATACTAAAACAT 57.067 34.783 0.00 0.00 0.00 2.71
3867 15726 3.056250 ACATTGCCAAATGCGGTTGATTA 60.056 39.130 0.93 0.00 46.06 1.75
3924 15785 5.668558 ACGGACAAAATGAGAACTACAAC 57.331 39.130 0.00 0.00 0.00 3.32
4048 15912 2.609459 AGATTGCGTCTATCCAAAAGCG 59.391 45.455 0.00 0.00 34.69 4.68
4065 15929 1.003545 AGCGCGTGCAATATGAATCAC 60.004 47.619 24.79 0.00 46.23 3.06
4089 15954 1.388174 TTTTCCTCCATAAGGGGCCA 58.612 50.000 4.39 0.00 46.23 5.36
4092 15957 0.772124 TCCTCCATAAGGGGCCATCC 60.772 60.000 4.39 0.00 46.23 3.51
4107 15972 3.134804 GGCCATCCGCTTCCTGTATATAT 59.865 47.826 0.00 0.00 37.74 0.86
4108 15973 4.344102 GGCCATCCGCTTCCTGTATATATA 59.656 45.833 0.00 0.00 37.74 0.86
4109 15974 5.012148 GGCCATCCGCTTCCTGTATATATAT 59.988 44.000 0.00 0.00 37.74 0.86
4110 15975 6.210784 GGCCATCCGCTTCCTGTATATATATA 59.789 42.308 0.00 0.00 37.74 0.86
4111 15976 7.316640 GCCATCCGCTTCCTGTATATATATAG 58.683 42.308 9.04 9.04 0.00 1.31
4112 15977 7.039644 GCCATCCGCTTCCTGTATATATATAGT 60.040 40.741 13.60 0.00 0.00 2.12
4113 15978 8.861086 CCATCCGCTTCCTGTATATATATAGTT 58.139 37.037 13.60 0.00 0.00 2.24
4119 15984 9.878737 GCTTCCTGTATATATATAGTTAGGGGA 57.121 37.037 18.57 11.21 0.00 4.81
4148 16013 0.759346 GGCGGGTACATGAATCCTCT 59.241 55.000 0.00 0.00 0.00 3.69
4157 16024 0.962489 ATGAATCCTCTACCGAGCGG 59.038 55.000 7.48 7.48 42.03 5.52
4166 16033 1.471684 TCTACCGAGCGGAACTCTTTC 59.528 52.381 16.83 0.00 43.85 2.62
4174 16041 1.270893 GCGGAACTCTTTCTGTCCCTT 60.271 52.381 0.00 0.00 39.95 3.95
4193 16060 3.473625 CTTGTCCTACGGTTGGTTTTCT 58.526 45.455 8.45 0.00 0.00 2.52
4225 16092 4.324719 GGGATTCCAAGTGTTGTATGGGTA 60.325 45.833 4.80 0.00 34.89 3.69
4226 16093 5.258051 GGATTCCAAGTGTTGTATGGGTAA 58.742 41.667 0.00 0.00 34.89 2.85
4227 16094 5.891551 GGATTCCAAGTGTTGTATGGGTAAT 59.108 40.000 0.00 0.00 34.89 1.89
4228 16095 6.379988 GGATTCCAAGTGTTGTATGGGTAATT 59.620 38.462 0.00 0.00 34.89 1.40
4229 16096 7.093509 GGATTCCAAGTGTTGTATGGGTAATTT 60.094 37.037 0.00 0.00 34.89 1.82
4230 16097 7.604657 TTCCAAGTGTTGTATGGGTAATTTT 57.395 32.000 0.00 0.00 34.89 1.82
4231 16098 7.604657 TCCAAGTGTTGTATGGGTAATTTTT 57.395 32.000 0.00 0.00 34.89 1.94
4232 16099 7.662897 TCCAAGTGTTGTATGGGTAATTTTTC 58.337 34.615 0.00 0.00 34.89 2.29
4233 16100 7.507616 TCCAAGTGTTGTATGGGTAATTTTTCT 59.492 33.333 0.00 0.00 34.89 2.52
4234 16101 8.147704 CCAAGTGTTGTATGGGTAATTTTTCTT 58.852 33.333 0.00 0.00 0.00 2.52
4263 16130 9.291664 CTCTTATTAGAGTCTTTCCAAAGTACG 57.708 37.037 0.00 0.00 42.50 3.67
4264 16131 9.017509 TCTTATTAGAGTCTTTCCAAAGTACGA 57.982 33.333 0.00 0.00 37.31 3.43
4265 16132 8.976986 TTATTAGAGTCTTTCCAAAGTACGAC 57.023 34.615 0.00 0.00 37.31 4.34
4266 16133 6.645790 TTAGAGTCTTTCCAAAGTACGACT 57.354 37.500 0.00 0.00 37.31 4.18
4267 16134 7.750229 TTAGAGTCTTTCCAAAGTACGACTA 57.250 36.000 0.00 4.40 37.31 2.59
4268 16135 6.837471 AGAGTCTTTCCAAAGTACGACTAT 57.163 37.500 0.00 0.00 37.31 2.12
4269 16136 6.622549 AGAGTCTTTCCAAAGTACGACTATG 58.377 40.000 0.00 0.00 37.31 2.23
4270 16137 6.208994 AGAGTCTTTCCAAAGTACGACTATGT 59.791 38.462 0.00 0.00 37.31 2.29
4271 16138 6.157211 AGTCTTTCCAAAGTACGACTATGTG 58.843 40.000 0.00 0.00 37.31 3.21
4272 16139 5.924825 GTCTTTCCAAAGTACGACTATGTGT 59.075 40.000 0.00 0.00 37.31 3.72
4273 16140 5.924254 TCTTTCCAAAGTACGACTATGTGTG 59.076 40.000 0.00 0.00 37.31 3.82
4274 16141 4.182693 TCCAAAGTACGACTATGTGTGG 57.817 45.455 0.00 0.00 0.00 4.17
4275 16142 3.056393 TCCAAAGTACGACTATGTGTGGG 60.056 47.826 0.00 0.00 0.00 4.61
4276 16143 3.306502 CCAAAGTACGACTATGTGTGGGT 60.307 47.826 0.00 0.00 0.00 4.51
4277 16144 4.312443 CAAAGTACGACTATGTGTGGGTT 58.688 43.478 0.00 0.00 0.00 4.11
4278 16145 4.612264 AAGTACGACTATGTGTGGGTTT 57.388 40.909 0.00 0.00 0.00 3.27
4279 16146 4.184079 AGTACGACTATGTGTGGGTTTC 57.816 45.455 0.00 0.00 0.00 2.78
4280 16147 3.830755 AGTACGACTATGTGTGGGTTTCT 59.169 43.478 0.00 0.00 0.00 2.52
4281 16148 5.012239 AGTACGACTATGTGTGGGTTTCTA 58.988 41.667 0.00 0.00 0.00 2.10
4282 16149 4.451629 ACGACTATGTGTGGGTTTCTAG 57.548 45.455 0.00 0.00 0.00 2.43
4283 16150 4.084287 ACGACTATGTGTGGGTTTCTAGA 58.916 43.478 0.00 0.00 0.00 2.43
4284 16151 4.525487 ACGACTATGTGTGGGTTTCTAGAA 59.475 41.667 0.00 0.00 0.00 2.10
4285 16152 5.103000 CGACTATGTGTGGGTTTCTAGAAG 58.897 45.833 5.12 0.00 0.00 2.85
4286 16153 5.420409 GACTATGTGTGGGTTTCTAGAAGG 58.580 45.833 5.12 0.00 0.00 3.46
4287 16154 2.561478 TGTGTGGGTTTCTAGAAGGC 57.439 50.000 5.12 3.17 0.00 4.35
4288 16155 2.054799 TGTGTGGGTTTCTAGAAGGCT 58.945 47.619 5.12 0.00 0.00 4.58
4289 16156 2.038557 TGTGTGGGTTTCTAGAAGGCTC 59.961 50.000 5.12 3.87 0.00 4.70
4290 16157 1.628846 TGTGGGTTTCTAGAAGGCTCC 59.371 52.381 5.12 7.27 0.00 4.70
4291 16158 1.909986 GTGGGTTTCTAGAAGGCTCCT 59.090 52.381 5.12 0.00 0.00 3.69
4292 16159 2.306219 GTGGGTTTCTAGAAGGCTCCTT 59.694 50.000 5.12 0.00 39.23 3.36
4293 16160 2.305927 TGGGTTTCTAGAAGGCTCCTTG 59.694 50.000 5.80 0.00 36.26 3.61
4294 16161 2.356227 GGGTTTCTAGAAGGCTCCTTGG 60.356 54.545 5.80 0.00 36.26 3.61
4295 16162 2.572104 GGTTTCTAGAAGGCTCCTTGGA 59.428 50.000 5.80 0.00 36.26 3.53
4296 16163 3.201045 GGTTTCTAGAAGGCTCCTTGGAT 59.799 47.826 5.80 0.00 36.26 3.41
4297 16164 4.409247 GGTTTCTAGAAGGCTCCTTGGATA 59.591 45.833 5.80 0.00 36.26 2.59
4298 16165 5.072464 GGTTTCTAGAAGGCTCCTTGGATAT 59.928 44.000 5.80 0.00 36.26 1.63
4299 16166 6.270231 GGTTTCTAGAAGGCTCCTTGGATATA 59.730 42.308 5.80 0.00 36.26 0.86
4300 16167 7.382898 GTTTCTAGAAGGCTCCTTGGATATAG 58.617 42.308 5.80 1.67 36.26 1.31
4301 16168 6.220881 TCTAGAAGGCTCCTTGGATATAGT 57.779 41.667 5.80 0.00 36.26 2.12
4302 16169 7.344599 TCTAGAAGGCTCCTTGGATATAGTA 57.655 40.000 5.80 0.00 36.26 1.82
4303 16170 7.406916 TCTAGAAGGCTCCTTGGATATAGTAG 58.593 42.308 5.80 0.00 36.26 2.57
4304 16171 5.971493 AGAAGGCTCCTTGGATATAGTAGT 58.029 41.667 5.80 0.00 36.26 2.73
4305 16172 6.386284 AGAAGGCTCCTTGGATATAGTAGTT 58.614 40.000 5.80 0.00 36.26 2.24
4306 16173 6.268847 AGAAGGCTCCTTGGATATAGTAGTTG 59.731 42.308 5.80 0.00 36.26 3.16
4307 16174 5.468658 AGGCTCCTTGGATATAGTAGTTGT 58.531 41.667 0.00 0.00 0.00 3.32
4308 16175 6.621394 AGGCTCCTTGGATATAGTAGTTGTA 58.379 40.000 0.00 0.00 0.00 2.41
4309 16176 6.494146 AGGCTCCTTGGATATAGTAGTTGTAC 59.506 42.308 0.00 0.00 0.00 2.90
4310 16177 6.267014 GGCTCCTTGGATATAGTAGTTGTACA 59.733 42.308 0.00 0.00 0.00 2.90
4311 16178 7.146648 GCTCCTTGGATATAGTAGTTGTACAC 58.853 42.308 0.00 0.00 0.00 2.90
4312 16179 7.014422 GCTCCTTGGATATAGTAGTTGTACACT 59.986 40.741 0.00 0.00 39.87 3.55
