Multiple sequence alignment - TraesCS3D01G032000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G032000 chr3D 100.000 8171 0 0 1001 9171 11755792 11763962 0.000000e+00 15090.0
1 TraesCS3D01G032000 chr3D 100.000 725 0 0 1 725 11754792 11755516 0.000000e+00 1339.0
2 TraesCS3D01G032000 chr3D 84.707 922 101 16 2034 2933 11756497 11757400 0.000000e+00 885.0
3 TraesCS3D01G032000 chr3D 84.707 922 101 16 1706 2609 11756825 11757724 0.000000e+00 885.0
4 TraesCS3D01G032000 chr3D 84.776 335 33 6 7723 8057 11778919 11779235 4.130000e-83 320.0
5 TraesCS3D01G032000 chr3B 94.033 7307 286 76 1086 8335 16448718 16455931 0.000000e+00 10940.0
6 TraesCS3D01G032000 chr3B 85.066 904 108 17 2039 2933 16449322 16450207 0.000000e+00 896.0
7 TraesCS3D01G032000 chr3B 83.766 924 111 18 1706 2614 16449633 16450532 0.000000e+00 839.0
8 TraesCS3D01G032000 chr3B 92.828 488 32 3 1 487 16446885 16447370 0.000000e+00 704.0
9 TraesCS3D01G032000 chr3B 81.722 569 76 17 1745 2296 16449978 16450535 5.050000e-122 449.0
10 TraesCS3D01G032000 chr3B 86.575 365 39 10 103 465 16445893 16446249 2.400000e-105 394.0
11 TraesCS3D01G032000 chr3B 93.678 174 8 2 554 725 16448027 16448199 3.290000e-64 257.0
12 TraesCS3D01G032000 chr3B 79.882 338 35 10 8736 9070 16456400 16456707 5.580000e-52 217.0
13 TraesCS3D01G032000 chr3B 90.179 112 11 0 8628 8739 16456188 16456299 7.420000e-31 147.0
14 TraesCS3D01G032000 chr3B 94.231 52 3 0 481 532 16447470 16447521 7.630000e-11 80.5
15 TraesCS3D01G032000 chr3A 95.773 6671 229 21 1709 8360 25362418 25355782 0.000000e+00 10707.0
16 TraesCS3D01G032000 chr3A 85.388 1971 186 54 1007 2933 25363439 25361527 0.000000e+00 1951.0
17 TraesCS3D01G032000 chr3A 83.793 907 106 14 1729 2617 25362079 25361196 0.000000e+00 822.0
18 TraesCS3D01G032000 chr3A 86.992 492 49 12 3 485 25365385 25364900 2.910000e-149 540.0
19 TraesCS3D01G032000 chr3A 89.535 430 40 5 38 466 25367040 25366615 2.910000e-149 540.0
20 TraesCS3D01G032000 chr3A 90.652 353 28 4 8628 8975 25355718 25355366 1.800000e-126 464.0
21 TraesCS3D01G032000 chr3A 85.794 359 42 7 7824 8179 25346175 25345823 1.120000e-98 372.0
22 TraesCS3D01G032000 chr3A 78.033 305 34 16 7703 8005 25257766 25257493 2.650000e-35 161.0
23 TraesCS3D01G032000 chr3A 87.879 66 7 1 660 725 25364084 25364020 9.870000e-10 76.8
24 TraesCS3D01G032000 chr2A 92.226 283 21 1 3355 3636 479851277 479851559 5.160000e-107 399.0
25 TraesCS3D01G032000 chr2A 91.873 283 22 1 3355 3636 479841325 479841607 2.400000e-105 394.0
26 TraesCS3D01G032000 chr2A 85.985 264 19 7 3374 3636 537975420 537975666 5.460000e-67 267.0
27 TraesCS3D01G032000 chr2A 89.697 165 14 2 3703 3864 537975665 537975829 3.360000e-49 207.0
28 TraesCS3D01G032000 chr2A 96.364 55 2 0 4263 4317 479841806 479841860 3.530000e-14 91.6
29 TraesCS3D01G032000 chr2A 94.545 55 3 0 4083 4137 479851706 479851760 1.640000e-12 86.1
30 TraesCS3D01G032000 chr2A 94.643 56 2 1 4263 4317 479851758 479851813 1.640000e-12 86.1
31 TraesCS3D01G032000 chr2A 90.909 55 5 0 4083 4137 479841754 479841808 3.550000e-09 75.0
32 TraesCS3D01G032000 chr5A 91.039 279 24 1 3358 3635 234895422 234895144 8.690000e-100 375.0
33 TraesCS3D01G032000 chr6D 87.083 240 27 3 8179 8417 348087607 348087843 1.520000e-67 268.0
34 TraesCS3D01G032000 chr6D 93.529 170 11 0 3345 3514 353206796 353206965 4.250000e-63 254.0
35 TraesCS3D01G032000 chr7D 84.810 237 32 3 8182 8417 363048913 363048680 1.540000e-57 235.0
36 TraesCS3D01G032000 chr7D 82.500 240 36 5 8179 8417 136262961 136263195 1.210000e-48 206.0
37 TraesCS3D01G032000 chr7B 85.778 225 28 3 8179 8402 322488704 322488483 1.540000e-57 235.0
38 TraesCS3D01G032000 chr7B 83.333 240 30 6 8179 8417 505937590 505937820 7.210000e-51 213.0
39 TraesCS3D01G032000 chrUn 84.388 237 32 4 8183 8418 23111020 23110788 2.580000e-55 228.0
40 TraesCS3D01G032000 chr4B 83.951 243 33 5 8177 8417 86649496 86649734 2.580000e-55 228.0
41 TraesCS3D01G032000 chr2B 84.519 239 25 10 8184 8417 236043179 236042948 9.270000e-55 226.0
42 TraesCS3D01G032000 chr2B 96.364 55 2 0 4263 4317 555927917 555927863 3.530000e-14 91.6
43 TraesCS3D01G032000 chr7A 83.750 240 35 3 8179 8417 394762717 394762953 3.330000e-54 224.0
44 TraesCS3D01G032000 chr6B 90.588 170 13 2 3347 3514 479035554 479035722 1.200000e-53 222.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G032000 chr3D 11754792 11763962 9170 False 8214.500000 15090 100.000000 1 9171 2 chr3D.!!$F2 9170
1 TraesCS3D01G032000 chr3D 11756497 11757724 1227 False 885.000000 885 84.707000 1706 2933 2 chr3D.!!$F3 1227
2 TraesCS3D01G032000 chr3B 16445893 16455931 10038 False 2475.100000 10940 92.269000 1 8335 5 chr3B.!!$F1 8334
3 TraesCS3D01G032000 chr3B 16449322 16450535 1213 False 728.000000 896 83.518000 1706 2933 3 chr3B.!!$F2 1227
4 TraesCS3D01G032000 chr3A 25355366 25367040 11674 True 2157.257143 10707 88.573143 3 8975 7 chr3A.!!$R3 8972

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
313 1970 0.106719 AGGGGGTGGAATAACATGCG 60.107 55.000 0.00 0.0 0.00 4.73 F
1369 4016 0.457337 GCGTATTCCGTCCAACTCGT 60.457 55.000 0.00 0.0 39.32 4.18 F
1456 4105 0.107703 TAGGGAGTTGCTCAATGGCG 60.108 55.000 0.00 0.0 34.52 5.69 F
1458 4107 1.377202 GGAGTTGCTCAATGGCGGA 60.377 57.895 0.00 0.0 34.52 5.54 F
1486 4138 1.675641 AGGACATGCGGTTTCTGCC 60.676 57.895 0.00 0.0 0.00 4.85 F
3018 5996 2.307098 GGATCCTTATCCCCTGTGATGG 59.693 54.545 3.84 0.0 45.37 3.51 F
4845 7823 0.470766 AACAAGGCGTGTGGGTCTTA 59.529 50.000 6.88 0.0 40.60 2.10 F
5481 8460 3.370846 CCTGCTCCATTCATGACCTGTAA 60.371 47.826 0.00 0.0 0.00 2.41 F
6654 9639 0.323629 CCACAAGCTCCTCCGGTAAA 59.676 55.000 0.00 0.0 0.00 2.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1442 4091 0.036732 TCTTCCGCCATTGAGCAACT 59.963 50.000 0.00 0.0 0.00 3.16 R
3185 6163 3.583526 AGGAGGACAAAAGAAGTAGGTCC 59.416 47.826 0.00 0.0 46.54 4.46 R
3190 6168 5.367945 ACAACAGGAGGACAAAAGAAGTA 57.632 39.130 0.00 0.0 0.00 2.24 R
3322 6300 5.425217 TCCTGGTTCTTCTCAGCAATACATA 59.575 40.000 0.00 0.0 0.00 2.29 R
3836 6814 1.833630 TCCCTGATGCGTCTCAAATCT 59.166 47.619 7.58 0.0 0.00 2.40 R
4900 7878 1.123861 AGGCTCCTCTGAGTGCAACA 61.124 55.000 17.41 0.0 41.43 3.33 R
5688 8667 0.105039 GGTGCTACGGAGAGGAATGG 59.895 60.000 0.00 0.0 0.00 3.16 R
6869 9854 0.393537 CATTCCCTCTGCCAGTCCAC 60.394 60.000 0.00 0.0 0.00 4.02 R
8870 11898 0.030369 AACACTATCGATCGACGCCC 59.970 55.000 22.06 0.0 42.26 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 1671 2.034066 CCAATGGACACGGTGGCT 59.966 61.111 14.66 0.00 0.00 4.75
58 1713 9.586732 TGAAAATATATATTTTGAGAGGTGGGG 57.413 33.333 29.48 0.00 43.67 4.96
158 1814 5.163622 CCATTTTCCACTATCCACACATGTC 60.164 44.000 0.00 0.00 0.00 3.06
159 1815 4.632327 TTTCCACTATCCACACATGTCA 57.368 40.909 0.00 0.00 0.00 3.58
175 1832 5.067674 CACATGTCAGAAAAAGGAAAGTCCA 59.932 40.000 0.00 0.00 39.61 4.02
209 1866 6.486993 ACTTGAATCCTCAACCAAAGTAGTTC 59.513 38.462 0.00 0.00 36.62 3.01
212 1869 7.386851 TGAATCCTCAACCAAAGTAGTTCTAG 58.613 38.462 0.00 0.00 0.00 2.43
288 1945 3.935828 TGATCTGTCAAAACAACGTCACA 59.064 39.130 0.00 0.00 34.24 3.58
289 1946 4.393371 TGATCTGTCAAAACAACGTCACAA 59.607 37.500 0.00 0.00 34.24 3.33
313 1970 0.106719 AGGGGGTGGAATAACATGCG 60.107 55.000 0.00 0.00 0.00 4.73
328 1985 7.786178 ATAACATGCGTAGACAATGTTATGT 57.214 32.000 19.80 7.28 42.98 2.29
470 2130 3.188460 CCCGTACACATTGTGAGGAAAAG 59.812 47.826 23.12 6.95 36.96 2.27
487 2147 8.556589 TGAGGAAAAGAAGGTAATATCCAATGA 58.443 33.333 0.00 0.00 0.00 2.57
488 2148 9.408648 GAGGAAAAGAAGGTAATATCCAATGAA 57.591 33.333 0.00 0.00 0.00 2.57
538 2306 7.368480 TGTTAGGAAATAGTTTAAGGAACGC 57.632 36.000 0.00 0.00 43.20 4.84
539 2307 6.091169 TGTTAGGAAATAGTTTAAGGAACGCG 59.909 38.462 3.53 3.53 43.20 6.01
540 2308 4.824289 AGGAAATAGTTTAAGGAACGCGA 58.176 39.130 15.93 0.00 43.20 5.87
542 2310 5.293569 AGGAAATAGTTTAAGGAACGCGATG 59.706 40.000 15.93 0.00 43.20 3.84
543 2311 4.531659 AATAGTTTAAGGAACGCGATGC 57.468 40.909 15.93 6.39 43.20 3.91
554 2322 3.799753 GCGATGCGAAGGATGTGT 58.200 55.556 0.00 0.00 40.04 3.72
555 2323 1.349627 GCGATGCGAAGGATGTGTG 59.650 57.895 0.00 0.00 40.04 3.82
556 2324 1.349627 CGATGCGAAGGATGTGTGC 59.650 57.895 0.00 0.00 40.04 4.57
557 2325 1.349627 GATGCGAAGGATGTGTGCG 59.650 57.895 0.00 0.00 40.04 5.34
558 2326 1.361668 GATGCGAAGGATGTGTGCGT 61.362 55.000 0.00 0.00 40.04 5.24
610 2905 4.680237 CTCAACAGCGACCCGGCA 62.680 66.667 0.00 0.00 34.64 5.69
1063 3692 3.721706 CTCCACCCCAGGTCAGCC 61.722 72.222 0.00 0.00 31.02 4.85
