Multiple sequence alignment - TraesCS3D01G035600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G035600 chr3D 100.000 2517 0 0 1 2517 12878285 12880801 0.000000e+00 4649.0
1 TraesCS3D01G035600 chr3B 85.021 948 71 25 825 1764 18517909 18518793 0.000000e+00 898.0
2 TraesCS3D01G035600 chr3B 83.730 756 62 23 811 1554 18490281 18490987 0.000000e+00 658.0
3 TraesCS3D01G035600 chr3B 86.833 562 60 6 1657 2217 18494896 18495444 1.280000e-172 616.0
4 TraesCS3D01G035600 chr3B 85.825 515 55 7 49 556 18485851 18486354 4.770000e-147 531.0
5 TraesCS3D01G035600 chr3B 84.576 389 46 10 364 748 18487182 18487560 8.500000e-100 374.0
6 TraesCS3D01G035600 chr3B 90.722 97 9 0 642 738 18391778 18391874 2.030000e-26 130.0
7 TraesCS3D01G035600 chr3A 84.725 910 77 29 797 1689 24538683 24537819 0.000000e+00 854.0
8 TraesCS3D01G035600 chr3A 83.716 522 65 11 1650 2168 24525978 24525474 2.270000e-130 475.0
9 TraesCS3D01G035600 chr3A 85.492 386 24 13 1290 1671 24526494 24526137 8.500000e-100 374.0
10 TraesCS3D01G035600 chr3A 84.848 297 29 7 834 1126 24526883 24526599 4.100000e-73 285.0
11 TraesCS3D01G035600 chr3A 88.636 220 18 2 2305 2517 24514773 24514554 6.910000e-66 261.0
12 TraesCS3D01G035600 chr3A 92.233 103 8 0 606 708 24527131 24527029 2.020000e-31 147.0
13 TraesCS3D01G035600 chr3A 93.617 47 1 2 2262 2307 24516185 24516140 4.490000e-08 69.4
14 TraesCS3D01G035600 chr3A 93.617 47 1 2 2262 2307 24523262 24523217 4.490000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G035600 chr3D 12878285 12880801 2516 False 4649.00 4649 100.0000 1 2517 1 chr3D.!!$F1 2516
1 TraesCS3D01G035600 chr3B 18517909 18518793 884 False 898.00 898 85.0210 825 1764 1 chr3B.!!$F2 939
2 TraesCS3D01G035600 chr3B 18485851 18495444 9593 False 544.75 658 85.2410 49 2217 4 chr3B.!!$F3 2168
3 TraesCS3D01G035600 chr3A 24537819 24538683 864 True 854.00 854 84.7250 797 1689 1 chr3A.!!$R1 892
4 TraesCS3D01G035600 chr3A 24523217 24527131 3914 True 270.08 475 87.9812 606 2307 5 chr3A.!!$R3 1701

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
313 319 0.029567 CACGTGATAGCCTCCGTCTC 59.97 60.0 10.9 0.0 31.26 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2233 12129 0.036306 TTTTGAGCCCGAGACTTCCC 59.964 55.0 0.0 0.0 0.0 3.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.699839 CAAATAGTTTGACCTACCTTGTGC 58.300 41.667 0.00 0.00 43.26 4.57
24 25 2.271944 AGTTTGACCTACCTTGTGCC 57.728 50.000 0.00 0.00 0.00 5.01
25 26 1.493022 AGTTTGACCTACCTTGTGCCA 59.507 47.619 0.00 0.00 0.00 4.92
26 27 2.092103 AGTTTGACCTACCTTGTGCCAA 60.092 45.455 0.00 0.00 0.00 4.52
27 28 2.691011 GTTTGACCTACCTTGTGCCAAA 59.309 45.455 0.00 0.00 0.00 3.28
28 29 2.738587 TGACCTACCTTGTGCCAAAA 57.261 45.000 0.00 0.00 0.00 2.44
29 30 2.582052 TGACCTACCTTGTGCCAAAAG 58.418 47.619 0.00 0.00 0.00 2.27
31 32 1.497286 ACCTACCTTGTGCCAAAAGGA 59.503 47.619 20.74 3.41 46.08 3.36
32 33 2.110011 ACCTACCTTGTGCCAAAAGGAT 59.890 45.455 20.74 7.25 46.08 3.24
33 34 3.332485 ACCTACCTTGTGCCAAAAGGATA 59.668 43.478 20.74 7.98 46.08 2.59
34 35 4.202631 ACCTACCTTGTGCCAAAAGGATAA 60.203 41.667 20.74 4.54 46.08 1.75
35 36 4.956075 CCTACCTTGTGCCAAAAGGATAAT 59.044 41.667 20.74 0.06 46.08 1.28
36 37 5.067805 CCTACCTTGTGCCAAAAGGATAATC 59.932 44.000 20.74 0.00 46.08 1.75
37 38 4.677182 ACCTTGTGCCAAAAGGATAATCT 58.323 39.130 20.74 0.00 46.08 2.40
38 39 4.706962 ACCTTGTGCCAAAAGGATAATCTC 59.293 41.667 20.74 0.00 46.08 2.75
39 40 4.706476 CCTTGTGCCAAAAGGATAATCTCA 59.294 41.667 8.03 0.00 46.08 3.27
40 41 5.163581 CCTTGTGCCAAAAGGATAATCTCAG 60.164 44.000 8.03 0.00 46.08 3.35
41 42 3.696051 TGTGCCAAAAGGATAATCTCAGC 59.304 43.478 0.00 0.00 0.00 4.26
42 43 2.945008 TGCCAAAAGGATAATCTCAGCG 59.055 45.455 0.00 0.00 0.00 5.18
43 44 3.206150 GCCAAAAGGATAATCTCAGCGA 58.794 45.455 0.00 0.00 0.00 4.93
44 45 3.627577 GCCAAAAGGATAATCTCAGCGAA 59.372 43.478 0.00 0.00 0.00 4.70
45 46 4.260948 GCCAAAAGGATAATCTCAGCGAAG 60.261 45.833 0.00 0.00 0.00 3.79
75 76 1.229428 GCATGTCCATCACCCATACG 58.771 55.000 0.00 0.00 0.00 3.06
99 100 2.094752 ACATTTTGCCGAGTACAATGCC 60.095 45.455 0.00 0.00 0.00 4.40
102 103 0.739462 TTGCCGAGTACAATGCCGAG 60.739 55.000 0.00 0.00 0.00 4.63
116 117 0.528684 GCCGAGTATCTCAGCACACC 60.529 60.000 0.84 0.00 34.40 4.16
119 120 2.534298 CGAGTATCTCAGCACACCTTG 58.466 52.381 0.00 0.00 0.00 3.61
128 129 1.966451 GCACACCTTGGTTCTCGGG 60.966 63.158 0.00 0.00 0.00 5.14
135 136 3.877508 CACCTTGGTTCTCGGGAAATATC 59.122 47.826 0.00 0.00 32.81 1.63
136 137 3.521937 ACCTTGGTTCTCGGGAAATATCA 59.478 43.478 0.00 0.00 32.81 2.15
145 146 3.462982 TCGGGAAATATCATTGGTCACG 58.537 45.455 0.00 0.00 36.47 4.35
155 156 0.387929 ATTGGTCACGTGACAGTCGT 59.612 50.000 40.51 22.98 46.47 4.34
161 162 3.839654 ACGTGACAGTCGTGTGTAG 57.160 52.632 0.00 0.00 40.07 2.74
163 164 0.386858 CGTGACAGTCGTGTGTAGGG 60.387 60.000 0.00 0.00 36.88 3.53
164 165 0.956633 GTGACAGTCGTGTGTAGGGA 59.043 55.000 0.00 0.00 36.88 4.20
166 167 2.029290 GTGACAGTCGTGTGTAGGGATT 60.029 50.000 0.00 0.00 36.88 3.01
168 169 2.993899 GACAGTCGTGTGTAGGGATTTG 59.006 50.000 0.00 0.00 36.88 2.32
169 170 2.367567 ACAGTCGTGTGTAGGGATTTGT 59.632 45.455 0.00 0.00 34.75 2.83
170 171 2.993899 CAGTCGTGTGTAGGGATTTGTC 59.006 50.000 0.00 0.00 0.00 3.18
186 192 7.176690 AGGGATTTGTCGAGTATTTTGTTTCAT 59.823 33.333 0.00 0.00 0.00 2.57
204 210 0.248661 ATGTCTCGGCGAAGATGACG 60.249 55.000 12.13 0.00 0.00 4.35
266 272 1.153353 TCAAATTCGCCGAGTTCCAC 58.847 50.000 0.00 0.00 0.00 4.02
276 282 1.616865 CCGAGTTCCACTGTCTGGTTA 59.383 52.381 0.00 0.00 41.52 2.85
278 284 3.512680 CGAGTTCCACTGTCTGGTTATC 58.487 50.000 0.00 0.00 41.52 1.75
301 307 1.536766 CAAAGTCACATGCCACGTGAT 59.463 47.619 19.30 0.00 44.70 3.06
306 312 0.462581 CACATGCCACGTGATAGCCT 60.463 55.000 19.30 1.84 36.43 4.58
312 318 1.384989 CCACGTGATAGCCTCCGTCT 61.385 60.000 19.30 0.00 31.26 4.18
313 319 0.029567 CACGTGATAGCCTCCGTCTC 59.970 60.000 10.90 0.00 31.26 3.36
314 320 1.102222 ACGTGATAGCCTCCGTCTCC 61.102 60.000 0.00 0.00 0.00 3.71
315 321 1.655329 GTGATAGCCTCCGTCTCCG 59.345 63.158 0.00 0.00 0.00 4.63
356 362 0.319211 TTTGTGCCGAGTACTCCACG 60.319 55.000 17.23 6.39 0.00 4.94
387 393 2.742372 CTGGTTTGCCGAGTCCCG 60.742 66.667 0.00 0.00 37.67 5.14
388 394 3.234630 CTGGTTTGCCGAGTCCCGA 62.235 63.158 0.00 0.00 41.76 5.14
389 395 2.741211 GGTTTGCCGAGTCCCGAC 60.741 66.667 0.00 0.00 41.76 4.79
390 396 3.110178 GTTTGCCGAGTCCCGACG 61.110 66.667 0.00 0.00 41.76 5.12
409 1437 1.079875 GGACGGCGCTCGACAAAATA 61.080 55.000 22.10 0.00 42.43 1.40
416 1444 2.350498 GCGCTCGACAAAATAGGCTTTA 59.650 45.455 0.00 0.00 0.00 1.85
418 1446 3.242316 CGCTCGACAAAATAGGCTTTACC 60.242 47.826 0.00 0.00 39.61 2.85
429 1457 1.087501 GGCTTTACCTGAAGGCTTCG 58.912 55.000 21.42 15.53 45.66 3.79
430 1458 1.087501 GCTTTACCTGAAGGCTTCGG 58.912 55.000 25.92 25.92 37.18 4.30
431 1459 1.087501 CTTTACCTGAAGGCTTCGGC 58.912 55.000 27.16 4.02 39.32 5.54
451 1479 1.192428 CCGAGTACCCTTAGCCAAGT 58.808 55.000 0.00 0.00 0.00 3.16
452 1480 2.381911 CCGAGTACCCTTAGCCAAGTA 58.618 52.381 0.00 0.00 0.00 2.24
456 1484 4.036144 CGAGTACCCTTAGCCAAGTACTAC 59.964 50.000 0.00 0.00 44.06 2.73
458 1486 5.336102 AGTACCCTTAGCCAAGTACTACAA 58.664 41.667 0.00 0.00 42.66 2.41
461 1489 4.781087 ACCCTTAGCCAAGTACTACAATCA 59.219 41.667 0.00 0.00 0.00 2.57
463 1491 4.811557 CCTTAGCCAAGTACTACAATCAGC 59.188 45.833 0.00 0.00 0.00 4.26
468 1496 4.455877 GCCAAGTACTACAATCAGCAAACT 59.544 41.667 0.00 0.00 0.00 2.66
502 1530 2.607038 GGAACCGCTTTCACCAAATGTC 60.607 50.000 0.00 0.00 35.70 3.06
506 1534 2.432444 CGCTTTCACCAAATGTCCCTA 58.568 47.619 0.00 0.00 0.00 3.53
507 1535 3.016736 CGCTTTCACCAAATGTCCCTAT 58.983 45.455 0.00 0.00 0.00 2.57
