Multiple sequence alignment - TraesCS3D01G022400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G022400 chr3D 100.000 9901 0 0 1 9901 7218253 7228153 0.000000e+00 18284.0
1 TraesCS3D01G022400 chr3B 92.373 4143 190 53 921 4993 8804228 8808314 0.000000e+00 5784.0
2 TraesCS3D01G022400 chr3B 93.331 3509 156 27 6432 9901 8809563 8813032 0.000000e+00 5112.0
3 TraesCS3D01G022400 chr3B 92.194 679 41 6 5670 6339 8808883 8809558 0.000000e+00 950.0
4 TraesCS3D01G022400 chr3B 86.275 765 70 17 33 773 8802998 8803751 0.000000e+00 798.0
5 TraesCS3D01G022400 chr3B 90.144 487 32 6 5196 5671 8808312 8808793 3.930000e-173 619.0
6 TraesCS3D01G022400 chr3B 85.714 217 25 6 1042 1256 668450195 668450407 3.600000e-54 224.0
7 TraesCS3D01G022400 chr3B 85.253 217 26 6 1042 1256 575625242 575625454 1.670000e-52 219.0
8 TraesCS3D01G022400 chr3B 86.145 166 22 1 1094 1259 321284006 321283842 2.840000e-40 178.0
9 TraesCS3D01G022400 chr3B 78.930 299 27 20 1399 1694 41751622 41751887 4.760000e-38 171.0
10 TraesCS3D01G022400 chr3B 78.595 299 24 22 1399 1694 668450535 668450796 2.860000e-35 161.0
11 TraesCS3D01G022400 chr3B 81.538 195 27 8 111 300 177170691 177170881 1.720000e-32 152.0
12 TraesCS3D01G022400 chr3B 91.000 100 9 0 6336 6435 114098822 114098921 1.730000e-27 135.0
13 TraesCS3D01G022400 chr3A 90.212 2360 117 53 921 3238 13044311 13042024 0.000000e+00 2974.0
14 TraesCS3D01G022400 chr3A 90.791 1998 117 32 7929 9901 13037031 13035076 0.000000e+00 2608.0
15 TraesCS3D01G022400 chr3A 95.137 1501 61 6 6432 7931 13038560 13037071 0.000000e+00 2357.0
16 TraesCS3D01G022400 chr3A 92.083 1642 87 20 4037 5670 13040920 13039314 0.000000e+00 2272.0
17 TraesCS3D01G022400 chr3A 96.015 803 23 3 3239 4040 13041993 13041199 0.000000e+00 1297.0
18 TraesCS3D01G022400 chr3A 91.605 679 37 8 5670 6339 13039225 13038558 0.000000e+00 920.0
19 TraesCS3D01G022400 chr3A 86.242 596 48 14 52 625 13045084 13044501 5.080000e-172 616.0
20 TraesCS3D01G022400 chr3A 86.420 243 28 4 1042 1279 592201861 592201619 2.740000e-65 261.0
21 TraesCS3D01G022400 chr3A 84.553 246 30 5 1042 1279 592137163 592136918 4.620000e-58 237.0
22 TraesCS3D01G022400 chr3A 88.793 116 8 5 804 915 13044478 13044364 4.820000e-28 137.0
23 TraesCS3D01G022400 chr3A 85.593 118 16 1 6328 6445 25119434 25119318 1.350000e-23 122.0
24 TraesCS3D01G022400 chr4B 76.506 664 87 45 1042 1694 310203799 310204404 2.090000e-76 298.0
25 TraesCS3D01G022400 chr4B 92.000 100 8 0 6335 6434 27929182 27929281 3.730000e-29 141.0
26 TraesCS3D01G022400 chr4B 90.000 100 10 0 6338 6437 511163805 511163706 8.070000e-26 130.0
27 TraesCS3D01G022400 chr6B 88.018 217 23 2 1042 1256 576449317 576449532 4.590000e-63 254.0
28 TraesCS3D01G022400 chr6B 81.818 264 32 5 46 294 618940756 618940494 3.620000e-49 207.0
29 TraesCS3D01G022400 chr6B 82.278 237 32 8 69 297 171787699 171787465 7.850000e-46 196.0
30 TraesCS3D01G022400 chr6B 78.261 299 25 22 1399 1694 576449660 576449921 1.330000e-33 156.0
31 TraesCS3D01G022400 chr6B 82.759 116 12 6 1428 1541 89189568 89189677 8.190000e-16 97.1
32 TraesCS3D01G022400 chr1B 84.328 268 26 3 46 298 457467680 457467946 2.140000e-61 248.0
33 TraesCS3D01G022400 chr4D 78.114 297 31 15 1399 1694 143862514 143862777 3.700000e-34 158.0
34 TraesCS3D01G022400 chr4D 90.099 101 9 1 6338 6437 414999659 414999559 8.070000e-26 130.0
35 TraesCS3D01G022400 chr7B 91.150 113 8 2 6332 6443 162120914 162120803 1.720000e-32 152.0
36 TraesCS3D01G022400 chr7B 81.720 186 30 4 115 298 680110999 680111182 1.720000e-32 152.0
37 TraesCS3D01G022400 chr7A 81.622 185 32 2 111 293 38995323 38995139 1.720000e-32 152.0
38 TraesCS3D01G022400 chr7A 78.358 268 28 11 1428 1694 143853251 143853013 8.010000e-31 147.0
39 TraesCS3D01G022400 chr5A 81.347 193 27 8 111 298 666926634 666926822 2.230000e-31 148.0
40 TraesCS3D01G022400 chr4A 93.548 93 6 0 6338 6430 683431791 683431883 1.340000e-28 139.0
41 TraesCS3D01G022400 chr5D 91.753 97 8 0 6338 6434 481427106 481427202 1.730000e-27 135.0
42 TraesCS3D01G022400 chr6A 90.909 99 9 0 6336 6434 93892399 93892301 6.240000e-27 134.0
43 TraesCS3D01G022400 chr5B 79.861 144 18 9 1399 1541 17697117 17697250 2.940000e-15 95.3
44 TraesCS3D01G022400 chr2D 88.525 61 4 2 1289 1348 27954387 27954329 4.960000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G022400 chr3D 7218253 7228153 9900 False 18284.000 18284 100.00000 1 9901 1 chr3D.!!$F1 9900
1 TraesCS3D01G022400 chr3B 8802998 8813032 10034 False 2652.600 5784 90.86340 33 9901 5 chr3B.!!$F5 9868
2 TraesCS3D01G022400 chr3A 13035076 13045084 10008 True 1647.625 2974 91.35975 52 9901 8 chr3A.!!$R4 9849
3 TraesCS3D01G022400 chr4B 310203799 310204404 605 False 298.000 298 76.50600 1042 1694 1 chr4B.!!$F2 652
4 TraesCS3D01G022400 chr6B 576449317 576449921 604 False 205.000 254 83.13950 1042 1694 2 chr6B.!!$F2 652

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
209 229 0.297820 CCGAGCAAGCGAATTCGTAC 59.702 55.000 27.24 12.97 42.22 3.67 F
581 608 0.390860 GCCATCACCGCTATGAGAGT 59.609 55.000 0.00 0.00 30.46 3.24 F
1719 2162 0.036732 AGGAAGGCGTCAATGCTGAA 59.963 50.000 2.23 0.00 31.88 3.02 F
1720 2163 0.881118 GGAAGGCGTCAATGCTGAAA 59.119 50.000 2.23 0.00 31.88 2.69 F
2147 2612 0.960364 AACATTGACCGCTTCCGCAT 60.960 50.000 0.00 0.00 35.30 4.73 F
2148 2613 1.063006 CATTGACCGCTTCCGCATG 59.937 57.895 0.00 0.00 35.30 4.06 F
2362 2834 1.065199 TGCCAGCTCCATTAGTTCTGG 60.065 52.381 2.43 2.43 45.26 3.86 F
3724 4250 1.202639 ACATCTGAGGAACAACGTGCA 60.203 47.619 0.00 0.00 0.00 4.57 F
5134 5944 0.389025 AAGGGAAAACTGCAAAGGCG 59.611 50.000 0.00 0.00 45.35 5.52 F
5903 6904 0.178068 ACATCTATGTCGGTGGTGCC 59.822 55.000 0.00 0.00 35.87 5.01 F
6958 7976 2.354821 GGTTTCAGAATATGGTGCCGAC 59.645 50.000 0.00 0.00 0.00 4.79 F
8301 9371 1.292061 TTGGTTTCGTCTTGGACACG 58.708 50.000 0.00 0.00 38.67 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1595 2026 0.030369 CGTATCCTAGTGCACGACCC 59.970 60.000 12.01 0.0 36.53 4.46 R
2559 3044 0.621609 TGTATGGCAGGGGTACAACC 59.378 55.000 0.00 0.0 37.60 3.77 R