1127 3756 4.914420 CGCGCTCGATTCTCCGCT 62.914 66.667 5.56 0.00 43.84 5.52
1237 3866 3.998672 GTGGTGGTCGGGCTTCGA 61.999 66.667 0.00 0.00 46.77 3.71
1244 3878 3.399181 TCGGGCTTCGATTGGGCT 61.399 61.111 0.00 0.00 43.74 5.19
1294 3928 4.660938 GGGCGGTTGCTTCCCTGT 62.661 66.667 0.00 0.00 42.25 4.00
1296 3930 3.365265 GCGGTTGCTTCCCTGTGG 61.365 66.667 0.00 0.00 38.39 4.17
1297 3931 2.113139 CGGTTGCTTCCCTGTGGT 59.887 61.111 0.00 0.00 0.00 4.16
1298 3932 1.966451 CGGTTGCTTCCCTGTGGTC 60.966 63.158 0.00 0.00 0.00 4.02
1300 3934 1.966451 GTTGCTTCCCTGTGGTCCG 60.966 63.158 0.00 0.00 0.00 4.79
1321 3956 3.723260 GGATTGATTCGGAGAAGAGGAC 58.277 50.000 0.00 0.00 45.90 3.85
1369 4016 0.457337 GCGTATTCCGTCCAACTCGT 60.457 55.000 0.00 0.00 39.32 4.18
1401 4049 4.348168 GGCCTCCTTCTCTGGTTATTATGA 59.652 45.833 0.00 0.00 0.00 2.15
1402 4050 5.301555 GCCTCCTTCTCTGGTTATTATGAC 58.698 45.833 0.00 0.00 0.00 3.06
1408 4056 8.328758 TCCTTCTCTGGTTATTATGACATGTTT 58.671 33.333 0.00 0.00 0.00 2.83
1438 4087 3.752747 TGTTGACGTGGTAATCGAGACTA 59.247 43.478 0.00 0.00 0.00 2.59
1439 4088 4.142752 TGTTGACGTGGTAATCGAGACTAG 60.143 45.833 0.00 0.00 0.00 2.57
1440 4089 2.941064 TGACGTGGTAATCGAGACTAGG 59.059 50.000 0.00 0.00 0.00 3.02
1441 4090 2.290093 GACGTGGTAATCGAGACTAGGG 59.710 54.545 0.00 0.00 0.00 3.53
1442 4091 2.092753 ACGTGGTAATCGAGACTAGGGA 60.093 50.000 9.89 0.00 0.00 4.20
1444 4093 3.553904 GTGGTAATCGAGACTAGGGAGT 58.446 50.000 0.00 0.00 39.20 3.85
1445 4094 3.952967 GTGGTAATCGAGACTAGGGAGTT 59.047 47.826 0.00 0.00 35.45 3.01
1446 4095 3.952323 TGGTAATCGAGACTAGGGAGTTG 59.048 47.826 0.00 0.00 35.45 3.16
1447 4096 3.243468 GGTAATCGAGACTAGGGAGTTGC 60.243 52.174 0.00 0.00 35.45 4.17
1448 4097 2.445682 ATCGAGACTAGGGAGTTGCT 57.554 50.000 0.00 0.00 35.45 3.91
1449 4098 1.752683 TCGAGACTAGGGAGTTGCTC 58.247 55.000 0.00 0.00 35.45 4.26
1450 4099 1.004394 TCGAGACTAGGGAGTTGCTCA 59.996 52.381 0.00 0.00 35.45 4.26
1451 4100 1.819288 CGAGACTAGGGAGTTGCTCAA 59.181 52.381 0.00 0.00 35.45 3.02
1452 4101 2.428890 CGAGACTAGGGAGTTGCTCAAT 59.571 50.000 0.00 0.00 35.45 2.57
1453 4102 3.736433 CGAGACTAGGGAGTTGCTCAATG 60.736 52.174 0.00 0.00 35.45 2.82
1454 4103 2.503356 AGACTAGGGAGTTGCTCAATGG 59.497 50.000 0.00 0.00 35.45 3.16
1455 4104 1.065126 ACTAGGGAGTTGCTCAATGGC 60.065 52.381 0.00 0.00 28.61 4.40
1456 4105 0.107703 TAGGGAGTTGCTCAATGGCG 60.108 55.000 0.00 0.00 34.52 5.69
1457 4106 2.409870 GGGAGTTGCTCAATGGCGG 61.410 63.158 0.00 0.00 34.52 6.13
1458 4107 1.377202 GGAGTTGCTCAATGGCGGA 60.377 57.895 0.00 0.00 34.52 5.54
1471 4123 2.683933 GCGGAAGAGGGGACAGGA 60.684 66.667 0.00 0.00 0.00 3.86
1486 4138 1.675641 AGGACATGCGGTTTCTGCC 60.676 57.895 0.00 0.00 0.00 4.85
1509 4163 3.303938 TGCTGTCCAGGGATTTGAAAAA 58.696 40.909 0.00 0.00 0.00 1.94
1539 4193 6.553100 ACTCCTACTAGGATTGGATTGAGAAG 59.447 42.308 5.20 0.00 44.81 2.85
1545 4199 8.572855 ACTAGGATTGGATTGAGAAGAAAAAG 57.427 34.615 0.00 0.00 0.00 2.27
1624 4287 3.599730 CTCAGTGAGGTGTATGAGCAA 57.400 47.619 12.67 0.00 33.41 3.91
1687 4350 9.510062 TTTATTAAGTGGGTTATCCTTCCTCTA 57.490 33.333 0.00 0.00 36.20 2.43
1692 4355 4.531339 GTGGGTTATCCTTCCTCTATACCC 59.469 50.000 0.00 0.00 36.20 3.69
2934 5912 2.354510 TCTTTCCGTTGCTGTTTCAGTG 59.645 45.455 0.00 0.00 33.43 3.66
2955 5933 8.615705 TCAGTGGAATCCTTCTATAGCTAGATA 58.384 37.037 0.00 0.00 33.98 1.98
2958 5936 9.196139 GTGGAATCCTTCTATAGCTAGATACAT 57.804 37.037 0.00 0.00 33.98 2.29
2994 5972 6.184789 TCACATGGATTTTCTTACCCTAACC 58.815 40.000 0.00 0.00 0.00 2.85
3018 5996 2.307098 GGATCCTTATCCCCTGTGATGG 59.693 54.545 3.84 0.00 45.37 3.51
3142 6120 6.261118 TGCATTTGTTTTGTTGGTTTAATGC 58.739 32.000 0.00 0.00 44.04 3.56
3149 6127 8.723942 TGTTTTGTTGGTTTAATGCTAATTGT 57.276 26.923 0.00 0.00 0.00 2.71
3185 6163 7.568134 GCTGTCTGAATTGCTAATGTTGTTTTG 60.568 37.037 0.00 0.00 0.00 2.44
3190 6168 5.806654 ATTGCTAATGTTGTTTTGGACCT 57.193 34.783 0.00 0.00 0.00 3.85
3322 6300 2.986728 AGAACCTACCAAATGTCCCTGT 59.013 45.455 0.00 0.00 0.00 4.00
3791 6769 2.808543 GGATGTCAGTCTTGTGGTTGAC 59.191 50.000 0.00 0.00 40.17 3.18
3836 6814 7.118723 AGATGATTAAGGGTGTATCTGCAAAA 58.881 34.615 0.00 0.00 0.00 2.44
4172 7150 5.059161 GCTGTCATAGTCTATTGGATTGCA 58.941 41.667 0.00 0.00 0.00 4.08
4845 7823 0.470766 AACAAGGCGTGTGGGTCTTA 59.529 50.000 6.88 0.00 40.60 2.10
4900 7878 7.936847 TGTGTCTGTATCATGGTTTAAGTCTTT 59.063 33.333 0.00 0.00 0.00 2.52
5097 8075 5.330455 TGTAGATTCTGAAGAAGCATCGT 57.670 39.130 10.65 0.00 42.42 3.73
5264 8242 4.569564 GGATCGGTGTCAAAGGTATTACAC 59.430 45.833 0.00 0.00 41.14 2.90
5305 8283 6.211184 AGGAAGTGCCATCATTTATGTGAAAA 59.789 34.615 0.00 0.00 40.02 2.29
5374 8352 6.262323 TCGTTTGATTTTTAACTTTTGCCG 57.738 33.333 0.00 0.00 0.00 5.69
5481 8460 3.370846 CCTGCTCCATTCATGACCTGTAA 60.371 47.826 0.00 0.00 0.00 2.41
5498 8477 7.232534 TGACCTGTAAATTTTGCTAATGGTCTT 59.767 33.333 20.11 0.00 40.37 3.01
5585 8564 3.763360 CGATAGATGATGGAGCTCCTTCT 59.237 47.826 35.60 28.82 38.49 2.85
5710 8689 1.183549 TTCCTCTCCGTAGCACCTTC 58.816 55.000 0.00 0.00 0.00 3.46
5757 8739 2.057137 TGCTGCTTTCTGTTTCAGGT 57.943 45.000 0.00 0.00 31.51 4.00
6044 9026 1.892819 ATCGGAGAGCACCACTGTGG 61.893 60.000 24.80 24.80 43.63 4.17
6214 9196 9.625747 TTTGTGTCACATCCATACATGTATTAT 57.374 29.630 15.85 9.69 35.10 1.28
6486 9471 8.918202 AGACAAGTATGTTATGGTTTTCTGAA 57.082 30.769 0.00 0.00 40.74 3.02
6613 9598 5.709164 CCAAGATGGTCTGTTCTTCTTTGAT 59.291 40.000 0.00 0.00 31.35 2.57
6654 9639 0.323629 CCACAAGCTCCTCCGGTAAA 59.676 55.000 0.00 0.00 0.00 2.01
6689 9674 6.709018 AACTATTTTTGTTACCACAGCTGT 57.291 33.333 15.25 15.25 33.22 4.40
6730 9715 0.333993 AGCCCATGGAGCTTGATGTT 59.666 50.000 15.22 0.00 37.24 2.71
6755 9740 4.006319 GCTGATACTGCCTTCAACTTTCT 58.994 43.478 0.00 0.00 0.00 2.52
6869 9854 7.813645 AGGTTTGTTTAAGCCTCTTAAATACG 58.186 34.615 12.96 0.00 43.15 3.06
6959 9944 0.622665 AGGGGCTGGTTCTCAATGAG 59.377 55.000 3.38 3.38 0.00 2.90
6974 9959 5.882557 TCTCAATGAGAAGCCCTATTTCAAC 59.117 40.000 10.99 0.00 35.59 3.18
7107 10092 2.897969 CGGCCTCCTATGGTAATACACT 59.102 50.000 0.00 0.00 0.00 3.55
7125 10110 2.272170 TCCCCCTCCCCCTCTTGAT 61.272 63.158 0.00 0.00 0.00 2.57
7131 10116 1.771255 CCTCCCCCTCTTGATAACCAG 59.229 57.143 0.00 0.00 0.00 4.00
7163 10148 6.183360 GGTGTCATGCTGTCATTAAGTAGTTC 60.183 42.308 0.00 0.00 0.00 3.01
7166 10151 7.064966 TGTCATGCTGTCATTAAGTAGTTCATG 59.935 37.037 0.00 0.00 0.00 3.07
7168 10153 7.823799 TCATGCTGTCATTAAGTAGTTCATGAA 59.176 33.333 3.38 3.38 35.23 2.57
7173 10158 9.376075 CTGTCATTAAGTAGTTCATGAATCAGT 57.624 33.333 12.12 2.72 29.92 3.41
7257 10242 5.999044 ACTTCTCTGTCATGAGCCAATATT 58.001 37.500 0.00 0.00 34.29 1.28
7263 10248 7.012989 TCTCTGTCATGAGCCAATATTCATTTG 59.987 37.037 0.00 0.00 31.91 2.32
7408 10398 1.280746 CAGTGTTGCTTCGTGGCAG 59.719 57.895 0.00 0.00 43.39 4.85
7567 10560 8.445275 TGTTCTGATTGTTACATGTACTGTTT 57.555 30.769 4.68 0.00 39.39 2.83
7845 10841 1.967319 ACCGCTCAAGAAAGCTGAAA 58.033 45.000 0.00 0.00 40.23 2.69
7847 10843 2.887152 ACCGCTCAAGAAAGCTGAAAAT 59.113 40.909 0.00 0.00 40.23 1.82
7875 10871 4.335594 CCGAGGGTTGTATTCAAATCTTCC 59.664 45.833 0.00 0.00 35.20 3.46
7877 10873 4.610333 AGGGTTGTATTCAAATCTTCCCC 58.390 43.478 4.63 2.19 36.26 4.81
7904 10900 7.652909 TGGCTTGAGAAAACATGATAAAACTTG 59.347 33.333 0.00 0.00 0.00 3.16
8092 11100 8.172070 TGTTAAGGTACCCTTATTTTAAAGGCT 58.828 33.333 8.74 0.00 44.38 4.58
8129 11137 6.975197 GCAAGATTAAGCCTAGAAATTCCAAC 59.025 38.462 0.00 0.00 0.00 3.77
8134 11142 3.870274 AGCCTAGAAATTCCAACGGTAC 58.130 45.455 0.00 0.00 0.00 3.34
8152 11160 2.205022 ACAGATGCAGCTGGCTAAAA 57.795 45.000 33.28 0.00 45.15 1.52
8153 11161 2.731572 ACAGATGCAGCTGGCTAAAAT 58.268 42.857 33.28 10.00 45.15 1.82
8155 11163 4.272489 ACAGATGCAGCTGGCTAAAATAA 58.728 39.130 33.28 0.00 45.15 1.40
8156 11164 4.891756 ACAGATGCAGCTGGCTAAAATAAT 59.108 37.500 33.28 7.72 45.15 1.28
8158 11166 6.206243 ACAGATGCAGCTGGCTAAAATAATAG 59.794 38.462 33.28 5.79 45.15 1.73
8168 11176 7.495606 GCTGGCTAAAATAATAGTGGCATTTTT 59.504 33.333 0.00 0.00 34.57 1.94
8171 11179 9.249457 GGCTAAAATAATAGTGGCATTTTTCTC 57.751 33.333 0.00 0.00 34.57 2.87
8186 11208 0.601841 TTCTCCAGCGGTCCGTTTTC 60.602 55.000 13.94 0.00 0.00 2.29
8195 11217 2.740447 GCGGTCCGTTTTCATTTACTCT 59.260 45.455 13.94 0.00 0.00 3.24
8196 11218 3.187842 GCGGTCCGTTTTCATTTACTCTT 59.812 43.478 13.94 0.00 0.00 2.85
8199 11221 5.121768 CGGTCCGTTTTCATTTACTCTTCAT 59.878 40.000 2.08 0.00 0.00 2.57