520 1548 7.255942 CCAAATGTCCCTATCACTTGAAAAACT 60.256 37.037 0.00 0.00 0.00 2.66
568 1596 0.521735 CCGCTTTAGCCAAGTGTTCC 59.478 55.000 6.16 0.00 40.91 3.62
569 1597 1.523758 CGCTTTAGCCAAGTGTTCCT 58.476 50.000 0.00 0.00 38.10 3.36
571 1599 1.541588 GCTTTAGCCAAGTGTTCCTGG 59.458 52.381 0.00 0.00 34.56 4.45
575 1603 2.908073 GCCAAGTGTTCCTGGCACG 61.908 63.158 8.19 0.00 45.99 5.34
576 1604 1.525995 CCAAGTGTTCCTGGCACGT 60.526 57.895 0.00 0.00 41.36 4.49
671 1699 0.953471 TGCGACCAGATCCGGTTTTG 60.953 55.000 1.17 0.00 40.22 2.44
694 1722 3.928343 CGATTGAGTCGGAGTCTCC 57.072 57.895 9.05 9.05 46.47 3.71
695 1723 1.095600 CGATTGAGTCGGAGTCTCCA 58.904 55.000 19.15 3.46 46.47 3.86
740 1863 3.883489 TGCCTAGATATATCGTCCATCGG 59.117 47.826 7.08 3.21 40.32 4.18
752 1875 3.068560 CGTCCATCGGGTTAAAACTCAA 58.931 45.455 0.00 0.00 35.71 3.02
766 1889 8.843262 GGTTAAAACTCAAAAGAAGCCTACTAA 58.157 33.333 0.00 0.00 0.00 2.24
771 1894 8.691661 AACTCAAAAGAAGCCTACTAATTCAA 57.308 30.769 0.00 0.00 0.00 2.69
772 1895 8.100508 ACTCAAAAGAAGCCTACTAATTCAAC 57.899 34.615 0.00 0.00 0.00 3.18
774 1897 6.148811 TCAAAAGAAGCCTACTAATTCAACGG 59.851 38.462 0.00 0.00 0.00 4.44
775 1898 4.820894 AGAAGCCTACTAATTCAACGGT 57.179 40.909 0.00 0.00 0.00 4.83
779 1902 4.694339 AGCCTACTAATTCAACGGTCATC 58.306 43.478 0.00 0.00 0.00 2.92
780 1903 4.161565 AGCCTACTAATTCAACGGTCATCA 59.838 41.667 0.00 0.00 0.00 3.07
781 1904 4.873827 GCCTACTAATTCAACGGTCATCAA 59.126 41.667 0.00 0.00 0.00 2.57
782 1905 5.006746 GCCTACTAATTCAACGGTCATCAAG 59.993 44.000 0.00 0.00 0.00 3.02
783 1906 4.946784 ACTAATTCAACGGTCATCAAGC 57.053 40.909 0.00 0.00 0.00 4.01
784 1907 3.689649 ACTAATTCAACGGTCATCAAGCC 59.310 43.478 0.00 0.00 0.00 4.35
786 1909 0.109532 TTCAACGGTCATCAAGCCCA 59.890 50.000 0.00 0.00 0.00 5.36
787 1910 0.109532 TCAACGGTCATCAAGCCCAA 59.890 50.000 0.00 0.00 0.00 4.12
788 1911 0.958091 CAACGGTCATCAAGCCCAAA 59.042 50.000 0.00 0.00 0.00 3.28
789 1912 0.958822 AACGGTCATCAAGCCCAAAC 59.041 50.000 0.00 0.00 0.00 2.93
794 1932 2.562298 GGTCATCAAGCCCAAACATGAA 59.438 45.455 0.00 0.00 0.00 2.57
832 4518 8.912988 AGAATAGACTTCTCTCTACATCAAAGG 58.087 37.037 0.00 0.00 0.00 3.11
893 4618 1.482182 TGTCCATCAAGATCTGTCCGG 59.518 52.381 0.00 0.00 0.00 5.14
913 4639 2.264813 GCGACGGTGCTATAAACAGAA 58.735 47.619 0.00 0.00 0.00 3.02
914 4640 2.864343 GCGACGGTGCTATAAACAGAAT 59.136 45.455 0.00 0.00 0.00 2.40
985 4711 9.657121 GAAAGCTAGCAAATATTTGATCTGTAC 57.343 33.333 28.33 12.41 40.55 2.90
991 4717 2.882927 TATTTGATCTGTACCGCGCT 57.117 45.000 5.56 0.00 0.00 5.92
1043 4769 3.044305 GCTGGTGCTTTCGCTCGT 61.044 61.111 0.00 0.00 36.97 4.18
1152 4878 0.104855 TCGGACATGCCACTATCAGC 59.895 55.000 0.00 0.00 35.94 4.26
1168 4898 7.148171 CCACTATCAGCTCAGATCGATATACAA 60.148 40.741 0.00 0.00 0.00 2.41
1169 4899 7.909641 CACTATCAGCTCAGATCGATATACAAG 59.090 40.741 0.00 0.00 0.00 3.16
1197 4927 9.534565 GACTGAGTATGAGAGCATAATTTACAA 57.465 33.333 0.00 0.00 38.64 2.41
1208 4942 8.440833 AGAGCATAATTTACAAAGTTCGTACAC 58.559 33.333 0.00 0.00 0.00 2.90
1233 4979 4.760715 CCATCCATTGATCTCTTGACCATC 59.239 45.833 0.00 0.00 0.00 3.51
1235 4981 5.705397 TCCATTGATCTCTTGACCATCTT 57.295 39.130 0.00 0.00 0.00 2.40
1274 5022 2.436646 CAACAGCACTAGGGGCGG 60.437 66.667 0.00 0.35 36.08 6.13
1348 5096 2.293318 CCAGTGCCTGAGGGTGCTA 61.293 63.158 0.00 0.00 32.44 3.49
1520 5268 2.962253 GCGCCGGCAACTAGCTAG 60.962 66.667 28.98 19.44 44.79 3.42
1521 5269 2.494918 CGCCGGCAACTAGCTAGT 59.505 61.111 28.98 20.95 44.79 2.57
1522 5270 1.153628 CGCCGGCAACTAGCTAGTT 60.154 57.895 29.48 29.48 46.76 2.24
1561 5309 3.020665 CGTACGCGTATGTCCGGC 61.021 66.667 26.58 10.10 0.00 6.13
1580 5331 2.027625 CGTGTTCCCCTCGCTGTTC 61.028 63.158 0.00 0.00 0.00 3.18
1612 5363 1.623311 CATGACCCACACAGTAGTCCA 59.377 52.381 0.00 0.00 0.00 4.02
1694 9449 2.513666 TGCCGTGCCGATCAATCC 60.514 61.111 0.00 0.00 0.00 3.01
1701 9456 2.083774 GTGCCGATCAATCCAAAGTGA 58.916 47.619 0.00 0.00 33.39 3.41
1715 9470 4.046462 CCAAAGTGACAAGTGCAAGATTG 58.954 43.478 6.12 6.12 0.00 2.67
1753 9508 6.271396 TGATTTGATTTGCACGAACAAAAG 57.729 33.333 10.67 0.00 42.45 2.27
1757 9512 4.297510 TGATTTGCACGAACAAAAGGATG 58.702 39.130 10.67 0.00 42.45 3.51
1777 9532 1.997606 GTTCTACCGCACCACACATAC 59.002 52.381 0.00 0.00 0.00 2.39
1778 9533 1.552578 TCTACCGCACCACACATACT 58.447 50.000 0.00 0.00 0.00 2.12
1779 9534 1.897133 TCTACCGCACCACACATACTT 59.103 47.619 0.00 0.00 0.00 2.24
1780 9535 2.300723 TCTACCGCACCACACATACTTT 59.699 45.455 0.00 0.00 0.00 2.66
1783 9538 2.292292 ACCGCACCACACATACTTTTTC 59.708 45.455 0.00 0.00 0.00 2.29
1819 9574 0.578683 CCGATGCAGACGCTAACATG 59.421 55.000 10.00 0.00 39.64 3.21
1896 9651 3.073735 AGAGACGGAGCTGGCAGG 61.074 66.667 17.64 1.38 0.00 4.85
1910 9665 4.516698 AGCTGGCAGGTCATAAAATTATCG 59.483 41.667 14.51 0.00 0.00 2.92
1913 9668 5.924356 TGGCAGGTCATAAAATTATCGAGA 58.076 37.500 0.00 0.00 0.00 4.04
1966 9729 7.015389 AGCTCACTACCTTTAAAGAGTAACACT 59.985 37.037 16.98 6.15 0.00 3.55
1967 9730 8.302438 GCTCACTACCTTTAAAGAGTAACACTA 58.698 37.037 16.98 0.00 0.00 2.74
1968 9731 9.843334 CTCACTACCTTTAAAGAGTAACACTAG 57.157 37.037 16.98 8.16 0.00 2.57
1969 9732 9.578576 TCACTACCTTTAAAGAGTAACACTAGA 57.421 33.333 16.98 2.66 0.00 2.43
1980 9743 7.317722 AGAGTAACACTAGAAACCCAAGATT 57.682 36.000 0.00 0.00 0.00 2.40
1982 9745 8.312564 AGAGTAACACTAGAAACCCAAGATTAC 58.687 37.037 0.00 0.00 0.00 1.89
1992 9755 6.490381 AGAAACCCAAGATTACTCCAGAAAAC 59.510 38.462 0.00 0.00 0.00 2.43
1995 9758 3.751175 CCAAGATTACTCCAGAAAACGCA 59.249 43.478 0.00 0.00 0.00 5.24
1997 9760 5.147162 CAAGATTACTCCAGAAAACGCAAC 58.853 41.667 0.00 0.00 0.00 4.17
2016 9779 2.114670 CACCCGTGCCAAGCCTATG 61.115 63.158 0.00 0.00 0.00 2.23
2031 9794 2.617021 GCCTATGAACTGGAACCCGAAA 60.617 50.000 0.00 0.00 0.00 3.46
2087 9850 1.739466 GCTATGCTTAGCTTGCACACA 59.261 47.619 21.12 4.71 46.13 3.72
2099 9862 9.098355 CTTAGCTTGCACACATACTTAATTCTA 57.902 33.333 0.00 0.00 0.00 2.10
2101 9864 6.316390 AGCTTGCACACATACTTAATTCTACC 59.684 38.462 0.00 0.00 0.00 3.18
2116 9879 1.376609 CTACCCGCCATTGTGCCTTC 61.377 60.000 0.00 0.00 0.00 3.46
2140 9904 1.248785 TTGCGCTTCTCTACGGGTCT 61.249 55.000 9.73 0.00 0.00 3.85
2215 12111 4.707105 CACCAGTACCAGATATGCATTCA 58.293 43.478 3.54 0.00 0.00 2.57
2218 12114 5.163163 ACCAGTACCAGATATGCATTCATGT 60.163 40.000 3.54 6.54 34.22 3.21
2221 12117 7.136772 CAGTACCAGATATGCATTCATGTTTG 58.863 38.462 3.54 0.00 34.22 2.93
2230 12126 2.098934 GCATTCATGTTTGCCGGACATA 59.901 45.455 5.05 0.00 36.04 2.29
2231 12127 3.793129 GCATTCATGTTTGCCGGACATAG 60.793 47.826 5.05 1.97 36.04 2.23
2232 12128 3.342377 TTCATGTTTGCCGGACATAGA 57.658 42.857 5.05 4.37 36.04 1.98
2233 12129 2.905075 TCATGTTTGCCGGACATAGAG 58.095 47.619 5.05 0.00 36.04 2.43
2234 12130 1.942657 CATGTTTGCCGGACATAGAGG 59.057 52.381 5.05 0.00 36.04 3.69
2237 12133 1.065709 GTTTGCCGGACATAGAGGGAA 60.066 52.381 5.05 0.00 33.55 3.97
2238 12134 0.830648 TTGCCGGACATAGAGGGAAG 59.169 55.000 5.05 0.00 31.72 3.46
2239 12135 0.325296 TGCCGGACATAGAGGGAAGT 60.325 55.000 5.05 0.00 0.00 3.01
2240 12136 0.389757 GCCGGACATAGAGGGAAGTC 59.610 60.000 5.05 0.00 0.00 3.01
2241 12137 2.030045 GCCGGACATAGAGGGAAGTCT 61.030 57.143 5.05 0.00 0.00 3.24
2242 12138 1.957877 CCGGACATAGAGGGAAGTCTC 59.042 57.143 0.00 0.00 0.00 3.36
2243 12139 1.604755 CGGACATAGAGGGAAGTCTCG 59.395 57.143 0.00 0.00 38.71 4.04
2244 12140 1.957877 GGACATAGAGGGAAGTCTCGG 59.042 57.143 0.00 0.00 38.71 4.63
2245 12141 1.957877 GACATAGAGGGAAGTCTCGGG 59.042 57.143 0.00 0.00 38.71 5.14
2246 12142 0.676736 CATAGAGGGAAGTCTCGGGC 59.323 60.000 0.00 0.00 38.71 6.13
2247 12143 0.558712 ATAGAGGGAAGTCTCGGGCT 59.441 55.000 0.00 0.00 38.71 5.19