2935 3428 3.865745 CGAACGATGCAGTAAGAAAGGAT 59.134 43.478 0.00 0.0 0.00 3.24 R
3602 4128 4.462508 TCTGGATCTAGAAACTGCACTG 57.537 45.455 6.28 0.0 0.00 3.66 R
3697 4223 4.859798 CGTTGTTCCTCAGATGTTAGAGAC 59.140 45.833 0.00 0.0 33.74 3.36 R
3789 4315 4.876679 GTGTATTCCTCTACCTGCTTTTCC 59.123 45.833 0.00 0.0 0.00 3.13 R
4205 5013 1.928868 AAGCAACTCTGAAATGGGGG 58.071 50.000 0.00 0.0 0.00 5.40 R
5460 6275 0.665369 CCTGAAAAGGCAGCAAAGCG 60.665 55.000 0.00 0.0 34.56 4.68 R
5988 6989 0.322997 CCGTGGCCTTCAATGGGTTA 60.323 55.000 3.32 0.0 0.00 2.85 R
7516 8539 0.250295 GCCGCCTCCATACTGCAATA 60.250 55.000 0.00 0.0 0.00 1.90 R
8780 9860 0.741326 TGTCGTCTGAGGCTGCTATC 59.259 55.000 0.00 0.0 0.00 2.08 R
9786 10909 2.092592 TGCAATGCTGAGATCCTCACAT 60.093 45.455 6.82 0.0 35.39 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.449719 TTTATACTTTGAGAAGAATTGAGGGAC 57.550 33.333 0.00 0.00 36.69 4.46
27 28 5.574970 ACTTTGAGAAGAATTGAGGGACT 57.425 39.130 0.00 0.00 37.85 3.85
28 29 6.688073 ACTTTGAGAAGAATTGAGGGACTA 57.312 37.500 0.00 0.00 36.07 2.59
29 30 7.079451 ACTTTGAGAAGAATTGAGGGACTAA 57.921 36.000 0.00 0.00 36.07 2.24
30 31 7.518188 ACTTTGAGAAGAATTGAGGGACTAAA 58.482 34.615 0.00 0.00 36.07 1.85
31 32 7.998964 ACTTTGAGAAGAATTGAGGGACTAAAA 59.001 33.333 0.00 0.00 36.07 1.52
32 33 8.760980 TTTGAGAAGAATTGAGGGACTAAAAA 57.239 30.769 0.00 0.00 41.55 1.94
33 34 8.940397 TTGAGAAGAATTGAGGGACTAAAAAT 57.060 30.769 0.00 0.00 41.55 1.82
44 45 9.470399 TTGAGGGACTAAAAATATACTTTTCCC 57.530 33.333 6.76 6.76 41.55 3.97
45 46 8.842764 TGAGGGACTAAAAATATACTTTTCCCT 58.157 33.333 14.47 14.47 41.55 4.20
46 47 9.696572 GAGGGACTAAAAATATACTTTTCCCTT 57.303 33.333 15.33 4.94 41.55 3.95
47 48 9.696572 AGGGACTAAAAATATACTTTTCCCTTC 57.303 33.333 10.38 0.00 37.08 3.46
48 49 9.470399 GGGACTAAAAATATACTTTTCCCTTCA 57.530 33.333 7.40 0.00 31.58 3.02
147 167 6.549364 AGTTGTCATCCAAACAAGATTTGGTA 59.451 34.615 16.03 5.88 46.75 3.25
158 178 7.595819 AACAAGATTTGGTATTGAAACCTCA 57.404 32.000 0.00 0.00 40.44 3.86
159 179 7.219484 ACAAGATTTGGTATTGAAACCTCAG 57.781 36.000 0.00 0.00 40.44 3.35
192 212 2.616376 TGGTCAATTCAGTGAACAACCG 59.384 45.455 20.09 5.87 42.24 4.44
209 229 0.297820 CCGAGCAAGCGAATTCGTAC 59.702 55.000 27.24 12.97 42.22 3.67
245 265 7.488322 TCAGTTTTCTCACCGAATTGAAATTT 58.512 30.769 0.00 0.00 0.00 1.82
246 266 7.647715 TCAGTTTTCTCACCGAATTGAAATTTC 59.352 33.333 11.41 11.41 0.00 2.17
304 324 4.600692 ACAAACAAAGCATTAGGGGAAC 57.399 40.909 0.00 0.00 0.00 3.62
328 348 6.502863 ACCAGAACCTAACATACCCTTAGAAA 59.497 38.462 0.00 0.00 0.00 2.52
339 359 3.304829 ACCCTTAGAAAGCCAAGCAAAA 58.695 40.909 0.00 0.00 0.00 2.44
340 360 3.903714 ACCCTTAGAAAGCCAAGCAAAAT 59.096 39.130 0.00 0.00 0.00 1.82
375 396 7.513371 ACTTAATTCCGGTTTCATTGTTGTA 57.487 32.000 0.00 0.00 0.00 2.41
411 438 2.205243 CTGCCGGAAAAGCAAGCCTC 62.205 60.000 5.05 0.00 40.35 4.70
419 446 1.856265 AAAGCAAGCCTCCGCGAAAG 61.856 55.000 8.23 4.29 41.18 2.62
478 505 3.698040 TCCTTGATACCTCGACTACCAAC 59.302 47.826 0.00 0.00 0.00 3.77
551 578 1.062587 CCATCGTCGCCTCAAATGTTC 59.937 52.381 0.00 0.00 0.00 3.18
552 579 2.002586 CATCGTCGCCTCAAATGTTCT 58.997 47.619 0.00 0.00 0.00 3.01
574 601 3.845259 GGTCCGCCATCACCGCTA 61.845 66.667 0.00 0.00 34.09 4.26
581 608 0.390860 GCCATCACCGCTATGAGAGT 59.609 55.000 0.00 0.00 30.46 3.24
612 639 1.276421 CTCGTCACAACCCTCCATCTT 59.724 52.381 0.00 0.00 0.00 2.40
625 652 1.699083 TCCATCTTGGAGTCTTGTGCA 59.301 47.619 0.00 0.00 42.67 4.57
627 654 2.289882 CCATCTTGGAGTCTTGTGCAGA 60.290 50.000 0.00 0.00 40.96 4.26
628 655 3.405831 CATCTTGGAGTCTTGTGCAGAA 58.594 45.455 0.00 0.00 31.28 3.02
668 695 2.668550 GTCCTCCGTGGTTGTGCC 60.669 66.667 0.00 0.00 37.07 5.01
676 703 3.893763 TGGTTGTGCCGGCGTTTG 61.894 61.111 23.90 0.00 41.21 2.93
680 707 2.539338 TTGTGCCGGCGTTTGTCTC 61.539 57.895 23.90 4.96 0.00 3.36
690 717 2.352960 GGCGTTTGTCTCATGAGAATCC 59.647 50.000 26.70 15.09 39.48 3.01
699 726 1.757118 TCATGAGAATCCGGTGAGACC 59.243 52.381 0.00 0.00 34.05 3.85
716 743 8.499162 CGGTGAGACCTCAAATCAAAATATATC 58.501 37.037 0.70 0.00 41.85 1.63
832 1173 7.422878 TTTTGACCAAGGTTACAAAAACAAC 57.577 32.000 13.36 0.00 38.61 3.32
909 1254 6.503616 TCATTTTGTATTTGTTTGTGCGAC 57.496 33.333 0.00 0.00 0.00 5.19
915 1260 8.635877 TTTGTATTTGTTTGTGCGACTATTTT 57.364 26.923 0.00 0.00 0.00 1.82
917 1262 9.900710 TTGTATTTGTTTGTGCGACTATTTTAT 57.099 25.926 0.00 0.00 0.00 1.40
1002 1399 1.607509 CGCTGCTCTCCCCTTCATATG 60.608 57.143 0.00 0.00 0.00 1.78
1018 1415 1.613317 TATGTCTCCACACCCCGCTG 61.613 60.000 0.00 0.00 34.48 5.18
1033 1430 4.351054 CTGCCACTCCCACACCCC 62.351 72.222 0.00 0.00 0.00 4.95
1389 1816 4.481930 TCGCAATCAAATTGTCGAGTTT 57.518 36.364 12.04 0.00 40.79 2.66
1392 1819 4.553429 CGCAATCAAATTGTCGAGTTTACC 59.447 41.667 9.38 0.00 42.20 2.85
1397 1824 6.480524 TCAAATTGTCGAGTTTACCATGAG 57.519 37.500 0.00 0.00 0.00 2.90
1399 1826 5.862924 AATTGTCGAGTTTACCATGAGTG 57.137 39.130 0.00 0.00 0.00 3.51
1400 1827 4.594123 TTGTCGAGTTTACCATGAGTGA 57.406 40.909 0.00 0.00 0.00 3.41
1401 1828 4.594123 TGTCGAGTTTACCATGAGTGAA 57.406 40.909 0.00 0.00 0.00 3.18
1402 1829 5.147330 TGTCGAGTTTACCATGAGTGAAT 57.853 39.130 0.00 0.00 0.00 2.57
1403 1830 6.275494 TGTCGAGTTTACCATGAGTGAATA 57.725 37.500 0.00 0.00 0.00 1.75
1404 1831 6.873997 TGTCGAGTTTACCATGAGTGAATAT 58.126 36.000 0.00 0.00 0.00 1.28
1405 1832 6.756542 TGTCGAGTTTACCATGAGTGAATATG 59.243 38.462 0.00 0.00 0.00 1.78
1406 1833 6.757010 GTCGAGTTTACCATGAGTGAATATGT 59.243 38.462 0.00 0.00 0.00 2.29
1407 1834 6.756542 TCGAGTTTACCATGAGTGAATATGTG 59.243 38.462 0.00 0.00 0.00 3.21
1408 1835 6.018751 CGAGTTTACCATGAGTGAATATGTGG 60.019 42.308 0.00 0.00 0.00 4.17
1409 1836 5.590259 AGTTTACCATGAGTGAATATGTGGC 59.410 40.000 0.00 0.00 0.00 5.01
1450 1877 7.410800 AATTTGTGCTTGAATTGTGTATGTG 57.589 32.000 0.00 0.00 0.00 3.21
1451 1878 5.512753 TTGTGCTTGAATTGTGTATGTGT 57.487 34.783 0.00 0.00 0.00 3.72
1488 1918 2.033424 GCAGTTTCAGTTTCTCCACCAC 59.967 50.000 0.00 0.00 0.00 4.16
