Multiple sequence alignment - TraesCS3D01G023600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G023600 chr3D 100.000 6611 0 0 1 6611 7502581 7495971 0.000000e+00 12209.0
1 TraesCS3D01G023600 chr3D 81.212 165 21 7 3957 4114 544603484 544603323 2.500000e-24 124.0
2 TraesCS3D01G023600 chr3D 76.652 227 44 7 3895 4114 544604467 544604691 4.190000e-22 117.0
3 TraesCS3D01G023600 chr3D 89.247 93 7 3 4024 4114 544663225 544663316 5.420000e-21 113.0
4 TraesCS3D01G023600 chr3B 91.611 2098 118 19 4139 6184 9570005 9567914 0.000000e+00 2846.0
5 TraesCS3D01G023600 chr3B 92.917 1906 80 22 795 2680 9573190 9571320 0.000000e+00 2721.0
6 TraesCS3D01G023600 chr3B 93.023 516 22 7 361 873 9574523 9574019 0.000000e+00 741.0
7 TraesCS3D01G023600 chr3B 90.625 352 26 5 6162 6508 9567895 9567546 1.680000e-125 460.0
8 TraesCS3D01G023600 chr3B 82.961 358 51 9 2 351 245978078 245978433 1.380000e-81 315.0
9 TraesCS3D01G023600 chr3B 93.860 114 4 1 6497 6610 9523474 9523364 1.140000e-37 169.0
10 TraesCS3D01G023600 chr3B 91.379 58 2 2 2697 2751 9570128 9570071 7.110000e-10 76.8
11 TraesCS3D01G023600 chr1A 82.712 1394 186 30 2753 4114 38580966 38579596 0.000000e+00 1188.0
12 TraesCS3D01G023600 chr1A 82.294 1395 189 31 2753 4114 38634503 38633134 0.000000e+00 1155.0
13 TraesCS3D01G023600 chr1A 80.836 1388 215 36 2753 4114 366294377 366295739 0.000000e+00 1042.0
14 TraesCS3D01G023600 chr1A 83.889 360 50 4 12 364 266018033 266018391 2.950000e-88 337.0
15 TraesCS3D01G023600 chr1A 83.851 161 20 5 3959 4114 38580803 38580962 1.490000e-31 148.0
16 TraesCS3D01G023600 chr1A 83.230 161 21 5 3959 4114 38634340 38634499 6.910000e-30 143.0
17 TraesCS3D01G023600 chr5A 82.568 1394 188 28 2753 4114 425494261 425495631 0.000000e+00 1177.0
18 TraesCS3D01G023600 chr5A 81.621 1431 197 46 4227 5623 554189745 554188347 0.000000e+00 1125.0
19 TraesCS3D01G023600 chr5A 80.229 1396 222 37 2753 4122 476413081 476411714 0.000000e+00 1000.0
20 TraesCS3D01G023600 chr5A 77.684 1425 235 48 4230 5614 554054746 554053365 0.000000e+00 793.0
21 TraesCS3D01G023600 chr5A 74.564 1604 329 55 1009 2569 554191838 554190271 4.350000e-176 628.0
22 TraesCS3D01G023600 chr5A 75.651 1306 254 43 4261 5521 554236073 554234787 5.710000e-165 592.0
23 TraesCS3D01G023600 chr5A 76.464 939 180 30 4265 5188 554228743 554227831 7.760000e-129 472.0
24 TraesCS3D01G023600 chr5A 72.959 1531 339 53 1073 2561 554056786 554055289 1.300000e-126 464.0
25 TraesCS3D01G023600 chr5A 84.987 373 45 6 2 363 317103221 317103593 1.050000e-97 368.0
26 TraesCS3D01G023600 chr5A 71.885 1252 268 59 1044 2244 554238418 554237200 1.090000e-72 285.0
27 TraesCS3D01G023600 chr5A 82.379 227 36 3 5302 5528 553537851 553537629 1.880000e-45 195.0
28 TraesCS3D01G023600 chr5A 82.174 230 36 4 5301 5529 554200136 554199911 6.770000e-45 193.0
29 TraesCS3D01G023600 chr5A 73.482 313 70 11 1955 2262 554184105 554183801 9.070000e-19 106.0
30 TraesCS3D01G023600 chr1B 82.484 1393 182 29 2753 4114 574256322 574254961 0.000000e+00 1164.0
31 TraesCS3D01G023600 chr1B 83.924 367 52 4 2 361 582524302 582524668 1.760000e-90 344.0
32 TraesCS3D01G023600 chr1B 83.651 367 45 7 2 361 173135028 173135386 1.370000e-86 331.0
33 TraesCS3D01G023600 chr1B 80.838 167 24 6 3954 4114 554242654 554242818 2.500000e-24 124.0
34 TraesCS3D01G023600 chr7A 82.716 1377 171 35 2753 4097 666486027 666487368 0.000000e+00 1162.0
35 TraesCS3D01G023600 chr2A 82.125 1393 194 29 2754 4114 617729690 617728321 0.000000e+00 1142.0
36 TraesCS3D01G023600 chr2A 82.274 818 124 14 2855 3664 544291217 544292021 0.000000e+00 688.0
37 TraesCS3D01G023600 chr2A 77.522 1041 189 37 4230 5248 14721158 14720141 9.550000e-163 584.0
38 TraesCS3D01G023600 chr2A 74.671 1291 268 44 1009 2262 14714357 14713089 9.830000e-143 518.0
39 TraesCS3D01G023600 chr2A 73.846 1300 262 58 1067 2324 52766375 52765112 4.700000e-121 446.0
40 TraesCS3D01G023600 chr3A 81.877 1396 194 32 2753 4114 707720635 707722005 0.000000e+00 1122.0
41 TraesCS3D01G023600 chr3A 81.877 1396 194 31 2753 4114 707811225 707812595 0.000000e+00 1122.0
42 TraesCS3D01G023600 chr3A 81.805 1396 195 31 2753 4114 707653221 707654591 0.000000e+00 1116.0
43 TraesCS3D01G023600 chr3A 81.720 1395 197 30 2753 4114 707750453 707751822 0.000000e+00 1110.0
44 TraesCS3D01G023600 chr3A 81.688 1398 193 40 2753 4114 707899033 707900403 0.000000e+00 1105.0
45 TraesCS3D01G023600 chr3A 81.375 1396 201 35 2753 4114 707687455 707688825 0.000000e+00 1083.0
46 TraesCS3D01G023600 chr6D 81.734 1396 192 30 2753 4114 186789744 186788378 0.000000e+00 1107.0
47 TraesCS3D01G023600 chr6D 74.695 328 66 15 6195 6511 94279774 94279453 5.380000e-26 130.0
48 TraesCS3D01G023600 chr6D 78.125 160 31 3 3959 4114 186789581 186789740 1.520000e-16 99.0
49 TraesCS3D01G023600 chr5D 81.272 1431 203 42 4227 5621 438574906 438573505 0.000000e+00 1098.0
50 TraesCS3D01G023600 chr5D 77.382 1375 237 43 4235 5570 438443312 438441973 0.000000e+00 749.0
51 TraesCS3D01G023600 chr5D 78.647 1035 188 22 4230 5248 438438753 438437736 0.000000e+00 656.0
52 TraesCS3D01G023600 chr5D 78.119 1010 181 30 4246 5241 438605115 438604132 7.330000e-169 604.0
53 TraesCS3D01G023600 chr5D 74.055 1588 330 57 1009 2550 438576663 438575112 5.750000e-160 575.0
54 TraesCS3D01G023600 chr5D 77.470 1012 192 27 4252 5251 438558983 438557996 2.070000e-159 573.0
55 TraesCS3D01G023600 chr5D 77.655 998 186 26 4261 5239 438722275 438721296 2.070000e-159 573.0
56 TraesCS3D01G023600 chr5D 77.019 1040 189 33 4230 5248 438589576 438588566 9.690000e-153 551.0
57 TraesCS3D01G023600 chr5D 77.295 1013 178 38 4256 5249 438545076 438544097 3.480000e-152 549.0
58 TraesCS3D01G023600 chr5D 74.615 1300 257 56 4276 5520 437867257 437868538 7.650000e-139 505.0
59 TraesCS3D01G023600 chr5D 76.158 1015 185 39 4255 5248 438569372 438568394 1.290000e-131 481.0
60 TraesCS3D01G023600 chr5D 75.610 1025 217 20 4237 5248 438521488 438520484 1.670000e-130 477.0
61 TraesCS3D01G023600 chr5D 86.757 370 40 5 2 363 446263569 446263937 2.870000e-108 403.0
62 TraesCS3D01G023600 chr5D 86.740 362 40 4 2 356 491292425 491292065 4.800000e-106 396.0
63 TraesCS3D01G023600 chr5D 82.379 227 36 3 5302 5528 438454055 438453833 1.880000e-45 195.0
64 TraesCS3D01G023600 chr5D 77.926 299 57 8 5303 5598 438624086 438623794 1.890000e-40 178.0
65 TraesCS3D01G023600 chr5D 81.928 166 24 4 3954 4114 174464025 174464189 1.160000e-27 135.0
66 TraesCS3D01G023600 chr5D 72.789 441 78 28 1841 2253 438659916 438659490 1.950000e-20 111.0
67 TraesCS3D01G023600 chr5B 81.387 1327 195 30 4230 5527 533479046 533477743 0.000000e+00 1035.0
68 TraesCS3D01G023600 chr5B 77.577 1164 225 30 4478 5620 533383502 533382354 0.000000e+00 671.0
69 TraesCS3D01G023600 chr5B 78.448 1044 184 29 4230 5248 533035383 533034356 1.550000e-180 643.0
70 TraesCS3D01G023600 chr5B 78.085 1013 189 28 4246 5248 533509195 533508206 1.580000e-170 610.0
71 TraesCS3D01G023600 chr5B 75.707 1309 246 49 4261 5521 533572968 533571684 2.050000e-164 590.0
72 TraesCS3D01G023600 chr5B 76.848 1028 207 19 4239 5245 533376562 533375545 9.690000e-153 551.0
73 TraesCS3D01G023600 chr5B 76.581 1012 207 26 4248 5240 533515290 533514290 4.540000e-146 529.0
74 TraesCS3D01G023600 chr5B 74.152 1327 299 34 1022 2324 533381541 533380235 1.640000e-140 510.0
75 TraesCS3D01G023600 chr5B 76.083 1016 180 47 4255 5248 533451282 533450308 7.760000e-129 472.0
76 TraesCS3D01G023600 chr5B 73.793 1263 274 38 1050 2279 532548092 532549330 4.700000e-121 446.0
77 TraesCS3D01G023600 chr5B 73.214 1288 257 57 1067 2307 531814450 531815696 2.890000e-103 387.0
78 TraesCS3D01G023600 chr5B 72.386 1358 280 67 1016 2320 532237249 532238564 6.350000e-90 342.0
79 TraesCS3D01G023600 chr5B 78.600 500 82 21 1015 1500 533567850 533567362 2.320000e-79 307.0
80 TraesCS3D01G023600 chr5B 79.655 290 49 8 5303 5589 533088009 533087727 4.040000e-47 200.0
81 TraesCS3D01G023600 chr5B 80.503 159 25 4 3961 4114 602261691 602261534 4.190000e-22 117.0
82 TraesCS3D01G023600 chr4A 87.143 630 67 6 2752 3381 580508210 580507595 0.000000e+00 702.0
83 TraesCS3D01G023600 chrUn 77.323 1076 210 25 4477 5528 63291661 63290596 7.330000e-169 604.0
84 TraesCS3D01G023600 chrUn 74.542 1202 257 33 1009 2181 63289898 63288717 4.640000e-131 479.0
85 TraesCS3D01G023600 chrUn 74.542 1202 257 33 1009 2181 299953066 299951885 4.640000e-131 479.0
86 TraesCS3D01G023600 chrUn 80.427 562 89 15 3563 4114 434912806 434913356 6.170000e-110 409.0
87 TraesCS3D01G023600 chrUn 80.036 561 92 14 3563 4114 435053739 435054288 1.340000e-106 398.0
88 TraesCS3D01G023600 chrUn 79.085 306 58 5 5310 5612 345138291 345137989 8.690000e-49 206.0
89 TraesCS3D01G023600 chr2D 77.714 1041 185 38 4230 5248 12632484 12631469 1.590000e-165 593.0
90 TraesCS3D01G023600 chr2D 73.991 1288 282 37 1009 2262 12634698 12633430 2.160000e-129 473.0
91 TraesCS3D01G023600 chr2D 87.425 334 34 4 2 328 496331832 496331500 1.740000e-100 377.0
92 TraesCS3D01G023600 chr2B 74.771 1308 277 33 1006 2279 20143791 20145079 7.540000e-149 538.0
93 TraesCS3D01G023600 chr2B 85.095 369 44 6 2 363 405268569 405268933 3.770000e-97 366.0
94 TraesCS3D01G023600 chr6A 79.288 787 120 22 3343 4114 18928946 18929704 1.640000e-140 510.0
95 TraesCS3D01G023600 chr6B 80.585 376 62 7 3116 3485 523882785 523883155 5.050000e-71 279.0
96 TraesCS3D01G023600 chr6B 72.755 323 73 14 6195 6507 179034551 179034868 1.960000e-15 95.3
97 TraesCS3D01G023600 chr4B 78.528 163 28 6 3957 4114 543865310 543865150 4.220000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G023600 chr3D 7495971 7502581 6610 True 12209.000000 12209 100.000000 1 6611 1 chr3D.!!$R1 6610
1 TraesCS3D01G023600 chr3B 9567546 9574523 6977 True 1368.960000 2846 91.911000 361 6508 5 chr3B.!!$R2 6147
2 TraesCS3D01G023600 chr1A 38579596 38580966 1370 True 1188.000000 1188 82.712000 2753 4114 1 chr1A.!!$R1 1361
3 TraesCS3D01G023600 chr1A 38633134 38634503 1369 True 1155.000000 1155 82.294000 2753 4114 1 chr1A.!!$R2 1361
4 TraesCS3D01G023600 chr1A 366294377 366295739 1362 False 1042.000000 1042 80.836000 2753 4114 1 chr1A.!!$F4 1361
5 TraesCS3D01G023600 chr5A 425494261 425495631 1370 False 1177.000000 1177 82.568000 2753 4114 1 chr5A.!!$F2 1361
6 TraesCS3D01G023600 chr5A 476411714 476413081 1367 True 1000.000000 1000 80.229000 2753 4122 1 chr5A.!!$R1 1369
7 TraesCS3D01G023600 chr5A 554188347 554191838 3491 True 876.500000 1125 78.092500 1009 5623 2 chr5A.!!$R7 4614
8 TraesCS3D01G023600 chr5A 554053365 554056786 3421 True 628.500000 793 75.321500 1073 5614 2 chr5A.!!$R6 4541
9 TraesCS3D01G023600 chr5A 554227831 554228743 912 True 472.000000 472 76.464000 4265 5188 1 chr5A.!!$R5 923
10 TraesCS3D01G023600 chr5A 554234787 554238418 3631 True 438.500000 592 73.768000 1044 5521 2 chr5A.!!$R8 4477
11 TraesCS3D01G023600 chr1B 574254961 574256322 1361 True 1164.000000 1164 82.484000 2753 4114 1 chr1B.!!$R1 1361
12 TraesCS3D01G023600 chr7A 666486027 666487368 1341 False 1162.000000 1162 82.716000 2753 4097 1 chr7A.!!$F1 1344
13 TraesCS3D01G023600 chr2A 617728321 617729690 1369 True 1142.000000 1142 82.125000 2754 4114 1 chr2A.!!$R4 1360
14 TraesCS3D01G023600 chr2A 544291217 544292021 804 False 688.000000 688 82.274000 2855 3664 1 chr2A.!!$F1 809
15 TraesCS3D01G023600 chr2A 14720141 14721158 1017 True 584.000000 584 77.522000 4230 5248 1 chr2A.!!$R2 1018
16 TraesCS3D01G023600 chr2A 14713089 14714357 1268 True 518.000000 518 74.671000 1009 2262 1 chr2A.!!$R1 1253
17 TraesCS3D01G023600 chr2A 52765112 52766375 1263 True 446.000000 446 73.846000 1067 2324 1 chr2A.!!$R3 1257
18 TraesCS3D01G023600 chr3A 707720635 707722005 1370 False 1122.000000 1122 81.877000 2753 4114 1 chr3A.!!$F3 1361
19 TraesCS3D01G023600 chr3A 707811225 707812595 1370 False 1122.000000 1122 81.877000 2753 4114 1 chr3A.!!$F5 1361
20 TraesCS3D01G023600 chr3A 707653221 707654591 1370 False 1116.000000 1116 81.805000 2753 4114 1 chr3A.!!$F1 1361
21 TraesCS3D01G023600 chr3A 707750453 707751822 1369 False 1110.000000 1110 81.720000 2753 4114 1 chr3A.!!$F4 1361
22 TraesCS3D01G023600 chr3A 707899033 707900403 1370 False 1105.000000 1105 81.688000 2753 4114 1 chr3A.!!$F6 1361
23 TraesCS3D01G023600 chr3A 707687455 707688825 1370 False 1083.000000 1083 81.375000 2753 4114 1 chr3A.!!$F2 1361
24 TraesCS3D01G023600 chr6D 186788378 186789744 1366 True 1107.000000 1107 81.734000 2753 4114 1 chr6D.!!$R2 1361
25 TraesCS3D01G023600 chr5D 438573505 438576663 3158 True 836.500000 1098 77.663500 1009 5621 2 chr5D.!!$R13 4612
26 TraesCS3D01G023600 chr5D 438437736 438443312 5576 True 702.500000 749 78.014500 4230 5570 2 chr5D.!!$R12 1340
27 TraesCS3D01G023600 chr5D 438604132 438605115 983 True 604.000000 604 78.119000 4246 5241 1 chr5D.!!$R7 995
28 TraesCS3D01G023600 chr5D 438557996 438558983 987 True 573.000000 573 77.470000 4252 5251 1 chr5D.!!$R4 999
29 TraesCS3D01G023600 chr5D 438721296 438722275 979 True 573.000000 573 77.655000 4261 5239 1 chr5D.!!$R10 978
30 TraesCS3D01G023600 chr5D 438588566 438589576 1010 True 551.000000 551 77.019000 4230 5248 1 chr5D.!!$R6 1018
31 TraesCS3D01G023600 chr5D 438544097 438545076 979 True 549.000000 549 77.295000 4256 5249 1 chr5D.!!$R3 993
32 TraesCS3D01G023600 chr5D 437867257 437868538 1281 False 505.000000 505 74.615000 4276 5520 1 chr5D.!!$F2 1244
33 TraesCS3D01G023600 chr5D 438568394 438569372 978 True 481.000000 481 76.158000 4255 5248 1 chr5D.!!$R5 993
34 TraesCS3D01G023600 chr5D 438520484 438521488 1004 True 477.000000 477 75.610000 4237 5248 1 chr5D.!!$R2 1011
35 TraesCS3D01G023600 chr5B 533477743 533479046 1303 True 1035.000000 1035 81.387000 4230 5527 1 chr5B.!!$R4 1297
36 TraesCS3D01G023600 chr5B 533034356 533035383 1027 True 643.000000 643 78.448000 4230 5248 1 chr5B.!!$R1 1018
37 TraesCS3D01G023600 chr5B 533508206 533509195 989 True 610.000000 610 78.085000 4246 5248 1 chr5B.!!$R5 1002
38 TraesCS3D01G023600 chr5B 533375545 533383502 7957 True 577.333333 671 76.192333 1022 5620 3 chr5B.!!$R8 4598
39 TraesCS3D01G023600 chr5B 533514290 533515290 1000 True 529.000000 529 76.581000 4248 5240 1 chr5B.!!$R6 992
40 TraesCS3D01G023600 chr5B 533450308 533451282 974 True 472.000000 472 76.083000 4255 5248 1 chr5B.!!$R3 993
41 TraesCS3D01G023600 chr5B 533567362 533572968 5606 True 448.500000 590 77.153500 1015 5521 2 chr5B.!!$R9 4506
42 TraesCS3D01G023600 chr5B 532548092 532549330 1238 False 446.000000 446 73.793000 1050 2279 1 chr5B.!!$F3 1229
43 TraesCS3D01G023600 chr5B 531814450 531815696 1246 False 387.000000 387 73.214000 1067 2307 1 chr5B.!!$F1 1240
44 TraesCS3D01G023600 chr5B 532237249 532238564 1315 False 342.000000 342 72.386000 1016 2320 1 chr5B.!!$F2 1304
45 TraesCS3D01G023600 chr4A 580507595 580508210 615 True 702.000000 702 87.143000 2752 3381 1 chr4A.!!$R1 629
46 TraesCS3D01G023600 chrUn 63288717 63291661 2944 True 541.500000 604 75.932500 1009 5528 2 chrUn.!!$R3 4519
47 TraesCS3D01G023600 chrUn 299951885 299953066 1181 True 479.000000 479 74.542000 1009 2181 1 chrUn.!!$R1 1172
48 TraesCS3D01G023600 chrUn 434912806 434913356 550 False 409.000000 409 80.427000 3563 4114 1 chrUn.!!$F1 551
49 TraesCS3D01G023600 chrUn 435053739 435054288 549 False 398.000000 398 80.036000 3563 4114 1 chrUn.!!$F2 551
50 TraesCS3D01G023600 chr2D 12631469 12634698 3229 True 533.000000 593 75.852500 1009 5248 2 chr2D.!!$R2 4239
51 TraesCS3D01G023600 chr2B 20143791 20145079 1288 False 538.000000 538 74.771000 1006 2279 1 chr2B.!!$F1 1273
52 TraesCS3D01G023600 chr6A 18928946 18929704 758 False 510.000000 510 79.288000 3343 4114 1 chr6A.!!$F1 771