2248 12144 0.106619 TAGAGGGAAGTCTCGGGCTC 60.107 60.000 0.00 0.00 38.71 4.70
2249 12145 1.682684 GAGGGAAGTCTCGGGCTCA 60.683 63.158 0.00 0.00 0.00 4.26
2251 12147 0.836400 AGGGAAGTCTCGGGCTCAAA 60.836 55.000 0.00 0.00 0.00 2.69
2253 12149 1.340114 GGGAAGTCTCGGGCTCAAAAT 60.340 52.381 0.00 0.00 0.00 1.82
2254 12150 1.740025 GGAAGTCTCGGGCTCAAAATG 59.260 52.381 0.00 0.00 0.00 2.32
2255 12151 2.615493 GGAAGTCTCGGGCTCAAAATGA 60.615 50.000 0.00 0.00 0.00 2.57
2256 12152 2.393271 AGTCTCGGGCTCAAAATGAG 57.607 50.000 3.00 3.00 46.90 2.90
2257 12153 1.065854 AGTCTCGGGCTCAAAATGAGG 60.066 52.381 9.25 0.00 44.43 3.86
2258 12154 1.066143 GTCTCGGGCTCAAAATGAGGA 60.066 52.381 9.25 0.00 44.43 3.71
2259 12155 1.208052 TCTCGGGCTCAAAATGAGGAG 59.792 52.381 9.25 7.42 44.43 3.69
2260 12156 0.253044 TCGGGCTCAAAATGAGGAGG 59.747 55.000 9.25 0.00 44.43 4.30
2261 12157 0.253044 CGGGCTCAAAATGAGGAGGA 59.747 55.000 9.25 0.00 44.43 3.71
2262 12158 1.745141 CGGGCTCAAAATGAGGAGGAG 60.745 57.143 9.25 0.00 44.43 3.69
2263 12159 1.409381 GGGCTCAAAATGAGGAGGAGG 60.409 57.143 9.25 0.00 44.43 4.30
2264 12160 1.561542 GGCTCAAAATGAGGAGGAGGA 59.438 52.381 9.25 0.00 44.43 3.71
2265 12161 2.637947 GCTCAAAATGAGGAGGAGGAC 58.362 52.381 9.25 0.00 44.43 3.85
2266 12162 2.026822 GCTCAAAATGAGGAGGAGGACA 60.027 50.000 9.25 0.00 44.43 4.02
2267 12163 3.871485 CTCAAAATGAGGAGGAGGACAG 58.129 50.000 0.00 0.00 40.71 3.51
2268 12164 2.026822 TCAAAATGAGGAGGAGGACAGC 60.027 50.000 0.00 0.00 0.00 4.40
2269 12165 1.661463 AAATGAGGAGGAGGACAGCA 58.339 50.000 0.00 0.00 0.00 4.41
2270 12166 1.202330 AATGAGGAGGAGGACAGCAG 58.798 55.000 0.00 0.00 0.00 4.24
2271 12167 0.337773 ATGAGGAGGAGGACAGCAGA 59.662 55.000 0.00 0.00 0.00 4.26
2307 12203 3.135348 TGGCCTTAGGATCTTGTCTCATG 59.865 47.826 3.32 0.00 0.00 3.07
2308 12204 3.389329 GGCCTTAGGATCTTGTCTCATGA 59.611 47.826 0.69 0.00 0.00 3.07
2309 12205 4.376146 GCCTTAGGATCTTGTCTCATGAC 58.624 47.826 0.69 0.00 43.20 3.06
2324 12220 7.137490 GTCTCATGACATGTTTTCATTCTCA 57.863 36.000 14.98 0.00 42.48 3.27
2325 12221 7.587629 GTCTCATGACATGTTTTCATTCTCAA 58.412 34.615 14.98 0.00 42.48 3.02
2326 12222 8.242053 GTCTCATGACATGTTTTCATTCTCAAT 58.758 33.333 14.98 0.00 42.48 2.57
2327 12223 8.456471 TCTCATGACATGTTTTCATTCTCAATC 58.544 33.333 14.98 0.00 38.64 2.67
2328 12224 8.344446 TCATGACATGTTTTCATTCTCAATCT 57.656 30.769 14.98 0.00 38.64 2.40
2329 12225 9.452287 TCATGACATGTTTTCATTCTCAATCTA 57.548 29.630 14.98 0.00 38.64 1.98
2330 12226 9.717892 CATGACATGTTTTCATTCTCAATCTAG 57.282 33.333 7.31 0.00 38.64 2.43
2331 12227 8.272545 TGACATGTTTTCATTCTCAATCTAGG 57.727 34.615 0.00 0.00 38.64 3.02
2332 12228 8.102676 TGACATGTTTTCATTCTCAATCTAGGA 58.897 33.333 0.00 0.00 38.64 2.94
2333 12229 8.273780 ACATGTTTTCATTCTCAATCTAGGAC 57.726 34.615 0.00 0.00 38.64 3.85
2334 12230 8.105829 ACATGTTTTCATTCTCAATCTAGGACT 58.894 33.333 0.00 0.00 38.64 3.85
2335 12231 7.912056 TGTTTTCATTCTCAATCTAGGACTG 57.088 36.000 0.00 0.00 0.00 3.51
2336 12232 6.881065 TGTTTTCATTCTCAATCTAGGACTGG 59.119 38.462 0.00 0.00 0.00 4.00
2337 12233 4.679373 TCATTCTCAATCTAGGACTGGC 57.321 45.455 0.00 0.00 0.00 4.85
2338 12234 4.033009 TCATTCTCAATCTAGGACTGGCA 58.967 43.478 0.00 0.00 0.00 4.92
2339 12235 4.100653 TCATTCTCAATCTAGGACTGGCAG 59.899 45.833 14.16 14.16 0.00 4.85
2340 12236 3.107402 TCTCAATCTAGGACTGGCAGT 57.893 47.619 22.26 22.26 0.00 4.40
2341 12237 3.027412 TCTCAATCTAGGACTGGCAGTC 58.973 50.000 34.21 34.21 44.32 3.51
2342 12238 3.030291 CTCAATCTAGGACTGGCAGTCT 58.970 50.000 38.04 27.81 44.46 3.24
2343 12239 4.079730 TCTCAATCTAGGACTGGCAGTCTA 60.080 45.833 38.04 27.51 44.46 2.59
2344 12240 3.954904 TCAATCTAGGACTGGCAGTCTAC 59.045 47.826 38.04 26.22 44.46 2.59
2345 12241 2.039818 TCTAGGACTGGCAGTCTACG 57.960 55.000 38.04 27.15 44.46 3.51
2346 12242 1.558294 TCTAGGACTGGCAGTCTACGA 59.442 52.381 38.04 28.55 44.46 3.43
2347 12243 2.026542 TCTAGGACTGGCAGTCTACGAA 60.027 50.000 38.04 21.66 44.46 3.85
2348 12244 1.629043 AGGACTGGCAGTCTACGAAA 58.371 50.000 38.04 0.00 44.46 3.46
2349 12245 1.272769 AGGACTGGCAGTCTACGAAAC 59.727 52.381 38.04 23.69 44.46 2.78
2350 12246 1.000506 GGACTGGCAGTCTACGAAACA 59.999 52.381 38.04 0.00 44.46 2.83
2351 12247 2.547218 GGACTGGCAGTCTACGAAACAA 60.547 50.000 38.04 0.00 44.46 2.83
2352 12248 2.475487 GACTGGCAGTCTACGAAACAAC 59.525 50.000 34.49 9.36 41.88 3.32
2353 12249 2.159014 ACTGGCAGTCTACGAAACAACA 60.159 45.455 15.88 0.00 0.00 3.33
2354 12250 3.067106 CTGGCAGTCTACGAAACAACAT 58.933 45.455 6.28 0.00 0.00 2.71
2355 12251 4.242475 CTGGCAGTCTACGAAACAACATA 58.758 43.478 6.28 0.00 0.00 2.29
2356 12252 4.827692 TGGCAGTCTACGAAACAACATAT 58.172 39.130 0.00 0.00 0.00 1.78
2357 12253 4.629634 TGGCAGTCTACGAAACAACATATG 59.370 41.667 0.00 0.00 0.00 1.78
2358 12254 4.494199 GGCAGTCTACGAAACAACATATGC 60.494 45.833 1.58 0.00 0.00 3.14
2359 12255 4.330074 GCAGTCTACGAAACAACATATGCT 59.670 41.667 1.58 0.00 0.00 3.79
2360 12256 5.725042 GCAGTCTACGAAACAACATATGCTG 60.725 44.000 1.58 3.22 0.00 4.41
2361 12257 5.576774 CAGTCTACGAAACAACATATGCTGA 59.423 40.000 12.98 0.00 0.00 4.26
2362 12258 6.090763 CAGTCTACGAAACAACATATGCTGAA 59.909 38.462 12.98 0.00 0.00 3.02
2363 12259 6.311445 AGTCTACGAAACAACATATGCTGAAG 59.689 38.462 12.98 3.87 0.00 3.02
2364 12260 6.310467 GTCTACGAAACAACATATGCTGAAGA 59.690 38.462 12.98 3.47 0.00 2.87
2365 12261 5.536554 ACGAAACAACATATGCTGAAGAG 57.463 39.130 12.98 4.49 0.00 2.85
2366 12262 5.237815 ACGAAACAACATATGCTGAAGAGA 58.762 37.500 12.98 0.00 0.00 3.10
2367 12263 5.349817 ACGAAACAACATATGCTGAAGAGAG 59.650 40.000 12.98 2.35 0.00 3.20
2368 12264 5.220548 CGAAACAACATATGCTGAAGAGAGG 60.221 44.000 12.98 0.00 0.00 3.69
2369 12265 5.426689 AACAACATATGCTGAAGAGAGGA 57.573 39.130 12.98 0.00 0.00 3.71
2370 12266 4.764172 ACAACATATGCTGAAGAGAGGAC 58.236 43.478 12.98 0.00 0.00 3.85
2371 12267 4.223700 ACAACATATGCTGAAGAGAGGACA 59.776 41.667 12.98 0.00 0.00 4.02
2372 12268 5.104610 ACAACATATGCTGAAGAGAGGACAT 60.105 40.000 12.98 0.00 0.00 3.06
2373 12269 5.212532 ACATATGCTGAAGAGAGGACATC 57.787 43.478 1.58 0.00 0.00 3.06
2374 12270 4.652881 ACATATGCTGAAGAGAGGACATCA 59.347 41.667 1.58 0.00 0.00 3.07
2375 12271 5.307456 ACATATGCTGAAGAGAGGACATCAT 59.693 40.000 1.58 0.00 0.00 2.45
2376 12272 3.538634 TGCTGAAGAGAGGACATCATG 57.461 47.619 0.00 0.00 0.00 3.07
2377 12273 3.102204 TGCTGAAGAGAGGACATCATGA 58.898 45.455 0.00 0.00 0.00 3.07
2378 12274 3.710165 TGCTGAAGAGAGGACATCATGAT 59.290 43.478 1.18 1.18 0.00 2.45
2379 12275 4.163649 TGCTGAAGAGAGGACATCATGATT 59.836 41.667 5.16 0.00 0.00 2.57
2380 12276 4.512198 GCTGAAGAGAGGACATCATGATTG 59.488 45.833 5.16 4.61 0.00 2.67
2381 12277 5.672503 CTGAAGAGAGGACATCATGATTGT 58.327 41.667 5.16 7.92 0.00 2.71
2382 12278 5.425630 TGAAGAGAGGACATCATGATTGTG 58.574 41.667 5.16 0.00 0.00 3.33
2383 12279 4.418973 AGAGAGGACATCATGATTGTGG 57.581 45.455 5.16 0.00 0.00 4.17
2384 12280 4.035814 AGAGAGGACATCATGATTGTGGA 58.964 43.478 5.16 0.00 0.00 4.02
2385 12281 4.659368 AGAGAGGACATCATGATTGTGGAT 59.341 41.667 5.16 0.00 0.00 3.41
2386 12282 4.715713 AGAGGACATCATGATTGTGGATG 58.284 43.478 5.16 0.00 43.08 3.51
2387 12283 4.411212 AGAGGACATCATGATTGTGGATGA 59.589 41.667 5.16 0.00 40.61 2.92
2388 12284 5.073280 AGAGGACATCATGATTGTGGATGAT 59.927 40.000 5.16 0.00 40.61 2.45
2389 12285 6.271624 AGAGGACATCATGATTGTGGATGATA 59.728 38.462 5.16 0.00 40.61 2.15
2390 12286 7.029053 AGGACATCATGATTGTGGATGATAT 57.971 36.000 5.16 0.00 40.61 1.63
2391 12287 7.110810 AGGACATCATGATTGTGGATGATATC 58.889 38.462 5.16 0.00 40.61 1.63
2392 12288 7.037514 AGGACATCATGATTGTGGATGATATCT 60.038 37.037 5.16 0.00 40.61 1.98
2393 12289 7.280428 GGACATCATGATTGTGGATGATATCTC 59.720 40.741 5.16 0.00 40.61 2.75