8374 11396 7.876896 TTGTTTTCTACAAACTTGGTCAAAC 57.123 32.000 0.00 0.00 43.58 2.93
8375 11397 7.222000 TGTTTTCTACAAACTTGGTCAAACT 57.778 32.000 0.00 0.00 32.64 2.66
8376 11398 7.662897 TGTTTTCTACAAACTTGGTCAAACTT 58.337 30.769 0.00 0.00 32.64 2.66
8377 11399 7.810759 TGTTTTCTACAAACTTGGTCAAACTTC 59.189 33.333 0.00 0.00 32.64 3.01
8378 11400 7.455641 TTTCTACAAACTTGGTCAAACTTCA 57.544 32.000 0.00 0.00 0.00 3.02
8379 11401 7.639113 TTCTACAAACTTGGTCAAACTTCAT 57.361 32.000 0.00 0.00 0.00 2.57
8380 11402 8.740123 TTCTACAAACTTGGTCAAACTTCATA 57.260 30.769 0.00 0.00 0.00 2.15
8381 11403 8.740123 TCTACAAACTTGGTCAAACTTCATAA 57.260 30.769 0.00 0.00 0.00 1.90
8382 11404 9.179909 TCTACAAACTTGGTCAAACTTCATAAA 57.820 29.630 0.00 0.00 0.00 1.40
8383 11405 9.450807 CTACAAACTTGGTCAAACTTCATAAAG 57.549 33.333 0.00 0.00 38.54 1.85
8398 11420 8.441312 ACTTCATAAAGTTTGACTTCGGTAAA 57.559 30.769 0.00 0.00 43.28 2.01
8399 11421 8.557029 ACTTCATAAAGTTTGACTTCGGTAAAG 58.443 33.333 0.00 0.00 43.28 1.85
8400 11422 6.894828 TCATAAAGTTTGACTTCGGTAAAGC 58.105 36.000 0.00 0.00 37.47 3.51
8401 11423 6.708949 TCATAAAGTTTGACTTCGGTAAAGCT 59.291 34.615 0.00 0.00 37.47 3.74
8402 11424 7.874016 TCATAAAGTTTGACTTCGGTAAAGCTA 59.126 33.333 0.00 0.00 37.47 3.32
8403 11425 6.930667 AAAGTTTGACTTCGGTAAAGCTAA 57.069 33.333 0.00 0.00 37.47 3.09
8404 11426 7.506328 AAAGTTTGACTTCGGTAAAGCTAAT 57.494 32.000 0.00 0.00 37.47 1.73
8405 11427 8.611654 AAAGTTTGACTTCGGTAAAGCTAATA 57.388 30.769 0.00 0.00 37.47 0.98
8406 11428 8.788325 AAGTTTGACTTCGGTAAAGCTAATAT 57.212 30.769 0.00 0.00 38.67 1.28
8407 11429 8.197988 AGTTTGACTTCGGTAAAGCTAATATG 57.802 34.615 0.00 0.00 38.67 1.78
8408 11430 6.598753 TTGACTTCGGTAAAGCTAATATGC 57.401 37.500 0.00 0.00 38.67 3.14
8409 11431 5.914033 TGACTTCGGTAAAGCTAATATGCT 58.086 37.500 0.00 0.00 46.40 3.79
8410 11432 5.753438 TGACTTCGGTAAAGCTAATATGCTG 59.247 40.000 0.00 0.00 43.24 4.41
8411 11433 5.914033 ACTTCGGTAAAGCTAATATGCTGA 58.086 37.500 0.00 0.00 43.24 4.26
8412 11434 5.986135 ACTTCGGTAAAGCTAATATGCTGAG 59.014 40.000 0.00 0.00 43.24 3.35
8413 11435 5.531122 TCGGTAAAGCTAATATGCTGAGT 57.469 39.130 0.00 0.00 43.24 3.41
8414 11436 6.644248 TCGGTAAAGCTAATATGCTGAGTA 57.356 37.500 0.00 0.00 43.24 2.59
8415 11437 7.046292 TCGGTAAAGCTAATATGCTGAGTAA 57.954 36.000 0.00 0.00 43.24 2.24
8416 11438 7.494211 TCGGTAAAGCTAATATGCTGAGTAAA 58.506 34.615 0.00 0.00 43.24 2.01
8417 11439 7.437267 TCGGTAAAGCTAATATGCTGAGTAAAC 59.563 37.037 0.00 0.00 43.24 2.01
8418 11440 7.438459 CGGTAAAGCTAATATGCTGAGTAAACT 59.562 37.037 0.00 0.00 43.24 2.66
8419 11441 9.110502 GGTAAAGCTAATATGCTGAGTAAACTT 57.889 33.333 0.00 0.00 43.24 2.66
8421 11443 8.792830 AAAGCTAATATGCTGAGTAAACTTCA 57.207 30.769 0.00 0.00 43.24 3.02
8422 11444 8.970859 AAGCTAATATGCTGAGTAAACTTCAT 57.029 30.769 0.00 0.00 43.24 2.57
8485 11508 5.536538 TGGCATGTGTACCTGAAAAATACAA 59.463 36.000 0.00 0.00 30.90 2.41
8486 11509 6.040955 TGGCATGTGTACCTGAAAAATACAAA 59.959 34.615 0.00 0.00 30.90 2.83
8487 11510 7.096551 GGCATGTGTACCTGAAAAATACAAAT 58.903 34.615 0.00 0.00 30.90 2.32
8488 11511 8.247562 GGCATGTGTACCTGAAAAATACAAATA 58.752 33.333 0.00 0.00 30.90 1.40
8489 11512 9.801873 GCATGTGTACCTGAAAAATACAAATAT 57.198 29.630 0.00 0.00 30.90 1.28
8503 11526 9.781834 AAAATACAAATATGTTGTATGTGTCCG 57.218 29.630 16.90 0.00 42.78 4.79
8504 11527 8.500753 AATACAAATATGTTGTATGTGTCCGT 57.499 30.769 16.90 4.77 42.78 4.69
8505 11528 6.176975 ACAAATATGTTGTATGTGTCCGTG 57.823 37.500 2.63 0.00 35.91 4.94
8506 11529 5.703592 ACAAATATGTTGTATGTGTCCGTGT 59.296 36.000 2.63 0.00 35.91 4.49
8507 11530 6.128391 ACAAATATGTTGTATGTGTCCGTGTC 60.128 38.462 2.63 0.00 35.91 3.67
8508 11531 2.892784 TGTTGTATGTGTCCGTGTCA 57.107 45.000 0.00 0.00 0.00 3.58
8509 11532 3.394674 TGTTGTATGTGTCCGTGTCAT 57.605 42.857 0.00 0.00 0.00 3.06
8510 11533 3.063485 TGTTGTATGTGTCCGTGTCATG 58.937 45.455 0.00 0.00 0.00 3.07
8511 11534 3.064207 GTTGTATGTGTCCGTGTCATGT 58.936 45.455 0.00 0.00 0.00 3.21
8512 11535 2.682836 TGTATGTGTCCGTGTCATGTG 58.317 47.619 0.00 0.00 0.00 3.21
8513 11536 2.036604 TGTATGTGTCCGTGTCATGTGT 59.963 45.455 0.00 0.00 0.00 3.72
8514 11537 1.795768 ATGTGTCCGTGTCATGTGTC 58.204 50.000 0.00 0.00 0.00 3.67
8515 11538 0.596341 TGTGTCCGTGTCATGTGTCG 60.596 55.000 0.00 0.00 0.00 4.35
8516 11539 1.663388 TGTCCGTGTCATGTGTCGC 60.663 57.895 0.00 0.00 0.00 5.19
8517 11540 2.048597 TCCGTGTCATGTGTCGCC 60.049 61.111 0.00 0.00 0.00 5.54
8518 11541 3.478394 CCGTGTCATGTGTCGCCG 61.478 66.667 0.00 0.00 0.00 6.46
8519 11542 2.733218 CGTGTCATGTGTCGCCGT 60.733 61.111 0.00 0.00 0.00 5.68
8520 11543 2.307309 CGTGTCATGTGTCGCCGTT 61.307 57.895 0.00 0.00 0.00 4.44
8521 11544 1.491563 GTGTCATGTGTCGCCGTTC 59.508 57.895 0.00 0.00 0.00 3.95
8522 11545 0.944311 GTGTCATGTGTCGCCGTTCT 60.944 55.000 0.00 0.00 0.00 3.01
8523 11546 0.666274 TGTCATGTGTCGCCGTTCTC 60.666 55.000 0.00 0.00 0.00 2.87
8524 11547 0.666274 GTCATGTGTCGCCGTTCTCA 60.666 55.000 0.00 0.00 0.00 3.27
8525 11548 0.032815 TCATGTGTCGCCGTTCTCAA 59.967 50.000 0.00 0.00 0.00 3.02
8526 11549 0.865111 CATGTGTCGCCGTTCTCAAA 59.135 50.000 0.00 0.00 0.00 2.69
8527 11550 1.464608 CATGTGTCGCCGTTCTCAAAT 59.535 47.619 0.00 0.00 0.00 2.32
8528 11551 0.865111 TGTGTCGCCGTTCTCAAATG 59.135 50.000 0.00 0.00 0.00 2.32
8529 11552 0.865769 GTGTCGCCGTTCTCAAATGT 59.134 50.000 0.00 0.00 0.00 2.71
8530 11553 0.865111 TGTCGCCGTTCTCAAATGTG 59.135 50.000 0.00 0.00 0.00 3.21
8531 11554 1.144969 GTCGCCGTTCTCAAATGTGA 58.855 50.000 0.00 0.00 0.00 3.58
8532 11555 1.529438 GTCGCCGTTCTCAAATGTGAA 59.471 47.619 0.00 0.00 31.88 3.18
8533 11556 1.798223 TCGCCGTTCTCAAATGTGAAG 59.202 47.619 0.00 0.00 31.88 3.02
8534 11557 1.798223 CGCCGTTCTCAAATGTGAAGA 59.202 47.619 0.00 0.00 31.88 2.87
8535 11558 2.159787 CGCCGTTCTCAAATGTGAAGAG 60.160 50.000 0.00 0.00 31.88 2.85
8536 11559 2.808543 GCCGTTCTCAAATGTGAAGAGT 59.191 45.455 0.00 0.00 31.88 3.24
8537 11560 3.120511 GCCGTTCTCAAATGTGAAGAGTC 60.121 47.826 0.00 0.00 31.88 3.36
8538 11561 4.058124 CCGTTCTCAAATGTGAAGAGTCA 58.942 43.478 0.00 0.00 31.88 3.41
8539 11562 4.692625 CCGTTCTCAAATGTGAAGAGTCAT 59.307 41.667 0.00 0.00 35.80 3.06
8540 11563 5.180117 CCGTTCTCAAATGTGAAGAGTCATT 59.820 40.000 0.00 0.00 35.80 2.57
8541 11564 6.302615 CGTTCTCAAATGTGAAGAGTCATTC 58.697 40.000 0.00 0.00 35.80 2.67
8542 11565 6.146837 CGTTCTCAAATGTGAAGAGTCATTCT 59.853 38.462 0.00 0.00 35.80 2.40
8543 11566 7.517321 GTTCTCAAATGTGAAGAGTCATTCTC 58.483 38.462 0.00 0.00 43.05 2.87
8544 11567 5.866092 TCTCAAATGTGAAGAGTCATTCTCG 59.134 40.000 0.00 0.00 46.86 4.04
8545 11568 5.541845 TCAAATGTGAAGAGTCATTCTCGT 58.458 37.500 0.00 0.00 46.86 4.18
8546 11569 5.406477 TCAAATGTGAAGAGTCATTCTCGTG 59.594 40.000 0.00 0.00 46.86 4.35
8547 11570 4.527509 ATGTGAAGAGTCATTCTCGTGT 57.472 40.909 0.00 0.00 46.86 4.49
8548 11571 5.644977 ATGTGAAGAGTCATTCTCGTGTA 57.355 39.130 0.00 0.00 46.86 2.90
8549 11572 5.644977 TGTGAAGAGTCATTCTCGTGTAT 57.355 39.130 0.00 0.00 46.86 2.29
8550 11573 6.753107 TGTGAAGAGTCATTCTCGTGTATA 57.247 37.500 0.00 0.00 46.86 1.47
8551 11574 6.786207 TGTGAAGAGTCATTCTCGTGTATAG 58.214 40.000 0.00 0.00 46.86 1.31
8552 11575 6.598064 TGTGAAGAGTCATTCTCGTGTATAGA 59.402 38.462 0.00 0.00 46.86 1.98
8553 11576 7.129622 GTGAAGAGTCATTCTCGTGTATAGAG 58.870 42.308 0.00 0.00 46.86 2.43
8554 11577 6.261158 TGAAGAGTCATTCTCGTGTATAGAGG 59.739 42.308 0.00 0.00 46.86 3.69
8555 11578 5.686753 AGAGTCATTCTCGTGTATAGAGGT 58.313 41.667 0.00 0.00 46.86 3.85
8556 11579 6.123651 AGAGTCATTCTCGTGTATAGAGGTT 58.876 40.000 0.00 0.00 46.86 3.50
8557 11580 6.261381 AGAGTCATTCTCGTGTATAGAGGTTC 59.739 42.308 0.00 0.00 46.86 3.62
8558 11581 6.123651 AGTCATTCTCGTGTATAGAGGTTCT 58.876 40.000 0.00 0.00 36.45 3.01
8559 11582 6.603997 AGTCATTCTCGTGTATAGAGGTTCTT 59.396 38.462 0.00 0.00 36.45 2.52
8560 11583 7.122948 AGTCATTCTCGTGTATAGAGGTTCTTT 59.877 37.037 0.00 0.00 36.45 2.52
8561 11584 7.760340 GTCATTCTCGTGTATAGAGGTTCTTTT 59.240 37.037 0.00 0.00 36.45 2.27
8562 11585 8.311836 TCATTCTCGTGTATAGAGGTTCTTTTT 58.688 33.333 0.00 0.00 36.45 1.94
8588 11611 7.329588 TCTTTCCAGAAAGTAAACTGTTTCC 57.670 36.000 17.36 0.00 45.88 3.13
8589 11612 6.320418 TCTTTCCAGAAAGTAAACTGTTTCCC 59.680 38.462 17.36 2.09 45.88 3.97
8590 11613 5.118729 TCCAGAAAGTAAACTGTTTCCCA 57.881 39.130 9.38 0.00 33.84 4.37
8591 11614 5.511363 TCCAGAAAGTAAACTGTTTCCCAA 58.489 37.500 9.38 0.00 33.84 4.12
8592 11615 5.952947 TCCAGAAAGTAAACTGTTTCCCAAA 59.047 36.000 9.38 0.00 33.84 3.28