1490 1920 3.313526 CAGTTTCAGTTTCTCCACCACTG 59.686 47.826 0.00 0.00 39.51 3.66
1493 1923 1.202687 TCAGTTTCTCCACCACTGCAG 60.203 52.381 13.48 13.48 38.27 4.41
1494 1924 0.536006 AGTTTCTCCACCACTGCAGC 60.536 55.000 15.27 0.00 0.00 5.25
1561 1992 1.538047 ACTGTACTGGCCTTGCAATG 58.462 50.000 3.32 0.00 0.00 2.82
1595 2026 0.963962 AATTGGGCTGTGCTTGTCTG 59.036 50.000 0.00 0.00 0.00 3.51
1627 2059 4.822896 ACTAGGATACGAGGCTCTAGTTTG 59.177 45.833 13.50 0.00 44.65 2.93
1694 2133 4.637483 GCAACTGCATAGAGCCAAATAA 57.363 40.909 0.00 0.00 44.83 1.40
1697 2136 6.145535 GCAACTGCATAGAGCCAAATAATAC 58.854 40.000 0.00 0.00 44.83 1.89
1716 2159 2.042831 GCAGGAAGGCGTCAATGCT 61.043 57.895 17.92 0.00 37.46 3.79
1717 2160 1.798735 CAGGAAGGCGTCAATGCTG 59.201 57.895 2.23 0.37 34.52 4.41
1718 2161 0.674581 CAGGAAGGCGTCAATGCTGA 60.675 55.000 8.33 0.00 34.83 4.26
1719 2162 0.036732 AGGAAGGCGTCAATGCTGAA 59.963 50.000 2.23 0.00 31.88 3.02
1720 2163 0.881118 GGAAGGCGTCAATGCTGAAA 59.119 50.000 2.23 0.00 31.88 2.69
1751 2194 3.644966 TCTTCCCGGATGCATAAACTT 57.355 42.857 0.73 0.00 0.00 2.66
1761 2204 5.504665 CGGATGCATAAACTTGTCCTGAATC 60.505 44.000 0.00 0.00 0.00 2.52
1811 2264 7.716768 TGTTGTTCGTAGTTCACATGATTTA 57.283 32.000 0.00 0.00 0.00 1.40
1812 2265 8.317891 TGTTGTTCGTAGTTCACATGATTTAT 57.682 30.769 0.00 0.00 0.00 1.40
1813 2266 8.779303 TGTTGTTCGTAGTTCACATGATTTATT 58.221 29.630 0.00 0.00 0.00 1.40
1983 2436 8.092521 CAGTATGCTATCCAGGTCATTTAAAG 57.907 38.462 0.00 0.00 0.00 1.85
2066 2527 1.268743 GGTGTCTTGCTGTGTTTCTGC 60.269 52.381 0.00 0.00 40.62 4.26
2074 2539 2.030628 TGCTGTGTTTCTGCATGATGTG 60.031 45.455 0.00 0.00 43.97 3.21
2147 2612 0.960364 AACATTGACCGCTTCCGCAT 60.960 50.000 0.00 0.00 35.30 4.73
2148 2613 1.063006 CATTGACCGCTTCCGCATG 59.937 57.895 0.00 0.00 35.30 4.06
2280 2745 2.224079 GTGCTCTCACGCTTCATTTTCA 59.776 45.455 0.00 0.00 32.98 2.69
2296 2761 6.128486 TCATTTTCAGGCTGCCAATTAGATA 58.872 36.000 22.65 3.16 0.00 1.98
2345 2817 4.202050 ACACAAAACAGATCACTTCTTGCC 60.202 41.667 0.00 0.00 29.93 4.52
2346 2818 3.953612 ACAAAACAGATCACTTCTTGCCA 59.046 39.130 0.00 0.00 29.93 4.92
2362 2834 1.065199 TGCCAGCTCCATTAGTTCTGG 60.065 52.381 2.43 2.43 45.26 3.86
2392 2864 2.810650 AGCTTCGGTAATTGAGCTACG 58.189 47.619 0.00 0.00 0.00 3.51
2399 2871 2.351726 GGTAATTGAGCTACGTTGCCAG 59.648 50.000 18.33 0.00 0.00 4.85
2541 3026 3.565482 GGTGCTTGTTTTGACTGATCAGA 59.435 43.478 29.27 4.71 35.83 3.27
2559 3044 2.355756 CAGAGCGAAACCATGGGTATTG 59.644 50.000 18.09 3.93 33.12 1.90
2601 3086 3.118629 TGTTCCATGACTCATAGCCTGAC 60.119 47.826 0.00 0.00 0.00 3.51
2685 3178 8.922058 TGTACTCCTTTATTTCACGAACTATC 57.078 34.615 0.00 0.00 0.00 2.08
2760 3253 9.813080 GAAAATGTTCTGTGTAGTACTTTGATC 57.187 33.333 0.00 0.00 0.00 2.92
2784 3277 5.129485 CACTACTGGTTCATTAGGAGGATGT 59.871 44.000 0.00 0.00 0.00 3.06
2935 3428 5.682659 CTTACCAGGTCAGAGCTACTAGTA 58.317 45.833 0.65 1.89 0.00 1.82
3245 3740 7.557724 AGAAAGGTAAGTTGTAGAGCTTATCC 58.442 38.462 3.53 5.46 30.74 2.59
3645 4171 5.954150 AGATGGACAATATTGAACTGCCTTT 59.046 36.000 22.16 6.98 0.00 3.11
3697 4223 1.411394 CTGAGCATGTTTTGTTGCCG 58.589 50.000 0.00 0.00 39.72 5.69
3724 4250 1.202639 ACATCTGAGGAACAACGTGCA 60.203 47.619 0.00 0.00 0.00 4.57
3855 4381 5.983540 AGTGAACTTGAGAGAACTGAACTT 58.016 37.500 0.00 0.00 0.00 2.66
4150 4958 3.492313 CGACATTTGCTAAAGTTCAGCC 58.508 45.455 0.00 0.00 38.29 4.85
4160 4968 2.901051 AAGTTCAGCCGCCGTATCCG 62.901 60.000 0.00 0.00 0.00 4.18
4201 5009 8.686334 GTTTCCATATTGTTGTCATTATCCACT 58.314 33.333 0.00 0.00 0.00 4.00
4205 5013 9.520204 CCATATTGTTGTCATTATCCACTTTTC 57.480 33.333 0.00 0.00 0.00 2.29
4254 5062 1.562475 ACACGTAAAGGGGCATGGTAT 59.438 47.619 0.00 0.00 0.00 2.73
4505 5314 1.338011 CCACCCAATGGCAATTGTGAC 60.338 52.381 12.85 0.00 43.24 3.67
4614 5423 6.712547 ACAAGATGCTGCTTTAGAAGTTACTT 59.287 34.615 0.00 0.00 0.00 2.24
4697 5506 1.531149 GTAGCAATGTTCTGCACACGT 59.469 47.619 0.00 0.00 45.18 4.49
4774 5583 4.436584 CGAGATTGGCTTTTTGCTAGACAG 60.437 45.833 0.00 0.00 42.39 3.51
4801 5610 1.971695 GGGCGAACCTTTCCCTGTG 60.972 63.158 0.00 0.00 37.08 3.66
4819 5628 5.765182 CCCTGTGATTTACCTTGATGATACC 59.235 44.000 0.00 0.00 0.00 2.73
4888 5697 3.944015 CTGAATTGGATGACTTCACTCCC 59.056 47.826 0.00 0.00 0.00 4.30
4957 5767 5.477510 TGTGTTTCAACAATTTCTTGTGCT 58.522 33.333 0.00 0.00 44.83 4.40
4965 5775 5.429957 ACAATTTCTTGTGCTGAGAGTTC 57.570 39.130 0.00 0.00 43.92 3.01
5000 5810 4.876679 GTGTAATGCTAAGAACTTCCCCTC 59.123 45.833 0.00 0.00 0.00 4.30
5002 5812 1.286248 TGCTAAGAACTTCCCCTCCC 58.714 55.000 0.00 0.00 0.00 4.30
5003 5813 0.547075 GCTAAGAACTTCCCCTCCCC 59.453 60.000 0.00 0.00 0.00 4.81
5004 5814 1.214217 CTAAGAACTTCCCCTCCCCC 58.786 60.000 0.00 0.00 0.00 5.40
5034 5844 7.790027 AGATATTCTCTAGTTGTTGCATGTCT 58.210 34.615 0.00 0.00 30.26 3.41
5049 5859 9.571816 TGTTGCATGTCTATAAATCATATTGGA 57.428 29.630 0.00 0.00 0.00 3.53
5068 5878 5.656213 TGGAACAAAGGTTTTCGGTTTAA 57.344 34.783 0.00 0.00 37.36 1.52
5069 5879 6.034161 TGGAACAAAGGTTTTCGGTTTAAA 57.966 33.333 0.00 0.00 37.36 1.52
5070 5880 6.461640 TGGAACAAAGGTTTTCGGTTTAAAA 58.538 32.000 0.00 0.00 37.36 1.52
5071 5881 6.932960 TGGAACAAAGGTTTTCGGTTTAAAAA 59.067 30.769 0.00 0.00 37.36 1.94
5129 5939 2.834549 TGGAACAAAGGGAAAACTGCAA 59.165 40.909 0.00 0.00 31.92 4.08
5134 5944 0.389025 AAGGGAAAACTGCAAAGGCG 59.611 50.000 0.00 0.00 45.35 5.52
5158 5968 7.873505 GCGAAAGAGTTAATCCCACTTCTATAT 59.126 37.037 0.00 0.00 0.00 0.86
5168 5978 7.573968 ATCCCACTTCTATATTTTGTGAAGC 57.426 36.000 0.00 0.00 39.39 3.86
5186 5996 9.461312 TTGTGAAGCTAAAATCATACATTAGGT 57.539 29.630 0.00 0.00 38.58 3.08
5223 6033 5.745514 CAAAGATGACACAGAGAAACACAG 58.254 41.667 0.00 0.00 0.00 3.66
5226 6036 5.053145 AGATGACACAGAGAAACACAGTTC 58.947 41.667 0.00 0.00 0.00 3.01
5227 6037 4.471904 TGACACAGAGAAACACAGTTCT 57.528 40.909 0.00 0.00 40.62 3.01
5256 6066 4.901197 TGCATGTCACCTCCTTTAGTTA 57.099 40.909 0.00 0.00 0.00 2.24
5259 6069 5.189736 TGCATGTCACCTCCTTTAGTTAGAT 59.810 40.000 0.00 0.00 0.00 1.98