2394 12290 7.919151 ACATCATGATTGTGGATGATATCTCT 58.081 34.615 5.16 0.00 40.61 3.10
2395 12291 8.383947 ACATCATGATTGTGGATGATATCTCTT 58.616 33.333 5.16 0.00 40.61 2.85
2396 12292 8.669243 CATCATGATTGTGGATGATATCTCTTG 58.331 37.037 5.16 0.06 40.61 3.02
2397 12293 7.742767 TCATGATTGTGGATGATATCTCTTGT 58.257 34.615 3.98 0.00 0.00 3.16
2398 12294 7.660208 TCATGATTGTGGATGATATCTCTTGTG 59.340 37.037 3.98 0.00 0.00 3.33
2399 12295 6.892485 TGATTGTGGATGATATCTCTTGTGT 58.108 36.000 3.98 0.00 0.00 3.72
2400 12296 7.341030 TGATTGTGGATGATATCTCTTGTGTT 58.659 34.615 3.98 0.00 0.00 3.32
2401 12297 7.496920 TGATTGTGGATGATATCTCTTGTGTTC 59.503 37.037 3.98 0.00 0.00 3.18
2402 12298 6.550938 TGTGGATGATATCTCTTGTGTTCT 57.449 37.500 3.98 0.00 0.00 3.01
2403 12299 6.950842 TGTGGATGATATCTCTTGTGTTCTT 58.049 36.000 3.98 0.00 0.00 2.52
2404 12300 6.820152 TGTGGATGATATCTCTTGTGTTCTTG 59.180 38.462 3.98 0.00 0.00 3.02
2405 12301 6.820656 GTGGATGATATCTCTTGTGTTCTTGT 59.179 38.462 3.98 0.00 0.00 3.16
2406 12302 7.010923 GTGGATGATATCTCTTGTGTTCTTGTC 59.989 40.741 3.98 0.00 0.00 3.18
2407 12303 7.044181 GGATGATATCTCTTGTGTTCTTGTCA 58.956 38.462 3.98 0.00 0.00 3.58
2408 12304 7.550551 GGATGATATCTCTTGTGTTCTTGTCAA 59.449 37.037 3.98 0.00 0.00 3.18
2409 12305 8.853077 ATGATATCTCTTGTGTTCTTGTCAAA 57.147 30.769 3.98 0.00 0.00 2.69
2410 12306 8.087982 TGATATCTCTTGTGTTCTTGTCAAAC 57.912 34.615 3.98 0.00 0.00 2.93
2411 12307 4.857871 TCTCTTGTGTTCTTGTCAAACG 57.142 40.909 0.00 0.00 0.00 3.60
2412 12308 3.621268 TCTCTTGTGTTCTTGTCAAACGG 59.379 43.478 0.00 0.00 0.00 4.44
2413 12309 2.096819 TCTTGTGTTCTTGTCAAACGGC 59.903 45.455 0.00 0.00 0.00 5.68
2414 12310 1.745232 TGTGTTCTTGTCAAACGGCT 58.255 45.000 0.00 0.00 0.00 5.52
2415 12311 1.668751 TGTGTTCTTGTCAAACGGCTC 59.331 47.619 0.00 0.00 0.00 4.70
2416 12312 1.940613 GTGTTCTTGTCAAACGGCTCT 59.059 47.619 0.00 0.00 0.00 4.09
2417 12313 1.939934 TGTTCTTGTCAAACGGCTCTG 59.060 47.619 0.00 0.00 0.00 3.35
2418 12314 2.210116 GTTCTTGTCAAACGGCTCTGA 58.790 47.619 0.00 0.00 0.00 3.27
2419 12315 2.154854 TCTTGTCAAACGGCTCTGAG 57.845 50.000 0.00 0.00 0.00 3.35
2420 12316 1.151668 CTTGTCAAACGGCTCTGAGG 58.848 55.000 6.83 0.00 0.00 3.86
2421 12317 0.468226 TTGTCAAACGGCTCTGAGGT 59.532 50.000 6.83 0.00 0.00 3.85
2422 12318 0.033504 TGTCAAACGGCTCTGAGGTC 59.966 55.000 6.83 0.00 0.00 3.85
2423 12319 0.033504 GTCAAACGGCTCTGAGGTCA 59.966 55.000 6.83 0.00 0.00 4.02
2424 12320 0.976641 TCAAACGGCTCTGAGGTCAT 59.023 50.000 6.83 0.00 0.00 3.06
2425 12321 1.066858 TCAAACGGCTCTGAGGTCATC 60.067 52.381 6.83 0.00 0.00 2.92
2426 12322 0.250513 AAACGGCTCTGAGGTCATCC 59.749 55.000 6.83 0.00 0.00 3.51
2428 12324 1.326213 ACGGCTCTGAGGTCATCCTG 61.326 60.000 6.83 0.00 45.24 3.86
2429 12325 1.326213 CGGCTCTGAGGTCATCCTGT 61.326 60.000 6.83 0.00 45.24 4.00
2430 12326 0.177604 GGCTCTGAGGTCATCCTGTG 59.822 60.000 6.83 0.00 45.24 3.66
2431 12327 0.177604 GCTCTGAGGTCATCCTGTGG 59.822 60.000 6.83 0.00 45.24 4.17
2432 12328 0.177604 CTCTGAGGTCATCCTGTGGC 59.822 60.000 0.00 0.00 45.24 5.01
2433 12329 0.545071 TCTGAGGTCATCCTGTGGCA 60.545 55.000 0.00 0.00 45.24 4.92
2434 12330 0.107800 CTGAGGTCATCCTGTGGCAG 60.108 60.000 0.00 0.00 45.24 4.85
2435 12331 1.451028 GAGGTCATCCTGTGGCAGC 60.451 63.158 0.00 0.00 45.24 5.25
2436 12332 2.439156 GGTCATCCTGTGGCAGCC 60.439 66.667 3.66 3.66 32.76 4.85
2437 12333 2.439156 GTCATCCTGTGGCAGCCC 60.439 66.667 9.64 0.29 30.99 5.19
2438 12334 2.934932 TCATCCTGTGGCAGCCCA 60.935 61.111 9.64 5.67 39.32 5.36
2439 12335 2.036098 CATCCTGTGGCAGCCCAA 59.964 61.111 9.64 0.00 44.33 4.12
2440 12336 2.036256 ATCCTGTGGCAGCCCAAC 59.964 61.111 9.64 1.22 44.33 3.77
2441 12337 2.844195 ATCCTGTGGCAGCCCAACA 61.844 57.895 9.64 6.71 44.33 3.33
2442 12338 2.370459 ATCCTGTGGCAGCCCAACAA 62.370 55.000 9.64 0.00 44.33 2.83
2443 12339 1.909781 CCTGTGGCAGCCCAACAAT 60.910 57.895 9.64 0.00 44.33 2.71
2444 12340 1.588082 CTGTGGCAGCCCAACAATC 59.412 57.895 9.64 0.00 44.33 2.67
2445 12341 0.896940 CTGTGGCAGCCCAACAATCT 60.897 55.000 9.64 0.00 44.33 2.40
2446 12342 0.403655 TGTGGCAGCCCAACAATCTA 59.596 50.000 9.64 0.00 44.33 1.98
2447 12343 1.098050 GTGGCAGCCCAACAATCTAG 58.902 55.000 9.64 0.00 44.33 2.43
2448 12344 0.991146 TGGCAGCCCAACAATCTAGA 59.009 50.000 9.64 0.00 38.46 2.43
2449 12345 1.340017 TGGCAGCCCAACAATCTAGAC 60.340 52.381 9.64 0.00 38.46 2.59
2450 12346 1.383523 GCAGCCCAACAATCTAGACC 58.616 55.000 0.00 0.00 0.00 3.85
2451 12347 1.656652 CAGCCCAACAATCTAGACCG 58.343 55.000 0.00 0.00 0.00 4.79
2452 12348 0.541863 AGCCCAACAATCTAGACCGG 59.458 55.000 0.00 0.00 0.00 5.28
2453 12349 0.463833 GCCCAACAATCTAGACCGGG 60.464 60.000 6.32 1.93 35.18 5.73
2454 12350 1.200519 CCCAACAATCTAGACCGGGA 58.799 55.000 6.32 0.00 33.83 5.14
2455 12351 1.139058 CCCAACAATCTAGACCGGGAG 59.861 57.143 6.32 0.00 33.83 4.30
2471 12367 4.522722 CGGGAGGATTACAAGGATAGAC 57.477 50.000 0.00 0.00 0.00 2.59
2472 12368 3.895656 CGGGAGGATTACAAGGATAGACA 59.104 47.826 0.00 0.00 0.00 3.41
2473 12369 4.021894 CGGGAGGATTACAAGGATAGACAG 60.022 50.000 0.00 0.00 0.00 3.51
2474 12370 5.148502 GGGAGGATTACAAGGATAGACAGA 58.851 45.833 0.00 0.00 0.00 3.41
2475 12371 5.782845 GGGAGGATTACAAGGATAGACAGAT 59.217 44.000 0.00 0.00 0.00 2.90
2476 12372 6.295575 GGGAGGATTACAAGGATAGACAGATG 60.296 46.154 0.00 0.00 0.00 2.90
2477 12373 6.495181 GGAGGATTACAAGGATAGACAGATGA 59.505 42.308 0.00 0.00 0.00 2.92
2478 12374 7.180051 GGAGGATTACAAGGATAGACAGATGAT 59.820 40.741 0.00 0.00 0.00 2.45
2479 12375 7.905265 AGGATTACAAGGATAGACAGATGATG 58.095 38.462 0.00 0.00 0.00 3.07
2480 12376 7.038445 AGGATTACAAGGATAGACAGATGATGG 60.038 40.741 0.00 0.00 0.00 3.51
2481 12377 4.970860 ACAAGGATAGACAGATGATGGG 57.029 45.455 0.00 0.00 0.00 4.00
2482 12378 4.560739 ACAAGGATAGACAGATGATGGGA 58.439 43.478 0.00 0.00 0.00 4.37
2483 12379 4.592351 ACAAGGATAGACAGATGATGGGAG 59.408 45.833 0.00 0.00 0.00 4.30
2484 12380 3.788933 AGGATAGACAGATGATGGGAGG 58.211 50.000 0.00 0.00 0.00 4.30
2485 12381 2.235898 GGATAGACAGATGATGGGAGGC 59.764 54.545 0.00 0.00 0.00 4.70
2486 12382 1.722034 TAGACAGATGATGGGAGGCC 58.278 55.000 0.00 0.00 0.00 5.19
2487 12383 0.326904 AGACAGATGATGGGAGGCCA 60.327 55.000 5.01 0.00 0.00 5.36
2488 12384 0.548031 GACAGATGATGGGAGGCCAA 59.452 55.000 5.01 0.00 0.00 4.52
2489 12385 1.002069 ACAGATGATGGGAGGCCAAA 58.998 50.000 5.01 0.00 0.00 3.28
2490 12386 1.358787 ACAGATGATGGGAGGCCAAAA 59.641 47.619 5.01 0.00 0.00 2.44
2491 12387 2.023695 ACAGATGATGGGAGGCCAAAAT 60.024 45.455 5.01 0.00 0.00 1.82
2492 12388 2.364324 CAGATGATGGGAGGCCAAAATG 59.636 50.000 5.01 0.00 0.00 2.32
2493 12389 1.069668 GATGATGGGAGGCCAAAATGC 59.930 52.381 5.01 0.00 0.00 3.56
2494 12390 0.041535 TGATGGGAGGCCAAAATGCT 59.958 50.000 5.01 0.00 0.00 3.79
2495 12391 1.287442 TGATGGGAGGCCAAAATGCTA 59.713 47.619 5.01 0.00 0.00 3.49
2496 12392 1.683385 GATGGGAGGCCAAAATGCTAC 59.317 52.381 5.01 0.00 0.00 3.58
2497 12393 0.407528 TGGGAGGCCAAAATGCTACA 59.592 50.000 5.01 0.00 0.00 2.74
2498 12394 1.006998 TGGGAGGCCAAAATGCTACAT 59.993 47.619 5.01 0.00 0.00 2.29
2499 12395 2.110578 GGGAGGCCAAAATGCTACATT 58.889 47.619 5.01 0.00 0.00 2.71
2500 12396 2.501316 GGGAGGCCAAAATGCTACATTT 59.499 45.455 5.01 0.00 0.00 2.32
2501 12397 3.704061 GGGAGGCCAAAATGCTACATTTA 59.296 43.478 5.01 0.00 0.00 1.40
2502 12398 4.441495 GGGAGGCCAAAATGCTACATTTAC 60.441 45.833 5.01 0.43 0.00 2.01
2503 12399 4.441495 GGAGGCCAAAATGCTACATTTACC 60.441 45.833 5.01 8.26 0.00 2.85
2504 12400 3.130340 AGGCCAAAATGCTACATTTACCG 59.870 43.478 5.01 0.00 0.00 4.02
2505 12401 3.129638 GGCCAAAATGCTACATTTACCGA 59.870 43.478 0.00 0.00 0.00 4.69
2506 12402 4.381079 GGCCAAAATGCTACATTTACCGAA 60.381 41.667 0.00 0.00 0.00 4.30
2507 12403 4.798387 GCCAAAATGCTACATTTACCGAAG 59.202 41.667 6.01 0.00 0.00 3.79