8593 11616 6.609616 TCCAGAAAGTAAACTGTTTCCCAAAT 59.390 34.615 9.38 0.00 33.84 2.32
8594 11617 6.923508 CCAGAAAGTAAACTGTTTCCCAAATC 59.076 38.462 9.38 2.93 33.84 2.17
8595 11618 7.417342 CCAGAAAGTAAACTGTTTCCCAAATCA 60.417 37.037 9.38 0.00 33.84 2.57
8596 11619 7.435192 CAGAAAGTAAACTGTTTCCCAAATCAC 59.565 37.037 9.38 0.00 33.84 3.06
8597 11620 6.783708 AAGTAAACTGTTTCCCAAATCACA 57.216 33.333 9.38 0.00 0.00 3.58
8598 11621 6.391227 AGTAAACTGTTTCCCAAATCACAG 57.609 37.500 9.38 0.00 42.08 3.66
8601 11624 4.654091 ACTGTTTCCCAAATCACAGTTG 57.346 40.909 0.00 0.00 46.12 3.16
8602 11625 4.277476 ACTGTTTCCCAAATCACAGTTGA 58.723 39.130 0.00 0.00 46.12 3.18
8603 11626 4.097892 ACTGTTTCCCAAATCACAGTTGAC 59.902 41.667 0.00 0.00 46.12 3.18
8604 11627 3.383185 TGTTTCCCAAATCACAGTTGACC 59.617 43.478 0.00 0.00 33.38 4.02
8605 11628 3.304911 TTCCCAAATCACAGTTGACCA 57.695 42.857 0.00 0.00 33.38 4.02
8606 11629 3.304911 TCCCAAATCACAGTTGACCAA 57.695 42.857 0.00 0.00 33.38 3.67
8607 11630 3.636679 TCCCAAATCACAGTTGACCAAA 58.363 40.909 0.00 0.00 33.38 3.28
8608 11631 3.383185 TCCCAAATCACAGTTGACCAAAC 59.617 43.478 0.00 0.00 39.24 2.93
8620 11643 4.681744 GTTGACCAAACTGAAATCTTGCA 58.318 39.130 0.00 0.00 35.75 4.08
8621 11644 5.291971 GTTGACCAAACTGAAATCTTGCAT 58.708 37.500 0.00 0.00 35.75 3.96
8622 11645 5.534207 TGACCAAACTGAAATCTTGCATT 57.466 34.783 0.00 0.00 0.00 3.56
8623 11646 5.291178 TGACCAAACTGAAATCTTGCATTG 58.709 37.500 0.00 0.00 0.00 2.82
8624 11647 5.068855 TGACCAAACTGAAATCTTGCATTGA 59.931 36.000 0.00 0.00 0.00 2.57
8625 11648 5.916318 ACCAAACTGAAATCTTGCATTGAA 58.084 33.333 0.00 0.00 0.00 2.69
8626 11649 6.347696 ACCAAACTGAAATCTTGCATTGAAA 58.652 32.000 0.00 0.00 0.00 2.69
8680 11703 9.941664 CAATTCGTTGAGCATTATTTCTTCTAT 57.058 29.630 0.00 0.00 0.00 1.98
8686 11709 9.890352 GTTGAGCATTATTTCTTCTATCCAATC 57.110 33.333 0.00 0.00 0.00 2.67
8710 11733 5.434352 TCATACCGTGTTAGCTAAGCTAG 57.566 43.478 6.38 0.00 42.34 3.42
8713 11736 2.194271 CCGTGTTAGCTAAGCTAGTGC 58.806 52.381 6.38 0.00 42.34 4.40
8714 11737 2.194271 CGTGTTAGCTAAGCTAGTGCC 58.806 52.381 6.38 0.00 42.34 5.01
8793 11816 3.862845 CAGCGCACATAGTGTACACATTA 59.137 43.478 27.06 12.62 35.75 1.90
8795 11818 3.615056 GCGCACATAGTGTACACATTACA 59.385 43.478 27.06 7.63 35.75 2.41
8796 11819 4.491924 GCGCACATAGTGTACACATTACAC 60.492 45.833 27.06 11.53 45.89 2.90
8817 11845 9.705290 TTACACATACATTGATATATGCTCGTT 57.295 29.630 0.00 0.00 32.92 3.85
8831 11859 1.201812 GCTCGTTTAGTGCACATGACG 60.202 52.381 21.04 22.83 39.04 4.35
8870 11898 8.864024 CAGTTTATACAATGGATATCTAGCACG 58.136 37.037 2.05 0.00 0.00 5.34
8891 11919 1.002684 GGCGTCGATCGATAGTGTTCT 60.003 52.381 22.50 0.00 42.86 3.01
8892 11920 2.222678 GGCGTCGATCGATAGTGTTCTA 59.777 50.000 22.50 0.00 42.86 2.10
8907 11935 8.967552 ATAGTGTTCTACTAACGACTTTTGAG 57.032 34.615 0.00 0.00 44.64 3.02
8948 11976 6.656632 TTTGACCAATGTATTTAGCCACAA 57.343 33.333 0.00 0.00 0.00 3.33
8963 11991 3.596310 CCACAATTCACATTGGCATGA 57.404 42.857 0.00 0.00 43.82 3.07
8975 12003 2.183478 TGGCATGAATGAACACGTCT 57.817 45.000 0.00 0.00 0.00 4.18
8976 12004 3.326836 TGGCATGAATGAACACGTCTA 57.673 42.857 0.00 0.00 0.00 2.59
8977 12005 3.669536 TGGCATGAATGAACACGTCTAA 58.330 40.909 0.00 0.00 0.00 2.10
8978 12006 4.068599 TGGCATGAATGAACACGTCTAAA 58.931 39.130 0.00 0.00 0.00 1.85
8979 12007 4.517075 TGGCATGAATGAACACGTCTAAAA 59.483 37.500 0.00 0.00 0.00 1.52
8980 12008 5.182950 TGGCATGAATGAACACGTCTAAAAT 59.817 36.000 0.00 0.00 0.00 1.82
8981 12009 6.092748 GGCATGAATGAACACGTCTAAAATT 58.907 36.000 0.00 0.00 0.00 1.82
8982 12010 6.586082 GGCATGAATGAACACGTCTAAAATTT 59.414 34.615 0.00 0.00 0.00 1.82
8983 12011 7.116233 GGCATGAATGAACACGTCTAAAATTTT 59.884 33.333 8.75 8.75 0.00 1.82
8984 12012 9.123709 GCATGAATGAACACGTCTAAAATTTTA 57.876 29.630 10.16 10.16 0.00 1.52
8986 12014 8.702408 TGAATGAACACGTCTAAAATTTTACG 57.298 30.769 19.59 19.59 0.00 3.18
8987 12015 7.799447 TGAATGAACACGTCTAAAATTTTACGG 59.201 33.333 23.13 16.45 0.00 4.02
8988 12016 6.841443 TGAACACGTCTAAAATTTTACGGA 57.159 33.333 23.13 11.74 0.00 4.69
8989 12017 7.244166 TGAACACGTCTAAAATTTTACGGAA 57.756 32.000 23.13 7.43 0.00 4.30
8990 12018 7.863666 TGAACACGTCTAAAATTTTACGGAAT 58.136 30.769 23.13 12.51 0.00 3.01
8991 12019 8.011106 TGAACACGTCTAAAATTTTACGGAATC 58.989 33.333 23.13 18.14 0.00 2.52
8992 12020 6.527957 ACACGTCTAAAATTTTACGGAATCG 58.472 36.000 23.13 15.07 43.02 3.34
9004 12032 2.458592 CGGAATCGTGAAAGGCATTC 57.541 50.000 0.00 0.00 38.60 2.67
9005 12033 1.267532 CGGAATCGTGAAAGGCATTCG 60.268 52.381 0.00 0.00 41.18 3.34
9006 12034 1.064060 GGAATCGTGAAAGGCATTCGG 59.936 52.381 0.00 0.00 41.18 4.30
9007 12035 2.006888 GAATCGTGAAAGGCATTCGGA 58.993 47.619 0.00 0.00 41.18 4.55
9008 12036 2.332063 ATCGTGAAAGGCATTCGGAT 57.668 45.000 0.00 1.13 41.18 4.18
9009 12037 2.971660 TCGTGAAAGGCATTCGGATA 57.028 45.000 0.00 0.00 41.18 2.59
9010 12038 2.821546 TCGTGAAAGGCATTCGGATAG 58.178 47.619 0.00 0.00 41.18 2.08
9011 12039 2.429250 TCGTGAAAGGCATTCGGATAGA 59.571 45.455 0.00 0.00 41.18 1.98
9012 12040 2.540101 CGTGAAAGGCATTCGGATAGAC 59.460 50.000 0.00 0.00 41.18 2.59
9013 12041 3.531538 GTGAAAGGCATTCGGATAGACA 58.468 45.455 0.00 0.00 41.18 3.41
9014 12042 3.309954 GTGAAAGGCATTCGGATAGACAC 59.690 47.826 0.00 0.00 41.18 3.67
9015 12043 2.225068 AAGGCATTCGGATAGACACG 57.775 50.000 0.00 0.00 0.00 4.49
9016 12044 1.112113 AGGCATTCGGATAGACACGT 58.888 50.000 0.00 0.00 0.00 4.49
9017 12045 1.067212 AGGCATTCGGATAGACACGTC 59.933 52.381 0.00 0.00 0.00 4.34
9018 12046 1.202371 GGCATTCGGATAGACACGTCA 60.202 52.381 0.00 0.00 0.00 4.35
9019 12047 2.536365 GCATTCGGATAGACACGTCAA 58.464 47.619 0.00 0.00 0.00 3.18
9020 12048 3.123804 GCATTCGGATAGACACGTCAAT 58.876 45.455 0.00 0.00 0.00 2.57
9021 12049 3.555956 GCATTCGGATAGACACGTCAATT 59.444 43.478 0.00 0.00 0.00 2.32
9022 12050 4.034048 GCATTCGGATAGACACGTCAATTT 59.966 41.667 0.00 0.00 0.00 1.82
9023 12051 5.728255 CATTCGGATAGACACGTCAATTTC 58.272 41.667 0.00 0.00 0.00 2.17
9024 12052 4.713824 TCGGATAGACACGTCAATTTCT 57.286 40.909 0.00 0.00 0.00 2.52
9025 12053 4.421058 TCGGATAGACACGTCAATTTCTG 58.579 43.478 0.00 0.00 0.00 3.02
9026 12054 3.551890 CGGATAGACACGTCAATTTCTGG 59.448 47.826 0.00 0.00 0.00 3.86
9027 12055 4.504858 GGATAGACACGTCAATTTCTGGT 58.495 43.478 0.00 0.00 0.00 4.00
9028 12056 5.657474 GGATAGACACGTCAATTTCTGGTA 58.343 41.667 0.00 0.00 0.00 3.25
9029 12057 6.281405 GGATAGACACGTCAATTTCTGGTAT 58.719 40.000 0.00 0.00 0.00 2.73
9030 12058 6.201044 GGATAGACACGTCAATTTCTGGTATG 59.799 42.308 0.00 0.00 0.00 2.39
9031 12059 4.894784 AGACACGTCAATTTCTGGTATGT 58.105 39.130 0.00 0.00 0.00 2.29
9032 12060 4.929808 AGACACGTCAATTTCTGGTATGTC 59.070 41.667 0.00 0.00 33.76 3.06
9033 12061 4.000988 ACACGTCAATTTCTGGTATGTCC 58.999 43.478 0.00 0.00 0.00 4.02
9034 12062 4.000325 CACGTCAATTTCTGGTATGTCCA 59.000 43.478 0.00 0.00 45.01 4.02
9035 12063 4.000988 ACGTCAATTTCTGGTATGTCCAC 58.999 43.478 0.00 0.00 41.93 4.02
9036 12064 4.000325 CGTCAATTTCTGGTATGTCCACA 59.000 43.478 0.00 0.00 41.93 4.17
9037 12065 4.635765 CGTCAATTTCTGGTATGTCCACAT 59.364 41.667 0.00 0.00 41.93 3.21
9038 12066 5.447683 CGTCAATTTCTGGTATGTCCACATG 60.448 44.000 2.26 0.00 41.93 3.21
9039 12067 5.647658 GTCAATTTCTGGTATGTCCACATGA 59.352 40.000 0.00 0.00 41.93 3.07
9040 12068 6.150976 GTCAATTTCTGGTATGTCCACATGAA 59.849 38.462 0.00 0.00 41.93 2.57
9041 12069 6.891361 TCAATTTCTGGTATGTCCACATGAAT 59.109 34.615 0.00 0.00 41.93 2.57
9042 12070 7.396907 TCAATTTCTGGTATGTCCACATGAATT 59.603 33.333 0.00 0.00 41.93 2.17
9043 12071 6.757897 TTTCTGGTATGTCCACATGAATTC 57.242 37.500 0.00 0.00 41.93 2.17
9044 12072 4.780815 TCTGGTATGTCCACATGAATTCC 58.219 43.478 0.00 0.00 41.93 3.01
9045 12073 4.474651 TCTGGTATGTCCACATGAATTCCT 59.525 41.667 0.00 0.00 41.93 3.36
9046 12074 5.044919 TCTGGTATGTCCACATGAATTCCTT 60.045 40.000 0.00 0.00 41.93 3.36
9047 12075 5.579047 TGGTATGTCCACATGAATTCCTTT 58.421 37.500 0.00 0.00 41.93 3.11
9048 12076 6.015918 TGGTATGTCCACATGAATTCCTTTT 58.984 36.000 0.00 0.00 41.93 2.27
9049 12077 6.496565 TGGTATGTCCACATGAATTCCTTTTT 59.503 34.615 0.00 0.00 41.93 1.94
9050 12078 7.035612 GGTATGTCCACATGAATTCCTTTTTC 58.964 38.462 0.00 0.00 37.15 2.29
9051 12079 6.669125 ATGTCCACATGAATTCCTTTTTCA 57.331 33.333 0.00 0.00 37.49 2.69
9052 12080 6.669125 TGTCCACATGAATTCCTTTTTCAT 57.331 33.333 0.00 0.00 42.95 2.57
9053 12081 7.065120 TGTCCACATGAATTCCTTTTTCATT 57.935 32.000 0.00 0.00 40.84 2.57