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
92 93 0.021981 GCTTTTATTTGCGCGCGAAC 59.978 50.0 34.54 18.14 0.00 3.95 F
321 322 0.027063 CGTGAACTGGAAACGCGTTT 59.973 50.0 35.28 35.28 35.14 3.60 F
326 327 0.099791 ACTGGAAACGCGTTTTGTGG 59.900 50.0 35.06 25.42 32.11 4.17 F
331 332 0.179158 AAACGCGTTTTGTGGGTCAC 60.179 50.0 30.36 0.00 34.56 3.67 F
1247 2152 0.240945 GTGTGGGTTGCCAATCGAAG 59.759 55.0 0.00 0.00 0.00 3.79 F
2049 2981 0.463474 GGAAGGATCTGCTGGACTGC 60.463 60.0 0.00 0.00 0.00 4.40 F
3887 6874 0.108424 CTGAGGAAGAAGGAGGTGCG 60.108 60.0 0.00 0.00 0.00 5.34 F
3945 6932 0.034283 TTGCAGATAGGCATGCCACA 60.034 50.0 37.18 24.90 44.48 4.17 F
3979 6966 0.035343 GGGCCCTACCTGTCAGTTTC 60.035 60.0 17.04 0.00 39.10 2.78 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2049 2981 0.040425 CCAAAAAGCCGTCGTCCTTG 60.040 55.000 0.00 0.00 0.00 3.61 R
2051 2983 2.258726 GCCAAAAAGCCGTCGTCCT 61.259 57.895 0.00 0.00 0.00 3.85 R
2202 3134 2.911509 TTTCCACCGGACCGTCGA 60.912 61.111 9.46 1.75 0.00 4.20 R
2390 3366 7.164122 TGCTATAAGAATAGAGAAATGGCCAG 58.836 38.462 13.05 0.00 37.84 4.85 R
2856 5818 0.174389 TCAGAGAATGAGTGCTCGGC 59.826 55.000 0.00 0.00 36.29 5.54 R
3926 6913 0.034283 TGTGGCATGCCTATCTGCAA 60.034 50.000 35.53 11.81 45.84 4.08 R
4860 16638 0.392461 TTTCCGGCTTTCAGATCCCG 60.392 55.000 0.00 0.00 40.39 5.14 R
5591 17404 0.465705 TCACCTCCCATGAATCTCGC 59.534 55.000 0.00 0.00 0.00 5.03 R
5906 17721 2.492012 AGCAGCTCTCAAGAACAACTG 58.508 47.619 0.00 0.00 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.264947 CAAGAGCGACCAAGATGATCAA 58.735 45.455 0.00 0.00 0.00 2.57
23 24 2.158986 AGAGCGACCAAGATGATCAAGG 60.159 50.000 0.00 2.29 0.00 3.61
24 25 1.833630 AGCGACCAAGATGATCAAGGA 59.166 47.619 0.00 0.00 0.00 3.36
26 27 2.677902 GCGACCAAGATGATCAAGGACA 60.678 50.000 0.00 0.00 0.00 4.02
27 28 3.801698 CGACCAAGATGATCAAGGACAT 58.198 45.455 0.00 0.00 0.00 3.06
28 29 3.558829 CGACCAAGATGATCAAGGACATG 59.441 47.826 0.00 0.00 0.00 3.21
29 30 3.881688 GACCAAGATGATCAAGGACATGG 59.118 47.826 0.00 7.30 0.00 3.66
31 32 3.881688 CCAAGATGATCAAGGACATGGTC 59.118 47.826 0.00 0.00 0.00 4.02
42 43 0.169009 GACATGGTCCTCGCTTTTGC 59.831 55.000 0.00 0.00 43.23 3.68
54 55 1.775869 GCTTTTGCAAGTCCTTCTGC 58.224 50.000 0.00 0.00 46.58 4.26
55 56 1.927710 GCTTTTGCAAGTCCTTCTGCG 60.928 52.381 0.00 0.00 46.58 5.18
57 58 1.388547 TTTGCAAGTCCTTCTGCGTT 58.611 45.000 0.00 0.00 0.00 4.84
58 59 1.388547 TTGCAAGTCCTTCTGCGTTT 58.611 45.000 0.00 0.00 0.00 3.60
59 60 0.662619 TGCAAGTCCTTCTGCGTTTG 59.337 50.000 0.00 0.00 0.00 2.93
61 62 1.334149 GCAAGTCCTTCTGCGTTTGTC 60.334 52.381 0.00 0.00 0.00 3.18
62 63 1.264288 CAAGTCCTTCTGCGTTTGTCC 59.736 52.381 0.00 0.00 0.00 4.02
63 64 0.759346 AGTCCTTCTGCGTTTGTCCT 59.241 50.000 0.00 0.00 0.00 3.85
64 65 1.149148 GTCCTTCTGCGTTTGTCCTC 58.851 55.000 0.00 0.00 0.00 3.71
65 66 0.756294 TCCTTCTGCGTTTGTCCTCA 59.244 50.000 0.00 0.00 0.00 3.86
66 67 1.140052 TCCTTCTGCGTTTGTCCTCAA 59.860 47.619 0.00 0.00 0.00 3.02
67 68 1.946768 CCTTCTGCGTTTGTCCTCAAA 59.053 47.619 0.00 0.00 40.64 2.69
68 69 2.357637 CCTTCTGCGTTTGTCCTCAAAA 59.642 45.455 0.00 0.00 43.78 2.44
72 73 2.028130 TGCGTTTGTCCTCAAAACCAT 58.972 42.857 0.00 0.00 43.78 3.55
75 76 2.034558 CGTTTGTCCTCAAAACCATGCT 59.965 45.455 0.00 0.00 43.78 3.79
76 77 3.490761 CGTTTGTCCTCAAAACCATGCTT 60.491 43.478 0.00 0.00 43.78 3.91
77 78 4.441792 GTTTGTCCTCAAAACCATGCTTT 58.558 39.130 0.00 0.00 43.78 3.51
78 79 4.751767 TTGTCCTCAAAACCATGCTTTT 57.248 36.364 0.00 0.00 0.00 2.27
80 81 6.418057 TTGTCCTCAAAACCATGCTTTTAT 57.582 33.333 0.00 0.00 0.00 1.40
81 82 6.418057 TGTCCTCAAAACCATGCTTTTATT 57.582 33.333 0.00 0.00 0.00 1.40
82 83 6.825610 TGTCCTCAAAACCATGCTTTTATTT 58.174 32.000 0.00 0.00 0.00 1.40
83 84 6.705381 TGTCCTCAAAACCATGCTTTTATTTG 59.295 34.615 0.00 0.00 0.00 2.32
84 85 5.700373 TCCTCAAAACCATGCTTTTATTTGC 59.300 36.000 0.00 0.00 0.00 3.68
85 86 5.389725 CCTCAAAACCATGCTTTTATTTGCG 60.390 40.000 0.00 0.00 0.00 4.85
86 87 4.084118 TCAAAACCATGCTTTTATTTGCGC 60.084 37.500 0.00 0.00 0.00 6.09
87 88 1.627879 ACCATGCTTTTATTTGCGCG 58.372 45.000 0.00 0.00 0.00 6.86
88 89 0.298411 CCATGCTTTTATTTGCGCGC 59.702 50.000 27.26 27.26 0.00 6.86
89 90 0.044835 CATGCTTTTATTTGCGCGCG 60.045 50.000 28.44 28.44 0.00 6.86
90 91 0.179176 ATGCTTTTATTTGCGCGCGA 60.179 45.000 37.18 23.83 0.00 5.87
91 92 0.386100 TGCTTTTATTTGCGCGCGAA 60.386 45.000 34.00 34.00 0.00 4.70
92 93 0.021981 GCTTTTATTTGCGCGCGAAC 59.978 50.000 34.54 18.14 0.00 3.95
93 94 1.602191 CTTTTATTTGCGCGCGAACT 58.398 45.000 34.54 24.02 0.00 3.01
95 96 3.350912 CTTTTATTTGCGCGCGAACTAT 58.649 40.909 34.54 21.82 0.00 2.12
96 97 2.361094 TTATTTGCGCGCGAACTATG 57.639 45.000 34.54 2.07 0.00 2.23
98 99 0.446222 ATTTGCGCGCGAACTATGTT 59.554 45.000 34.54 16.11 0.00 2.71
100 101 0.236187 TTGCGCGCGAACTATGTTTT 59.764 45.000 37.18 0.00 0.00 2.43
101 102 1.069255 TGCGCGCGAACTATGTTTTA 58.931 45.000 37.18 0.00 0.00 1.52
102 103 1.661617 TGCGCGCGAACTATGTTTTAT 59.338 42.857 37.18 0.00 0.00 1.40
103 104 2.285371 TGCGCGCGAACTATGTTTTATC 60.285 45.455 37.18 10.90 0.00 1.75
104 105 2.536641 CGCGCGAACTATGTTTTATCG 58.463 47.619 28.94 0.00 36.64 2.92
106 107 3.540744 CGCGCGAACTATGTTTTATCGTT 60.541 43.478 28.94 0.00 36.01 3.85
107 108 3.952021 GCGCGAACTATGTTTTATCGTTC 59.048 43.478 12.10 0.00 36.01 3.95
115 116 9.749490 GAACTATGTTTTATCGTTCGAATTTGA 57.251 29.630 0.00 0.21 0.00 2.69
119 120 8.655378 ATGTTTTATCGTTCGAATTTGAACTC 57.345 30.769 28.00 10.44 44.76 3.01
120 121 7.631822 TGTTTTATCGTTCGAATTTGAACTCA 58.368 30.769 28.00 18.42 44.76 3.41
121 122 8.286800 TGTTTTATCGTTCGAATTTGAACTCAT 58.713 29.630 28.00 22.35 44.76 2.90
122 123 9.113876 GTTTTATCGTTCGAATTTGAACTCATT 57.886 29.630 28.00 16.05 44.76 2.57
124 125 8.653984 TTATCGTTCGAATTTGAACTCATTTG 57.346 30.769 28.00 15.99 44.76 2.32
125 126 6.055231 TCGTTCGAATTTGAACTCATTTGT 57.945 33.333 28.00 0.00 44.76 2.83
126 127 6.491394 TCGTTCGAATTTGAACTCATTTGTT 58.509 32.000 28.00 0.00 44.76 2.83
127 128 7.631822 TCGTTCGAATTTGAACTCATTTGTTA 58.368 30.769 28.00 7.00 44.76 2.41
128 129 7.796660 TCGTTCGAATTTGAACTCATTTGTTAG 59.203 33.333 28.00 13.75 44.76 2.34
129 130 7.796660 CGTTCGAATTTGAACTCATTTGTTAGA 59.203 33.333 28.00 0.00 44.76 2.10
130 131 9.445786 GTTCGAATTTGAACTCATTTGTTAGAA 57.554 29.630 25.32 0.00 43.82 2.10
133 134 8.779561 CGAATTTGAACTCATTTGTTAGAATCG 58.220 33.333 0.00 0.00 0.00 3.34
134 135 8.452989 AATTTGAACTCATTTGTTAGAATCGC 57.547 30.769 0.00 0.00 0.00 4.58
135 136 6.801539 TTGAACTCATTTGTTAGAATCGCT 57.198 33.333 0.00 0.00 0.00 4.93
138 139 5.786401 ACTCATTTGTTAGAATCGCTGTC 57.214 39.130 0.00 0.00 0.00 3.51
140 141 5.700832 ACTCATTTGTTAGAATCGCTGTCAA 59.299 36.000 0.00 0.00 0.00 3.18
141 142 6.204688 ACTCATTTGTTAGAATCGCTGTCAAA 59.795 34.615 0.00 0.00 36.11 2.69
142 143 7.094634 ACTCATTTGTTAGAATCGCTGTCAAAT 60.095 33.333 0.00 0.00 39.45 2.32
143 144 7.592938 TCATTTGTTAGAATCGCTGTCAAATT 58.407 30.769 0.00 0.00 38.20 1.82
144 145 7.750458 TCATTTGTTAGAATCGCTGTCAAATTC 59.250 33.333 0.00 0.00 38.20 2.17
145 146 5.203358 TGTTAGAATCGCTGTCAAATTCG 57.797 39.130 0.00 0.00 35.14 3.34
146 147 2.813779 AGAATCGCTGTCAAATTCGC 57.186 45.000 0.00 0.00 35.14 4.70
147 148 2.350522 AGAATCGCTGTCAAATTCGCT 58.649 42.857 0.00 0.00 35.14 4.93
149 150 3.932710 AGAATCGCTGTCAAATTCGCTAA 59.067 39.130 0.00 0.00 35.14 3.09
150 151 4.572389 AGAATCGCTGTCAAATTCGCTAAT 59.428 37.500 0.00 0.00 35.14 1.73
151 152 4.882671 ATCGCTGTCAAATTCGCTAATT 57.117 36.364 0.00 0.00 36.87 1.40
152 153 4.002267 TCGCTGTCAAATTCGCTAATTG 57.998 40.909 0.00 0.00 35.46 2.32
153 154 3.100817 CGCTGTCAAATTCGCTAATTGG 58.899 45.455 0.00 0.00 35.46 3.16
154 155 3.438360 GCTGTCAAATTCGCTAATTGGG 58.562 45.455 0.00 0.00 35.46 4.12
155 156 3.128589 GCTGTCAAATTCGCTAATTGGGA 59.871 43.478 0.00 0.00 35.46 4.37
157 158 5.679638 GCTGTCAAATTCGCTAATTGGGATT 60.680 40.000 0.00 0.00 35.46 3.01
158 159 6.279513 TGTCAAATTCGCTAATTGGGATTT 57.720 33.333 0.00 0.00 35.46 2.17
160 161 7.158021 TGTCAAATTCGCTAATTGGGATTTTT 58.842 30.769 0.00 0.00 38.35 1.94
161 162 7.117523 TGTCAAATTCGCTAATTGGGATTTTTG 59.882 33.333 0.00 15.07 38.35 2.44
162 163 6.593382 TCAAATTCGCTAATTGGGATTTTTGG 59.407 34.615 17.64 9.30 38.35 3.28
166 167 5.233988 TCGCTAATTGGGATTTTTGGTTTG 58.766 37.500 0.00 0.00 32.41 2.93
167 168 4.142924 CGCTAATTGGGATTTTTGGTTTGC 60.143 41.667 0.00 0.00 0.00 3.68
168 169 4.142924 GCTAATTGGGATTTTTGGTTTGCG 60.143 41.667 0.00 0.00 0.00 4.85
169 170 2.246719 TTGGGATTTTTGGTTTGCGG 57.753 45.000 0.00 0.00 0.00 5.69
170 171 0.394565 TGGGATTTTTGGTTTGCGGG 59.605 50.000 0.00 0.00 0.00 6.13
173 174 1.414378 GATTTTTGGTTTGCGGGTCG 58.586 50.000 0.00 0.00 0.00 4.79
174 175 1.001158 GATTTTTGGTTTGCGGGTCGA 60.001 47.619 0.00 0.00 0.00 4.20
176 177 0.312416 TTTTGGTTTGCGGGTCGATG 59.688 50.000 0.00 0.00 0.00 3.84
177 178 2.136196 TTTGGTTTGCGGGTCGATGC 62.136 55.000 0.00 0.00 0.00 3.91
179 180 2.480555 GTTTGCGGGTCGATGCTG 59.519 61.111 8.41 0.00 0.00 4.41
180 181 3.430862 TTTGCGGGTCGATGCTGC 61.431 61.111 8.41 0.00 0.00 5.25
185 186 4.899239 GGGTCGATGCTGCCCGAG 62.899 72.222 13.16 0.00 35.31 4.63
199 200 3.121030 CGAGCAGACCCCGCAAAG 61.121 66.667 0.00 0.00 0.00 2.77
200 201 3.435186 GAGCAGACCCCGCAAAGC 61.435 66.667 0.00 0.00 0.00 3.51
203 204 4.697756 CAGACCCCGCAAAGCCGA 62.698 66.667 0.00 0.00 0.00 5.54
204 205 4.699522 AGACCCCGCAAAGCCGAC 62.700 66.667 0.00 0.00 0.00 4.79
209 210 4.745751 CCGCAAAGCCGACCCGTA 62.746 66.667 0.00 0.00 0.00 4.02
211 212 2.319096 CGCAAAGCCGACCCGTAAA 61.319 57.895 0.00 0.00 0.00 2.01
213 214 0.311477 GCAAAGCCGACCCGTAAAAA 59.689 50.000 0.00 0.00 0.00 1.94
214 215 1.664874 GCAAAGCCGACCCGTAAAAAG 60.665 52.381 0.00 0.00 0.00 2.27
215 216 1.068816 CAAAGCCGACCCGTAAAAAGG 60.069 52.381 0.00 0.00 0.00 3.11
216 217 1.239296 AAGCCGACCCGTAAAAAGGC 61.239 55.000 0.00 0.00 44.45 4.35
218 219 1.310216 GCCGACCCGTAAAAAGGCAT 61.310 55.000 0.00 0.00 43.65 4.40
223 224 3.344515 GACCCGTAAAAAGGCATCTTCT 58.655 45.455 0.00 0.00 31.82 2.85
224 225 3.756963 GACCCGTAAAAAGGCATCTTCTT 59.243 43.478 0.00 0.00 31.82 2.52
225 226 3.756963 ACCCGTAAAAAGGCATCTTCTTC 59.243 43.478 0.00 0.00 31.82 2.87
226 227 3.128764 CCCGTAAAAAGGCATCTTCTTCC 59.871 47.826 0.00 0.00 31.82 3.46
228 229 4.217550 CCGTAAAAAGGCATCTTCTTCCAA 59.782 41.667 0.00 0.00 31.82 3.53
230 231 6.094881 CCGTAAAAAGGCATCTTCTTCCAATA 59.905 38.462 0.00 0.00 31.82 1.90
232 233 7.857885 CGTAAAAAGGCATCTTCTTCCAATATC 59.142 37.037 0.00 0.00 31.82 1.63
233 234 6.721704 AAAAGGCATCTTCTTCCAATATCC 57.278 37.500 0.00 0.00 31.82 2.59
234 235 5.659849 AAGGCATCTTCTTCCAATATCCT 57.340 39.130 0.00 0.00 0.00 3.24
235 236 5.659849 AGGCATCTTCTTCCAATATCCTT 57.340 39.130 0.00 0.00 0.00 3.36
236 237 6.023334 AGGCATCTTCTTCCAATATCCTTT 57.977 37.500 0.00 0.00 0.00 3.11
237 238 6.438620 AGGCATCTTCTTCCAATATCCTTTT 58.561 36.000 0.00 0.00 0.00 2.27
238 239 7.586349 AGGCATCTTCTTCCAATATCCTTTTA 58.414 34.615 0.00 0.00 0.00 1.52
239 240 8.230306 AGGCATCTTCTTCCAATATCCTTTTAT 58.770 33.333 0.00 0.00 0.00 1.40
240 241 9.520515 GGCATCTTCTTCCAATATCCTTTTATA 57.479 33.333 0.00 0.00 0.00 0.98
246 247 7.447594 TCTTCCAATATCCTTTTATACGGGTC 58.552 38.462 0.00 0.00 0.00 4.46
247 248 6.117975 TCCAATATCCTTTTATACGGGTCC 57.882 41.667 0.00 0.00 0.00 4.46
248 249 4.933400 CCAATATCCTTTTATACGGGTCCG 59.067 45.833 7.97 7.97 46.03 4.79
264 265 2.030562 CGTTTGCGGGGTCTGACT 59.969 61.111 7.85 0.00 0.00 3.41
265 266 2.027625 CGTTTGCGGGGTCTGACTC 61.028 63.158 7.85 2.89 0.00 3.36
266 267 1.371558 GTTTGCGGGGTCTGACTCT 59.628 57.895 7.74 0.00 0.00 3.24
267 268 0.951040 GTTTGCGGGGTCTGACTCTG 60.951 60.000 12.25 12.25 0.00 3.35
270 271 4.135153 CGGGGTCTGACTCTGCGG 62.135 72.222 7.74 0.00 0.00 5.69
271 272 4.459089 GGGGTCTGACTCTGCGGC 62.459 72.222 7.74 0.00 0.00 6.53
272 273 4.459089 GGGTCTGACTCTGCGGCC 62.459 72.222 7.85 0.00 0.00 6.13
273 274 4.803426 GGTCTGACTCTGCGGCCG 62.803 72.222 24.05 24.05 0.00 6.13
298 299 4.273257 CGGCCCGCAAAACCGTTT 62.273 61.111 0.00 0.00 42.01 3.60
300 301 2.105328 GCCCGCAAAACCGTTTGT 59.895 55.556 0.00 0.00 45.06 2.83
301 302 1.947146 GCCCGCAAAACCGTTTGTC 60.947 57.895 0.00 0.00 45.06 3.18
302 303 1.299544 CCCGCAAAACCGTTTGTCC 60.300 57.895 0.00 0.00 45.06 4.02
303 304 1.655959 CCGCAAAACCGTTTGTCCG 60.656 57.895 0.00 1.39 45.06 4.79
305 306 1.197368 CGCAAAACCGTTTGTCCGTG 61.197 55.000 0.00 0.00 45.06 4.94
308 309 2.178783 CAAAACCGTTTGTCCGTGAAC 58.821 47.619 0.00 0.00 39.49 3.18
309 310 1.741528 AAACCGTTTGTCCGTGAACT 58.258 45.000 0.00 0.00 0.00 3.01
310 311 1.011333 AACCGTTTGTCCGTGAACTG 58.989 50.000 0.00 0.00 0.00 3.16
311 312 0.812412 ACCGTTTGTCCGTGAACTGG 60.812 55.000 0.00 0.00 0.00 4.00
312 313 0.531090 CCGTTTGTCCGTGAACTGGA 60.531 55.000 0.00 0.00 0.00 3.86
315 316 2.538132 CGTTTGTCCGTGAACTGGAAAC 60.538 50.000 0.00 0.00 37.23 2.78
316 317 1.292061 TTGTCCGTGAACTGGAAACG 58.708 50.000 0.00 0.00 37.23 3.60
318 319 1.952133 TCCGTGAACTGGAAACGCG 60.952 57.895 3.53 3.53 36.02 6.01
321 322 0.027063 CGTGAACTGGAAACGCGTTT 59.973 50.000 35.28 35.28 35.14 3.60
323 324 1.843753 GTGAACTGGAAACGCGTTTTG 59.156 47.619 35.06 27.64 32.11 2.44
324 325 1.469308 TGAACTGGAAACGCGTTTTGT 59.531 42.857 35.06 28.21 32.11 2.83
325 326 1.843753 GAACTGGAAACGCGTTTTGTG 59.156 47.619 35.06 27.04 32.11 3.33
326 327 0.099791 ACTGGAAACGCGTTTTGTGG 59.900 50.000 35.06 25.42 32.11 4.17
328 329 1.313812 TGGAAACGCGTTTTGTGGGT 61.314 50.000 35.06 14.31 32.11 4.51
331 332 0.179158 AAACGCGTTTTGTGGGTCAC 60.179 50.000 30.36 0.00 34.56 3.67
332 333 1.995646 AACGCGTTTTGTGGGTCACC 61.996 55.000 20.79 0.00 32.73 4.02
333 334 2.330041 GCGTTTTGTGGGTCACCG 59.670 61.111 0.00 0.00 40.75 4.94
335 336 1.995646 GCGTTTTGTGGGTCACCGTT 61.996 55.000 0.00 0.00 40.75 4.44
336 337 1.297664 CGTTTTGTGGGTCACCGTTA 58.702 50.000 0.00 0.00 40.75 3.18
337 338 1.874872 CGTTTTGTGGGTCACCGTTAT 59.125 47.619 0.00 0.00 40.75 1.89
338 339 3.065655 CGTTTTGTGGGTCACCGTTATA 58.934 45.455 0.00 0.00 40.75 0.98
340 341 2.367030 TTGTGGGTCACCGTTATACG 57.633 50.000 0.00 0.00 42.11 3.06
352 353 2.224606 CGTTATACGGGGTCTGCTAGA 58.775 52.381 0.00 0.00 38.08 2.43
353 354 2.225963 CGTTATACGGGGTCTGCTAGAG 59.774 54.545 0.00 0.00 38.08 2.43
354 355 3.484407 GTTATACGGGGTCTGCTAGAGA 58.516 50.000 0.00 0.00 0.00 3.10
356 357 5.251764 GTTATACGGGGTCTGCTAGAGATA 58.748 45.833 0.00 0.00 31.63 1.98
359 360 2.156098 CGGGGTCTGCTAGAGATACTC 58.844 57.143 0.00 0.00 31.63 2.59
404 407 5.460646 CCTCAGATTTTTCTTTGCGCTTTA 58.539 37.500 9.73 0.00 0.00 1.85
495 498 2.909662 GCAGAGGCTAGGGATTATCCTT 59.090 50.000 11.40 6.12 38.30 3.36
531 534 8.512966 AAAAAGAGTCTAGAAAAACTTGAGCT 57.487 30.769 0.00 0.00 31.79 4.09
606 609 9.290988 TGTGCATTTAGTTATTTCCTAGTTTGA 57.709 29.630 0.00 0.00 0.00 2.69
618 621 4.406456 TCCTAGTTTGATTTGCACCATGT 58.594 39.130 0.00 0.00 0.00 3.21
641 644 5.807011 GTCCGAAAGCTTGCAAATTATCAAT 59.193 36.000 5.01 0.00 0.00 2.57
645 648 5.945144 AAGCTTGCAAATTATCAATCCCT 57.055 34.783 0.00 0.00 0.00 4.20
733 737 2.225496 TGGGTGGAGGGTTTTTATGCAT 60.225 45.455 3.79 3.79 0.00 3.96
782 786 7.033185 ACCAAGTCGTTGAAATATAAAATGCC 58.967 34.615 0.00 0.00 35.46 4.40
808 812 3.563808 TCCAATCACTGAAGGTTTGAACG 59.436 43.478 1.93 0.00 0.00 3.95
874 878 9.632807 TTGTCCAATAAATTAAAAATCAGTCGG 57.367 29.630 0.00 0.00 0.00 4.79
877 881 9.015367 TCCAATAAATTAAAAATCAGTCGGACA 57.985 29.630 11.27 0.00 0.00 4.02
879 883 9.840427 CAATAAATTAAAAATCAGTCGGACACT 57.160 29.630 11.27 0.00 34.67 3.55
883 887 4.985044 AAAAATCAGTCGGACACTAACG 57.015 40.909 11.27 0.00 32.21 3.18
886 890 0.956633 TCAGTCGGACACTAACGCTT 59.043 50.000 11.27 0.00 32.21 4.68
887 891 1.060713 CAGTCGGACACTAACGCTTG 58.939 55.000 11.27 0.00 32.21 4.01