2508 12404 4.798387 CCAAAATGCTACATTTACCGAAGC 59.202 41.667 6.01 0.00 0.00 3.86
2509 12405 5.393027 CCAAAATGCTACATTTACCGAAGCT 60.393 40.000 6.01 0.00 34.28 3.74
2510 12406 5.897377 AAATGCTACATTTACCGAAGCTT 57.103 34.783 0.00 0.00 34.28 3.74
2511 12407 5.897377 AATGCTACATTTACCGAAGCTTT 57.103 34.783 0.00 0.00 34.28 3.51
2512 12408 6.995511 AATGCTACATTTACCGAAGCTTTA 57.004 33.333 0.00 0.00 34.28 1.85
2513 12409 7.568199 AATGCTACATTTACCGAAGCTTTAT 57.432 32.000 0.00 0.00 34.28 1.40
2514 12410 8.671384 AATGCTACATTTACCGAAGCTTTATA 57.329 30.769 0.00 0.00 34.28 0.98
2515 12411 8.848474 ATGCTACATTTACCGAAGCTTTATAT 57.152 30.769 0.00 0.00 34.28 0.86
2516 12412 8.083462 TGCTACATTTACCGAAGCTTTATATG 57.917 34.615 0.00 3.21 34.28 1.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.335661 GGCACAAGGTAGGTCAAACTATTTG 60.336 44.000 0.00 0.00 41.96 2.32
1 2 4.765339 GGCACAAGGTAGGTCAAACTATTT 59.235 41.667 0.00 0.00 0.00 1.40
2 3 4.202524 TGGCACAAGGTAGGTCAAACTATT 60.203 41.667 0.00 0.00 31.92 1.73
3 4 3.329520 TGGCACAAGGTAGGTCAAACTAT 59.670 43.478 0.00 0.00 31.92 2.12
4 5 2.706723 TGGCACAAGGTAGGTCAAACTA 59.293 45.455 0.00 0.00 31.92 2.24
5 6 1.493022 TGGCACAAGGTAGGTCAAACT 59.507 47.619 0.00 0.00 31.92 2.66
6 7 1.975660 TGGCACAAGGTAGGTCAAAC 58.024 50.000 0.00 0.00 31.92 2.93
19 20 3.696051 GCTGAGATTATCCTTTTGGCACA 59.304 43.478 0.00 0.00 40.12 4.57
20 21 3.242870 CGCTGAGATTATCCTTTTGGCAC 60.243 47.826 0.00 0.00 40.12 5.01
21 22 2.945008 CGCTGAGATTATCCTTTTGGCA 59.055 45.455 0.00 0.00 40.12 4.92
22 23 3.206150 TCGCTGAGATTATCCTTTTGGC 58.794 45.455 0.00 0.00 40.12 4.52
23 24 4.260948 GCTTCGCTGAGATTATCCTTTTGG 60.261 45.833 0.00 0.00 42.21 3.28
24 25 4.574013 AGCTTCGCTGAGATTATCCTTTTG 59.426 41.667 0.00 0.00 37.57 2.44
25 26 4.775236 AGCTTCGCTGAGATTATCCTTTT 58.225 39.130 0.00 0.00 37.57 2.27
26 27 4.414337 AGCTTCGCTGAGATTATCCTTT 57.586 40.909 0.00 0.00 37.57 3.11
50 51 1.430632 GTGATGGACATGCGGCAAG 59.569 57.895 6.82 4.89 0.00 4.01
55 56 1.229428 GTATGGGTGATGGACATGCG 58.771 55.000 0.00 0.00 0.00 4.73
56 57 1.229428 CGTATGGGTGATGGACATGC 58.771 55.000 0.00 0.00 0.00 4.06
75 76 3.889196 TTGTACTCGGCAAAATGTGAC 57.111 42.857 0.00 0.00 0.00 3.67
99 100 2.534298 CAAGGTGTGCTGAGATACTCG 58.466 52.381 0.00 0.00 32.35 4.18
102 103 2.770164 ACCAAGGTGTGCTGAGATAC 57.230 50.000 0.00 0.00 0.00 2.24
116 117 5.009010 CCAATGATATTTCCCGAGAACCAAG 59.991 44.000 0.00 0.00 0.00 3.61
119 120 4.461198 ACCAATGATATTTCCCGAGAACC 58.539 43.478 0.00 0.00 0.00 3.62
128 129 5.351465 ACTGTCACGTGACCAATGATATTTC 59.649 40.000 38.12 15.21 44.15 2.17
135 136 0.784178 CGACTGTCACGTGACCAATG 59.216 55.000 38.12 27.65 44.15 2.82
136 137 0.387929 ACGACTGTCACGTGACCAAT 59.612 50.000 38.12 26.17 44.15 3.16
145 146 0.956633 TCCCTACACACGACTGTCAC 59.043 55.000 8.73 0.00 0.00 3.67
155 156 5.670792 AATACTCGACAAATCCCTACACA 57.329 39.130 0.00 0.00 0.00 3.72
156 157 6.370718 ACAAAATACTCGACAAATCCCTACAC 59.629 38.462 0.00 0.00 0.00 2.90
157 158 6.469410 ACAAAATACTCGACAAATCCCTACA 58.531 36.000 0.00 0.00 0.00 2.74
160 161 6.488683 TGAAACAAAATACTCGACAAATCCCT 59.511 34.615 0.00 0.00 0.00 4.20
161 162 6.674066 TGAAACAAAATACTCGACAAATCCC 58.326 36.000 0.00 0.00 0.00 3.85
163 164 8.728088 ACATGAAACAAAATACTCGACAAATC 57.272 30.769 0.00 0.00 0.00 2.17
164 165 8.567948 AGACATGAAACAAAATACTCGACAAAT 58.432 29.630 0.00 0.00 0.00 2.32
166 167 7.490962 AGACATGAAACAAAATACTCGACAA 57.509 32.000 0.00 0.00 0.00 3.18
168 169 6.234213 CGAGACATGAAACAAAATACTCGAC 58.766 40.000 0.00 0.00 44.41 4.20
169 170 5.347635 CCGAGACATGAAACAAAATACTCGA 59.652 40.000 0.00 0.00 44.41 4.04
170 171 5.550981 CCGAGACATGAAACAAAATACTCG 58.449 41.667 0.00 0.00 42.38 4.18
186 192 1.136774 CGTCATCTTCGCCGAGACA 59.863 57.895 5.29 0.00 0.00 3.41
204 210 0.165944 CGTCCAACATTCGCCAAGAC 59.834 55.000 0.00 0.00 0.00 3.01
235 241 0.171231 GAATTTGAACGCCCAGGAGC 59.829 55.000 0.00 0.00 0.00 4.70
244 250 1.463528 GGAACTCGGCGAATTTGAACG 60.464 52.381 12.13 0.00 0.00 3.95
266 272 2.673368 GACTTTGCCGATAACCAGACAG 59.327 50.000 0.00 0.00 0.00 3.51
312 318 1.612442 ACTTGAAGGGCTAGCCGGA 60.612 57.895 27.24 8.07 36.85 5.14
313 319 1.450312 CACTTGAAGGGCTAGCCGG 60.450 63.158 27.24 14.21 36.85 6.13
314 320 2.109126 GCACTTGAAGGGCTAGCCG 61.109 63.158 27.24 14.67 42.59 5.52
315 321 3.911137 GCACTTGAAGGGCTAGCC 58.089 61.111 26.55 26.55 42.59 3.93
344 350 1.063764 GAGCCTTACGTGGAGTACTCG 59.936 57.143 16.56 8.76 34.56 4.18
351 357 0.038892 GTTGTCGAGCCTTACGTGGA 60.039 55.000 0.00 0.00 0.00 4.02
356 362 2.165319 AACCAGTTGTCGAGCCTTAC 57.835 50.000 0.00 0.00 0.00 2.34
390 396 1.079875 TATTTTGTCGAGCGCCGTCC 61.080 55.000 16.00 9.81 39.75 4.79
428 1456 3.126528 CTAAGGGTACTCGGGCCG 58.873 66.667 22.51 22.51 0.00 6.13
429 1457 2.804912 GGCTAAGGGTACTCGGGCC 61.805 68.421 10.05 10.05 0.00 5.80
430 1458 1.619807 TTGGCTAAGGGTACTCGGGC 61.620 60.000 0.00 0.00 0.00 6.13
431 1459 0.464452 CTTGGCTAAGGGTACTCGGG 59.536 60.000 1.05 0.00 0.00 5.14
451 1479 4.188247 AGCGAGTTTGCTGATTGTAGTA 57.812 40.909 0.00 0.00 45.28 1.82
452 1480 3.045601 AGCGAGTTTGCTGATTGTAGT 57.954 42.857 0.00 0.00 45.28 2.73
463 1491 1.135315 CCATTCGGCAGCGAGTTTG 59.865 57.895 0.00 0.00 0.00 2.93
468 1496 2.435938 GTTCCCATTCGGCAGCGA 60.436 61.111 0.00 0.00 0.00 4.93
475 1503 0.168128 GTGAAAGCGGTTCCCATTCG 59.832 55.000 0.00 0.00 35.12 3.34
487 1515 4.016444 TGATAGGGACATTTGGTGAAAGC 58.984 43.478 0.00 0.00 0.00 3.51
502 1530 6.554334 TTTCGAGTTTTTCAAGTGATAGGG 57.446 37.500 0.00 0.00 0.00 3.53
506 1534 6.756074 TGCATTTTTCGAGTTTTTCAAGTGAT 59.244 30.769 0.00 0.00 0.00 3.06
507 1535 6.096036 TGCATTTTTCGAGTTTTTCAAGTGA 58.904 32.000 0.00 0.00 0.00 3.41
538 1566 1.880646 GCTAAAGCGGTTTCCCACTCA 60.881 52.381 17.03 0.00 0.00 3.41
551 1579 1.541588 CCAGGAACACTTGGCTAAAGC 59.458 52.381 0.00 0.00 39.76 3.51
556 1584 1.529244 GTGCCAGGAACACTTGGCT 60.529 57.895 20.37 0.00 41.25 4.75
557 1585 2.908073 CGTGCCAGGAACACTTGGC 61.908 63.158 14.75 14.75 41.14 4.52
558 1586 1.525995 ACGTGCCAGGAACACTTGG 60.526 57.895 0.00 0.00 35.84 3.61
568 1596 1.269206 ACTGCAATTTTCACGTGCCAG 60.269 47.619 11.67 10.04 37.48 4.85
569 1597 0.743688 ACTGCAATTTTCACGTGCCA 59.256 45.000 11.67 0.00 37.48 4.92
571 1599 2.973224 CACTACTGCAATTTTCACGTGC 59.027 45.455 11.67 0.00 38.78 5.34
575 1603 6.428385 AGATAGCACTACTGCAATTTTCAC 57.572 37.500 0.00 0.00 46.97 3.18
576 1604 6.255670 CGTAGATAGCACTACTGCAATTTTCA 59.744 38.462 11.73 0.00 46.97 2.69
594 1622 8.253810 ACAGTACAGTCAACTACTACGTAGATA 58.746 37.037 28.74 15.25 38.29 1.98
598 1626 5.991606 ACACAGTACAGTCAACTACTACGTA 59.008 40.000 0.00 0.00 35.76 3.57
599 1627 4.818546 ACACAGTACAGTCAACTACTACGT 59.181 41.667 0.00 0.00 35.76 3.57
600 1628 5.354054 ACACAGTACAGTCAACTACTACG 57.646 43.478 0.00 0.00 35.76 3.51
601 1629 7.063898 TCGATACACAGTACAGTCAACTACTAC 59.936 40.741 0.00 0.00 35.76 2.73
602 1630 7.099120 TCGATACACAGTACAGTCAACTACTA 58.901 38.462 0.00 0.00 35.76 1.82
603 1631 5.936372 TCGATACACAGTACAGTCAACTACT 59.064 40.000 0.00 0.00 39.81 2.57
604 1632 6.174451 TCGATACACAGTACAGTCAACTAC 57.826 41.667 0.00 0.00 0.00 2.73
686 1714 6.777213 TCTAGTAAATCAGTTGGAGACTCC 57.223 41.667 15.13 15.13 36.10 3.85
724 1752 7.095270 AGTTTTAACCCGATGGACGATATATC 58.905 38.462 2.34 2.34 45.77 1.63
725 1753 7.001099 AGTTTTAACCCGATGGACGATATAT 57.999 36.000 0.00 0.00 45.77 0.86
726 1754 6.040729 TGAGTTTTAACCCGATGGACGATATA 59.959 38.462 0.00 0.00 45.77 0.86
734 1857 5.699097 TCTTTTGAGTTTTAACCCGATGG 57.301 39.130 0.00 0.00 37.80 3.51
740 1863 7.273320 AGTAGGCTTCTTTTGAGTTTTAACC 57.727 36.000 0.00 0.00 0.00 2.85
752 1875 5.557866 ACCGTTGAATTAGTAGGCTTCTTT 58.442 37.500 0.00 0.00 0.00 2.52
766 1889 1.463674 GGGCTTGATGACCGTTGAAT 58.536 50.000 0.00 0.00 31.76 2.57
