Multiple sequence alignment - TraesCS3D01G036000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3D01G036000 | chr3D | 100.000 | 4451 | 0 | 0 | 1 | 4451 | 13102440 | 13106890 | 0.000000e+00 | 8220.0 |
1 | TraesCS3D01G036000 | chr3B | 89.596 | 3066 | 181 | 64 | 550 | 3543 | 18773032 | 18776031 | 0.000000e+00 | 3768.0 |
2 | TraesCS3D01G036000 | chr3B | 78.372 | 823 | 101 | 43 | 3548 | 4335 | 18776260 | 18777040 | 3.140000e-126 | 462.0 |
3 | TraesCS3D01G036000 | chr3B | 93.007 | 143 | 7 | 1 | 1112 | 1251 | 743801613 | 743801755 | 5.840000e-49 | 206.0 |
4 | TraesCS3D01G036000 | chr3B | 81.250 | 256 | 39 | 8 | 133 | 385 | 513534897 | 513535146 | 9.770000e-47 | 198.0 |
5 | TraesCS3D01G036000 | chr3B | 91.892 | 74 | 5 | 1 | 4378 | 4451 | 18777443 | 18777515 | 7.880000e-18 | 102.0 |
6 | TraesCS3D01G036000 | chr3A | 85.742 | 1571 | 133 | 55 | 488 | 2001 | 24209440 | 24207904 | 0.000000e+00 | 1576.0 |
7 | TraesCS3D01G036000 | chr3A | 90.846 | 721 | 53 | 5 | 2307 | 3023 | 24207499 | 24206788 | 0.000000e+00 | 953.0 |
8 | TraesCS3D01G036000 | chr3A | 94.990 | 519 | 23 | 3 | 3030 | 3546 | 24206752 | 24206235 | 0.000000e+00 | 811.0 |
9 | TraesCS3D01G036000 | chr3A | 80.969 | 289 | 43 | 6 | 99 | 380 | 436270190 | 436269907 | 7.500000e-53 | 219.0 |
10 | TraesCS3D01G036000 | chr3A | 77.600 | 250 | 42 | 10 | 825 | 1071 | 24211170 | 24210932 | 6.000000e-29 | 139.0 |
11 | TraesCS3D01G036000 | chr1D | 87.712 | 236 | 22 | 5 | 156 | 384 | 375980681 | 375980916 | 7.340000e-68 | 268.0 |
12 | TraesCS3D01G036000 | chr1D | 90.566 | 53 | 5 | 0 | 2574 | 2626 | 192570729 | 192570781 | 2.220000e-08 | 71.3 |
13 | TraesCS3D01G036000 | chr6A | 87.931 | 232 | 21 | 2 | 156 | 380 | 103306163 | 103305932 | 2.640000e-67 | 267.0 |
14 | TraesCS3D01G036000 | chr7A | 86.695 | 233 | 24 | 5 | 156 | 381 | 502237900 | 502238132 | 7.390000e-63 | 252.0 |
15 | TraesCS3D01G036000 | chr7A | 94.406 | 143 | 5 | 2 | 1112 | 1251 | 19709139 | 19708997 | 2.700000e-52 | 217.0 |
16 | TraesCS3D01G036000 | chr7A | 94.406 | 143 | 5 | 2 | 1112 | 1251 | 666583901 | 666584043 | 2.700000e-52 | 217.0 |
17 | TraesCS3D01G036000 | chr7A | 93.007 | 143 | 7 | 2 | 1112 | 1251 | 705146306 | 705146448 | 5.840000e-49 | 206.0 |
18 | TraesCS3D01G036000 | chr7A | 96.078 | 51 | 2 | 0 | 122 | 172 | 10877694 | 10877744 | 2.850000e-12 | 84.2 |
19 | TraesCS3D01G036000 | chr2D | 87.556 | 225 | 19 | 5 | 158 | 381 | 441833697 | 441833913 | 7.390000e-63 | 252.0 |
20 | TraesCS3D01G036000 | chr2D | 97.297 | 74 | 2 | 0 | 99 | 172 | 610169259 | 610169186 | 4.670000e-25 | 126.0 |
21 | TraesCS3D01G036000 | chr7B | 88.325 | 197 | 16 | 4 | 158 | 347 | 412935803 | 412935999 | 3.460000e-56 | 230.0 |
22 | TraesCS3D01G036000 | chr5B | 95.804 | 143 | 3 | 2 | 1112 | 1251 | 406044015 | 406043873 | 1.250000e-55 | 228.0 |
23 | TraesCS3D01G036000 | chr5B | 84.483 | 232 | 28 | 3 | 156 | 380 | 152229304 | 152229534 | 5.790000e-54 | 222.0 |
24 | TraesCS3D01G036000 | chr5B | 94.406 | 143 | 5 | 2 | 1112 | 1251 | 704089703 | 704089845 | 2.700000e-52 | 217.0 |
25 | TraesCS3D01G036000 | chr2A | 95.804 | 143 | 3 | 2 | 1112 | 1251 | 566450802 | 566450660 | 1.250000e-55 | 228.0 |
26 | TraesCS3D01G036000 | chr6D | 85.652 | 230 | 16 | 5 | 158 | 380 | 438297936 | 438297717 | 4.480000e-55 | 226.0 |
27 | TraesCS3D01G036000 | chr6B | 81.215 | 181 | 32 | 2 | 203 | 381 | 57900309 | 57900129 | 1.290000e-30 | 145.0 |
28 | TraesCS3D01G036000 | chr7D | 90.541 | 74 | 2 | 1 | 99 | 172 | 519193524 | 519193592 | 4.740000e-15 | 93.5 |
29 | TraesCS3D01G036000 | chr5A | 90.541 | 74 | 2 | 1 | 99 | 172 | 59647416 | 59647484 | 4.740000e-15 | 93.5 |
30 | TraesCS3D01G036000 | chr2B | 94.828 | 58 | 3 | 0 | 121 | 178 | 157297404 | 157297347 | 1.700000e-14 | 91.6 |
31 | TraesCS3D01G036000 | chr4A | 89.189 | 74 | 3 | 1 | 99 | 172 | 469047380 | 469047448 | 2.210000e-13 | 87.9 |
32 | TraesCS3D01G036000 | chr1A | 90.566 | 53 | 5 | 0 | 2574 | 2626 | 238679365 | 238679417 | 2.220000e-08 | 71.3 |
33 | TraesCS3D01G036000 | chr1A | 89.362 | 47 | 5 | 0 | 2579 | 2625 | 238673062 | 238673108 | 4.810000e-05 | 60.2 |
34 | TraesCS3D01G036000 | chr1B | 89.583 | 48 | 5 | 0 | 2579 | 2626 | 266110956 | 266111003 | 1.340000e-05 | 62.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3D01G036000 | chr3D | 13102440 | 13106890 | 4450 | False | 8220.00 | 8220 | 100.0000 | 1 | 4451 | 1 | chr3D.!!$F1 | 4450 |
1 | TraesCS3D01G036000 | chr3B | 18773032 | 18777515 | 4483 | False | 1444.00 | 3768 | 86.6200 | 550 | 4451 | 3 | chr3B.!!$F3 | 3901 |
2 | TraesCS3D01G036000 | chr3A | 24206235 | 24211170 | 4935 | True | 869.75 | 1576 | 87.2945 | 488 | 3546 | 4 | chr3A.!!$R2 | 3058 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
283 | 284 | 0.035176 | GCTTGATTTGCAGGCCCAAA | 59.965 | 50.000 | 9.27 | 9.27 | 43.24 | 3.28 | F |
1244 | 2538 | 0.035630 | CAGCAACCTCCTCCTCCTTG | 60.036 | 60.000 | 0.00 | 0.00 | 0.00 | 3.61 | F |
1254 | 2548 | 0.251634 | CTCCTCCTTGTTGCTCTCCC | 59.748 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 | F |
1281 | 2575 | 0.687354 | ACGCTTCAATCCACTGACCT | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 | F |
1714 | 3057 | 1.144708 | TGGTGCCTGGAATTTCAGTCA | 59.855 | 47.619 | 12.86 | 2.83 | 33.14 | 3.41 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1280 | 2574 | 0.108615 | ACGCCCTGAAGATCAACGAG | 60.109 | 55.000 | 0.00 | 0.0 | 0.00 | 4.18 | R |
3019 | 4524 | 1.553704 | TCAGCACATCAGAGCATGTCT | 59.446 | 47.619 | 0.00 | 0.0 | 34.60 | 3.41 | R |
3024 | 4529 | 2.845363 | TTCTTCAGCACATCAGAGCA | 57.155 | 45.000 | 0.00 | 0.0 | 33.43 | 4.26 | R |
3025 | 4530 | 3.688185 | TGAATTCTTCAGCACATCAGAGC | 59.312 | 43.478 | 7.05 | 0.0 | 34.08 | 4.09 | R |
3552 | 5312 | 1.468914 | GAAAACTGGACCGGATGCTTC | 59.531 | 52.381 | 9.46 | 0.0 | 0.00 | 3.86 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
47 | 48 | 3.965379 | TTGCTATTGGACTACCGTTGA | 57.035 | 42.857 | 0.00 | 0.00 | 39.42 | 3.18 |
48 | 49 | 3.965379 | TGCTATTGGACTACCGTTGAA | 57.035 | 42.857 | 0.00 | 0.00 | 39.42 | 2.69 |
50 | 51 | 3.512329 | TGCTATTGGACTACCGTTGAAGA | 59.488 | 43.478 | 0.00 | 0.00 | 39.42 | 2.87 |
52 | 53 | 3.611766 | ATTGGACTACCGTTGAAGAGG | 57.388 | 47.619 | 0.00 | 0.00 | 39.42 | 3.69 |
53 | 54 | 1.263356 | TGGACTACCGTTGAAGAGGG | 58.737 | 55.000 | 0.00 | 0.00 | 39.42 | 4.30 |
55 | 56 | 1.622312 | GGACTACCGTTGAAGAGGGTT | 59.378 | 52.381 | 0.00 | 0.00 | 43.86 | 4.11 |
56 | 57 | 2.038164 | GGACTACCGTTGAAGAGGGTTT | 59.962 | 50.000 | 0.00 | 0.00 | 43.86 | 3.27 |
57 | 58 | 3.495629 | GGACTACCGTTGAAGAGGGTTTT | 60.496 | 47.826 | 0.00 | 0.00 | 43.86 | 2.43 |
58 | 59 | 4.132336 | GACTACCGTTGAAGAGGGTTTTT | 58.868 | 43.478 | 0.00 | 0.00 | 43.86 | 1.94 |
59 | 60 | 5.294734 | ACTACCGTTGAAGAGGGTTTTTA | 57.705 | 39.130 | 0.00 | 0.00 | 43.86 | 1.52 |
60 | 61 | 5.303165 | ACTACCGTTGAAGAGGGTTTTTAG | 58.697 | 41.667 | 0.00 | 0.00 | 43.86 | 1.85 |
61 | 62 | 4.426736 | ACCGTTGAAGAGGGTTTTTAGA | 57.573 | 40.909 | 0.00 | 0.00 | 43.86 | 2.10 |
62 | 63 | 4.132336 | ACCGTTGAAGAGGGTTTTTAGAC | 58.868 | 43.478 | 0.00 | 0.00 | 43.86 | 2.59 |
63 | 64 | 3.501062 | CCGTTGAAGAGGGTTTTTAGACC | 59.499 | 47.826 | 0.00 | 0.00 | 39.04 | 3.85 |
71 | 72 | 4.452825 | GAGGGTTTTTAGACCTCCTATGC | 58.547 | 47.826 | 0.00 | 0.00 | 43.93 | 3.14 |
74 | 75 | 4.325109 | GGGTTTTTAGACCTCCTATGCCTT | 60.325 | 45.833 | 0.00 | 0.00 | 39.71 | 4.35 |
75 | 76 | 5.104235 | GGGTTTTTAGACCTCCTATGCCTTA | 60.104 | 44.000 | 0.00 | 0.00 | 39.71 | 2.69 |
76 | 77 | 6.420638 | GGTTTTTAGACCTCCTATGCCTTAA | 58.579 | 40.000 | 0.00 | 0.00 | 36.73 | 1.85 |
77 | 78 | 6.888088 | GGTTTTTAGACCTCCTATGCCTTAAA | 59.112 | 38.462 | 0.00 | 0.00 | 36.73 | 1.52 |
78 | 79 | 7.395206 | GGTTTTTAGACCTCCTATGCCTTAAAA | 59.605 | 37.037 | 0.00 | 0.00 | 36.73 | 1.52 |
79 | 80 | 8.799367 | GTTTTTAGACCTCCTATGCCTTAAAAA | 58.201 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
82 | 83 | 3.617284 | ACCTCCTATGCCTTAAAAACGG | 58.383 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
83 | 84 | 3.009805 | ACCTCCTATGCCTTAAAAACGGT | 59.990 | 43.478 | 0.00 | 0.00 | 0.00 | 4.83 |
84 | 85 | 4.225717 | ACCTCCTATGCCTTAAAAACGGTA | 59.774 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
85 | 86 | 5.104235 | ACCTCCTATGCCTTAAAAACGGTAT | 60.104 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
86 | 87 | 5.238650 | CCTCCTATGCCTTAAAAACGGTATG | 59.761 | 44.000 | 0.00 | 0.00 | 0.00 | 2.39 |
87 | 88 | 5.747342 | TCCTATGCCTTAAAAACGGTATGT | 58.253 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
88 | 89 | 5.587043 | TCCTATGCCTTAAAAACGGTATGTG | 59.413 | 40.000 | 0.00 | 0.00 | 0.00 | 3.21 |
89 | 90 | 3.562567 | TGCCTTAAAAACGGTATGTGC | 57.437 | 42.857 | 0.00 | 0.00 | 0.00 | 4.57 |
90 | 91 | 2.229302 | TGCCTTAAAAACGGTATGTGCC | 59.771 | 45.455 | 0.00 | 0.00 | 0.00 | 5.01 |
91 | 92 | 2.416296 | GCCTTAAAAACGGTATGTGCCC | 60.416 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
92 | 93 | 3.086282 | CCTTAAAAACGGTATGTGCCCT | 58.914 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
94 | 95 | 4.701171 | CCTTAAAAACGGTATGTGCCCTAA | 59.299 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
95 | 96 | 5.358725 | CCTTAAAAACGGTATGTGCCCTAAT | 59.641 | 40.000 | 0.00 | 0.00 | 0.00 | 1.73 |
96 | 97 | 6.543100 | CCTTAAAAACGGTATGTGCCCTAATA | 59.457 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
99 | 100 | 9.624373 | TTAAAAACGGTATGTGCCCTAATATTA | 57.376 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
100 | 101 | 8.700439 | AAAAACGGTATGTGCCCTAATATTAT | 57.300 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
101 | 102 | 9.796180 | AAAAACGGTATGTGCCCTAATATTATA | 57.204 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
105 | 106 | 8.038944 | ACGGTATGTGCCCTAATATTATACTTG | 58.961 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
106 | 107 | 7.494625 | CGGTATGTGCCCTAATATTATACTTGG | 59.505 | 40.741 | 0.00 | 0.00 | 0.00 | 3.61 |
107 | 108 | 7.282450 | GGTATGTGCCCTAATATTATACTTGGC | 59.718 | 40.741 | 0.00 | 4.79 | 38.13 | 4.52 |
109 | 110 | 5.073827 | TGTGCCCTAATATTATACTTGGCCA | 59.926 | 40.000 | 0.00 | 0.00 | 36.82 | 5.36 |
111 | 112 | 7.037225 | TGTGCCCTAATATTATACTTGGCCATA | 60.037 | 37.037 | 6.09 | 0.00 | 36.82 | 2.74 |
113 | 114 | 8.217799 | TGCCCTAATATTATACTTGGCCATATC | 58.782 | 37.037 | 6.09 | 0.00 | 36.82 | 1.63 |
116 | 117 | 9.698309 | CCTAATATTATACTTGGCCATATCTCG | 57.302 | 37.037 | 6.09 | 0.00 | 0.00 | 4.04 |