5316 6131 7.094377 GCAAACTGGAAAGAACTGGATAATGTA 60.094 37.037 0.00 0.00 0.00 2.29
5376 6191 3.539604 CAACTTGAGGGTCATGAGATCC 58.460 50.000 0.00 0.00 46.04 3.36
5390 6205 6.989169 GTCATGAGATCCAATGTAAGCTACTT 59.011 38.462 0.00 0.00 0.00 2.24
5391 6206 8.144478 GTCATGAGATCCAATGTAAGCTACTTA 58.856 37.037 0.00 0.00 0.00 2.24
5443 6258 7.593273 TGTATTGAGTTTCATTTAGTTTTGCCG 59.407 33.333 0.00 0.00 0.00 5.69
5447 6262 7.302524 TGAGTTTCATTTAGTTTTGCCGATAC 58.697 34.615 0.00 0.00 0.00 2.24
5460 6275 8.557029 AGTTTTGCCGATACATAGTATTTAAGC 58.443 33.333 0.00 0.00 0.00 3.09
5462 6277 4.624024 TGCCGATACATAGTATTTAAGCGC 59.376 41.667 0.00 0.00 0.00 5.92
5568 6383 4.173256 CCGGTTCATGCTGGTAAATTTTC 58.827 43.478 0.00 0.00 0.00 2.29
5569 6384 4.082245 CCGGTTCATGCTGGTAAATTTTCT 60.082 41.667 0.00 0.00 0.00 2.52
5572 6387 6.625740 CGGTTCATGCTGGTAAATTTTCTGAT 60.626 38.462 0.00 0.00 0.00 2.90
5738 6739 8.641541 CCTATTTTGAAATGGTTATGCAGGTAT 58.358 33.333 0.00 0.00 0.00 2.73
5903 6904 0.178068 ACATCTATGTCGGTGGTGCC 59.822 55.000 0.00 0.00 35.87 5.01
5950 6951 5.421693 TGTATGCAAGATTTTGGCATAAGGT 59.578 36.000 7.09 0.00 36.26 3.50
5988 6989 7.475299 TCAATACAAAAACCTCCCCTTCTATT 58.525 34.615 0.00 0.00 0.00 1.73
5993 6994 4.875578 AAACCTCCCCTTCTATTAACCC 57.124 45.455 0.00 0.00 0.00 4.11
6003 7004 4.584743 CCTTCTATTAACCCATTGAAGGCC 59.415 45.833 9.87 0.00 44.17 5.19
6005 7006 4.532834 TCTATTAACCCATTGAAGGCCAC 58.467 43.478 5.01 0.00 0.00 5.01
6066 7067 9.740239 CTATGGGAAACATATCTGAATTTGTTG 57.260 33.333 4.65 0.00 41.07 3.33
6069 7070 9.473007 TGGGAAACATATCTGAATTTGTTGATA 57.527 29.630 4.65 0.00 37.20 2.15
6088 7097 7.826744 TGTTGATACCATTGTTATCAGCTTGTA 59.173 33.333 15.51 0.00 34.14 2.41
6099 7108 2.888594 TCAGCTTGTAACCTGCGTATC 58.111 47.619 0.00 0.00 0.00 2.24
6113 7122 4.376413 CCTGCGTATCGTATGAGATTTTGC 60.376 45.833 0.00 0.00 32.39 3.68
6120 7129 5.734855 TCGTATGAGATTTTGCTAAAGGC 57.265 39.130 0.00 0.00 42.22 4.35
6173 7182 5.752036 AACAATCTGAGAGGTCTGAATCA 57.248 39.130 0.00 0.00 34.62 2.57
6175 7184 4.121317 CAATCTGAGAGGTCTGAATCAGC 58.879 47.826 5.18 0.79 39.21 4.26
6200 7209 7.542890 CATGTGCCCAACTAACATAATAACAA 58.457 34.615 0.00 0.00 33.31 2.83
6228 7237 5.471456 ACAGTGGAATTTCAGCTCTTGTTAG 59.529 40.000 0.00 0.00 0.00 2.34
6285 7302 5.539048 TGCTTACTCTTTCTGGTTCACTAC 58.461 41.667 0.00 0.00 0.00 2.73
6309 7326 5.066505 CGCTTTTTCTCCCTGCTTGTATATT 59.933 40.000 0.00 0.00 0.00 1.28
6311 7328 7.041098 CGCTTTTTCTCCCTGCTTGTATATTAT 60.041 37.037 0.00 0.00 0.00 1.28
6312 7329 9.284968 GCTTTTTCTCCCTGCTTGTATATTATA 57.715 33.333 0.00 0.00 0.00 0.98
6339 7356 6.096564 AGGCCTGTAGTACACAAATCTAGTAC 59.903 42.308 3.11 0.00 36.48 2.73
6341 7358 7.194962 GCCTGTAGTACACAAATCTAGTACTC 58.805 42.308 0.00 2.42 43.50 2.59
6342 7359 7.681543 GCCTGTAGTACACAAATCTAGTACTCC 60.682 44.444 0.00 0.00 43.50 3.85
6343 7360 7.201803 CCTGTAGTACACAAATCTAGTACTCCC 60.202 44.444 0.00 2.34 43.50 4.30
6344 7361 7.408543 TGTAGTACACAAATCTAGTACTCCCT 58.591 38.462 0.00 0.00 43.50 4.20
6345 7362 7.555554 TGTAGTACACAAATCTAGTACTCCCTC 59.444 40.741 0.00 0.65 43.50 4.30
6346 7363 5.892686 AGTACACAAATCTAGTACTCCCTCC 59.107 44.000 0.00 0.00 43.50 4.30
6347 7364 3.700038 ACACAAATCTAGTACTCCCTCCG 59.300 47.826 0.00 0.00 0.00 4.63
6348 7365 3.952323 CACAAATCTAGTACTCCCTCCGA 59.048 47.826 0.00 0.00 0.00 4.55
6349 7366 4.585162 CACAAATCTAGTACTCCCTCCGAT 59.415 45.833 0.00 0.00 0.00 4.18
6350 7367 4.828387 ACAAATCTAGTACTCCCTCCGATC 59.172 45.833 0.00 0.00 0.00 3.69
6351 7368 3.724732 ATCTAGTACTCCCTCCGATCC 57.275 52.381 0.00 0.00 0.00 3.36
6352 7369 2.415624 TCTAGTACTCCCTCCGATCCA 58.584 52.381 0.00 0.00 0.00 3.41
6353 7370 2.987437 TCTAGTACTCCCTCCGATCCAT 59.013 50.000 0.00 0.00 0.00 3.41
6354 7371 4.173594 TCTAGTACTCCCTCCGATCCATA 58.826 47.826 0.00 0.00 0.00 2.74
6355 7372 3.897657 AGTACTCCCTCCGATCCATAA 57.102 47.619 0.00 0.00 0.00 1.90
6356 7373 4.405756 AGTACTCCCTCCGATCCATAAT 57.594 45.455 0.00 0.00 0.00 1.28
6357 7374 5.531753 AGTACTCCCTCCGATCCATAATA 57.468 43.478 0.00 0.00 0.00 0.98
6358 7375 5.900437 AGTACTCCCTCCGATCCATAATAA 58.100 41.667 0.00 0.00 0.00 1.40
6359 7376 5.952947 AGTACTCCCTCCGATCCATAATAAG 59.047 44.000 0.00 0.00 0.00 1.73
6360 7377 4.753186 ACTCCCTCCGATCCATAATAAGT 58.247 43.478 0.00 0.00 0.00 2.24
6361 7378 4.528596 ACTCCCTCCGATCCATAATAAGTG 59.471 45.833 0.00 0.00 0.00 3.16
6362 7379 4.489737 TCCCTCCGATCCATAATAAGTGT 58.510 43.478 0.00 0.00 0.00 3.55
6363 7380 4.527038 TCCCTCCGATCCATAATAAGTGTC 59.473 45.833 0.00 0.00 0.00 3.67
6364 7381 4.486090 CCTCCGATCCATAATAAGTGTCG 58.514 47.826 0.00 0.00 0.00 4.35
6365 7382 4.022242 CCTCCGATCCATAATAAGTGTCGT 60.022 45.833 0.00 0.00 0.00 4.34
6366 7383 5.182570 CCTCCGATCCATAATAAGTGTCGTA 59.817 44.000 0.00 0.00 0.00 3.43
6367 7384 6.250344 TCCGATCCATAATAAGTGTCGTAG 57.750 41.667 0.00 0.00 0.00 3.51
6368 7385 5.766670 TCCGATCCATAATAAGTGTCGTAGT 59.233 40.000 0.00 0.00 0.00 2.73
6369 7386 6.263842 TCCGATCCATAATAAGTGTCGTAGTT 59.736 38.462 0.00 0.00 0.00 2.24
6370 7387 6.921857 CCGATCCATAATAAGTGTCGTAGTTT 59.078 38.462 0.00 0.00 0.00 2.66
6371 7388 7.437267 CCGATCCATAATAAGTGTCGTAGTTTT 59.563 37.037 0.00 0.00 0.00 2.43
6372 7389 8.266682 CGATCCATAATAAGTGTCGTAGTTTTG 58.733 37.037 0.00 0.00 0.00 2.44
6373 7390 9.309516 GATCCATAATAAGTGTCGTAGTTTTGA 57.690 33.333 0.00 0.00 0.00 2.69
6374 7391 9.661563 ATCCATAATAAGTGTCGTAGTTTTGAA 57.338 29.630 0.00 0.00 0.00 2.69
6375 7392 8.928733 TCCATAATAAGTGTCGTAGTTTTGAAC 58.071 33.333 0.00 0.00 0.00 3.18
6376 7393 8.932791 CCATAATAAGTGTCGTAGTTTTGAACT 58.067 33.333 0.00 0.00 45.40 3.01
6380 7397 6.839820 AAGTGTCGTAGTTTTGAACTAAGG 57.160 37.500 11.82 4.66 44.95 2.69
6381 7398 5.910614 AGTGTCGTAGTTTTGAACTAAGGT 58.089 37.500 11.82 0.00 44.95 3.50
6382 7399 6.343703 AGTGTCGTAGTTTTGAACTAAGGTT 58.656 36.000 11.82 0.00 44.95 3.50
6383 7400 6.257193 AGTGTCGTAGTTTTGAACTAAGGTTG 59.743 38.462 11.82 0.00 44.95 3.77
6384 7401 6.256321 GTGTCGTAGTTTTGAACTAAGGTTGA 59.744 38.462 11.82 1.30 44.95 3.18
6385 7402 6.817641 TGTCGTAGTTTTGAACTAAGGTTGAA 59.182 34.615 11.82 0.00 44.95 2.69