891 895 2.660236 GTCGGACACTAACGCTTGTAAG 59.340 50.000 2.62 0.00 0.00 2.34
984 1875 7.536622 CGATTACGTAGTACATTGGATCCTTAC 59.463 40.741 14.23 8.97 45.76 2.34
1247 2152 0.240945 GTGTGGGTTGCCAATCGAAG 59.759 55.000 0.00 0.00 0.00 3.79
1254 2159 1.611491 GTTGCCAATCGAAGAAACCCA 59.389 47.619 0.00 0.00 43.58 4.51
1255 2160 2.214376 TGCCAATCGAAGAAACCCAT 57.786 45.000 0.00 0.00 43.58 4.00
1257 2162 2.091541 GCCAATCGAAGAAACCCATCA 58.908 47.619 0.00 0.00 43.58 3.07
1260 2165 2.024176 ATCGAAGAAACCCATCACCG 57.976 50.000 0.00 0.00 43.58 4.94
1262 2167 1.076332 CGAAGAAACCCATCACCGAC 58.924 55.000 0.00 0.00 0.00 4.79
1867 2784 0.808453 CAACAAGTCGTCGGTGTGGT 60.808 55.000 0.00 0.00 0.00 4.16
2049 2981 0.463474 GGAAGGATCTGCTGGACTGC 60.463 60.000 0.00 0.00 0.00 4.40
2051 2983 0.694771 AAGGATCTGCTGGACTGCAA 59.305 50.000 5.42 0.00 42.83 4.08
2246 3178 3.660111 GTGCTTGGTGTGGTCGGC 61.660 66.667 0.00 0.00 0.00 5.54
2325 3257 2.662309 CCTTGCAGGCTTGAATGGT 58.338 52.632 0.00 0.00 0.00 3.55
2328 3260 2.440409 CTTGCAGGCTTGAATGGTACT 58.560 47.619 0.00 0.00 0.00 2.73
2390 3366 8.492673 TCACTAACATACCTTCATGATTTCAC 57.507 34.615 0.00 0.00 0.00 3.18
2401 3377 4.346730 TCATGATTTCACTGGCCATTTCT 58.653 39.130 5.51 0.00 0.00 2.52
2414 3510 7.118971 CACTGGCCATTTCTCTATTCTTATAGC 59.881 40.741 5.51 0.00 34.85 2.97
2443 3585 6.862209 TGCATGTATTCCATAGGTGAAAAAC 58.138 36.000 0.00 0.00 30.71 2.43
2471 3613 5.182001 GGGGCATTGTAGTGATGATTGTATC 59.818 44.000 0.00 0.00 0.00 2.24
2490 3632 5.417580 TGTATCACCAATTTTAGGAACTGGC 59.582 40.000 0.00 0.00 41.52 4.85
2592 3764 4.348461 TGACCACCTTGAACCATGTAAGTA 59.652 41.667 0.00 0.00 0.00 2.24
2594 3766 4.103469 ACCACCTTGAACCATGTAAGTACA 59.897 41.667 0.00 0.00 40.98 2.90
2605 3777 9.733219 GAACCATGTAAGTACATCTACTACTTC 57.267 37.037 0.85 0.00 44.57 3.01
2607 3779 9.422681 ACCATGTAAGTACATCTACTACTTCAT 57.577 33.333 0.85 0.00 44.57 2.57
2637 3809 8.749499 CCGTAACGTTGGACTATAAAATCTTAG 58.251 37.037 11.99 0.00 0.00 2.18
2638 3810 9.294030 CGTAACGTTGGACTATAAAATCTTAGT 57.706 33.333 11.99 0.00 0.00 2.24
2682 4463 4.879545 GCGGACAATAGGGAGAAAATGTAA 59.120 41.667 0.00 0.00 0.00 2.41
2683 4464 5.220796 GCGGACAATAGGGAGAAAATGTAAC 60.221 44.000 0.00 0.00 0.00 2.50
2686 4467 6.095021 GGACAATAGGGAGAAAATGTAACACC 59.905 42.308 0.00 0.00 0.00 4.16
2687 4468 6.548321 ACAATAGGGAGAAAATGTAACACCA 58.452 36.000 0.00 0.00 0.00 4.17
2689 4470 7.339466 ACAATAGGGAGAAAATGTAACACCATC 59.661 37.037 0.00 0.00 0.00 3.51
2739 5695 1.202964 TCAGGTCTACCGTCTTCCACA 60.203 52.381 0.00 0.00 42.08 4.17
2740 5696 1.825474 CAGGTCTACCGTCTTCCACAT 59.175 52.381 0.00 0.00 42.08 3.21
2741 5697 3.021695 CAGGTCTACCGTCTTCCACATA 58.978 50.000 0.00 0.00 42.08 2.29
2748 5704 6.207025 GTCTACCGTCTTCCACATAGACATAT 59.793 42.308 0.00 0.00 41.64 1.78
2750 5706 6.971726 ACCGTCTTCCACATAGACATATAA 57.028 37.500 0.00 0.00 41.64 0.98
2777 5739 7.040062 TGAGTTATTTACCCAAAACCATCACAG 60.040 37.037 0.00 0.00 0.00 3.66
2787 5749 1.072266 ACCATCACAGTTGGGGCTAA 58.928 50.000 0.00 0.00 38.64 3.09
2812 5774 6.139048 GTAACAACTTGGTACCACATTTGT 57.861 37.500 21.44 21.44 34.57 2.83
2814 5776 6.183360 GTAACAACTTGGTACCACATTTGTGA 60.183 38.462 25.18 19.15 45.30 3.58
2853 5815 2.413796 TCAACTTTGCGCCTAACGTATG 59.586 45.455 4.18 0.00 46.11 2.39
2866 5828 1.939785 CGTATGACGCCGAGCACTC 60.940 63.158 0.00 0.00 33.65 3.51
2892 5854 4.021456 TCTCTGATAAGCTCACGGAAACAA 60.021 41.667 0.00 0.00 0.00 2.83
2897 5859 3.626028 AAGCTCACGGAAACAATGAAC 57.374 42.857 0.00 0.00 0.00 3.18
2942 5904 1.079819 CTGACGTGGCGAAGACCAT 60.080 57.895 0.00 0.00 43.01 3.55
3002 5964 2.624293 CCCACCTGTCCATGACTAGAGA 60.624 54.545 0.00 0.00 33.15 3.10
3024 5986 5.936956 AGAGTCATCTTCTTCACAACATTCC 59.063 40.000 0.00 0.00 28.57 3.01
3149 6113 3.545703 GCCTAACCTTGAGCATGTATGT 58.454 45.455 0.00 0.00 0.00 2.29
3222 6187 1.812922 CCGACAGAGCATGGTGAGC 60.813 63.158 0.00 0.00 0.00 4.26
3227 6192 1.683707 AGAGCATGGTGAGCCGAGA 60.684 57.895 0.00 0.00 37.67 4.04
3231 6196 1.372087 GCATGGTGAGCCGAGAAAGG 61.372 60.000 0.00 0.00 37.67 3.11
3296 6261 0.250513 AAGAGGACATGTCGAAGCCC 59.749 55.000 19.33 5.33 0.00 5.19
3308 6273 1.497716 TCGAAGCCCAGGGACTAGATA 59.502 52.381 10.89 0.00 36.02 1.98
3314 6279 1.145325 CCCAGGGACTAGATACGAGGT 59.855 57.143 0.00 0.00 36.02 3.85
3316 6281 2.423088 CCAGGGACTAGATACGAGGTGT 60.423 54.545 0.00 0.00 36.02 4.16
3324 6289 7.385267 GGACTAGATACGAGGTGTAGAGATTA 58.615 42.308 0.00 0.00 36.25 1.75
3325 6290 7.546667 GGACTAGATACGAGGTGTAGAGATTAG 59.453 44.444 0.00 0.00 36.25 1.73
3347 6312 1.470996 GGAGCAGGAGATCGAGGCAT 61.471 60.000 0.00 0.00 0.00 4.40
3388 6353 1.372582 GAGAAGATGACCGCAATGCA 58.627 50.000 5.91 0.00 0.00 3.96
3416 6381 1.153628 GGACGTCCGGATCCAAGTG 60.154 63.158 20.85 0.79 34.87 3.16
3461 6430 1.691434 CCTGAGCTCCCAGATAAGGTC 59.309 57.143 12.15 0.00 39.79 3.85
3495 6464 2.435805 GTGGTCTCTGGCCATGAGAATA 59.564 50.000 26.54 18.78 41.52 1.75
3497 6466 3.523157 TGGTCTCTGGCCATGAGAATAAA 59.477 43.478 26.54 14.94 41.52 1.40
3499 6468 4.141620 GGTCTCTGGCCATGAGAATAAAGA 60.142 45.833 26.54 9.49 41.52 2.52
3522 6502 1.434622 GCGACGACTACGGATCAGGA 61.435 60.000 0.00 0.00 44.46 3.86
3530 6516 2.035632 CTACGGATCAGGAAGGAGCTT 58.964 52.381 0.00 0.00 0.00 3.74
3554 6541 2.747686 GTGTCGTGGGGTGTGGAT 59.252 61.111 0.00 0.00 0.00 3.41
3566 6553 4.796495 GTGGATGCCGGTGGGGTC 62.796 72.222 1.90 0.00 38.44 4.46
3569 6556 2.766651 GATGCCGGTGGGGTCCTA 60.767 66.667 1.90 0.00 38.44 2.94
3574 6561 3.782443 CGGTGGGGTCCTAGGCAC 61.782 72.222 2.96 6.30 0.00 5.01
3576 6563 2.609610 GTGGGGTCCTAGGCACCA 60.610 66.667 19.67 19.67 35.35 4.17
3579 6566 1.384643 GGGGTCCTAGGCACCAGAT 60.385 63.158 23.65 0.00 35.35 2.90
3582 6569 1.204146 GGTCCTAGGCACCAGATCAA 58.796 55.000 19.74 0.00 33.63 2.57
3584 6571 1.139853 GTCCTAGGCACCAGATCAAGG 59.860 57.143 2.96 0.00 0.00 3.61
3585 6572 0.471617 CCTAGGCACCAGATCAAGGG 59.528 60.000 0.00 3.24 0.00 3.95
3586 6573 1.207791 CTAGGCACCAGATCAAGGGT 58.792 55.000 8.82 3.84 38.10 4.34
3590 6577 2.671070 ACCAGATCAAGGGTGGCG 59.329 61.111 8.82 0.00 35.67 5.69
3591 6578 2.124570 CCAGATCAAGGGTGGCGG 60.125 66.667 0.00 0.00 0.00 6.13
3592 6579 2.124570 CAGATCAAGGGTGGCGGG 60.125 66.667 0.00 0.00 0.00 6.13
3593 6580 3.411517 AGATCAAGGGTGGCGGGG 61.412 66.667 0.00 0.00 0.00 5.73
3594 6581 3.728373 GATCAAGGGTGGCGGGGT 61.728 66.667 0.00 0.00 0.00 4.95
3595 6582 3.699134 GATCAAGGGTGGCGGGGTC 62.699 68.421 0.00 0.00 0.00 4.46
3609 6596 4.388499 GGTCACGGGCGTCCACAT 62.388 66.667 6.96 0.00 0.00 3.21
3610 6597 2.813908 GTCACGGGCGTCCACATC 60.814 66.667 6.96 0.00 0.00 3.06
3611 6598 2.994995 TCACGGGCGTCCACATCT 60.995 61.111 6.96 0.00 0.00 2.90
3612 6599 2.815211 CACGGGCGTCCACATCTG 60.815 66.667 6.96 0.00 0.00 2.90
3613 6600 4.082523 ACGGGCGTCCACATCTGG 62.083 66.667 6.96 0.00 39.23 3.86
3614 6601 3.770040 CGGGCGTCCACATCTGGA 61.770 66.667 6.96 0.00 45.11 3.86
3626 6613 2.522436 TCTGGAACGGACGGTGGT 60.522 61.111 0.00 0.00 39.80 4.16
3627 6614 2.048503 CTGGAACGGACGGTGGTC 60.049 66.667 0.00 0.00 42.66 4.02
3628 6615 3.909258 CTGGAACGGACGGTGGTCG 62.909 68.421 0.00 0.00 44.39 4.79
3629 6616 4.729856 GGAACGGACGGTGGTCGG 62.730 72.222 0.00 0.95 44.39 4.79
3638 6625 3.365265 GGTGGTCGGCAAGGCAAG 61.365 66.667 0.00 0.00 0.00 4.01
3639 6626 2.594592 GTGGTCGGCAAGGCAAGT 60.595 61.111 0.00 0.00 0.00 3.16
3640 6627 2.594303 TGGTCGGCAAGGCAAGTG 60.594 61.111 0.00 0.00 0.00 3.16
3641 6628 3.365265 GGTCGGCAAGGCAAGTGG 61.365 66.667 0.00 0.00 0.00 4.00
3642 6629 4.043200 GTCGGCAAGGCAAGTGGC 62.043 66.667 0.00 0.00 43.74 5.01
3651 6638 4.643387 GCAAGTGGCCCGAGTGGT 62.643 66.667 0.00 0.00 36.11 4.16
3652 6639 2.669569 CAAGTGGCCCGAGTGGTG 60.670 66.667 0.00 0.00 36.04 4.17
3653 6640 4.643387 AAGTGGCCCGAGTGGTGC 62.643 66.667 0.00 0.00 36.04 5.01
3662 6649 4.767255 GAGTGGTGCTGCTCGGGG 62.767 72.222 0.00 0.00 0.00 5.73
3701 6688 4.070552 GGCGTTGGCGAGAGGAGT 62.071 66.667 0.00 0.00 41.24 3.85
3702 6689 2.048127 GCGTTGGCGAGAGGAGTT 60.048 61.111 0.00 0.00 41.33 3.01
3703 6690 2.383527 GCGTTGGCGAGAGGAGTTG 61.384 63.158 0.00 0.00 41.33 3.16
3704 6691 1.738099 CGTTGGCGAGAGGAGTTGG 60.738 63.158 0.00 0.00 41.33 3.77
3705 6692 1.371558 GTTGGCGAGAGGAGTTGGT 59.628 57.895 0.00 0.00 0.00 3.67
3706 6693 0.250338 GTTGGCGAGAGGAGTTGGTT 60.250 55.000 0.00 0.00 0.00 3.67
3707 6694 0.250295 TTGGCGAGAGGAGTTGGTTG 60.250 55.000 0.00 0.00 0.00 3.77
3708 6695 1.118965 TGGCGAGAGGAGTTGGTTGA 61.119 55.000 0.00 0.00 0.00 3.18
3709 6696 0.250513 GGCGAGAGGAGTTGGTTGAT 59.749 55.000 0.00 0.00 0.00 2.57
3710 6697 1.363744 GCGAGAGGAGTTGGTTGATG 58.636 55.000 0.00 0.00 0.00 3.07
3711 6698 2.009042 GCGAGAGGAGTTGGTTGATGG 61.009 57.143 0.00 0.00 0.00 3.51
3712 6699 1.276421 CGAGAGGAGTTGGTTGATGGT 59.724 52.381 0.00 0.00 0.00 3.55
3713 6700 2.704572 GAGAGGAGTTGGTTGATGGTG 58.295 52.381 0.00 0.00 0.00 4.17
3714 6701 1.352352 AGAGGAGTTGGTTGATGGTGG 59.648 52.381 0.00 0.00 0.00 4.61
3715 6702 1.351017 GAGGAGTTGGTTGATGGTGGA 59.649 52.381 0.00 0.00 0.00 4.02
3716 6703 1.352352 AGGAGTTGGTTGATGGTGGAG 59.648 52.381 0.00 0.00 0.00 3.86
3717 6704 1.614317 GGAGTTGGTTGATGGTGGAGG 60.614 57.143 0.00 0.00 0.00 4.30
3718 6705 1.351017 GAGTTGGTTGATGGTGGAGGA 59.649 52.381 0.00 0.00 0.00 3.71
3719 6706 1.780309 AGTTGGTTGATGGTGGAGGAA 59.220 47.619 0.00 0.00 0.00 3.36
3720 6707 2.162681 GTTGGTTGATGGTGGAGGAAG 58.837 52.381 0.00 0.00 0.00 3.46
3721 6708 1.741028 TGGTTGATGGTGGAGGAAGA 58.259 50.000 0.00 0.00 0.00 2.87
3722 6709 1.630369 TGGTTGATGGTGGAGGAAGAG 59.370 52.381 0.00 0.00 0.00 2.85
3723 6710 1.065126 GGTTGATGGTGGAGGAAGAGG 60.065 57.143 0.00 0.00 0.00 3.69
3724 6711 1.630878 GTTGATGGTGGAGGAAGAGGT 59.369 52.381 0.00 0.00 0.00 3.85
3725 6712 2.838202 GTTGATGGTGGAGGAAGAGGTA 59.162 50.000 0.00 0.00 0.00 3.08
3726 6713 2.752030 TGATGGTGGAGGAAGAGGTAG 58.248 52.381 0.00 0.00 0.00 3.18
3727 6714 1.414550 GATGGTGGAGGAAGAGGTAGC 59.585 57.143 0.00 0.00 0.00 3.58
3728 6715 0.413832 TGGTGGAGGAAGAGGTAGCT 59.586 55.000 0.00 0.00 0.00 3.32
3729 6716 1.116308 GGTGGAGGAAGAGGTAGCTC 58.884 60.000 14.19 14.19 0.00 4.09
3730 6717 1.342574 GGTGGAGGAAGAGGTAGCTCT 60.343 57.143 18.72 18.72 34.76 4.09
3731 6718 2.462723 GTGGAGGAAGAGGTAGCTCTT 58.537 52.381 31.84 31.84 45.36 2.85
3738 6725 2.614134 AGAGGTAGCTCTTCAGGTGT 57.386 50.000 18.72 0.00 0.00 4.16
3739 6726 2.452505 AGAGGTAGCTCTTCAGGTGTC 58.547 52.381 18.72 0.00 0.00 3.67
3740 6727 1.133407 GAGGTAGCTCTTCAGGTGTCG 59.867 57.143 14.73 0.00 0.00 4.35
3741 6728 0.173708 GGTAGCTCTTCAGGTGTCGG 59.826 60.000 0.00 0.00 0.00 4.79
3742 6729 0.173708 GTAGCTCTTCAGGTGTCGGG 59.826 60.000 0.00 0.00 0.00 5.14
3743 6730 1.605058 TAGCTCTTCAGGTGTCGGGC 61.605 60.000 0.00 0.00 0.00 6.13
3744 6731 2.948720 GCTCTTCAGGTGTCGGGCT 61.949 63.158 0.00 0.00 0.00 5.19
3745 6732 1.079543 CTCTTCAGGTGTCGGGCTG 60.080 63.158 0.00 0.00 0.00 4.85
3746 6733 2.743928 CTTCAGGTGTCGGGCTGC 60.744 66.667 0.00 0.00 0.00 5.25
3747 6734 4.329545 TTCAGGTGTCGGGCTGCC 62.330 66.667 11.05 11.05 0.00 4.85
3757 6744 4.828296 GGGCTGCCAGTGGGGATG 62.828 72.222 22.05 0.00 40.01 3.51
3758 6745 3.731728 GGCTGCCAGTGGGGATGA 61.732 66.667 15.17 0.00 40.01 2.92
3759 6746 2.439156 GCTGCCAGTGGGGATGAC 60.439 66.667 12.15 0.00 40.01 3.06
3760 6747 2.273449 CTGCCAGTGGGGATGACC 59.727 66.667 12.15 0.00 40.01 4.02
3761 6748 3.687321 CTGCCAGTGGGGATGACCG 62.687 68.421 12.15 0.00 41.60 4.79
3762 6749 3.717294 GCCAGTGGGGATGACCGT 61.717 66.667 12.15 0.00 41.60 4.83
3763 6750 2.268920 CCAGTGGGGATGACCGTG 59.731 66.667 0.00 0.00 41.60 4.94
3764 6751 2.268920 CAGTGGGGATGACCGTGG 59.731 66.667 0.00 0.00 41.60 4.94
3765 6752 2.203938 AGTGGGGATGACCGTGGT 60.204 61.111 0.00 0.00 41.60 4.16
3766 6753 2.046314 GTGGGGATGACCGTGGTG 60.046 66.667 0.00 0.00 41.60 4.17
3767 6754 3.326578 TGGGGATGACCGTGGTGG 61.327 66.667 0.00 0.00 46.41 4.61
3768 6755 4.796495 GGGGATGACCGTGGTGGC 62.796 72.222 0.00 0.00 43.94 5.01
3769 6756 4.796495 GGGATGACCGTGGTGGCC 62.796 72.222 0.00 0.00 43.94 5.36
3771 6758 4.077184 GATGACCGTGGTGGCCGA 62.077 66.667 0.00 0.00 43.94 5.54
3772 6759 4.388499 ATGACCGTGGTGGCCGAC 62.388 66.667 0.00 0.00 43.94 4.79
3786 6773 4.838152 CGACCATGGTGGCGGAGG 62.838 72.222 25.52 0.00 42.67 4.30
3797 6784 2.423446 GCGGAGGCATGGGTCTAG 59.577 66.667 0.00 0.00 39.62 2.43
3798 6785 2.423446 CGGAGGCATGGGTCTAGC 59.577 66.667 0.00 0.00 0.00 3.42
3802 6789 3.647367 GGCATGGGTCTAGCCTGA 58.353 61.111 0.00 0.00 44.92 3.86
3803 6790 1.449353 GGCATGGGTCTAGCCTGAG 59.551 63.158 0.00 0.00 44.92 3.35
3804 6791 1.227793 GCATGGGTCTAGCCTGAGC 60.228 63.158 0.00 0.00 37.43 4.26
3805 6792 1.068753 CATGGGTCTAGCCTGAGCG 59.931 63.158 0.00 0.00 46.67 5.03
3806 6793 1.381872 ATGGGTCTAGCCTGAGCGT 60.382 57.895 0.00 0.00 46.67 5.07
3807 6794 1.680522 ATGGGTCTAGCCTGAGCGTG 61.681 60.000 0.00 0.00 46.67 5.34
3808 6795 2.496817 GGTCTAGCCTGAGCGTGG 59.503 66.667 0.00 0.00 46.67 4.94
3826 6813 3.314331 CCACTGGCGGTGTCCTCT 61.314 66.667 24.01 0.00 43.94 3.69
3827 6814 2.743718 CACTGGCGGTGTCCTCTT 59.256 61.111 18.40 0.00 40.79 2.85
3828 6815 1.374758 CACTGGCGGTGTCCTCTTC 60.375 63.158 18.40 0.00 40.79 2.87
3829 6816 1.534235 ACTGGCGGTGTCCTCTTCT 60.534 57.895 0.00 0.00 0.00 2.85
3830 6817 1.079543 CTGGCGGTGTCCTCTTCTG 60.080 63.158 0.00 0.00 0.00 3.02
3831 6818 1.821061 CTGGCGGTGTCCTCTTCTGT 61.821 60.000 0.00 0.00 0.00 3.41
3832 6819 1.374758 GGCGGTGTCCTCTTCTGTG 60.375 63.158 0.00 0.00 0.00 3.66
3833 6820 1.374758 GCGGTGTCCTCTTCTGTGG 60.375 63.158 0.00 0.00 0.00 4.17
3834 6821 1.374758 CGGTGTCCTCTTCTGTGGC 60.375 63.158 0.00 0.00 0.00 5.01
3835 6822 1.821061 CGGTGTCCTCTTCTGTGGCT 61.821 60.000 0.00 0.00 0.00 4.75
3836 6823 0.321122 GGTGTCCTCTTCTGTGGCTG 60.321 60.000 0.00 0.00 0.00 4.85
3837 6824 0.321122 GTGTCCTCTTCTGTGGCTGG 60.321 60.000 0.00 0.00 0.00 4.85
3838 6825 0.764369 TGTCCTCTTCTGTGGCTGGT 60.764 55.000 0.00 0.00 0.00 4.00
3839 6826 0.398318 GTCCTCTTCTGTGGCTGGTT 59.602 55.000 0.00 0.00 0.00 3.67
3840 6827 0.397941 TCCTCTTCTGTGGCTGGTTG 59.602 55.000 0.00 0.00 0.00 3.77
3841 6828 0.607489 CCTCTTCTGTGGCTGGTTGG 60.607 60.000 0.00 0.00 0.00 3.77
3842 6829 0.397941 CTCTTCTGTGGCTGGTTGGA 59.602 55.000 0.00 0.00 0.00 3.53
3843 6830 0.397941 TCTTCTGTGGCTGGTTGGAG 59.602 55.000 0.00 0.00 0.00 3.86
3844 6831 0.397941 CTTCTGTGGCTGGTTGGAGA 59.602 55.000 0.00 0.00 0.00 3.71
3845 6832 0.108585 TTCTGTGGCTGGTTGGAGAC 59.891 55.000 0.00 0.00 0.00 3.36
3846 6833 1.053835 TCTGTGGCTGGTTGGAGACA 61.054 55.000 0.00 0.00 39.83 3.41
3847 6834 0.604780 CTGTGGCTGGTTGGAGACAG 60.605 60.000 0.00 0.00 44.54 3.51
3848 6835 1.053835 TGTGGCTGGTTGGAGACAGA 61.054 55.000 0.00 0.00 44.54 3.41
3849 6836 0.321122 GTGGCTGGTTGGAGACAGAG 60.321 60.000 0.00 0.00 44.54 3.35
3850 6837 0.471780 TGGCTGGTTGGAGACAGAGA 60.472 55.000 0.00 0.00 44.54 3.10
3851 6838 0.687354 GGCTGGTTGGAGACAGAGAA 59.313 55.000 0.00 0.00 44.54 2.87
3852 6839 1.072331 GGCTGGTTGGAGACAGAGAAA 59.928 52.381 0.00 0.00 44.54 2.52
3853 6840 2.421619 GCTGGTTGGAGACAGAGAAAG 58.578 52.381 0.00 0.00 44.54 2.62
3854 6841 2.037772 GCTGGTTGGAGACAGAGAAAGA 59.962 50.000 0.00 0.00 44.54 2.52
3855 6842 3.864160 GCTGGTTGGAGACAGAGAAAGAG 60.864 52.174 0.00 0.00 44.54 2.85
3856 6843 3.576118 CTGGTTGGAGACAGAGAAAGAGA 59.424 47.826 0.00 0.00 44.54 3.10
3857 6844 3.576118 TGGTTGGAGACAGAGAAAGAGAG 59.424 47.826 0.00 0.00 44.54 3.20
3858 6845 3.829601 GGTTGGAGACAGAGAAAGAGAGA 59.170 47.826 0.00 0.00 44.54 3.10
3859 6846 4.282195 GGTTGGAGACAGAGAAAGAGAGAA 59.718 45.833 0.00 0.00 44.54 2.87
3860 6847 5.221541 GGTTGGAGACAGAGAAAGAGAGAAA 60.222 44.000 0.00 0.00 44.54 2.52
3861 6848 5.720371 TGGAGACAGAGAAAGAGAGAAAG 57.280 43.478 0.00 0.00 35.01 2.62
3862 6849 5.389520 TGGAGACAGAGAAAGAGAGAAAGA 58.610 41.667 0.00 0.00 35.01 2.52