117 | 118 | 9.698309 | CTAATATTATACTTGGCCATATCTCGG | 57.302 | 37.037 | 6.09 | 0.00 | 0.00 | 4.63 |
123 | 124 | 4.394712 | GCCATATCTCGGGCCGGG | 62.395 | 72.222 | 27.98 | 25.48 | 44.53 | 5.73 |
124 | 125 | 4.394712 | CCATATCTCGGGCCGGGC | 62.395 | 72.222 | 27.98 | 22.00 | 0.00 | 6.13 |
155 | 156 | 3.680786 | GCCCGGTGCTGAAAACCC | 61.681 | 66.667 | 0.00 | 0.00 | 36.87 | 4.11 |
156 | 157 | 2.203422 | CCCGGTGCTGAAAACCCA | 60.203 | 61.111 | 0.00 | 0.00 | 33.88 | 4.51 |
157 | 158 | 2.268076 | CCCGGTGCTGAAAACCCAG | 61.268 | 63.158 | 0.00 | 0.00 | 33.88 | 4.45 |
158 | 159 | 2.268076 | CCGGTGCTGAAAACCCAGG | 61.268 | 63.158 | 0.00 | 0.00 | 33.88 | 4.45 |
159 | 160 | 2.919494 | CGGTGCTGAAAACCCAGGC | 61.919 | 63.158 | 0.00 | 0.00 | 33.88 | 4.85 |
161 | 162 | 2.203625 | TGCTGAAAACCCAGGCCC | 60.204 | 61.111 | 0.00 | 0.00 | 34.82 | 5.80 |
162 | 163 | 3.373565 | GCTGAAAACCCAGGCCCG | 61.374 | 66.667 | 0.00 | 0.00 | 34.82 | 6.13 |
164 | 165 | 1.675641 | CTGAAAACCCAGGCCCGAG | 60.676 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
165 | 166 | 3.062466 | GAAAACCCAGGCCCGAGC | 61.062 | 66.667 | 0.00 | 0.00 | 38.76 | 5.03 |
179 | 180 | 4.785453 | GAGCCCGGCCTGAACCTG | 62.785 | 72.222 | 5.55 | 0.00 | 0.00 | 4.00 |
182 | 183 | 3.646715 | CCCGGCCTGAACCTGGAA | 61.647 | 66.667 | 0.00 | 0.00 | 36.21 | 3.53 |
183 | 184 | 2.434331 | CCGGCCTGAACCTGGAAA | 59.566 | 61.111 | 0.00 | 0.00 | 0.00 | 3.13 |
184 | 185 | 1.228429 | CCGGCCTGAACCTGGAAAA | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 2.29 |
188 | 189 | 1.536073 | GCCTGAACCTGGAAAAGCCC | 61.536 | 60.000 | 0.00 | 0.00 | 34.97 | 5.19 |
189 | 190 | 1.244019 | CCTGAACCTGGAAAAGCCCG | 61.244 | 60.000 | 0.00 | 0.00 | 34.97 | 6.13 |
190 | 191 | 0.250727 | CTGAACCTGGAAAAGCCCGA | 60.251 | 55.000 | 0.00 | 0.00 | 34.97 | 5.14 |
191 | 192 | 0.536460 | TGAACCTGGAAAAGCCCGAC | 60.536 | 55.000 | 0.00 | 0.00 | 34.97 | 4.79 |
192 | 193 | 0.536460 | GAACCTGGAAAAGCCCGACA | 60.536 | 55.000 | 0.00 | 0.00 | 34.97 | 4.35 |
193 | 194 | 0.822121 | AACCTGGAAAAGCCCGACAC | 60.822 | 55.000 | 0.00 | 0.00 | 34.97 | 3.67 |
225 | 226 | 1.444836 | CGACCACGGCTAAAAATCCA | 58.555 | 50.000 | 0.00 | 0.00 | 35.72 | 3.41 |
227 | 228 | 2.422127 | CGACCACGGCTAAAAATCCATT | 59.578 | 45.455 | 0.00 | 0.00 | 35.72 | 3.16 |
228 | 229 | 3.119637 | CGACCACGGCTAAAAATCCATTT | 60.120 | 43.478 | 0.00 | 0.00 | 35.72 | 2.32 |
229 | 230 | 4.617298 | CGACCACGGCTAAAAATCCATTTT | 60.617 | 41.667 | 0.00 | 0.00 | 39.02 | 1.82 |
230 | 231 | 4.816392 | ACCACGGCTAAAAATCCATTTTC | 58.184 | 39.130 | 0.00 | 0.00 | 41.42 | 2.29 |
231 | 232 | 4.282195 | ACCACGGCTAAAAATCCATTTTCA | 59.718 | 37.500 | 0.00 | 0.00 | 41.42 | 2.69 |
233 | 234 | 5.226396 | CACGGCTAAAAATCCATTTTCACA | 58.774 | 37.500 | 0.00 | 0.00 | 41.42 | 3.58 |
237 | 238 | 4.631377 | GCTAAAAATCCATTTTCACAGGCC | 59.369 | 41.667 | 0.00 | 0.00 | 41.42 | 5.19 |
239 | 240 | 1.185315 | AATCCATTTTCACAGGCCCG | 58.815 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
240 | 241 | 0.331278 | ATCCATTTTCACAGGCCCGA | 59.669 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
241 | 242 | 0.322456 | TCCATTTTCACAGGCCCGAG | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
242 | 243 | 1.508088 | CATTTTCACAGGCCCGAGC | 59.492 | 57.895 | 0.00 | 0.00 | 38.76 | 5.03 |
273 | 274 | 3.187058 | CCCGTCGGGCTTGATTTG | 58.813 | 61.111 | 19.48 | 0.00 | 35.35 | 2.32 |
275 | 276 | 2.331893 | CCGTCGGGCTTGATTTGCA | 61.332 | 57.895 | 2.34 | 0.00 | 0.00 | 4.08 |
276 | 277 | 1.135315 | CGTCGGGCTTGATTTGCAG | 59.865 | 57.895 | 0.00 | 0.00 | 0.00 | 4.41 |
277 | 278 | 1.508088 | GTCGGGCTTGATTTGCAGG | 59.492 | 57.895 | 0.00 | 0.00 | 0.00 | 4.85 |
281 | 282 | 3.379880 | GCTTGATTTGCAGGCCCA | 58.620 | 55.556 | 0.00 | 0.00 | 43.24 | 5.36 |
282 | 283 | 1.672898 | GCTTGATTTGCAGGCCCAA | 59.327 | 52.632 | 0.00 | 0.00 | 43.24 | 4.12 |
283 | 284 | 0.035176 | GCTTGATTTGCAGGCCCAAA | 59.965 | 50.000 | 9.27 | 9.27 | 43.24 | 3.28 |
284 | 285 | 1.799544 | CTTGATTTGCAGGCCCAAAC | 58.200 | 50.000 | 9.07 | 5.18 | 37.51 | 2.93 |
285 | 286 | 0.396060 | TTGATTTGCAGGCCCAAACC | 59.604 | 50.000 | 9.07 | 0.91 | 37.51 | 3.27 |
286 | 287 | 1.296392 | GATTTGCAGGCCCAAACCC | 59.704 | 57.895 | 9.07 | 2.19 | 37.51 | 4.11 |
287 | 288 | 2.505635 | GATTTGCAGGCCCAAACCCG | 62.506 | 60.000 | 9.07 | 0.00 | 37.51 | 5.28 |
310 | 311 | 0.813610 | CGATGGCATGTTCGGGCTTA | 60.814 | 55.000 | 3.81 | 0.00 | 0.00 | 3.09 |
311 | 312 | 0.947244 | GATGGCATGTTCGGGCTTAG | 59.053 | 55.000 | 3.81 | 0.00 | 0.00 | 2.18 |
325 | 326 | 2.694616 | TTAGCCAGGCCCGGGATT | 60.695 | 61.111 | 29.31 | 8.31 | 0.00 | 3.01 |
326 | 327 | 2.284515 | CTTAGCCAGGCCCGGGATTT | 62.285 | 60.000 | 29.31 | 5.09 | 0.00 | 2.17 |
330 | 331 | 2.828549 | CAGGCCCGGGATTTTCGG | 60.829 | 66.667 | 29.31 | 4.28 | 46.43 | 4.30 |
335 | 336 | 2.828549 | CCGGGATTTTCGGGCTGG | 60.829 | 66.667 | 0.00 | 0.00 | 43.45 | 4.85 |
336 | 337 | 2.828549 | CGGGATTTTCGGGCTGGG | 60.829 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
337 | 338 | 2.359011 | GGGATTTTCGGGCTGGGT | 59.641 | 61.111 | 0.00 | 0.00 | 0.00 | 4.51 |
338 | 339 | 1.753078 | GGGATTTTCGGGCTGGGTC | 60.753 | 63.158 | 0.00 | 0.00 | 0.00 | 4.46 |
340 | 341 | 2.045340 | ATTTTCGGGCTGGGTCGG | 60.045 | 61.111 | 0.00 | 0.00 | 0.00 | 4.79 |
380 | 381 | 4.468689 | GCCCGTGGCCAGGTCTAC | 62.469 | 72.222 | 23.21 | 6.59 | 44.06 | 2.59 |
381 | 382 | 3.782443 | CCCGTGGCCAGGTCTACC | 61.782 | 72.222 | 23.21 | 0.62 | 0.00 | 3.18 |
385 | 386 | 1.120530 | CGTGGCCAGGTCTACCTATT | 58.879 | 55.000 | 17.47 | 0.00 | 46.65 | 1.73 |
387 | 388 | 2.897969 | CGTGGCCAGGTCTACCTATTAT | 59.102 | 50.000 | 17.47 | 0.00 | 46.65 | 1.28 |
388 | 389 | 4.084287 | CGTGGCCAGGTCTACCTATTATA | 58.916 | 47.826 | 17.47 | 0.00 | 46.65 | 0.98 |
389 | 390 | 4.710375 | CGTGGCCAGGTCTACCTATTATAT | 59.290 | 45.833 | 17.47 | 0.00 | 46.65 | 0.86 |
390 | 391 | 5.394224 | CGTGGCCAGGTCTACCTATTATATG | 60.394 | 48.000 | 17.47 | 0.00 | 46.65 | 1.78 |
391 | 392 | 5.030147 | TGGCCAGGTCTACCTATTATATGG | 58.970 | 45.833 | 0.00 | 0.00 | 46.65 | 2.74 |
393 | 394 | 4.717280 | GCCAGGTCTACCTATTATATGGCT | 59.283 | 45.833 | 15.43 | 0.00 | 46.65 | 4.75 |
394 | 395 | 5.395768 | GCCAGGTCTACCTATTATATGGCTG | 60.396 | 48.000 | 15.43 | 0.00 | 46.65 | 4.85 |
395 | 396 | 5.395768 | CCAGGTCTACCTATTATATGGCTGC | 60.396 | 48.000 | 0.25 | 0.00 | 46.65 | 5.25 |
397 | 398 | 6.607600 | CAGGTCTACCTATTATATGGCTGCTA | 59.392 | 42.308 | 0.25 | 0.00 | 46.65 | 3.49 |
400 | 401 | 7.928706 | GGTCTACCTATTATATGGCTGCTATTG | 59.071 | 40.741 | 3.18 | 0.00 | 0.00 | 1.90 |
401 | 402 | 7.928706 | GTCTACCTATTATATGGCTGCTATTGG | 59.071 | 40.741 | 3.18 | 0.95 | 0.00 | 3.16 |
403 | 404 | 6.893583 | ACCTATTATATGGCTGCTATTGGAG | 58.106 | 40.000 | 3.18 | 0.00 | 34.56 | 3.86 |
404 | 405 | 6.673978 | ACCTATTATATGGCTGCTATTGGAGA | 59.326 | 38.462 | 3.18 | 0.00 | 33.10 | 3.71 |
405 | 406 | 7.349330 | ACCTATTATATGGCTGCTATTGGAGAT | 59.651 | 37.037 | 3.18 | 0.00 | 33.10 | 2.75 |
406 | 407 | 7.660617 | CCTATTATATGGCTGCTATTGGAGATG | 59.339 | 40.741 | 3.18 | 0.00 | 33.10 | 2.90 |
407 | 408 | 1.906990 | ATGGCTGCTATTGGAGATGC | 58.093 | 50.000 | 0.00 | 0.00 | 33.10 | 3.91 |
409 | 410 | 1.202734 | TGGCTGCTATTGGAGATGCTC | 60.203 | 52.381 | 0.00 | 0.00 | 33.10 | 4.26 |
410 | 411 | 1.072015 | GGCTGCTATTGGAGATGCTCT | 59.928 | 52.381 | 0.00 | 0.00 | 33.10 | 4.09 |
411 | 412 | 2.301296 | GGCTGCTATTGGAGATGCTCTA | 59.699 | 50.000 | 0.00 | 0.00 | 33.10 | 2.43 |
414 | 415 | 3.982475 | TGCTATTGGAGATGCTCTAACG | 58.018 | 45.455 | 0.00 | 0.00 | 34.03 | 3.18 |
415 | 416 | 3.243873 | TGCTATTGGAGATGCTCTAACGG | 60.244 | 47.826 | 0.00 | 0.00 | 34.03 | 4.44 |
416 | 417 | 2.918712 | ATTGGAGATGCTCTAACGGG | 57.081 | 50.000 | 0.00 | 0.00 | 34.03 | 5.28 |
417 | 418 | 0.178068 | TTGGAGATGCTCTAACGGGC | 59.822 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
418 | 419 | 1.300233 | GGAGATGCTCTAACGGGCG | 60.300 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
420 | 421 | 0.595310 | GAGATGCTCTAACGGGCGAC | 60.595 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
421 | 422 | 1.141019 | GATGCTCTAACGGGCGACA | 59.859 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
422 | 423 | 1.146358 | GATGCTCTAACGGGCGACAC | 61.146 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
424 | 425 | 2.092882 | GCTCTAACGGGCGACACAC | 61.093 | 63.158 | 0.00 | 0.00 | 0.00 | 3.82 |
425 | 426 | 1.585006 | CTCTAACGGGCGACACACT | 59.415 | 57.895 | 0.00 | 0.00 | 0.00 | 3.55 |
426 | 427 | 0.038526 | CTCTAACGGGCGACACACTT | 60.039 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
427 | 428 | 0.319211 | TCTAACGGGCGACACACTTG | 60.319 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
428 | 429 | 0.599204 | CTAACGGGCGACACACTTGT | 60.599 | 55.000 | 0.00 | 0.00 | 39.32 | 3.16 |
438 | 439 | 3.706055 | CACACTTGTGCTACCCTGT | 57.294 | 52.632 | 0.10 | 0.00 | 39.39 | 4.00 |
439 | 440 | 1.229428 | CACACTTGTGCTACCCTGTG | 58.771 | 55.000 | 0.10 | 0.00 | 39.39 | 3.66 |
440 | 441 | 0.837272 | ACACTTGTGCTACCCTGTGT | 59.163 | 50.000 | 0.10 | 0.00 | 34.38 | 3.72 |
443 | 444 | 1.202651 | ACTTGTGCTACCCTGTGTGTC | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
445 | 446 | 0.105964 | TGTGCTACCCTGTGTGTCAC | 59.894 | 55.000 | 0.00 | 0.00 | 33.68 | 3.67 |
446 | 447 | 0.944311 | GTGCTACCCTGTGTGTCACG | 60.944 | 60.000 | 0.00 | 0.00 | 37.14 | 4.35 |
447 | 448 | 1.366366 | GCTACCCTGTGTGTCACGT | 59.634 | 57.895 | 0.00 | 0.00 | 37.14 | 4.49 |
448 | 449 | 0.666577 | GCTACCCTGTGTGTCACGTC | 60.667 | 60.000 | 0.00 | 0.00 | 37.14 | 4.34 |
450 | 451 | 2.410638 | TACCCTGTGTGTCACGTCGC | 62.411 | 60.000 | 0.00 | 0.00 | 37.14 | 5.19 |
451 | 452 | 2.027605 | CCTGTGTGTCACGTCGCT | 59.972 | 61.111 | 0.00 | 0.00 | 37.14 | 4.93 |
452 | 453 | 2.302952 | CCTGTGTGTCACGTCGCTG | 61.303 | 63.158 | 0.00 | 0.00 | 37.14 | 5.18 |
453 | 454 | 1.299089 | CTGTGTGTCACGTCGCTGA | 60.299 | 57.895 | 0.00 | 0.00 | 37.14 | 4.26 |
455 | 456 | 0.249280 | TGTGTGTCACGTCGCTGATT | 60.249 | 50.000 | 0.00 | 0.00 | 37.14 | 2.57 |
457 | 458 | 0.249280 | TGTGTCACGTCGCTGATTGT | 60.249 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
458 | 459 | 0.435008 | GTGTCACGTCGCTGATTGTC | 59.565 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
459 | 460 | 0.313987 | TGTCACGTCGCTGATTGTCT | 59.686 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
461 | 462 | 2.030628 | TGTCACGTCGCTGATTGTCTTA | 60.031 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