6386 7403 7.121911 GTCGTAGTTTTGAACTAAGGTTGAAC 58.878 38.462 11.82 0.00 44.95 3.18
6387 7404 7.010830 GTCGTAGTTTTGAACTAAGGTTGAACT 59.989 37.037 11.82 0.00 44.95 3.01
6388 7405 8.196771 TCGTAGTTTTGAACTAAGGTTGAACTA 58.803 33.333 11.82 0.00 44.95 2.24
6389 7406 8.819974 CGTAGTTTTGAACTAAGGTTGAACTAA 58.180 33.333 2.37 0.00 44.95 2.24
6390 7407 9.926751 GTAGTTTTGAACTAAGGTTGAACTAAC 57.073 33.333 2.37 0.00 44.95 2.34
6391 7408 8.803397 AGTTTTGAACTAAGGTTGAACTAACT 57.197 30.769 0.00 0.00 40.69 2.24
6392 7409 9.239551 AGTTTTGAACTAAGGTTGAACTAACTT 57.760 29.630 0.00 0.00 40.69 2.66
6393 7410 9.850628 GTTTTGAACTAAGGTTGAACTAACTTT 57.149 29.630 0.00 0.00 41.00 2.66
6410 7427 7.992008 ACTAACTTTAGTTTAAAGCTGCAACA 58.008 30.769 1.02 0.00 46.97 3.33
6411 7428 8.463607 ACTAACTTTAGTTTAAAGCTGCAACAA 58.536 29.630 1.02 0.00 46.97 2.83
6412 7429 9.463443 CTAACTTTAGTTTAAAGCTGCAACAAT 57.537 29.630 1.02 0.00 46.97 2.71
6413 7430 8.716646 AACTTTAGTTTAAAGCTGCAACAATT 57.283 26.923 1.02 0.00 46.97 2.32
6414 7431 9.810545 AACTTTAGTTTAAAGCTGCAACAATTA 57.189 25.926 1.02 0.00 46.97 1.40
6415 7432 9.981114 ACTTTAGTTTAAAGCTGCAACAATTAT 57.019 25.926 1.02 0.00 46.97 1.28
6420 7437 8.558700 AGTTTAAAGCTGCAACAATTATTTTGG 58.441 29.630 1.02 0.00 0.00 3.28
6421 7438 8.555361 GTTTAAAGCTGCAACAATTATTTTGGA 58.445 29.630 1.02 0.00 0.00 3.53
6422 7439 8.845413 TTAAAGCTGCAACAATTATTTTGGAT 57.155 26.923 1.02 0.00 0.00 3.41
6423 7440 6.973229 AAGCTGCAACAATTATTTTGGATC 57.027 33.333 1.02 0.00 0.00 3.36
6424 7441 5.104374 AGCTGCAACAATTATTTTGGATCG 58.896 37.500 1.02 0.00 0.00 3.69
6425 7442 4.268405 GCTGCAACAATTATTTTGGATCGG 59.732 41.667 0.00 0.00 0.00 4.18
6426 7443 5.649557 CTGCAACAATTATTTTGGATCGGA 58.350 37.500 0.00 0.00 0.00 4.55
6427 7444 5.649557 TGCAACAATTATTTTGGATCGGAG 58.350 37.500 0.00 0.00 0.00 4.63
6428 7445 5.043248 GCAACAATTATTTTGGATCGGAGG 58.957 41.667 0.00 0.00 0.00 4.30
6429 7446 5.591099 CAACAATTATTTTGGATCGGAGGG 58.409 41.667 0.00 0.00 0.00 4.30
6430 7447 4.215109 ACAATTATTTTGGATCGGAGGGG 58.785 43.478 0.00 0.00 0.00 4.79
6460 7477 5.358922 TCTTTTGGCCTCATGTTTCTTTTG 58.641 37.500 3.32 0.00 0.00 2.44
6799 7817 6.173339 GGTGATAGAAGTTTGGAGATTGACA 58.827 40.000 0.00 0.00 0.00 3.58
6841 7859 7.730364 TCTTAAGATCACAAAAGTTGGAGAC 57.270 36.000 0.00 0.00 34.12 3.36
6842 7860 7.279615 TCTTAAGATCACAAAAGTTGGAGACA 58.720 34.615 0.00 0.00 39.83 3.41
6958 7976 2.354821 GGTTTCAGAATATGGTGCCGAC 59.645 50.000 0.00 0.00 0.00 4.79
7063 8083 7.542025 ACAGATGAAATAGAACCATTTTCAGC 58.458 34.615 5.09 5.09 42.86 4.26
7211 8231 9.116080 TGGATCATATAAAGATGGAACTATGGT 57.884 33.333 0.00 0.00 0.00 3.55
7263 8283 2.981805 CCGTGTTCTTCACAAATGCATG 59.018 45.455 0.00 0.00 46.44 4.06
7291 8311 3.431766 GGTAGGTCACACAGTCACAGTTT 60.432 47.826 0.00 0.00 0.00 2.66
7357 8377 5.543507 ATGGAAACCATGCAACTTGTTTA 57.456 34.783 2.28 0.00 43.39 2.01
7434 8457 8.379457 ACAAGTAAAAGATAACAGAGGTGTTC 57.621 34.615 0.00 0.00 43.88 3.18
7484 8507 4.985538 ACTCATTCCACAAACCATACTGT 58.014 39.130 0.00 0.00 0.00 3.55
7542 8565 2.137528 TATGGAGGCGGCCGAATGA 61.138 57.895 33.48 8.20 0.00 2.57
7546 8569 4.514577 AGGCGGCCGAATGAGACG 62.515 66.667 33.48 0.00 0.00 4.18
7582 8605 8.538409 ACCTTAATTGCACATTGATCTTTTTC 57.462 30.769 0.00 0.00 0.00 2.29
7625 8648 4.207891 TGATTACTTCTTCACTCCTGGC 57.792 45.455 0.00 0.00 0.00 4.85
7824 8847 2.158475 AGTCCCAAAGATGGCAGAACAA 60.158 45.455 0.00 0.00 46.09 2.83
7970 9035 7.022979 CAGTATTTCTTCGTTCATGCATTCAA 58.977 34.615 0.00 0.00 0.00 2.69
7980 9045 5.961843 CGTTCATGCATTCAAGTCATACTTC 59.038 40.000 0.00 0.00 36.03 3.01
7982 9047 5.418676 TCATGCATTCAAGTCATACTTCGA 58.581 37.500 0.00 0.00 36.03 3.71
8020 9085 4.489810 CACAGAATCTCTCGTAAAGCTGT 58.510 43.478 0.00 0.00 35.92 4.40
8147 9217 9.556030 GTAAACATGTTTTTAGCTTATCTGGTC 57.444 33.333 27.66 0.00 34.23 4.02
8148 9218 7.759489 AACATGTTTTTAGCTTATCTGGTCA 57.241 32.000 4.92 0.00 0.00 4.02
8164 9234 7.572523 ATCTGGTCATACAACCACATAATTG 57.427 36.000 0.00 0.00 44.40 2.32
8250 9320 5.234466 AGACTCCTTTGTTCTGTTGCTAT 57.766 39.130 0.00 0.00 0.00 2.97
8301 9371 1.292061 TTGGTTTCGTCTTGGACACG 58.708 50.000 0.00 0.00 38.67 4.49
8355 9425 5.618236 AGGTAAACTCAAACCTGTTCTACC 58.382 41.667 0.00 0.00 44.53 3.18
8582 9662 6.322969 TCTTTTGGATCGCTAGTCTGGTATAA 59.677 38.462 0.00 0.00 0.00 0.98
8613 9693 6.040729 TGGATTGAAATTTCACATGTCAGTGT 59.959 34.615 20.35 0.00 40.37 3.55
8619 9699 9.114952 TGAAATTTCACATGTCAGTGTACTTTA 57.885 29.630 16.91 0.00 40.37 1.85
8708 9788 2.172293 GGAATCAGAGATTGTGCTCCCT 59.828 50.000 0.00 0.00 35.49 4.20
8780 9860 1.482182 TCCGAGGATGATGTGTTCCAG 59.518 52.381 0.00 0.00 34.27 3.86
8798 9878 1.028905 AGATAGCAGCCTCAGACGAC 58.971 55.000 0.00 0.00 0.00 4.34
8849 9929 6.101734 AGGCCATCAGGAAGAGAATTTATGTA 59.898 38.462 5.01 0.00 36.89 2.29
8912 9992 4.183865 CAAGGACGTGATTATTGCTCTGA 58.816 43.478 0.00 0.00 0.00 3.27
8979 10062 3.554324 GTCTAGAGACTACTGAGACGCAG 59.446 52.174 4.47 4.47 44.54 5.18
9064 10155 8.714179 TGTGATACTCCTACGTTTAACAATTTG 58.286 33.333 0.00 0.00 0.00 2.32
9092 10183 7.563888 TTATGATGGCTTCTCTCTTTGAATG 57.436 36.000 1.86 0.00 0.00 2.67
9138 10229 6.808212 CAGAAGCTTTTTGAAGAAGTGAAACA 59.192 34.615 0.00 0.00 41.43 2.83
9186 10286 5.470047 AAGTACCACTGAACCTAACTCAG 57.530 43.478 0.00 0.00 44.90 3.35
9217 10317 7.065803 TCGCCTGATTATTTTCCAAGTTTCTAG 59.934 37.037 0.00 0.00 0.00 2.43
9405 10505 1.573108 CTGGGGTATCAGTGTCCACT 58.427 55.000 0.00 0.00 43.61 4.00
9407 10507 3.104512 CTGGGGTATCAGTGTCCACTAA 58.895 50.000 0.00 0.00 40.20 2.24
9436 10544 3.338249 TGGACTGATGCAACTAAGCTTC 58.662 45.455 0.00 0.00 38.68 3.86
9437 10545 3.244526 TGGACTGATGCAACTAAGCTTCA 60.245 43.478 0.00 0.00 43.64 3.02
9438 10546 3.753272 GGACTGATGCAACTAAGCTTCAA 59.247 43.478 0.00 0.00 44.66 2.69
9439 10547 4.142730 GGACTGATGCAACTAAGCTTCAAG 60.143 45.833 0.00 0.00 44.66 3.02
9440 10548 3.190118 ACTGATGCAACTAAGCTTCAAGC 59.810 43.478 0.00 0.00 44.66 4.01
9441 10549 3.148412 TGATGCAACTAAGCTTCAAGCA 58.852 40.909 13.10 10.23 45.56 3.91