4313 16180 9.570468 CTCCTTGGATATAGTAGTTGTACACTA 57.430 37.037 0.00 0.00 36.88 2.74
4328 16195 9.424319 AGTTGTACACTACTTGTATTCAGATTG 57.576 33.333 0.00 0.00 42.82 2.67
4329 16196 9.419297 GTTGTACACTACTTGTATTCAGATTGA 57.581 33.333 0.00 0.00 42.82 2.57
4339 16206 9.995003 ACTTGTATTCAGATTGATTCTATCTCC 57.005 33.333 7.53 0.00 31.77 3.71
4340 16207 9.138062 CTTGTATTCAGATTGATTCTATCTCCG 57.862 37.037 7.53 0.00 31.77 4.63
4341 16208 7.606349 TGTATTCAGATTGATTCTATCTCCGG 58.394 38.462 7.53 0.00 31.77 5.14
4342 16209 6.678568 ATTCAGATTGATTCTATCTCCGGT 57.321 37.500 0.00 0.00 31.77 5.28
4343 16210 5.459536 TCAGATTGATTCTATCTCCGGTG 57.540 43.478 0.00 0.00 31.77 4.94
4344 16211 4.281941 TCAGATTGATTCTATCTCCGGTGG 59.718 45.833 0.00 0.00 31.77 4.61
4345 16212 2.910688 TTGATTCTATCTCCGGTGGC 57.089 50.000 0.00 0.00 0.00 5.01
4346 16213 1.788229 TGATTCTATCTCCGGTGGCA 58.212 50.000 0.00 0.00 0.00 4.92
4347 16214 1.412710 TGATTCTATCTCCGGTGGCAC 59.587 52.381 9.70 9.70 0.00 5.01
4348 16215 1.689273 GATTCTATCTCCGGTGGCACT 59.311 52.381 18.45 0.00 0.00 4.40
4349 16216 1.112113 TTCTATCTCCGGTGGCACTC 58.888 55.000 18.45 6.81 0.00 3.51
4350 16217 0.755698 TCTATCTCCGGTGGCACTCC 60.756 60.000 18.45 0.00 38.86 3.85
4351 16218 1.001120 TATCTCCGGTGGCACTCCA 59.999 57.895 18.45 0.12 43.09 3.86
4352 16219 0.398522 TATCTCCGGTGGCACTCCAT 60.399 55.000 18.45 5.59 45.62 3.41
4353 16220 1.274703 ATCTCCGGTGGCACTCCATT 61.275 55.000 18.45 0.00 45.62 3.16
4354 16221 1.746615 CTCCGGTGGCACTCCATTG 60.747 63.158 18.45 0.99 45.62 2.82
4355 16222 2.751436 CCGGTGGCACTCCATTGG 60.751 66.667 18.45 6.40 45.62 3.16
4356 16223 2.034066 CGGTGGCACTCCATTGGT 59.966 61.111 18.45 0.00 45.62 3.67
4357 16224 1.603455 CGGTGGCACTCCATTGGTT 60.603 57.895 18.45 0.00 45.62 3.67
4358 16225 1.865788 CGGTGGCACTCCATTGGTTG 61.866 60.000 18.45 2.84 45.62 3.77
4359 16226 0.539438 GGTGGCACTCCATTGGTTGA 60.539 55.000 18.45 0.00 45.62 3.18
4360 16227 0.883833 GTGGCACTCCATTGGTTGAG 59.116 55.000 11.13 0.00 45.62 3.02
4361 16228 0.770499 TGGCACTCCATTGGTTGAGA 59.230 50.000 1.86 0.00 37.47 3.27
4362 16229 1.355381 TGGCACTCCATTGGTTGAGAT 59.645 47.619 1.86 0.00 37.47 2.75
4363 16230 1.747355 GGCACTCCATTGGTTGAGATG 59.253 52.381 1.86 0.00 32.84 2.90
4364 16231 2.618816 GGCACTCCATTGGTTGAGATGA 60.619 50.000 1.86 0.00 32.84 2.92
4365 16232 3.285484 GCACTCCATTGGTTGAGATGAT 58.715 45.455 1.86 0.00 32.84 2.45
4366 16233 3.066342 GCACTCCATTGGTTGAGATGATG 59.934 47.826 1.86 0.00 32.84 3.07
4367 16234 4.520179 CACTCCATTGGTTGAGATGATGA 58.480 43.478 1.86 0.00 32.84 2.92
4368 16235 5.131067 CACTCCATTGGTTGAGATGATGAT 58.869 41.667 1.86 0.00 32.84 2.45
4369 16236 5.008712 CACTCCATTGGTTGAGATGATGATG 59.991 44.000 1.86 0.00 32.84 3.07
4370 16237 3.887110 TCCATTGGTTGAGATGATGATGC 59.113 43.478 1.86 0.00 0.00 3.91
4371 16238 3.634910 CCATTGGTTGAGATGATGATGCA 59.365 43.478 0.00 0.00 0.00 3.96
4372 16239 4.280929 CCATTGGTTGAGATGATGATGCAT 59.719 41.667 0.00 0.00 0.00 3.96
4373 16240 5.461526 CATTGGTTGAGATGATGATGCATC 58.538 41.667 20.14 20.14 43.88 3.91
4383 16250 5.913637 GATGATGATGCATCGAGTTAGTTG 58.086 41.667 21.34 0.00 43.14 3.16
4384 16251 4.758688 TGATGATGCATCGAGTTAGTTGT 58.241 39.130 21.34 0.00 43.14 3.32
4385 16252 4.567959 TGATGATGCATCGAGTTAGTTGTG 59.432 41.667 21.34 0.00 43.14 3.33
4386 16253 3.261580 TGATGCATCGAGTTAGTTGTGG 58.738 45.455 21.34 0.00 0.00 4.17
4387 16254 1.438651 TGCATCGAGTTAGTTGTGGC 58.561 50.000 0.00 0.00 0.00 5.01
4388 16255 0.727398 GCATCGAGTTAGTTGTGGCC 59.273 55.000 0.00 0.00 0.00 5.36
4389 16256 1.943968 GCATCGAGTTAGTTGTGGCCA 60.944 52.381 0.00 0.00 0.00 5.36
4390 16257 2.632377 CATCGAGTTAGTTGTGGCCAT 58.368 47.619 9.72 0.00 0.00 4.40
4391 16258 2.093306 TCGAGTTAGTTGTGGCCATG 57.907 50.000 9.72 0.00 0.00 3.66
4392 16259 1.086696 CGAGTTAGTTGTGGCCATGG 58.913 55.000 9.72 7.63 0.00 3.66
4393 16260 1.463674 GAGTTAGTTGTGGCCATGGG 58.536 55.000 9.72 0.00 0.00 4.00
4394 16261 1.004277 GAGTTAGTTGTGGCCATGGGA 59.996 52.381 9.72 0.00 0.00 4.37
4395 16262 1.004745 AGTTAGTTGTGGCCATGGGAG 59.995 52.381 9.72 0.00 0.00 4.30
4396 16263 0.331278 TTAGTTGTGGCCATGGGAGG 59.669 55.000 9.72 0.00 0.00 4.30
4397 16264 0.548926 TAGTTGTGGCCATGGGAGGA 60.549 55.000 9.72 0.00 0.00 3.71
4398 16265 1.379044 GTTGTGGCCATGGGAGGAG 60.379 63.158 9.72 0.00 0.00 3.69
4399 16266 1.541118 TTGTGGCCATGGGAGGAGA 60.541 57.895 9.72 0.00 0.00 3.71
4400 16267 1.565390 TTGTGGCCATGGGAGGAGAG 61.565 60.000 9.72 0.00 0.00 3.20
4401 16268 1.690633 GTGGCCATGGGAGGAGAGA 60.691 63.158 9.72 0.00 0.00 3.10
4402 16269 1.082766 TGGCCATGGGAGGAGAGAA 59.917 57.895 15.13 0.00 0.00 2.87
4403 16270 0.549902 TGGCCATGGGAGGAGAGAAA 60.550 55.000 15.13 0.00 0.00 2.52
4404 16271 0.182299 GGCCATGGGAGGAGAGAAAG 59.818 60.000 15.13 0.00 0.00 2.62
4405 16272 1.207791 GCCATGGGAGGAGAGAAAGA 58.792 55.000 15.13 0.00 0.00 2.52
4406 16273 1.561542 GCCATGGGAGGAGAGAAAGAA 59.438 52.381 15.13 0.00 0.00 2.52
4407 16274 2.421248 GCCATGGGAGGAGAGAAAGAAG 60.421 54.545 15.13 0.00 0.00 2.85
4408 16275 2.172293 CCATGGGAGGAGAGAAAGAAGG 59.828 54.545 2.85 0.00 0.00 3.46
4409 16276 3.110705 CATGGGAGGAGAGAAAGAAGGA 58.889 50.000 0.00 0.00 0.00 3.36
4410 16277 2.826488 TGGGAGGAGAGAAAGAAGGAG 58.174 52.381 0.00 0.00 0.00 3.69
4411 16278 2.112691 TGGGAGGAGAGAAAGAAGGAGT 59.887 50.000 0.00 0.00 0.00 3.85
4412 16279 2.499693 GGGAGGAGAGAAAGAAGGAGTG 59.500 54.545 0.00 0.00 0.00 3.51
4413 16280 2.499693 GGAGGAGAGAAAGAAGGAGTGG 59.500 54.545 0.00 0.00 0.00 4.00
4414 16281 2.499693 GAGGAGAGAAAGAAGGAGTGGG 59.500 54.545 0.00 0.00 0.00 4.61
4415 16282 2.112691 AGGAGAGAAAGAAGGAGTGGGA 59.887 50.000 0.00 0.00 0.00 4.37
4416 16283 2.499693 GGAGAGAAAGAAGGAGTGGGAG 59.500 54.545 0.00 0.00 0.00 4.30
4417 16284 2.499693 GAGAGAAAGAAGGAGTGGGAGG 59.500 54.545 0.00 0.00 0.00 4.30
4418 16285 2.112691 AGAGAAAGAAGGAGTGGGAGGA 59.887 50.000 0.00 0.00 0.00 3.71
4419 16286 2.907042 GAGAAAGAAGGAGTGGGAGGAA 59.093 50.000 0.00 0.00 0.00 3.36
4420 16287 3.327439 AGAAAGAAGGAGTGGGAGGAAA 58.673 45.455 0.00 0.00 0.00 3.13
4421 16288 3.329225 AGAAAGAAGGAGTGGGAGGAAAG 59.671 47.826 0.00 0.00 0.00 2.62
4422 16289 0.988063 AGAAGGAGTGGGAGGAAAGC 59.012 55.000 0.00 0.00 0.00 3.51
4423 16290 0.693049 GAAGGAGTGGGAGGAAAGCA 59.307 55.000 0.00 0.00 0.00 3.91
4424 16291 1.073923 GAAGGAGTGGGAGGAAAGCAA 59.926 52.381 0.00 0.00 0.00 3.91
4425 16292 1.149101 AGGAGTGGGAGGAAAGCAAA 58.851 50.000 0.00 0.00 0.00 3.68
4426 16293 1.074566 AGGAGTGGGAGGAAAGCAAAG 59.925 52.381 0.00 0.00 0.00 2.77