9054 12082 7.507829 TGTCCACATGAATTCCTTTTTCATTT 58.492 30.769 0.00 0.00 40.84 2.32
9055 12083 7.992033 TGTCCACATGAATTCCTTTTTCATTTT 59.008 29.630 0.00 0.00 40.84 1.82
9056 12084 9.487790 GTCCACATGAATTCCTTTTTCATTTTA 57.512 29.630 0.00 0.00 40.84 1.52
9057 12085 9.487790 TCCACATGAATTCCTTTTTCATTTTAC 57.512 29.630 0.00 0.00 40.84 2.01
9058 12086 9.270640 CCACATGAATTCCTTTTTCATTTTACA 57.729 29.630 0.00 0.00 40.84 2.41
9061 12089 9.796062 CATGAATTCCTTTTTCATTTTACAACG 57.204 29.630 2.27 0.00 40.84 4.10
9062 12090 7.846485 TGAATTCCTTTTTCATTTTACAACGC 58.154 30.769 2.27 0.00 0.00 4.84
9063 12091 6.779115 ATTCCTTTTTCATTTTACAACGCC 57.221 33.333 0.00 0.00 0.00 5.68
9064 12092 5.523438 TCCTTTTTCATTTTACAACGCCT 57.477 34.783 0.00 0.00 0.00 5.52
9065 12093 5.525199 TCCTTTTTCATTTTACAACGCCTC 58.475 37.500 0.00 0.00 0.00 4.70
9066 12094 4.381566 CCTTTTTCATTTTACAACGCCTCG 59.618 41.667 0.00 0.00 0.00 4.63
9067 12095 4.555348 TTTTCATTTTACAACGCCTCGT 57.445 36.364 0.00 0.00 43.97 4.18
9078 12106 2.798976 ACGCCTCGTTAAGTACAACA 57.201 45.000 0.00 0.00 36.35 3.33
9079 12107 3.096489 ACGCCTCGTTAAGTACAACAA 57.904 42.857 0.00 0.00 36.35 2.83
9080 12108 3.456280 ACGCCTCGTTAAGTACAACAAA 58.544 40.909 0.00 0.00 36.35 2.83
9081 12109 3.870419 ACGCCTCGTTAAGTACAACAAAA 59.130 39.130 0.00 0.00 36.35 2.44
9082 12110 4.512571 ACGCCTCGTTAAGTACAACAAAAT 59.487 37.500 0.00 0.00 36.35 1.82
9083 12111 5.695816 ACGCCTCGTTAAGTACAACAAAATA 59.304 36.000 0.00 0.00 36.35 1.40
9084 12112 6.202570 ACGCCTCGTTAAGTACAACAAAATAA 59.797 34.615 0.00 0.00 36.35 1.40
9085 12113 7.070798 CGCCTCGTTAAGTACAACAAAATAAA 58.929 34.615 0.00 0.00 0.00 1.40
9086 12114 7.747357 CGCCTCGTTAAGTACAACAAAATAAAT 59.253 33.333 0.00 0.00 0.00 1.40
9111 12139 9.995003 ATAAATGAGCAATGTAAAACAAAAGGA 57.005 25.926 0.00 0.00 0.00 3.36
9112 12140 8.729805 AAATGAGCAATGTAAAACAAAAGGAA 57.270 26.923 0.00 0.00 0.00 3.36
9113 12141 7.951530 ATGAGCAATGTAAAACAAAAGGAAG 57.048 32.000 0.00 0.00 0.00 3.46
9114 12142 7.106439 TGAGCAATGTAAAACAAAAGGAAGA 57.894 32.000 0.00 0.00 0.00 2.87
9115 12143 7.551585 TGAGCAATGTAAAACAAAAGGAAGAA 58.448 30.769 0.00 0.00 0.00 2.52
9116 12144 7.706179 TGAGCAATGTAAAACAAAAGGAAGAAG 59.294 33.333 0.00 0.00 0.00 2.85
9117 12145 7.781056 AGCAATGTAAAACAAAAGGAAGAAGA 58.219 30.769 0.00 0.00 0.00 2.87
9118 12146 8.257306 AGCAATGTAAAACAAAAGGAAGAAGAA 58.743 29.630 0.00 0.00 0.00 2.52
9119 12147 8.878769 GCAATGTAAAACAAAAGGAAGAAGAAA 58.121 29.630 0.00 0.00 0.00 2.52
9121 12149 9.599866 AATGTAAAACAAAAGGAAGAAGAAAGG 57.400 29.630 0.00 0.00 0.00 3.11
9122 12150 8.356000 TGTAAAACAAAAGGAAGAAGAAAGGA 57.644 30.769 0.00 0.00 0.00 3.36
9123 12151 8.808092 TGTAAAACAAAAGGAAGAAGAAAGGAA 58.192 29.630 0.00 0.00 0.00 3.36
9124 12152 9.817809 GTAAAACAAAAGGAAGAAGAAAGGAAT 57.182 29.630 0.00 0.00 0.00 3.01
9126 12154 9.739276 AAAACAAAAGGAAGAAGAAAGGAATTT 57.261 25.926 0.00 0.00 0.00 1.82
9127 12155 8.948631 AACAAAAGGAAGAAGAAAGGAATTTC 57.051 30.769 0.00 0.00 0.00 2.17
9128 12156 8.311395 ACAAAAGGAAGAAGAAAGGAATTTCT 57.689 30.769 0.00 0.00 42.62 2.52
9163 12191 2.436417 TGAAAGGAATTCAGGCTTCCG 58.564 47.619 7.93 0.00 45.63 4.30
9164 12192 2.224769 TGAAAGGAATTCAGGCTTCCGT 60.225 45.455 7.93 0.00 45.63 4.69
9165 12193 2.586648 AAGGAATTCAGGCTTCCGTT 57.413 45.000 7.93 0.00 45.63 4.44
9166 12194 2.115343 AGGAATTCAGGCTTCCGTTC 57.885 50.000 7.93 0.00 45.63 3.95
9167 12195 1.630878 AGGAATTCAGGCTTCCGTTCT 59.369 47.619 7.93 0.00 45.63 3.01
9168 12196 2.040412 AGGAATTCAGGCTTCCGTTCTT 59.960 45.455 7.93 0.00 45.63 2.52
9169 12197 3.263425 AGGAATTCAGGCTTCCGTTCTTA 59.737 43.478 7.93 0.00 45.63 2.10
9170 12198 4.080299 AGGAATTCAGGCTTCCGTTCTTAT 60.080 41.667 7.93 0.00 45.63 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.086696 CTAAGCCACCGTGTCCATTG 58.913 55.000 0.00 0.00 0.00 2.82
58 1713 3.984200 GACACGCGTCCTGGTAGGC 62.984 68.421 9.86 0.00 36.02 3.93
83 1738 0.112995 TTTCCCTGCAGAGCCAACAT 59.887 50.000 17.39 0.00 0.00 2.71
158 1814 5.450550 GGAAGTGTGGACTTTCCTTTTTCTG 60.451 44.000 0.00 0.00 42.80 3.02
159 1815 4.645136 GGAAGTGTGGACTTTCCTTTTTCT 59.355 41.667 0.00 0.00 42.80 2.52
175 1832 4.437682 TGAGGATTCAAGTTGGAAGTGT 57.562 40.909 2.34 0.00 0.00 3.55
209 1866 4.403976 GCCGAAGTTCGAGGCTAG 57.596 61.111 26.37 9.53 46.83 3.42
212 1869 1.228657 ACTTTGCCGAAGTTCGAGGC 61.229 55.000 26.37 20.90 46.34 4.70
288 1945 1.005097 GTTATTCCACCCCCTCCGTTT 59.995 52.381 0.00 0.00 0.00 3.60
289 1946 0.622136 GTTATTCCACCCCCTCCGTT 59.378 55.000 0.00 0.00 0.00 4.44
299 1956 5.064707 ACATTGTCTACGCATGTTATTCCAC 59.935 40.000 0.00 0.00 0.00 4.02
313 1970 9.522804 TTTTGTTTTCCACATAACATTGTCTAC 57.477 29.630 0.00 0.00 34.43 2.59
328 1985 7.417003 GGCTAGACTTAAAGGTTTTGTTTTCCA 60.417 37.037 0.00 0.00 0.00 3.53
386 2043 5.349817 GTCACTGAGTTCCTACATTGATGTG 59.650 44.000 6.87 0.00 41.89 3.21
388 2045 5.728471 AGTCACTGAGTTCCTACATTGATG 58.272 41.667 0.00 0.00 30.87 3.07
451 2111 5.531287 ACCTTCTTTTCCTCACAATGTGTAC 59.469 40.000 13.55 0.00 34.79 2.90
490 2150 9.829507 ACATTTGTATTTGACCAATCTTTCAAA 57.170 25.926 0.00 0.00 43.89 2.69
491 2151 9.829507 AACATTTGTATTTGACCAATCTTTCAA 57.170 25.926 0.00 0.00 0.00 2.69
537 2305 1.349627 CACACATCCTTCGCATCGC 59.650 57.895 0.00 0.00 0.00 4.58
538 2306 1.349627 GCACACATCCTTCGCATCG 59.650 57.895 0.00 0.00 0.00 3.84
539 2307 1.349627 CGCACACATCCTTCGCATC 59.650 57.895 0.00 0.00 0.00 3.91
540 2308 1.375908 ACGCACACATCCTTCGCAT 60.376 52.632 0.00 0.00 0.00 4.73
542 2310 2.317609 ACACGCACACATCCTTCGC 61.318 57.895 0.00 0.00 0.00 4.70
543 2311 1.221466 ACACACGCACACATCCTTCG 61.221 55.000 0.00 0.00 0.00 3.79
544 2312 0.235665 CACACACGCACACATCCTTC 59.764 55.000 0.00 0.00 0.00 3.46
546 2314 1.146041 ACACACACGCACACATCCT 59.854 52.632 0.00 0.00 0.00 3.24
547 2315 1.279539 CACACACACGCACACATCC 59.720 57.895 0.00 0.00 0.00 3.51
548 2316 0.316114 CACACACACACGCACACATC 60.316 55.000 0.00 0.00 0.00 3.06
549 2317 1.024046 ACACACACACACGCACACAT 61.024 50.000 0.00 0.00 0.00 3.21
550 2318 1.669437 ACACACACACACGCACACA 60.669 52.632 0.00 0.00 0.00 3.72
551 2319 1.225991 CACACACACACACGCACAC 60.226 57.895 0.00 0.00 0.00 3.82
552 2320 1.357991 CTCACACACACACACGCACA 61.358 55.000 0.00 0.00 0.00 4.57
553 2321 1.348250 CTCACACACACACACGCAC 59.652 57.895 0.00 0.00 0.00 5.34
554 2322 1.813337 CCTCACACACACACACGCA 60.813 57.895 0.00 0.00 0.00 5.24
555 2323 1.087202 TTCCTCACACACACACACGC 61.087 55.000 0.00 0.00 0.00 5.34
556 2324 1.327460 CTTTCCTCACACACACACACG 59.673 52.381 0.00 0.00 0.00 4.49
557 2325 1.064060 GCTTTCCTCACACACACACAC 59.936 52.381 0.00 0.00 0.00 3.82
558 2326 1.378531 GCTTTCCTCACACACACACA 58.621 50.000 0.00 0.00 0.00 3.72
657 2952 0.537188 GATGAGGAGAGCGGTTGGAA 59.463 55.000 0.00 0.00 0.00 3.53
1230 3859 2.464459 CGACAGCCCAATCGAAGCC 61.464 63.158 0.00 0.00 40.86 4.35
1234 3863 2.180769 CGTCGACAGCCCAATCGA 59.819 61.111 17.16 0.00 44.68 3.59
1235 3864 3.554692 GCGTCGACAGCCCAATCG 61.555 66.667 17.16 0.00 39.72 3.34
1281 3915 1.603739 GGACCACAGGGAAGCAACC 60.604 63.158 0.00 0.00 38.05 3.77
1283 3917 2.429930 CGGACCACAGGGAAGCAA 59.570 61.111 0.00 0.00 38.05 3.91
1286 3920 0.392998 CAATCCGGACCACAGGGAAG 60.393 60.000 6.12 0.00 38.05 3.46
1288 3922 0.620410 ATCAATCCGGACCACAGGGA 60.620 55.000 6.12 0.00 38.05 4.20
1292 3926 3.451793 CGAATCAATCCGGACCACA 57.548 52.632 6.12 0.00 0.00 4.17
1298 3932 2.546795 CCTCTTCTCCGAATCAATCCGG 60.547 54.545 0.00 0.00 46.57 5.14
1300 3934 3.493524 GGTCCTCTTCTCCGAATCAATCC 60.494 52.174 0.00 0.00 0.00 3.01
1369 4016 1.549170 GAGAAGGAGGCCAACTACGAA 59.451 52.381 5.01 0.00 34.15 3.85
1401 4049 1.402259 TCAACACGGCGAAAAACATGT 59.598 42.857 16.62 1.74 0.00 3.21
1402 4050 1.778591 GTCAACACGGCGAAAAACATG 59.221 47.619 16.62 0.95 0.00 3.21
1438 4087 1.377725 CGCCATTGAGCAACTCCCT 60.378 57.895 0.00 0.00 0.00 4.20
1439 4088 2.409870 CCGCCATTGAGCAACTCCC 61.410 63.158 0.00 0.00 0.00 4.30
1440 4089 0.960364 TTCCGCCATTGAGCAACTCC 60.960 55.000 0.00 0.00 0.00 3.85
1441 4090 0.449388 CTTCCGCCATTGAGCAACTC 59.551 55.000 0.00 0.00 0.00 3.01
1442 4091 0.036732 TCTTCCGCCATTGAGCAACT 59.963 50.000 0.00 0.00 0.00 3.16
1444 4093 0.677731 CCTCTTCCGCCATTGAGCAA 60.678 55.000 0.00 0.00 0.00 3.91
1445 4094 1.078214 CCTCTTCCGCCATTGAGCA 60.078 57.895 0.00 0.00 0.00 4.26
1446 4095 1.821332 CCCTCTTCCGCCATTGAGC 60.821 63.158 0.00 0.00 0.00 4.26
1447 4096 1.153086 CCCCTCTTCCGCCATTGAG 60.153 63.158 0.00 0.00 0.00 3.02
1448 4097 1.615124 TCCCCTCTTCCGCCATTGA 60.615 57.895 0.00 0.00 0.00 2.57
1449 4098 1.452108 GTCCCCTCTTCCGCCATTG 60.452 63.158 0.00 0.00 0.00 2.82