9442 10550 3.189910 TGATGCAACTAAGCTTCAAGCAG 59.810 43.478 13.10 3.42 45.56 4.24
9443 10551 1.881973 TGCAACTAAGCTTCAAGCAGG 59.118 47.619 13.10 3.45 45.56 4.85
9444 10552 1.882623 GCAACTAAGCTTCAAGCAGGT 59.117 47.619 13.10 4.12 45.56 4.00
9445 10553 3.074412 GCAACTAAGCTTCAAGCAGGTA 58.926 45.455 13.10 0.00 45.56 3.08
9446 10554 3.691609 GCAACTAAGCTTCAAGCAGGTAT 59.308 43.478 13.10 0.00 45.56 2.73
9447 10555 4.201861 GCAACTAAGCTTCAAGCAGGTATC 60.202 45.833 13.10 0.00 45.56 2.24
9448 10556 5.181748 CAACTAAGCTTCAAGCAGGTATCT 58.818 41.667 13.10 0.00 45.56 1.98
9449 10557 5.017294 ACTAAGCTTCAAGCAGGTATCTC 57.983 43.478 13.10 0.00 45.56 2.75
9450 10558 4.714308 ACTAAGCTTCAAGCAGGTATCTCT 59.286 41.667 13.10 0.00 45.56 3.10
9451 10559 4.566426 AAGCTTCAAGCAGGTATCTCTT 57.434 40.909 13.10 0.00 45.56 2.85
9463 10571 5.582665 GCAGGTATCTCTTTAGGTTTCACTG 59.417 44.000 0.00 0.00 0.00 3.66
9472 10580 8.429641 TCTCTTTAGGTTTCACTGTTATGTTCT 58.570 33.333 0.00 0.00 0.00 3.01
9476 10584 6.867662 AGGTTTCACTGTTATGTTCTTCTG 57.132 37.500 0.00 0.00 0.00 3.02
9507 10615 7.509141 TTTGTTCATCATGCTCTGTTTTCTA 57.491 32.000 0.00 0.00 0.00 2.10
9508 10616 7.692460 TTGTTCATCATGCTCTGTTTTCTAT 57.308 32.000 0.00 0.00 0.00 1.98
9532 10640 2.582052 AGATTTTCTTTGGGCGTGTCA 58.418 42.857 0.00 0.00 0.00 3.58
9535 10643 2.570442 TTTCTTTGGGCGTGTCAAAC 57.430 45.000 0.00 0.00 31.71 2.93
9541 10649 2.264005 TGGGCGTGTCAAACTGTTAT 57.736 45.000 0.00 0.00 0.00 1.89
9547 10655 4.455124 GCGTGTCAAACTGTTATGAGTTC 58.545 43.478 0.00 0.00 35.01 3.01
9577 10689 4.747108 GGTATGTTCTCCATGATTGAGTCG 59.253 45.833 0.00 0.00 34.86 4.18
9587 10699 2.688507 TGATTGAGTCGTCTCCTTTGC 58.311 47.619 7.21 0.00 39.75 3.68
9595 10707 5.122239 TGAGTCGTCTCCTTTGCAATATTTG 59.878 40.000 0.00 0.00 39.75 2.32
9599 10711 6.312918 GTCGTCTCCTTTGCAATATTTGTCTA 59.687 38.462 0.00 0.00 0.00 2.59
9601 10713 6.456988 CGTCTCCTTTGCAATATTTGTCTACC 60.457 42.308 0.00 0.00 0.00 3.18
9613 10726 9.965824 CAATATTTGTCTACCACTTTTTGTCTT 57.034 29.630 0.00 0.00 0.00 3.01
9641 10756 5.669164 ACACTTTACACAACAACCCAATT 57.331 34.783 0.00 0.00 0.00 2.32
9752 10875 8.643324 ACTAACAGAGCAGGTTAGAATATAAGG 58.357 37.037 21.51 1.98 46.74 2.69
9786 10909 2.234661 CAGGGAGTGTCATTGCTACTCA 59.765 50.000 16.63 0.00 41.93 3.41
9854 10977 3.709653 TCAGTCTTACTGTCAAGGTTGGT 59.290 43.478 6.93 0.00 46.03 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.449719 GTCCCTCAATTCTTCTCAAAGTATAAA 57.550 33.333 0.00 0.00 33.95 1.40
2 3 8.380742 AGTCCCTCAATTCTTCTCAAAGTATA 57.619 34.615 0.00 0.00 33.95 1.47
3 4 7.264294 AGTCCCTCAATTCTTCTCAAAGTAT 57.736 36.000 0.00 0.00 33.95 2.12
4 5 6.688073 AGTCCCTCAATTCTTCTCAAAGTA 57.312 37.500 0.00 0.00 33.95 2.24
18 19 9.470399 GGGAAAAGTATATTTTTAGTCCCTCAA 57.530 33.333 16.34 0.00 32.70 3.02
19 20 8.842764 AGGGAAAAGTATATTTTTAGTCCCTCA 58.157 33.333 18.90 0.00 37.36 3.86
20 21 9.696572 AAGGGAAAAGTATATTTTTAGTCCCTC 57.303 33.333 22.35 6.46 39.31 4.30
21 22 9.696572 GAAGGGAAAAGTATATTTTTAGTCCCT 57.303 33.333 18.90 18.90 40.72 4.20
22 23 9.470399 TGAAGGGAAAAGTATATTTTTAGTCCC 57.530 33.333 16.05 16.05 34.31 4.46
36 37 8.934023 TGTGACTATAAATTGAAGGGAAAAGT 57.066 30.769 0.00 0.00 0.00 2.66
37 38 9.793252 CATGTGACTATAAATTGAAGGGAAAAG 57.207 33.333 0.00 0.00 0.00 2.27
38 39 9.308000 ACATGTGACTATAAATTGAAGGGAAAA 57.692 29.630 0.00 0.00 0.00 2.29
39 40 8.739039 CACATGTGACTATAAATTGAAGGGAAA 58.261 33.333 21.64 0.00 0.00 3.13
40 41 8.106462 TCACATGTGACTATAAATTGAAGGGAA 58.894 33.333 24.56 0.00 34.14 3.97
41 42 7.629157 TCACATGTGACTATAAATTGAAGGGA 58.371 34.615 24.56 0.00 34.14 4.20
42 43 7.467811 GCTCACATGTGACTATAAATTGAAGGG 60.468 40.741 24.56 9.93 35.46 3.95
43 44 7.066163 TGCTCACATGTGACTATAAATTGAAGG 59.934 37.037 24.56 10.55 35.46 3.46
44 45 7.977904 TGCTCACATGTGACTATAAATTGAAG 58.022 34.615 24.56 10.97 35.46 3.02
45 46 7.823799 TCTGCTCACATGTGACTATAAATTGAA 59.176 33.333 24.56 5.51 35.46 2.69
46 47 7.330262 TCTGCTCACATGTGACTATAAATTGA 58.670 34.615 24.56 9.45 35.46 2.57
47 48 7.543947 TCTGCTCACATGTGACTATAAATTG 57.456 36.000 24.56 12.37 35.46 2.32
48 49 8.743085 AATCTGCTCACATGTGACTATAAATT 57.257 30.769 24.56 15.08 35.46 1.82
49 50 8.743085 AAATCTGCTCACATGTGACTATAAAT 57.257 30.769 24.56 10.42 35.46 1.40
50 51 7.280876 GGAAATCTGCTCACATGTGACTATAAA 59.719 37.037 24.56 8.63 35.46 1.40
147 167 3.441572 CGAAATGGCTCTGAGGTTTCAAT 59.558 43.478 6.83 0.00 31.69 2.57
192 212 1.253034 CGAGTACGAATTCGCTTGCTC 59.747 52.381 27.03 22.67 44.43 4.26
209 229 5.389935 GGTGAGAAAACTGAAATAGCACGAG 60.390 44.000 0.00 0.00 0.00 4.18
245 265 2.358957 CTCCGCATTGAATTGGACTGA 58.641 47.619 0.00 0.00 0.00 3.41
246 266 1.202222 GCTCCGCATTGAATTGGACTG 60.202 52.381 0.00 0.00 0.00 3.51
276 296 6.295011 CCCCTAATGCTTTGTTTGTATGTTCA 60.295 38.462 0.00 0.00 0.00 3.18
278 298 5.777732 TCCCCTAATGCTTTGTTTGTATGTT 59.222 36.000 0.00 0.00 0.00 2.71
304 324 6.555463 TTCTAAGGGTATGTTAGGTTCTGG 57.445 41.667 0.00 0.00 0.00 3.86
307 327 5.821470 GGCTTTCTAAGGGTATGTTAGGTTC 59.179 44.000 0.00 0.00 0.00 3.62
339 359 6.370453 ACCGGAATTAAGTTTTAGGGCATAT 58.630 36.000 9.46 0.00 0.00 1.78
340 360 5.757988 ACCGGAATTAAGTTTTAGGGCATA 58.242 37.500 9.46 0.00 0.00 3.14
375 396 2.961062 GGCAGCTAATGGAAATCATGGT 59.039 45.455 0.00 0.00 35.99 3.55
411 438 4.973663 AGTTTTTGTTGTATTCTTTCGCGG 59.026 37.500 6.13 0.00 0.00 6.46
419 446 5.342259 CCGCTAGCAAGTTTTTGTTGTATTC 59.658 40.000 16.45 0.00 36.65 1.75
478 505 4.201950 GGTGGATTTCATGTTTCTCCATCG 60.202 45.833 10.63 0.00 38.23 3.84
485 512 1.543802 TGGCGGTGGATTTCATGTTTC 59.456 47.619 0.00 0.00 0.00 2.78
488 515 0.038166 AGTGGCGGTGGATTTCATGT 59.962 50.000 0.00 0.00 0.00 3.21
490 517 2.806745 CGATAGTGGCGGTGGATTTCAT 60.807 50.000 0.00 0.00 0.00 2.57
663 690 2.970324 GAGACAAACGCCGGCACA 60.970 61.111 28.98 0.00 0.00 4.57
668 695 1.428448 TTCTCATGAGACAAACGCCG 58.572 50.000 25.07 0.00 37.14 6.46
671 698 2.604914 CCGGATTCTCATGAGACAAACG 59.395 50.000 25.07 23.02 37.14 3.60
674 701 2.831526 TCACCGGATTCTCATGAGACAA 59.168 45.455 25.07 12.24 37.14 3.18