4427 16294 1.539157 GAGTGGGAGGAAAGCAAAGG 58.461 55.000 0.00 0.00 0.00 3.11
4428 16295 0.113190 AGTGGGAGGAAAGCAAAGGG 59.887 55.000 0.00 0.00 0.00 3.95
4429 16296 0.900182 GTGGGAGGAAAGCAAAGGGG 60.900 60.000 0.00 0.00 0.00 4.79
4430 16297 1.305297 GGGAGGAAAGCAAAGGGGG 60.305 63.158 0.00 0.00 0.00 5.40
4431 16298 1.465172 GGAGGAAAGCAAAGGGGGT 59.535 57.895 0.00 0.00 0.00 4.95
4432 16299 0.178932 GGAGGAAAGCAAAGGGGGTT 60.179 55.000 0.00 0.00 0.00 4.11
4433 16300 1.076513 GGAGGAAAGCAAAGGGGGTTA 59.923 52.381 0.00 0.00 0.00 2.85
4434 16301 2.292257 GGAGGAAAGCAAAGGGGGTTAT 60.292 50.000 0.00 0.00 0.00 1.89
4435 16302 2.760650 GAGGAAAGCAAAGGGGGTTATG 59.239 50.000 0.00 0.00 0.00 1.90
4436 16303 2.381961 AGGAAAGCAAAGGGGGTTATGA 59.618 45.455 0.00 0.00 0.00 2.15
4437 16304 2.760650 GGAAAGCAAAGGGGGTTATGAG 59.239 50.000 0.00 0.00 0.00 2.90
4438 16305 3.563479 GGAAAGCAAAGGGGGTTATGAGA 60.563 47.826 0.00 0.00 0.00 3.27
4439 16306 4.281657 GAAAGCAAAGGGGGTTATGAGAT 58.718 43.478 0.00 0.00 0.00 2.75
4440 16307 3.303351 AGCAAAGGGGGTTATGAGATG 57.697 47.619 0.00 0.00 0.00 2.90
4441 16308 2.091665 AGCAAAGGGGGTTATGAGATGG 60.092 50.000 0.00 0.00 0.00 3.51
4442 16309 2.358195 GCAAAGGGGGTTATGAGATGGT 60.358 50.000 0.00 0.00 0.00 3.55
4443 16310 3.290710 CAAAGGGGGTTATGAGATGGTG 58.709 50.000 0.00 0.00 0.00 4.17
4444 16311 2.587060 AGGGGGTTATGAGATGGTGA 57.413 50.000 0.00 0.00 0.00 4.02
4445 16312 2.858644 AGGGGGTTATGAGATGGTGAA 58.141 47.619 0.00 0.00 0.00 3.18
4446 16313 2.780010 AGGGGGTTATGAGATGGTGAAG 59.220 50.000 0.00 0.00 0.00 3.02
4447 16314 2.158608 GGGGGTTATGAGATGGTGAAGG 60.159 54.545 0.00 0.00 0.00 3.46
4448 16315 2.158608 GGGGTTATGAGATGGTGAAGGG 60.159 54.545 0.00 0.00 0.00 3.95
4449 16316 2.158608 GGGTTATGAGATGGTGAAGGGG 60.159 54.545 0.00 0.00 0.00 4.79
4450 16317 2.576615 GTTATGAGATGGTGAAGGGGC 58.423 52.381 0.00 0.00 0.00 5.80
4451 16318 0.758734 TATGAGATGGTGAAGGGGCG 59.241 55.000 0.00 0.00 0.00 6.13
4452 16319 1.274703 ATGAGATGGTGAAGGGGCGT 61.275 55.000 0.00 0.00 0.00 5.68
4453 16320 1.450312 GAGATGGTGAAGGGGCGTG 60.450 63.158 0.00 0.00 0.00 5.34
4454 16321 2.185310 GAGATGGTGAAGGGGCGTGT 62.185 60.000 0.00 0.00 0.00 4.49
4455 16322 0.907704 AGATGGTGAAGGGGCGTGTA 60.908 55.000 0.00 0.00 0.00 2.90
4456 16323 0.035820 GATGGTGAAGGGGCGTGTAA 60.036 55.000 0.00 0.00 0.00 2.41
4457 16324 0.322187 ATGGTGAAGGGGCGTGTAAC 60.322 55.000 0.00 0.00 0.00 2.50
4470 16337 1.240256 GTGTAACGGCCATTTGGACA 58.760 50.000 2.24 0.00 46.09 4.02
4471 16338 1.609555 GTGTAACGGCCATTTGGACAA 59.390 47.619 2.24 0.00 46.09 3.18
4472 16339 2.230266 GTGTAACGGCCATTTGGACAAT 59.770 45.455 2.24 0.00 46.09 2.71
4473 16340 2.230025 TGTAACGGCCATTTGGACAATG 59.770 45.455 2.24 0.00 46.09 2.82
4474 16341 1.337118 AACGGCCATTTGGACAATGT 58.663 45.000 2.24 0.00 46.09 2.71
4475 16342 0.887933 ACGGCCATTTGGACAATGTC 59.112 50.000 4.51 4.51 46.09 3.06
4476 16343 0.179166 CGGCCATTTGGACAATGTCG 60.179 55.000 7.35 0.00 46.09 4.35
4477 16344 1.173043 GGCCATTTGGACAATGTCGA 58.827 50.000 7.35 0.00 44.76 4.20
4478 16345 1.543802 GGCCATTTGGACAATGTCGAA 59.456 47.619 6.73 6.73 44.76 3.71
4479 16346 2.029470 GGCCATTTGGACAATGTCGAAA 60.029 45.455 22.13 22.13 44.76 3.46
4480 16347 3.553922 GGCCATTTGGACAATGTCGAAAA 60.554 43.478 23.30 17.89 44.76 2.29
4481 16348 4.244862 GCCATTTGGACAATGTCGAAAAT 58.755 39.130 23.30 19.07 41.80 1.82
4482 16349 4.327087 GCCATTTGGACAATGTCGAAAATC 59.673 41.667 23.30 13.39 41.80 2.17
4483 16350 4.558470 CCATTTGGACAATGTCGAAAATCG 59.442 41.667 23.30 15.65 41.80 3.34
4484 16351 5.618863 CCATTTGGACAATGTCGAAAATCGA 60.619 40.000 23.30 5.02 41.80 3.59
4485 16352 6.897136 CCATTTGGACAATGTCGAAAATCGAT 60.897 38.462 23.30 7.65 44.17 3.59
4486 16353 8.614504 CCATTTGGACAATGTCGAAAATCGATC 61.615 40.741 23.30 0.59 44.17 3.69
4495 16362 3.466836 TCGAAAATCGATCATCCCAAGG 58.533 45.455 0.00 0.00 44.82 3.61
4496 16363 3.133901 TCGAAAATCGATCATCCCAAGGA 59.866 43.478 0.00 0.00 44.82 3.36
4497 16364 3.876914 CGAAAATCGATCATCCCAAGGAA 59.123 43.478 0.00 0.00 43.74 3.36
4498 16365 4.260784 CGAAAATCGATCATCCCAAGGAAC 60.261 45.833 0.00 0.00 43.74 3.62
4499 16366 2.533266 ATCGATCATCCCAAGGAACG 57.467 50.000 0.00 0.00 34.34 3.95
4500 16367 1.480789 TCGATCATCCCAAGGAACGA 58.519 50.000 0.00 0.00 34.34 3.85
4501 16368 1.136305 TCGATCATCCCAAGGAACGAC 59.864 52.381 0.00 0.00 34.34 4.34
4502 16369 1.134818 CGATCATCCCAAGGAACGACA 60.135 52.381 0.00 0.00 34.34 4.35
4503 16370 2.483714 CGATCATCCCAAGGAACGACAT 60.484 50.000 0.00 0.00 34.34 3.06
4504 16371 3.545703 GATCATCCCAAGGAACGACATT 58.454 45.455 0.00 0.00 34.34 2.71
4505 16372 2.710377 TCATCCCAAGGAACGACATTG 58.290 47.619 0.00 0.00 39.57 2.82
4506 16373 2.304470 TCATCCCAAGGAACGACATTGA 59.696 45.455 11.57 0.00 41.97 2.57
4507 16374 2.940994 TCCCAAGGAACGACATTGAA 57.059 45.000 11.57 0.45 41.97 2.69
4508 16375 3.433306 TCCCAAGGAACGACATTGAAT 57.567 42.857 11.57 0.00 41.97 2.57
4509 16376 3.761897 TCCCAAGGAACGACATTGAATT 58.238 40.909 11.57 0.00 41.97 2.17
4510 16377 3.756434 TCCCAAGGAACGACATTGAATTC 59.244 43.478 11.57 0.00 41.97 2.17
4511 16378 3.426159 CCCAAGGAACGACATTGAATTCG 60.426 47.826 11.57 7.75 41.97 3.34
4512 16379 3.426159 CCAAGGAACGACATTGAATTCGG 60.426 47.826 11.57 0.00 41.97 4.30
4513 16380 1.737793 AGGAACGACATTGAATTCGGC 59.262 47.619 0.04 5.91 39.63 5.54
4514 16381 1.466950 GGAACGACATTGAATTCGGCA 59.533 47.619 0.04 0.00 39.63 5.69
4515 16382 2.097466 GGAACGACATTGAATTCGGCAT 59.903 45.455 0.04 0.00 39.63 4.40
4516 16383 3.354397 GAACGACATTGAATTCGGCATC 58.646 45.455 0.04 0.00 39.63 3.91
4517 16384 1.670811 ACGACATTGAATTCGGCATCC 59.329 47.619 0.04 0.00 39.63 3.51
4518 16385 1.002468 CGACATTGAATTCGGCATCCC 60.002 52.381 0.04 0.00 0.00 3.85
4536 16403 3.070576 GCGGCAGGCTTTCCCATT 61.071 61.111 0.00 0.00 39.11 3.16
4537 16404 2.649129 GCGGCAGGCTTTCCCATTT 61.649 57.895 0.00 0.00 39.11 2.32
4538 16405 1.216178 CGGCAGGCTTTCCCATTTG 59.784 57.895 0.00 0.00 35.39 2.32
4539 16406 1.535204 CGGCAGGCTTTCCCATTTGT 61.535 55.000 0.00 0.00 35.39 2.83
4540 16407 0.686789 GGCAGGCTTTCCCATTTGTT 59.313 50.000 0.00 0.00 35.39 2.83
4541 16408 1.072173 GGCAGGCTTTCCCATTTGTTT 59.928 47.619 0.00 0.00 35.39 2.83
4542 16409 2.416747 GCAGGCTTTCCCATTTGTTTC 58.583 47.619 0.00 0.00 35.39 2.78
4543 16410 2.037641 GCAGGCTTTCCCATTTGTTTCT 59.962 45.455 0.00 0.00 35.39 2.52
4544 16411 3.494924 GCAGGCTTTCCCATTTGTTTCTT 60.495 43.478 0.00 0.00 35.39 2.52
4545 16412 4.060205 CAGGCTTTCCCATTTGTTTCTTG 58.940 43.478 0.00 0.00 35.39 3.02