3863 6850 6.015918 TGGAGACAGAGAAAGAGAGAAAGAT 58.984 40.000 0.00 0.00 35.01 2.40
3864 6851 7.178573 TGGAGACAGAGAAAGAGAGAAAGATA 58.821 38.462 0.00 0.00 35.01 1.98
3865 6852 7.339212 TGGAGACAGAGAAAGAGAGAAAGATAG 59.661 40.741 0.00 0.00 35.01 2.08
3866 6853 7.556275 GGAGACAGAGAAAGAGAGAAAGATAGA 59.444 40.741 0.00 0.00 0.00 1.98
3867 6854 8.511604 AGACAGAGAAAGAGAGAAAGATAGAG 57.488 38.462 0.00 0.00 0.00 2.43
3868 6855 7.067494 AGACAGAGAAAGAGAGAAAGATAGAGC 59.933 40.741 0.00 0.00 0.00 4.09
3869 6856 6.891908 ACAGAGAAAGAGAGAAAGATAGAGCT 59.108 38.462 0.00 0.00 0.00 4.09
3870 6857 7.148018 ACAGAGAAAGAGAGAAAGATAGAGCTG 60.148 40.741 0.00 0.00 0.00 4.24
3871 6858 7.067372 CAGAGAAAGAGAGAAAGATAGAGCTGA 59.933 40.741 0.00 0.00 0.00 4.26
3872 6859 7.284034 AGAGAAAGAGAGAAAGATAGAGCTGAG 59.716 40.741 0.00 0.00 0.00 3.35
3873 6860 6.322201 AGAAAGAGAGAAAGATAGAGCTGAGG 59.678 42.308 0.00 0.00 0.00 3.86
3874 6861 5.387113 AGAGAGAAAGATAGAGCTGAGGA 57.613 43.478 0.00 0.00 0.00 3.71
3875 6862 5.765510 AGAGAGAAAGATAGAGCTGAGGAA 58.234 41.667 0.00 0.00 0.00 3.36
3876 6863 5.829924 AGAGAGAAAGATAGAGCTGAGGAAG 59.170 44.000 0.00 0.00 0.00 3.46
3877 6864 5.765510 AGAGAAAGATAGAGCTGAGGAAGA 58.234 41.667 0.00 0.00 0.00 2.87
3878 6865 6.194235 AGAGAAAGATAGAGCTGAGGAAGAA 58.806 40.000 0.00 0.00 0.00 2.52
3879 6866 6.322201 AGAGAAAGATAGAGCTGAGGAAGAAG 59.678 42.308 0.00 0.00 0.00 2.85
3880 6867 5.363580 AGAAAGATAGAGCTGAGGAAGAAGG 59.636 44.000 0.00 0.00 0.00 3.46
3881 6868 4.534647 AGATAGAGCTGAGGAAGAAGGA 57.465 45.455 0.00 0.00 0.00 3.36
3882 6869 4.473444 AGATAGAGCTGAGGAAGAAGGAG 58.527 47.826 0.00 0.00 0.00 3.69
3883 6870 1.864669 AGAGCTGAGGAAGAAGGAGG 58.135 55.000 0.00 0.00 0.00 4.30
3884 6871 1.078656 AGAGCTGAGGAAGAAGGAGGT 59.921 52.381 0.00 0.00 0.00 3.85
3885 6872 1.206849 GAGCTGAGGAAGAAGGAGGTG 59.793 57.143 0.00 0.00 0.00 4.00
3886 6873 0.392327 GCTGAGGAAGAAGGAGGTGC 60.392 60.000 0.00 0.00 0.00 5.01
3887 6874 0.108424 CTGAGGAAGAAGGAGGTGCG 60.108 60.000 0.00 0.00 0.00 5.34
3888 6875 0.832135 TGAGGAAGAAGGAGGTGCGT 60.832 55.000 0.00 0.00 0.00 5.24
3889 6876 0.390472 GAGGAAGAAGGAGGTGCGTG 60.390 60.000 0.00 0.00 0.00 5.34
3890 6877 0.832135 AGGAAGAAGGAGGTGCGTGA 60.832 55.000 0.00 0.00 0.00 4.35
3891 6878 0.390472 GGAAGAAGGAGGTGCGTGAG 60.390 60.000 0.00 0.00 0.00 3.51
3892 6879 0.390472 GAAGAAGGAGGTGCGTGAGG 60.390 60.000 0.00 0.00 0.00 3.86
3893 6880 0.832135 AAGAAGGAGGTGCGTGAGGA 60.832 55.000 0.00 0.00 0.00 3.71
3894 6881 0.616111 AGAAGGAGGTGCGTGAGGAT 60.616 55.000 0.00 0.00 0.00 3.24
3895 6882 0.460987 GAAGGAGGTGCGTGAGGATG 60.461 60.000 0.00 0.00 0.00 3.51
3896 6883 0.904865 AAGGAGGTGCGTGAGGATGA 60.905 55.000 0.00 0.00 0.00 2.92
3897 6884 1.153549 GGAGGTGCGTGAGGATGAC 60.154 63.158 0.00 0.00 0.00 3.06
3898 6885 1.591703 GAGGTGCGTGAGGATGACA 59.408 57.895 0.00 0.00 0.00 3.58
3899 6886 0.459237 GAGGTGCGTGAGGATGACAG 60.459 60.000 0.00 0.00 0.00 3.51
3900 6887 0.900182 AGGTGCGTGAGGATGACAGA 60.900 55.000 0.00 0.00 0.00 3.41
3901 6888 0.176680 GGTGCGTGAGGATGACAGAT 59.823 55.000 0.00 0.00 0.00 2.90
3902 6889 1.284657 GTGCGTGAGGATGACAGATG 58.715 55.000 0.00 0.00 0.00 2.90
3903 6890 0.176449 TGCGTGAGGATGACAGATGG 59.824 55.000 0.00 0.00 0.00 3.51
3904 6891 0.531532 GCGTGAGGATGACAGATGGG 60.532 60.000 0.00 0.00 0.00 4.00
3905 6892 1.114627 CGTGAGGATGACAGATGGGA 58.885 55.000 0.00 0.00 0.00 4.37
3906 6893 1.202463 CGTGAGGATGACAGATGGGAC 60.202 57.143 0.00 0.00 0.00 4.46
3907 6894 1.139853 GTGAGGATGACAGATGGGACC 59.860 57.143 0.00 0.00 0.00 4.46
3908 6895 1.008815 TGAGGATGACAGATGGGACCT 59.991 52.381 0.00 0.00 0.00 3.85
3909 6896 2.247372 TGAGGATGACAGATGGGACCTA 59.753 50.000 0.00 0.00 0.00 3.08
3910 6897 3.116590 TGAGGATGACAGATGGGACCTAT 60.117 47.826 0.00 0.00 0.00 2.57
3911 6898 3.246301 AGGATGACAGATGGGACCTATG 58.754 50.000 0.00 0.00 0.00 2.23
3912 6899 2.975489 GGATGACAGATGGGACCTATGT 59.025 50.000 0.00 0.00 0.00 2.29
3913 6900 3.007398 GGATGACAGATGGGACCTATGTC 59.993 52.174 0.00 0.00 40.49 3.06
3923 6910 1.490574 GACCTATGTCCACCTCAGCT 58.509 55.000 0.00 0.00 35.34 4.24
3924 6911 2.667470 GACCTATGTCCACCTCAGCTA 58.333 52.381 0.00 0.00 35.34 3.32
3925 6912 3.031736 GACCTATGTCCACCTCAGCTAA 58.968 50.000 0.00 0.00 35.34 3.09
3926 6913 3.643792 GACCTATGTCCACCTCAGCTAAT 59.356 47.826 0.00 0.00 35.34 1.73
3927 6914 4.040755 ACCTATGTCCACCTCAGCTAATT 58.959 43.478 0.00 0.00 0.00 1.40
3928 6915 4.141620 ACCTATGTCCACCTCAGCTAATTG 60.142 45.833 0.00 0.00 0.00 2.32
3929 6916 2.113860 TGTCCACCTCAGCTAATTGC 57.886 50.000 0.00 0.00 43.29 3.56
3930 6917 1.350684 TGTCCACCTCAGCTAATTGCA 59.649 47.619 0.00 0.00 45.94 4.08
3931 6918 2.012673 GTCCACCTCAGCTAATTGCAG 58.987 52.381 0.00 0.00 45.94 4.41
3932 6919 1.908619 TCCACCTCAGCTAATTGCAGA 59.091 47.619 0.00 0.00 45.94 4.26
3933 6920 2.507058 TCCACCTCAGCTAATTGCAGAT 59.493 45.455 0.00 0.00 45.94 2.90
3934 6921 3.711190 TCCACCTCAGCTAATTGCAGATA 59.289 43.478 0.00 0.00 45.94 1.98
3935 6922 4.063689 CCACCTCAGCTAATTGCAGATAG 58.936 47.826 0.00 4.03 45.94 2.08
3936 6923 4.063689 CACCTCAGCTAATTGCAGATAGG 58.936 47.826 9.18 0.00 45.94 2.57
3937 6924 3.072944 CCTCAGCTAATTGCAGATAGGC 58.927 50.000 9.18 2.31 45.94 3.93
3938 6925 3.495629 CCTCAGCTAATTGCAGATAGGCA 60.496 47.826 9.18 0.00 45.94 4.75
3939 6926 4.325119 CTCAGCTAATTGCAGATAGGCAT 58.675 43.478 9.18 0.00 44.48 4.40
3940 6927 4.070009 TCAGCTAATTGCAGATAGGCATG 58.930 43.478 9.18 0.00 44.48 4.06
3941 6928 2.818432 AGCTAATTGCAGATAGGCATGC 59.182 45.455 9.90 9.90 44.48 4.06
3942 6929 2.094854 GCTAATTGCAGATAGGCATGCC 60.095 50.000 30.12 30.12 44.48 4.40
3943 6930 2.076207 AATTGCAGATAGGCATGCCA 57.924 45.000 37.18 23.40 44.48 4.92
3944 6931 1.325355 ATTGCAGATAGGCATGCCAC 58.675 50.000 37.18 25.98 44.48 5.01
3945 6932 0.034283 TTGCAGATAGGCATGCCACA 60.034 50.000 37.18 24.90 44.48 4.17
3946 6933 0.184211 TGCAGATAGGCATGCCACAT 59.816 50.000 37.18 28.25 41.85 3.21
3947 6934 1.325355 GCAGATAGGCATGCCACATT 58.675 50.000 37.18 19.98 38.92 2.71
3948 6935 1.000607 GCAGATAGGCATGCCACATTG 60.001 52.381 37.18 27.53 38.92 2.82
3949 6936 2.304092 CAGATAGGCATGCCACATTGT 58.696 47.619 37.18 18.83 38.92 2.71
3950 6937 2.292569 CAGATAGGCATGCCACATTGTC 59.707 50.000 37.18 23.18 38.92 3.18
3951 6938 2.174210 AGATAGGCATGCCACATTGTCT 59.826 45.455 37.18 24.93 38.92 3.41
3952 6939 2.512692 TAGGCATGCCACATTGTCTT 57.487 45.000 37.18 16.55 38.92 3.01
3953 6940 0.892755 AGGCATGCCACATTGTCTTG 59.107 50.000 37.18 0.00 38.92 3.02
3954 6941 0.889994 GGCATGCCACATTGTCTTGA 59.110 50.000 32.08 0.00 35.81 3.02
3955 6942 1.479323 GGCATGCCACATTGTCTTGAT 59.521 47.619 32.08 0.00 35.81 2.57
3956 6943 2.689471 GGCATGCCACATTGTCTTGATA 59.311 45.455 32.08 0.00 35.81 2.15
3957 6944 3.243301 GGCATGCCACATTGTCTTGATAG 60.243 47.826 32.08 0.00 35.81 2.08
3958 6945 3.243301 GCATGCCACATTGTCTTGATAGG 60.243 47.826 6.36 0.00 0.00 2.57
3959 6946 3.719268 TGCCACATTGTCTTGATAGGT 57.281 42.857 0.00 0.00 0.00 3.08
3960 6947 3.346315 TGCCACATTGTCTTGATAGGTG 58.654 45.455 0.00 0.00 0.00 4.00
3961 6948 2.684881 GCCACATTGTCTTGATAGGTGG 59.315 50.000 0.00 0.00 45.37 4.61
3962 6949 3.282021 CCACATTGTCTTGATAGGTGGG 58.718 50.000 0.00 0.00 40.38 4.61
3963 6950 2.684881 CACATTGTCTTGATAGGTGGGC 59.315 50.000 0.00 0.00 0.00 5.36
3964 6951 2.301346 CATTGTCTTGATAGGTGGGCC 58.699 52.381 0.00 0.00 0.00 5.80
3965 6952 0.623723 TTGTCTTGATAGGTGGGCCC 59.376 55.000 17.59 17.59 34.57 5.80
3973 6960 2.285442 AGGTGGGCCCTACCTGTC 60.285 66.667 32.90 14.58 46.48 3.51
3974 6961 2.609610 GGTGGGCCCTACCTGTCA 60.610 66.667 27.18 3.22 39.10 3.58
3975 6962 2.670148 GGTGGGCCCTACCTGTCAG 61.670 68.421 27.18 0.00 39.10 3.51
3976 6963 1.918800 GTGGGCCCTACCTGTCAGT 60.919 63.158 25.70 0.00 39.10 3.41
3977 6964 1.151899 TGGGCCCTACCTGTCAGTT 60.152 57.895 25.70 0.00 39.10 3.16
3978 6965 0.770557 TGGGCCCTACCTGTCAGTTT 60.771 55.000 25.70 0.00 39.10 2.66
3979 6966 0.035343 GGGCCCTACCTGTCAGTTTC 60.035 60.000 17.04 0.00 39.10 2.78
3980 6967 0.690762 GGCCCTACCTGTCAGTTTCA 59.309 55.000 0.00 0.00 34.51 2.69
3981 6968 1.610886 GGCCCTACCTGTCAGTTTCAC 60.611 57.143 0.00 0.00 34.51 3.18
3982 6969 1.348036 GCCCTACCTGTCAGTTTCACT 59.652 52.381 0.00 0.00 0.00 3.41
3983 6970 5.985724 GGCCCTACCTGTCAGTTTCACTG 62.986 56.522 0.00 0.00 40.72 3.66
3984 6971 2.368875 CCCTACCTGTCAGTTTCACTGT 59.631 50.000 3.87 0.00 46.03 3.55
3985 6972 3.181454 CCCTACCTGTCAGTTTCACTGTT 60.181 47.826 3.87 0.00 46.03 3.16
3986 6973 4.451900 CCTACCTGTCAGTTTCACTGTTT 58.548 43.478 3.87 0.00 46.03 2.83
3987 6974 4.881850 CCTACCTGTCAGTTTCACTGTTTT 59.118 41.667 3.87 0.00 46.03 2.43
3988 6975 4.965119 ACCTGTCAGTTTCACTGTTTTC 57.035 40.909 3.87 0.00 46.03 2.29
3989 6976 3.374058 ACCTGTCAGTTTCACTGTTTTCG 59.626 43.478 3.87 0.00 46.03 3.46
3990 6977 3.374058 CCTGTCAGTTTCACTGTTTTCGT 59.626 43.478 3.87 0.00 46.03 3.85
3991 6978 4.334443 CTGTCAGTTTCACTGTTTTCGTG 58.666 43.478 3.87 0.00 46.03 4.35
3992 6979 3.997681 TGTCAGTTTCACTGTTTTCGTGA 59.002 39.130 3.87 0.00 46.03 4.35
3993 6980 4.092821 TGTCAGTTTCACTGTTTTCGTGAG 59.907 41.667 3.87 0.00 46.03 3.51
3994 6981 4.092968 GTCAGTTTCACTGTTTTCGTGAGT 59.907 41.667 3.87 0.00 46.03 3.41
3995 6982 5.290158 GTCAGTTTCACTGTTTTCGTGAGTA 59.710 40.000 3.87 0.00 46.03 2.59
3996 6983 5.870433 TCAGTTTCACTGTTTTCGTGAGTAA 59.130 36.000 3.87 0.00 46.03 2.24
3997 6984 6.369340 TCAGTTTCACTGTTTTCGTGAGTAAA 59.631 34.615 3.87 0.00 46.03 2.01
3998 6985 7.065324 TCAGTTTCACTGTTTTCGTGAGTAAAT 59.935 33.333 3.87 0.00 46.03 1.40
3999 6986 7.696453 CAGTTTCACTGTTTTCGTGAGTAAATT 59.304 33.333 0.00 0.00 41.19 1.82
4000 6987 7.908601 AGTTTCACTGTTTTCGTGAGTAAATTC 59.091 33.333 0.00 0.00 41.85 2.17
4001 6988 5.969741 TCACTGTTTTCGTGAGTAAATTCG 58.030 37.500 0.00 0.00 36.54 3.34
4002 6989 5.749588 TCACTGTTTTCGTGAGTAAATTCGA 59.250 36.000 0.00 0.00 36.54 3.71
4003 6990 5.839239 CACTGTTTTCGTGAGTAAATTCGAC 59.161 40.000 0.00 0.00 33.01 4.20
4004 6991 4.997107 TGTTTTCGTGAGTAAATTCGACG 58.003 39.130 0.00 0.00 33.01 5.12
4005 6992 4.739228 TGTTTTCGTGAGTAAATTCGACGA 59.261 37.500 0.00 0.00 37.28 4.20
4006 6993 5.108141 TGTTTTCGTGAGTAAATTCGACGAG 60.108 40.000 0.00 0.00 39.93 4.18
4007 6994 3.818961 TCGTGAGTAAATTCGACGAGT 57.181 42.857 0.00 0.00 34.32 4.18
4008 6995 3.485633 TCGTGAGTAAATTCGACGAGTG 58.514 45.455 0.00 0.00 34.32 3.51
4009 6996 2.026507 CGTGAGTAAATTCGACGAGTGC 59.973 50.000 0.00 0.00 31.71 4.40
4010 6997 3.243336 GTGAGTAAATTCGACGAGTGCT 58.757 45.455 0.00 0.00 0.00 4.40
4011 6998 3.301116 GTGAGTAAATTCGACGAGTGCTC 59.699 47.826 12.97 12.97 0.00 4.26
4027 7014 5.455056 AGTGCTCGACATTATAGGTTAGG 57.545 43.478 0.00 0.00 0.00 2.69
4028 7015 3.988517 GTGCTCGACATTATAGGTTAGGC 59.011 47.826 0.00 0.00 0.00 3.93
4029 7016 3.243336 GCTCGACATTATAGGTTAGGCG 58.757 50.000 0.00 0.00 0.00 5.52
4030 7017 3.243336 CTCGACATTATAGGTTAGGCGC 58.757 50.000 0.00 0.00 0.00 6.53
4031 7018 2.624364 TCGACATTATAGGTTAGGCGCA 59.376 45.455 10.83 0.00 0.00 6.09
4032 7019 3.257375 TCGACATTATAGGTTAGGCGCAT 59.743 43.478 10.83 3.98 0.00 4.73
4033 7020 4.460034 TCGACATTATAGGTTAGGCGCATA 59.540 41.667 10.83 2.52 0.00 3.14
4034 7021 5.047872 TCGACATTATAGGTTAGGCGCATAA 60.048 40.000 10.97 10.97 0.00 1.90
4035 7022 5.810587 CGACATTATAGGTTAGGCGCATAAT 59.189 40.000 18.34 9.18 0.00 1.28
4036 7023 6.312918 CGACATTATAGGTTAGGCGCATAATT 59.687 38.462 18.34 11.76 0.00 1.40
4037 7024 7.377766 ACATTATAGGTTAGGCGCATAATTG 57.622 36.000 18.34 9.38 0.00 2.32
4038 7025 6.374333 ACATTATAGGTTAGGCGCATAATTGG 59.626 38.462 18.34 4.43 0.00 3.16
4039 7026 2.729028 AGGTTAGGCGCATAATTGGT 57.271 45.000 18.34 0.29 0.00 3.67
4040 7027 2.297701 AGGTTAGGCGCATAATTGGTG 58.702 47.619 18.34 0.00 0.00 4.17
4041 7028 1.336755 GGTTAGGCGCATAATTGGTGG 59.663 52.381 18.34 0.00 0.00 4.61
4042 7029 2.021457 GTTAGGCGCATAATTGGTGGT 58.979 47.619 18.34 0.00 0.00 4.16
4043 7030 2.425668 GTTAGGCGCATAATTGGTGGTT 59.574 45.455 18.34 0.00 0.00 3.67
4044 7031 1.555967 AGGCGCATAATTGGTGGTTT 58.444 45.000 10.83 0.00 0.00 3.27
4045 7032 1.899142 AGGCGCATAATTGGTGGTTTT 59.101 42.857 10.83 0.00 0.00 2.43
4046 7033 2.301583 AGGCGCATAATTGGTGGTTTTT 59.698 40.909 10.83 0.00 0.00 1.94
4079 7066 4.664150 CCAAATGTGGTACCAAGTTGTT 57.336 40.909 18.31 3.98 40.42 2.83
4080 7067 5.776173 CCAAATGTGGTACCAAGTTGTTA 57.224 39.130 18.31 0.00 40.42 2.41
4081 7068 5.525199 CCAAATGTGGTACCAAGTTGTTAC 58.475 41.667 18.31 1.61 40.42 2.50
4082 7069 5.508320 CCAAATGTGGTACCAAGTTGTTACC 60.508 44.000 18.31 19.82 40.42 2.85
4083 7070 3.211718 TGTGGTACCAAGTTGTTACCC 57.788 47.619 22.69 15.64 0.00 3.69
4084 7071 2.778850 TGTGGTACCAAGTTGTTACCCT 59.221 45.455 22.69 0.00 0.00 4.34
4085 7072 3.972638 TGTGGTACCAAGTTGTTACCCTA 59.027 43.478 22.69 11.55 0.00 3.53
4086 7073 4.040706 TGTGGTACCAAGTTGTTACCCTAG 59.959 45.833 22.69 0.00 0.00 3.02
4087 7074 3.008266 TGGTACCAAGTTGTTACCCTAGC 59.992 47.826 22.69 2.78 0.00 3.42
4088 7075 3.262660 GGTACCAAGTTGTTACCCTAGCT 59.737 47.826 16.72 0.00 0.00 3.32
4089 7076 3.697619 ACCAAGTTGTTACCCTAGCTC 57.302 47.619 1.45 0.00 0.00 4.09
4090 7077 2.976882 ACCAAGTTGTTACCCTAGCTCA 59.023 45.455 1.45 0.00 0.00 4.26
4091 7078 3.393278 ACCAAGTTGTTACCCTAGCTCAA 59.607 43.478 1.45 0.00 0.00 3.02
4092 7079 4.003648 CCAAGTTGTTACCCTAGCTCAAG 58.996 47.826 1.45 0.00 0.00 3.02
4093 7080 4.505039 CCAAGTTGTTACCCTAGCTCAAGT 60.505 45.833 1.45 0.00 0.00 3.16
4094 7081 4.273148 AGTTGTTACCCTAGCTCAAGTG 57.727 45.455 0.00 0.00 0.00 3.16
4095 7082 3.646637 AGTTGTTACCCTAGCTCAAGTGT 59.353 43.478 0.00 0.00 0.00 3.55
4096 7083 3.678056 TGTTACCCTAGCTCAAGTGTG 57.322 47.619 0.00 0.00 0.00 3.82
4097 7084 3.236047 TGTTACCCTAGCTCAAGTGTGA 58.764 45.455 0.00 0.00 0.00 3.58
4098 7085 3.838317 TGTTACCCTAGCTCAAGTGTGAT 59.162 43.478 0.00 0.00 31.85 3.06
4099 7086 4.184629 GTTACCCTAGCTCAAGTGTGATG 58.815 47.826 0.00 0.00 31.85 3.07
4100 7087 1.556911 ACCCTAGCTCAAGTGTGATGG 59.443 52.381 0.00 0.00 31.85 3.51
4101 7088 1.556911 CCCTAGCTCAAGTGTGATGGT 59.443 52.381 0.00 0.00 31.85 3.55
4102 7089 2.419297 CCCTAGCTCAAGTGTGATGGTC 60.419 54.545 0.00 0.00 31.85 4.02
4103 7090 2.499289 CCTAGCTCAAGTGTGATGGTCT 59.501 50.000 0.00 0.00 31.85 3.85
4104 7091 3.055530 CCTAGCTCAAGTGTGATGGTCTT 60.056 47.826 0.00 0.00 31.85 3.01
4105 7092 2.775890 AGCTCAAGTGTGATGGTCTTG 58.224 47.619 0.00 0.00 39.59 3.02
4107 7094 1.462283 CTCAAGTGTGATGGTCTTGCG 59.538 52.381 0.00 0.00 38.56 4.85
4122 7109 7.395190 TGGTCTTGCGTAAATAGTTCTAGTA 57.605 36.000 0.00 0.00 0.00 1.82
4233 7307 5.069119 GGAAATGGAGAAAACACAAGACCTT 59.931 40.000 0.00 0.00 0.00 3.50
4247 7321 5.476599 CACAAGACCTTTTATGAACATGGGA 59.523 40.000 0.00 0.00 0.00 4.37
4285 7359 6.101332 CCATGATCACGAATTTCCATTTGTT 58.899 36.000 0.00 0.00 35.10 2.83
4449 7547 9.214957 TGTTCGTATGACATTGAATCTAAGTTT 57.785 29.630 0.00 0.00 0.00 2.66
4705 16481 5.625150 ACATAGTAAGGCCTCATGATTTCC 58.375 41.667 5.23 0.00 0.00 3.13
4708 16484 5.559148 AGTAAGGCCTCATGATTTCCTAG 57.441 43.478 5.23 0.00 0.00 3.02
4838 16616 4.382147 GGACTTCTGTATCTCCACCAAGAC 60.382 50.000 0.00 0.00 0.00 3.01
4868 16646 6.929625 ACTGACTATAATTCATCGGGATCTG 58.070 40.000 0.00 0.00 0.00 2.90
4913 16691 6.973642 AGATGGAGAAATGAAACCCAAGATA 58.026 36.000 0.00 0.00 0.00 1.98
4925 16703 1.876156 CCCAAGATAGCAGATTTCGGC 59.124 52.381 0.00 0.00 37.32 5.54
4937 16715 0.466189 ATTTCGGCATGGCGAGGATT 60.466 50.000 37.52 23.17 0.00 3.01
4993 16771 2.928116 GTGTCGTGGGAACATAGTAAGC 59.072 50.000 0.00 0.00 46.14 3.09
5001 16780 5.007682 TGGGAACATAGTAAGCAACCTTTC 58.992 41.667 0.00 0.00 33.40 2.62
5061 16840 5.010282 ACCCCATTCACTAATTCTTGTGAC 58.990 41.667 7.93 0.00 42.06 3.67
5280 17077 6.956202 AGCAATAGATCCAGATTTTGAAGG 57.044 37.500 0.00 0.00 0.00 3.46