676 703 2.690497 TCTCACCGGATTCTCATGAGAC 59.310 50.000 25.07 14.29 40.59 3.36
680 707 1.759445 AGGTCTCACCGGATTCTCATG 59.241 52.381 9.46 0.00 44.90 3.07
690 717 6.683974 ATATTTTGATTTGAGGTCTCACCG 57.316 37.500 0.00 0.00 44.90 4.94
829 856 9.973246 GATTCTGTAGTGTATATGTTGTTGTTG 57.027 33.333 0.00 0.00 0.00 3.33
832 1173 8.407457 ACGATTCTGTAGTGTATATGTTGTTG 57.593 34.615 0.00 0.00 0.00 3.33
917 1262 7.340999 GGGATAAGGTTTTGGAATTTGCTACTA 59.659 37.037 0.00 0.00 0.00 1.82
918 1263 6.154534 GGGATAAGGTTTTGGAATTTGCTACT 59.845 38.462 0.00 0.00 0.00 2.57
1035 1432 3.015145 ATCGGGTTGGGGTGGGAG 61.015 66.667 0.00 0.00 0.00 4.30
1036 1433 3.334891 CATCGGGTTGGGGTGGGA 61.335 66.667 0.00 0.00 0.00 4.37
1389 1816 4.444733 CCAGCCACATATTCACTCATGGTA 60.445 45.833 0.00 0.00 0.00 3.25
1392 1819 2.292569 GCCAGCCACATATTCACTCATG 59.707 50.000 0.00 0.00 0.00 3.07
1397 1824 3.134458 GAGTAGCCAGCCACATATTCAC 58.866 50.000 0.00 0.00 0.00 3.18
1399 1826 2.104792 TGGAGTAGCCAGCCACATATTC 59.895 50.000 0.00 0.00 43.33 1.75
1400 1827 2.126882 TGGAGTAGCCAGCCACATATT 58.873 47.619 0.00 0.00 43.33 1.28
1401 1828 1.806496 TGGAGTAGCCAGCCACATAT 58.194 50.000 0.00 0.00 43.33 1.78
1402 1829 3.315544 TGGAGTAGCCAGCCACATA 57.684 52.632 0.00 0.00 43.33 2.29
1403 1830 4.152248 TGGAGTAGCCAGCCACAT 57.848 55.556 0.00 0.00 43.33 3.21
1450 1877 5.886960 AACTGCAGAACCATCATTTCTAC 57.113 39.130 23.35 0.00 31.86 2.59
1451 1878 6.003326 TGAAACTGCAGAACCATCATTTCTA 58.997 36.000 23.35 5.65 31.86 2.10
1488 1918 0.791983 CAACAATTCGAGCGCTGCAG 60.792 55.000 18.48 10.11 0.00 4.41
1490 1920 1.512734 CCAACAATTCGAGCGCTGC 60.513 57.895 18.48 5.60 0.00 5.25
1493 1923 0.517316 AACTCCAACAATTCGAGCGC 59.483 50.000 0.00 0.00 0.00 5.92
1494 1924 2.969443 AAACTCCAACAATTCGAGCG 57.031 45.000 0.00 0.00 0.00 5.03
1532 1963 2.824341 GGCCAGTACAGTACAGTACAGT 59.176 50.000 25.01 13.11 45.25 3.55
1561 1992 0.109781 CAATTACACCACTGCGTGCC 60.110 55.000 3.56 0.00 37.25 5.01
1595 2026 0.030369 CGTATCCTAGTGCACGACCC 59.970 60.000 12.01 0.00 36.53 4.46
1656 2088 5.220739 GCAGTTGCATAACAGAGGATACTTG 60.221 44.000 0.00 0.00 43.47 3.16
1716 2159 7.710676 TCCGGGAAGAATAAATTTCATTTCA 57.289 32.000 0.00 0.00 33.82 2.69
1717 2160 7.169813 GCATCCGGGAAGAATAAATTTCATTTC 59.830 37.037 0.00 0.00 33.82 2.17
1718 2161 6.986231 GCATCCGGGAAGAATAAATTTCATTT 59.014 34.615 0.00 0.00 36.29 2.32
1719 2162 6.098124 TGCATCCGGGAAGAATAAATTTCATT 59.902 34.615 0.00 0.00 0.00 2.57
1720 2163 5.598005 TGCATCCGGGAAGAATAAATTTCAT 59.402 36.000 0.00 0.00 0.00 2.57
1751 2194 2.698797 GGGTAGGATTCGATTCAGGACA 59.301 50.000 9.36 0.00 0.00 4.02
1761 2204 3.031736 TCCTCTTTCAGGGTAGGATTCG 58.968 50.000 0.00 0.00 43.67 3.34
1811 2264 2.234414 CCCCACTGCACAGCAATTTAAT 59.766 45.455 0.00 0.00 38.41 1.40
1812 2265 1.617850 CCCCACTGCACAGCAATTTAA 59.382 47.619 0.00 0.00 38.41 1.52
1813 2266 1.255882 CCCCACTGCACAGCAATTTA 58.744 50.000 0.00 0.00 38.41 1.40
1838 2291 2.921972 GGGGTGCCCAACATGCAA 60.922 61.111 9.76 0.00 44.65 4.08
1980 2433 1.273552 CCCCAGAGGAGAGGAGACTTT 60.274 57.143 0.00 0.00 38.67 2.66
1983 2436 1.075600 CCCCCAGAGGAGAGGAGAC 60.076 68.421 0.00 0.00 38.24 3.36
2027 2480 6.661805 AGACACCAAACTTACCAAAAGAAAGA 59.338 34.615 0.00 0.00 0.00 2.52
2028 2481 6.863275 AGACACCAAACTTACCAAAAGAAAG 58.137 36.000 0.00 0.00 0.00 2.62
2032 2485 4.803613 GCAAGACACCAAACTTACCAAAAG 59.196 41.667 0.00 0.00 0.00 2.27
2066 2527 6.183359 CGCACAAAGTTACATTTCACATCATG 60.183 38.462 0.00 0.00 0.00 3.07
2074 2539 3.664025 GTCTGCGCACAAAGTTACATTTC 59.336 43.478 5.66 0.00 0.00 2.17
2148 2613 6.340522 ACAAATTATTGAAGGCATTACCTGC 58.659 36.000 0.00 0.00 45.98 4.85
2250 2715 1.135046 CGTGAGAGCACACTTGACTG 58.865 55.000 0.00 0.00 45.41 3.51
2280 2745 3.803186 AGCATATCTAATTGGCAGCCT 57.197 42.857 14.15 0.00 0.00 4.58
2345 2817 4.744795 AGTACCAGAACTAATGGAGCTG 57.255 45.455 0.00 0.00 40.51 4.24
2346 2818 5.958987 ACTTAGTACCAGAACTAATGGAGCT 59.041 40.000 0.00 0.00 40.30 4.09
2362 2834 7.043524 GCTCAATTACCGAAGCTTACTTAGTAC 60.044 40.741 0.00 0.00 35.82 2.73
2541 3026 1.762708 CCAATACCCATGGTTTCGCT 58.237 50.000 11.73 0.00 37.09 4.93
2559 3044 0.621609 TGTATGGCAGGGGTACAACC 59.378 55.000 0.00 0.00 37.60 3.77
2685 3178 5.575606 ACGTTTCTGTACCAACATTCTATCG 59.424 40.000 0.00 0.00 34.37 2.92
2729 3222 8.366671 AGTACTACACAGAACATTTTCACTTC 57.633 34.615 0.00 0.00 33.72 3.01
2760 3253 5.129485 ACATCCTCCTAATGAACCAGTAGTG 59.871 44.000 0.00 0.00 31.20 2.74
2784 3277 6.336566 TGATTTAAGCTGCAACACAAGAAAA 58.663 32.000 1.02 0.00 0.00 2.29
2935 3428 3.865745 CGAACGATGCAGTAAGAAAGGAT 59.134 43.478 0.00 0.00 0.00 3.24
3244 3739 7.067372 TGACATGGCAGAACATAGATAAAAAGG 59.933 37.037 0.00 0.00 0.00 3.11
3245 3740 7.988737 TGACATGGCAGAACATAGATAAAAAG 58.011 34.615 0.00 0.00 0.00 2.27
3602 4128 4.462508 TCTGGATCTAGAAACTGCACTG 57.537 45.455 6.28 0.00 0.00 3.66
3645 4171 5.474532 ACAAGATATCTGCAGCAGAAAACAA 59.525 36.000 28.78 12.34 44.04 2.83
3697 4223 4.859798 CGTTGTTCCTCAGATGTTAGAGAC 59.140 45.833 0.00 0.00 33.74 3.36
3789 4315 4.876679 GTGTATTCCTCTACCTGCTTTTCC 59.123 45.833 0.00 0.00 0.00 3.13
4160 4968 9.994432 CAATATGGAAACTGAAGTAGACAAATC 57.006 33.333 0.00 0.00 0.00 2.17
4201 5009 2.632512 GCAACTCTGAAATGGGGGAAAA 59.367 45.455 0.00 0.00 0.00 2.29
4205 5013 1.928868 AAGCAACTCTGAAATGGGGG 58.071 50.000 0.00 0.00 0.00 5.40
4254 5062 8.774546 TCCATTGGCCAATTTACTGAATATTA 57.225 30.769 28.68 0.00 0.00 0.98
4278 5086 3.674997 TGCAGAGATAACAACCCAACTC 58.325 45.455 0.00 0.00 0.00 3.01
4505 5314 2.388890 CTGCATAAGCCTCCTCGGGG 62.389 65.000 0.00 0.00 41.13 5.73
4614 5423 6.126768 CCAAATCCATTACTCTCTACCCAAGA 60.127 42.308 0.00 0.00 0.00 3.02
4677 5486 1.531149 ACGTGTGCAGAACATTGCTAC 59.469 47.619 0.00 0.00 44.38 3.58
4774 5583 1.310216 AAGGTTCGCCCCAATAACGC 61.310 55.000 0.00 0.00 38.27 4.84
4819 5628 4.701651 TCTGTAAGAGGCACCATTTCATTG 59.298 41.667 0.00 0.00 38.67 2.82
4888 5697 2.670148 GGGCTCCCCAGTACCAGTG 61.670 68.421 0.00 0.00 44.65 3.66
5002 5812 6.163135 ACAACTAGAGAATATCTTTCGGGG 57.837 41.667 0.00 0.00 39.64 5.73