1450 4099 1.915078 CTGTCCCCTCTTCCGCCATT 61.915 60.000 0.00 0.00 0.00 3.16
1451 4100 2.285368 TGTCCCCTCTTCCGCCAT 60.285 61.111 0.00 0.00 0.00 4.40
1452 4101 3.003173 CTGTCCCCTCTTCCGCCA 61.003 66.667 0.00 0.00 0.00 5.69
1453 4102 3.787001 CCTGTCCCCTCTTCCGCC 61.787 72.222 0.00 0.00 0.00 6.13
1454 4103 2.683933 TCCTGTCCCCTCTTCCGC 60.684 66.667 0.00 0.00 0.00 5.54
1455 4104 0.978146 ATGTCCTGTCCCCTCTTCCG 60.978 60.000 0.00 0.00 0.00 4.30
1456 4105 0.543749 CATGTCCTGTCCCCTCTTCC 59.456 60.000 0.00 0.00 0.00 3.46
1457 4106 0.107459 GCATGTCCTGTCCCCTCTTC 60.107 60.000 0.00 0.00 0.00 2.87
1458 4107 1.903877 CGCATGTCCTGTCCCCTCTT 61.904 60.000 0.00 0.00 0.00 2.85
1471 4123 1.973281 CAGGGCAGAAACCGCATGT 60.973 57.895 0.00 0.00 0.00 3.21
1486 4138 0.329261 TCAAATCCCTGGACAGCAGG 59.671 55.000 0.00 0.00 39.48 4.85
1539 4193 8.721019 AATCTGATGTGATCTCTCTCTTTTTC 57.279 34.615 0.00 0.00 0.00 2.29
1573 4227 4.151867 GTGCTGTTGGTACTTTACTACTGC 59.848 45.833 0.00 0.00 37.93 4.40
1574 4228 4.384846 CGTGCTGTTGGTACTTTACTACTG 59.615 45.833 0.00 0.00 0.00 2.74
1582 4245 1.540363 CCAGTCGTGCTGTTGGTACTT 60.540 52.381 8.43 0.00 43.55 2.24
1585 4248 1.369692 CCCAGTCGTGCTGTTGGTA 59.630 57.895 8.43 0.00 43.55 3.25
1622 4285 1.008538 GGGTTTGTGAGCACGCTTG 60.009 57.895 0.00 0.00 0.00 4.01
1623 4286 1.152963 AGGGTTTGTGAGCACGCTT 60.153 52.632 0.00 0.00 32.55 4.68
1624 4287 1.893808 CAGGGTTTGTGAGCACGCT 60.894 57.895 0.00 0.00 36.67 5.07
1637 4300 3.170717 TCAACGAGGAATACTTCAGGGT 58.829 45.455 0.00 0.00 0.00 4.34
1687 4350 1.901654 TACGCCGCCAAGTTGGGTAT 61.902 55.000 23.36 3.33 38.19 2.73
1692 4355 0.802494 AAATCTACGCCGCCAAGTTG 59.198 50.000 0.00 0.00 0.00 3.16
2955 5933 6.283544 TCCATGTGATGTGCAAATTTATGT 57.716 33.333 0.00 0.00 0.00 2.29
2958 5936 8.095792 AGAAAATCCATGTGATGTGCAAATTTA 58.904 29.630 0.00 0.00 32.68 1.40
3018 5996 7.264373 TCTGAAAGAAGAACAAGATTTCACC 57.736 36.000 0.00 0.00 42.31 4.02
3185 6163 3.583526 AGGAGGACAAAAGAAGTAGGTCC 59.416 47.826 0.00 0.00 46.54 4.46
3190 6168 5.367945 ACAACAGGAGGACAAAAGAAGTA 57.632 39.130 0.00 0.00 0.00 2.24
3322 6300 5.425217 TCCTGGTTCTTCTCAGCAATACATA 59.575 40.000 0.00 0.00 0.00 2.29
3836 6814 1.833630 TCCCTGATGCGTCTCAAATCT 59.166 47.619 7.58 0.00 0.00 2.40
4172 7150 2.928801 TTGTACCACAGTGTGCAGAT 57.071 45.000 18.21 5.38 32.39 2.90
4845 7823 6.128007 CGGTCCTTTGCATTAACACTTCTAAT 60.128 38.462 0.00 0.00 0.00 1.73
4900 7878 1.123861 AGGCTCCTCTGAGTGCAACA 61.124 55.000 17.41 0.00 41.43 3.33
5264 8242 2.031516 CCTGCGTCAAGAGCACAGG 61.032 63.158 0.00 0.00 41.78 4.00
5498 8477 6.969993 GGCCCAACCTGAAATAATAATACA 57.030 37.500 0.00 0.00 34.51 2.29
5585 8564 0.325577 TCTCCCAGCTACCAGCATCA 60.326 55.000 0.38 0.00 45.56 3.07
5688 8667 0.105039 GGTGCTACGGAGAGGAATGG 59.895 60.000 0.00 0.00 0.00 3.16
5710 8689 8.576442 TCAATAAAGGGAACAAAAAGAAGCTAG 58.424 33.333 0.00 0.00 0.00 3.42
6044 9026 5.122869 TCTCAGCATTAGAGTCATTTGTTGC 59.877 40.000 0.00 0.00 34.73 4.17
6214 9196 1.946081 TCAAGATGCGACACAAAAGCA 59.054 42.857 0.00 0.00 45.46 3.91
6319 9304 5.186797 CCCTGGAACATTGTTTGGCTATTTA 59.813 40.000 3.08 0.00 38.20 1.40
6613 9598 4.202430 GGAAACTCAGGTGGAAGGTAGAAA 60.202 45.833 0.00 0.00 0.00 2.52
6689 9674 6.968335 GGCTCACTTAAAACGTAAACTGAAAA 59.032 34.615 0.00 0.00 0.00 2.29
6730 9715 2.568956 AGTTGAAGGCAGTATCAGCAGA 59.431 45.455 0.00 0.00 30.19 4.26
6869 9854 0.393537 CATTCCCTCTGCCAGTCCAC 60.394 60.000 0.00 0.00 0.00 4.02
6959 9944 3.010420 AGCTTCGTTGAAATAGGGCTTC 58.990 45.455 0.00 0.00 0.00 3.86
6974 9959 3.103447 TGCTTCTCATATCCAGCTTCG 57.897 47.619 0.00 0.00 33.15 3.79
7107 10092 0.939443 TATCAAGAGGGGGAGGGGGA 60.939 60.000 0.00 0.00 0.00 4.81
7131 10116 0.599558 ACAGCATGACACCAATGCAC 59.400 50.000 10.69 0.00 43.25 4.57
7146 10131 8.201554 TGATTCATGAACTACTTAATGACAGC 57.798 34.615 11.07 0.00 0.00 4.40
7163 10148 4.000331 AGATTAGCCCGACTGATTCATG 58.000 45.455 0.00 0.00 0.00 3.07
7166 10151 5.119694 AGAAAAGATTAGCCCGACTGATTC 58.880 41.667 0.00 0.00 0.00 2.52
7168 10153 4.762289 AGAAAAGATTAGCCCGACTGAT 57.238 40.909 0.00 0.00 0.00 2.90
7173 10158 6.938507 TGTTACTAAGAAAAGATTAGCCCGA 58.061 36.000 0.00 0.00 34.25 5.14
7402 10392 5.106594 CCATTTTAAATCAAAAGGCTGCCAC 60.107 40.000 22.65 0.00 39.44 5.01
7408 10398 6.934083 TGGAGTTCCATTTTAAATCAAAAGGC 59.066 34.615 0.00 0.00 42.01 4.35
7567 10560 4.761739 ACAAAATCCTCGAAATTCTGCAGA 59.238 37.500 13.74 13.74 0.00 4.26
7845 10841 1.120530 ATACAACCCTCGGCTCGATT 58.879 50.000 0.00 0.00 34.61 3.34
7847 10843 0.458669 GAATACAACCCTCGGCTCGA 59.541 55.000 0.00 0.00 0.00 4.04
7875 10871 2.517959 TCATGTTTTCTCAAGCCAGGG 58.482 47.619 0.00 0.00 0.00 4.45
7877 10873 7.373493 AGTTTTATCATGTTTTCTCAAGCCAG 58.627 34.615 0.00 0.00 0.00 4.85
7911 10908 6.656314 TGTACATTTATACGGAAACAGCAG 57.344 37.500 0.00 0.00 0.00 4.24
7912 10909 7.334671 TGAATGTACATTTATACGGAAACAGCA 59.665 33.333 21.63 7.51 0.00 4.41
8092 11100 4.336433 GCTTAATCTTGCAATGCTGGTCTA 59.664 41.667 6.82 0.00 0.00 2.59
8129 11137 2.176273 GCCAGCTGCATCTGTACCG 61.176 63.158 15.94 2.37 40.77 4.02
8134 11142 4.906065 TTATTTTAGCCAGCTGCATCTG 57.094 40.909 8.66 10.65 44.83 2.90
8152 11160 5.009010 CGCTGGAGAAAAATGCCACTATTAT 59.991 40.000 0.00 0.00 0.00 1.28
8153 11161 4.335315 CGCTGGAGAAAAATGCCACTATTA 59.665 41.667 0.00 0.00 0.00 0.98
8155 11163 2.684881 CGCTGGAGAAAAATGCCACTAT 59.315 45.455 0.00 0.00 0.00 2.12
8156 11164 2.083774 CGCTGGAGAAAAATGCCACTA 58.916 47.619 0.00 0.00 0.00 2.74
8158 11166 0.109132 CCGCTGGAGAAAAATGCCAC 60.109 55.000 0.00 0.00 0.00 5.01
8168 11176 1.005394 GAAAACGGACCGCTGGAGA 60.005 57.895 15.39 0.00 0.00 3.71
8171 11179 0.596082 AAATGAAAACGGACCGCTGG 59.404 50.000 15.39 0.00 0.00 4.85
8374 11396 7.534239 GCTTTACCGAAGTCAAACTTTATGAAG 59.466 37.037 0.00 0.00 38.80 3.02
8375 11397 7.227910 AGCTTTACCGAAGTCAAACTTTATGAA 59.772 33.333 0.00 0.00 38.80 2.57
8376 11398 6.708949 AGCTTTACCGAAGTCAAACTTTATGA 59.291 34.615 0.00 0.00 38.80 2.15
8377 11399 6.899114 AGCTTTACCGAAGTCAAACTTTATG 58.101 36.000 0.00 0.00 38.80 1.90
8378 11400 8.611654 TTAGCTTTACCGAAGTCAAACTTTAT 57.388 30.769 0.00 0.00 38.80 1.40
8379 11401 8.611654 ATTAGCTTTACCGAAGTCAAACTTTA 57.388 30.769 0.00 0.00 38.80 1.85
8380 11402 6.930667 TTAGCTTTACCGAAGTCAAACTTT 57.069 33.333 0.00 0.00 38.80 2.66
8381 11403 8.665685 CATATTAGCTTTACCGAAGTCAAACTT 58.334 33.333 0.00 0.00 41.95 2.66
8382 11404 7.201617 GCATATTAGCTTTACCGAAGTCAAACT 60.202 37.037 0.00 0.00 37.69 2.66
8383 11405 6.905609 GCATATTAGCTTTACCGAAGTCAAAC 59.094 38.462 0.00 0.00 37.69 2.93
8384 11406 6.821665 AGCATATTAGCTTTACCGAAGTCAAA 59.178 34.615 0.00 0.00 43.70 2.69
8385 11407 6.257849 CAGCATATTAGCTTTACCGAAGTCAA 59.742 38.462 0.00 0.00 43.70 3.18
8386 11408 5.753438 CAGCATATTAGCTTTACCGAAGTCA 59.247 40.000 0.00 0.00 43.70 3.41
8387 11409 5.983720 TCAGCATATTAGCTTTACCGAAGTC 59.016 40.000 0.00 0.00 43.70 3.01
8388 11410 5.914033 TCAGCATATTAGCTTTACCGAAGT 58.086 37.500 0.00 0.00 43.70 3.01
8389 11411 5.986135 ACTCAGCATATTAGCTTTACCGAAG 59.014 40.000 0.00 0.00 43.70 3.79
8390 11412 5.914033 ACTCAGCATATTAGCTTTACCGAA 58.086 37.500 0.00 0.00 43.70 4.30
8391 11413 5.531122 ACTCAGCATATTAGCTTTACCGA 57.469 39.130 0.00 0.00 43.70 4.69
8392 11414 7.438459 AGTTTACTCAGCATATTAGCTTTACCG 59.562 37.037 0.00 0.00 43.70 4.02
8393 11415 8.664211 AGTTTACTCAGCATATTAGCTTTACC 57.336 34.615 0.00 0.00 43.70 2.85
8395 11417 9.884636 TGAAGTTTACTCAGCATATTAGCTTTA 57.115 29.630 0.00 0.00 43.70 1.85
8396 11418 8.792830 TGAAGTTTACTCAGCATATTAGCTTT 57.207 30.769 0.00 0.00 43.70 3.51
8397 11419 8.970859 ATGAAGTTTACTCAGCATATTAGCTT 57.029 30.769 0.00 0.00 43.70 3.74
8423 11445 9.668497 GGAGGTATACTTATGAAGTCAAACTTT 57.332 33.333 2.25 0.00 38.80 2.66
8424 11446 8.822805 TGGAGGTATACTTATGAAGTCAAACTT 58.177 33.333 2.25 0.00 41.95 2.66
8425 11447 8.375493 TGGAGGTATACTTATGAAGTCAAACT 57.625 34.615 2.25 0.00 41.77 2.66
8426 11448 9.444600 TTTGGAGGTATACTTATGAAGTCAAAC 57.555 33.333 2.25 0.00 41.77 2.93
8427 11449 9.667107 CTTTGGAGGTATACTTATGAAGTCAAA 57.333 33.333 2.25 0.00 41.77 2.69
8428 11450 9.042450 TCTTTGGAGGTATACTTATGAAGTCAA 57.958 33.333 2.25 0.00 41.77 3.18
8429 11451 8.603898 TCTTTGGAGGTATACTTATGAAGTCA 57.396 34.615 2.25 0.00 41.77 3.41
8433 11455 9.944376 GCATATCTTTGGAGGTATACTTATGAA 57.056 33.333 2.25 0.00 28.02 2.57
8434 11456 8.540388 GGCATATCTTTGGAGGTATACTTATGA 58.460 37.037 2.25 0.00 28.02 2.15
8435 11457 8.543774 AGGCATATCTTTGGAGGTATACTTATG 58.456 37.037 2.25 0.00 28.02 1.90