4546 16413 2.807967 GGCTTTCCCATTTGTTTCTTGC 59.192 45.455 0.00 0.00 0.00 4.01
4547 16414 2.476241 GCTTTCCCATTTGTTTCTTGCG 59.524 45.455 0.00 0.00 0.00 4.85
4548 16415 2.147436 TTCCCATTTGTTTCTTGCGC 57.853 45.000 0.00 0.00 0.00 6.09
4549 16416 1.035923 TCCCATTTGTTTCTTGCGCA 58.964 45.000 5.66 5.66 0.00 6.09
4550 16417 1.410517 TCCCATTTGTTTCTTGCGCAA 59.589 42.857 23.48 23.48 0.00 4.85
4551 16418 2.159043 TCCCATTTGTTTCTTGCGCAAA 60.159 40.909 25.01 12.30 36.68 3.68
4552 16419 2.807392 CCCATTTGTTTCTTGCGCAAAT 59.193 40.909 25.01 9.89 41.69 2.32
4553 16420 3.120580 CCCATTTGTTTCTTGCGCAAATC 60.121 43.478 25.01 14.17 39.79 2.17
4554 16421 3.742369 CCATTTGTTTCTTGCGCAAATCT 59.258 39.130 25.01 0.26 39.79 2.40
4555 16422 4.211794 CCATTTGTTTCTTGCGCAAATCTT 59.788 37.500 25.01 0.97 39.79 2.40
4556 16423 4.775440 TTTGTTTCTTGCGCAAATCTTG 57.225 36.364 25.01 12.17 0.00 3.02
4557 16424 3.435105 TGTTTCTTGCGCAAATCTTGT 57.565 38.095 25.01 0.00 0.00 3.16
4558 16425 3.779759 TGTTTCTTGCGCAAATCTTGTT 58.220 36.364 25.01 0.00 0.00 2.83
4559 16426 3.551082 TGTTTCTTGCGCAAATCTTGTTG 59.449 39.130 25.01 9.84 0.00 3.33
4560 16427 3.435105 TTCTTGCGCAAATCTTGTTGT 57.565 38.095 25.01 0.00 0.00 3.32
4561 16428 3.435105 TCTTGCGCAAATCTTGTTGTT 57.565 38.095 25.01 0.00 0.00 2.83
4562 16429 3.371168 TCTTGCGCAAATCTTGTTGTTC 58.629 40.909 25.01 0.00 0.00 3.18
4563 16430 3.066621 TCTTGCGCAAATCTTGTTGTTCT 59.933 39.130 25.01 0.00 0.00 3.01
4564 16431 2.998772 TGCGCAAATCTTGTTGTTCTC 58.001 42.857 8.16 0.00 0.00 2.87
4565 16432 2.618241 TGCGCAAATCTTGTTGTTCTCT 59.382 40.909 8.16 0.00 0.00 3.10
4566 16433 3.066621 TGCGCAAATCTTGTTGTTCTCTT 59.933 39.130 8.16 0.00 0.00 2.85
4567 16434 3.665871 GCGCAAATCTTGTTGTTCTCTTC 59.334 43.478 0.30 0.00 0.00 2.87
4568 16435 4.555511 GCGCAAATCTTGTTGTTCTCTTCT 60.556 41.667 0.30 0.00 0.00 2.85
4569 16436 5.334105 GCGCAAATCTTGTTGTTCTCTTCTA 60.334 40.000 0.30 0.00 0.00 2.10
4570 16437 6.658831 CGCAAATCTTGTTGTTCTCTTCTAA 58.341 36.000 0.00 0.00 0.00 2.10
4571 16438 7.301054 CGCAAATCTTGTTGTTCTCTTCTAAT 58.699 34.615 0.00 0.00 0.00 1.73
4572 16439 7.805071 CGCAAATCTTGTTGTTCTCTTCTAATT 59.195 33.333 0.00 0.00 0.00 1.40
4573 16440 9.468532 GCAAATCTTGTTGTTCTCTTCTAATTT 57.531 29.630 0.00 0.00 0.00 1.82
4576 16443 9.971922 AATCTTGTTGTTCTCTTCTAATTTTGG 57.028 29.630 0.00 0.00 0.00 3.28
4577 16444 8.746052 TCTTGTTGTTCTCTTCTAATTTTGGA 57.254 30.769 0.00 0.00 0.00 3.53
4578 16445 8.621286 TCTTGTTGTTCTCTTCTAATTTTGGAC 58.379 33.333 0.00 0.00 0.00 4.02
4579 16446 6.954944 TGTTGTTCTCTTCTAATTTTGGACG 58.045 36.000 0.00 0.00 0.00 4.79
4580 16447 6.540914 TGTTGTTCTCTTCTAATTTTGGACGT 59.459 34.615 0.00 0.00 0.00 4.34
4581 16448 6.539649 TGTTCTCTTCTAATTTTGGACGTG 57.460 37.500 0.00 0.00 0.00 4.49
4582 16449 6.053005 TGTTCTCTTCTAATTTTGGACGTGT 58.947 36.000 0.00 0.00 0.00 4.49
4583 16450 6.018262 TGTTCTCTTCTAATTTTGGACGTGTG 60.018 38.462 0.00 0.00 0.00 3.82
4584 16451 5.849510 TCTCTTCTAATTTTGGACGTGTGA 58.150 37.500 0.00 0.00 0.00 3.58
4585 16452 6.464222 TCTCTTCTAATTTTGGACGTGTGAT 58.536 36.000 0.00 0.00 0.00 3.06
4586 16453 6.934645 TCTCTTCTAATTTTGGACGTGTGATT 59.065 34.615 0.00 0.00 0.00 2.57
4587 16454 7.117812 TCTCTTCTAATTTTGGACGTGTGATTC 59.882 37.037 0.00 0.00 0.00 2.52
4588 16455 6.934645 TCTTCTAATTTTGGACGTGTGATTCT 59.065 34.615 0.00 0.00 0.00 2.40
4589 16456 6.480524 TCTAATTTTGGACGTGTGATTCTG 57.519 37.500 0.00 0.00 0.00 3.02
4590 16457 5.995282 TCTAATTTTGGACGTGTGATTCTGT 59.005 36.000 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.566858 AATTATGCGCTTGTTTTGTTTCTAG 57.433 32.000 9.73 0.00 0.00 2.43
1 2 8.293867 ACTAATTATGCGCTTGTTTTGTTTCTA 58.706 29.630 9.73 0.00 0.00 2.10
3 4 7.333288 ACTAATTATGCGCTTGTTTTGTTTC 57.667 32.000 9.73 0.00 0.00 2.78
4 5 7.307101 CCAACTAATTATGCGCTTGTTTTGTTT 60.307 33.333 9.73 0.00 0.00 2.83
7 8 5.633182 ACCAACTAATTATGCGCTTGTTTTG 59.367 36.000 9.73 4.67 0.00 2.44
116 117 5.936372 TCATTCTCAGTCACCATCAAAAGAG 59.064 40.000 0.00 0.00 0.00 2.85
117 118 5.702670 GTCATTCTCAGTCACCATCAAAAGA 59.297 40.000 0.00 0.00 0.00 2.52
170 7843 5.451662 GCTTACGTAGTGTATCGTTCTGAAG 59.548 44.000 0.00 0.00 45.73 3.02
172 7845 4.392754 TGCTTACGTAGTGTATCGTTCTGA 59.607 41.667 0.00 0.00 45.73 3.27
263 7936 8.693120 AAAGTCGTAGAACCATATGATAGAGA 57.307 34.615 3.65 0.00 39.69 3.10
264 7937 8.568794 TGAAAGTCGTAGAACCATATGATAGAG 58.431 37.037 3.65 0.00 39.69 2.43
271 7944 7.589958 AGATCTGAAAGTCGTAGAACCATAT 57.410 36.000 0.00 0.00 39.69 1.78
282 7955 6.813649 TCCAGTCAATTTAGATCTGAAAGTCG 59.186 38.462 5.18 0.00 33.76 4.18
289 7962 5.171476 ACGTGTCCAGTCAATTTAGATCTG 58.829 41.667 5.18 0.00 0.00 2.90
296 7969 9.261180 CATATATAGAACGTGTCCAGTCAATTT 57.739 33.333 0.00 0.00 0.00 1.82
302 7975 8.410673 AGAATCATATATAGAACGTGTCCAGT 57.589 34.615 0.00 0.00 0.00 4.00
303 7976 9.995957 CTAGAATCATATATAGAACGTGTCCAG 57.004 37.037 0.00 0.00 0.00 3.86
319 7992 7.884877 CCATGGACTTTATTGGCTAGAATCATA 59.115 37.037 5.56 0.00 0.00 2.15
320 7993 6.718454 CCATGGACTTTATTGGCTAGAATCAT 59.282 38.462 5.56 0.00 0.00 2.45
321 7994 6.064060 CCATGGACTTTATTGGCTAGAATCA 58.936 40.000 5.56 0.00 0.00 2.57
322 7995 6.064717 ACCATGGACTTTATTGGCTAGAATC 58.935 40.000 21.47 0.00 32.26 2.52
400 8073 2.616960 TCGTGATTCTGAATTGGACCG 58.383 47.619 4.11 3.67 0.00 4.79
430 8103 9.598517 TTCTTCATTTTAACATTTTGCAAGAGT 57.401 25.926 0.00 0.00 0.00 3.24
432 8105 9.598517 AGTTCTTCATTTTAACATTTTGCAAGA 57.401 25.926 0.00 0.00 0.00 3.02
454 8304 8.263940 TGCACTTATTAGTTTGGTATCAGTTC 57.736 34.615 0.00 0.00 30.26 3.01
560 8410 1.135689 CAACAAGGCACTAATCACGCC 60.136 52.381 0.00 0.00 46.62 5.68
563 8413 3.684788 ACGATCAACAAGGCACTAATCAC 59.315 43.478 0.00 0.00 38.49 3.06
707 8600 6.109156 TCACTAGCTAATTCTGTTTCCACA 57.891 37.500 0.00 0.00 0.00 4.17
741 8858 7.537596 TTGTTCCATCTTGTGTGGATAAATT 57.462 32.000 0.00 0.00 44.75 1.82
769 8886 8.426489 ACCAATTAGTACTGTCTTACTTTGACA 58.574 33.333 5.39 0.00 41.48 3.58
780 8900 2.597305 CGACGCACCAATTAGTACTGTC 59.403 50.000 5.39 0.00 0.00 3.51
786 8909 1.135199 ACGATCGACGCACCAATTAGT 60.135 47.619 24.34 0.00 46.94 2.24
789 8912 0.669318 ACACGATCGACGCACCAATT 60.669 50.000 24.34 0.00 46.94 2.32
1062 9346 3.684990 TCGCAGAAGTCGGCAGCT 61.685 61.111 4.36 0.00 36.87 4.24
1392 9682 2.069273 GTGACGTTCCTGATGTTCCAG 58.931 52.381 0.00 0.00 0.00 3.86
1534 9832 0.975887 TACACGTTGGGGTAGGTTCC 59.024 55.000 0.00 0.00 0.00 3.62
1535 9833 3.264947 GAATACACGTTGGGGTAGGTTC 58.735 50.000 0.00 0.00 0.00 3.62