5318 17119 9.696917 ACTTTCAATTTTTCAGTCATGGAATAC 57.303 29.630 0.00 0.00 0.00 1.89
5355 17156 2.569404 GACAGAGGAATTGGTGGACTCT 59.431 50.000 0.00 0.00 38.96 3.24
5356 17157 2.983229 CAGAGGAATTGGTGGACTCTG 58.017 52.381 5.71 5.71 46.09 3.35
5475 17276 5.924356 TCATCAGTTGTGTTTGTCCTAGAA 58.076 37.500 0.00 0.00 0.00 2.10
5533 17340 1.667756 CCTACTTTACACGACAGCGCA 60.668 52.381 11.47 0.00 42.48 6.09
5591 17404 3.685139 TGGGAACAGCTTTACTCTCAG 57.315 47.619 0.00 0.00 35.01 3.35
5674 17487 5.999483 CGATAGTCGTCATCCATTGTATG 57.001 43.478 0.00 0.00 34.72 2.39
5698 17511 7.847096 TGGAAGTCACTATATCTTGCTTTGTA 58.153 34.615 0.00 0.00 32.31 2.41
5735 17548 4.599047 TTGTTTGCCTTATTGACTTGGG 57.401 40.909 0.00 0.00 0.00 4.12
5738 17551 5.575157 TGTTTGCCTTATTGACTTGGGATA 58.425 37.500 0.00 0.00 0.00 2.59
5844 17659 4.219944 TGACTCGTTTACTGCTCATAACCT 59.780 41.667 0.00 0.00 0.00 3.50
5861 17676 6.549364 TCATAACCTTGTTCACAAACCTTGAT 59.451 34.615 0.00 0.00 35.15 2.57
5864 17679 4.339247 ACCTTGTTCACAAACCTTGATCAG 59.661 41.667 0.00 0.00 35.15 2.90
5872 17687 4.394300 CACAAACCTTGATCAGATCCTGAC 59.606 45.833 8.00 0.00 43.63 3.51
5873 17688 3.533606 AACCTTGATCAGATCCTGACG 57.466 47.619 8.00 0.00 43.63 4.35
5887 17702 1.726791 CCTGACGAATTTGTCTGTCCG 59.273 52.381 23.32 9.38 39.64 4.79
5896 17711 6.814644 ACGAATTTGTCTGTCCGTAATCATTA 59.185 34.615 0.00 0.00 0.00 1.90
5902 17717 6.792326 TGTCTGTCCGTAATCATTACAGTAG 58.208 40.000 8.29 1.11 38.88 2.57
5906 17721 6.558009 TGTCCGTAATCATTACAGTAGACAC 58.442 40.000 8.29 0.00 35.89 3.67
5911 17726 7.009265 CCGTAATCATTACAGTAGACACAGTTG 59.991 40.741 8.29 0.00 35.89 3.16
5922 17737 3.462021 AGACACAGTTGTTCTTGAGAGC 58.538 45.455 0.00 0.00 35.47 4.09
5971 17786 5.006746 ACACGTTTACTGCTTTCTTTCTCTG 59.993 40.000 0.00 0.00 0.00 3.35
6000 17815 3.118038 GTGAGTGGGTGCCCTCATAAATA 60.118 47.826 8.91 0.00 39.70 1.40
6003 17818 2.558359 GTGGGTGCCCTCATAAATATGC 59.442 50.000 8.91 0.00 36.94 3.14
6006 17821 2.226437 GGTGCCCTCATAAATATGCGTG 59.774 50.000 0.00 0.00 33.76 5.34
6028 17843 9.737025 GCGTGTTCTATTTATTCGGTTTATATC 57.263 33.333 0.00 0.00 0.00 1.63
6093 17912 9.883142 ATTAAAATATGGTTTGGTGTTGGTATG 57.117 29.630 0.00 0.00 0.00 2.39
6140 17968 5.919755 TCGGTATATACCAAAGTTGATGCA 58.080 37.500 27.58 0.00 46.80 3.96
6153 17981 9.947669 CCAAAGTTGATGCAAATTTAAAAATGA 57.052 25.926 5.44 0.00 39.13 2.57
6225 18172 8.652290 ACTAATTACTAAGCTTCCTAGGAATGG 58.348 37.037 24.48 14.83 33.28 3.16
6258 18205 3.054065 AGGATCTAGGCTTTGAAGGGTTG 60.054 47.826 0.00 0.00 0.00 3.77
6261 18208 3.486383 TCTAGGCTTTGAAGGGTTGTTG 58.514 45.455 0.00 0.00 0.00 3.33
6262 18209 1.413118 AGGCTTTGAAGGGTTGTTGG 58.587 50.000 0.00 0.00 0.00 3.77
6266 18213 0.827368 TTTGAAGGGTTGTTGGTGGC 59.173 50.000 0.00 0.00 0.00 5.01
6307 18254 1.135094 ACTGCCTGAGTGGATATGGG 58.865 55.000 0.00 0.00 38.35 4.00
6311 18258 2.090775 TGCCTGAGTGGATATGGGTCTA 60.091 50.000 0.00 0.00 38.35 2.59
6324 18271 9.284131 TGGATATGGGTCTATTAGCAGATAATT 57.716 33.333 0.00 0.00 35.63 1.40
6325 18272 9.553064 GGATATGGGTCTATTAGCAGATAATTG 57.447 37.037 0.00 0.00 35.63 2.32
6345 18292 1.520787 GGCGTCTGTATGGGGTTCG 60.521 63.158 0.00 0.00 0.00 3.95
6382 18329 1.081906 GCACCAACACTGCGACATG 60.082 57.895 0.00 0.00 0.00 3.21
6386 18333 2.483877 CACCAACACTGCGACATGTAAT 59.516 45.455 0.00 0.00 0.00 1.89
6408 18355 9.195411 GTAATGACATCACAACAACAAATGAAT 57.805 29.630 0.00 0.00 0.00 2.57
6410 18357 8.975410 ATGACATCACAACAACAAATGAATAG 57.025 30.769 0.00 0.00 0.00 1.73
6423 18370 4.927267 AATGAATAGGTCACTCCACCAA 57.073 40.909 0.00 0.00 39.72 3.67
6436 18383 6.377146 GTCACTCCACCAAAAACACCATATAT 59.623 38.462 0.00 0.00 0.00 0.86
6453 18404 6.096705 ACCATATATTGTCCACAAACACCATG 59.903 38.462 0.00 0.00 39.55 3.66
6463 18414 4.169508 CACAAACACCATGTCGACAAAAA 58.830 39.130 24.13 0.00 0.00 1.94
6490 18441 9.248291 GAAACAACACAATCATAATCAACAAGT 57.752 29.630 0.00 0.00 0.00 3.16
6508 18459 8.081633 TCAACAAGTCAACCATAATTGAATGAC 58.918 33.333 8.64 0.00 40.22 3.06
6509 18460 7.523293 ACAAGTCAACCATAATTGAATGACA 57.477 32.000 6.50 0.00 40.22 3.58
6510 18461 7.950512 ACAAGTCAACCATAATTGAATGACAA 58.049 30.769 6.50 0.00 40.22 3.18
6511 18462 7.867403 ACAAGTCAACCATAATTGAATGACAAC 59.133 33.333 6.50 0.00 40.22 3.32
6512 18463 6.924111 AGTCAACCATAATTGAATGACAACC 58.076 36.000 6.50 0.00 40.22 3.77
6513 18464 6.071391 AGTCAACCATAATTGAATGACAACCC 60.071 38.462 6.50 0.00 40.22 4.11
6514 18465 5.777223 TCAACCATAATTGAATGACAACCCA 59.223 36.000 0.00 0.00 41.52 4.51
6515 18466 6.268617 TCAACCATAATTGAATGACAACCCAA 59.731 34.615 0.00 0.00 41.52 4.12
6516 18467 6.036577 ACCATAATTGAATGACAACCCAAC 57.963 37.500 0.00 0.00 41.52 3.77
6517 18468 5.541868 ACCATAATTGAATGACAACCCAACA 59.458 36.000 0.00 0.00 41.52 3.33
6518 18469 6.101332 CCATAATTGAATGACAACCCAACAG 58.899 40.000 0.00 0.00 41.52 3.16
6519 18470 4.605640 AATTGAATGACAACCCAACAGG 57.394 40.909 0.00 0.00 41.52 4.00
6520 18471 1.327303 TGAATGACAACCCAACAGGC 58.673 50.000 0.00 0.00 40.58 4.85
6521 18472 0.603065 GAATGACAACCCAACAGGCC 59.397 55.000 0.00 0.00 40.58 5.19
6522 18473 0.105760 AATGACAACCCAACAGGCCA 60.106 50.000 5.01 0.00 40.58 5.36
6523 18474 0.540365 ATGACAACCCAACAGGCCAG 60.540 55.000 5.01 0.00 40.58 4.85
6524 18475 1.903404 GACAACCCAACAGGCCAGG 60.903 63.158 5.01 0.00 40.58 4.45
6525 18476 2.198426 CAACCCAACAGGCCAGGT 59.802 61.111 5.01 0.00 40.58 4.00
6526 18477 2.198426 AACCCAACAGGCCAGGTG 59.802 61.111 6.13 6.13 40.58 4.00
6527 18478 2.391130 AACCCAACAGGCCAGGTGA 61.391 57.895 15.97 0.00 40.58 4.02
6528 18479 1.943730 AACCCAACAGGCCAGGTGAA 61.944 55.000 15.97 0.00 40.58 3.18
6529 18480 1.152567 CCCAACAGGCCAGGTGAAA 60.153 57.895 15.97 0.00 0.00 2.69
6530 18481 1.463553 CCCAACAGGCCAGGTGAAAC 61.464 60.000 15.97 0.00 0.00 2.78
6531 18482 1.654220 CAACAGGCCAGGTGAAACG 59.346 57.895 7.57 0.00 38.12 3.60
6532 18483 2.193536 AACAGGCCAGGTGAAACGC 61.194 57.895 5.01 0.00 38.12 4.84
6533 18484 2.594303 CAGGCCAGGTGAAACGCA 60.594 61.111 5.01 0.00 38.12 5.24
6534 18485 2.594592 AGGCCAGGTGAAACGCAC 60.595 61.111 5.01 0.00 46.98 5.34
6541 18492 3.907893 GTGAAACGCACAGCAAGC 58.092 55.556 0.00 0.00 46.91 4.01
6542 18493 1.658409 GTGAAACGCACAGCAAGCC 60.658 57.895 0.00 0.00 46.91 4.35
6543 18494 2.117779 TGAAACGCACAGCAAGCCA 61.118 52.632 0.00 0.00 0.00 4.75
6544 18495 1.370900 GAAACGCACAGCAAGCCAG 60.371 57.895 0.00 0.00 0.00 4.85
6545 18496 3.489277 AAACGCACAGCAAGCCAGC 62.489 57.895 0.00 0.00 0.00 4.85
6547 18498 4.400109 CGCACAGCAAGCCAGCAG 62.400 66.667 0.55 0.00 36.85 4.24
6548 18499 3.292936 GCACAGCAAGCCAGCAGT 61.293 61.111 0.55 0.00 36.85 4.40
6549 18500 1.968017 GCACAGCAAGCCAGCAGTA 60.968 57.895 0.55 0.00 32.66 2.74
6550 18501 1.518056 GCACAGCAAGCCAGCAGTAA 61.518 55.000 0.55 0.00 32.66 2.24
6551 18502 1.171308 CACAGCAAGCCAGCAGTAAT 58.829 50.000 0.55 0.00 32.66 1.89
6552 18503 2.358957 CACAGCAAGCCAGCAGTAATA 58.641 47.619 0.55 0.00 32.66 0.98
6553 18504 2.353889 CACAGCAAGCCAGCAGTAATAG 59.646 50.000 0.55 0.00 32.66 1.73
6554 18505 2.237143 ACAGCAAGCCAGCAGTAATAGA 59.763 45.455 0.55 0.00 32.12 1.98
6555 18506 3.118112 ACAGCAAGCCAGCAGTAATAGAT 60.118 43.478 0.55 0.00 32.12 1.98
6556 18507 3.881688 CAGCAAGCCAGCAGTAATAGATT 59.118 43.478 0.55 0.00 36.85 2.40
6557 18508 3.881688 AGCAAGCCAGCAGTAATAGATTG 59.118 43.478 0.55 0.00 36.85 2.67
6558 18509 3.629398 GCAAGCCAGCAGTAATAGATTGT 59.371 43.478 0.00 0.00 0.00 2.71
6559 18510 4.497006 GCAAGCCAGCAGTAATAGATTGTG 60.497 45.833 0.00 0.00 0.00 3.33
6560 18511 3.813443 AGCCAGCAGTAATAGATTGTGG 58.187 45.455 0.00 0.00 0.00 4.17
6561 18512 3.200825 AGCCAGCAGTAATAGATTGTGGT 59.799 43.478 0.00 0.00 0.00 4.16
6562 18513 4.408921 AGCCAGCAGTAATAGATTGTGGTA 59.591 41.667 0.00 0.00 0.00 3.25
6563 18514 4.511826 GCCAGCAGTAATAGATTGTGGTAC 59.488 45.833 0.00 0.00 0.00 3.34
6564 18515 5.670485 CCAGCAGTAATAGATTGTGGTACA 58.330 41.667 0.00 0.00 0.00 2.90
6565 18516 6.112734 CCAGCAGTAATAGATTGTGGTACAA 58.887 40.000 0.00 0.00 44.16 2.41
6566 18517 6.597672 CCAGCAGTAATAGATTGTGGTACAAA 59.402 38.462 0.00 0.00 44.16 2.83
6567 18518 7.120579 CCAGCAGTAATAGATTGTGGTACAAAA 59.879 37.037 0.00 0.00 44.16 2.44
6584 18535 8.919145 TGGTACAAAATAAAAAGAGGAACATGT 58.081 29.630 0.00 0.00 31.92 3.21
6598 18549 6.271857 AGAGGAACATGTATAGATTCATGCCT 59.728 38.462 0.00 7.99 43.34 4.75
6599 18550 6.845908 AGGAACATGTATAGATTCATGCCTT 58.154 36.000 0.00 0.00 43.34 4.35
6600 18551 6.713903 AGGAACATGTATAGATTCATGCCTTG 59.286 38.462 0.00 0.00 43.34 3.61
6602 18553 5.945310 ACATGTATAGATTCATGCCTTGGT 58.055 37.500 0.00 0.00 43.34 3.67
6603 18554 6.367983 ACATGTATAGATTCATGCCTTGGTT 58.632 36.000 0.00 0.00 43.34 3.67
6604 18555 6.263842 ACATGTATAGATTCATGCCTTGGTTG 59.736 38.462 0.00 0.00 43.34 3.77
6605 18556 4.580167 TGTATAGATTCATGCCTTGGTTGC 59.420 41.667 0.00 0.00 0.00 4.17
6606 18557 2.226962 AGATTCATGCCTTGGTTGCT 57.773 45.000 0.00 0.00 0.00 3.91
6608 18559 3.285484 AGATTCATGCCTTGGTTGCTAG 58.715 45.455 0.00 0.00 0.00 3.42
6609 18560 2.584835 TTCATGCCTTGGTTGCTAGT 57.415 45.000 0.00 0.00 0.00 2.57
6610 18561 3.712016 TTCATGCCTTGGTTGCTAGTA 57.288 42.857 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.936547 GTCCTTGATCATCTTGGTCGC 59.063 52.381 0.00 0.00 27.66 5.19
6 7 3.251479 TGTCCTTGATCATCTTGGTCG 57.749 47.619 0.00 0.00 27.66 4.79
7 8 3.881688 CCATGTCCTTGATCATCTTGGTC 59.118 47.826 0.00 0.00 0.00 4.02
8 9 3.267812 ACCATGTCCTTGATCATCTTGGT 59.732 43.478 15.55 15.55 33.70 3.67
9 10 3.881688 GACCATGTCCTTGATCATCTTGG 59.118 47.826 0.00 8.30 0.00 3.61
23 24 0.169009 GCAAAAGCGAGGACCATGTC 59.831 55.000 0.00 0.00 0.00 3.06
24 25 0.537143 TGCAAAAGCGAGGACCATGT 60.537 50.000 0.00 0.00 0.00 3.21
26 27 0.883833 CTTGCAAAAGCGAGGACCAT 59.116 50.000 0.00 0.00 0.00 3.55
27 28 0.465460 ACTTGCAAAAGCGAGGACCA 60.465 50.000 0.00 0.00 0.00 4.02
28 29 0.238553 GACTTGCAAAAGCGAGGACC 59.761 55.000 0.00 0.00 0.00 4.46
29 30 0.238553 GGACTTGCAAAAGCGAGGAC 59.761 55.000 0.00 3.42 0.00 3.85
31 32 0.954452 AAGGACTTGCAAAAGCGAGG 59.046 50.000 0.00 0.00 0.00 4.63
32 33 1.876156 AGAAGGACTTGCAAAAGCGAG 59.124 47.619 0.00 3.26 0.00 5.03
33 34 1.603802 CAGAAGGACTTGCAAAAGCGA 59.396 47.619 0.00 0.00 0.00 4.93
35 36 1.775869 GCAGAAGGACTTGCAAAAGC 58.224 50.000 0.00 0.00 0.00 3.51
36 37 1.334869 ACGCAGAAGGACTTGCAAAAG 59.665 47.619 0.00 0.00 0.00 2.27
37 38 1.388547 ACGCAGAAGGACTTGCAAAA 58.611 45.000 0.00 0.00 0.00 2.44
38 39 1.388547 AACGCAGAAGGACTTGCAAA 58.611 45.000 0.00 0.00 0.00 3.68
39 40 1.065401 CAAACGCAGAAGGACTTGCAA 59.935 47.619 0.00 0.00 0.00 4.08
41 42 0.663153 ACAAACGCAGAAGGACTTGC 59.337 50.000 0.00 0.00 0.00 4.01
42 43 1.264288 GGACAAACGCAGAAGGACTTG 59.736 52.381 0.00 0.00 0.00 3.16
43 44 1.141053 AGGACAAACGCAGAAGGACTT 59.859 47.619 0.00 0.00 0.00 3.01
44 45 0.759346 AGGACAAACGCAGAAGGACT 59.241 50.000 0.00 0.00 0.00 3.85
45 46 1.149148 GAGGACAAACGCAGAAGGAC 58.851 55.000 0.00 0.00 0.00 3.85
47 48 1.593196 TTGAGGACAAACGCAGAAGG 58.407 50.000 0.00 0.00 32.73 3.46
48 49 3.363178 GTTTTGAGGACAAACGCAGAAG 58.637 45.455 0.00 0.00 44.22 2.85
49 50 2.098443 GGTTTTGAGGACAAACGCAGAA 59.902 45.455 0.00 0.00 44.22 3.02
50 51 1.673920 GGTTTTGAGGACAAACGCAGA 59.326 47.619 0.00 0.00 44.22 4.26
52 53 1.464734 TGGTTTTGAGGACAAACGCA 58.535 45.000 0.00 0.00 44.22 5.24
54 55 2.034558 AGCATGGTTTTGAGGACAAACG 59.965 45.455 0.00 0.00 44.22 3.60
55 56 3.733443 AGCATGGTTTTGAGGACAAAC 57.267 42.857 0.00 0.00 44.22 2.93
57 58 4.751767 AAAAGCATGGTTTTGAGGACAA 57.248 36.364 29.40 0.00 0.00 3.18
58 59 6.418057 AATAAAAGCATGGTTTTGAGGACA 57.582 33.333 34.51 20.17 31.96 4.02
59 60 6.347644 GCAAATAAAAGCATGGTTTTGAGGAC 60.348 38.462 34.51 21.52 31.96 3.85
61 62 5.389725 CGCAAATAAAAGCATGGTTTTGAGG 60.390 40.000 34.51 24.08 31.96 3.86
62 63 5.610975 CGCAAATAAAAGCATGGTTTTGAG 58.389 37.500 34.51 24.02 31.96 3.02
63 64 4.084118 GCGCAAATAAAAGCATGGTTTTGA 60.084 37.500 34.51 22.54 31.96 2.69
64 65 4.150343 GCGCAAATAAAAGCATGGTTTTG 58.850 39.130 34.51 23.95 31.96 2.44
65 66 3.120718 CGCGCAAATAAAAGCATGGTTTT 60.121 39.130 31.48 31.48 34.07 2.43
66 67 2.411409 CGCGCAAATAAAAGCATGGTTT 59.589 40.909 16.92 16.92 0.00 3.27
67 68 1.991965 CGCGCAAATAAAAGCATGGTT 59.008 42.857 8.75 3.82 0.00 3.67
68 69 1.627879 CGCGCAAATAAAAGCATGGT 58.372 45.000 8.75 0.00 0.00 3.55
72 73 0.386100 TTCGCGCGCAAATAAAAGCA 60.386 45.000 32.61 0.00 0.00 3.91
75 76 2.876992 TAGTTCGCGCGCAAATAAAA 57.123 40.000 32.61 9.66 0.00 1.52
76 77 2.094575 ACATAGTTCGCGCGCAAATAAA 59.905 40.909 32.61 10.52 0.00 1.40
77 78 1.661617 ACATAGTTCGCGCGCAAATAA 59.338 42.857 32.61 16.09 0.00 1.40
78 79 1.282817 ACATAGTTCGCGCGCAAATA 58.717 45.000 32.61 24.86 0.00 1.40
80 81 0.236187 AAACATAGTTCGCGCGCAAA 59.764 45.000 32.61 18.20 0.00 3.68
81 82 0.236187 AAAACATAGTTCGCGCGCAA 59.764 45.000 32.61 20.84 0.00 4.85
82 83 1.069255 TAAAACATAGTTCGCGCGCA 58.931 45.000 32.61 13.12 0.00 6.09
83 84 2.287079 GATAAAACATAGTTCGCGCGC 58.713 47.619 27.95 23.91 0.00 6.86
84 85 2.035176 ACGATAAAACATAGTTCGCGCG 60.035 45.455 26.76 26.76 33.30 6.86
85 86 3.564408 ACGATAAAACATAGTTCGCGC 57.436 42.857 0.00 0.00 33.30 6.86
89 90 9.749490 TCAAATTCGAACGATAAAACATAGTTC 57.251 29.630 0.00 1.54 38.16 3.01
91 92 9.537848 GTTCAAATTCGAACGATAAAACATAGT 57.462 29.630 0.00 0.00 36.26 2.12
104 105 9.445786 TTCTAACAAATGAGTTCAAATTCGAAC 57.554 29.630 0.00 0.75 44.63 3.95
106 107 9.825972 GATTCTAACAAATGAGTTCAAATTCGA 57.174 29.630 0.00 0.00 33.07 3.71
107 108 8.779561 CGATTCTAACAAATGAGTTCAAATTCG 58.220 33.333 0.00 0.00 33.07 3.34
108 109 8.578769 GCGATTCTAACAAATGAGTTCAAATTC 58.421 33.333 0.00 0.00 33.07 2.17
109 110 8.299570 AGCGATTCTAACAAATGAGTTCAAATT 58.700 29.630 0.00 0.00 33.07 1.82
111 112 7.077605 CAGCGATTCTAACAAATGAGTTCAAA 58.922 34.615 0.00 0.00 33.07 2.69
112 113 6.204688 ACAGCGATTCTAACAAATGAGTTCAA 59.795 34.615 0.00 0.00 33.07 2.69
113 114 5.700832 ACAGCGATTCTAACAAATGAGTTCA 59.299 36.000 0.00 0.00 33.07 3.18
115 116 5.700832 TGACAGCGATTCTAACAAATGAGTT 59.299 36.000 0.00 0.00 35.55 3.01
116 117 5.237815 TGACAGCGATTCTAACAAATGAGT 58.762 37.500 0.00 0.00 0.00 3.41
119 120 7.253092 CGAATTTGACAGCGATTCTAACAAATG 60.253 37.037 0.00 0.00 38.47 2.32
120 121 6.742718 CGAATTTGACAGCGATTCTAACAAAT 59.257 34.615 0.00 0.00 39.26 2.32
121 122 6.077197 CGAATTTGACAGCGATTCTAACAAA 58.923 36.000 0.00 0.00 35.33 2.83
122 123 5.617609 CGAATTTGACAGCGATTCTAACAA 58.382 37.500 0.00 0.00 0.00 2.83
124 125 4.022475 GCGAATTTGACAGCGATTCTAAC 58.978 43.478 0.00 0.00 0.00 2.34
125 126 3.932710 AGCGAATTTGACAGCGATTCTAA 59.067 39.130 0.00 0.00 34.34 2.10
126 127 3.521560 AGCGAATTTGACAGCGATTCTA 58.478 40.909 0.00 0.00 34.34 2.10
127 128 2.350522 AGCGAATTTGACAGCGATTCT 58.649 42.857 0.00 0.00 34.34 2.40
128 129 2.813779 AGCGAATTTGACAGCGATTC 57.186 45.000 0.00 0.00 34.34 2.52
129 130 4.882671 ATTAGCGAATTTGACAGCGATT 57.117 36.364 0.00 0.00 34.34 3.34
130 131 4.496341 CCAATTAGCGAATTTGACAGCGAT 60.496 41.667 1.62 0.00 32.73 4.58
131 132 3.181511 CCAATTAGCGAATTTGACAGCGA 60.182 43.478 1.62 0.00 32.73 4.93
133 134 3.128589 TCCCAATTAGCGAATTTGACAGC 59.871 43.478 1.62 0.00 32.73 4.40
134 135 4.963276 TCCCAATTAGCGAATTTGACAG 57.037 40.909 1.62 0.00 32.73 3.51
135 136 5.913137 AATCCCAATTAGCGAATTTGACA 57.087 34.783 1.62 0.00 32.73 3.58
138 139 6.371271 ACCAAAAATCCCAATTAGCGAATTTG 59.629 34.615 1.62 0.00 32.73 2.32
140 141 6.048732 ACCAAAAATCCCAATTAGCGAATT 57.951 33.333 0.00 0.00 35.56 2.17
141 142 5.675684 ACCAAAAATCCCAATTAGCGAAT 57.324 34.783 0.00 0.00 0.00 3.34
142 143 5.476091 AACCAAAAATCCCAATTAGCGAA 57.524 34.783 0.00 0.00 0.00 4.70
143 144 5.233988 CAAACCAAAAATCCCAATTAGCGA 58.766 37.500 0.00 0.00 0.00 4.93
144 145 4.142924 GCAAACCAAAAATCCCAATTAGCG 60.143 41.667 0.00 0.00 0.00 4.26
145 146 4.142924 CGCAAACCAAAAATCCCAATTAGC 60.143 41.667 0.00 0.00 0.00 3.09