464 | 465 | 3.427528 | TCACGTCGCTGATTGTCTTAAAC | 59.572 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
465 | 466 | 2.735134 | ACGTCGCTGATTGTCTTAAACC | 59.265 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
466 | 467 | 2.993899 | CGTCGCTGATTGTCTTAAACCT | 59.006 | 45.455 | 0.00 | 0.00 | 0.00 | 3.50 |
467 | 468 | 3.181530 | CGTCGCTGATTGTCTTAAACCTG | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
469 | 470 | 4.213482 | GTCGCTGATTGTCTTAAACCTGTT | 59.787 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
471 | 472 | 5.992829 | TCGCTGATTGTCTTAAACCTGTTTA | 59.007 | 36.000 | 0.00 | 0.00 | 34.23 | 2.01 |
474 | 475 | 6.548441 | TGATTGTCTTAAACCTGTTTACCG | 57.452 | 37.500 | 2.08 | 0.00 | 35.05 | 4.02 |
475 | 476 | 5.470777 | TGATTGTCTTAAACCTGTTTACCGG | 59.529 | 40.000 | 0.00 | 0.00 | 35.05 | 5.28 |
476 | 477 | 4.420522 | TGTCTTAAACCTGTTTACCGGT | 57.579 | 40.909 | 13.98 | 13.98 | 35.05 | 5.28 |
483 | 484 | 4.374843 | AACCTGTTTACCGGTTTGTTTC | 57.625 | 40.909 | 15.04 | 0.00 | 40.47 | 2.78 |
484 | 485 | 3.354467 | ACCTGTTTACCGGTTTGTTTCA | 58.646 | 40.909 | 15.04 | 3.45 | 0.00 | 2.69 |
486 | 487 | 4.037089 | ACCTGTTTACCGGTTTGTTTCATC | 59.963 | 41.667 | 15.04 | 0.00 | 0.00 | 2.92 |
487 | 488 | 4.036971 | CCTGTTTACCGGTTTGTTTCATCA | 59.963 | 41.667 | 15.04 | 0.00 | 0.00 | 3.07 |
488 | 489 | 5.450688 | CCTGTTTACCGGTTTGTTTCATCAA | 60.451 | 40.000 | 15.04 | 0.00 | 0.00 | 2.57 |
489 | 490 | 5.962433 | TGTTTACCGGTTTGTTTCATCAAA | 58.038 | 33.333 | 15.04 | 0.00 | 35.36 | 2.69 |
490 | 491 | 6.574350 | TGTTTACCGGTTTGTTTCATCAAAT | 58.426 | 32.000 | 15.04 | 0.00 | 39.09 | 2.32 |
491 | 492 | 6.477033 | TGTTTACCGGTTTGTTTCATCAAATG | 59.523 | 34.615 | 15.04 | 0.00 | 39.09 | 2.32 |
492 | 493 | 4.927978 | ACCGGTTTGTTTCATCAAATGA | 57.072 | 36.364 | 0.00 | 0.00 | 39.09 | 2.57 |
534 | 1782 | 6.127730 | GCCCCTCAATTCGAAAAGAAAATAGA | 60.128 | 38.462 | 0.00 | 0.00 | 42.91 | 1.98 |
535 | 1783 | 7.576856 | GCCCCTCAATTCGAAAAGAAAATAGAA | 60.577 | 37.037 | 0.00 | 0.00 | 42.91 | 2.10 |
536 | 1784 | 7.970614 | CCCCTCAATTCGAAAAGAAAATAGAAG | 59.029 | 37.037 | 0.00 | 0.00 | 42.91 | 2.85 |
537 | 1785 | 7.486232 | CCCTCAATTCGAAAAGAAAATAGAAGC | 59.514 | 37.037 | 0.00 | 0.00 | 42.91 | 3.86 |
538 | 1786 | 8.239998 | CCTCAATTCGAAAAGAAAATAGAAGCT | 58.760 | 33.333 | 0.00 | 0.00 | 42.91 | 3.74 |
539 | 1787 | 9.271738 | CTCAATTCGAAAAGAAAATAGAAGCTC | 57.728 | 33.333 | 0.00 | 0.00 | 42.91 | 4.09 |
540 | 1788 | 8.237267 | TCAATTCGAAAAGAAAATAGAAGCTCC | 58.763 | 33.333 | 0.00 | 0.00 | 42.91 | 4.70 |
541 | 1789 | 7.929941 | ATTCGAAAAGAAAATAGAAGCTCCT | 57.070 | 32.000 | 0.00 | 0.00 | 42.91 | 3.69 |
543 | 1791 | 5.875359 | TCGAAAAGAAAATAGAAGCTCCTCC | 59.125 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
544 | 1792 | 5.220491 | CGAAAAGAAAATAGAAGCTCCTCCG | 60.220 | 44.000 | 0.00 | 0.00 | 0.00 | 4.63 |
546 | 1794 | 5.622346 | AAGAAAATAGAAGCTCCTCCGAT | 57.378 | 39.130 | 0.00 | 0.00 | 0.00 | 4.18 |
547 | 1795 | 4.954875 | AGAAAATAGAAGCTCCTCCGATG | 58.045 | 43.478 | 0.00 | 0.00 | 0.00 | 3.84 |
548 | 1796 | 4.651503 | AGAAAATAGAAGCTCCTCCGATGA | 59.348 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
549 | 1797 | 5.129485 | AGAAAATAGAAGCTCCTCCGATGAA | 59.871 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
550 | 1798 | 4.599047 | AATAGAAGCTCCTCCGATGAAG | 57.401 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
700 | 1960 | 1.069500 | CGGTTGACGTTGAATTCCACC | 60.069 | 52.381 | 2.27 | 0.00 | 37.93 | 4.61 |
802 | 2089 | 2.495270 | ACAGAGAGTGGTATGTGAGCAG | 59.505 | 50.000 | 0.00 | 0.00 | 35.85 | 4.24 |
803 | 2090 | 2.757314 | CAGAGAGTGGTATGTGAGCAGA | 59.243 | 50.000 | 0.00 | 0.00 | 35.85 | 4.26 |
804 | 2091 | 3.023119 | AGAGAGTGGTATGTGAGCAGAG | 58.977 | 50.000 | 0.00 | 0.00 | 35.85 | 3.35 |
805 | 2092 | 1.480137 | AGAGTGGTATGTGAGCAGAGC | 59.520 | 52.381 | 0.00 | 0.00 | 35.85 | 4.09 |
806 | 2093 | 1.205655 | GAGTGGTATGTGAGCAGAGCA | 59.794 | 52.381 | 0.00 | 0.00 | 41.27 | 4.26 |
926 | 2214 | 4.135153 | GAGCGAGCGAGCAGGGAA | 62.135 | 66.667 | 9.01 | 0.00 | 40.15 | 3.97 |
927 | 2215 | 4.140599 | AGCGAGCGAGCAGGGAAG | 62.141 | 66.667 | 9.01 | 0.00 | 40.15 | 3.46 |
928 | 2216 | 4.443266 | GCGAGCGAGCAGGGAAGT | 62.443 | 66.667 | 0.00 | 0.00 | 37.05 | 3.01 |
943 | 2231 | 2.614229 | GGGAAGTCTTTCTCTGCTGTCC | 60.614 | 54.545 | 0.00 | 0.00 | 30.74 | 4.02 |
984 | 2274 | 3.181449 | TGGTCTTTGGTTGTGCTAGCTAA | 60.181 | 43.478 | 17.23 | 8.54 | 0.00 | 3.09 |
989 | 2279 | 1.616865 | TGGTTGTGCTAGCTAACTCGT | 59.383 | 47.619 | 24.50 | 0.00 | 0.00 | 4.18 |
1182 | 2476 | 1.446272 | CTTCTCCGACGGCAACCTC | 60.446 | 63.158 | 9.66 | 0.00 | 0.00 | 3.85 |
1226 | 2520 | 0.320421 | GTCTACAAGGCAAGCGACCA | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1227 | 2521 | 0.037326 | TCTACAAGGCAAGCGACCAG | 60.037 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1238 | 2532 | 2.266055 | CGACCAGCAACCTCCTCC | 59.734 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
1241 | 2535 | 1.904990 | GACCAGCAACCTCCTCCTCC | 61.905 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1242 | 2536 | 1.614824 | CCAGCAACCTCCTCCTCCT | 60.615 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
1243 | 2537 | 1.204113 | CCAGCAACCTCCTCCTCCTT | 61.204 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1244 | 2538 | 0.035630 | CAGCAACCTCCTCCTCCTTG | 60.036 | 60.000 | 0.00 | 0.00 | 0.00 | 3.61 |
1246 | 2540 | 0.402121 | GCAACCTCCTCCTCCTTGTT | 59.598 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
1247 | 2541 | 1.884067 | GCAACCTCCTCCTCCTTGTTG | 60.884 | 57.143 | 0.00 | 0.00 | 36.92 | 3.33 |
1248 | 2542 | 0.402121 | AACCTCCTCCTCCTTGTTGC | 59.598 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
1249 | 2543 | 0.474660 | ACCTCCTCCTCCTTGTTGCT | 60.475 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
1251 | 2545 | 1.274712 | CTCCTCCTCCTTGTTGCTCT | 58.725 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
1254 | 2548 | 0.251634 | CTCCTCCTTGTTGCTCTCCC | 59.748 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1255 | 2549 | 1.201429 | TCCTCCTTGTTGCTCTCCCC | 61.201 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 |
1272 | 2566 | 4.520846 | CCGGCGCACGCTTCAATC | 62.521 | 66.667 | 15.36 | 0.00 | 42.52 | 2.67 |
1274 | 2568 | 3.430862 | GGCGCACGCTTCAATCCA | 61.431 | 61.111 | 15.36 | 0.00 | 41.60 | 3.41 |
1275 | 2569 | 2.202349 | GCGCACGCTTCAATCCAC | 60.202 | 61.111 | 7.96 | 0.00 | 38.26 | 4.02 |
1277 | 2571 | 1.133253 | CGCACGCTTCAATCCACTG | 59.867 | 57.895 | 0.00 | 0.00 | 0.00 | 3.66 |
1278 | 2572 | 1.291184 | CGCACGCTTCAATCCACTGA | 61.291 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1280 | 2574 | 0.798776 | CACGCTTCAATCCACTGACC | 59.201 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1281 | 2575 | 0.687354 | ACGCTTCAATCCACTGACCT | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1282 | 2576 | 1.338200 | ACGCTTCAATCCACTGACCTC | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
1283 | 2577 | 1.363744 | GCTTCAATCCACTGACCTCG | 58.636 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
1284 | 2578 | 1.338200 | GCTTCAATCCACTGACCTCGT | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
1285 | 2579 | 2.872038 | GCTTCAATCCACTGACCTCGTT | 60.872 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1286 | 2580 | 2.455674 | TCAATCCACTGACCTCGTTG | 57.544 | 50.000 | 0.00 | 0.00 | 0.00 | 4.10 |
1291 | 2585 | 2.248248 | TCCACTGACCTCGTTGATCTT | 58.752 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
1468 | 2780 | 2.354704 | CCAAAAGATGCTCGTCTACCCA | 60.355 | 50.000 | 0.00 | 0.00 | 0.00 | 4.51 |
1617 | 2960 | 3.465871 | CAAAACTTGGGTGGGTTTCATG | 58.534 | 45.455 | 0.00 | 0.00 | 35.02 | 3.07 |
1621 | 2964 | 2.042979 | ACTTGGGTGGGTTTCATGCTAT | 59.957 | 45.455 | 0.00 | 0.00 | 0.00 | 2.97 |
1625 | 2968 | 2.099098 | GGGTGGGTTTCATGCTATTTCG | 59.901 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
1627 | 2970 | 1.748493 | TGGGTTTCATGCTATTTCGGC | 59.252 | 47.619 | 0.00 | 0.00 | 0.00 | 5.54 |
1669 | 3012 | 8.084073 | TCTGTGTCCAATCTGAAAATCAAAATC | 58.916 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
1672 | 3015 | 6.862608 | TGTCCAATCTGAAAATCAAAATCACG | 59.137 | 34.615 | 0.00 | 0.00 | 0.00 | 4.35 |
1703 | 3046 | 2.489329 | CAGTAAATTCAGTGGTGCCTGG | 59.511 | 50.000 | 0.00 | 0.00 | 33.14 | 4.45 |
1714 | 3057 | 1.144708 | TGGTGCCTGGAATTTCAGTCA | 59.855 | 47.619 | 12.86 | 2.83 | 33.14 | 3.41 |
1718 | 3061 | 4.442753 | GGTGCCTGGAATTTCAGTCAAAAA | 60.443 | 41.667 | 12.86 | 0.00 | 33.14 | 1.94 |
1788 | 3131 | 6.347240 | GCATTCAGTCTGTTACAAGTCTTGAG | 60.347 | 42.308 | 19.53 | 6.16 | 0.00 | 3.02 |
1799 | 3142 | 4.384056 | ACAAGTCTTGAGTTGATGTCAGG | 58.616 | 43.478 | 19.53 | 0.00 | 0.00 | 3.86 |
1800 | 3143 | 4.141620 | ACAAGTCTTGAGTTGATGTCAGGT | 60.142 | 41.667 | 19.53 | 0.00 | 0.00 | 4.00 |
1801 | 3144 | 5.070446 | ACAAGTCTTGAGTTGATGTCAGGTA | 59.930 | 40.000 | 19.53 | 0.00 | 0.00 | 3.08 |
1802 | 3145 | 5.398603 | AGTCTTGAGTTGATGTCAGGTAG | 57.601 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
1803 | 3146 | 4.835615 | AGTCTTGAGTTGATGTCAGGTAGT | 59.164 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
1811 | 3154 | 8.105197 | TGAGTTGATGTCAGGTAGTACTAGTAA | 58.895 | 37.037 | 3.61 | 0.00 | 0.00 | 2.24 |
1839 | 3182 | 1.532868 | GGCCTTTGCGTGCTCATATAG | 59.467 | 52.381 | 0.00 | 0.00 | 38.85 | 1.31 |
1931 | 3274 | 3.569701 | AGGTTCAAATGTCACATCCACAC | 59.430 | 43.478 | 0.00 | 0.00 | 0.00 | 3.82 |
2049 | 3399 | 4.557301 | GGTGCGATTTGATTTAAAACGGAG | 59.443 | 41.667 | 5.89 | 0.00 | 43.25 | 4.63 |
2065 | 3415 | 2.028130 | CGGAGTATGCCTCTTGAGTCT | 58.972 | 52.381 | 0.00 | 0.00 | 40.30 | 3.24 |
2203 | 3690 | 1.797635 | GCTTGTCTGAGTTCACTCTGC | 59.202 | 52.381 | 8.41 | 5.30 | 43.25 | 4.26 |
2220 | 3718 | 6.376299 | TCACTCTGCTCTGCAAAATCATAAAT | 59.624 | 34.615 | 0.00 | 0.00 | 38.41 | 1.40 |
2269 | 3767 | 8.704668 | TCAATTCCTGCAAAGTAGATCAGTATA | 58.295 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
2372 | 3872 | 2.094390 | AGCATGTGCCAGCAAATTACAG | 60.094 | 45.455 | 0.57 | 0.00 | 43.38 | 2.74 |
2401 | 3901 | 4.946784 | ACAATCGATTCCTGCAAACTAC | 57.053 | 40.909 | 7.92 | 0.00 | 0.00 | 2.73 |
2402 | 3902 | 4.579869 | ACAATCGATTCCTGCAAACTACT | 58.420 | 39.130 | 7.92 | 0.00 | 0.00 | 2.57 |
2455 | 3955 | 2.417933 | CTGTTATCTGAACCTGCACTGC | 59.582 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2461 | 3962 | 2.281692 | AACCTGCACTGCATCGCA | 60.282 | 55.556 | 3.64 | 9.56 | 38.13 | 5.10 |