1621 9919 2.154139 TGGTGGAGTTGACCATGCT 58.846 52.632 0.00 0.00 42.17 3.79
1764 10065 2.027625 CCTGCGTTTGGTCCGAGTC 61.028 63.158 0.00 0.00 0.00 3.36
1765 10066 2.030562 CCTGCGTTTGGTCCGAGT 59.969 61.111 0.00 0.00 0.00 4.18
1766 10067 1.738099 CTCCTGCGTTTGGTCCGAG 60.738 63.158 0.00 0.00 0.00 4.63
1816 10117 1.234615 GCTGCTGCCGTTACAAAGGA 61.235 55.000 3.85 0.00 0.00 3.36
1818 10119 1.154413 CGCTGCTGCCGTTACAAAG 60.154 57.895 10.24 0.00 35.36 2.77
1819 10120 1.440938 AACGCTGCTGCCGTTACAAA 61.441 50.000 18.60 0.00 35.44 2.83
1820 10121 1.440938 AAACGCTGCTGCCGTTACAA 61.441 50.000 19.70 0.00 35.88 2.41
1821 10122 1.837538 GAAACGCTGCTGCCGTTACA 61.838 55.000 19.70 0.00 35.88 2.41
1822 10123 1.154469 GAAACGCTGCTGCCGTTAC 60.154 57.895 19.70 3.47 35.88 2.50
1999 11207 6.090898 CGTCTCGATCCTTGAGTAACATTTTT 59.909 38.462 0.00 0.00 34.99 1.94
2001 11209 5.103000 CGTCTCGATCCTTGAGTAACATTT 58.897 41.667 0.00 0.00 34.99 2.32
2002 11210 4.158025 ACGTCTCGATCCTTGAGTAACATT 59.842 41.667 0.00 0.00 34.99 2.71
2003 11211 3.695060 ACGTCTCGATCCTTGAGTAACAT 59.305 43.478 0.00 0.00 34.99 2.71
2004 11212 3.079578 ACGTCTCGATCCTTGAGTAACA 58.920 45.455 0.00 0.00 34.99 2.41
2007 11215 1.400846 GCACGTCTCGATCCTTGAGTA 59.599 52.381 0.00 0.00 34.99 2.59
2008 11216 0.171455 GCACGTCTCGATCCTTGAGT 59.829 55.000 0.00 0.00 34.99 3.41
2009 11217 0.453793 AGCACGTCTCGATCCTTGAG 59.546 55.000 0.00 0.00 34.72 3.02
2010 11218 0.452184 GAGCACGTCTCGATCCTTGA 59.548 55.000 0.00 0.00 31.20 3.02
2011 11219 2.950877 GAGCACGTCTCGATCCTTG 58.049 57.895 0.00 0.00 31.20 3.61
2019 11227 1.488957 CAAACTGCGAGCACGTCTC 59.511 57.895 5.23 0.00 41.98 3.36
2200 11915 2.317973 AGGGACCGTATTAGGCTTCTC 58.682 52.381 0.00 0.00 33.69 2.87
2213 11928 4.137116 TCATCTTTCATACAAGGGACCG 57.863 45.455 0.00 0.00 0.00 4.79
2230 11945 5.675538 ACTAACTTATCAGCCAGGTTCATC 58.324 41.667 0.00 0.00 0.00 2.92
2261 13915 8.540507 TCATTGTAGTTAATCCTTCTCTAGCT 57.459 34.615 0.00 0.00 0.00 3.32
2262 13916 9.418045 GATCATTGTAGTTAATCCTTCTCTAGC 57.582 37.037 0.00 0.00 0.00 3.42
2263 13917 9.921637 GGATCATTGTAGTTAATCCTTCTCTAG 57.078 37.037 0.00 0.00 34.35 2.43
2264 13918 9.434275 TGGATCATTGTAGTTAATCCTTCTCTA 57.566 33.333 0.00 0.00 37.40 2.43
2278 13932 8.786898 TCTCTTCAAAAGTTTGGATCATTGTAG 58.213 33.333 4.04 0.00 38.66 2.74
2332 14017 1.673808 AACCGCTATCTCCGACCCAC 61.674 60.000 0.00 0.00 0.00 4.61
3110 14903 3.372206 GGATCTCAAGAATGACAACACCG 59.628 47.826 0.00 0.00 0.00 4.94
3220 15013 9.410556 TGAGAAGTAAAAGATAATTTTGCAAGC 57.589 29.630 0.00 0.00 0.00 4.01
3267 15100 4.406326 TGCCTGTTTGCAATTCCATCATAT 59.594 37.500 0.00 0.00 38.56 1.78
3350 15184 6.876257 ACCTCATTATCTTTGTTGAGTGACTC 59.124 38.462 5.47 5.47 35.01 3.36
3729 15564 1.699634 AGGTTGCTCCAAGTAGCTTCA 59.300 47.619 0.00 0.00 43.19 3.02
3848 15687 3.056250 ACATAATCAACCGCATTTGGCAA 60.056 39.130 0.00 0.00 45.17 4.52
3978 15841 1.073284 GCACCAAAACCACCTCCTCTA 59.927 52.381 0.00 0.00 0.00 2.43
4048 15912 3.698029 AAGGTGATTCATATTGCACGC 57.302 42.857 0.00 0.00 32.24 5.34
4092 15957 8.794553 CCCCTAACTATATATATACAGGAAGCG 58.205 40.741 15.74 2.59 0.00 4.68
4107 15972 5.244626 GCCACGATACTTTCCCCTAACTATA 59.755 44.000 0.00 0.00 0.00 1.31
4108 15973 4.040095 GCCACGATACTTTCCCCTAACTAT 59.960 45.833 0.00 0.00 0.00 2.12
4109 15974 3.385755 GCCACGATACTTTCCCCTAACTA 59.614 47.826 0.00 0.00 0.00 2.24
4110 15975 2.169978 GCCACGATACTTTCCCCTAACT 59.830 50.000 0.00 0.00 0.00 2.24
4111 15976 2.558378 GCCACGATACTTTCCCCTAAC 58.442 52.381 0.00 0.00 0.00 2.34
4112 15977 1.137479 CGCCACGATACTTTCCCCTAA 59.863 52.381 0.00 0.00 0.00 2.69
4113 15978 0.748450 CGCCACGATACTTTCCCCTA 59.252 55.000 0.00 0.00 0.00 3.53
4114 15979 1.520666 CGCCACGATACTTTCCCCT 59.479 57.895 0.00 0.00 0.00 4.79
4119 15984 0.896923 TGTACCCGCCACGATACTTT 59.103 50.000 0.00 0.00 0.00 2.66
4124 15989 0.468226 ATTCATGTACCCGCCACGAT 59.532 50.000 0.00 0.00 0.00 3.73
4125 15990 0.179094 GATTCATGTACCCGCCACGA 60.179 55.000 0.00 0.00 0.00 4.35
4127 15992 0.180406 AGGATTCATGTACCCGCCAC 59.820 55.000 0.00 0.00 0.00 5.01
4157 16024 3.071747 AGGACAAGGGACAGAAAGAGTTC 59.928 47.826 0.00 0.00 0.00 3.01
4237 16104 9.291664 CGTACTTTGGAAAGACTCTAATAAGAG 57.708 37.037 6.13 0.89 45.08 2.85
4238 16105 9.017509 TCGTACTTTGGAAAGACTCTAATAAGA 57.982 33.333 6.13 0.00 39.31 2.10
4239 16106 9.074443 GTCGTACTTTGGAAAGACTCTAATAAG 57.926 37.037 6.13 0.00 39.31 1.73
4240 16107 8.800332 AGTCGTACTTTGGAAAGACTCTAATAA 58.200 33.333 6.13 0.00 39.31 1.40
4241 16108 8.345724 AGTCGTACTTTGGAAAGACTCTAATA 57.654 34.615 6.13 0.00 39.31 0.98
4242 16109 7.229581 AGTCGTACTTTGGAAAGACTCTAAT 57.770 36.000 6.13 0.00 39.31 1.73
4243 16110 6.645790 AGTCGTACTTTGGAAAGACTCTAA 57.354 37.500 6.13 0.00 39.31 2.10
4244 16111 7.392673 ACATAGTCGTACTTTGGAAAGACTCTA 59.607 37.037 6.13 6.24 39.36 2.43
4245 16112 6.208994 ACATAGTCGTACTTTGGAAAGACTCT 59.791 38.462 6.13 4.74 39.36 3.24
4246 16113 6.308282 CACATAGTCGTACTTTGGAAAGACTC 59.692 42.308 6.13 0.00 39.36 3.36
4247 16114 6.157211 CACATAGTCGTACTTTGGAAAGACT 58.843 40.000 6.13 1.55 41.22 3.24
4248 16115 5.924825 ACACATAGTCGTACTTTGGAAAGAC 59.075 40.000 6.13 0.24 39.31 3.01
4249 16116 5.924254 CACACATAGTCGTACTTTGGAAAGA 59.076 40.000 6.13 0.00 39.31 2.52
4250 16117 5.120208 CCACACATAGTCGTACTTTGGAAAG 59.880 44.000 0.00 0.00 41.73 2.62
4251 16118 4.992319 CCACACATAGTCGTACTTTGGAAA 59.008 41.667 9.10 0.00 32.50 3.13
4252 16119 4.561938 CCCACACATAGTCGTACTTTGGAA 60.562 45.833 9.10 0.00 32.50 3.53
4253 16120 3.056393 CCCACACATAGTCGTACTTTGGA 60.056 47.826 9.10 0.00 32.50 3.53
4254 16121 3.259064 CCCACACATAGTCGTACTTTGG 58.741 50.000 9.10 0.00 32.50 3.28
4255 16122 3.921677 ACCCACACATAGTCGTACTTTG 58.078 45.455 0.00 0.00 34.08 2.77
4256 16123 4.612264 AACCCACACATAGTCGTACTTT 57.388 40.909 0.00 0.00 0.00 2.66
4257 16124 4.282703 AGAAACCCACACATAGTCGTACTT 59.717 41.667 0.00 0.00 0.00 2.24
4258 16125 3.830755 AGAAACCCACACATAGTCGTACT 59.169 43.478 0.00 0.00 0.00 2.73
4259 16126 4.184079 AGAAACCCACACATAGTCGTAC 57.816 45.455 0.00 0.00 0.00 3.67
4260 16127 5.255687 TCTAGAAACCCACACATAGTCGTA 58.744 41.667 0.00 0.00 0.00 3.43
4261 16128 4.084287 TCTAGAAACCCACACATAGTCGT 58.916 43.478 0.00 0.00 0.00 4.34
4262 16129 4.713824 TCTAGAAACCCACACATAGTCG 57.286 45.455 0.00 0.00 0.00 4.18
4263 16130 5.420409 CCTTCTAGAAACCCACACATAGTC 58.580 45.833 6.63 0.00 0.00 2.59
4264 16131 4.323562 GCCTTCTAGAAACCCACACATAGT 60.324 45.833 6.63 0.00 0.00 2.12