767 1890 2.941210 GGGCTTGATGACCGTTGAA 58.059 52.632 0.00 0.00 31.76 2.69
774 1897 3.005684 TGTTCATGTTTGGGCTTGATGAC 59.994 43.478 0.00 0.00 0.00 3.06
775 1898 3.229293 TGTTCATGTTTGGGCTTGATGA 58.771 40.909 0.00 0.00 0.00 2.92
779 1902 3.663995 TGATGTTCATGTTTGGGCTTG 57.336 42.857 0.00 0.00 0.00 4.01
780 1903 3.007182 CCTTGATGTTCATGTTTGGGCTT 59.993 43.478 0.00 0.00 0.00 4.35
781 1904 2.564062 CCTTGATGTTCATGTTTGGGCT 59.436 45.455 0.00 0.00 0.00 5.19
782 1905 2.354003 CCCTTGATGTTCATGTTTGGGC 60.354 50.000 0.00 0.00 0.00 5.36
783 1906 2.234414 CCCCTTGATGTTCATGTTTGGG 59.766 50.000 0.00 0.00 0.00 4.12
784 1907 2.899256 ACCCCTTGATGTTCATGTTTGG 59.101 45.455 0.00 0.00 0.00 3.28
786 1909 5.255397 TCTACCCCTTGATGTTCATGTTT 57.745 39.130 0.00 0.00 0.00 2.83
787 1910 4.927267 TCTACCCCTTGATGTTCATGTT 57.073 40.909 0.00 0.00 0.00 2.71
788 1911 4.927267 TTCTACCCCTTGATGTTCATGT 57.073 40.909 0.00 0.00 0.00 3.21
789 1912 6.708054 GTCTATTCTACCCCTTGATGTTCATG 59.292 42.308 0.00 0.00 0.00 3.07
794 1932 6.206042 AGAAGTCTATTCTACCCCTTGATGT 58.794 40.000 0.00 0.00 0.00 3.06
831 4517 3.098555 CCGTTTACCGCTGCATCC 58.901 61.111 0.00 0.00 34.38 3.51
832 4518 0.808453 TAGCCGTTTACCGCTGCATC 60.808 55.000 0.00 0.00 34.38 3.91
893 4618 1.917273 TCTGTTTATAGCACCGTCGC 58.083 50.000 0.00 0.00 0.00 5.19
913 4639 1.980772 GAAGCTTGTGGCAGGGCAT 60.981 57.895 2.10 0.00 44.79 4.40
914 4640 2.598394 GAAGCTTGTGGCAGGGCA 60.598 61.111 2.10 0.00 44.79 5.36
959 4685 9.657121 GTACAGATCAAATATTTGCTAGCTTTC 57.343 33.333 21.15 9.89 38.05 2.62
979 4705 3.914605 CTGCACAGCGCGGTACAGA 62.915 63.158 29.84 7.37 46.97 3.41
991 4717 0.035725 CTTCTCTCCATGGCTGCACA 60.036 55.000 6.96 0.00 0.00 4.57
1152 4878 5.085390 CAGTCGCTTGTATATCGATCTGAG 58.915 45.833 0.00 0.00 35.50 3.35
1168 4898 1.756430 TGCTCTCATACTCAGTCGCT 58.244 50.000 0.00 0.00 0.00 4.93
1169 4899 2.791383 ATGCTCTCATACTCAGTCGC 57.209 50.000 0.00 0.00 0.00 5.19
1197 4927 3.695830 ATGGATGGTGTGTACGAACTT 57.304 42.857 0.00 0.00 0.00 2.66
1208 4942 3.881688 GGTCAAGAGATCAATGGATGGTG 59.118 47.826 0.00 0.00 32.67 4.17
1233 4979 2.104111 TCACCACCAAGACCTGTACAAG 59.896 50.000 0.00 0.00 0.00 3.16
1235 4981 1.796017 TCACCACCAAGACCTGTACA 58.204 50.000 0.00 0.00 0.00 2.90
1267 5015 3.338250 TTCTTCATGGCCGCCCCT 61.338 61.111 7.03 0.00 0.00 4.79
1274 5022 0.537188 TCGAGGACCTTCTTCATGGC 59.463 55.000 0.00 0.00 0.00 4.40
1543 5291 3.020665 CCGGACATACGCGTACGC 61.021 66.667 29.83 29.83 42.08 4.42
1561 5309 3.530910 AACAGCGAGGGGAACACGG 62.531 63.158 0.00 0.00 33.51 4.94
1612 5363 8.812972 TGAAGTTGAACTGGTACATAGATACTT 58.187 33.333 0.00 0.00 38.20 2.24
1690 9445 3.953612 TCTTGCACTTGTCACTTTGGATT 59.046 39.130 0.00 0.00 0.00 3.01
1715 9470 6.833342 ATCAAATCAAAGTTCAACAACAGC 57.167 33.333 0.00 0.00 34.60 4.40
1753 9508 0.036765 TGTGGTGCGGTAGAACATCC 60.037 55.000 0.00 0.00 0.00 3.51
1757 9512 1.997606 GTATGTGTGGTGCGGTAGAAC 59.002 52.381 0.00 0.00 0.00 3.01
1780 9535 9.562583 GCATCGGTACAATGTTTATAAAAGAAA 57.437 29.630 0.00 0.00 0.00 2.52
1783 9538 8.394877 TCTGCATCGGTACAATGTTTATAAAAG 58.605 33.333 0.00 0.00 0.00 2.27
1795 9550 0.812549 TAGCGTCTGCATCGGTACAA 59.187 50.000 15.64 1.40 46.23 2.41
1796 9551 0.812549 TTAGCGTCTGCATCGGTACA 59.187 50.000 18.10 10.16 46.23 2.90
1801 9556 0.042708 GCATGTTAGCGTCTGCATCG 60.043 55.000 7.00 7.00 46.23 3.84
1819 9574 0.666913 GGATGAGCATGGATGTGTGC 59.333 55.000 0.00 0.00 41.57 4.57
1886 9641 5.334414 CGATAATTTTATGACCTGCCAGCTC 60.334 44.000 0.00 0.00 0.00 4.09
1890 9645 5.924356 TCTCGATAATTTTATGACCTGCCA 58.076 37.500 0.00 0.00 0.00 4.92
1896 9651 6.706055 TGGCGATCTCGATAATTTTATGAC 57.294 37.500 3.33 0.00 43.02 3.06
1910 9665 1.136197 CGAGACGTCTATGGCGATCTC 60.136 57.143 20.09 0.74 35.40 2.75
1913 9668 1.799403 CTACGAGACGTCTATGGCGAT 59.201 52.381 25.43 14.58 41.54 4.58
1966 9729 6.945636 TTCTGGAGTAATCTTGGGTTTCTA 57.054 37.500 0.00 0.00 0.00 2.10
1967 9730 5.843019 TTCTGGAGTAATCTTGGGTTTCT 57.157 39.130 0.00 0.00 0.00 2.52
1968 9731 6.567891 CGTTTTCTGGAGTAATCTTGGGTTTC 60.568 42.308 0.00 0.00 0.00 2.78
1969 9732 5.240844 CGTTTTCTGGAGTAATCTTGGGTTT 59.759 40.000 0.00 0.00 0.00 3.27
1970 9733 4.760204 CGTTTTCTGGAGTAATCTTGGGTT 59.240 41.667 0.00 0.00 0.00 4.11
1971 9734 4.324267 CGTTTTCTGGAGTAATCTTGGGT 58.676 43.478 0.00 0.00 0.00 4.51
1972 9735 3.127030 GCGTTTTCTGGAGTAATCTTGGG 59.873 47.826 0.00 0.00 0.00 4.12
1980 9743 2.215196 GTGGTTGCGTTTTCTGGAGTA 58.785 47.619 0.00 0.00 0.00 2.59
1982 9745 0.310854 GGTGGTTGCGTTTTCTGGAG 59.689 55.000 0.00 0.00 0.00 3.86
1997 9760 3.344137 ATAGGCTTGGCACGGGTGG 62.344 63.158 0.00 0.00 0.00 4.61
2016 9779 2.942641 CCCTTTCGGGTTCCAGTTC 58.057 57.895 0.00 0.00 46.12 3.01
2031 9794 0.763652 CATATGGTGAGAGCTGCCCT 59.236 55.000 0.00 0.00 0.00 5.19
2041 9804 2.770447 TGGCTAGGTTCCATATGGTGA 58.230 47.619 21.28 8.89 36.34 4.02
2087 9850 5.763204 CACAATGGCGGGTAGAATTAAGTAT 59.237 40.000 0.00 0.00 0.00 2.12
2116 9879 1.590238 CCGTAGAGAAGCGCAAGAATG 59.410 52.381 11.47 0.00 43.02 2.67
2140 9904 1.634757 GCCAACGTCGATGCATGTCA 61.635 55.000 2.46 0.00 0.00 3.58
2215 12111 1.134098 CCCTCTATGTCCGGCAAACAT 60.134 52.381 11.58 11.58 40.37 2.71
2218 12114 1.209504 CTTCCCTCTATGTCCGGCAAA 59.790 52.381 0.00 0.00 0.00 3.68
2221 12117 0.389757 GACTTCCCTCTATGTCCGGC 59.610 60.000 0.00 0.00 0.00 6.13
2230 12126 1.380650 GAGCCCGAGACTTCCCTCT 60.381 63.158 0.00 0.00 0.00 3.69
2231 12127 1.258445 TTGAGCCCGAGACTTCCCTC 61.258 60.000 0.00 0.00 0.00 4.30
2232 12128 0.836400 TTTGAGCCCGAGACTTCCCT 60.836 55.000 0.00 0.00 0.00 4.20
2233 12129 0.036306 TTTTGAGCCCGAGACTTCCC 59.964 55.000 0.00 0.00 0.00 3.97
2234 12130 1.740025 CATTTTGAGCCCGAGACTTCC 59.260 52.381 0.00 0.00 0.00 3.46
2237 12133 1.065854 CCTCATTTTGAGCCCGAGACT 60.066 52.381 0.00 0.00 42.98 3.24
2238 12134 1.066143 TCCTCATTTTGAGCCCGAGAC 60.066 52.381 0.00 0.00 42.98 3.36
2239 12135 1.208052 CTCCTCATTTTGAGCCCGAGA 59.792 52.381 0.00 0.00 42.98 4.04
2240 12136 1.661341 CTCCTCATTTTGAGCCCGAG 58.339 55.000 0.00 0.00 42.98 4.63
2241 12137 0.253044 CCTCCTCATTTTGAGCCCGA 59.747 55.000 0.00 0.00 42.98 5.14
2242 12138 0.253044 TCCTCCTCATTTTGAGCCCG 59.747 55.000 0.00 0.00 42.98 6.13
2243 12139 1.409381 CCTCCTCCTCATTTTGAGCCC 60.409 57.143 0.00 0.00 42.98 5.19
2244 12140 1.561542 TCCTCCTCCTCATTTTGAGCC 59.438 52.381 0.00 0.00 42.98 4.70
2245 12141 2.026822 TGTCCTCCTCCTCATTTTGAGC 60.027 50.000 0.00 0.00 42.98 4.26
2246 12142 3.871485 CTGTCCTCCTCCTCATTTTGAG 58.129 50.000 0.00 0.00 43.91 3.02
2247 12143 2.026822 GCTGTCCTCCTCCTCATTTTGA 60.027 50.000 0.00 0.00 0.00 2.69
2248 12144 2.290514 TGCTGTCCTCCTCCTCATTTTG 60.291 50.000 0.00 0.00 0.00 2.44
2249 12145 1.988107 TGCTGTCCTCCTCCTCATTTT 59.012 47.619 0.00 0.00 0.00 1.82
2251 12147 1.202330 CTGCTGTCCTCCTCCTCATT 58.798 55.000 0.00 0.00 0.00 2.57
2253 12149 0.115152 TTCTGCTGTCCTCCTCCTCA 59.885 55.000 0.00 0.00 0.00 3.86
2254 12150 1.138661 CATTCTGCTGTCCTCCTCCTC 59.861 57.143 0.00 0.00 0.00 3.71
2255 12151 1.202330 CATTCTGCTGTCCTCCTCCT 58.798 55.000 0.00 0.00 0.00 3.69
2256 12152 0.463474 GCATTCTGCTGTCCTCCTCC 60.463 60.000 0.00 0.00 40.96 4.30
2257 12153 0.251354 TGCATTCTGCTGTCCTCCTC 59.749 55.000 0.34 0.00 45.31 3.71
2258 12154 0.694771 TTGCATTCTGCTGTCCTCCT 59.305 50.000 0.34 0.00 45.31 3.69
2259 12155 1.404391 CATTGCATTCTGCTGTCCTCC 59.596 52.381 0.34 0.00 45.31 4.30
2260 12156 2.089980 ACATTGCATTCTGCTGTCCTC 58.910 47.619 0.34 0.00 45.31 3.71
2261 12157 2.089980 GACATTGCATTCTGCTGTCCT 58.910 47.619 9.24 0.00 45.31 3.85
2262 12158 2.089980 AGACATTGCATTCTGCTGTCC 58.910 47.619 14.30 2.41 44.63 4.02
2263 12159 3.844577 AAGACATTGCATTCTGCTGTC 57.155 42.857 11.45 11.45 44.18 3.51