2517 | 4018 | 2.036604 | CTGGCCAAAACGGTACCAAATT | 59.963 | 45.455 | 13.54 | 0.00 | 36.97 | 1.82 |
2616 | 4117 | 2.081212 | CAACGTGCTCCTCGACGAC | 61.081 | 63.158 | 0.00 | 0.00 | 38.94 | 4.34 |
2673 | 4174 | 1.870016 | GCTCTTCCTCGAAGACGCG | 60.870 | 63.158 | 3.53 | 3.53 | 42.78 | 6.01 |
2682 | 4183 | 2.500369 | GAAGACGCGACGCACGTA | 60.500 | 61.111 | 21.35 | 0.00 | 45.24 | 3.57 |
2727 | 4228 | 1.256812 | AGTAAGCCCCAAACACATGC | 58.743 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
2752 | 4253 | 6.868339 | CACCACTTCCATTCAATAGGTTTTTC | 59.132 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
2753 | 4254 | 6.782494 | ACCACTTCCATTCAATAGGTTTTTCT | 59.218 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
2754 | 4255 | 7.290014 | ACCACTTCCATTCAATAGGTTTTTCTT | 59.710 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
3014 | 4519 | 8.277713 | CCTGCATTTTACTTTTTCAACATGAAG | 58.722 | 33.333 | 0.00 | 0.00 | 37.70 | 3.02 |
3023 | 4528 | 7.050377 | ACTTTTTCAACATGAAGAGAGAGACA | 58.950 | 34.615 | 0.00 | 0.00 | 37.70 | 3.41 |
3024 | 4529 | 7.718753 | ACTTTTTCAACATGAAGAGAGAGACAT | 59.281 | 33.333 | 0.00 | 0.00 | 37.70 | 3.06 |
3025 | 4530 | 7.430992 | TTTTCAACATGAAGAGAGAGACATG | 57.569 | 36.000 | 0.00 | 0.00 | 43.56 | 3.21 |
3026 | 4531 | 4.502016 | TCAACATGAAGAGAGAGACATGC | 58.498 | 43.478 | 0.00 | 0.00 | 42.28 | 4.06 |
3027 | 4532 | 4.222366 | TCAACATGAAGAGAGAGACATGCT | 59.778 | 41.667 | 0.00 | 0.00 | 42.28 | 3.79 |
3028 | 4533 | 4.389890 | ACATGAAGAGAGAGACATGCTC | 57.610 | 45.455 | 0.00 | 8.56 | 42.28 | 4.26 |
3094 | 4630 | 3.672295 | CTGTCAGAGGAAGGCCGGC | 62.672 | 68.421 | 21.18 | 21.18 | 39.96 | 6.13 |
3393 | 4929 | 1.084370 | CCTCGACGCTGGGAAACATC | 61.084 | 60.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3543 | 5079 | 3.203263 | AGATCTAGTACAGGAGGCAGTGA | 59.797 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
3546 | 5082 | 1.198713 | AGTACAGGAGGCAGTGATGG | 58.801 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3552 | 5312 | 0.393537 | GGAGGCAGTGATGGTTCCAG | 60.394 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
3580 | 5340 | 2.224784 | CCGGTCCAGTTTTCTTTTACCG | 59.775 | 50.000 | 0.00 | 0.00 | 42.01 | 4.02 |
3586 | 5346 | 7.257003 | GGTCCAGTTTTCTTTTACCGTTTTTA | 58.743 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
3612 | 5372 | 6.239217 | AGCTTTTCCATTTTCTCCTGTTTT | 57.761 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
3613 | 5373 | 7.360113 | AGCTTTTCCATTTTCTCCTGTTTTA | 57.640 | 32.000 | 0.00 | 0.00 | 0.00 | 1.52 |
3643 | 5403 | 8.885494 | TGTTCAGAAATTTCAGGGTTTATTTG | 57.115 | 30.769 | 19.99 | 5.79 | 0.00 | 2.32 |
3644 | 5404 | 7.930865 | TGTTCAGAAATTTCAGGGTTTATTTGG | 59.069 | 33.333 | 19.99 | 0.00 | 0.00 | 3.28 |
3648 | 5408 | 9.506018 | CAGAAATTTCAGGGTTTATTTGGAAAT | 57.494 | 29.630 | 19.99 | 0.00 | 36.75 | 2.17 |
3649 | 5409 | 9.725019 | AGAAATTTCAGGGTTTATTTGGAAATC | 57.275 | 29.630 | 19.99 | 0.00 | 34.81 | 2.17 |
3658 | 5418 | 8.659527 | AGGGTTTATTTGGAAATCAGAAAATGT | 58.340 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
3718 | 5480 | 8.319143 | AGAATGATTCTTTTTGCAAAATGGAG | 57.681 | 30.769 | 27.78 | 21.11 | 36.36 | 3.86 |
3748 | 5510 | 3.726291 | AAGTTTCAACATTGGTTCGGG | 57.274 | 42.857 | 0.00 | 0.00 | 34.21 | 5.14 |
3749 | 5511 | 2.938838 | AGTTTCAACATTGGTTCGGGA | 58.061 | 42.857 | 0.00 | 0.00 | 34.21 | 5.14 |
3762 | 5524 | 6.610741 | TTGGTTCGGGATTTTTGAAATTTG | 57.389 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
3768 | 5530 | 4.514816 | CGGGATTTTTGAAATTTGCTTGGT | 59.485 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
3790 | 5552 | 9.844257 | TTGGTAATTTCAAATTTGGTTCAGAAT | 57.156 | 25.926 | 17.90 | 6.65 | 0.00 | 2.40 |
3964 | 5752 | 1.970640 | ACATCTCACTACAGTGCCACA | 59.029 | 47.619 | 4.43 | 0.00 | 45.25 | 4.17 |
3965 | 5753 | 2.568956 | ACATCTCACTACAGTGCCACAT | 59.431 | 45.455 | 4.43 | 0.00 | 45.25 | 3.21 |
3967 | 5755 | 1.081892 | CTCACTACAGTGCCACATGC | 58.918 | 55.000 | 4.43 | 0.00 | 45.25 | 4.06 |
3969 | 5757 | 0.606130 | CACTACAGTGCCACATGCCA | 60.606 | 55.000 | 0.00 | 0.00 | 39.39 | 4.92 |
3974 | 5762 | 1.559219 | ACAGTGCCACATGCCACTATA | 59.441 | 47.619 | 12.24 | 0.00 | 40.16 | 1.31 |
4030 | 5818 | 4.628333 | CCTGTGCAAAATGCTTCCTATTTG | 59.372 | 41.667 | 3.78 | 0.00 | 45.31 | 2.32 |
4031 | 5819 | 5.465532 | TGTGCAAAATGCTTCCTATTTGA | 57.534 | 34.783 | 3.78 | 0.00 | 45.31 | 2.69 |
4034 | 5822 | 4.022416 | TGCAAAATGCTTCCTATTTGACGT | 60.022 | 37.500 | 3.78 | 0.00 | 45.31 | 4.34 |
4035 | 5823 | 4.324402 | GCAAAATGCTTCCTATTTGACGTG | 59.676 | 41.667 | 0.00 | 0.00 | 40.96 | 4.49 |
4036 | 5824 | 5.460646 | CAAAATGCTTCCTATTTGACGTGT | 58.539 | 37.500 | 0.00 | 0.00 | 35.34 | 4.49 |
4037 | 5825 | 5.705609 | AAATGCTTCCTATTTGACGTGTT | 57.294 | 34.783 | 0.00 | 0.00 | 0.00 | 3.32 |
4038 | 5826 | 6.811253 | AAATGCTTCCTATTTGACGTGTTA | 57.189 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
4039 | 5827 | 7.391148 | AAATGCTTCCTATTTGACGTGTTAT | 57.609 | 32.000 | 0.00 | 0.00 | 0.00 | 1.89 |
4040 | 5828 | 8.500753 | AAATGCTTCCTATTTGACGTGTTATA | 57.499 | 30.769 | 0.00 | 0.00 | 0.00 | 0.98 |
4041 | 5829 | 8.677148 | AATGCTTCCTATTTGACGTGTTATAT | 57.323 | 30.769 | 0.00 | 0.00 | 0.00 | 0.86 |
4042 | 5830 | 7.709269 | TGCTTCCTATTTGACGTGTTATATC | 57.291 | 36.000 | 0.00 | 0.00 | 0.00 | 1.63 |
4043 | 5831 | 7.497595 | TGCTTCCTATTTGACGTGTTATATCT | 58.502 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
4044 | 5832 | 7.985184 | TGCTTCCTATTTGACGTGTTATATCTT | 59.015 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
4045 | 5833 | 8.827677 | GCTTCCTATTTGACGTGTTATATCTTT | 58.172 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
4047 | 5835 | 9.661563 | TTCCTATTTGACGTGTTATATCTTTGT | 57.338 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
4053 | 5841 | 7.688478 | TGACGTGTTATATCTTTGTATTCCG | 57.312 | 36.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4054 | 5842 | 7.482474 | TGACGTGTTATATCTTTGTATTCCGA | 58.518 | 34.615 | 0.00 | 0.00 | 0.00 | 4.55 |
4055 | 5843 | 8.139350 | TGACGTGTTATATCTTTGTATTCCGAT | 58.861 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
4056 | 5844 | 8.294341 | ACGTGTTATATCTTTGTATTCCGATG | 57.706 | 34.615 | 0.00 | 0.00 | 0.00 | 3.84 |
4057 | 5845 | 8.139350 | ACGTGTTATATCTTTGTATTCCGATGA | 58.861 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
4058 | 5846 | 9.140286 | CGTGTTATATCTTTGTATTCCGATGAT | 57.860 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
4120 | 5923 | 9.935682 | AAATTGATGCACTATACGTCAAATAAG | 57.064 | 29.630 | 0.00 | 0.00 | 44.00 | 1.73 |
4121 | 5924 | 6.525121 | TGATGCACTATACGTCAAATAAGC | 57.475 | 37.500 | 0.00 | 0.00 | 30.26 | 3.09 |
4122 | 5925 | 6.045955 | TGATGCACTATACGTCAAATAAGCA | 58.954 | 36.000 | 0.00 | 0.00 | 30.26 | 3.91 |
4123 | 5926 | 6.536941 | TGATGCACTATACGTCAAATAAGCAA | 59.463 | 34.615 | 0.00 | 0.00 | 30.26 | 3.91 |
4131 | 5934 | 2.159448 | CGTCAAATAAGCAATCCCGCAA | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
4139 | 5942 | 2.044946 | AATCCCGCAAGTCCTGGC | 60.045 | 61.111 | 0.00 | 0.00 | 0.00 | 4.85 |
4143 | 5946 | 2.046023 | CCGCAAGTCCTGGCATGA | 60.046 | 61.111 | 0.00 | 0.00 | 0.00 | 3.07 |
4153 | 5956 | 1.180456 | CCTGGCATGACAAAGCACCA | 61.180 | 55.000 | 1.11 | 0.00 | 0.00 | 4.17 |
4154 | 5957 | 0.038892 | CTGGCATGACAAAGCACCAC | 60.039 | 55.000 | 1.11 | 0.00 | 0.00 | 4.16 |
4155 | 5958 | 0.754587 | TGGCATGACAAAGCACCACA | 60.755 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
4157 | 5960 | 1.818060 | GGCATGACAAAGCACCACATA | 59.182 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
4158 | 5961 | 2.415893 | GGCATGACAAAGCACCACATAC | 60.416 | 50.000 | 0.00 | 0.00 | 0.00 | 2.39 |
4159 | 5962 | 2.228582 | GCATGACAAAGCACCACATACA | 59.771 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
4205 | 6008 | 0.541863 | ACCTCGATTGGGTGGACATC | 59.458 | 55.000 | 0.00 | 0.00 | 35.51 | 3.06 |
4207 | 6010 | 0.175760 | CTCGATTGGGTGGACATCGT | 59.824 | 55.000 | 0.00 | 0.00 | 36.31 | 3.73 |
4209 | 6012 | 0.726827 | CGATTGGGTGGACATCGTTG | 59.273 | 55.000 | 0.00 | 0.00 | 0.00 | 4.10 |
4213 | 6016 | 2.332654 | GGGTGGACATCGTTGTGCC | 61.333 | 63.158 | 14.52 | 10.69 | 43.03 | 5.01 |
4217 | 6020 | 2.690778 | GGACATCGTTGTGCCCTGC | 61.691 | 63.158 | 3.34 | 0.00 | 38.18 | 4.85 |
4219 | 6022 | 3.443045 | CATCGTTGTGCCCTGCCC | 61.443 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
4221 | 6024 | 3.286694 | ATCGTTGTGCCCTGCCCAT | 62.287 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
4222 | 6025 | 3.751246 | CGTTGTGCCCTGCCCATG | 61.751 | 66.667 | 0.00 | 0.00 | 0.00 | 3.66 |
4223 | 6026 | 3.384532 | GTTGTGCCCTGCCCATGG | 61.385 | 66.667 | 4.14 | 4.14 | 0.00 | 3.66 |
4224 | 6027 | 3.913445 | TTGTGCCCTGCCCATGGT | 61.913 | 61.111 | 11.73 | 0.00 | 0.00 | 3.55 |
4225 | 6028 | 3.465218 | TTGTGCCCTGCCCATGGTT | 62.465 | 57.895 | 11.73 | 0.00 | 0.00 | 3.67 |
4226 | 6029 | 3.384532 | GTGCCCTGCCCATGGTTG | 61.385 | 66.667 | 11.73 | 0.00 | 0.00 | 3.77 |
4227 | 6030 | 3.588511 | TGCCCTGCCCATGGTTGA | 61.589 | 61.111 | 11.73 | 0.00 | 0.00 | 3.18 |
4228 | 6031 | 2.757099 | GCCCTGCCCATGGTTGAG | 60.757 | 66.667 | 11.73 | 2.96 | 0.00 | 3.02 |
4229 | 6032 | 2.043652 | CCCTGCCCATGGTTGAGG | 60.044 | 66.667 | 11.73 | 12.01 | 0.00 | 3.86 |
4230 | 6033 | 2.765969 | CCTGCCCATGGTTGAGGT | 59.234 | 61.111 | 11.73 | 0.00 | 0.00 | 3.85 |
4231 | 6034 | 1.570857 | CCCTGCCCATGGTTGAGGTA | 61.571 | 60.000 | 11.73 | 0.00 | 0.00 | 3.08 |
4232 | 6035 | 0.331278 | CCTGCCCATGGTTGAGGTAA | 59.669 | 55.000 | 11.73 | 0.00 | 0.00 | 2.85 |
4233 | 6036 | 1.063717 | CCTGCCCATGGTTGAGGTAAT | 60.064 | 52.381 | 11.73 | 0.00 | 0.00 | 1.89 |
4234 | 6037 | 2.624029 | CCTGCCCATGGTTGAGGTAATT | 60.624 | 50.000 | 11.73 | 0.00 | 0.00 | 1.40 |
4235 | 6038 | 3.099141 | CTGCCCATGGTTGAGGTAATTT | 58.901 | 45.455 | 11.73 | 0.00 | 0.00 | 1.82 |
4236 | 6039 | 3.096092 | TGCCCATGGTTGAGGTAATTTC | 58.904 | 45.455 | 11.73 | 0.00 | 0.00 | 2.17 |
4237 | 6040 | 3.245586 | TGCCCATGGTTGAGGTAATTTCT | 60.246 | 43.478 | 11.73 | 0.00 | 0.00 | 2.52 |
4238 | 6041 | 4.017958 | TGCCCATGGTTGAGGTAATTTCTA | 60.018 | 41.667 | 11.73 | 0.00 | 0.00 | 2.10 |
4239 | 6042 | 4.580580 | GCCCATGGTTGAGGTAATTTCTAG | 59.419 | 45.833 | 11.73 | 0.00 | 0.00 | 2.43 |
4240 | 6043 | 4.580580 | CCCATGGTTGAGGTAATTTCTAGC | 59.419 | 45.833 | 11.73 | 0.00 | 0.00 | 3.42 |