4265 16132 4.080863 AGCCTTCTAGAAACCCACACATAG 60.081 45.833 6.63 0.00 0.00 2.23
4266 16133 3.844211 AGCCTTCTAGAAACCCACACATA 59.156 43.478 6.63 0.00 0.00 2.29
4267 16134 2.644798 AGCCTTCTAGAAACCCACACAT 59.355 45.455 6.63 0.00 0.00 3.21
4268 16135 2.038557 GAGCCTTCTAGAAACCCACACA 59.961 50.000 6.63 0.00 0.00 3.72
4269 16136 2.615747 GGAGCCTTCTAGAAACCCACAC 60.616 54.545 6.63 0.00 0.00 3.82
4270 16137 1.628846 GGAGCCTTCTAGAAACCCACA 59.371 52.381 6.63 0.00 0.00 4.17
4271 16138 1.909986 AGGAGCCTTCTAGAAACCCAC 59.090 52.381 6.63 0.00 0.00 4.61
4272 16139 2.305927 CAAGGAGCCTTCTAGAAACCCA 59.694 50.000 6.63 0.00 33.42 4.51
4273 16140 2.356227 CCAAGGAGCCTTCTAGAAACCC 60.356 54.545 6.63 5.48 33.42 4.11
4274 16141 2.572104 TCCAAGGAGCCTTCTAGAAACC 59.428 50.000 6.63 7.86 33.42 3.27
4275 16142 3.983044 TCCAAGGAGCCTTCTAGAAAC 57.017 47.619 6.63 1.90 33.42 2.78
4276 16143 7.076446 ACTATATCCAAGGAGCCTTCTAGAAA 58.924 38.462 6.63 0.00 33.42 2.52
4277 16144 6.625267 ACTATATCCAAGGAGCCTTCTAGAA 58.375 40.000 4.81 4.81 33.42 2.10
4278 16145 6.220881 ACTATATCCAAGGAGCCTTCTAGA 57.779 41.667 0.00 0.00 33.42 2.43
4279 16146 7.179269 ACTACTATATCCAAGGAGCCTTCTAG 58.821 42.308 0.00 0.00 33.42 2.43
4280 16147 7.104974 ACTACTATATCCAAGGAGCCTTCTA 57.895 40.000 0.00 0.00 33.42 2.10
4281 16148 5.971493 ACTACTATATCCAAGGAGCCTTCT 58.029 41.667 0.00 0.00 33.42 2.85
4282 16149 6.042208 ACAACTACTATATCCAAGGAGCCTTC 59.958 42.308 0.00 0.00 33.42 3.46
4283 16150 5.905913 ACAACTACTATATCCAAGGAGCCTT 59.094 40.000 0.00 0.00 36.60 4.35
4284 16151 5.468658 ACAACTACTATATCCAAGGAGCCT 58.531 41.667 0.00 0.00 0.00 4.58
4285 16152 5.810080 ACAACTACTATATCCAAGGAGCC 57.190 43.478 0.00 0.00 0.00 4.70
4286 16153 7.014422 AGTGTACAACTACTATATCCAAGGAGC 59.986 40.741 0.00 0.00 37.36 4.70
4287 16154 8.466617 AGTGTACAACTACTATATCCAAGGAG 57.533 38.462 0.00 0.00 37.36 3.69
4302 16169 9.424319 CAATCTGAATACAAGTAGTGTACAACT 57.576 33.333 0.00 0.00 45.51 3.16
4303 16170 9.419297 TCAATCTGAATACAAGTAGTGTACAAC 57.581 33.333 0.00 0.00 45.51 3.32
4313 16180 9.995003 GGAGATAGAATCAATCTGAATACAAGT 57.005 33.333 0.00 0.00 39.30 3.16
4314 16181 9.138062 CGGAGATAGAATCAATCTGAATACAAG 57.862 37.037 0.00 0.00 39.30 3.16
4315 16182 8.090831 CCGGAGATAGAATCAATCTGAATACAA 58.909 37.037 0.00 0.00 39.30 2.41
4316 16183 7.233553 ACCGGAGATAGAATCAATCTGAATACA 59.766 37.037 9.46 0.00 39.30 2.29
4317 16184 7.543868 CACCGGAGATAGAATCAATCTGAATAC 59.456 40.741 9.46 0.00 39.30 1.89
4318 16185 7.310052 CCACCGGAGATAGAATCAATCTGAATA 60.310 40.741 9.46 0.00 39.30 1.75
4319 16186 6.462500 CACCGGAGATAGAATCAATCTGAAT 58.538 40.000 9.46 0.00 39.30 2.57
4320 16187 5.221521 CCACCGGAGATAGAATCAATCTGAA 60.222 44.000 9.46 0.00 39.30 3.02
4321 16188 4.281941 CCACCGGAGATAGAATCAATCTGA 59.718 45.833 9.46 0.00 39.30 3.27
4322 16189 4.564041 CCACCGGAGATAGAATCAATCTG 58.436 47.826 9.46 0.00 39.30 2.90
4323 16190 3.007398 GCCACCGGAGATAGAATCAATCT 59.993 47.826 9.46 0.00 42.48 2.40
4324 16191 3.244215 TGCCACCGGAGATAGAATCAATC 60.244 47.826 9.46 0.00 0.00 2.67
4325 16192 2.705658 TGCCACCGGAGATAGAATCAAT 59.294 45.455 9.46 0.00 0.00 2.57
4326 16193 2.115427 TGCCACCGGAGATAGAATCAA 58.885 47.619 9.46 0.00 0.00 2.57
4327 16194 1.412710 GTGCCACCGGAGATAGAATCA 59.587 52.381 9.46 0.00 0.00 2.57
4328 16195 1.689273 AGTGCCACCGGAGATAGAATC 59.311 52.381 9.46 0.00 0.00 2.52
4329 16196 1.689273 GAGTGCCACCGGAGATAGAAT 59.311 52.381 9.46 0.00 0.00 2.40
4330 16197 1.112113 GAGTGCCACCGGAGATAGAA 58.888 55.000 9.46 0.00 0.00 2.10
4331 16198 0.755698 GGAGTGCCACCGGAGATAGA 60.756 60.000 9.46 0.00 0.00 1.98
4332 16199 1.043116 TGGAGTGCCACCGGAGATAG 61.043 60.000 9.46 0.00 39.92 2.08
4333 16200 1.001120 TGGAGTGCCACCGGAGATA 59.999 57.895 9.46 0.00 39.92 1.98
4334 16201 2.284625 TGGAGTGCCACCGGAGAT 60.285 61.111 9.46 0.00 39.92 2.75
4343 16210 1.747355 CATCTCAACCAATGGAGTGCC 59.253 52.381 6.16 0.00 32.93 5.01
4344 16211 2.715046 TCATCTCAACCAATGGAGTGC 58.285 47.619 6.16 0.00 32.93 4.40
4345 16212 4.520179 TCATCATCTCAACCAATGGAGTG 58.480 43.478 6.16 3.65 32.93 3.51
4346 16213 4.849813 TCATCATCTCAACCAATGGAGT 57.150 40.909 6.16 0.00 32.93 3.85
4347 16214 4.023107 GCATCATCATCTCAACCAATGGAG 60.023 45.833 6.16 0.00 0.00 3.86
4348 16215 3.887110 GCATCATCATCTCAACCAATGGA 59.113 43.478 6.16 0.00 0.00 3.41
4349 16216 3.634910 TGCATCATCATCTCAACCAATGG 59.365 43.478 0.00 0.00 0.00 3.16
4350 16217 4.911514 TGCATCATCATCTCAACCAATG 57.088 40.909 0.00 0.00 0.00 2.82
4351 16218 4.215613 CGATGCATCATCATCTCAACCAAT 59.784 41.667 25.70 0.00 40.54 3.16
4352 16219 3.562557 CGATGCATCATCATCTCAACCAA 59.437 43.478 25.70 0.00 40.54 3.67
4353 16220 3.135994 CGATGCATCATCATCTCAACCA 58.864 45.455 25.70 0.00 40.54 3.67
4354 16221 3.396560 TCGATGCATCATCATCTCAACC 58.603 45.455 25.70 0.00 40.54 3.77
4355 16222 4.056740 ACTCGATGCATCATCATCTCAAC 58.943 43.478 25.70 0.00 40.54 3.18
4356 16223 4.332428 ACTCGATGCATCATCATCTCAA 57.668 40.909 25.70 0.00 40.54 3.02
4357 16224 4.332428 AACTCGATGCATCATCATCTCA 57.668 40.909 25.70 0.00 40.54 3.27
4358 16225 5.468592 ACTAACTCGATGCATCATCATCTC 58.531 41.667 25.70 0.00 40.54 2.75
4359 16226 5.465532 ACTAACTCGATGCATCATCATCT 57.534 39.130 25.70 7.71 40.54 2.90
4360 16227 5.464722 ACAACTAACTCGATGCATCATCATC 59.535 40.000 25.70 0.00 40.54 2.92
4361 16228 5.235831 CACAACTAACTCGATGCATCATCAT 59.764 40.000 25.70 11.61 40.54 2.45
4362 16229 4.567959 CACAACTAACTCGATGCATCATCA 59.432 41.667 25.70 8.49 40.54 3.07
4363 16230 4.025396 CCACAACTAACTCGATGCATCATC 60.025 45.833 25.70 1.19 37.50 2.92
4364 16231 3.873361 CCACAACTAACTCGATGCATCAT 59.127 43.478 25.70 11.28 0.00 2.45
4365 16232 3.261580 CCACAACTAACTCGATGCATCA 58.738 45.455 25.70 12.22 0.00 3.07
4366 16233 2.030946 GCCACAACTAACTCGATGCATC 59.969 50.000 17.10 17.10 0.00 3.91
4367 16234 2.009774 GCCACAACTAACTCGATGCAT 58.990 47.619 0.00 0.00 0.00 3.96
4368 16235 1.438651 GCCACAACTAACTCGATGCA 58.561 50.000 0.00 0.00 0.00 3.96
4369 16236 0.727398 GGCCACAACTAACTCGATGC 59.273 55.000 0.00 0.00 0.00 3.91
4370 16237 2.093306 TGGCCACAACTAACTCGATG 57.907 50.000 0.00 0.00 0.00 3.84
4371 16238 2.632377 CATGGCCACAACTAACTCGAT 58.368 47.619 8.16 0.00 0.00 3.59
4372 16239 1.338674 CCATGGCCACAACTAACTCGA 60.339 52.381 8.16 0.00 0.00 4.04
4373 16240 1.086696 CCATGGCCACAACTAACTCG 58.913 55.000 8.16 0.00 0.00 4.18
4374 16241 1.004277 TCCCATGGCCACAACTAACTC 59.996 52.381 8.16 0.00 0.00 3.01
4375 16242 1.004745 CTCCCATGGCCACAACTAACT 59.995 52.381 8.16 0.00 0.00 2.24
4376 16243 1.463674 CTCCCATGGCCACAACTAAC 58.536 55.000 8.16 0.00 0.00 2.34