146 147 4.391523 CCGCAAACCAAAAATCCCAATTAG 59.608 41.667 0.00 0.00 0.00 1.73
147 148 4.319177 CCGCAAACCAAAAATCCCAATTA 58.681 39.130 0.00 0.00 0.00 1.40
149 150 2.551938 CCCGCAAACCAAAAATCCCAAT 60.552 45.455 0.00 0.00 0.00 3.16
150 151 1.202698 CCCGCAAACCAAAAATCCCAA 60.203 47.619 0.00 0.00 0.00 4.12
151 152 0.394565 CCCGCAAACCAAAAATCCCA 59.605 50.000 0.00 0.00 0.00 4.37
152 153 0.394938 ACCCGCAAACCAAAAATCCC 59.605 50.000 0.00 0.00 0.00 3.85
153 154 1.790755 GACCCGCAAACCAAAAATCC 58.209 50.000 0.00 0.00 0.00 3.01
154 155 1.001158 TCGACCCGCAAACCAAAAATC 60.001 47.619 0.00 0.00 0.00 2.17
155 156 1.033574 TCGACCCGCAAACCAAAAAT 58.966 45.000 0.00 0.00 0.00 1.82
157 158 0.312416 CATCGACCCGCAAACCAAAA 59.688 50.000 0.00 0.00 0.00 2.44
158 159 1.953017 CATCGACCCGCAAACCAAA 59.047 52.632 0.00 0.00 0.00 3.28
160 161 3.053291 GCATCGACCCGCAAACCA 61.053 61.111 0.00 0.00 0.00 3.67
161 162 2.746277 AGCATCGACCCGCAAACC 60.746 61.111 6.14 0.00 0.00 3.27
162 163 2.480555 CAGCATCGACCCGCAAAC 59.519 61.111 6.14 0.00 0.00 2.93
168 169 4.899239 CTCGGGCAGCATCGACCC 62.899 72.222 6.05 0.00 40.51 4.46
181 182 4.697756 TTTGCGGGGTCTGCTCGG 62.698 66.667 0.30 0.00 0.00 4.63
182 183 3.121030 CTTTGCGGGGTCTGCTCG 61.121 66.667 0.30 0.00 0.00 5.03
183 184 3.435186 GCTTTGCGGGGTCTGCTC 61.435 66.667 0.30 0.00 0.00 4.26
186 187 4.697756 TCGGCTTTGCGGGGTCTG 62.698 66.667 0.00 0.00 0.00 3.51
187 188 4.699522 GTCGGCTTTGCGGGGTCT 62.700 66.667 0.00 0.00 0.00 3.85
192 193 4.745751 TACGGGTCGGCTTTGCGG 62.746 66.667 0.00 0.00 0.00 5.69
193 194 1.843734 TTTTACGGGTCGGCTTTGCG 61.844 55.000 0.00 0.00 0.00 4.85
194 195 0.311477 TTTTTACGGGTCGGCTTTGC 59.689 50.000 0.00 0.00 0.00 3.68
195 196 1.068816 CCTTTTTACGGGTCGGCTTTG 60.069 52.381 0.00 0.00 0.00 2.77
197 198 1.239296 GCCTTTTTACGGGTCGGCTT 61.239 55.000 0.00 0.00 34.80 4.35
199 200 1.310216 ATGCCTTTTTACGGGTCGGC 61.310 55.000 0.00 0.00 38.01 5.54
200 201 0.730840 GATGCCTTTTTACGGGTCGG 59.269 55.000 0.00 0.00 0.00 4.79
202 203 3.344515 AGAAGATGCCTTTTTACGGGTC 58.655 45.455 0.00 0.00 31.62 4.46
203 204 3.434940 AGAAGATGCCTTTTTACGGGT 57.565 42.857 0.00 0.00 31.62 5.28
204 205 3.128764 GGAAGAAGATGCCTTTTTACGGG 59.871 47.826 0.00 0.00 31.62 5.28
205 206 3.756434 TGGAAGAAGATGCCTTTTTACGG 59.244 43.478 0.00 0.00 31.76 4.02
206 207 5.371115 TTGGAAGAAGATGCCTTTTTACG 57.629 39.130 0.00 0.00 31.76 3.18
207 208 8.138074 GGATATTGGAAGAAGATGCCTTTTTAC 58.862 37.037 0.00 0.00 31.62 2.01
208 209 8.061304 AGGATATTGGAAGAAGATGCCTTTTTA 58.939 33.333 0.00 0.00 31.62 1.52
209 210 6.899631 AGGATATTGGAAGAAGATGCCTTTTT 59.100 34.615 0.00 0.00 31.62 1.94
211 212 6.023334 AGGATATTGGAAGAAGATGCCTTT 57.977 37.500 0.00 0.00 31.62 3.11
213 214 5.659849 AAGGATATTGGAAGAAGATGCCT 57.340 39.130 0.00 0.00 0.00 4.75
214 215 6.721704 AAAAGGATATTGGAAGAAGATGCC 57.278 37.500 0.00 0.00 0.00 4.40
218 219 8.154856 CCCGTATAAAAGGATATTGGAAGAAGA 58.845 37.037 0.00 0.00 0.00 2.87
223 224 6.536447 GGACCCGTATAAAAGGATATTGGAA 58.464 40.000 0.00 0.00 0.00 3.53
224 225 5.279607 CGGACCCGTATAAAAGGATATTGGA 60.280 44.000 0.00 0.00 34.35 3.53
225 226 4.933400 CGGACCCGTATAAAAGGATATTGG 59.067 45.833 0.00 0.00 34.35 3.16
247 248 2.027625 GAGTCAGACCCCGCAAACG 61.028 63.158 0.00 0.00 39.67 3.60
248 249 0.951040 CAGAGTCAGACCCCGCAAAC 60.951 60.000 0.00 0.00 0.00 2.93
249 250 1.371183 CAGAGTCAGACCCCGCAAA 59.629 57.895 0.00 0.00 0.00 3.68
250 251 3.059982 CAGAGTCAGACCCCGCAA 58.940 61.111 0.00 0.00 0.00 4.85
251 252 3.695606 GCAGAGTCAGACCCCGCA 61.696 66.667 0.00 0.00 0.00 5.69
253 254 4.135153 CCGCAGAGTCAGACCCCG 62.135 72.222 0.00 0.00 0.00 5.73
254 255 4.459089 GCCGCAGAGTCAGACCCC 62.459 72.222 0.00 0.00 0.00 4.95
256 257 4.803426 CGGCCGCAGAGTCAGACC 62.803 72.222 14.67 0.00 0.00 3.85
282 283 2.660224 CAAACGGTTTTGCGGGCC 60.660 61.111 2.79 0.00 35.94 5.80
283 284 1.947146 GACAAACGGTTTTGCGGGC 60.947 57.895 2.79 0.00 45.32 6.13
284 285 1.299544 GGACAAACGGTTTTGCGGG 60.300 57.895 2.79 0.00 45.32 6.13
286 287 1.062845 ACGGACAAACGGTTTTGCG 59.937 52.632 11.84 11.84 45.32 4.85
287 288 0.099082 TCACGGACAAACGGTTTTGC 59.901 50.000 2.79 0.00 45.32 3.68
291 292 1.011333 CAGTTCACGGACAAACGGTT 58.989 50.000 0.00 0.00 38.39 4.44
292 293 0.812412 CCAGTTCACGGACAAACGGT 60.812 55.000 0.00 0.00 38.39 4.83
293 294 0.531090 TCCAGTTCACGGACAAACGG 60.531 55.000 0.00 0.00 38.39 4.44
294 295 1.292061 TTCCAGTTCACGGACAAACG 58.708 50.000 0.00 0.00 40.31 3.60
295 296 2.538132 CGTTTCCAGTTCACGGACAAAC 60.538 50.000 0.00 0.00 30.29 2.93
296 297 1.666700 CGTTTCCAGTTCACGGACAAA 59.333 47.619 0.00 0.00 30.29 2.83
297 298 1.292061 CGTTTCCAGTTCACGGACAA 58.708 50.000 0.00 0.00 30.29 3.18
298 299 1.155424 GCGTTTCCAGTTCACGGACA 61.155 55.000 0.00 0.00 34.42 4.02
300 301 1.952133 CGCGTTTCCAGTTCACGGA 60.952 57.895 0.00 0.00 34.42 4.69
301 302 1.768112 AACGCGTTTCCAGTTCACGG 61.768 55.000 20.79 0.00 34.42 4.94
302 303 0.027063 AAACGCGTTTCCAGTTCACG 59.973 50.000 30.36 0.00 36.98 4.35
303 304 1.843753 CAAAACGCGTTTCCAGTTCAC 59.156 47.619 34.77 0.00 31.45 3.18
305 306 1.843753 CACAAAACGCGTTTCCAGTTC 59.156 47.619 34.77 0.00 31.45 3.01
308 309 0.593773 CCCACAAAACGCGTTTCCAG 60.594 55.000 34.77 27.48 31.45 3.86
309 310 1.313812 ACCCACAAAACGCGTTTCCA 61.314 50.000 34.77 0.00 31.45 3.53
310 311 0.593008 GACCCACAAAACGCGTTTCC 60.593 55.000 34.77 15.21 31.45 3.13
311 312 0.099082 TGACCCACAAAACGCGTTTC 59.901 50.000 34.77 21.79 31.45 2.78
312 313 0.179158 GTGACCCACAAAACGCGTTT 60.179 50.000 30.36 30.36 34.08 3.60
315 316 2.330041 GGTGACCCACAAAACGCG 59.670 61.111 3.53 3.53 35.86 6.01
316 317 1.995646 AACGGTGACCCACAAAACGC 61.996 55.000 0.00 0.00 35.86 4.84
318 319 3.120580 CGTATAACGGTGACCCACAAAAC 60.121 47.826 0.00 0.00 38.08 2.43
321 322 2.367030 CGTATAACGGTGACCCACAA 57.633 50.000 0.00 0.00 38.08 3.33
332 333 2.224606 TCTAGCAGACCCCGTATAACG 58.775 52.381 0.00 0.00 42.11 3.18
333 334 3.484407 TCTCTAGCAGACCCCGTATAAC 58.516 50.000 0.00 0.00 0.00 1.89
335 336 4.535294 AGTATCTCTAGCAGACCCCGTATA 59.465 45.833 0.00 0.00 32.26 1.47
336 337 2.982339 ATCTCTAGCAGACCCCGTAT 57.018 50.000 0.00 0.00 32.26 3.06
337 338 2.709934 AGTATCTCTAGCAGACCCCGTA 59.290 50.000 0.00 0.00 32.26 4.02
338 339 1.495574 AGTATCTCTAGCAGACCCCGT 59.504 52.381 0.00 0.00 32.26 5.28
353 354 2.981140 GCCTCGCGACAATAAGAGTATC 59.019 50.000 3.71 0.00 0.00 2.24
354 355 2.361119 TGCCTCGCGACAATAAGAGTAT 59.639 45.455 3.71 0.00 0.00 2.12
356 357 0.530744 TGCCTCGCGACAATAAGAGT 59.469 50.000 3.71 0.00 0.00 3.24
359 360 2.413112 CCATATGCCTCGCGACAATAAG 59.587 50.000 3.71 0.58 0.00 1.73
404 407 4.145365 TGAATAACATCGACCCGGAAAT 57.855 40.909 0.73 0.00 0.00 2.17
443 446 7.042456 GGACGATGCATGTAGCCATATATTAAG 60.042 40.741 2.46 0.00 44.83 1.85
446 449 5.104776 AGGACGATGCATGTAGCCATATATT 60.105 40.000 2.46 0.00 44.83 1.28
447 450 4.406972 AGGACGATGCATGTAGCCATATAT 59.593 41.667 2.46 0.00 44.83 0.86
449 452 2.568956 AGGACGATGCATGTAGCCATAT 59.431 45.455 2.46 0.00 44.83 1.78
475 478 4.424842 AGAAGGATAATCCCTAGCCTCTG 58.575 47.826 0.00 0.00 46.13 3.35
508 511 8.512966 AAAGCTCAAGTTTTTCTAGACTCTTT 57.487 30.769 0.00 0.00 0.00 2.52
606 609 1.067635 GCTTTCGGACATGGTGCAAAT 60.068 47.619 0.00 0.00 0.00 2.32
607 610 0.313672 GCTTTCGGACATGGTGCAAA 59.686 50.000 0.00 0.00 0.00 3.68
608 611 0.537143 AGCTTTCGGACATGGTGCAA 60.537 50.000 0.00 0.00 0.00 4.08
609 612 0.537143 AAGCTTTCGGACATGGTGCA 60.537 50.000 0.00 0.00 0.00 4.57
610 613 0.109597 CAAGCTTTCGGACATGGTGC 60.110 55.000 0.00 0.00 0.00 5.01
618 621 5.384063 TTGATAATTTGCAAGCTTTCGGA 57.616 34.783 0.00 0.00 0.00 4.55
733 737 5.144100 ACCATTCCCAAGTCAACACATTAA 58.856 37.500 0.00 0.00 0.00 1.40
782 786 4.580167 TCAAACCTTCAGTGATTGGAGTTG 59.420 41.667 16.64 17.09 29.49 3.16
808 812 2.159226 CCTTCACGTAGATCAGTGACCC 60.159 54.545 15.21 0.00 45.71 4.46
874 878 3.645884 TGGTCTTACAAGCGTTAGTGTC 58.354 45.455 0.00 0.00 0.00 3.67
877 881 4.267349 ACATGGTCTTACAAGCGTTAGT 57.733 40.909 0.00 0.00 0.00 2.24
879 883 5.395682 AGTACATGGTCTTACAAGCGTTA 57.604 39.130 0.00 0.00 0.00 3.18
882 886 3.181520 GCAAGTACATGGTCTTACAAGCG 60.182 47.826 0.00 0.00 0.00 4.68
883 887 3.751175 TGCAAGTACATGGTCTTACAAGC 59.249 43.478 0.00 2.10 0.00 4.01
886 890 7.880713 TCTTAAATGCAAGTACATGGTCTTACA 59.119 33.333 0.00 2.78 0.00 2.41
887 891 8.263940 TCTTAAATGCAAGTACATGGTCTTAC 57.736 34.615 0.00 0.00 0.00 2.34
891 895 5.123820 TGCTCTTAAATGCAAGTACATGGTC 59.876 40.000 0.00 0.00 36.15 4.02
984 1875 2.169789 CATGAGCTGCGAGTTCCGG 61.170 63.158 0.00 0.00 39.04 5.14
1122 2013 1.224592 GAAGGCACCACCATCGGAT 59.775 57.895 0.00 0.00 43.14 4.18
1247 2152 2.740447 GTGTTAGTCGGTGATGGGTTTC 59.260 50.000 0.00 0.00 0.00 2.78
1254 2159 3.432378 AGAGAAGGTGTTAGTCGGTGAT 58.568 45.455 0.00 0.00 0.00 3.06
1255 2160 2.818432 GAGAGAAGGTGTTAGTCGGTGA 59.182 50.000 0.00 0.00 0.00 4.02
1257 2162 2.169330 GGAGAGAAGGTGTTAGTCGGT 58.831 52.381 0.00 0.00 0.00 4.69
1260 2165 2.094649 CGGTGGAGAGAAGGTGTTAGTC 60.095 54.545 0.00 0.00 0.00 2.59
1262 2167 2.094649 GTCGGTGGAGAGAAGGTGTTAG 60.095 54.545 0.00 0.00 0.00 2.34
1569 2483 3.467226 TAAGAGAAGCGCCCCGGG 61.467 66.667 15.80 15.80 0.00 5.73
1867 2784 1.276622 GGCCACCTTGAGAGGACTAA 58.723 55.000 0.00 0.00 46.74 2.24
1982 2914 0.680061 GTCCCACTCCTTCGTGTTCT 59.320 55.000 0.00 0.00 33.07 3.01
2049 2981 0.040425 CCAAAAAGCCGTCGTCCTTG 60.040 55.000 0.00 0.00 0.00 3.61
2051 2983 2.258726 GCCAAAAAGCCGTCGTCCT 61.259 57.895 0.00 0.00 0.00 3.85
2202 3134 2.911509 TTTCCACCGGACCGTCGA 60.912 61.111 9.46 1.75 0.00 4.20
2390 3366 7.164122 TGCTATAAGAATAGAGAAATGGCCAG 58.836 38.462 13.05 0.00 37.84 4.85
2414 3510 6.466812 TCACCTATGGAATACATGCATACTG 58.533 40.000 0.00 0.00 40.91 2.74
2443 3585 2.026641 CATCACTACAATGCCCCTTGG 58.973 52.381 0.00 0.00 0.00 3.61
2449 3591 6.866010 TGATACAATCATCACTACAATGCC 57.134 37.500 0.00 0.00 33.59 4.40
2471 3613 2.556622 ACGCCAGTTCCTAAAATTGGTG 59.443 45.455 10.25 10.25 0.00 4.17
2490 3632 0.311790 AAATGCAGAGTGCCACAACG 59.688 50.000 0.00 0.00 44.23 4.10
2511 3656 5.248248 ACCTTTAAATTTTAGCCATGCCAGT 59.752 36.000 0.00 0.00 0.00 4.00
2592 3764 7.912250 CGTTACGGTAAATGAAGTAGTAGATGT 59.088 37.037 1.47 0.00 0.00 3.06
2594 3766 7.989826 ACGTTACGGTAAATGAAGTAGTAGAT 58.010 34.615 10.20 0.00 0.00 1.98
2605 3777 7.754069 TTATAGTCCAACGTTACGGTAAATG 57.246 36.000 10.20 1.30 0.00 2.32
2607 3779 8.770438 ATTTTATAGTCCAACGTTACGGTAAA 57.230 30.769 10.20 5.43 0.00 2.01
2608 3780 8.250332 AGATTTTATAGTCCAACGTTACGGTAA 58.750 33.333 10.20 0.00 0.00 2.85
2612 3784 9.294030 ACTAAGATTTTATAGTCCAACGTTACG 57.706 33.333 0.00 2.19 0.00 3.18
2637 3809 3.982058 CCTCTCATATTCGGCGAGTTTAC 59.018 47.826 10.94 0.00 0.00 2.01
2638 3810 3.552273 GCCTCTCATATTCGGCGAGTTTA 60.552 47.826 10.94 4.51 32.22 2.01
2645 3958 0.667792 GTCCGCCTCTCATATTCGGC 60.668 60.000 0.00 0.00 39.90 5.54
2682 4463 7.563924 ACGGCCTAACATATATATAGATGGTGT 59.436 37.037 16.48 4.26 0.00 4.16
2683 4464 7.952671 ACGGCCTAACATATATATAGATGGTG 58.047 38.462 16.48 7.68 0.00 4.17
2686 4467 8.082852 GGTGACGGCCTAACATATATATAGATG 58.917 40.741 14.43 14.43 0.00 2.90
2687 4468 7.783119 TGGTGACGGCCTAACATATATATAGAT 59.217 37.037 0.00 0.00 0.00 1.98
2689 4470 7.342769 TGGTGACGGCCTAACATATATATAG 57.657 40.000 0.00 0.00 0.00 1.31
2748 5704 9.535170 TGATGGTTTTGGGTAAATAACTCATTA 57.465 29.630 0.00 0.00 38.75 1.90
2750 5706 7.453126 TGTGATGGTTTTGGGTAAATAACTCAT 59.547 33.333 0.00 0.00 38.75 2.90
2777 5739 3.150458 AGTTGTTACCTTAGCCCCAAC 57.850 47.619 0.00 0.00 34.01 3.77
2787 5749 4.717279 ATGTGGTACCAAGTTGTTACCT 57.283 40.909 24.91 7.43 0.00 3.08
2832 5794 2.151881 TACGTTAGGCGCAAAGTTGA 57.848 45.000 10.83 0.00 46.11 3.18
2853 5815 1.142778 GAGAATGAGTGCTCGGCGTC 61.143 60.000 6.85 0.30 0.00 5.19
2856 5818 0.174389 TCAGAGAATGAGTGCTCGGC 59.826 55.000 0.00 0.00 36.29 5.54
2866 5828 4.313277 TCCGTGAGCTTATCAGAGAATG 57.687 45.455 0.00 0.00 39.07 2.67
2892 5854 1.620822 GGCCAACTTGTCAGGTTCAT 58.379 50.000 0.00 0.00 0.00 2.57
2897 5859 1.903404 GTGGGGCCAACTTGTCAGG 60.903 63.158 4.39 0.00 0.00 3.86
2942 5904 4.062293 CCACATCAGTCGGTCAAAGTTTA 58.938 43.478 0.00 0.00 0.00 2.01
3002 5964 5.624159 TGGAATGTTGTGAAGAAGATGACT 58.376 37.500 0.00 0.00 0.00 3.41
3024 5986 2.094026 TCGATGGAATGCCCGATAGATG 60.094 50.000 0.00 0.00 37.93 2.90
3109 6071 4.821589 CTCGCCTCTTCCCCGCAC 62.822 72.222 0.00 0.00 0.00 5.34
3129 6093 4.333649 CACACATACATGCTCAAGGTTAGG 59.666 45.833 0.00 0.00 0.00 2.69
3132 6096 2.489329 GCACACATACATGCTCAAGGTT 59.511 45.455 0.00 0.00 38.84 3.50
3202 6167 2.046988 CACCATGCTCTGTCGGCA 60.047 61.111 0.00 0.00 44.05 5.69
3227 6192 4.678743 GGTCCCCAAGCCGCCTTT 62.679 66.667 0.00 0.00 0.00 3.11
3296 6261 2.933573 ACACCTCGTATCTAGTCCCTG 58.066 52.381 0.00 0.00 0.00 4.45
3308 6273 1.948145 CGGCTAATCTCTACACCTCGT 59.052 52.381 0.00 0.00 0.00 4.18
3314 6279 1.957177 CTGCTCCGGCTAATCTCTACA 59.043 52.381 0.00 0.00 39.59 2.74
3316 6281 1.145119 TCCTGCTCCGGCTAATCTCTA 59.855 52.381 0.00 0.00 39.59 2.43
3324 6289 3.222855 CGATCTCCTGCTCCGGCT 61.223 66.667 0.00 0.00 39.59 5.52
3325 6290 3.206211 CTCGATCTCCTGCTCCGGC 62.206 68.421 0.00 0.00 39.26 6.13
3347 6312 2.764547 TCCGACCACACACCACCA 60.765 61.111 0.00 0.00 0.00 4.17
3388 6353 1.214589 CGGACGTCCAGAATCGGTT 59.785 57.895 32.80 0.00 35.14 4.44
3408 6373 1.207791 CCCTACCAGAGCACTTGGAT 58.792 55.000 7.99 0.00 0.00 3.41
3416 6381 0.107945 CTGAGCAACCCTACCAGAGC 60.108 60.000 0.00 0.00 0.00 4.09
3443 6412 1.342076 ACGACCTTATCTGGGAGCTCA 60.342 52.381 17.19 0.00 0.00 4.26
3495 6464 1.211190 GTAGTCGTCGCCGGTCTTT 59.789 57.895 1.90 0.00 33.95 2.52
3497 6466 3.494336 CGTAGTCGTCGCCGGTCT 61.494 66.667 1.90 0.00 33.95 3.85
3511 6480 2.032620 GAAGCTCCTTCCTGATCCGTA 58.967 52.381 0.00 0.00 34.71 4.02
3522 6502 0.329596 GACACCCATGGAAGCTCCTT 59.670 55.000 15.22 0.00 37.46 3.36
3530 6516 3.326578 CCCCACGACACCCATGGA 61.327 66.667 15.22 0.00 35.33 3.41
3538 6524 2.747022 CATCCACACCCCACGACA 59.253 61.111 0.00 0.00 0.00 4.35
3563 6550 1.139853 CTTGATCTGGTGCCTAGGACC 59.860 57.143 14.75 17.16 0.00 4.46
3564 6551 1.139853 CCTTGATCTGGTGCCTAGGAC 59.860 57.143 14.75 7.89 0.00 3.85
3565 6552 1.500474 CCTTGATCTGGTGCCTAGGA 58.500 55.000 14.75 0.00 0.00 2.94
3566 6553 0.471617 CCCTTGATCTGGTGCCTAGG 59.528 60.000 3.67 3.67 0.00 3.02
3567 6554 1.134280 CACCCTTGATCTGGTGCCTAG 60.134 57.143 14.03 0.00 44.98 3.02
3568 6555 0.911769 CACCCTTGATCTGGTGCCTA 59.088 55.000 14.03 0.00 44.98 3.93
3569 6556 1.687612 CACCCTTGATCTGGTGCCT 59.312 57.895 14.03 0.00 44.98 4.75
3573 6560 2.671070 CGCCACCCTTGATCTGGT 59.329 61.111 0.00 0.00 34.40 4.00
3574 6561 2.124570 CCGCCACCCTTGATCTGG 60.125 66.667 0.00 0.00 0.00 3.86
3576 6563 3.411517 CCCCGCCACCCTTGATCT 61.412 66.667 0.00 0.00 0.00 2.75
3592 6579 4.388499 ATGTGGACGCCCGTGACC 62.388 66.667 0.00 0.00 34.29 4.02
3593 6580 2.813908 GATGTGGACGCCCGTGAC 60.814 66.667 0.00 0.00 34.29 3.67
3594 6581 2.994995 AGATGTGGACGCCCGTGA 60.995 61.111 0.00 0.00 34.29 4.35
3595 6582 2.815211 CAGATGTGGACGCCCGTG 60.815 66.667 0.00 0.00 34.29 4.94
3597 6584 3.770040 TCCAGATGTGGACGCCCG 61.770 66.667 7.67 0.00 46.77 6.13
3604 6591 1.447838 CCGTCCGTTCCAGATGTGG 60.448 63.158 1.45 1.45 46.63 4.17
3605 6592 1.014044 CACCGTCCGTTCCAGATGTG 61.014 60.000 0.00 0.00 0.00 3.21
3606 6593 1.292223 CACCGTCCGTTCCAGATGT 59.708 57.895 0.00 0.00 0.00 3.06
3607 6594 1.447838 CCACCGTCCGTTCCAGATG 60.448 63.158 0.00 0.00 0.00 2.90
3608 6595 1.885163 GACCACCGTCCGTTCCAGAT 61.885 60.000 0.00 0.00 32.40 2.90
3609 6596 2.522436 ACCACCGTCCGTTCCAGA 60.522 61.111 0.00 0.00 0.00 3.86
3610 6597 2.048503 GACCACCGTCCGTTCCAG 60.049 66.667 0.00 0.00 32.40 3.86
3611 6598 3.980989 CGACCACCGTCCGTTCCA 61.981 66.667 0.00 0.00 35.40 3.53