4241 | 6044 | 4.273480 | CCATGGTTGAGGTAATTTCTAGCG | 59.727 | 45.833 | 2.57 | 0.00 | 0.00 | 4.26 |
4270 | 6073 | 6.226787 | ACACATCTTATATGAGCTACAAGGC | 58.773 | 40.000 | 0.00 | 0.00 | 0.00 | 4.35 |
4274 | 6077 | 2.938956 | ATATGAGCTACAAGGCCCAC | 57.061 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
4283 | 6086 | 2.514458 | ACAAGGCCCACTCCAATTAG | 57.486 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
4290 | 6093 | 3.056821 | GGCCCACTCCAATTAGTCAAAAC | 60.057 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
4304 | 6107 | 5.593679 | AGTCAAAACTAATAGGCTAGCGA | 57.406 | 39.130 | 9.00 | 0.00 | 32.59 | 4.93 |
4319 | 6122 | 4.686554 | GGCTAGCGACATTCCATAGTTTAG | 59.313 | 45.833 | 9.00 | 0.00 | 0.00 | 1.85 |
4362 | 6165 | 2.403252 | CCCCCAGTAGTGTGTGATTC | 57.597 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
4363 | 6166 | 1.065418 | CCCCCAGTAGTGTGTGATTCC | 60.065 | 57.143 | 0.00 | 0.00 | 0.00 | 3.01 |
4364 | 6167 | 1.909302 | CCCCAGTAGTGTGTGATTCCT | 59.091 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
4365 | 6168 | 3.104512 | CCCCAGTAGTGTGTGATTCCTA | 58.895 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
4366 | 6169 | 3.711704 | CCCCAGTAGTGTGTGATTCCTAT | 59.288 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
4367 | 6170 | 4.164221 | CCCCAGTAGTGTGTGATTCCTATT | 59.836 | 45.833 | 0.00 | 0.00 | 0.00 | 1.73 |
4368 | 6171 | 5.360591 | CCCAGTAGTGTGTGATTCCTATTC | 58.639 | 45.833 | 0.00 | 0.00 | 0.00 | 1.75 |
4369 | 6172 | 5.043903 | CCAGTAGTGTGTGATTCCTATTCG | 58.956 | 45.833 | 0.00 | 0.00 | 0.00 | 3.34 |
4370 | 6173 | 5.394224 | CCAGTAGTGTGTGATTCCTATTCGT | 60.394 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4371 | 6174 | 5.744345 | CAGTAGTGTGTGATTCCTATTCGTC | 59.256 | 44.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4372 | 6175 | 4.801330 | AGTGTGTGATTCCTATTCGTCA | 57.199 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
4373 | 6176 | 4.495422 | AGTGTGTGATTCCTATTCGTCAC | 58.505 | 43.478 | 0.00 | 0.00 | 40.93 | 3.67 |
4374 | 6177 | 3.617263 | GTGTGTGATTCCTATTCGTCACC | 59.383 | 47.826 | 0.00 | 0.00 | 40.07 | 4.02 |
4375 | 6178 | 3.259625 | TGTGTGATTCCTATTCGTCACCA | 59.740 | 43.478 | 0.00 | 0.00 | 40.07 | 4.17 |
4376 | 6179 | 4.250464 | GTGTGATTCCTATTCGTCACCAA | 58.750 | 43.478 | 0.00 | 0.00 | 40.07 | 3.67 |
4383 | 6546 | 3.056107 | TCCTATTCGTCACCAACAAGGAG | 60.056 | 47.826 | 0.00 | 0.00 | 41.22 | 3.69 |
4399 | 6562 | 7.114811 | CCAACAAGGAGAAATTACAACAAATCG | 59.885 | 37.037 | 0.00 | 0.00 | 41.22 | 3.34 |
4406 | 6569 | 7.381139 | GGAGAAATTACAACAAATCGCAGAAAA | 59.619 | 33.333 | 0.00 | 0.00 | 43.58 | 2.29 |
4433 | 6596 | 0.682852 | ACTTTACCTGCGCCACTACA | 59.317 | 50.000 | 4.18 | 0.00 | 0.00 | 2.74 |
4440 | 6603 | 1.291877 | CTGCGCCACTACAACTGACC | 61.292 | 60.000 | 4.18 | 0.00 | 0.00 | 4.02 |
4441 | 6604 | 1.301401 | GCGCCACTACAACTGACCA | 60.301 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
24 | 25 | 5.064558 | TCAACGGTAGTCCAATAGCAAAAA | 58.935 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
25 | 26 | 4.643463 | TCAACGGTAGTCCAATAGCAAAA | 58.357 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
26 | 27 | 4.274602 | TCAACGGTAGTCCAATAGCAAA | 57.725 | 40.909 | 0.00 | 0.00 | 0.00 | 3.68 |
28 | 29 | 3.512329 | TCTTCAACGGTAGTCCAATAGCA | 59.488 | 43.478 | 0.00 | 0.00 | 0.00 | 3.49 |
29 | 30 | 4.113354 | CTCTTCAACGGTAGTCCAATAGC | 58.887 | 47.826 | 0.00 | 0.00 | 0.00 | 2.97 |
30 | 31 | 4.441634 | CCCTCTTCAACGGTAGTCCAATAG | 60.442 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
31 | 32 | 3.449737 | CCCTCTTCAACGGTAGTCCAATA | 59.550 | 47.826 | 0.00 | 0.00 | 0.00 | 1.90 |
32 | 33 | 2.236395 | CCCTCTTCAACGGTAGTCCAAT | 59.764 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
33 | 34 | 1.621814 | CCCTCTTCAACGGTAGTCCAA | 59.378 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
34 | 35 | 1.263356 | CCCTCTTCAACGGTAGTCCA | 58.737 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
36 | 37 | 3.397849 | AAACCCTCTTCAACGGTAGTC | 57.602 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
37 | 38 | 3.851458 | AAAACCCTCTTCAACGGTAGT | 57.149 | 42.857 | 0.00 | 0.00 | 0.00 | 2.73 |
38 | 39 | 5.407691 | GTCTAAAAACCCTCTTCAACGGTAG | 59.592 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
39 | 40 | 5.299949 | GTCTAAAAACCCTCTTCAACGGTA | 58.700 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
40 | 41 | 4.132336 | GTCTAAAAACCCTCTTCAACGGT | 58.868 | 43.478 | 0.00 | 0.00 | 0.00 | 4.83 |
45 | 46 | 4.240323 | AGGAGGTCTAAAAACCCTCTTCA | 58.760 | 43.478 | 5.03 | 0.00 | 43.54 | 3.02 |
47 | 48 | 5.339282 | GCATAGGAGGTCTAAAAACCCTCTT | 60.339 | 44.000 | 5.03 | 0.31 | 43.54 | 2.85 |
48 | 49 | 4.164413 | GCATAGGAGGTCTAAAAACCCTCT | 59.836 | 45.833 | 5.03 | 0.00 | 43.54 | 3.69 |
50 | 51 | 3.202373 | GGCATAGGAGGTCTAAAAACCCT | 59.798 | 47.826 | 0.00 | 0.00 | 40.42 | 4.34 |
52 | 53 | 4.505324 | AGGCATAGGAGGTCTAAAAACC | 57.495 | 45.455 | 0.00 | 0.00 | 39.80 | 3.27 |
53 | 54 | 7.933215 | TTTAAGGCATAGGAGGTCTAAAAAC | 57.067 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
54 | 55 | 8.799367 | GTTTTTAAGGCATAGGAGGTCTAAAAA | 58.201 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
55 | 56 | 7.120138 | CGTTTTTAAGGCATAGGAGGTCTAAAA | 59.880 | 37.037 | 0.00 | 0.00 | 0.00 | 1.52 |
56 | 57 | 6.596497 | CGTTTTTAAGGCATAGGAGGTCTAAA | 59.404 | 38.462 | 0.00 | 0.00 | 0.00 | 1.85 |
57 | 58 | 6.110707 | CGTTTTTAAGGCATAGGAGGTCTAA | 58.889 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
58 | 59 | 5.395990 | CCGTTTTTAAGGCATAGGAGGTCTA | 60.396 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
59 | 60 | 4.514401 | CGTTTTTAAGGCATAGGAGGTCT | 58.486 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
60 | 61 | 3.626217 | CCGTTTTTAAGGCATAGGAGGTC | 59.374 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
61 | 62 | 3.009805 | ACCGTTTTTAAGGCATAGGAGGT | 59.990 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
62 | 63 | 3.617284 | ACCGTTTTTAAGGCATAGGAGG | 58.383 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
63 | 64 | 5.820947 | ACATACCGTTTTTAAGGCATAGGAG | 59.179 | 40.000 | 0.00 | 0.00 | 0.00 | 3.69 |
66 | 67 | 5.270853 | GCACATACCGTTTTTAAGGCATAG | 58.729 | 41.667 | 0.00 | 0.00 | 0.00 | 2.23 |
67 | 68 | 4.096682 | GGCACATACCGTTTTTAAGGCATA | 59.903 | 41.667 | 0.00 | 0.00 | 0.00 | 3.14 |
68 | 69 | 3.119280 | GGCACATACCGTTTTTAAGGCAT | 60.119 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
71 | 72 | 3.086282 | AGGGCACATACCGTTTTTAAGG | 58.914 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
74 | 75 | 9.796180 | ATAATATTAGGGCACATACCGTTTTTA | 57.204 | 29.630 | 1.02 | 0.00 | 0.00 | 1.52 |
75 | 76 | 8.700439 | ATAATATTAGGGCACATACCGTTTTT | 57.300 | 30.769 | 1.02 | 0.00 | 0.00 | 1.94 |
76 | 77 | 9.223099 | GTATAATATTAGGGCACATACCGTTTT | 57.777 | 33.333 | 1.02 | 0.00 | 0.00 | 2.43 |
77 | 78 | 8.599792 | AGTATAATATTAGGGCACATACCGTTT | 58.400 | 33.333 | 1.02 | 0.00 | 0.00 | 3.60 |
78 | 79 | 8.142485 | AGTATAATATTAGGGCACATACCGTT | 57.858 | 34.615 | 1.02 | 0.00 | 0.00 | 4.44 |
79 | 80 | 7.729124 | AGTATAATATTAGGGCACATACCGT | 57.271 | 36.000 | 1.02 | 0.00 | 0.00 | 4.83 |
82 | 83 | 7.282450 | GGCCAAGTATAATATTAGGGCACATAC | 59.718 | 40.741 | 15.40 | 6.73 | 41.84 | 2.39 |
83 | 84 | 7.037225 | TGGCCAAGTATAATATTAGGGCACATA | 60.037 | 37.037 | 17.79 | 2.07 | 43.96 | 2.29 |
84 | 85 | 6.187682 | GGCCAAGTATAATATTAGGGCACAT | 58.812 | 40.000 | 15.40 | 0.00 | 41.84 | 3.21 |
85 | 86 | 5.073827 | TGGCCAAGTATAATATTAGGGCACA | 59.926 | 40.000 | 17.79 | 13.00 | 43.96 | 4.57 |
86 | 87 | 5.566469 | TGGCCAAGTATAATATTAGGGCAC | 58.434 | 41.667 | 17.79 | 11.39 | 43.96 | 5.01 |
87 | 88 | 5.851808 | TGGCCAAGTATAATATTAGGGCA | 57.148 | 39.130 | 17.79 | 17.79 | 46.16 | 5.36 |
88 | 89 | 8.440771 | AGATATGGCCAAGTATAATATTAGGGC | 58.559 | 37.037 | 10.96 | 14.09 | 40.27 | 5.19 |
90 | 91 | 9.698309 | CGAGATATGGCCAAGTATAATATTAGG | 57.302 | 37.037 | 10.96 | 0.00 | 0.00 | 2.69 |
91 | 92 | 9.698309 | CCGAGATATGGCCAAGTATAATATTAG | 57.302 | 37.037 | 10.96 | 0.00 | 0.00 | 1.73 |
92 | 93 | 8.647796 | CCCGAGATATGGCCAAGTATAATATTA | 58.352 | 37.037 | 10.96 | 0.00 | 0.00 | 0.98 |
94 | 95 | 6.464465 | GCCCGAGATATGGCCAAGTATAATAT | 60.464 | 42.308 | 10.96 | 0.00 | 41.97 | 1.28 |
95 | 96 | 5.163343 | GCCCGAGATATGGCCAAGTATAATA | 60.163 | 44.000 | 10.96 | 0.00 | 41.97 | 0.98 |
96 | 97 | 4.384208 | GCCCGAGATATGGCCAAGTATAAT | 60.384 | 45.833 | 10.96 | 0.00 | 41.97 | 1.28 |
99 | 100 | 1.279271 | GCCCGAGATATGGCCAAGTAT | 59.721 | 52.381 | 10.96 | 3.44 | 41.97 | 2.12 |
100 | 101 | 0.685097 | GCCCGAGATATGGCCAAGTA | 59.315 | 55.000 | 10.96 | 0.00 | 41.97 | 2.24 |
101 | 102 | 1.451936 | GCCCGAGATATGGCCAAGT | 59.548 | 57.895 | 10.96 | 0.00 | 41.97 | 3.16 |
107 | 108 | 4.394712 | GCCCGGCCCGAGATATGG | 62.395 | 72.222 | 3.71 | 0.00 | 0.00 | 2.74 |
139 | 140 | 2.203422 | TGGGTTTTCAGCACCGGG | 60.203 | 61.111 | 6.32 | 0.00 | 34.79 | 5.73 |
140 | 141 | 2.268076 | CCTGGGTTTTCAGCACCGG | 61.268 | 63.158 | 0.00 | 0.00 | 34.79 | 5.28 |
141 | 142 | 2.919494 | GCCTGGGTTTTCAGCACCG | 61.919 | 63.158 | 0.00 | 0.00 | 34.79 | 4.94 |
142 | 143 | 2.574018 | GGCCTGGGTTTTCAGCACC | 61.574 | 63.158 | 0.00 | 0.00 | 33.64 | 5.01 |
143 | 144 | 2.574018 | GGGCCTGGGTTTTCAGCAC | 61.574 | 63.158 | 0.84 | 0.00 | 33.64 | 4.40 |
146 | 147 | 1.675641 | CTCGGGCCTGGGTTTTCAG | 60.676 | 63.158 | 12.87 | 0.00 | 34.70 | 3.02 |
148 | 149 | 3.062466 | GCTCGGGCCTGGGTTTTC | 61.062 | 66.667 | 14.54 | 0.00 | 0.00 | 2.29 |
162 | 163 | 4.785453 | CAGGTTCAGGCCGGGCTC | 62.785 | 72.222 | 30.43 | 17.48 | 0.00 | 4.70 |
165 | 166 | 2.706952 | TTTTCCAGGTTCAGGCCGGG | 62.707 | 60.000 | 2.18 | 0.00 | 43.88 | 5.73 |
166 | 167 | 1.228429 | TTTTCCAGGTTCAGGCCGG | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 6.13 |
167 | 168 | 1.866853 | GCTTTTCCAGGTTCAGGCCG | 61.867 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
168 | 169 | 1.536073 | GGCTTTTCCAGGTTCAGGCC | 61.536 | 60.000 | 0.00 | 0.00 | 34.01 | 5.19 |
172 | 173 | 0.536460 | GTCGGGCTTTTCCAGGTTCA | 60.536 | 55.000 | 0.00 | 0.00 | 36.21 | 3.18 |
173 | 174 | 0.536460 | TGTCGGGCTTTTCCAGGTTC | 60.536 | 55.000 | 0.00 | 0.00 | 36.21 | 3.62 |
174 | 175 | 0.822121 | GTGTCGGGCTTTTCCAGGTT | 60.822 | 55.000 | 0.00 | 0.00 | 36.21 | 3.50 |
176 | 177 | 2.325082 | CGTGTCGGGCTTTTCCAGG | 61.325 | 63.158 | 0.00 | 0.00 | 36.21 | 4.45 |
177 | 178 | 2.325082 | CCGTGTCGGGCTTTTCCAG | 61.325 | 63.158 | 0.00 | 0.00 | 44.15 | 3.86 |