4377 16244 0.331278 CCTCCCATGGCCACAACTAA 59.669 55.000 8.16 0.00 0.00 2.24
4378 16245 0.548926 TCCTCCCATGGCCACAACTA 60.549 55.000 8.16 0.00 0.00 2.24
4379 16246 1.852157 TCCTCCCATGGCCACAACT 60.852 57.895 8.16 0.00 0.00 3.16
4380 16247 1.379044 CTCCTCCCATGGCCACAAC 60.379 63.158 8.16 0.00 0.00 3.32
4381 16248 1.541118 TCTCCTCCCATGGCCACAA 60.541 57.895 8.16 0.00 0.00 3.33
4382 16249 1.997311 CTCTCCTCCCATGGCCACA 60.997 63.158 8.16 0.00 0.00 4.17
4383 16250 1.274703 TTCTCTCCTCCCATGGCCAC 61.275 60.000 8.16 0.00 0.00 5.01
4384 16251 0.549902 TTTCTCTCCTCCCATGGCCA 60.550 55.000 8.56 8.56 0.00 5.36
4385 16252 0.182299 CTTTCTCTCCTCCCATGGCC 59.818 60.000 6.09 0.00 0.00 5.36
4386 16253 1.207791 TCTTTCTCTCCTCCCATGGC 58.792 55.000 6.09 0.00 0.00 4.40
4387 16254 2.172293 CCTTCTTTCTCTCCTCCCATGG 59.828 54.545 4.14 4.14 0.00 3.66
4388 16255 3.110705 TCCTTCTTTCTCTCCTCCCATG 58.889 50.000 0.00 0.00 0.00 3.66
4389 16256 3.246314 ACTCCTTCTTTCTCTCCTCCCAT 60.246 47.826 0.00 0.00 0.00 4.00
4390 16257 2.112691 ACTCCTTCTTTCTCTCCTCCCA 59.887 50.000 0.00 0.00 0.00 4.37
4391 16258 2.499693 CACTCCTTCTTTCTCTCCTCCC 59.500 54.545 0.00 0.00 0.00 4.30
4392 16259 2.499693 CCACTCCTTCTTTCTCTCCTCC 59.500 54.545 0.00 0.00 0.00 4.30
4393 16260 2.499693 CCCACTCCTTCTTTCTCTCCTC 59.500 54.545 0.00 0.00 0.00 3.71
4394 16261 2.112691 TCCCACTCCTTCTTTCTCTCCT 59.887 50.000 0.00 0.00 0.00 3.69
4395 16262 2.499693 CTCCCACTCCTTCTTTCTCTCC 59.500 54.545 0.00 0.00 0.00 3.71
4396 16263 2.499693 CCTCCCACTCCTTCTTTCTCTC 59.500 54.545 0.00 0.00 0.00 3.20
4397 16264 2.112691 TCCTCCCACTCCTTCTTTCTCT 59.887 50.000 0.00 0.00 0.00 3.10
4398 16265 2.541466 TCCTCCCACTCCTTCTTTCTC 58.459 52.381 0.00 0.00 0.00 2.87
4399 16266 2.723530 TCCTCCCACTCCTTCTTTCT 57.276 50.000 0.00 0.00 0.00 2.52
4400 16267 3.680490 CTTTCCTCCCACTCCTTCTTTC 58.320 50.000 0.00 0.00 0.00 2.62
4401 16268 2.224892 GCTTTCCTCCCACTCCTTCTTT 60.225 50.000 0.00 0.00 0.00 2.52
4402 16269 1.352687 GCTTTCCTCCCACTCCTTCTT 59.647 52.381 0.00 0.00 0.00 2.52
4403 16270 0.988063 GCTTTCCTCCCACTCCTTCT 59.012 55.000 0.00 0.00 0.00 2.85
4404 16271 0.693049 TGCTTTCCTCCCACTCCTTC 59.307 55.000 0.00 0.00 0.00 3.46
4405 16272 1.149101 TTGCTTTCCTCCCACTCCTT 58.851 50.000 0.00 0.00 0.00 3.36
4406 16273 1.074566 CTTTGCTTTCCTCCCACTCCT 59.925 52.381 0.00 0.00 0.00 3.69
4407 16274 1.539157 CTTTGCTTTCCTCCCACTCC 58.461 55.000 0.00 0.00 0.00 3.85
4408 16275 1.539157 CCTTTGCTTTCCTCCCACTC 58.461 55.000 0.00 0.00 0.00 3.51
4409 16276 0.113190 CCCTTTGCTTTCCTCCCACT 59.887 55.000 0.00 0.00 0.00 4.00
4410 16277 0.900182 CCCCTTTGCTTTCCTCCCAC 60.900 60.000 0.00 0.00 0.00 4.61
4411 16278 1.464722 CCCCTTTGCTTTCCTCCCA 59.535 57.895 0.00 0.00 0.00 4.37
4412 16279 1.305297 CCCCCTTTGCTTTCCTCCC 60.305 63.158 0.00 0.00 0.00 4.30
4413 16280 0.178932 AACCCCCTTTGCTTTCCTCC 60.179 55.000 0.00 0.00 0.00 4.30
4414 16281 2.597578 TAACCCCCTTTGCTTTCCTC 57.402 50.000 0.00 0.00 0.00 3.71
4415 16282 2.381961 TCATAACCCCCTTTGCTTTCCT 59.618 45.455 0.00 0.00 0.00 3.36
4416 16283 2.760650 CTCATAACCCCCTTTGCTTTCC 59.239 50.000 0.00 0.00 0.00 3.13
4417 16284 3.697166 TCTCATAACCCCCTTTGCTTTC 58.303 45.455 0.00 0.00 0.00 2.62
4418 16285 3.825908 TCTCATAACCCCCTTTGCTTT 57.174 42.857 0.00 0.00 0.00 3.51
4419 16286 3.628257 CCATCTCATAACCCCCTTTGCTT 60.628 47.826 0.00 0.00 0.00 3.91
4420 16287 2.091665 CCATCTCATAACCCCCTTTGCT 60.092 50.000 0.00 0.00 0.00 3.91
4421 16288 2.310538 CCATCTCATAACCCCCTTTGC 58.689 52.381 0.00 0.00 0.00 3.68
4422 16289 3.053693 TCACCATCTCATAACCCCCTTTG 60.054 47.826 0.00 0.00 0.00 2.77
4423 16290 3.197983 TCACCATCTCATAACCCCCTTT 58.802 45.455 0.00 0.00 0.00 3.11
4424 16291 2.858644 TCACCATCTCATAACCCCCTT 58.141 47.619 0.00 0.00 0.00 3.95
4425 16292 2.587060 TCACCATCTCATAACCCCCT 57.413 50.000 0.00 0.00 0.00 4.79
4426 16293 2.158608 CCTTCACCATCTCATAACCCCC 60.159 54.545 0.00 0.00 0.00 5.40
4427 16294 2.158608 CCCTTCACCATCTCATAACCCC 60.159 54.545 0.00 0.00 0.00 4.95
4428 16295 2.158608 CCCCTTCACCATCTCATAACCC 60.159 54.545 0.00 0.00 0.00 4.11
4429 16296 2.749800 GCCCCTTCACCATCTCATAACC 60.750 54.545 0.00 0.00 0.00 2.85
4430 16297 2.576615 GCCCCTTCACCATCTCATAAC 58.423 52.381 0.00 0.00 0.00 1.89
4431 16298 1.140852 CGCCCCTTCACCATCTCATAA 59.859 52.381 0.00 0.00 0.00 1.90
4432 16299 0.758734 CGCCCCTTCACCATCTCATA 59.241 55.000 0.00 0.00 0.00 2.15
4433 16300 1.274703 ACGCCCCTTCACCATCTCAT 61.275 55.000 0.00 0.00 0.00 2.90
4434 16301 1.918293 ACGCCCCTTCACCATCTCA 60.918 57.895 0.00 0.00 0.00 3.27
4435 16302 1.450312 CACGCCCCTTCACCATCTC 60.450 63.158 0.00 0.00 0.00 2.75
4436 16303 0.907704 TACACGCCCCTTCACCATCT 60.908 55.000 0.00 0.00 0.00 2.90
4437 16304 0.035820 TTACACGCCCCTTCACCATC 60.036 55.000 0.00 0.00 0.00 3.51
4438 16305 0.322187 GTTACACGCCCCTTCACCAT 60.322 55.000 0.00 0.00 0.00 3.55
4439 16306 1.071814 GTTACACGCCCCTTCACCA 59.928 57.895 0.00 0.00 0.00 4.17
4440 16307 2.030958 CGTTACACGCCCCTTCACC 61.031 63.158 0.00 0.00 33.65 4.02
4441 16308 2.030958 CCGTTACACGCCCCTTCAC 61.031 63.158 0.00 0.00 40.91 3.18
4442 16309 2.344500 CCGTTACACGCCCCTTCA 59.656 61.111 0.00 0.00 40.91 3.02
4443 16310 3.122971 GCCGTTACACGCCCCTTC 61.123 66.667 0.00 0.00 40.91 3.46
4444 16311 4.710167 GGCCGTTACACGCCCCTT 62.710 66.667 0.00 0.00 40.91 3.95
4446 16313 4.789123 ATGGCCGTTACACGCCCC 62.789 66.667 7.82 0.00 38.49 5.80
4447 16314 2.337246 AAATGGCCGTTACACGCCC 61.337 57.895 11.50 0.00 39.88 6.13
4448 16315 1.154112 CAAATGGCCGTTACACGCC 60.154 57.895 11.50 3.75 40.91 5.68
4449 16316 1.154112 CCAAATGGCCGTTACACGC 60.154 57.895 11.50 0.00 40.91 5.34
4450 16317 0.167251 GTCCAAATGGCCGTTACACG 59.833 55.000 11.50 0.00 42.11 4.49
4451 16318 1.240256 TGTCCAAATGGCCGTTACAC 58.760 50.000 11.50 8.50 34.44 2.90
4452 16319 1.982660 TTGTCCAAATGGCCGTTACA 58.017 45.000 11.50 9.21 34.44 2.41
4453 16320 2.230266 ACATTGTCCAAATGGCCGTTAC 59.770 45.455 11.50 6.38 34.44 2.50
4454 16321 2.490115 GACATTGTCCAAATGGCCGTTA 59.510 45.455 11.50 0.00 34.44 3.18
4455 16322 1.272212 GACATTGTCCAAATGGCCGTT 59.728 47.619 3.71 3.71 34.44 4.44
4456 16323 0.887933 GACATTGTCCAAATGGCCGT 59.112 50.000 5.44 0.00 34.44 5.68
4457 16324 0.179166 CGACATTGTCCAAATGGCCG 60.179 55.000 11.12 2.86 32.03 6.13
4458 16325 1.173043 TCGACATTGTCCAAATGGCC 58.827 50.000 11.12 0.00 32.03 5.36
4459 16326 3.296322 TTTCGACATTGTCCAAATGGC 57.704 42.857 11.12 0.00 34.44 4.40
4460 16327 4.558470 CGATTTTCGACATTGTCCAAATGG 59.442 41.667 19.21 15.79 43.74 3.16