8436 11458 8.543774 CAGGCATATCTTTGGAGGTATACTTAT 58.456 37.037 2.25 0.00 28.02 1.73
8437 11459 7.038302 CCAGGCATATCTTTGGAGGTATACTTA 60.038 40.741 2.25 0.00 32.34 2.24
8438 11460 6.240002 CCAGGCATATCTTTGGAGGTATACTT 60.240 42.308 2.25 0.00 32.34 2.24
8439 11461 5.249393 CCAGGCATATCTTTGGAGGTATACT 59.751 44.000 2.25 0.00 32.34 2.12
8440 11462 5.491982 CCAGGCATATCTTTGGAGGTATAC 58.508 45.833 0.00 0.00 32.34 1.47
8441 11463 4.019321 GCCAGGCATATCTTTGGAGGTATA 60.019 45.833 6.55 0.00 32.34 1.47
8442 11464 3.245052 GCCAGGCATATCTTTGGAGGTAT 60.245 47.826 6.55 0.00 32.34 2.73
8485 11508 5.483811 TGACACGGACACATACAACATATT 58.516 37.500 0.00 0.00 0.00 1.28
8486 11509 5.079689 TGACACGGACACATACAACATAT 57.920 39.130 0.00 0.00 0.00 1.78
8487 11510 4.522722 TGACACGGACACATACAACATA 57.477 40.909 0.00 0.00 0.00 2.29
8488 11511 3.394674 TGACACGGACACATACAACAT 57.605 42.857 0.00 0.00 0.00 2.71
8489 11512 2.892784 TGACACGGACACATACAACA 57.107 45.000 0.00 0.00 0.00 3.33
8491 11514 3.063485 CACATGACACGGACACATACAA 58.937 45.455 0.00 0.00 0.00 2.41
8492 11515 2.036604 ACACATGACACGGACACATACA 59.963 45.455 0.00 0.00 0.00 2.29
8493 11516 2.666508 GACACATGACACGGACACATAC 59.333 50.000 0.00 0.00 0.00 2.39
8494 11517 2.669950 CGACACATGACACGGACACATA 60.670 50.000 0.00 0.00 0.00 2.29
8495 11518 1.795768 GACACATGACACGGACACAT 58.204 50.000 0.00 0.00 0.00 3.21
8496 11519 0.596341 CGACACATGACACGGACACA 60.596 55.000 0.00 0.00 0.00 3.72
8497 11520 1.886861 GCGACACATGACACGGACAC 61.887 60.000 0.00 0.00 0.00 3.67
8498 11521 1.663388 GCGACACATGACACGGACA 60.663 57.895 0.00 0.00 0.00 4.02
8499 11522 2.380410 GGCGACACATGACACGGAC 61.380 63.158 0.00 0.00 0.00 4.79
8500 11523 2.048597 GGCGACACATGACACGGA 60.049 61.111 0.00 0.00 0.00 4.69
8501 11524 3.478394 CGGCGACACATGACACGG 61.478 66.667 0.00 0.00 0.00 4.94
8503 11526 0.944311 AGAACGGCGACACATGACAC 60.944 55.000 16.62 0.00 0.00 3.67
8504 11527 0.666274 GAGAACGGCGACACATGACA 60.666 55.000 16.62 0.00 0.00 3.58
8505 11528 0.666274 TGAGAACGGCGACACATGAC 60.666 55.000 16.62 0.00 0.00 3.06
8506 11529 0.032815 TTGAGAACGGCGACACATGA 59.967 50.000 16.62 0.00 0.00 3.07
8507 11530 0.865111 TTTGAGAACGGCGACACATG 59.135 50.000 16.62 0.00 0.00 3.21
8508 11531 1.464608 CATTTGAGAACGGCGACACAT 59.535 47.619 16.62 4.08 0.00 3.21
8509 11532 0.865111 CATTTGAGAACGGCGACACA 59.135 50.000 16.62 9.36 0.00 3.72
8510 11533 0.865769 ACATTTGAGAACGGCGACAC 59.134 50.000 16.62 6.62 0.00 3.67
8511 11534 0.865111 CACATTTGAGAACGGCGACA 59.135 50.000 16.62 5.28 0.00 4.35
8512 11535 1.144969 TCACATTTGAGAACGGCGAC 58.855 50.000 16.62 7.38 0.00 5.19
8513 11536 1.798223 CTTCACATTTGAGAACGGCGA 59.202 47.619 16.62 0.00 31.71 5.54
8514 11537 1.798223 TCTTCACATTTGAGAACGGCG 59.202 47.619 4.80 4.80 31.71 6.46
8515 11538 2.808543 ACTCTTCACATTTGAGAACGGC 59.191 45.455 0.00 0.00 31.71 5.68
8516 11539 4.058124 TGACTCTTCACATTTGAGAACGG 58.942 43.478 0.00 0.00 31.71 4.44
8517 11540 5.852738 ATGACTCTTCACATTTGAGAACG 57.147 39.130 0.00 0.00 33.38 3.95
8518 11541 7.432350 AGAATGACTCTTCACATTTGAGAAC 57.568 36.000 0.00 0.00 36.94 3.01
8519 11542 6.367149 CGAGAATGACTCTTCACATTTGAGAA 59.633 38.462 0.00 0.00 42.92 2.87
8520 11543 5.866092 CGAGAATGACTCTTCACATTTGAGA 59.134 40.000 0.00 0.00 42.92 3.27
8521 11544 5.636965 ACGAGAATGACTCTTCACATTTGAG 59.363 40.000 0.00 0.00 42.92 3.02
8522 11545 5.406477 CACGAGAATGACTCTTCACATTTGA 59.594 40.000 0.00 0.00 42.92 2.69
8523 11546 5.178252 ACACGAGAATGACTCTTCACATTTG 59.822 40.000 0.00 0.00 42.92 2.32
8524 11547 5.300752 ACACGAGAATGACTCTTCACATTT 58.699 37.500 0.00 0.00 42.92 2.32
8525 11548 4.887748 ACACGAGAATGACTCTTCACATT 58.112 39.130 0.00 0.00 42.92 2.71
8526 11549 4.527509 ACACGAGAATGACTCTTCACAT 57.472 40.909 0.00 0.00 42.92 3.21
8527 11550 5.644977 ATACACGAGAATGACTCTTCACA 57.355 39.130 0.00 0.00 42.92 3.58
8528 11551 7.017498 TCTATACACGAGAATGACTCTTCAC 57.983 40.000 0.00 0.00 42.92 3.18
8529 11552 6.261158 CCTCTATACACGAGAATGACTCTTCA 59.739 42.308 0.00 0.00 42.92 3.02
8530 11553 6.261381 ACCTCTATACACGAGAATGACTCTTC 59.739 42.308 0.00 0.00 42.92 2.87
8531 11554 6.123651 ACCTCTATACACGAGAATGACTCTT 58.876 40.000 0.00 0.00 42.92 2.85
8532 11555 5.686753 ACCTCTATACACGAGAATGACTCT 58.313 41.667 0.00 0.00 42.92 3.24
8533 11556 6.261381 AGAACCTCTATACACGAGAATGACTC 59.739 42.308 0.00 0.00 41.79 3.36
8534 11557 6.123651 AGAACCTCTATACACGAGAATGACT 58.876 40.000 0.00 0.00 0.00 3.41
8535 11558 6.380095 AGAACCTCTATACACGAGAATGAC 57.620 41.667 0.00 0.00 0.00 3.06
8536 11559 7.406031 AAAGAACCTCTATACACGAGAATGA 57.594 36.000 0.00 0.00 0.00 2.57
8537 11560 8.480643 AAAAAGAACCTCTATACACGAGAATG 57.519 34.615 0.00 0.00 0.00 2.67
8566 11589 5.952947 TGGGAAACAGTTTACTTTCTGGAAA 59.047 36.000 8.22 0.00 36.17 3.13
8567 11590 5.511363 TGGGAAACAGTTTACTTTCTGGAA 58.489 37.500 8.22 0.00 36.17 3.53
8568 11591 5.118729 TGGGAAACAGTTTACTTTCTGGA 57.881 39.130 8.22 0.00 36.17 3.86
8569 11592 5.845391 TTGGGAAACAGTTTACTTTCTGG 57.155 39.130 8.22 0.00 36.17 3.86
8570 11593 7.435192 GTGATTTGGGAAACAGTTTACTTTCTG 59.565 37.037 8.22 0.00 37.65 3.02
8571 11594 7.123547 TGTGATTTGGGAAACAGTTTACTTTCT 59.876 33.333 8.22 0.00 0.00 2.52
8572 11595 7.262048 TGTGATTTGGGAAACAGTTTACTTTC 58.738 34.615 8.22 1.80 0.00 2.62
8573 11596 7.176589 TGTGATTTGGGAAACAGTTTACTTT 57.823 32.000 8.22 0.00 0.00 2.66
8574 11597 6.783708 TGTGATTTGGGAAACAGTTTACTT 57.216 33.333 8.22 0.00 0.00 2.24
8575 11598 6.391227 CTGTGATTTGGGAAACAGTTTACT 57.609 37.500 8.22 0.00 36.20 2.24
8581 11604 4.499696 GGTCAACTGTGATTTGGGAAACAG 60.500 45.833 0.00 0.00 44.46 3.16
8582 11605 3.383185 GGTCAACTGTGATTTGGGAAACA 59.617 43.478 0.00 0.00 35.80 2.83
8583 11606 3.383185 TGGTCAACTGTGATTTGGGAAAC 59.617 43.478 0.00 0.00 35.80 2.78
8584 11607 3.636679 TGGTCAACTGTGATTTGGGAAA 58.363 40.909 0.00 0.00 35.80 3.13
8585 11608 3.304911 TGGTCAACTGTGATTTGGGAA 57.695 42.857 0.00 0.00 35.80 3.97
8586 11609 3.304911 TTGGTCAACTGTGATTTGGGA 57.695 42.857 0.00 0.00 35.80 4.37
8587 11610 3.384467 AGTTTGGTCAACTGTGATTTGGG 59.616 43.478 0.00 0.00 44.70 4.12
8588 11611 4.654091 AGTTTGGTCAACTGTGATTTGG 57.346 40.909 0.00 0.00 44.70 3.28
8598 11621 4.681744 TGCAAGATTTCAGTTTGGTCAAC 58.318 39.130 0.00 0.00 35.32 3.18
8599 11622 4.998671 TGCAAGATTTCAGTTTGGTCAA 57.001 36.364 0.00 0.00 0.00 3.18
8600 11623 5.068855 TCAATGCAAGATTTCAGTTTGGTCA 59.931 36.000 0.00 0.00 0.00 4.02
8601 11624 5.531634 TCAATGCAAGATTTCAGTTTGGTC 58.468 37.500 0.00 0.00 0.00 4.02
8602 11625 5.534207 TCAATGCAAGATTTCAGTTTGGT 57.466 34.783 0.00 0.00 0.00 3.67
8603 11626 6.480981 AGTTTCAATGCAAGATTTCAGTTTGG 59.519 34.615 0.00 0.00 0.00 3.28
8604 11627 7.473027 AGTTTCAATGCAAGATTTCAGTTTG 57.527 32.000 0.00 0.00 0.00 2.93
8605 11628 7.225341 GGAAGTTTCAATGCAAGATTTCAGTTT 59.775 33.333 0.00 0.00 0.00 2.66
8606 11629 6.703165 GGAAGTTTCAATGCAAGATTTCAGTT 59.297 34.615 0.00 0.00 0.00 3.16
8607 11630 6.218746 GGAAGTTTCAATGCAAGATTTCAGT 58.781 36.000 0.00 0.00 0.00 3.41
8608 11631 5.636543 GGGAAGTTTCAATGCAAGATTTCAG 59.363 40.000 0.00 0.00 0.00 3.02
8609 11632 5.305128 AGGGAAGTTTCAATGCAAGATTTCA 59.695 36.000 0.00 0.00 0.00 2.69
8610 11633 5.787380 AGGGAAGTTTCAATGCAAGATTTC 58.213 37.500 0.00 0.00 0.00 2.17
8611 11634 5.813513 AGGGAAGTTTCAATGCAAGATTT 57.186 34.783 0.00 0.00 0.00 2.17
8612 11635 5.813513 AAGGGAAGTTTCAATGCAAGATT 57.186 34.783 0.00 0.00 0.00 2.40
8613 11636 6.570378 CGTTAAGGGAAGTTTCAATGCAAGAT 60.570 38.462 0.00 0.00 0.00 2.40
8614 11637 5.278266 CGTTAAGGGAAGTTTCAATGCAAGA 60.278 40.000 0.00 0.00 0.00 3.02
8615 11638 4.917415 CGTTAAGGGAAGTTTCAATGCAAG 59.083 41.667 0.00 0.00 0.00 4.01
8616 11639 4.794655 GCGTTAAGGGAAGTTTCAATGCAA 60.795 41.667 0.00 0.00 0.00 4.08
8617 11640 3.305064 GCGTTAAGGGAAGTTTCAATGCA 60.305 43.478 0.00 0.00 0.00 3.96
8618 11641 3.057526 AGCGTTAAGGGAAGTTTCAATGC 60.058 43.478 0.00 0.00 0.00 3.56
8619 11642 4.766404 AGCGTTAAGGGAAGTTTCAATG 57.234 40.909 0.00 0.00 0.00 2.82
8620 11643 4.825085 TCAAGCGTTAAGGGAAGTTTCAAT 59.175 37.500 0.00 0.00 0.00 2.57
8621 11644 4.200874 TCAAGCGTTAAGGGAAGTTTCAA 58.799 39.130 0.00 0.00 0.00 2.69
8622 11645 3.811083 TCAAGCGTTAAGGGAAGTTTCA 58.189 40.909 0.00 0.00 0.00 2.69
8623 11646 4.823790 TTCAAGCGTTAAGGGAAGTTTC 57.176 40.909 0.00 0.00 0.00 2.78
8624 11647 4.202080 GGTTTCAAGCGTTAAGGGAAGTTT 60.202 41.667 0.00 0.00 0.00 2.66
8625 11648 3.317149 GGTTTCAAGCGTTAAGGGAAGTT 59.683 43.478 0.00 0.00 0.00 2.66
8626 11649 2.882761 GGTTTCAAGCGTTAAGGGAAGT 59.117 45.455 0.00 0.00 0.00 3.01
8680 11703 4.161565 AGCTAACACGGTATGAAGATTGGA 59.838 41.667 0.00 0.00 0.00 3.53