178 | 179 | 2.281208 | CCGTGTCGGGCTTTTCCA | 60.281 | 61.111 | 0.00 | 0.00 | 44.15 | 3.53 |
205 | 206 | 7.567821 | AAAATGGATTTTTAGCCGTGGTCGG | 62.568 | 44.000 | 2.09 | 2.09 | 46.57 | 4.79 |
208 | 209 | 4.282195 | TGAAAATGGATTTTTAGCCGTGGT | 59.718 | 37.500 | 0.00 | 0.00 | 39.86 | 4.16 |
210 | 211 | 5.226396 | TGTGAAAATGGATTTTTAGCCGTG | 58.774 | 37.500 | 0.00 | 0.00 | 39.86 | 4.94 |
211 | 212 | 5.461032 | TGTGAAAATGGATTTTTAGCCGT | 57.539 | 34.783 | 0.00 | 0.00 | 39.86 | 5.68 |
213 | 214 | 4.631377 | GCCTGTGAAAATGGATTTTTAGCC | 59.369 | 41.667 | 0.00 | 0.00 | 39.86 | 3.93 |
215 | 216 | 5.178061 | GGGCCTGTGAAAATGGATTTTTAG | 58.822 | 41.667 | 0.84 | 0.26 | 39.86 | 1.85 |
216 | 217 | 4.322349 | CGGGCCTGTGAAAATGGATTTTTA | 60.322 | 41.667 | 2.29 | 0.00 | 39.86 | 1.52 |
217 | 218 | 3.556843 | CGGGCCTGTGAAAATGGATTTTT | 60.557 | 43.478 | 2.29 | 0.00 | 39.86 | 1.94 |
218 | 219 | 2.028203 | CGGGCCTGTGAAAATGGATTTT | 60.028 | 45.455 | 2.29 | 0.00 | 42.24 | 1.82 |
222 | 223 | 0.322456 | CTCGGGCCTGTGAAAATGGA | 60.322 | 55.000 | 12.43 | 0.00 | 0.00 | 3.41 |
223 | 224 | 1.937546 | GCTCGGGCCTGTGAAAATGG | 61.938 | 60.000 | 17.90 | 0.00 | 0.00 | 3.16 |
225 | 226 | 4.002797 | GCTCGGGCCTGTGAAAAT | 57.997 | 55.556 | 17.90 | 0.00 | 0.00 | 1.82 |
258 | 259 | 1.135315 | CTGCAAATCAAGCCCGACG | 59.865 | 57.895 | 0.00 | 0.00 | 0.00 | 5.12 |
261 | 262 | 2.182537 | GCCTGCAAATCAAGCCCG | 59.817 | 61.111 | 0.00 | 0.00 | 0.00 | 6.13 |
262 | 263 | 2.580815 | GGCCTGCAAATCAAGCCC | 59.419 | 61.111 | 0.00 | 0.00 | 44.74 | 5.19 |
264 | 265 | 0.035176 | TTTGGGCCTGCAAATCAAGC | 59.965 | 50.000 | 4.53 | 0.00 | 0.00 | 4.01 |
265 | 266 | 1.608801 | GGTTTGGGCCTGCAAATCAAG | 60.609 | 52.381 | 11.59 | 0.00 | 0.00 | 3.02 |
266 | 267 | 0.396060 | GGTTTGGGCCTGCAAATCAA | 59.604 | 50.000 | 11.59 | 0.00 | 0.00 | 2.57 |
269 | 270 | 2.582493 | CGGGTTTGGGCCTGCAAAT | 61.582 | 57.895 | 4.53 | 0.00 | 0.00 | 2.32 |
291 | 292 | 0.813610 | TAAGCCCGAACATGCCATCG | 60.814 | 55.000 | 8.66 | 8.66 | 38.74 | 3.84 |
293 | 294 | 1.103398 | GCTAAGCCCGAACATGCCAT | 61.103 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
294 | 295 | 1.748879 | GCTAAGCCCGAACATGCCA | 60.749 | 57.895 | 0.00 | 0.00 | 0.00 | 4.92 |
295 | 296 | 2.481471 | GGCTAAGCCCGAACATGCC | 61.481 | 63.158 | 0.00 | 0.00 | 44.06 | 4.40 |
310 | 311 | 3.662117 | GAAAATCCCGGGCCTGGCT | 62.662 | 63.158 | 26.87 | 11.85 | 0.00 | 4.75 |
311 | 312 | 3.147595 | GAAAATCCCGGGCCTGGC | 61.148 | 66.667 | 26.87 | 11.05 | 0.00 | 4.85 |
313 | 314 | 2.828549 | CCGAAAATCCCGGGCCTG | 60.829 | 66.667 | 18.49 | 3.88 | 43.05 | 4.85 |
318 | 319 | 2.828549 | CCAGCCCGAAAATCCCGG | 60.829 | 66.667 | 0.00 | 0.00 | 46.10 | 5.73 |
320 | 321 | 1.753078 | GACCCAGCCCGAAAATCCC | 60.753 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
321 | 322 | 2.112815 | CGACCCAGCCCGAAAATCC | 61.113 | 63.158 | 0.00 | 0.00 | 0.00 | 3.01 |
322 | 323 | 2.112815 | CCGACCCAGCCCGAAAATC | 61.113 | 63.158 | 0.00 | 0.00 | 0.00 | 2.17 |
323 | 324 | 2.045340 | CCGACCCAGCCCGAAAAT | 60.045 | 61.111 | 0.00 | 0.00 | 0.00 | 1.82 |
365 | 366 | 2.683933 | AGGTAGACCTGGCCACGG | 60.684 | 66.667 | 16.92 | 16.92 | 46.55 | 4.94 |
374 | 375 | 5.941555 | AGCAGCCATATAATAGGTAGACC | 57.058 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
375 | 376 | 7.928706 | CCAATAGCAGCCATATAATAGGTAGAC | 59.071 | 40.741 | 0.00 | 0.00 | 0.00 | 2.59 |
376 | 377 | 7.844269 | TCCAATAGCAGCCATATAATAGGTAGA | 59.156 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
377 | 378 | 8.023021 | TCCAATAGCAGCCATATAATAGGTAG | 57.977 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
378 | 379 | 7.844269 | TCTCCAATAGCAGCCATATAATAGGTA | 59.156 | 37.037 | 0.00 | 0.00 | 0.00 | 3.08 |
380 | 381 | 7.129457 | TCTCCAATAGCAGCCATATAATAGG | 57.871 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
381 | 382 | 7.172875 | GCATCTCCAATAGCAGCCATATAATAG | 59.827 | 40.741 | 0.00 | 0.00 | 0.00 | 1.73 |
382 | 383 | 6.994496 | GCATCTCCAATAGCAGCCATATAATA | 59.006 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
385 | 386 | 4.472470 | AGCATCTCCAATAGCAGCCATATA | 59.528 | 41.667 | 0.00 | 0.00 | 0.00 | 0.86 |
387 | 388 | 2.641321 | AGCATCTCCAATAGCAGCCATA | 59.359 | 45.455 | 0.00 | 0.00 | 0.00 | 2.74 |
388 | 389 | 1.424302 | AGCATCTCCAATAGCAGCCAT | 59.576 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
389 | 390 | 0.841961 | AGCATCTCCAATAGCAGCCA | 59.158 | 50.000 | 0.00 | 0.00 | 0.00 | 4.75 |
390 | 391 | 1.521580 | GAGCATCTCCAATAGCAGCC | 58.478 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
403 | 404 | 1.141019 | TGTCGCCCGTTAGAGCATC | 59.859 | 57.895 | 0.00 | 0.00 | 0.00 | 3.91 |
404 | 405 | 1.153628 | GTGTCGCCCGTTAGAGCAT | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 3.79 |
405 | 406 | 2.260434 | GTGTCGCCCGTTAGAGCA | 59.740 | 61.111 | 0.00 | 0.00 | 0.00 | 4.26 |
406 | 407 | 2.092882 | GTGTGTCGCCCGTTAGAGC | 61.093 | 63.158 | 0.00 | 0.00 | 0.00 | 4.09 |
407 | 408 | 0.038526 | AAGTGTGTCGCCCGTTAGAG | 60.039 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
409 | 410 | 0.599204 | ACAAGTGTGTCGCCCGTTAG | 60.599 | 55.000 | 0.00 | 0.00 | 29.49 | 2.34 |
410 | 411 | 0.876777 | CACAAGTGTGTCGCCCGTTA | 60.877 | 55.000 | 3.17 | 0.00 | 40.96 | 3.18 |
411 | 412 | 2.177580 | CACAAGTGTGTCGCCCGTT | 61.178 | 57.895 | 3.17 | 0.00 | 40.96 | 4.44 |
418 | 419 | 5.858590 | ACACAGGGTAGCACAAGTGTGTC | 62.859 | 52.174 | 12.76 | 5.69 | 43.82 | 3.67 |
420 | 421 | 3.634502 | CACACAGGGTAGCACAAGTGTG | 61.635 | 54.545 | 17.55 | 17.55 | 46.97 | 3.82 |
421 | 422 | 0.837272 | ACACAGGGTAGCACAAGTGT | 59.163 | 50.000 | 1.79 | 0.00 | 35.58 | 3.55 |
422 | 423 | 1.229428 | CACACAGGGTAGCACAAGTG | 58.771 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
424 | 425 | 1.202639 | TGACACACAGGGTAGCACAAG | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
425 | 426 | 0.833949 | TGACACACAGGGTAGCACAA | 59.166 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
426 | 427 | 0.105964 | GTGACACACAGGGTAGCACA | 59.894 | 55.000 | 0.00 | 0.00 | 34.59 | 4.57 |
427 | 428 | 0.944311 | CGTGACACACAGGGTAGCAC | 60.944 | 60.000 | 6.37 | 0.00 | 33.40 | 4.40 |
428 | 429 | 1.365999 | CGTGACACACAGGGTAGCA | 59.634 | 57.895 | 6.37 | 0.00 | 33.40 | 3.49 |
429 | 430 | 0.666577 | GACGTGACACACAGGGTAGC | 60.667 | 60.000 | 6.37 | 0.00 | 38.51 | 3.58 |
430 | 431 | 0.386858 | CGACGTGACACACAGGGTAG | 60.387 | 60.000 | 6.37 | 0.00 | 38.51 | 3.18 |
431 | 432 | 1.655885 | CGACGTGACACACAGGGTA | 59.344 | 57.895 | 6.37 | 0.00 | 38.51 | 3.69 |
432 | 433 | 2.415843 | CGACGTGACACACAGGGT | 59.584 | 61.111 | 6.37 | 0.00 | 38.51 | 4.34 |
433 | 434 | 3.036084 | GCGACGTGACACACAGGG | 61.036 | 66.667 | 6.37 | 0.00 | 38.51 | 4.45 |
434 | 435 | 2.027605 | AGCGACGTGACACACAGG | 59.972 | 61.111 | 6.37 | 0.00 | 39.84 | 4.00 |
435 | 436 | 0.664466 | ATCAGCGACGTGACACACAG | 60.664 | 55.000 | 6.37 | 0.00 | 33.40 | 3.66 |
436 | 437 | 0.249280 | AATCAGCGACGTGACACACA | 60.249 | 50.000 | 6.37 | 0.00 | 33.40 | 3.72 |
437 | 438 | 0.161658 | CAATCAGCGACGTGACACAC | 59.838 | 55.000 | 6.37 | 0.00 | 0.00 | 3.82 |
438 | 439 | 0.249280 | ACAATCAGCGACGTGACACA | 60.249 | 50.000 | 6.37 | 0.00 | 0.00 | 3.72 |
439 | 440 | 0.435008 | GACAATCAGCGACGTGACAC | 59.565 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
440 | 441 | 0.313987 | AGACAATCAGCGACGTGACA | 59.686 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
443 | 444 | 3.423123 | GGTTTAAGACAATCAGCGACGTG | 60.423 | 47.826 | 0.00 | 0.00 | 0.00 | 4.49 |
445 | 446 | 2.993899 | AGGTTTAAGACAATCAGCGACG | 59.006 | 45.455 | 0.00 | 0.00 | 0.00 | 5.12 |
446 | 447 | 3.746492 | ACAGGTTTAAGACAATCAGCGAC | 59.254 | 43.478 | 0.00 | 0.00 | 0.00 | 5.19 |
447 | 448 | 4.002906 | ACAGGTTTAAGACAATCAGCGA | 57.997 | 40.909 | 0.00 | 0.00 | 0.00 | 4.93 |
448 | 449 | 4.749245 | AACAGGTTTAAGACAATCAGCG | 57.251 | 40.909 | 0.00 | 0.00 | 0.00 | 5.18 |
450 | 451 | 6.348213 | CCGGTAAACAGGTTTAAGACAATCAG | 60.348 | 42.308 | 6.21 | 0.00 | 36.86 | 2.90 |
451 | 452 | 5.470777 | CCGGTAAACAGGTTTAAGACAATCA | 59.529 | 40.000 | 6.21 | 0.00 | 36.86 | 2.57 |
452 | 453 | 5.471116 | ACCGGTAAACAGGTTTAAGACAATC | 59.529 | 40.000 | 4.49 | 0.00 | 41.69 | 2.67 |
453 | 454 | 5.379187 | ACCGGTAAACAGGTTTAAGACAAT | 58.621 | 37.500 | 4.49 | 0.00 | 41.69 | 2.71 |
455 | 456 | 4.420522 | ACCGGTAAACAGGTTTAAGACA | 57.579 | 40.909 | 4.49 | 0.00 | 41.69 | 3.41 |
464 | 465 | 4.036971 | TGATGAAACAAACCGGTAAACAGG | 59.963 | 41.667 | 8.00 | 0.00 | 37.23 | 4.00 |
465 | 466 | 5.176407 | TGATGAAACAAACCGGTAAACAG | 57.824 | 39.130 | 8.00 | 0.00 | 0.00 | 3.16 |
466 | 467 | 5.578005 | TTGATGAAACAAACCGGTAAACA | 57.422 | 34.783 | 8.00 | 3.30 | 0.00 | 2.83 |
467 | 468 | 6.697892 | TCATTTGATGAAACAAACCGGTAAAC | 59.302 | 34.615 | 8.00 | 0.00 | 41.49 | 2.01 |
469 | 470 | 6.392625 | TCATTTGATGAAACAAACCGGTAA | 57.607 | 33.333 | 8.00 | 0.00 | 41.49 | 2.85 |
471 | 472 | 4.927978 | TCATTTGATGAAACAAACCGGT | 57.072 | 36.364 | 0.00 | 0.00 | 41.49 | 5.28 |
481 | 482 | 6.339730 | CCCCGATTTCATTTCATTTGATGAA | 58.660 | 36.000 | 0.00 | 0.00 | 46.77 | 2.57 |
482 | 483 | 5.681954 | GCCCCGATTTCATTTCATTTGATGA | 60.682 | 40.000 | 0.00 | 0.00 | 37.55 | 2.92 |
483 | 484 | 4.508861 | GCCCCGATTTCATTTCATTTGATG | 59.491 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
484 | 485 | 4.161942 | TGCCCCGATTTCATTTCATTTGAT | 59.838 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
486 | 487 | 3.618150 | GTGCCCCGATTTCATTTCATTTG | 59.382 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
487 | 488 | 3.675775 | CGTGCCCCGATTTCATTTCATTT | 60.676 | 43.478 | 0.00 | 0.00 | 39.56 | 2.32 |
488 | 489 | 2.159254 | CGTGCCCCGATTTCATTTCATT | 60.159 | 45.455 | 0.00 | 0.00 | 39.56 | 2.57 |
489 | 490 | 1.405105 | CGTGCCCCGATTTCATTTCAT | 59.595 | 47.619 | 0.00 | 0.00 | 39.56 | 2.57 |
490 | 491 | 0.808125 | CGTGCCCCGATTTCATTTCA | 59.192 | 50.000 | 0.00 | 0.00 | 39.56 | 2.69 |
491 | 492 | 0.525455 | GCGTGCCCCGATTTCATTTC | 60.525 | 55.000 | 0.00 | 0.00 | 39.56 | 2.17 |
492 | 493 | 1.510844 | GCGTGCCCCGATTTCATTT | 59.489 | 52.632 | 0.00 | 0.00 | 39.56 | 2.32 |
494 | 495 | 2.828549 | GGCGTGCCCCGATTTCAT | 60.829 | 61.111 | 0.00 | 0.00 | 39.56 | 2.57 |
534 | 1782 | 0.827368 | GTCCTTCATCGGAGGAGCTT | 59.173 | 55.000 | 0.00 | 0.00 | 32.70 | 3.74 |
535 | 1783 | 1.388065 | CGTCCTTCATCGGAGGAGCT | 61.388 | 60.000 | 0.00 | 0.00 | 40.50 | 4.09 |
536 | 1784 | 1.066587 | CGTCCTTCATCGGAGGAGC | 59.933 | 63.158 | 0.00 | 0.00 | 40.50 | 4.70 |