2264 12160 4.304110 CAAAAGACATTGCATTCTGCTGT 58.696 39.130 0.34 0.00 45.31 4.40
2265 12161 3.678072 CCAAAAGACATTGCATTCTGCTG 59.322 43.478 0.34 0.00 45.31 4.41
2266 12162 3.863400 GCCAAAAGACATTGCATTCTGCT 60.863 43.478 0.34 0.00 45.31 4.24
2267 12163 2.414138 GCCAAAAGACATTGCATTCTGC 59.586 45.455 0.00 0.00 45.29 4.26
2268 12164 2.997986 GGCCAAAAGACATTGCATTCTG 59.002 45.455 0.00 0.00 0.00 3.02
2269 12165 2.901839 AGGCCAAAAGACATTGCATTCT 59.098 40.909 5.01 0.00 0.00 2.40
2270 12166 3.323751 AGGCCAAAAGACATTGCATTC 57.676 42.857 5.01 0.00 0.00 2.67
2271 12167 3.775261 AAGGCCAAAAGACATTGCATT 57.225 38.095 5.01 0.00 0.00 3.56
2307 12203 8.394121 GTCCTAGATTGAGAATGAAAACATGTC 58.606 37.037 0.00 0.00 0.00 3.06
2308 12204 8.105829 AGTCCTAGATTGAGAATGAAAACATGT 58.894 33.333 0.00 0.00 0.00 3.21
2309 12205 8.396390 CAGTCCTAGATTGAGAATGAAAACATG 58.604 37.037 0.00 0.00 0.00 3.21
2310 12206 7.555554 CCAGTCCTAGATTGAGAATGAAAACAT 59.444 37.037 0.00 0.00 0.00 2.71
2311 12207 6.881065 CCAGTCCTAGATTGAGAATGAAAACA 59.119 38.462 0.00 0.00 0.00 2.83
2312 12208 6.183360 GCCAGTCCTAGATTGAGAATGAAAAC 60.183 42.308 0.00 0.00 0.00 2.43
2313 12209 5.882557 GCCAGTCCTAGATTGAGAATGAAAA 59.117 40.000 0.00 0.00 0.00 2.29
2314 12210 5.045651 TGCCAGTCCTAGATTGAGAATGAAA 60.046 40.000 0.00 0.00 0.00 2.69
2315 12211 4.471025 TGCCAGTCCTAGATTGAGAATGAA 59.529 41.667 0.00 0.00 0.00 2.57
2316 12212 4.033009 TGCCAGTCCTAGATTGAGAATGA 58.967 43.478 0.00 0.00 0.00 2.57
2317 12213 4.141756 ACTGCCAGTCCTAGATTGAGAATG 60.142 45.833 0.00 0.00 0.00 2.67
2318 12214 4.036518 ACTGCCAGTCCTAGATTGAGAAT 58.963 43.478 0.00 0.00 0.00 2.40
2319 12215 3.445008 ACTGCCAGTCCTAGATTGAGAA 58.555 45.455 0.00 0.00 0.00 2.87
2320 12216 3.027412 GACTGCCAGTCCTAGATTGAGA 58.973 50.000 14.04 0.00 39.28 3.27
2321 12217 3.030291 AGACTGCCAGTCCTAGATTGAG 58.970 50.000 20.90 0.00 46.18 3.02
2322 12218 3.107402 AGACTGCCAGTCCTAGATTGA 57.893 47.619 20.90 0.00 46.18 2.57
2323 12219 3.243234 CGTAGACTGCCAGTCCTAGATTG 60.243 52.174 20.90 1.35 46.18 2.67
2324 12220 2.952978 CGTAGACTGCCAGTCCTAGATT 59.047 50.000 20.90 4.31 46.18 2.40
2325 12221 2.172930 TCGTAGACTGCCAGTCCTAGAT 59.827 50.000 20.90 5.04 46.18 1.98
2326 12222 1.558294 TCGTAGACTGCCAGTCCTAGA 59.442 52.381 20.90 14.15 46.18 2.43
2327 12223 2.039818 TCGTAGACTGCCAGTCCTAG 57.960 55.000 20.90 12.14 46.18 3.02
2328 12224 2.490903 GTTTCGTAGACTGCCAGTCCTA 59.509 50.000 20.90 10.03 46.18 2.94
2329 12225 1.272769 GTTTCGTAGACTGCCAGTCCT 59.727 52.381 20.90 10.98 46.18 3.85
2330 12226 1.000506 TGTTTCGTAGACTGCCAGTCC 59.999 52.381 20.90 6.15 46.18 3.85
2331 12227 2.433868 TGTTTCGTAGACTGCCAGTC 57.566 50.000 17.16 17.16 45.38 3.51
2332 12228 2.159014 TGTTGTTTCGTAGACTGCCAGT 60.159 45.455 0.00 0.00 34.32 4.00
2333 12229 2.479837 TGTTGTTTCGTAGACTGCCAG 58.520 47.619 0.00 0.00 34.32 4.85
2334 12230 2.605837 TGTTGTTTCGTAGACTGCCA 57.394 45.000 0.00 0.00 34.32 4.92
2335 12231 4.494199 GCATATGTTGTTTCGTAGACTGCC 60.494 45.833 4.29 0.00 34.32 4.85
2336 12232 4.330074 AGCATATGTTGTTTCGTAGACTGC 59.670 41.667 4.29 0.00 34.32 4.40
2337 12233 5.576774 TCAGCATATGTTGTTTCGTAGACTG 59.423 40.000 17.77 5.79 34.32 3.51
2338 12234 5.720202 TCAGCATATGTTGTTTCGTAGACT 58.280 37.500 17.77 0.00 34.32 3.24
2339 12235 6.310467 TCTTCAGCATATGTTGTTTCGTAGAC 59.690 38.462 17.77 0.00 34.32 2.59
2340 12236 6.394809 TCTTCAGCATATGTTGTTTCGTAGA 58.605 36.000 17.77 9.91 0.00 2.59
2341 12237 6.531594 TCTCTTCAGCATATGTTGTTTCGTAG 59.468 38.462 17.77 9.13 0.00 3.51
2342 12238 6.394809 TCTCTTCAGCATATGTTGTTTCGTA 58.605 36.000 17.77 0.00 0.00 3.43
2343 12239 5.237815 TCTCTTCAGCATATGTTGTTTCGT 58.762 37.500 17.77 0.00 0.00 3.85
2344 12240 5.220548 CCTCTCTTCAGCATATGTTGTTTCG 60.221 44.000 17.77 7.21 0.00 3.46
2345 12241 5.877012 TCCTCTCTTCAGCATATGTTGTTTC 59.123 40.000 17.77 0.00 0.00 2.78
2346 12242 5.645497 GTCCTCTCTTCAGCATATGTTGTTT 59.355 40.000 17.77 0.00 0.00 2.83
2347 12243 5.181748 GTCCTCTCTTCAGCATATGTTGTT 58.818 41.667 17.77 0.00 0.00 2.83
2348 12244 4.223700 TGTCCTCTCTTCAGCATATGTTGT 59.776 41.667 17.77 0.00 0.00 3.32
2349 12245 4.763073 TGTCCTCTCTTCAGCATATGTTG 58.237 43.478 12.97 12.97 0.00 3.33
2350 12246 5.129980 TGATGTCCTCTCTTCAGCATATGTT 59.870 40.000 4.29 0.00 0.00 2.71
2351 12247 4.652881 TGATGTCCTCTCTTCAGCATATGT 59.347 41.667 4.29 0.00 0.00 2.29
2352 12248 5.211174 TGATGTCCTCTCTTCAGCATATG 57.789 43.478 0.00 0.00 0.00 1.78
2353 12249 5.543020 TCATGATGTCCTCTCTTCAGCATAT 59.457 40.000 0.00 0.00 36.32 1.78
2354 12250 4.897670 TCATGATGTCCTCTCTTCAGCATA 59.102 41.667 0.00 0.00 36.32 3.14
2355 12251 3.710165 TCATGATGTCCTCTCTTCAGCAT 59.290 43.478 0.00 0.00 38.45 3.79
2356 12252 3.102204 TCATGATGTCCTCTCTTCAGCA 58.898 45.455 0.00 0.00 32.29 4.41
2357 12253 3.815856 TCATGATGTCCTCTCTTCAGC 57.184 47.619 0.00 0.00 0.00 4.26
2358 12254 5.524281 CACAATCATGATGTCCTCTCTTCAG 59.476 44.000 9.46 0.00 0.00 3.02
2359 12255 5.425630 CACAATCATGATGTCCTCTCTTCA 58.574 41.667 9.46 0.00 0.00 3.02
2360 12256 4.815308 CCACAATCATGATGTCCTCTCTTC 59.185 45.833 9.46 0.00 0.00 2.87
2361 12257 4.472470 TCCACAATCATGATGTCCTCTCTT 59.528 41.667 9.46 0.00 0.00 2.85
2362 12258 4.035814 TCCACAATCATGATGTCCTCTCT 58.964 43.478 9.46 0.00 0.00 3.10
2363 12259 4.412796 TCCACAATCATGATGTCCTCTC 57.587 45.455 9.46 0.00 0.00 3.20
2364 12260 4.411212 TCATCCACAATCATGATGTCCTCT 59.589 41.667 9.46 0.00 37.67 3.69
2365 12261 4.711399 TCATCCACAATCATGATGTCCTC 58.289 43.478 9.46 0.00 37.67 3.71
2366 12262 4.783560 TCATCCACAATCATGATGTCCT 57.216 40.909 9.46 0.00 37.67 3.85
2367 12263 7.110810 AGATATCATCCACAATCATGATGTCC 58.889 38.462 9.46 0.95 43.51 4.02
2368 12264 8.041919 AGAGATATCATCCACAATCATGATGTC 58.958 37.037 9.46 9.45 43.13 3.06
2369 12265 7.919151 AGAGATATCATCCACAATCATGATGT 58.081 34.615 9.46 6.95 39.58 3.06
2370 12266 8.669243 CAAGAGATATCATCCACAATCATGATG 58.331 37.037 9.46 6.30 39.58 3.07
2371 12267 8.383947 ACAAGAGATATCATCCACAATCATGAT 58.616 33.333 1.18 1.18 41.62 2.45
2372 12268 7.660208 CACAAGAGATATCATCCACAATCATGA 59.340 37.037 5.32 0.00 33.55 3.07
2373 12269 7.444487 ACACAAGAGATATCATCCACAATCATG 59.556 37.037 5.32 0.00 0.00 3.07
2374 12270 7.515586 ACACAAGAGATATCATCCACAATCAT 58.484 34.615 5.32 0.00 0.00 2.45
2375 12271 6.892485 ACACAAGAGATATCATCCACAATCA 58.108 36.000 5.32 0.00 0.00 2.57
2376 12272 7.714377 AGAACACAAGAGATATCATCCACAATC 59.286 37.037 5.32 0.00 0.00 2.67
2377 12273 7.571919 AGAACACAAGAGATATCATCCACAAT 58.428 34.615 5.32 0.00 0.00 2.71
2378 12274 6.950842 AGAACACAAGAGATATCATCCACAA 58.049 36.000 5.32 0.00 0.00 3.33
2379 12275 6.550938 AGAACACAAGAGATATCATCCACA 57.449 37.500 5.32 0.00 0.00 4.17
2380 12276 6.820656 ACAAGAACACAAGAGATATCATCCAC 59.179 38.462 5.32 0.00 0.00 4.02
2381 12277 6.950842 ACAAGAACACAAGAGATATCATCCA 58.049 36.000 5.32 0.00 0.00 3.41
2382 12278 7.044181 TGACAAGAACACAAGAGATATCATCC 58.956 38.462 5.32 0.00 0.00 3.51
2383 12279 8.484641 TTGACAAGAACACAAGAGATATCATC 57.515 34.615 5.32 0.05 0.00 2.92
2384 12280 8.725148 GTTTGACAAGAACACAAGAGATATCAT 58.275 33.333 5.32 0.00 0.00 2.45
2385 12281 7.095649 CGTTTGACAAGAACACAAGAGATATCA 60.096 37.037 5.32 0.00 0.00 2.15
2386 12282 7.230222 CGTTTGACAAGAACACAAGAGATATC 58.770 38.462 0.00 0.00 0.00 1.63
2387 12283 6.147821 CCGTTTGACAAGAACACAAGAGATAT 59.852 38.462 0.00 0.00 0.00 1.63
2388 12284 5.465390 CCGTTTGACAAGAACACAAGAGATA 59.535 40.000 0.00 0.00 0.00 1.98
2389 12285 4.273480 CCGTTTGACAAGAACACAAGAGAT 59.727 41.667 0.00 0.00 0.00 2.75
2390 12286 3.621268 CCGTTTGACAAGAACACAAGAGA 59.379 43.478 0.00 0.00 0.00 3.10
2391 12287 3.788797 GCCGTTTGACAAGAACACAAGAG 60.789 47.826 0.00 0.00 0.00 2.85
2392 12288 2.096819 GCCGTTTGACAAGAACACAAGA 59.903 45.455 0.00 0.00 0.00 3.02
2393 12289 2.097466 AGCCGTTTGACAAGAACACAAG 59.903 45.455 0.00 0.00 0.00 3.16