4461 16328 5.389778 TCGATTTTCGACATTGTCCAAATG 58.610 37.500 19.21 13.75 44.82 2.32
4462 16329 5.621197 TCGATTTTCGACATTGTCCAAAT 57.379 34.783 16.19 16.19 44.82 2.32
4475 16342 3.466836 TCCTTGGGATGATCGATTTTCG 58.533 45.455 0.00 0.00 42.10 3.46
4476 16343 4.260784 CGTTCCTTGGGATGATCGATTTTC 60.261 45.833 0.00 0.00 0.00 2.29
4477 16344 3.627577 CGTTCCTTGGGATGATCGATTTT 59.372 43.478 0.00 0.00 0.00 1.82
4478 16345 3.118408 TCGTTCCTTGGGATGATCGATTT 60.118 43.478 0.00 0.00 0.00 2.17
4479 16346 2.434336 TCGTTCCTTGGGATGATCGATT 59.566 45.455 0.00 0.00 0.00 3.34
4480 16347 2.039418 TCGTTCCTTGGGATGATCGAT 58.961 47.619 0.00 0.00 0.00 3.59
4481 16348 1.136305 GTCGTTCCTTGGGATGATCGA 59.864 52.381 0.00 0.00 0.00 3.59
4482 16349 1.134818 TGTCGTTCCTTGGGATGATCG 60.135 52.381 0.00 0.00 0.00 3.69
4483 16350 2.691409 TGTCGTTCCTTGGGATGATC 57.309 50.000 0.00 0.00 0.00 2.92
4484 16351 3.054434 TCAATGTCGTTCCTTGGGATGAT 60.054 43.478 0.00 0.00 0.00 2.45
4485 16352 2.304470 TCAATGTCGTTCCTTGGGATGA 59.696 45.455 0.00 0.00 0.00 2.92
4486 16353 2.710377 TCAATGTCGTTCCTTGGGATG 58.290 47.619 0.00 0.00 0.00 3.51
4487 16354 3.433306 TTCAATGTCGTTCCTTGGGAT 57.567 42.857 0.00 0.00 0.00 3.85
4488 16355 2.940994 TTCAATGTCGTTCCTTGGGA 57.059 45.000 0.00 0.00 0.00 4.37
4489 16356 3.426159 CGAATTCAATGTCGTTCCTTGGG 60.426 47.826 6.22 0.00 32.61 4.12
4490 16357 3.426159 CCGAATTCAATGTCGTTCCTTGG 60.426 47.826 6.22 0.00 35.48 3.61
4491 16358 3.747193 CCGAATTCAATGTCGTTCCTTG 58.253 45.455 6.22 0.00 35.48 3.61
4492 16359 2.161609 GCCGAATTCAATGTCGTTCCTT 59.838 45.455 6.22 0.00 35.48 3.36
4493 16360 1.737793 GCCGAATTCAATGTCGTTCCT 59.262 47.619 6.22 0.00 35.48 3.36
4494 16361 1.466950 TGCCGAATTCAATGTCGTTCC 59.533 47.619 6.22 0.00 35.48 3.62
4495 16362 2.892373 TGCCGAATTCAATGTCGTTC 57.108 45.000 6.22 0.00 35.48 3.95
4496 16363 2.097466 GGATGCCGAATTCAATGTCGTT 59.903 45.455 6.22 0.00 35.48 3.85
4497 16364 1.670811 GGATGCCGAATTCAATGTCGT 59.329 47.619 6.22 0.00 35.48 4.34
4498 16365 1.002468 GGGATGCCGAATTCAATGTCG 60.002 52.381 6.22 0.00 37.01 4.35
4499 16366 1.002468 CGGGATGCCGAATTCAATGTC 60.002 52.381 22.73 0.00 34.88 3.06
4500 16367 1.024271 CGGGATGCCGAATTCAATGT 58.976 50.000 22.73 0.00 34.88 2.71
4501 16368 0.318107 GCGGGATGCCGAATTCAATG 60.318 55.000 31.38 0.00 37.76 2.82
4502 16369 1.785041 CGCGGGATGCCGAATTCAAT 61.785 55.000 31.38 0.00 42.08 2.57
4503 16370 2.468670 CGCGGGATGCCGAATTCAA 61.469 57.895 31.38 0.00 42.08 2.69
4504 16371 2.894879 CGCGGGATGCCGAATTCA 60.895 61.111 31.38 0.00 42.08 2.57
4505 16372 3.649986 CCGCGGGATGCCGAATTC 61.650 66.667 31.38 10.55 42.08 2.17
4519 16386 2.649129 AAATGGGAAAGCCTGCCGC 61.649 57.895 0.00 0.00 38.74 6.53
4520 16387 1.216178 CAAATGGGAAAGCCTGCCG 59.784 57.895 0.00 0.00 38.74 5.69
4521 16388 0.686789 AACAAATGGGAAAGCCTGCC 59.313 50.000 0.00 0.00 35.64 4.85
4522 16389 2.037641 AGAAACAAATGGGAAAGCCTGC 59.962 45.455 0.00 0.00 0.00 4.85
4523 16390 4.060205 CAAGAAACAAATGGGAAAGCCTG 58.940 43.478 0.00 0.00 0.00 4.85
4524 16391 3.494924 GCAAGAAACAAATGGGAAAGCCT 60.495 43.478 0.00 0.00 0.00 4.58
4525 16392 2.807967 GCAAGAAACAAATGGGAAAGCC 59.192 45.455 0.00 0.00 0.00 4.35
4526 16393 2.476241 CGCAAGAAACAAATGGGAAAGC 59.524 45.455 0.00 0.00 43.02 3.51
4527 16394 2.476241 GCGCAAGAAACAAATGGGAAAG 59.524 45.455 0.30 0.00 43.02 2.62
4528 16395 2.159043 TGCGCAAGAAACAAATGGGAAA 60.159 40.909 8.16 0.00 43.02 3.13
4529 16396 1.410517 TGCGCAAGAAACAAATGGGAA 59.589 42.857 8.16 0.00 43.02 3.97
4530 16397 1.035923 TGCGCAAGAAACAAATGGGA 58.964 45.000 8.16 0.00 43.02 4.37
4531 16398 1.863267 TTGCGCAAGAAACAAATGGG 58.137 45.000 21.02 0.00 43.02 4.00
4532 16399 3.742369 AGATTTGCGCAAGAAACAAATGG 59.258 39.130 23.68 0.00 42.45 3.16
4533 16400 4.977741 AGATTTGCGCAAGAAACAAATG 57.022 36.364 23.68 0.00 42.45 2.32
4534 16401 4.810491 ACAAGATTTGCGCAAGAAACAAAT 59.190 33.333 23.68 11.99 44.44 2.32
4535 16402 4.180057 ACAAGATTTGCGCAAGAAACAAA 58.820 34.783 23.68 6.93 43.02 2.83
4536 16403 3.779759 ACAAGATTTGCGCAAGAAACAA 58.220 36.364 23.68 7.75 43.02 2.83
4537 16404 3.435105 ACAAGATTTGCGCAAGAAACA 57.565 38.095 23.68 8.58 43.02 2.83
4538 16405 3.551485 ACAACAAGATTTGCGCAAGAAAC 59.449 39.130 23.68 14.93 43.02 2.78
4539 16406 3.779759 ACAACAAGATTTGCGCAAGAAA 58.220 36.364 23.68 9.43 43.02 2.52
4540 16407 3.435105 ACAACAAGATTTGCGCAAGAA 57.565 38.095 23.68 10.27 43.02 2.52
4541 16408 3.066621 AGAACAACAAGATTTGCGCAAGA 59.933 39.130 23.68 14.55 43.02 3.02
4542 16409 3.374745 AGAACAACAAGATTTGCGCAAG 58.625 40.909 23.68 13.72 43.44 4.01
4543 16410 3.066621 AGAGAACAACAAGATTTGCGCAA 59.933 39.130 21.02 21.02 0.00 4.85
4544 16411 2.618241 AGAGAACAACAAGATTTGCGCA 59.382 40.909 5.66 5.66 0.00 6.09
4545 16412 3.273919 AGAGAACAACAAGATTTGCGC 57.726 42.857 0.00 0.00 0.00 6.09
4546 16413 5.100751 AGAAGAGAACAACAAGATTTGCG 57.899 39.130 0.00 0.00 0.00 4.85
4547 16414 9.468532 AAATTAGAAGAGAACAACAAGATTTGC 57.531 29.630 0.00 0.00 0.00 3.68
4550 16417 9.971922 CCAAAATTAGAAGAGAACAACAAGATT 57.028 29.630 0.00 0.00 0.00 2.40
4551 16418 9.354673 TCCAAAATTAGAAGAGAACAACAAGAT 57.645 29.630 0.00 0.00 0.00 2.40
4552 16419 8.621286 GTCCAAAATTAGAAGAGAACAACAAGA 58.379 33.333 0.00 0.00 0.00 3.02
4553 16420 7.587757 CGTCCAAAATTAGAAGAGAACAACAAG 59.412 37.037 0.00 0.00 0.00 3.16
4554 16421 7.066525 ACGTCCAAAATTAGAAGAGAACAACAA 59.933 33.333 0.00 0.00 0.00 2.83
4555 16422 6.540914 ACGTCCAAAATTAGAAGAGAACAACA 59.459 34.615 0.00 0.00 0.00 3.33
4556 16423 6.851330 CACGTCCAAAATTAGAAGAGAACAAC 59.149 38.462 0.00 0.00 0.00 3.32
4557 16424 6.540914 ACACGTCCAAAATTAGAAGAGAACAA 59.459 34.615 0.00 0.00 0.00 2.83
4558 16425 6.018262 CACACGTCCAAAATTAGAAGAGAACA 60.018 38.462 0.00 0.00 0.00 3.18
4559 16426 6.202188 TCACACGTCCAAAATTAGAAGAGAAC 59.798 38.462 0.00 0.00 0.00 3.01
4560 16427 6.285224 TCACACGTCCAAAATTAGAAGAGAA 58.715 36.000 0.00 0.00 0.00 2.87
4561 16428 5.849510 TCACACGTCCAAAATTAGAAGAGA 58.150 37.500 0.00 0.00 0.00 3.10
4562 16429 6.727824 ATCACACGTCCAAAATTAGAAGAG 57.272 37.500 0.00 0.00 0.00 2.85
4563 16430 6.934645 AGAATCACACGTCCAAAATTAGAAGA 59.065 34.615 0.00 0.00 0.00 2.87
4564 16431 7.017645 CAGAATCACACGTCCAAAATTAGAAG 58.982 38.462 0.00 0.00 0.00 2.85
4565 16432 6.485313 ACAGAATCACACGTCCAAAATTAGAA 59.515 34.615 0.00 0.00 0.00 2.10
4566 16433 5.995282 ACAGAATCACACGTCCAAAATTAGA 59.005 36.000 0.00 0.00 0.00 2.10
4567 16434 6.241207 ACAGAATCACACGTCCAAAATTAG 57.759 37.500 0.00 0.00 0.00 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.