802 | 2089 | 1.774639 | TTAGGAAACGTGACGTGCTC | 58.225 | 50.000 | 12.85 | 11.63 | 39.99 | 4.26 |
803 | 2090 | 2.334838 | GATTAGGAAACGTGACGTGCT | 58.665 | 47.619 | 12.85 | 2.69 | 39.99 | 4.40 |
804 | 2091 | 1.392510 | GGATTAGGAAACGTGACGTGC | 59.607 | 52.381 | 12.85 | 7.07 | 39.99 | 5.34 |
805 | 2092 | 2.921754 | GAGGATTAGGAAACGTGACGTG | 59.078 | 50.000 | 12.85 | 0.00 | 39.99 | 4.49 |
806 | 2093 | 2.415090 | CGAGGATTAGGAAACGTGACGT | 60.415 | 50.000 | 4.10 | 4.10 | 43.97 | 4.34 |
917 | 2205 | 2.971307 | CAGAGAAAGACTTCCCTGCTC | 58.029 | 52.381 | 0.00 | 0.00 | 31.54 | 4.26 |
920 | 2208 | 2.038295 | ACAGCAGAGAAAGACTTCCCTG | 59.962 | 50.000 | 0.00 | 0.00 | 39.69 | 4.45 |
921 | 2209 | 2.301583 | GACAGCAGAGAAAGACTTCCCT | 59.698 | 50.000 | 0.00 | 0.00 | 31.28 | 4.20 |
924 | 2212 | 2.614229 | GGGGACAGCAGAGAAAGACTTC | 60.614 | 54.545 | 0.00 | 0.00 | 0.00 | 3.01 |
925 | 2213 | 1.349357 | GGGGACAGCAGAGAAAGACTT | 59.651 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
926 | 2214 | 0.980423 | GGGGACAGCAGAGAAAGACT | 59.020 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
927 | 2215 | 0.390472 | CGGGGACAGCAGAGAAAGAC | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
928 | 2216 | 1.544825 | CCGGGGACAGCAGAGAAAGA | 61.545 | 60.000 | 0.00 | 0.00 | 0.00 | 2.52 |
954 | 2242 | 2.283173 | CCAAAGACCAGGCACCCC | 60.283 | 66.667 | 0.00 | 0.00 | 0.00 | 4.95 |
956 | 2244 | 0.755327 | ACAACCAAAGACCAGGCACC | 60.755 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
959 | 2247 | 1.109323 | AGCACAACCAAAGACCAGGC | 61.109 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
960 | 2248 | 2.154462 | CTAGCACAACCAAAGACCAGG | 58.846 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
984 | 2274 | 1.957877 | GGCATCTAGGCTCTAACGAGT | 59.042 | 52.381 | 0.00 | 0.00 | 39.53 | 4.18 |
989 | 2279 | 1.806461 | CGGCGGCATCTAGGCTCTAA | 61.806 | 60.000 | 10.53 | 0.00 | 41.46 | 2.10 |
1107 | 2401 | 3.916392 | GAGCGTCCACTGGTCACCG | 62.916 | 68.421 | 0.00 | 0.00 | 34.12 | 4.94 |
1110 | 2404 | 1.112916 | TGAAGAGCGTCCACTGGTCA | 61.113 | 55.000 | 0.00 | 0.00 | 36.34 | 4.02 |
1226 | 2520 | 0.474660 | ACAAGGAGGAGGAGGTTGCT | 60.475 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
1227 | 2521 | 0.402121 | AACAAGGAGGAGGAGGTTGC | 59.598 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
1229 | 2523 | 0.402121 | GCAACAAGGAGGAGGAGGTT | 59.598 | 55.000 | 0.00 | 0.00 | 0.00 | 3.50 |
1230 | 2524 | 0.474660 | AGCAACAAGGAGGAGGAGGT | 60.475 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1231 | 2525 | 0.251634 | GAGCAACAAGGAGGAGGAGG | 59.748 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1233 | 2527 | 1.270907 | GAGAGCAACAAGGAGGAGGA | 58.729 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1234 | 2528 | 0.251634 | GGAGAGCAACAAGGAGGAGG | 59.748 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1235 | 2529 | 0.251634 | GGGAGAGCAACAAGGAGGAG | 59.748 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1238 | 2532 | 1.301293 | GGGGGAGAGCAACAAGGAG | 59.699 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
1241 | 2535 | 2.045926 | CCGGGGGAGAGCAACAAG | 60.046 | 66.667 | 0.00 | 0.00 | 0.00 | 3.16 |
1242 | 2536 | 4.344865 | GCCGGGGGAGAGCAACAA | 62.345 | 66.667 | 2.18 | 0.00 | 0.00 | 2.83 |
1255 | 2549 | 4.520846 | GATTGAAGCGTGCGCCGG | 62.521 | 66.667 | 17.73 | 0.00 | 43.17 | 6.13 |
1260 | 2554 | 0.166814 | GTCAGTGGATTGAAGCGTGC | 59.833 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
1261 | 2555 | 0.798776 | GGTCAGTGGATTGAAGCGTG | 59.201 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
1262 | 2556 | 0.687354 | AGGTCAGTGGATTGAAGCGT | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 5.07 |
1263 | 2557 | 1.363744 | GAGGTCAGTGGATTGAAGCG | 58.636 | 55.000 | 0.00 | 0.00 | 0.00 | 4.68 |
1264 | 2558 | 1.338200 | ACGAGGTCAGTGGATTGAAGC | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
1266 | 2560 | 2.367241 | TCAACGAGGTCAGTGGATTGAA | 59.633 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
1268 | 2562 | 2.455674 | TCAACGAGGTCAGTGGATTG | 57.544 | 50.000 | 0.00 | 0.00 | 0.00 | 2.67 |
1269 | 2563 | 2.834549 | AGATCAACGAGGTCAGTGGATT | 59.165 | 45.455 | 0.00 | 0.00 | 32.75 | 3.01 |
1270 | 2564 | 2.461695 | AGATCAACGAGGTCAGTGGAT | 58.538 | 47.619 | 0.00 | 0.00 | 35.13 | 3.41 |
1271 | 2565 | 1.924731 | AGATCAACGAGGTCAGTGGA | 58.075 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1272 | 2566 | 2.029020 | TGAAGATCAACGAGGTCAGTGG | 60.029 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1274 | 2568 | 2.232452 | CCTGAAGATCAACGAGGTCAGT | 59.768 | 50.000 | 0.00 | 0.00 | 32.41 | 3.41 |
1275 | 2569 | 2.417924 | CCCTGAAGATCAACGAGGTCAG | 60.418 | 54.545 | 0.00 | 0.00 | 33.77 | 3.51 |
1277 | 2571 | 1.740718 | GCCCTGAAGATCAACGAGGTC | 60.741 | 57.143 | 0.00 | 0.00 | 0.00 | 3.85 |
1278 | 2572 | 0.250513 | GCCCTGAAGATCAACGAGGT | 59.749 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1280 | 2574 | 0.108615 | ACGCCCTGAAGATCAACGAG | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1281 | 2575 | 0.389817 | CACGCCCTGAAGATCAACGA | 60.390 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1282 | 2576 | 0.389817 | TCACGCCCTGAAGATCAACG | 60.390 | 55.000 | 0.00 | 0.00 | 0.00 | 4.10 |
1283 | 2577 | 1.667724 | CATCACGCCCTGAAGATCAAC | 59.332 | 52.381 | 0.00 | 0.00 | 30.60 | 3.18 |
1284 | 2578 | 1.407299 | CCATCACGCCCTGAAGATCAA | 60.407 | 52.381 | 0.00 | 0.00 | 30.60 | 2.57 |
1285 | 2579 | 0.178767 | CCATCACGCCCTGAAGATCA | 59.821 | 55.000 | 0.00 | 0.00 | 30.60 | 2.92 |
1286 | 2580 | 0.465705 | TCCATCACGCCCTGAAGATC | 59.534 | 55.000 | 0.00 | 0.00 | 30.60 | 2.75 |
1291 | 2585 | 3.083349 | CCCTCCATCACGCCCTGA | 61.083 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1450 | 2762 | 3.961408 | AGTATGGGTAGACGAGCATCTTT | 59.039 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
1468 | 2780 | 1.077716 | GCTGCCGTTGGGGAAGTAT | 60.078 | 57.895 | 0.00 | 0.00 | 44.43 | 2.12 |
1610 | 2953 | 4.355543 | TTCAGCCGAAATAGCATGAAAC | 57.644 | 40.909 | 0.00 | 0.00 | 30.10 | 2.78 |
1617 | 2960 | 4.419522 | TGAAGTTTTCAGCCGAAATAGC | 57.580 | 40.909 | 0.00 | 0.00 | 40.75 | 2.97 |
1669 | 3012 | 5.922546 | TGAATTTACTGAAATCGTTCCGTG | 58.077 | 37.500 | 0.00 | 0.00 | 34.01 | 4.94 |
1672 | 3015 | 6.072673 | ACCACTGAATTTACTGAAATCGTTCC | 60.073 | 38.462 | 0.00 | 0.00 | 34.01 | 3.62 |
1718 | 3061 | 7.490725 | TGTTGACACGAAAATTCAATTGTCATT | 59.509 | 29.630 | 16.59 | 2.81 | 39.14 | 2.57 |
1719 | 3062 | 6.977502 | TGTTGACACGAAAATTCAATTGTCAT | 59.022 | 30.769 | 16.59 | 0.00 | 39.14 | 3.06 |
1720 | 3063 | 6.325596 | TGTTGACACGAAAATTCAATTGTCA | 58.674 | 32.000 | 5.13 | 13.84 | 38.38 | 3.58 |
1732 | 3075 | 2.159448 | CCAAACTGCTGTTGACACGAAA | 60.159 | 45.455 | 9.95 | 0.00 | 36.39 | 3.46 |
1777 | 3120 | 4.141620 | ACCTGACATCAACTCAAGACTTGT | 60.142 | 41.667 | 14.75 | 0.00 | 0.00 | 3.16 |
1839 | 3182 | 4.199310 | TGATAATACTTGGAACCAGCTGC | 58.801 | 43.478 | 8.66 | 0.00 | 0.00 | 5.25 |
1931 | 3274 | 4.826274 | TCCTAATCAAGAACTGGTCTGG | 57.174 | 45.455 | 0.00 | 0.00 | 36.40 | 3.86 |
2049 | 3399 | 3.131223 | TGCAGTAGACTCAAGAGGCATAC | 59.869 | 47.826 | 5.61 | 5.30 | 39.50 | 2.39 |
2065 | 3415 | 5.412594 | GTGTTTGAGATCCTTTCATGCAGTA | 59.587 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2220 | 3718 | 9.920133 | TTGATTGTTATGCAGCTGTAATTTTTA | 57.080 | 25.926 | 16.64 | 0.00 | 0.00 | 1.52 |
2269 | 3767 | 3.427503 | CCAAAAGTTCTTTCGTGTGCTGT | 60.428 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
2363 | 3862 | 9.840427 | AATCGATTGTTAGGAAACTGTAATTTG | 57.160 | 29.630 | 10.50 | 0.00 | 43.88 | 2.32 |
2372 | 3872 | 4.394920 | TGCAGGAATCGATTGTTAGGAAAC | 59.605 | 41.667 | 16.96 | 0.00 | 36.07 | 2.78 |
2401 | 3901 | 9.665719 | TCTTCTATGCTCTGTATACTGATCTAG | 57.334 | 37.037 | 12.29 | 12.35 | 0.00 | 2.43 |
2402 | 3902 | 9.665719 | CTCTTCTATGCTCTGTATACTGATCTA | 57.334 | 37.037 | 12.29 | 3.76 | 0.00 | 1.98 |
2455 | 3955 | 2.868583 | CCCTGTCTGAAAGTATGCGATG | 59.131 | 50.000 | 0.00 | 0.00 | 33.76 | 3.84 |
2461 | 3962 | 4.714308 | CCTCTTCTCCCTGTCTGAAAGTAT | 59.286 | 45.833 | 0.00 | 0.00 | 33.76 | 2.12 |
2616 | 4117 | 2.363683 | GAGATCTTGGGGTTCAGCTTG | 58.636 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
2682 | 4183 | 2.872038 | GCCAGAGATCCTGAACGTGTTT | 60.872 | 50.000 | 11.48 | 0.00 | 45.78 | 2.83 |
2727 | 4228 | 5.982890 | AAACCTATTGAATGGAAGTGGTG | 57.017 | 39.130 | 0.00 | 0.00 | 0.00 | 4.17 |
2784 | 4289 | 6.322712 | GGGCCATATAACCACTACAAAAATCA | 59.677 | 38.462 | 4.39 | 0.00 | 0.00 | 2.57 |
3019 | 4524 | 1.553704 | TCAGCACATCAGAGCATGTCT | 59.446 | 47.619 | 0.00 | 0.00 | 34.60 | 3.41 |
3023 | 4528 | 3.345508 | TTCTTCAGCACATCAGAGCAT | 57.654 | 42.857 | 0.00 | 0.00 | 33.43 | 3.79 |
3024 | 4529 | 2.845363 | TTCTTCAGCACATCAGAGCA | 57.155 | 45.000 | 0.00 | 0.00 | 33.43 | 4.26 |
3025 | 4530 | 3.688185 | TGAATTCTTCAGCACATCAGAGC | 59.312 | 43.478 | 7.05 | 0.00 | 34.08 | 4.09 |
3026 | 4531 | 5.874895 | TTGAATTCTTCAGCACATCAGAG | 57.125 | 39.130 | 7.05 | 0.00 | 41.38 | 3.35 |
3027 | 4532 | 6.829229 | AATTGAATTCTTCAGCACATCAGA | 57.171 | 33.333 | 7.05 | 0.00 | 41.38 | 3.27 |
3028 | 4533 | 8.188799 | ACATAATTGAATTCTTCAGCACATCAG | 58.811 | 33.333 | 7.05 | 0.00 | 41.38 | 2.90 |
3048 | 4584 | 8.408043 | TCCATGTCTGAAAGTTTCAACATAAT | 57.592 | 30.769 | 27.32 | 15.76 | 38.31 | 1.28 |
3049 | 4585 | 7.815840 | TCCATGTCTGAAAGTTTCAACATAA | 57.184 | 32.000 | 27.32 | 20.94 | 38.31 | 1.90 |
3054 | 4590 | 4.889409 | AGCTTCCATGTCTGAAAGTTTCAA | 59.111 | 37.500 | 18.55 | 5.42 | 39.58 | 2.69 |
3393 | 4929 | 2.609427 | TCCTGGATTCATCTTCAGCG | 57.391 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
3457 | 4993 | 7.148272 | ACACCGTCTGATTTCTTACTAGAGTAC | 60.148 | 40.741 | 0.00 | 0.00 | 0.00 | 2.73 |
3525 | 5061 | 2.363680 | CCATCACTGCCTCCTGTACTAG | 59.636 | 54.545 | 0.00 | 0.00 | 0.00 | 2.57 |
3543 | 5079 | 3.483954 | CGGATGCTTCTGGAACCAT | 57.516 | 52.632 | 0.38 | 0.00 | 0.00 | 3.55 |
3552 | 5312 | 1.468914 | GAAAACTGGACCGGATGCTTC | 59.531 | 52.381 | 9.46 | 0.00 | 0.00 | 3.86 |
3561 | 5321 | 4.906065 | AACGGTAAAAGAAAACTGGACC | 57.094 | 40.909 | 0.00 | 0.00 | 0.00 | 4.46 |
3580 | 5340 | 9.193133 | GGAGAAAATGGAAAAGCTAGTAAAAAC | 57.807 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
3586 | 5346 | 5.635120 | ACAGGAGAAAATGGAAAAGCTAGT | 58.365 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
3622 | 5382 | 8.900983 | TTTCCAAATAAACCCTGAAATTTCTG | 57.099 | 30.769 | 18.64 | 17.22 | 0.00 | 3.02 |