2394 12290 2.088423 AGCCGTTTGACAAGAACACAA 58.912 42.857 0.00 0.00 0.00 3.33
2395 12291 1.668751 GAGCCGTTTGACAAGAACACA 59.331 47.619 0.00 0.00 0.00 3.72
2396 12292 1.940613 AGAGCCGTTTGACAAGAACAC 59.059 47.619 0.00 0.00 0.00 3.32
2397 12293 1.939934 CAGAGCCGTTTGACAAGAACA 59.060 47.619 0.00 0.00 0.00 3.18
2398 12294 2.210116 TCAGAGCCGTTTGACAAGAAC 58.790 47.619 0.00 0.00 0.00 3.01
2399 12295 2.483876 CTCAGAGCCGTTTGACAAGAA 58.516 47.619 0.00 0.00 0.00 2.52
2400 12296 1.270305 CCTCAGAGCCGTTTGACAAGA 60.270 52.381 0.00 0.00 0.00 3.02
2401 12297 1.151668 CCTCAGAGCCGTTTGACAAG 58.848 55.000 0.00 0.00 0.00 3.16
2402 12298 0.468226 ACCTCAGAGCCGTTTGACAA 59.532 50.000 0.00 0.00 0.00 3.18
2403 12299 0.033504 GACCTCAGAGCCGTTTGACA 59.966 55.000 0.00 0.00 0.00 3.58
2404 12300 0.033504 TGACCTCAGAGCCGTTTGAC 59.966 55.000 0.00 0.00 0.00 3.18
2405 12301 0.976641 ATGACCTCAGAGCCGTTTGA 59.023 50.000 0.00 0.00 0.00 2.69
2406 12302 1.363744 GATGACCTCAGAGCCGTTTG 58.636 55.000 0.00 0.00 0.00 2.93
2407 12303 0.250513 GGATGACCTCAGAGCCGTTT 59.749 55.000 0.00 0.00 0.00 3.60
2408 12304 0.616111 AGGATGACCTCAGAGCCGTT 60.616 55.000 0.00 0.00 44.13 4.44
2409 12305 1.000993 AGGATGACCTCAGAGCCGT 59.999 57.895 0.00 0.00 44.13 5.68
2410 12306 1.326213 ACAGGATGACCTCAGAGCCG 61.326 60.000 0.00 0.00 45.94 5.52
2411 12307 0.177604 CACAGGATGACCTCAGAGCC 59.822 60.000 0.00 0.00 45.94 4.70
2412 12308 0.177604 CCACAGGATGACCTCAGAGC 59.822 60.000 0.00 0.00 45.94 4.09
2413 12309 0.177604 GCCACAGGATGACCTCAGAG 59.822 60.000 0.00 0.00 45.94 3.35
2414 12310 0.545071 TGCCACAGGATGACCTCAGA 60.545 55.000 0.00 0.00 45.94 3.27
2415 12311 0.107800 CTGCCACAGGATGACCTCAG 60.108 60.000 0.00 0.00 45.94 3.35
2416 12312 1.985614 CTGCCACAGGATGACCTCA 59.014 57.895 0.00 0.00 45.94 3.86
2417 12313 1.451028 GCTGCCACAGGATGACCTC 60.451 63.158 0.00 0.00 45.94 3.85
2419 12315 2.439156 GGCTGCCACAGGATGACC 60.439 66.667 15.17 0.00 39.69 4.02
2420 12316 2.439156 GGGCTGCCACAGGATGAC 60.439 66.667 22.05 0.00 39.69 3.06
2421 12317 2.537203 TTGGGCTGCCACAGGATGA 61.537 57.895 22.05 0.00 39.69 2.92
2422 12318 2.036098 TTGGGCTGCCACAGGATG 59.964 61.111 22.05 0.00 46.00 3.51
2423 12319 2.036256 GTTGGGCTGCCACAGGAT 59.964 61.111 22.05 0.00 31.21 3.24
2424 12320 2.370459 ATTGTTGGGCTGCCACAGGA 62.370 55.000 22.05 3.54 31.21 3.86
2425 12321 1.880819 GATTGTTGGGCTGCCACAGG 61.881 60.000 22.05 0.00 31.21 4.00
2426 12322 0.896940 AGATTGTTGGGCTGCCACAG 60.897 55.000 22.05 0.00 34.12 3.66
2427 12323 0.403655 TAGATTGTTGGGCTGCCACA 59.596 50.000 22.05 14.40 0.00 4.17
2428 12324 1.098050 CTAGATTGTTGGGCTGCCAC 58.902 55.000 22.05 11.68 0.00 5.01
2429 12325 0.991146 TCTAGATTGTTGGGCTGCCA 59.009 50.000 22.05 3.69 0.00 4.92
2430 12326 1.383523 GTCTAGATTGTTGGGCTGCC 58.616 55.000 11.05 11.05 0.00 4.85
2431 12327 1.383523 GGTCTAGATTGTTGGGCTGC 58.616 55.000 0.00 0.00 0.00 5.25
2432 12328 1.656652 CGGTCTAGATTGTTGGGCTG 58.343 55.000 0.00 0.00 0.00 4.85
2433 12329 0.541863 CCGGTCTAGATTGTTGGGCT 59.458 55.000 0.00 0.00 0.00 5.19
2434 12330 0.463833 CCCGGTCTAGATTGTTGGGC 60.464 60.000 0.00 0.00 0.00 5.36
2435 12331 1.139058 CTCCCGGTCTAGATTGTTGGG 59.861 57.143 0.00 3.65 36.48 4.12
2436 12332 1.139058 CCTCCCGGTCTAGATTGTTGG 59.861 57.143 0.00 0.00 0.00 3.77
2437 12333 2.108168 TCCTCCCGGTCTAGATTGTTG 58.892 52.381 0.00 0.00 0.00 3.33
2438 12334 2.544844 TCCTCCCGGTCTAGATTGTT 57.455 50.000 0.00 0.00 0.00 2.83
2439 12335 2.777459 ATCCTCCCGGTCTAGATTGT 57.223 50.000 0.00 0.00 0.00 2.71
2440 12336 3.895656 TGTAATCCTCCCGGTCTAGATTG 59.104 47.826 13.51 0.00 0.00 2.67
2441 12337 4.194678 TGTAATCCTCCCGGTCTAGATT 57.805 45.455 0.00 6.12 0.00 2.40
2442 12338 3.897657 TGTAATCCTCCCGGTCTAGAT 57.102 47.619 0.00 0.00 0.00 1.98
2443 12339 3.563223 CTTGTAATCCTCCCGGTCTAGA 58.437 50.000 0.00 0.00 0.00 2.43
2444 12340 2.628657 CCTTGTAATCCTCCCGGTCTAG 59.371 54.545 0.00 0.00 0.00 2.43
2445 12341 2.245546 TCCTTGTAATCCTCCCGGTCTA 59.754 50.000 0.00 0.00 0.00 2.59
2446 12342 1.007963 TCCTTGTAATCCTCCCGGTCT 59.992 52.381 0.00 0.00 0.00 3.85
2447 12343 1.492764 TCCTTGTAATCCTCCCGGTC 58.507 55.000 0.00 0.00 0.00 4.79
2448 12344 2.191981 ATCCTTGTAATCCTCCCGGT 57.808 50.000 0.00 0.00 0.00 5.28
2449 12345 3.258622 GTCTATCCTTGTAATCCTCCCGG 59.741 52.174 0.00 0.00 0.00 5.73
2450 12346 3.895656 TGTCTATCCTTGTAATCCTCCCG 59.104 47.826 0.00 0.00 0.00 5.14
2451 12347 5.148502 TCTGTCTATCCTTGTAATCCTCCC 58.851 45.833 0.00 0.00 0.00 4.30
2452 12348 6.495181 TCATCTGTCTATCCTTGTAATCCTCC 59.505 42.308 0.00 0.00 0.00 4.30
2453 12349 7.531857 TCATCTGTCTATCCTTGTAATCCTC 57.468 40.000 0.00 0.00 0.00 3.71
2454 12350 7.038445 CCATCATCTGTCTATCCTTGTAATCCT 60.038 40.741 0.00 0.00 0.00 3.24
2455 12351 7.102346 CCATCATCTGTCTATCCTTGTAATCC 58.898 42.308 0.00 0.00 0.00 3.01
2456 12352 7.038729 TCCCATCATCTGTCTATCCTTGTAATC 60.039 40.741 0.00 0.00 0.00 1.75
2457 12353 6.789457 TCCCATCATCTGTCTATCCTTGTAAT 59.211 38.462 0.00 0.00 0.00 1.89
2458 12354 6.143206 TCCCATCATCTGTCTATCCTTGTAA 58.857 40.000 0.00 0.00 0.00 2.41
2459 12355 5.715921 TCCCATCATCTGTCTATCCTTGTA 58.284 41.667 0.00 0.00 0.00 2.41
2460 12356 4.560739 TCCCATCATCTGTCTATCCTTGT 58.439 43.478 0.00 0.00 0.00 3.16
2461 12357 4.020396 CCTCCCATCATCTGTCTATCCTTG 60.020 50.000 0.00 0.00 0.00 3.61
2462 12358 4.166539 CCTCCCATCATCTGTCTATCCTT 58.833 47.826 0.00 0.00 0.00 3.36
2463 12359 3.788933 CCTCCCATCATCTGTCTATCCT 58.211 50.000 0.00 0.00 0.00 3.24
2464 12360 2.235898 GCCTCCCATCATCTGTCTATCC 59.764 54.545 0.00 0.00 0.00 2.59
2465 12361 2.235898 GGCCTCCCATCATCTGTCTATC 59.764 54.545 0.00 0.00 0.00 2.08
2466 12362 2.264455 GGCCTCCCATCATCTGTCTAT 58.736 52.381 0.00 0.00 0.00 1.98
2467 12363 1.062198 TGGCCTCCCATCATCTGTCTA 60.062 52.381 3.32 0.00 35.79 2.59
2468 12364 0.326904 TGGCCTCCCATCATCTGTCT 60.327 55.000 3.32 0.00 35.79 3.41
2469 12365 0.548031 TTGGCCTCCCATCATCTGTC 59.452 55.000 3.32 0.00 41.78 3.51
2470 12366 1.002069 TTTGGCCTCCCATCATCTGT 58.998 50.000 3.32 0.00 41.78 3.41
2471 12367 2.148446 TTTTGGCCTCCCATCATCTG 57.852 50.000 3.32 0.00 41.78 2.90
2472 12368 2.674420 CATTTTGGCCTCCCATCATCT 58.326 47.619 3.32 0.00 41.78 2.90
2473 12369 1.069668 GCATTTTGGCCTCCCATCATC 59.930 52.381 3.32 0.00 41.78 2.92
2474 12370 1.125633 GCATTTTGGCCTCCCATCAT 58.874 50.000 3.32 0.00 41.78 2.45
2475 12371 0.041535 AGCATTTTGGCCTCCCATCA 59.958 50.000 3.32 0.00 41.78 3.07
2476 12372 1.683385 GTAGCATTTTGGCCTCCCATC 59.317 52.381 3.32 0.00 41.78 3.51
2477 12373 1.006998 TGTAGCATTTTGGCCTCCCAT 59.993 47.619 3.32 0.00 41.78 4.00
2478 12374 0.407528 TGTAGCATTTTGGCCTCCCA 59.592 50.000 3.32 0.00 40.06 4.37
2479 12375 1.780503 ATGTAGCATTTTGGCCTCCC 58.219 50.000 3.32 0.00 0.00 4.30
2480 12376 3.893326 AAATGTAGCATTTTGGCCTCC 57.107 42.857 3.32 0.00 0.00 4.30
2481 12377 4.682787 GGTAAATGTAGCATTTTGGCCTC 58.317 43.478 3.32 0.00 0.00 4.70
2482 12378 3.130340 CGGTAAATGTAGCATTTTGGCCT 59.870 43.478 3.32 0.00 0.00 5.19
2483 12379 3.129638 TCGGTAAATGTAGCATTTTGGCC 59.870 43.478 11.59 0.00 0.00 5.36
2484 12380 4.364415 TCGGTAAATGTAGCATTTTGGC 57.636 40.909 11.59 4.46 0.00 4.52
2485 12381 4.798387 GCTTCGGTAAATGTAGCATTTTGG 59.202 41.667 11.59 3.65 30.99 3.28
2486 12382 5.640732 AGCTTCGGTAAATGTAGCATTTTG 58.359 37.500 11.59 4.37 32.80 2.44
2487 12383 5.897377 AGCTTCGGTAAATGTAGCATTTT 57.103 34.783 11.59 0.00 32.80 1.82
2488 12384 5.897377 AAGCTTCGGTAAATGTAGCATTT 57.103 34.783 11.18 11.18 32.80 2.32
2489 12385 5.897377 AAAGCTTCGGTAAATGTAGCATT 57.103 34.783 0.00 0.00 32.80 3.56
2490 12386 8.721478 CATATAAAGCTTCGGTAAATGTAGCAT 58.279 33.333 0.00 0.00 32.80 3.79
2491 12387 8.083462 CATATAAAGCTTCGGTAAATGTAGCA 57.917 34.615 0.00 0.00 32.80 3.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.