3612 6599 4.729856 CCGACCACCGTCCGTTCC 62.730 72.222 0.00 0.00 35.40 3.62
3621 6608 3.365265 CTTGCCTTGCCGACCACC 61.365 66.667 0.00 0.00 0.00 4.61
3622 6609 2.594592 ACTTGCCTTGCCGACCAC 60.595 61.111 0.00 0.00 0.00 4.16
3623 6610 2.594303 CACTTGCCTTGCCGACCA 60.594 61.111 0.00 0.00 0.00 4.02
3624 6611 3.365265 CCACTTGCCTTGCCGACC 61.365 66.667 0.00 0.00 0.00 4.79
3625 6612 4.043200 GCCACTTGCCTTGCCGAC 62.043 66.667 0.00 0.00 0.00 4.79
3634 6621 4.643387 ACCACTCGGGCCACTTGC 62.643 66.667 4.39 0.00 42.05 4.01
3635 6622 2.669569 CACCACTCGGGCCACTTG 60.670 66.667 4.39 0.00 42.05 3.16
3636 6623 4.643387 GCACCACTCGGGCCACTT 62.643 66.667 4.39 0.00 42.05 3.16
3645 6632 4.767255 CCCCGAGCAGCACCACTC 62.767 72.222 0.00 0.00 0.00 3.51
3684 6671 3.591254 AACTCCTCTCGCCAACGCC 62.591 63.158 0.00 0.00 39.84 5.68
3685 6672 2.048127 AACTCCTCTCGCCAACGC 60.048 61.111 0.00 0.00 39.84 4.84
3686 6673 1.738099 CCAACTCCTCTCGCCAACG 60.738 63.158 0.00 0.00 42.01 4.10
3687 6674 0.250338 AACCAACTCCTCTCGCCAAC 60.250 55.000 0.00 0.00 0.00 3.77
3688 6675 0.250295 CAACCAACTCCTCTCGCCAA 60.250 55.000 0.00 0.00 0.00 4.52
3689 6676 1.118965 TCAACCAACTCCTCTCGCCA 61.119 55.000 0.00 0.00 0.00 5.69
3690 6677 0.250513 ATCAACCAACTCCTCTCGCC 59.749 55.000 0.00 0.00 0.00 5.54
3691 6678 1.363744 CATCAACCAACTCCTCTCGC 58.636 55.000 0.00 0.00 0.00 5.03
3692 6679 1.276421 ACCATCAACCAACTCCTCTCG 59.724 52.381 0.00 0.00 0.00 4.04
3693 6680 2.616510 CCACCATCAACCAACTCCTCTC 60.617 54.545 0.00 0.00 0.00 3.20
3694 6681 1.352352 CCACCATCAACCAACTCCTCT 59.648 52.381 0.00 0.00 0.00 3.69
3695 6682 1.351017 TCCACCATCAACCAACTCCTC 59.649 52.381 0.00 0.00 0.00 3.71
3696 6683 1.352352 CTCCACCATCAACCAACTCCT 59.648 52.381 0.00 0.00 0.00 3.69
3697 6684 1.614317 CCTCCACCATCAACCAACTCC 60.614 57.143 0.00 0.00 0.00 3.85
3698 6685 1.351017 TCCTCCACCATCAACCAACTC 59.649 52.381 0.00 0.00 0.00 3.01
3699 6686 1.444933 TCCTCCACCATCAACCAACT 58.555 50.000 0.00 0.00 0.00 3.16
3700 6687 2.162681 CTTCCTCCACCATCAACCAAC 58.837 52.381 0.00 0.00 0.00 3.77
3701 6688 2.040278 CTCTTCCTCCACCATCAACCAA 59.960 50.000 0.00 0.00 0.00 3.67
3702 6689 1.630369 CTCTTCCTCCACCATCAACCA 59.370 52.381 0.00 0.00 0.00 3.67
3703 6690 1.065126 CCTCTTCCTCCACCATCAACC 60.065 57.143 0.00 0.00 0.00 3.77
3704 6691 1.630878 ACCTCTTCCTCCACCATCAAC 59.369 52.381 0.00 0.00 0.00 3.18
3705 6692 2.044793 ACCTCTTCCTCCACCATCAA 57.955 50.000 0.00 0.00 0.00 2.57
3706 6693 2.752030 CTACCTCTTCCTCCACCATCA 58.248 52.381 0.00 0.00 0.00 3.07
3707 6694 1.414550 GCTACCTCTTCCTCCACCATC 59.585 57.143 0.00 0.00 0.00 3.51
3708 6695 1.008938 AGCTACCTCTTCCTCCACCAT 59.991 52.381 0.00 0.00 0.00 3.55
3709 6696 0.413832 AGCTACCTCTTCCTCCACCA 59.586 55.000 0.00 0.00 0.00 4.17
3710 6697 1.116308 GAGCTACCTCTTCCTCCACC 58.884 60.000 0.00 0.00 35.16 4.61
3711 6698 2.153034 AGAGCTACCTCTTCCTCCAC 57.847 55.000 0.00 0.00 46.16 4.02
3720 6707 1.133407 CGACACCTGAAGAGCTACCTC 59.867 57.143 0.00 0.00 38.42 3.85
3721 6708 1.178276 CGACACCTGAAGAGCTACCT 58.822 55.000 0.00 0.00 0.00 3.08
3722 6709 0.173708 CCGACACCTGAAGAGCTACC 59.826 60.000 0.00 0.00 0.00 3.18
3723 6710 0.173708 CCCGACACCTGAAGAGCTAC 59.826 60.000 0.00 0.00 0.00 3.58
3724 6711 1.605058 GCCCGACACCTGAAGAGCTA 61.605 60.000 0.00 0.00 0.00 3.32
3725 6712 2.948720 GCCCGACACCTGAAGAGCT 61.949 63.158 0.00 0.00 0.00 4.09
3726 6713 2.435059 GCCCGACACCTGAAGAGC 60.435 66.667 0.00 0.00 0.00 4.09
3727 6714 1.079543 CAGCCCGACACCTGAAGAG 60.080 63.158 0.00 0.00 0.00 2.85
3728 6715 3.059982 CAGCCCGACACCTGAAGA 58.940 61.111 0.00 0.00 0.00 2.87
3729 6716 2.743928 GCAGCCCGACACCTGAAG 60.744 66.667 0.00 0.00 0.00 3.02
3730 6717 4.329545 GGCAGCCCGACACCTGAA 62.330 66.667 0.00 0.00 0.00 3.02
3740 6727 4.828296 CATCCCCACTGGCAGCCC 62.828 72.222 15.89 0.00 0.00 5.19
3741 6728 3.731728 TCATCCCCACTGGCAGCC 61.732 66.667 15.89 3.66 0.00 4.85
3742 6729 2.439156 GTCATCCCCACTGGCAGC 60.439 66.667 15.89 0.00 0.00 5.25
3743 6730 2.273449 GGTCATCCCCACTGGCAG 59.727 66.667 14.16 14.16 0.00 4.85
3744 6731 3.716195 CGGTCATCCCCACTGGCA 61.716 66.667 0.00 0.00 0.00 4.92
3745 6732 3.717294 ACGGTCATCCCCACTGGC 61.717 66.667 0.00 0.00 0.00 4.85
3746 6733 2.268920 CACGGTCATCCCCACTGG 59.731 66.667 0.00 0.00 0.00 4.00
3747 6734 2.268920 CCACGGTCATCCCCACTG 59.731 66.667 0.00 0.00 0.00 3.66
3748 6735 2.203938 ACCACGGTCATCCCCACT 60.204 61.111 0.00 0.00 0.00 4.00
3749 6736 2.046314 CACCACGGTCATCCCCAC 60.046 66.667 0.00 0.00 0.00 4.61
3750 6737 3.326578 CCACCACGGTCATCCCCA 61.327 66.667 0.00 0.00 0.00 4.96
3751 6738 4.796495 GCCACCACGGTCATCCCC 62.796 72.222 0.00 0.00 36.97 4.81
3752 6739 4.796495 GGCCACCACGGTCATCCC 62.796 72.222 0.00 0.00 40.18 3.85
3754 6741 4.077184 TCGGCCACCACGGTCATC 62.077 66.667 2.24 0.00 40.64 2.92
3755 6742 4.388499 GTCGGCCACCACGGTCAT 62.388 66.667 2.24 0.00 40.64 3.06
3769 6756 4.838152 CCTCCGCCACCATGGTCG 62.838 72.222 16.53 16.76 40.46 4.79
3772 6759 4.511246 ATGCCTCCGCCACCATGG 62.511 66.667 11.19 11.19 41.55 3.66
3773 6760 3.214123 CATGCCTCCGCCACCATG 61.214 66.667 0.00 0.00 0.00 3.66
3774 6761 4.511246 CCATGCCTCCGCCACCAT 62.511 66.667 0.00 0.00 0.00 3.55
3778 6765 3.993865 TAGACCCATGCCTCCGCCA 62.994 63.158 0.00 0.00 0.00 5.69
3779 6766 3.161450 TAGACCCATGCCTCCGCC 61.161 66.667 0.00 0.00 0.00 6.13
3780 6767 2.423446 CTAGACCCATGCCTCCGC 59.577 66.667 0.00 0.00 0.00 5.54
3781 6768 2.423446 GCTAGACCCATGCCTCCG 59.577 66.667 0.00 0.00 0.00 4.63
3782 6769 2.832498 GGCTAGACCCATGCCTCC 59.168 66.667 0.00 0.00 43.05 4.30
3785 6772 1.449353 CTCAGGCTAGACCCATGCC 59.551 63.158 0.00 0.00 46.42 4.40
3786 6773 1.227793 GCTCAGGCTAGACCCATGC 60.228 63.158 0.00 0.00 40.58 4.06
3787 6774 1.068753 CGCTCAGGCTAGACCCATG 59.931 63.158 0.00 0.00 40.58 3.66
3788 6775 1.381872 ACGCTCAGGCTAGACCCAT 60.382 57.895 0.00 0.00 40.58 4.00
3789 6776 2.037367 ACGCTCAGGCTAGACCCA 59.963 61.111 0.00 0.00 40.58 4.51
3790 6777 2.496817 CACGCTCAGGCTAGACCC 59.503 66.667 0.00 0.00 40.58 4.46
3791 6778 2.496817 CCACGCTCAGGCTAGACC 59.503 66.667 0.00 0.00 39.61 3.85
3811 6798 1.534235 AGAAGAGGACACCGCCAGT 60.534 57.895 0.00 0.00 0.00 4.00
3812 6799 1.079543 CAGAAGAGGACACCGCCAG 60.080 63.158 0.00 0.00 0.00 4.85
3813 6800 1.837051 ACAGAAGAGGACACCGCCA 60.837 57.895 0.00 0.00 0.00 5.69
3814 6801 1.374758 CACAGAAGAGGACACCGCC 60.375 63.158 0.00 0.00 0.00 6.13
3815 6802 1.374758 CCACAGAAGAGGACACCGC 60.375 63.158 0.00 0.00 0.00 5.68
3816 6803 1.374758 GCCACAGAAGAGGACACCG 60.375 63.158 0.00 0.00 0.00 4.94
3817 6804 0.321122 CAGCCACAGAAGAGGACACC 60.321 60.000 0.00 0.00 0.00 4.16
3818 6805 0.321122 CCAGCCACAGAAGAGGACAC 60.321 60.000 0.00 0.00 0.00 3.67
3819 6806 0.764369 ACCAGCCACAGAAGAGGACA 60.764 55.000 0.00 0.00 0.00 4.02
3820 6807 0.398318 AACCAGCCACAGAAGAGGAC 59.602 55.000 0.00 0.00 0.00 3.85
3821 6808 0.397941 CAACCAGCCACAGAAGAGGA 59.602 55.000 0.00 0.00 0.00 3.71
3822 6809 0.607489 CCAACCAGCCACAGAAGAGG 60.607 60.000 0.00 0.00 0.00 3.69
3823 6810 0.397941 TCCAACCAGCCACAGAAGAG 59.602 55.000 0.00 0.00 0.00 2.85
3824 6811 0.397941 CTCCAACCAGCCACAGAAGA 59.602 55.000 0.00 0.00 0.00 2.87
3825 6812 0.397941 TCTCCAACCAGCCACAGAAG 59.602 55.000 0.00 0.00 0.00 2.85
3826 6813 0.108585 GTCTCCAACCAGCCACAGAA 59.891 55.000 0.00 0.00 0.00 3.02
3827 6814 1.053835 TGTCTCCAACCAGCCACAGA 61.054 55.000 0.00 0.00 0.00 3.41
3828 6815 0.604780 CTGTCTCCAACCAGCCACAG 60.605 60.000 0.00 0.00 0.00 3.66
3829 6816 1.053835 TCTGTCTCCAACCAGCCACA 61.054 55.000 0.00 0.00 0.00 4.17
3830 6817 0.321122 CTCTGTCTCCAACCAGCCAC 60.321 60.000 0.00 0.00 0.00 5.01
3831 6818 0.471780 TCTCTGTCTCCAACCAGCCA 60.472 55.000 0.00 0.00 0.00 4.75
3832 6819 0.687354 TTCTCTGTCTCCAACCAGCC 59.313 55.000 0.00 0.00 0.00 4.85
3833 6820 2.037772 TCTTTCTCTGTCTCCAACCAGC 59.962 50.000 0.00 0.00 0.00 4.85
3834 6821 3.576118 TCTCTTTCTCTGTCTCCAACCAG 59.424 47.826 0.00 0.00 0.00 4.00
3835 6822 3.576118 CTCTCTTTCTCTGTCTCCAACCA 59.424 47.826 0.00 0.00 0.00 3.67
3836 6823 3.829601 TCTCTCTTTCTCTGTCTCCAACC 59.170 47.826 0.00 0.00 0.00 3.77
3837 6824 5.461032 TTCTCTCTTTCTCTGTCTCCAAC 57.539 43.478 0.00 0.00 0.00 3.77
3838 6825 5.835819 TCTTTCTCTCTTTCTCTGTCTCCAA 59.164 40.000 0.00 0.00 0.00 3.53
3839 6826 5.389520 TCTTTCTCTCTTTCTCTGTCTCCA 58.610 41.667 0.00 0.00 0.00 3.86
3840 6827 5.975693 TCTTTCTCTCTTTCTCTGTCTCC 57.024 43.478 0.00 0.00 0.00 3.71
3841 6828 8.506168 TCTATCTTTCTCTCTTTCTCTGTCTC 57.494 38.462 0.00 0.00 0.00 3.36
3842 6829 7.067494 GCTCTATCTTTCTCTCTTTCTCTGTCT 59.933 40.741 0.00 0.00 0.00 3.41
3843 6830 7.067494 AGCTCTATCTTTCTCTCTTTCTCTGTC 59.933 40.741 0.00 0.00 0.00 3.51
3844 6831 6.891908 AGCTCTATCTTTCTCTCTTTCTCTGT 59.108 38.462 0.00 0.00 0.00 3.41
3845 6832 7.067372 TCAGCTCTATCTTTCTCTCTTTCTCTG 59.933 40.741 0.00 0.00 0.00 3.35
3846 6833 7.118723 TCAGCTCTATCTTTCTCTCTTTCTCT 58.881 38.462 0.00 0.00 0.00 3.10
3847 6834 7.333528 TCAGCTCTATCTTTCTCTCTTTCTC 57.666 40.000 0.00 0.00 0.00 2.87
3848 6835 6.322201 CCTCAGCTCTATCTTTCTCTCTTTCT 59.678 42.308 0.00 0.00 0.00 2.52
3849 6836 6.321181 TCCTCAGCTCTATCTTTCTCTCTTTC 59.679 42.308 0.00 0.00 0.00 2.62
3850 6837 6.194235 TCCTCAGCTCTATCTTTCTCTCTTT 58.806 40.000 0.00 0.00 0.00 2.52
3851 6838 5.765510 TCCTCAGCTCTATCTTTCTCTCTT 58.234 41.667 0.00 0.00 0.00 2.85
3852 6839 5.387113 TCCTCAGCTCTATCTTTCTCTCT 57.613 43.478 0.00 0.00 0.00 3.10
3853 6840 5.827797 TCTTCCTCAGCTCTATCTTTCTCTC 59.172 44.000 0.00 0.00 0.00 3.20
3854 6841 5.765510 TCTTCCTCAGCTCTATCTTTCTCT 58.234 41.667 0.00 0.00 0.00 3.10
3855 6842 6.461509 CCTTCTTCCTCAGCTCTATCTTTCTC 60.462 46.154 0.00 0.00 0.00 2.87
3856 6843 5.363580 CCTTCTTCCTCAGCTCTATCTTTCT 59.636 44.000 0.00 0.00 0.00 2.52
3857 6844 5.362430 TCCTTCTTCCTCAGCTCTATCTTTC 59.638 44.000 0.00 0.00 0.00 2.62
3858 6845 5.276440 TCCTTCTTCCTCAGCTCTATCTTT 58.724 41.667 0.00 0.00 0.00 2.52
3859 6846 4.877773 TCCTTCTTCCTCAGCTCTATCTT 58.122 43.478 0.00 0.00 0.00 2.40
3860 6847 4.473444 CTCCTTCTTCCTCAGCTCTATCT 58.527 47.826 0.00 0.00 0.00 1.98
3861 6848 3.573967 CCTCCTTCTTCCTCAGCTCTATC 59.426 52.174 0.00 0.00 0.00 2.08
3862 6849 3.052186 ACCTCCTTCTTCCTCAGCTCTAT 60.052 47.826 0.00 0.00 0.00 1.98
3863 6850 2.313342 ACCTCCTTCTTCCTCAGCTCTA 59.687 50.000 0.00 0.00 0.00 2.43
3864 6851 1.078656 ACCTCCTTCTTCCTCAGCTCT 59.921 52.381 0.00 0.00 0.00 4.09
3865 6852 1.206849 CACCTCCTTCTTCCTCAGCTC 59.793 57.143 0.00 0.00 0.00 4.09
3866 6853 1.274712 CACCTCCTTCTTCCTCAGCT 58.725 55.000 0.00 0.00 0.00 4.24
3867 6854 0.392327 GCACCTCCTTCTTCCTCAGC 60.392 60.000 0.00 0.00 0.00 4.26
3868 6855 0.108424 CGCACCTCCTTCTTCCTCAG 60.108 60.000 0.00 0.00 0.00 3.35
3869 6856 0.832135 ACGCACCTCCTTCTTCCTCA 60.832 55.000 0.00 0.00 0.00 3.86
3870 6857 0.390472 CACGCACCTCCTTCTTCCTC 60.390 60.000 0.00 0.00 0.00 3.71
3871 6858 0.832135 TCACGCACCTCCTTCTTCCT 60.832 55.000 0.00 0.00 0.00 3.36
3872 6859 0.390472 CTCACGCACCTCCTTCTTCC 60.390 60.000 0.00 0.00 0.00 3.46
3873 6860 0.390472 CCTCACGCACCTCCTTCTTC 60.390 60.000 0.00 0.00 0.00 2.87
3874 6861 0.832135 TCCTCACGCACCTCCTTCTT 60.832 55.000 0.00 0.00 0.00 2.52
3875 6862 0.616111 ATCCTCACGCACCTCCTTCT 60.616 55.000 0.00 0.00 0.00 2.85
3876 6863 0.460987 CATCCTCACGCACCTCCTTC 60.461 60.000 0.00 0.00 0.00 3.46
3877 6864 0.904865 TCATCCTCACGCACCTCCTT 60.905 55.000 0.00 0.00 0.00 3.36
3878 6865 1.305297 TCATCCTCACGCACCTCCT 60.305 57.895 0.00 0.00 0.00 3.69
3879 6866 1.153549 GTCATCCTCACGCACCTCC 60.154 63.158 0.00 0.00 0.00 4.30
3880 6867 0.459237 CTGTCATCCTCACGCACCTC 60.459 60.000 0.00 0.00 0.00 3.85
3881 6868 0.900182 TCTGTCATCCTCACGCACCT 60.900 55.000 0.00 0.00 0.00 4.00
3882 6869 0.176680 ATCTGTCATCCTCACGCACC 59.823 55.000 0.00 0.00 0.00 5.01
3883 6870 1.284657 CATCTGTCATCCTCACGCAC 58.715 55.000 0.00 0.00 0.00 5.34
3884 6871 0.176449 CCATCTGTCATCCTCACGCA 59.824 55.000 0.00 0.00 0.00 5.24
3885 6872 0.531532 CCCATCTGTCATCCTCACGC 60.532 60.000 0.00 0.00 0.00 5.34
3886 6873 1.114627 TCCCATCTGTCATCCTCACG 58.885 55.000 0.00 0.00 0.00 4.35
3887 6874 1.139853 GGTCCCATCTGTCATCCTCAC 59.860 57.143 0.00 0.00 0.00 3.51
3888 6875 1.008815 AGGTCCCATCTGTCATCCTCA 59.991 52.381 0.00 0.00 0.00 3.86
3889 6876 1.799933 AGGTCCCATCTGTCATCCTC 58.200 55.000 0.00 0.00 0.00 3.71
3890 6877 3.246301 CATAGGTCCCATCTGTCATCCT 58.754 50.000 0.00 0.00 0.00 3.24
3891 6878 2.975489 ACATAGGTCCCATCTGTCATCC 59.025 50.000 0.00 0.00 0.00 3.51
3892 6879 4.264460 GACATAGGTCCCATCTGTCATC 57.736 50.000 0.00 0.00 38.12 2.92
3904 6891 1.490574 AGCTGAGGTGGACATAGGTC 58.509 55.000 0.00 0.00 43.55 3.85
3905 6892 2.848678 TAGCTGAGGTGGACATAGGT 57.151 50.000 0.00 0.00 0.00 3.08
3906 6893 4.384056 CAATTAGCTGAGGTGGACATAGG 58.616 47.826 0.00 0.00 0.00 2.57
3907 6894 3.812053 GCAATTAGCTGAGGTGGACATAG 59.188 47.826 0.00 0.00 41.15 2.23
3908 6895 3.199727 TGCAATTAGCTGAGGTGGACATA 59.800 43.478 0.00 0.00 45.94 2.29
3909 6896 2.025981 TGCAATTAGCTGAGGTGGACAT 60.026 45.455 0.00 0.00 45.94 3.06
3910 6897 1.350684 TGCAATTAGCTGAGGTGGACA 59.649 47.619 0.00 0.00 45.94 4.02
3911 6898 2.012673 CTGCAATTAGCTGAGGTGGAC 58.987 52.381 0.00 0.00 44.15 4.02
3912 6899 1.908619 TCTGCAATTAGCTGAGGTGGA 59.091 47.619 0.00 0.00 44.91 4.02
3913 6900 2.408271 TCTGCAATTAGCTGAGGTGG 57.592 50.000 0.00 0.00 44.91 4.61
3919 6906 3.366070 GCATGCCTATCTGCAATTAGCTG 60.366 47.826 6.36 0.00 45.84 4.24
3920 6907 2.818432 GCATGCCTATCTGCAATTAGCT 59.182 45.455 6.36 0.00 45.84 3.32
3921 6908 2.094854 GGCATGCCTATCTGCAATTAGC 60.095 50.000 29.98 0.00 45.84 3.09
3922 6909 3.057736 GTGGCATGCCTATCTGCAATTAG 60.058 47.826 35.53 0.00 45.84 1.73
3923 6910 2.886523 GTGGCATGCCTATCTGCAATTA 59.113 45.455 35.53 9.65 45.84 1.40
3924 6911 1.684983 GTGGCATGCCTATCTGCAATT 59.315 47.619 35.53 0.00 45.84 2.32
3925 6912 1.325355 GTGGCATGCCTATCTGCAAT 58.675 50.000 35.53 0.00 45.84 3.56
3926 6913 0.034283 TGTGGCATGCCTATCTGCAA 60.034 50.000 35.53 11.81 45.84 4.08
3927 6914 0.184211 ATGTGGCATGCCTATCTGCA 59.816 50.000 35.53 22.83 46.94 4.41
3928 6915 1.000607 CAATGTGGCATGCCTATCTGC 60.001 52.381 35.53 18.58 37.66 4.26
3929 6916 2.292569 GACAATGTGGCATGCCTATCTG 59.707 50.000 35.53 26.96 36.94 2.90
3930 6917 2.174210 AGACAATGTGGCATGCCTATCT 59.826 45.455 35.53 23.55 36.94 1.98
3931 6918 2.579873 AGACAATGTGGCATGCCTATC 58.420 47.619 35.53 24.66 36.94 2.08
3932 6919 2.691526 CAAGACAATGTGGCATGCCTAT 59.308 45.455 35.53 25.90 36.94 2.57
3933 6920 2.093890 CAAGACAATGTGGCATGCCTA 58.906 47.619 35.53 24.89 36.94 3.93
3934 6921 0.892755 CAAGACAATGTGGCATGCCT 59.107 50.000 35.53 16.22 36.94 4.75
3935 6922 0.889994 TCAAGACAATGTGGCATGCC 59.110 50.000 30.54 30.54 0.00 4.40
3936 6923 2.953466 ATCAAGACAATGTGGCATGC 57.047 45.000 9.90 9.90 0.00 4.06
3937 6924 3.949754 ACCTATCAAGACAATGTGGCATG 59.050 43.478 0.00 0.00 0.00 4.06
3938 6925 3.949754 CACCTATCAAGACAATGTGGCAT 59.050 43.478 0.00 0.00 0.00 4.40
3939 6926 3.346315 CACCTATCAAGACAATGTGGCA 58.654 45.455 0.00 0.00 0.00 4.92
3940 6927 2.684881 CCACCTATCAAGACAATGTGGC 59.315 50.000 0.00 0.00 35.81 5.01
3941 6928 3.282021 CCCACCTATCAAGACAATGTGG 58.718 50.000 0.00 0.00 41.07 4.17
3942 6929 2.684881 GCCCACCTATCAAGACAATGTG 59.315 50.000 0.00 0.00 0.00 3.21
3943 6930 2.357154 GGCCCACCTATCAAGACAATGT 60.357 50.000 0.00 0.00 0.00 2.71
3944 6931 2.301346 GGCCCACCTATCAAGACAATG 58.699 52.381 0.00 0.00 0.00 2.82
3945 6932 1.215423 GGGCCCACCTATCAAGACAAT 59.785 52.381 19.95 0.00 35.85 2.71
3946 6933 0.623723 GGGCCCACCTATCAAGACAA 59.376 55.000 19.95 0.00 35.85 3.18
3947 6934 2.307153 GGGCCCACCTATCAAGACA 58.693 57.895 19.95 0.00 35.85 3.41
3957 6944 2.609610 TGACAGGTAGGGCCCACC 60.610 66.667 27.56 27.33 38.26 4.61
3958 6945 1.489560 AACTGACAGGTAGGGCCCAC 61.490 60.000 27.56 19.64 38.26 4.61
3959 6946 0.770557 AAACTGACAGGTAGGGCCCA 60.771 55.000 27.56 7.27 38.26 5.36