8686 11709 4.683832 AGCTTAGCTAACACGGTATGAAG 58.316 43.478 4.30 0.00 36.99 3.02
8713 11736 8.926180 GTACGCTCGTATTGCAAATATGCTGG 62.926 46.154 1.71 0.00 41.82 4.85
8714 11737 6.109908 GTACGCTCGTATTGCAAATATGCTG 61.110 44.000 1.71 4.59 41.82 4.41
8733 11756 0.810031 CCTACCTGTGCCATGTACGC 60.810 60.000 0.00 0.00 0.00 4.42
8775 11798 6.662414 ATGTGTAATGTGTACACTATGTGC 57.338 37.500 25.60 12.81 45.77 4.57
8793 11816 8.607441 AAACGAGCATATATCAATGTATGTGT 57.393 30.769 8.09 3.55 35.21 3.72
8795 11818 9.929180 ACTAAACGAGCATATATCAATGTATGT 57.071 29.630 8.09 0.00 35.21 2.29
8798 11821 7.870445 TGCACTAAACGAGCATATATCAATGTA 59.130 33.333 0.00 0.00 34.20 2.29
8803 11831 5.596845 TGTGCACTAAACGAGCATATATCA 58.403 37.500 19.41 0.00 41.23 2.15
8808 11836 3.616821 GTCATGTGCACTAAACGAGCATA 59.383 43.478 19.41 0.00 41.23 3.14
8817 11845 4.373527 ACAACTAACGTCATGTGCACTAA 58.626 39.130 19.41 0.00 0.00 2.24
8870 11898 0.030369 AACACTATCGATCGACGCCC 59.970 55.000 22.06 0.00 42.26 6.13
8882 11910 8.027771 CCTCAAAAGTCGTTAGTAGAACACTAT 58.972 37.037 0.00 0.00 39.51 2.12
8923 11951 7.946381 TGTGGCTAAATACATTGGTCAAATA 57.054 32.000 0.00 0.00 35.76 1.40
8928 11956 6.751888 GTGAATTGTGGCTAAATACATTGGTC 59.248 38.462 0.00 0.00 0.00 4.02
8948 11976 5.172934 GTGTTCATTCATGCCAATGTGAAT 58.827 37.500 6.93 0.00 43.75 2.57
8963 11991 7.863666 TCCGTAAAATTTTAGACGTGTTCATT 58.136 30.769 19.49 0.00 0.00 2.57
8985 12013 1.267532 CGAATGCCTTTCACGATTCCG 60.268 52.381 0.00 0.00 42.50 4.30
8986 12014 1.064060 CCGAATGCCTTTCACGATTCC 59.936 52.381 0.00 0.00 33.66 3.01
8987 12015 2.006888 TCCGAATGCCTTTCACGATTC 58.993 47.619 0.00 0.00 33.66 2.52
8988 12016 2.107950 TCCGAATGCCTTTCACGATT 57.892 45.000 0.00 0.00 33.66 3.34
8989 12017 2.332063 ATCCGAATGCCTTTCACGAT 57.668 45.000 0.00 0.00 33.66 3.73
8990 12018 2.429250 TCTATCCGAATGCCTTTCACGA 59.571 45.455 0.00 0.00 33.66 4.35
8991 12019 2.540101 GTCTATCCGAATGCCTTTCACG 59.460 50.000 0.00 0.00 33.66 4.35
8992 12020 3.309954 GTGTCTATCCGAATGCCTTTCAC 59.690 47.826 0.00 0.00 33.66 3.18
8993 12021 3.531538 GTGTCTATCCGAATGCCTTTCA 58.468 45.455 0.00 0.00 33.66 2.69
8994 12022 2.540101 CGTGTCTATCCGAATGCCTTTC 59.460 50.000 0.00 0.00 0.00 2.62
8995 12023 2.093658 ACGTGTCTATCCGAATGCCTTT 60.094 45.455 0.00 0.00 0.00 3.11
8996 12024 1.480954 ACGTGTCTATCCGAATGCCTT 59.519 47.619 0.00 0.00 0.00 4.35
8997 12025 1.067212 GACGTGTCTATCCGAATGCCT 59.933 52.381 0.00 0.00 0.00 4.75
8998 12026 1.202371 TGACGTGTCTATCCGAATGCC 60.202 52.381 0.00 0.00 0.00 4.40
8999 12027 2.203800 TGACGTGTCTATCCGAATGC 57.796 50.000 0.00 0.00 0.00 3.56
9000 12028 5.520288 AGAAATTGACGTGTCTATCCGAATG 59.480 40.000 0.00 0.00 0.00 2.67
9001 12029 5.520288 CAGAAATTGACGTGTCTATCCGAAT 59.480 40.000 0.00 0.00 0.00 3.34
9002 12030 4.862574 CAGAAATTGACGTGTCTATCCGAA 59.137 41.667 0.00 0.00 0.00 4.30
9003 12031 4.421058 CAGAAATTGACGTGTCTATCCGA 58.579 43.478 0.00 0.00 0.00 4.55
9004 12032 3.551890 CCAGAAATTGACGTGTCTATCCG 59.448 47.826 0.00 0.00 0.00 4.18
9005 12033 4.504858 ACCAGAAATTGACGTGTCTATCC 58.495 43.478 0.00 0.00 0.00 2.59
9006 12034 6.757010 ACATACCAGAAATTGACGTGTCTATC 59.243 38.462 0.00 0.00 0.00 2.08
9007 12035 6.640518 ACATACCAGAAATTGACGTGTCTAT 58.359 36.000 0.00 0.00 0.00 1.98
9008 12036 6.032956 ACATACCAGAAATTGACGTGTCTA 57.967 37.500 0.00 0.00 0.00 2.59
9009 12037 4.894784 ACATACCAGAAATTGACGTGTCT 58.105 39.130 0.00 0.00 0.00 3.41
9010 12038 4.092968 GGACATACCAGAAATTGACGTGTC 59.907 45.833 0.00 0.00 38.79 3.67
9011 12039 4.000988 GGACATACCAGAAATTGACGTGT 58.999 43.478 0.00 0.00 38.79 4.49
9012 12040 4.000325 TGGACATACCAGAAATTGACGTG 59.000 43.478 0.00 0.00 44.64 4.49
9013 12041 4.280436 TGGACATACCAGAAATTGACGT 57.720 40.909 0.00 0.00 44.64 4.34
9025 12053 6.530019 AAAAGGAATTCATGTGGACATACC 57.470 37.500 7.93 0.00 34.26 2.73
9026 12054 7.601856 TGAAAAAGGAATTCATGTGGACATAC 58.398 34.615 7.93 0.00 34.26 2.39
9027 12055 7.773489 TGAAAAAGGAATTCATGTGGACATA 57.227 32.000 7.93 0.00 34.26 2.29
9028 12056 6.669125 TGAAAAAGGAATTCATGTGGACAT 57.331 33.333 7.93 0.00 36.96 3.06
9029 12057 6.669125 ATGAAAAAGGAATTCATGTGGACA 57.331 33.333 7.93 0.00 43.85 4.02
9030 12058 7.967890 AAATGAAAAAGGAATTCATGTGGAC 57.032 32.000 7.93 0.00 44.53 4.02
9031 12059 9.487790 GTAAAATGAAAAAGGAATTCATGTGGA 57.512 29.630 7.93 0.00 44.53 4.02
9032 12060 9.270640 TGTAAAATGAAAAAGGAATTCATGTGG 57.729 29.630 7.93 0.00 44.53 4.17
9035 12063 9.796062 CGTTGTAAAATGAAAAAGGAATTCATG 57.204 29.630 7.93 0.00 44.53 3.07
9036 12064 8.495148 GCGTTGTAAAATGAAAAAGGAATTCAT 58.505 29.630 7.93 0.00 46.62 2.57
9037 12065 7.042389 GGCGTTGTAAAATGAAAAAGGAATTCA 60.042 33.333 7.93 0.00 40.76 2.57
9038 12066 7.170828 AGGCGTTGTAAAATGAAAAAGGAATTC 59.829 33.333 0.00 0.00 0.00 2.17
9039 12067 6.989759 AGGCGTTGTAAAATGAAAAAGGAATT 59.010 30.769 0.00 0.00 0.00 2.17
9040 12068 6.521162 AGGCGTTGTAAAATGAAAAAGGAAT 58.479 32.000 0.00 0.00 0.00 3.01
9041 12069 5.908341 AGGCGTTGTAAAATGAAAAAGGAA 58.092 33.333 0.00 0.00 0.00 3.36
9042 12070 5.523438 AGGCGTTGTAAAATGAAAAAGGA 57.477 34.783 0.00 0.00 0.00 3.36
9043 12071 4.381566 CGAGGCGTTGTAAAATGAAAAAGG 59.618 41.667 0.00 0.00 0.00 3.11
9044 12072 4.973663 ACGAGGCGTTGTAAAATGAAAAAG 59.026 37.500 0.00 0.00 36.35 2.27
9045 12073 4.922719 ACGAGGCGTTGTAAAATGAAAAA 58.077 34.783 0.00 0.00 36.35 1.94
9046 12074 4.555348 ACGAGGCGTTGTAAAATGAAAA 57.445 36.364 0.00 0.00 36.35 2.29
9059 12087 2.798976 TGTTGTACTTAACGAGGCGT 57.201 45.000 0.00 0.00 43.97 5.68
9060 12088 4.455917 TTTTGTTGTACTTAACGAGGCG 57.544 40.909 0.00 0.00 33.28 5.52
9061 12089 8.959734 ATTTATTTTGTTGTACTTAACGAGGC 57.040 30.769 0.00 0.00 33.28 4.70
9085 12113 9.995003 TCCTTTTGTTTTACATTGCTCATTTAT 57.005 25.926 0.00 0.00 0.00 1.40
9086 12114 9.823647 TTCCTTTTGTTTTACATTGCTCATTTA 57.176 25.926 0.00 0.00 0.00 1.40
9087 12115 8.729805 TTCCTTTTGTTTTACATTGCTCATTT 57.270 26.923 0.00 0.00 0.00 2.32
9088 12116 8.203485 TCTTCCTTTTGTTTTACATTGCTCATT 58.797 29.630 0.00 0.00 0.00 2.57
9089 12117 7.725251 TCTTCCTTTTGTTTTACATTGCTCAT 58.275 30.769 0.00 0.00 0.00 2.90
9090 12118 7.106439 TCTTCCTTTTGTTTTACATTGCTCA 57.894 32.000 0.00 0.00 0.00 4.26
9091 12119 7.920682 TCTTCTTCCTTTTGTTTTACATTGCTC 59.079 33.333 0.00 0.00 0.00 4.26
9092 12120 7.781056 TCTTCTTCCTTTTGTTTTACATTGCT 58.219 30.769 0.00 0.00 0.00 3.91
9093 12121 8.419076 TTCTTCTTCCTTTTGTTTTACATTGC 57.581 30.769 0.00 0.00 0.00 3.56
9095 12123 9.599866 CCTTTCTTCTTCCTTTTGTTTTACATT 57.400 29.630 0.00 0.00 0.00 2.71
9096 12124 8.977412 TCCTTTCTTCTTCCTTTTGTTTTACAT 58.023 29.630 0.00 0.00 0.00 2.29
9097 12125 8.356000 TCCTTTCTTCTTCCTTTTGTTTTACA 57.644 30.769 0.00 0.00 0.00 2.41
9098 12126 9.817809 ATTCCTTTCTTCTTCCTTTTGTTTTAC 57.182 29.630 0.00 0.00 0.00 2.01
9100 12128 9.739276 AAATTCCTTTCTTCTTCCTTTTGTTTT 57.261 25.926 0.00 0.00 0.00 2.43
9101 12129 9.383519 GAAATTCCTTTCTTCTTCCTTTTGTTT 57.616 29.630 0.00 0.00 38.19 2.83
9102 12130 8.948631 GAAATTCCTTTCTTCTTCCTTTTGTT 57.051 30.769 0.00 0.00 38.19 2.83
9131 12159 9.632638 CCTGAATTCCTTTCATCTTTATTCCTA 57.367 33.333 2.27 0.00 43.30 2.94
9132 12160 7.069208 GCCTGAATTCCTTTCATCTTTATTCCT 59.931 37.037 2.27 0.00 43.30 3.36
9133 12161 7.069208 AGCCTGAATTCCTTTCATCTTTATTCC 59.931 37.037 2.27 0.00 43.30 3.01
9134 12162 8.005192 AGCCTGAATTCCTTTCATCTTTATTC 57.995 34.615 2.27 0.00 43.30 1.75
9135 12163 7.968014 AGCCTGAATTCCTTTCATCTTTATT 57.032 32.000 2.27 0.00 43.30 1.40
9136 12164 7.069208 GGAAGCCTGAATTCCTTTCATCTTTAT 59.931 37.037 2.27 0.00 43.30 1.40
9137 12165 6.378280 GGAAGCCTGAATTCCTTTCATCTTTA 59.622 38.462 2.27 0.00 43.30 1.85
9138 12166 5.186603 GGAAGCCTGAATTCCTTTCATCTTT 59.813 40.000 2.27 0.00 43.30 2.52
9139 12167 4.708909 GGAAGCCTGAATTCCTTTCATCTT 59.291 41.667 2.27 0.00 43.30 2.40
9140 12168 4.276642 GGAAGCCTGAATTCCTTTCATCT 58.723 43.478 2.27 0.00 43.30 2.90
9141 12169 3.065925 CGGAAGCCTGAATTCCTTTCATC 59.934 47.826 2.27 0.00 43.30 2.92
9142 12170 3.019564 CGGAAGCCTGAATTCCTTTCAT 58.980 45.455 2.27 0.00 43.30 2.57
9143 12171 2.224769 ACGGAAGCCTGAATTCCTTTCA 60.225 45.455 2.27 0.00 43.45 2.69
9144 12172 2.437413 ACGGAAGCCTGAATTCCTTTC 58.563 47.619 2.27 0.00 43.45 2.62
9145 12173 2.586648 ACGGAAGCCTGAATTCCTTT 57.413 45.000 2.27 0.00 43.45 3.11
9146 12174 2.040412 AGAACGGAAGCCTGAATTCCTT 59.960 45.455 2.27 0.00 43.45 3.36
9147 12175 1.630878 AGAACGGAAGCCTGAATTCCT 59.369 47.619 2.27 0.00 43.45 3.36
9148 12176 2.115343 AGAACGGAAGCCTGAATTCC 57.885 50.000 2.27 0.00 42.41 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.