3633 | 5393 | 8.846943 | ACATTTTCTGATTTCCAAATAAACCC | 57.153 | 30.769 | 0.00 | 0.00 | 0.00 | 4.11 |
3692 | 5452 | 9.426837 | CTCCATTTTGCAAAAAGAATCATTCTA | 57.573 | 29.630 | 27.10 | 1.16 | 39.61 | 2.10 |
3693 | 5453 | 8.152246 | TCTCCATTTTGCAAAAAGAATCATTCT | 58.848 | 29.630 | 27.10 | 5.17 | 43.15 | 2.40 |
3694 | 5454 | 8.314143 | TCTCCATTTTGCAAAAAGAATCATTC | 57.686 | 30.769 | 27.10 | 0.00 | 0.00 | 2.67 |
3696 | 5456 | 7.935210 | AGTTCTCCATTTTGCAAAAAGAATCAT | 59.065 | 29.630 | 27.61 | 18.85 | 29.92 | 2.45 |
3698 | 5458 | 7.719778 | AGTTCTCCATTTTGCAAAAAGAATC | 57.280 | 32.000 | 27.61 | 22.31 | 29.92 | 2.52 |
3700 | 5460 | 7.920160 | AAAGTTCTCCATTTTGCAAAAAGAA | 57.080 | 28.000 | 27.10 | 25.23 | 0.00 | 2.52 |
3701 | 5461 | 7.605691 | TCAAAAGTTCTCCATTTTGCAAAAAGA | 59.394 | 29.630 | 27.10 | 23.24 | 43.09 | 2.52 |
3702 | 5462 | 7.750769 | TCAAAAGTTCTCCATTTTGCAAAAAG | 58.249 | 30.769 | 27.10 | 22.28 | 43.09 | 2.27 |
3741 | 5503 | 4.754618 | AGCAAATTTCAAAAATCCCGAACC | 59.245 | 37.500 | 0.00 | 0.00 | 0.00 | 3.62 |
3762 | 5524 | 7.440856 | TCTGAACCAAATTTGAAATTACCAAGC | 59.559 | 33.333 | 19.86 | 0.00 | 0.00 | 4.01 |
3924 | 5712 | 9.922305 | GAGATGTAATATAGTGTGTTTTTGCTC | 57.078 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
3925 | 5713 | 9.448438 | TGAGATGTAATATAGTGTGTTTTTGCT | 57.552 | 29.630 | 0.00 | 0.00 | 0.00 | 3.91 |
3926 | 5714 | 9.490663 | GTGAGATGTAATATAGTGTGTTTTTGC | 57.509 | 33.333 | 0.00 | 0.00 | 0.00 | 3.68 |
3988 | 5776 | 1.049402 | GGCACCCCTAACTAGGCTAG | 58.951 | 60.000 | 19.83 | 19.83 | 42.26 | 3.42 |
3990 | 5778 | 4.068257 | GGCACCCCTAACTAGGCT | 57.932 | 61.111 | 0.00 | 0.00 | 42.26 | 4.58 |
4030 | 5818 | 7.919313 | TCGGAATACAAAGATATAACACGTC | 57.081 | 36.000 | 0.00 | 0.00 | 0.00 | 4.34 |
4031 | 5819 | 8.139350 | TCATCGGAATACAAAGATATAACACGT | 58.861 | 33.333 | 0.00 | 0.00 | 0.00 | 4.49 |
4094 | 5897 | 9.935682 | CTTATTTGACGTATAGTGCATCAATTT | 57.064 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
4096 | 5899 | 7.226523 | TGCTTATTTGACGTATAGTGCATCAAT | 59.773 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
4101 | 5904 | 6.018262 | GGATTGCTTATTTGACGTATAGTGCA | 60.018 | 38.462 | 0.00 | 0.00 | 0.00 | 4.57 |
4105 | 5908 | 5.389516 | GCGGGATTGCTTATTTGACGTATAG | 60.390 | 44.000 | 0.00 | 0.00 | 0.00 | 1.31 |
4106 | 5909 | 4.449743 | GCGGGATTGCTTATTTGACGTATA | 59.550 | 41.667 | 0.00 | 0.00 | 0.00 | 1.47 |
4109 | 5912 | 1.400494 | GCGGGATTGCTTATTTGACGT | 59.600 | 47.619 | 0.00 | 0.00 | 0.00 | 4.34 |
4120 | 5923 | 2.409870 | CCAGGACTTGCGGGATTGC | 61.410 | 63.158 | 0.00 | 0.00 | 0.00 | 3.56 |
4121 | 5924 | 2.409870 | GCCAGGACTTGCGGGATTG | 61.410 | 63.158 | 0.00 | 0.00 | 0.00 | 2.67 |
4122 | 5925 | 2.044946 | GCCAGGACTTGCGGGATT | 60.045 | 61.111 | 0.00 | 0.00 | 0.00 | 3.01 |
4123 | 5926 | 2.683465 | ATGCCAGGACTTGCGGGAT | 61.683 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
4131 | 5934 | 0.111061 | TGCTTTGTCATGCCAGGACT | 59.889 | 50.000 | 11.14 | 0.00 | 36.26 | 3.85 |
4139 | 5942 | 3.366273 | GGTGTATGTGGTGCTTTGTCATG | 60.366 | 47.826 | 0.00 | 0.00 | 0.00 | 3.07 |
4143 | 5946 | 2.656947 | AGGTGTATGTGGTGCTTTGT | 57.343 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
4153 | 5956 | 3.389866 | TGGCCCACTAATAGGTGTATGT | 58.610 | 45.455 | 0.00 | 0.00 | 35.63 | 2.29 |
4154 | 5957 | 4.640771 | ATGGCCCACTAATAGGTGTATG | 57.359 | 45.455 | 0.00 | 0.00 | 35.63 | 2.39 |
4155 | 5958 | 5.663158 | AAATGGCCCACTAATAGGTGTAT | 57.337 | 39.130 | 0.00 | 0.00 | 35.63 | 2.29 |
4157 | 5960 | 4.278310 | GAAAATGGCCCACTAATAGGTGT | 58.722 | 43.478 | 0.00 | 0.00 | 35.63 | 4.16 |
4158 | 5961 | 3.636764 | GGAAAATGGCCCACTAATAGGTG | 59.363 | 47.826 | 0.00 | 0.00 | 37.00 | 4.00 |
4159 | 5962 | 3.687264 | CGGAAAATGGCCCACTAATAGGT | 60.687 | 47.826 | 0.00 | 0.00 | 0.00 | 3.08 |
4186 | 5989 | 0.541863 | GATGTCCACCCAATCGAGGT | 59.458 | 55.000 | 0.00 | 0.00 | 38.48 | 3.85 |
4190 | 5993 | 0.726827 | CAACGATGTCCACCCAATCG | 59.273 | 55.000 | 2.96 | 2.96 | 40.21 | 3.34 |
4209 | 6012 | 3.384532 | CAACCATGGGCAGGGCAC | 61.385 | 66.667 | 18.09 | 0.00 | 35.25 | 5.01 |
4213 | 6016 | 0.331278 | TTACCTCAACCATGGGCAGG | 59.669 | 55.000 | 18.09 | 18.97 | 0.00 | 4.85 |
4217 | 6020 | 4.580580 | GCTAGAAATTACCTCAACCATGGG | 59.419 | 45.833 | 18.09 | 0.00 | 0.00 | 4.00 |
4219 | 6022 | 4.876107 | ACGCTAGAAATTACCTCAACCATG | 59.124 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
4221 | 6024 | 4.546829 | ACGCTAGAAATTACCTCAACCA | 57.453 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
4222 | 6025 | 5.874895 | AAACGCTAGAAATTACCTCAACC | 57.125 | 39.130 | 0.00 | 0.00 | 0.00 | 3.77 |
4223 | 6026 | 7.743400 | GTGTTAAACGCTAGAAATTACCTCAAC | 59.257 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
4224 | 6027 | 7.441760 | TGTGTTAAACGCTAGAAATTACCTCAA | 59.558 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
4225 | 6028 | 6.930164 | TGTGTTAAACGCTAGAAATTACCTCA | 59.070 | 34.615 | 0.00 | 0.00 | 0.00 | 3.86 |
4226 | 6029 | 7.355332 | TGTGTTAAACGCTAGAAATTACCTC | 57.645 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4227 | 6030 | 7.822822 | AGATGTGTTAAACGCTAGAAATTACCT | 59.177 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
4228 | 6031 | 7.971455 | AGATGTGTTAAACGCTAGAAATTACC | 58.029 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
4235 | 6038 | 9.678941 | CTCATATAAGATGTGTTAAACGCTAGA | 57.321 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
4236 | 6039 | 8.428536 | GCTCATATAAGATGTGTTAAACGCTAG | 58.571 | 37.037 | 0.00 | 0.00 | 0.00 | 3.42 |
4237 | 6040 | 8.141909 | AGCTCATATAAGATGTGTTAAACGCTA | 58.858 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
4238 | 6041 | 6.986817 | AGCTCATATAAGATGTGTTAAACGCT | 59.013 | 34.615 | 0.00 | 0.00 | 0.00 | 5.07 |
4239 | 6042 | 7.178712 | AGCTCATATAAGATGTGTTAAACGC | 57.821 | 36.000 | 0.00 | 0.00 | 0.00 | 4.84 |
4240 | 6043 | 9.244799 | TGTAGCTCATATAAGATGTGTTAAACG | 57.755 | 33.333 | 0.00 | 0.00 | 0.00 | 3.60 |
4270 | 6073 | 7.703058 | ATTAGTTTTGACTAATTGGAGTGGG | 57.297 | 36.000 | 6.09 | 0.00 | 39.18 | 4.61 |
4283 | 6086 | 5.107133 | TGTCGCTAGCCTATTAGTTTTGAC | 58.893 | 41.667 | 9.66 | 6.59 | 0.00 | 3.18 |
4290 | 6093 | 4.521130 | TGGAATGTCGCTAGCCTATTAG | 57.479 | 45.455 | 9.66 | 0.00 | 0.00 | 1.73 |
4295 | 6098 | 2.320781 | ACTATGGAATGTCGCTAGCCT | 58.679 | 47.619 | 9.66 | 0.00 | 0.00 | 4.58 |
4296 | 6099 | 2.821991 | ACTATGGAATGTCGCTAGCC | 57.178 | 50.000 | 9.66 | 0.00 | 0.00 | 3.93 |
4304 | 6107 | 6.549433 | TTCCGGTACTAAACTATGGAATGT | 57.451 | 37.500 | 0.00 | 0.00 | 32.58 | 2.71 |
4343 | 6146 | 1.065418 | GGAATCACACACTACTGGGGG | 60.065 | 57.143 | 0.00 | 0.00 | 0.00 | 5.40 |
4344 | 6147 | 1.909302 | AGGAATCACACACTACTGGGG | 59.091 | 52.381 | 0.00 | 0.00 | 0.00 | 4.96 |
4345 | 6148 | 5.359194 | AATAGGAATCACACACTACTGGG | 57.641 | 43.478 | 0.00 | 0.00 | 0.00 | 4.45 |
4346 | 6149 | 5.043903 | CGAATAGGAATCACACACTACTGG | 58.956 | 45.833 | 0.00 | 0.00 | 0.00 | 4.00 |
4347 | 6150 | 5.651530 | ACGAATAGGAATCACACACTACTG | 58.348 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
4348 | 6151 | 5.417894 | TGACGAATAGGAATCACACACTACT | 59.582 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
4349 | 6152 | 5.515626 | GTGACGAATAGGAATCACACACTAC | 59.484 | 44.000 | 0.00 | 0.00 | 40.95 | 2.73 |
4350 | 6153 | 5.393787 | GGTGACGAATAGGAATCACACACTA | 60.394 | 44.000 | 5.66 | 0.00 | 42.66 | 2.74 |
4351 | 6154 | 4.495422 | GTGACGAATAGGAATCACACACT | 58.505 | 43.478 | 0.00 | 0.00 | 40.95 | 3.55 |
4352 | 6155 | 3.617263 | GGTGACGAATAGGAATCACACAC | 59.383 | 47.826 | 5.66 | 0.00 | 42.66 | 3.82 |
4353 | 6156 | 3.259625 | TGGTGACGAATAGGAATCACACA | 59.740 | 43.478 | 5.66 | 0.00 | 42.66 | 3.72 |
4354 | 6157 | 3.857052 | TGGTGACGAATAGGAATCACAC | 58.143 | 45.455 | 5.66 | 0.00 | 42.66 | 3.82 |
4355 | 6158 | 4.250464 | GTTGGTGACGAATAGGAATCACA | 58.750 | 43.478 | 5.66 | 0.00 | 42.66 | 3.58 |
4356 | 6159 | 4.250464 | TGTTGGTGACGAATAGGAATCAC | 58.750 | 43.478 | 0.00 | 0.00 | 40.62 | 3.06 |
4357 | 6160 | 4.545208 | TGTTGGTGACGAATAGGAATCA | 57.455 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
4358 | 6161 | 4.332819 | CCTTGTTGGTGACGAATAGGAATC | 59.667 | 45.833 | 5.84 | 0.00 | 0.00 | 2.52 |
4359 | 6162 | 4.019681 | TCCTTGTTGGTGACGAATAGGAAT | 60.020 | 41.667 | 10.23 | 0.00 | 37.07 | 3.01 |
4360 | 6163 | 3.325425 | TCCTTGTTGGTGACGAATAGGAA | 59.675 | 43.478 | 10.23 | 0.00 | 37.07 | 3.36 |
4361 | 6164 | 2.901192 | TCCTTGTTGGTGACGAATAGGA | 59.099 | 45.455 | 9.09 | 9.09 | 37.07 | 2.94 |
4362 | 6165 | 3.056107 | TCTCCTTGTTGGTGACGAATAGG | 60.056 | 47.826 | 0.00 | 5.51 | 33.81 | 2.57 |
4363 | 6166 | 4.188247 | TCTCCTTGTTGGTGACGAATAG | 57.812 | 45.455 | 0.00 | 0.00 | 33.81 | 1.73 |
4364 | 6167 | 4.610605 | TTCTCCTTGTTGGTGACGAATA | 57.389 | 40.909 | 0.00 | 0.00 | 37.98 | 1.75 |
4365 | 6168 | 3.485463 | TTCTCCTTGTTGGTGACGAAT | 57.515 | 42.857 | 0.00 | 0.00 | 37.98 | 3.34 |
4366 | 6169 | 2.992124 | TTCTCCTTGTTGGTGACGAA | 57.008 | 45.000 | 0.00 | 0.00 | 37.98 | 3.85 |
4367 | 6170 | 2.992124 | TTTCTCCTTGTTGGTGACGA | 57.008 | 45.000 | 0.00 | 0.00 | 37.98 | 4.20 |
4368 | 6171 | 4.513692 | TGTAATTTCTCCTTGTTGGTGACG | 59.486 | 41.667 | 0.00 | 0.00 | 37.98 | 4.35 |
4369 | 6172 | 6.183360 | TGTTGTAATTTCTCCTTGTTGGTGAC | 60.183 | 38.462 | 0.00 | 0.00 | 37.98 | 3.67 |
4370 | 6173 | 5.888724 | TGTTGTAATTTCTCCTTGTTGGTGA | 59.111 | 36.000 | 0.00 | 0.00 | 36.63 | 4.02 |
4371 | 6174 | 6.142818 | TGTTGTAATTTCTCCTTGTTGGTG | 57.857 | 37.500 | 0.00 | 0.00 | 37.07 | 4.17 |
4372 | 6175 | 6.783708 | TTGTTGTAATTTCTCCTTGTTGGT | 57.216 | 33.333 | 0.00 | 0.00 | 37.07 | 3.67 |
4373 | 6176 | 7.114811 | CGATTTGTTGTAATTTCTCCTTGTTGG | 59.885 | 37.037 | 0.00 | 0.00 | 37.10 | 3.77 |
4374 | 6177 | 7.358352 | GCGATTTGTTGTAATTTCTCCTTGTTG | 60.358 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
4375 | 6178 | 6.640907 | GCGATTTGTTGTAATTTCTCCTTGTT | 59.359 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
4376 | 6179 | 6.149633 | GCGATTTGTTGTAATTTCTCCTTGT | 58.850 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4383 | 6546 | 8.915654 | AGATTTTCTGCGATTTGTTGTAATTTC | 58.084 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
4399 | 6562 | 4.870991 | AGGTAAAGTCGCTAGATTTTCTGC | 59.129 | 41.667 | 0.00 | 0.00 | 37.47 | 4.26 |
4406 | 6569 | 1.536284 | GCGCAGGTAAAGTCGCTAGAT | 60.536 | 52.381 | 0.30 | 0.00 | 43.70 | 1.98 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.