3960 6947 0.035343 GAAACTGACAGGTAGGGCCC 60.035 60.000 16.46 16.46 38.26 5.80
3961 6948 0.690762 TGAAACTGACAGGTAGGGCC 59.309 55.000 7.51 0.00 37.58 5.80
3962 6949 1.809684 GTGAAACTGACAGGTAGGGC 58.190 55.000 7.51 0.00 0.00 5.19
3975 6962 7.097570 CGAATTTACTCACGAAAACAGTGAAAC 60.098 37.037 0.00 0.00 46.43 2.78
3976 6963 6.902948 CGAATTTACTCACGAAAACAGTGAAA 59.097 34.615 0.00 0.00 46.43 2.69
3977 6964 6.256104 TCGAATTTACTCACGAAAACAGTGAA 59.744 34.615 0.00 0.00 46.43 3.18
3978 6965 5.749588 TCGAATTTACTCACGAAAACAGTGA 59.250 36.000 0.00 0.00 45.23 3.41
3979 6966 5.839239 GTCGAATTTACTCACGAAAACAGTG 59.161 40.000 0.00 0.00 40.71 3.66
3980 6967 5.332055 CGTCGAATTTACTCACGAAAACAGT 60.332 40.000 0.00 0.00 36.57 3.55
3981 6968 5.064367 CGTCGAATTTACTCACGAAAACAG 58.936 41.667 0.00 0.00 36.57 3.16
3982 6969 4.739228 TCGTCGAATTTACTCACGAAAACA 59.261 37.500 0.00 0.00 36.59 2.83
3983 6970 5.108103 ACTCGTCGAATTTACTCACGAAAAC 60.108 40.000 0.00 0.00 38.90 2.43
3984 6971 4.977963 ACTCGTCGAATTTACTCACGAAAA 59.022 37.500 0.00 0.00 38.90 2.29
3985 6972 4.380678 CACTCGTCGAATTTACTCACGAAA 59.619 41.667 0.00 0.00 38.90 3.46
3986 6973 3.910170 CACTCGTCGAATTTACTCACGAA 59.090 43.478 0.00 0.00 38.90 3.85
3987 6974 3.485633 CACTCGTCGAATTTACTCACGA 58.514 45.455 0.00 0.00 37.85 4.35
3988 6975 2.026507 GCACTCGTCGAATTTACTCACG 59.973 50.000 0.00 0.00 0.00 4.35
3989 6976 3.243336 AGCACTCGTCGAATTTACTCAC 58.757 45.455 0.00 0.00 0.00 3.51
3990 6977 3.499048 GAGCACTCGTCGAATTTACTCA 58.501 45.455 0.00 0.00 0.00 3.41
3991 6978 2.526688 CGAGCACTCGTCGAATTTACTC 59.473 50.000 11.82 0.00 46.99 2.59
3992 6979 2.516923 CGAGCACTCGTCGAATTTACT 58.483 47.619 11.82 0.00 46.99 2.24
3993 6980 2.953806 CGAGCACTCGTCGAATTTAC 57.046 50.000 11.82 0.00 46.99 2.01
4004 6991 5.462405 CCTAACCTATAATGTCGAGCACTC 58.538 45.833 0.00 0.00 0.00 3.51
4005 6992 4.262079 GCCTAACCTATAATGTCGAGCACT 60.262 45.833 0.00 0.00 0.00 4.40
4006 6993 3.988517 GCCTAACCTATAATGTCGAGCAC 59.011 47.826 0.00 0.00 0.00 4.40
4007 6994 3.305131 CGCCTAACCTATAATGTCGAGCA 60.305 47.826 0.00 0.00 0.00 4.26
4008 6995 3.243336 CGCCTAACCTATAATGTCGAGC 58.757 50.000 0.00 0.00 0.00 5.03
4009 6996 3.243336 GCGCCTAACCTATAATGTCGAG 58.757 50.000 0.00 0.00 0.00 4.04
4010 6997 2.624364 TGCGCCTAACCTATAATGTCGA 59.376 45.455 4.18 0.00 0.00 4.20
4011 6998 3.021269 TGCGCCTAACCTATAATGTCG 57.979 47.619 4.18 0.00 0.00 4.35
4012 6999 7.414098 CCAATTATGCGCCTAACCTATAATGTC 60.414 40.741 4.18 0.00 0.00 3.06
4013 7000 6.374333 CCAATTATGCGCCTAACCTATAATGT 59.626 38.462 4.18 0.00 0.00 2.71
4014 7001 6.374333 ACCAATTATGCGCCTAACCTATAATG 59.626 38.462 4.18 0.00 0.00 1.90
4015 7002 6.374333 CACCAATTATGCGCCTAACCTATAAT 59.626 38.462 4.18 2.86 0.00 1.28
4016 7003 5.703592 CACCAATTATGCGCCTAACCTATAA 59.296 40.000 4.18 0.12 0.00 0.98
4017 7004 5.242434 CACCAATTATGCGCCTAACCTATA 58.758 41.667 4.18 0.00 0.00 1.31
4018 7005 4.072131 CACCAATTATGCGCCTAACCTAT 58.928 43.478 4.18 0.00 0.00 2.57
4019 7006 3.472652 CACCAATTATGCGCCTAACCTA 58.527 45.455 4.18 0.00 0.00 3.08
4020 7007 2.297701 CACCAATTATGCGCCTAACCT 58.702 47.619 4.18 0.00 0.00 3.50
4021 7008 1.336755 CCACCAATTATGCGCCTAACC 59.663 52.381 4.18 0.00 0.00 2.85
4022 7009 2.021457 ACCACCAATTATGCGCCTAAC 58.979 47.619 4.18 0.00 0.00 2.34
4023 7010 2.428544 ACCACCAATTATGCGCCTAA 57.571 45.000 4.18 6.20 0.00 2.69
4024 7011 2.428544 AACCACCAATTATGCGCCTA 57.571 45.000 4.18 0.00 0.00 3.93
4025 7012 1.555967 AAACCACCAATTATGCGCCT 58.444 45.000 4.18 0.00 0.00 5.52
4026 7013 2.378445 AAAACCACCAATTATGCGCC 57.622 45.000 4.18 0.00 0.00 6.53
4067 7054 4.020839 TGAGCTAGGGTAACAACTTGGTAC 60.021 45.833 8.29 8.29 39.74 3.34
4068 7055 4.161876 TGAGCTAGGGTAACAACTTGGTA 58.838 43.478 0.00 0.00 39.74 3.25
4069 7056 2.976882 TGAGCTAGGGTAACAACTTGGT 59.023 45.455 0.00 0.00 39.74 3.67
4070 7057 3.695830 TGAGCTAGGGTAACAACTTGG 57.304 47.619 0.00 0.00 39.74 3.61
4071 7058 4.452455 CACTTGAGCTAGGGTAACAACTTG 59.548 45.833 0.00 0.00 39.74 3.16
4072 7059 4.102681 ACACTTGAGCTAGGGTAACAACTT 59.897 41.667 0.00 0.00 39.74 2.66
4073 7060 3.646637 ACACTTGAGCTAGGGTAACAACT 59.353 43.478 0.00 0.00 39.74 3.16
4074 7061 3.746492 CACACTTGAGCTAGGGTAACAAC 59.254 47.826 0.00 0.00 39.74 3.32
4075 7062 3.644265 TCACACTTGAGCTAGGGTAACAA 59.356 43.478 0.00 0.00 39.74 2.83
4076 7063 3.236047 TCACACTTGAGCTAGGGTAACA 58.764 45.455 0.00 0.00 39.74 2.41
4077 7064 3.955650 TCACACTTGAGCTAGGGTAAC 57.044 47.619 0.00 0.00 28.59 2.50
4078 7065 3.197766 CCATCACACTTGAGCTAGGGTAA 59.802 47.826 0.00 0.00 34.35 2.85
4079 7066 2.766263 CCATCACACTTGAGCTAGGGTA 59.234 50.000 0.00 0.00 34.35 3.69
4080 7067 1.556911 CCATCACACTTGAGCTAGGGT 59.443 52.381 0.00 0.00 34.35 4.34
4081 7068 1.556911 ACCATCACACTTGAGCTAGGG 59.443 52.381 0.00 0.00 34.35 3.53
4082 7069 2.499289 AGACCATCACACTTGAGCTAGG 59.501 50.000 0.00 0.00 34.35 3.02
4083 7070 3.883830 AGACCATCACACTTGAGCTAG 57.116 47.619 0.00 0.00 34.35 3.42
4084 7071 3.866066 GCAAGACCATCACACTTGAGCTA 60.866 47.826 0.00 0.00 42.12 3.32
4085 7072 2.775890 CAAGACCATCACACTTGAGCT 58.224 47.619 0.00 0.00 42.12 4.09
4086 7073 1.198637 GCAAGACCATCACACTTGAGC 59.801 52.381 0.00 0.00 42.12 4.26
4087 7074 1.462283 CGCAAGACCATCACACTTGAG 59.538 52.381 0.00 0.00 42.12 3.02
4088 7075 1.202639 ACGCAAGACCATCACACTTGA 60.203 47.619 0.00 0.00 42.12 3.02
4089 7076 1.229428 ACGCAAGACCATCACACTTG 58.771 50.000 0.00 0.00 42.33 3.16
4090 7077 2.831685 TACGCAAGACCATCACACTT 57.168 45.000 0.00 0.00 43.62 3.16
4091 7078 2.831685 TTACGCAAGACCATCACACT 57.168 45.000 0.00 0.00 43.62 3.55
4092 7079 4.630069 ACTATTTACGCAAGACCATCACAC 59.370 41.667 0.00 0.00 43.62 3.82
4093 7080 4.827692 ACTATTTACGCAAGACCATCACA 58.172 39.130 0.00 0.00 43.62 3.58
4094 7081 5.581085 AGAACTATTTACGCAAGACCATCAC 59.419 40.000 0.00 0.00 43.62 3.06
4095 7082 5.730550 AGAACTATTTACGCAAGACCATCA 58.269 37.500 0.00 0.00 43.62 3.07
4096 7083 6.979238 ACTAGAACTATTTACGCAAGACCATC 59.021 38.462 0.00 0.00 43.62 3.51
4097 7084 6.875076 ACTAGAACTATTTACGCAAGACCAT 58.125 36.000 0.00 0.00 43.62 3.55
4098 7085 6.276832 ACTAGAACTATTTACGCAAGACCA 57.723 37.500 0.00 0.00 43.62 4.02
4099 7086 7.431668 CACTACTAGAACTATTTACGCAAGACC 59.568 40.741 0.00 0.00 43.62 3.85
4100 7087 8.180267 TCACTACTAGAACTATTTACGCAAGAC 58.820 37.037 0.00 0.00 43.62 3.01
4101 7088 8.272545 TCACTACTAGAACTATTTACGCAAGA 57.727 34.615 0.00 0.00 43.62 3.02
4103 7090 9.865321 ATTTCACTACTAGAACTATTTACGCAA 57.135 29.630 0.00 0.00 0.00 4.85
4233 7307 4.770010 GGTGTCCTTTCCCATGTTCATAAA 59.230 41.667 0.00 0.00 0.00 1.40
4247 7321 1.077265 CATGGGCAGGGTGTCCTTT 59.923 57.895 0.00 0.00 44.07 3.11
4449 7547 6.046286 ACCCTGAAGAGTTTTTATTAAGGGGA 59.954 38.462 10.68 0.00 45.14 4.81
4571 16341 6.645415 AGTCGAACCAAGTTTCTATGTTGTAG 59.355 38.462 0.00 0.00 0.00 2.74
4799 16577 1.694696 AGTCCTCTCGCAACTCCTTTT 59.305 47.619 0.00 0.00 0.00 2.27
4805 16583 1.333177 ACAGAAGTCCTCTCGCAACT 58.667 50.000 0.00 0.00 29.07 3.16
4838 16616 6.865726 CCCGATGAATTATAGTCAGTCTTGAG 59.134 42.308 0.00 0.00 32.98 3.02
4860 16638 0.392461 TTTCCGGCTTTCAGATCCCG 60.392 55.000 0.00 0.00 40.39 5.14
4868 16646 5.525199 TCTAACAAAACATTTCCGGCTTTC 58.475 37.500 0.00 0.00 0.00 2.62
4913 16691 2.475466 CGCCATGCCGAAATCTGCT 61.475 57.895 0.00 0.00 0.00 4.24
4925 16703 2.358957 TCACAGAAAATCCTCGCCATG 58.641 47.619 0.00 0.00 0.00 3.66
4937 16715 6.577103 TGCATTTTGTTGGTTATCACAGAAA 58.423 32.000 0.00 0.00 0.00 2.52
5035 16814 7.990886 GTCACAAGAATTAGTGAATGGGGTATA 59.009 37.037 8.82 0.00 45.38 1.47
5061 16840 1.068055 GCCACTTCTTGACCATTGCAG 60.068 52.381 0.00 0.00 0.00 4.41
5299 17100 5.943416 TCCACGTATTCCATGACTGAAAAAT 59.057 36.000 0.00 0.00 0.00 1.82
5301 17102 4.900684 TCCACGTATTCCATGACTGAAAA 58.099 39.130 0.00 0.00 0.00 2.29
5318 17119 0.685097 TGTCTTCCCTTCCTTCCACG 59.315 55.000 0.00 0.00 0.00 4.94
5355 17156 8.212995 TCCAAAGAATGAGTATTCATGATAGCA 58.787 33.333 0.92 0.00 43.20 3.49
5356 17157 8.613060 TCCAAAGAATGAGTATTCATGATAGC 57.387 34.615 0.92 0.00 43.20 2.97
5391 17192 1.001974 AGTGCTACATGGACGCAAAGA 59.998 47.619 7.29 0.00 42.15 2.52
5475 17276 1.594331 GAAGTGTGGAGCTTCCGTTT 58.406 50.000 0.00 0.00 40.17 3.60
5533 17340 7.464273 TCATCTATGATTTGCTCCATTGGTAT 58.536 34.615 1.86 0.00 0.00 2.73
5591 17404 0.465705 TCACCTCCCATGAATCTCGC 59.534 55.000 0.00 0.00 0.00 5.03
5623 17436 3.067601 GGAAATTTGGGTTGACGTGTCTT 59.932 43.478 0.00 0.00 0.00 3.01
5674 17487 8.894768 ATACAAAGCAAGATATAGTGACTTCC 57.105 34.615 0.00 0.00 0.00 3.46
5715 17528 3.838565 TCCCAAGTCAATAAGGCAAACA 58.161 40.909 0.00 0.00 0.00 2.83
5796 17611 6.872920 TGCACACAAATCCCTTATATTTTCC 58.127 36.000 0.00 0.00 0.00 3.13
5844 17659 5.241506 GGATCTGATCAAGGTTTGTGAACAA 59.758 40.000 18.64 0.00 37.51 2.83
5861 17676 4.021104 ACAGACAAATTCGTCAGGATCTGA 60.021 41.667 0.00 0.00 38.25 3.27
5864 17679 3.619038 GGACAGACAAATTCGTCAGGATC 59.381 47.826 0.00 0.00 38.43 3.36
5872 17687 5.718649 ATGATTACGGACAGACAAATTCG 57.281 39.130 0.00 0.00 0.00 3.34
5873 17688 7.970384 TGTAATGATTACGGACAGACAAATTC 58.030 34.615 10.43 0.00 38.98 2.17
5887 17702 8.758633 ACAACTGTGTCTACTGTAATGATTAC 57.241 34.615 8.35 8.35 37.92 1.89
5896 17711 5.127194 TCTCAAGAACAACTGTGTCTACTGT 59.873 40.000 0.00 0.00 40.21 3.55
5902 17717 3.247173 CAGCTCTCAAGAACAACTGTGTC 59.753 47.826 0.00 0.00 36.80 3.67
5906 17721 2.492012 AGCAGCTCTCAAGAACAACTG 58.508 47.619 0.00 0.00 0.00 3.16
5911 17726 7.176285 CTAATGATTAGCAGCTCTCAAGAAC 57.824 40.000 0.00 0.00 0.00 3.01
5946 17761 5.234543 AGAGAAAGAAAGCAGTAAACGTGTC 59.765 40.000 0.00 0.00 0.00 3.67
5949 17764 4.024809 GCAGAGAAAGAAAGCAGTAAACGT 60.025 41.667 0.00 0.00 0.00 3.99
6000 17815 6.431198 AAACCGAATAAATAGAACACGCAT 57.569 33.333 0.00 0.00 0.00 4.73
6003 17818 9.933175 CGATATAAACCGAATAAATAGAACACG 57.067 33.333 0.00 0.00 0.00 4.49
6028 17843 7.844169 CAGTATCAATAATGTACAAACCGAACG 59.156 37.037 0.00 0.00 0.00 3.95
6063 17878 9.936759 CCAACACCAAACCATATTTTAATTACT 57.063 29.630 0.00 0.00 0.00 2.24
6199 18146 8.652290 CCATTCCTAGGAAGCTTAGTAATTAGT 58.348 37.037 27.58 4.62 37.56 2.24
6242 18189 2.091555 ACCAACAACCCTTCAAAGCCTA 60.092 45.455 0.00 0.00 0.00 3.93
6245 18192 1.202521 CCACCAACAACCCTTCAAAGC 60.203 52.381 0.00 0.00 0.00 3.51
6258 18205 2.061182 TTACAAACGGCGCCACCAAC 62.061 55.000 28.98 0.00 39.03 3.77
6261 18208 1.908066 CTCTTACAAACGGCGCCACC 61.908 60.000 28.98 0.00 0.00 4.61
6262 18209 1.226030 ACTCTTACAAACGGCGCCAC 61.226 55.000 28.98 0.00 0.00 5.01
6266 18213 1.779569 ACTCACTCTTACAAACGGCG 58.220 50.000 4.80 4.80 0.00 6.46
6291 18238 1.428869 AGACCCATATCCACTCAGGC 58.571 55.000 0.00 0.00 37.29 4.85
6307 18254 5.696724 ACGCCACAATTATCTGCTAATAGAC 59.303 40.000 0.00 0.00 29.63 2.59
6311 18258 4.512944 CAGACGCCACAATTATCTGCTAAT 59.487 41.667 0.00 0.00 31.14 1.73
6324 18271 1.485294 AACCCCATACAGACGCCACA 61.485 55.000 0.00 0.00 0.00 4.17
6325 18272 0.743345 GAACCCCATACAGACGCCAC 60.743 60.000 0.00 0.00 0.00 5.01
6382 18329 8.572828 TTCATTTGTTGTTGTGATGTCATTAC 57.427 30.769 0.82 0.82 0.00 1.89
6386 18333 7.014134 ACCTATTCATTTGTTGTTGTGATGTCA 59.986 33.333 0.00 0.00 0.00 3.58
6408 18355 3.547746 GTGTTTTTGGTGGAGTGACCTA 58.452 45.455 0.00 0.00 39.86 3.08
6410 18357 1.407618 GGTGTTTTTGGTGGAGTGACC 59.592 52.381 0.00 0.00 39.54 4.02
6423 18370 7.870445 GTGTTTGTGGACAATATATGGTGTTTT 59.130 33.333 0.00 0.00 35.55 2.43
6436 18383 1.673400 CGACATGGTGTTTGTGGACAA 59.327 47.619 0.00 0.00 0.00 3.18
6453 18404 6.306837 TGATTGTGTTGTTTCTTTTTGTCGAC 59.693 34.615 9.11 9.11 0.00 4.20
6463 18414 9.467258 CTTGTTGATTATGATTGTGTTGTTTCT 57.533 29.630 0.00 0.00 0.00 2.52
6490 18441 5.777223 TGGGTTGTCATTCAATTATGGTTGA 59.223 36.000 0.00 0.00 38.38 3.18
6508 18459 2.198426 ACCTGGCCTGTTGGGTTG 59.802 61.111 3.32 0.00 37.43 3.77
6509 18460 1.943730 TTCACCTGGCCTGTTGGGTT 61.944 55.000 3.32 0.00 37.43 4.11
6510 18461 1.943730 TTTCACCTGGCCTGTTGGGT 61.944 55.000 3.32 1.53 37.43 4.51
6511 18462 1.152567 TTTCACCTGGCCTGTTGGG 60.153 57.895 3.32 0.84 38.36 4.12
6512 18463 1.795170 CGTTTCACCTGGCCTGTTGG 61.795 60.000 3.32 3.56 0.00 3.77
6513 18464 1.654220 CGTTTCACCTGGCCTGTTG 59.346 57.895 3.32 1.60 0.00 3.33
6514 18465 2.193536 GCGTTTCACCTGGCCTGTT 61.194 57.895 3.32 0.00 0.00 3.16
6515 18466 2.594592 GCGTTTCACCTGGCCTGT 60.595 61.111 3.32 0.00 0.00 4.00
6516 18467 2.594303 TGCGTTTCACCTGGCCTG 60.594 61.111 3.32 2.54 0.00 4.85
6517 18468 2.594592 GTGCGTTTCACCTGGCCT 60.595 61.111 3.32 0.00 39.79 5.19
6518 18469 2.904866 TGTGCGTTTCACCTGGCC 60.905 61.111 0.00 0.00 45.03 5.36
6519 18470 2.639286 CTGTGCGTTTCACCTGGC 59.361 61.111 0.00 0.00 45.03 4.85
6520 18471 1.723608 TTGCTGTGCGTTTCACCTGG 61.724 55.000 0.00 0.00 45.03 4.45
6521 18472 0.317269 CTTGCTGTGCGTTTCACCTG 60.317 55.000 0.00 0.00 45.03 4.00
6522 18473 2.024918 CTTGCTGTGCGTTTCACCT 58.975 52.632 0.00 0.00 45.03 4.00
6523 18474 1.658409 GCTTGCTGTGCGTTTCACC 60.658 57.895 0.00 0.00 45.03 4.02
6524 18475 1.658409 GGCTTGCTGTGCGTTTCAC 60.658 57.895 0.00 0.00 45.82 3.18
6525 18476 2.062361 CTGGCTTGCTGTGCGTTTCA 62.062 55.000 0.00 0.00 0.00 2.69
6526 18477 1.370900 CTGGCTTGCTGTGCGTTTC 60.371 57.895 0.00 0.00 0.00 2.78
6527 18478 2.723746 CTGGCTTGCTGTGCGTTT 59.276 55.556 0.00 0.00 0.00 3.60
6528 18479 3.969802 GCTGGCTTGCTGTGCGTT 61.970 61.111 0.00 0.00 0.00 4.84
6530 18481 4.400109 CTGCTGGCTTGCTGTGCG 62.400 66.667 4.89 0.00 0.00 5.34
6531 18482 1.518056 TTACTGCTGGCTTGCTGTGC 61.518 55.000 19.23 0.00 43.23 4.57
6532 18483 1.171308 ATTACTGCTGGCTTGCTGTG 58.829 50.000 19.23 7.40 43.23 3.66
6533 18484 2.237143 TCTATTACTGCTGGCTTGCTGT 59.763 45.455 16.12 16.12 44.90 4.40
6534 18485 2.910199 TCTATTACTGCTGGCTTGCTG 58.090 47.619 7.95 7.95 37.79 4.41
6535 18486 3.853355 ATCTATTACTGCTGGCTTGCT 57.147 42.857 0.00 0.00 0.00 3.91
6536 18487 3.629398 ACAATCTATTACTGCTGGCTTGC 59.371 43.478 0.00 0.00 0.00 4.01
6537 18488 4.036027 CCACAATCTATTACTGCTGGCTTG 59.964 45.833 0.00 0.00 0.00 4.01
6538 18489 4.202441 CCACAATCTATTACTGCTGGCTT 58.798 43.478 0.00 0.00 0.00 4.35
6539 18490 3.200825 ACCACAATCTATTACTGCTGGCT 59.799 43.478 0.00 0.00 0.00 4.75
6540 18491 3.545703 ACCACAATCTATTACTGCTGGC 58.454 45.455 0.00 0.00 0.00 4.85
6541 18492 5.670485 TGTACCACAATCTATTACTGCTGG 58.330 41.667 0.00 0.00 0.00 4.85
6542 18493 7.609760 TTTGTACCACAATCTATTACTGCTG 57.390 36.000 0.00 0.00 38.00 4.41
6543 18494 8.807948 ATTTTGTACCACAATCTATTACTGCT 57.192 30.769 0.00 0.00 38.00 4.24
6552 18503 9.362151 TCCTCTTTTTATTTTGTACCACAATCT 57.638 29.630 0.00 0.00 38.00 2.40
6553 18504 9.974980 TTCCTCTTTTTATTTTGTACCACAATC 57.025 29.630 0.00 0.00 38.00 2.67
6554 18505 9.758651 GTTCCTCTTTTTATTTTGTACCACAAT 57.241 29.630 0.00 0.00 38.00 2.71
6555 18506 8.750298 TGTTCCTCTTTTTATTTTGTACCACAA 58.250 29.630 0.00 0.00 36.11 3.33
6556 18507 8.294954 TGTTCCTCTTTTTATTTTGTACCACA 57.705 30.769 0.00 0.00 0.00 4.17
6557 18508 9.191995 CATGTTCCTCTTTTTATTTTGTACCAC 57.808 33.333 0.00 0.00 0.00 4.16
6558 18509 8.919145 ACATGTTCCTCTTTTTATTTTGTACCA 58.081 29.630 0.00 0.00 0.00 3.25
6570 18521 8.844244 GCATGAATCTATACATGTTCCTCTTTT 58.156 33.333 2.30 0.00 43.67 2.27
6573 18524 6.271857 AGGCATGAATCTATACATGTTCCTCT 59.728 38.462 2.30 0.00 43.67 3.69
6576 18527 6.072286 CCAAGGCATGAATCTATACATGTTCC 60.072 42.308 2.30 0.00 43.67 3.62
6584 18535 5.052693 AGCAACCAAGGCATGAATCTATA 57.947 39.130 0.00 0.00 0.00 1.31
6585 18536 3.907221 AGCAACCAAGGCATGAATCTAT 58.093 40.909 0.00 0.00 0.00 1.98
6586 18537 3.370840 AGCAACCAAGGCATGAATCTA 57.629 42.857 0.00 0.00 0.00 1.98
6588 18539 3.019564 ACTAGCAACCAAGGCATGAATC 58.980 45.455 0.00 0.00 0.00 2.52
6589 18540 3.091633 ACTAGCAACCAAGGCATGAAT 57.908 42.857 0.00 0.00 0.00 2.57
6590 18541 2.584835 ACTAGCAACCAAGGCATGAA 57.415 45.000 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.