5003 5813 6.018669 GCAACAACTAGAGAATATCTTTCGGG 60.019 42.308 0.00 0.00 39.64 5.14
5004 5814 6.535150 TGCAACAACTAGAGAATATCTTTCGG 59.465 38.462 0.00 0.00 39.64 4.30
5005 5815 7.525688 TGCAACAACTAGAGAATATCTTTCG 57.474 36.000 0.00 0.00 39.64 3.46
5006 5816 8.887717 ACATGCAACAACTAGAGAATATCTTTC 58.112 33.333 0.00 0.00 39.64 2.62
5007 5817 8.798859 ACATGCAACAACTAGAGAATATCTTT 57.201 30.769 0.00 0.00 39.64 2.52
5010 5820 9.703892 ATAGACATGCAACAACTAGAGAATATC 57.296 33.333 0.00 0.00 0.00 1.63
5013 5823 9.890629 TTTATAGACATGCAACAACTAGAGAAT 57.109 29.630 0.00 0.00 0.00 2.40
5037 5847 7.602265 CCGAAAACCTTTGTTCCAATATGATTT 59.398 33.333 0.00 0.00 32.15 2.17
5046 5856 5.656213 TTAAACCGAAAACCTTTGTTCCA 57.344 34.783 0.00 0.00 32.15 3.53
5047 5857 6.964741 TTTTAAACCGAAAACCTTTGTTCC 57.035 33.333 0.00 0.00 32.15 3.62
5102 5912 5.128008 CAGTTTTCCCTTTGTTCCAACCTTA 59.872 40.000 0.00 0.00 0.00 2.69
5113 5923 2.212652 GCCTTTGCAGTTTTCCCTTTG 58.787 47.619 0.00 0.00 37.47 2.77
5129 5939 3.009143 AGTGGGATTAACTCTTTCGCCTT 59.991 43.478 0.00 0.00 0.00 4.35
5186 5996 9.549078 TGTGTCATCTTTGCGGTTTATATATTA 57.451 29.630 0.00 0.00 0.00 0.98
5190 6000 6.112734 TCTGTGTCATCTTTGCGGTTTATAT 58.887 36.000 0.00 0.00 0.00 0.86
5223 6033 4.044426 GGTGACATGCAACTTTTGAGAAC 58.956 43.478 0.00 0.00 0.00 3.01
5226 6036 3.304928 GGAGGTGACATGCAACTTTTGAG 60.305 47.826 8.74 0.00 46.92 3.02
5227 6037 2.622942 GGAGGTGACATGCAACTTTTGA 59.377 45.455 8.74 0.00 46.92 2.69
5229 6039 2.949447 AGGAGGTGACATGCAACTTTT 58.051 42.857 8.74 0.00 46.92 2.27
5234 6044 3.788227 ACTAAAGGAGGTGACATGCAA 57.212 42.857 0.00 0.00 0.00 4.08
5256 6066 5.618236 ACACATGTATATGCAGAGCAATCT 58.382 37.500 0.00 0.00 43.62 2.40
5259 6069 6.513806 AAAACACATGTATATGCAGAGCAA 57.486 33.333 0.00 0.00 43.62 3.91
5341 6156 2.622942 TCAAGTTGCAATGGTGTTCCTC 59.377 45.455 0.59 0.00 34.23 3.71
5343 6158 2.288395 CCTCAAGTTGCAATGGTGTTCC 60.288 50.000 0.59 0.00 0.00 3.62
5344 6159 2.288395 CCCTCAAGTTGCAATGGTGTTC 60.288 50.000 0.59 0.00 0.00 3.18
5345 6160 1.688197 CCCTCAAGTTGCAATGGTGTT 59.312 47.619 0.59 0.00 0.00 3.32
5346 6161 1.331214 CCCTCAAGTTGCAATGGTGT 58.669 50.000 0.59 0.00 0.00 4.16
5347 6162 1.270550 GACCCTCAAGTTGCAATGGTG 59.729 52.381 0.59 1.26 0.00 4.17
5443 6258 7.994851 GCAAAGCGCTTAAATACTATGTATC 57.005 36.000 25.33 0.00 37.77 2.24
5460 6275 0.665369 CCTGAAAAGGCAGCAAAGCG 60.665 55.000 0.00 0.00 34.56 4.68
5462 6277 2.896745 AACCTGAAAAGGCAGCAAAG 57.103 45.000 0.00 0.00 34.56 2.77
5494 6309 1.960689 TGCAGGCTTCCCAGTTAAAAC 59.039 47.619 0.00 0.00 0.00 2.43
5636 6457 4.773149 ACACCACAAAAAGGTTCCTAACAA 59.227 37.500 0.00 0.00 37.23 2.83
5656 6477 5.971202 CACAGAAAGGACAAATTGTGTACAC 59.029 40.000 19.36 19.36 44.53 2.90
5720 6721 9.683069 CTCAAATAATACCTGCATAACCATTTC 57.317 33.333 0.00 0.00 0.00 2.17
5903 6904 3.362831 GCAAATGCAAGACAGAATGTTCG 59.637 43.478 0.00 0.00 46.51 3.95
5975 6976 4.415512 TCAATGGGTTAATAGAAGGGGAGG 59.584 45.833 0.00 0.00 0.00 4.30
5988 6989 0.322997 CCGTGGCCTTCAATGGGTTA 60.323 55.000 3.32 0.00 0.00 2.85
5993 6994 0.527565 CTTTCCCGTGGCCTTCAATG 59.472 55.000 3.32 0.00 0.00 2.82
6066 7067 7.499232 AGGTTACAAGCTGATAACAATGGTATC 59.501 37.037 11.18 11.18 35.05 2.24
6069 7070 5.570320 AGGTTACAAGCTGATAACAATGGT 58.430 37.500 17.64 0.00 35.05 3.55
6088 7097 4.585955 AATCTCATACGATACGCAGGTT 57.414 40.909 0.00 0.00 0.00 3.50
6099 7108 4.034048 ACGCCTTTAGCAAAATCTCATACG 59.966 41.667 0.00 0.00 44.04 3.06
6142 7151 9.658799 CAGACCTCTCAGATTGTTTTAGATTTA 57.341 33.333 0.00 0.00 0.00 1.40
6145 7154 7.487822 TCAGACCTCTCAGATTGTTTTAGAT 57.512 36.000 0.00 0.00 0.00 1.98
6146 7155 6.918067 TCAGACCTCTCAGATTGTTTTAGA 57.082 37.500 0.00 0.00 0.00 2.10
6147 7156 7.821359 TGATTCAGACCTCTCAGATTGTTTTAG 59.179 37.037 0.00 0.00 0.00 1.85
6148 7157 7.679783 TGATTCAGACCTCTCAGATTGTTTTA 58.320 34.615 0.00 0.00 0.00 1.52
6156 7165 2.812658 TGCTGATTCAGACCTCTCAGA 58.187 47.619 17.87 0.00 37.85 3.27
6165 7174 0.328926 TGGGCACATGCTGATTCAGA 59.671 50.000 17.87 3.32 41.70 3.27
6173 7182 2.220653 ATGTTAGTTGGGCACATGCT 57.779 45.000 3.48 0.00 41.70 3.79
6175 7184 7.094508 TGTTATTATGTTAGTTGGGCACATG 57.905 36.000 0.00 0.00 33.19 3.21
6200 7209 2.490903 GAGCTGAAATTCCACTGTGCAT 59.509 45.455 1.29 0.00 0.00 3.96
6228 7237 0.753262 TCCTAAGAGCTGAATCCGGC 59.247 55.000 0.00 0.00 44.96 6.13
6252 7269 4.783227 AGAAAGAGTAAGCATTGGTCCCTA 59.217 41.667 0.00 0.00 0.00 3.53
6264 7281 4.621886 GCGTAGTGAACCAGAAAGAGTAAG 59.378 45.833 0.00 0.00 0.00 2.34
6285 7302 0.954452 ACAAGCAGGGAGAAAAAGCG 59.046 50.000 0.00 0.00 0.00 4.68
6309 7326 8.951614 AGATTTGTGTACTACAGGCCTATATA 57.048 34.615 3.98 0.00 41.10 0.86
6311 7328 8.003044 ACTAGATTTGTGTACTACAGGCCTATA 58.997 37.037 3.98 0.00 41.10 1.31
6312 7329 6.839657 ACTAGATTTGTGTACTACAGGCCTAT 59.160 38.462 3.98 0.00 41.10 2.57
6339 7356 4.528596 ACACTTATTATGGATCGGAGGGAG 59.471 45.833 0.00 0.00 0.00 4.30
6340 7357 4.489737 ACACTTATTATGGATCGGAGGGA 58.510 43.478 0.00 0.00 0.00 4.20
6341 7358 4.618460 CGACACTTATTATGGATCGGAGGG 60.618 50.000 0.00 0.00 0.00 4.30
6342 7359 4.022242 ACGACACTTATTATGGATCGGAGG 60.022 45.833 0.00 0.00 32.56 4.30
6343 7360 5.122512 ACGACACTTATTATGGATCGGAG 57.877 43.478 0.00 0.00 32.56 4.63
6344 7361 5.766670 ACTACGACACTTATTATGGATCGGA 59.233 40.000 0.00 0.00 32.56 4.55
6345 7362 6.010294 ACTACGACACTTATTATGGATCGG 57.990 41.667 0.00 0.00 32.56 4.18
6346 7363 7.925703 AAACTACGACACTTATTATGGATCG 57.074 36.000 0.00 0.00 0.00 3.69
6347 7364 9.309516 TCAAAACTACGACACTTATTATGGATC 57.690 33.333 0.00 0.00 0.00 3.36
6348 7365 9.661563 TTCAAAACTACGACACTTATTATGGAT 57.338 29.630 0.00 0.00 0.00 3.41
6349 7366 8.928733 GTTCAAAACTACGACACTTATTATGGA 58.071 33.333 0.00 0.00 0.00 3.41
6350 7367 8.932791 AGTTCAAAACTACGACACTTATTATGG 58.067 33.333 0.00 0.00 40.69 2.74
6354 7371 8.985805 CCTTAGTTCAAAACTACGACACTTATT 58.014 33.333 5.26 0.00 43.30 1.40
6355 7372 8.146412 ACCTTAGTTCAAAACTACGACACTTAT 58.854 33.333 5.26 0.00 43.30 1.73
6356 7373 7.491682 ACCTTAGTTCAAAACTACGACACTTA 58.508 34.615 5.26 0.00 43.30 2.24
6357 7374 6.343703 ACCTTAGTTCAAAACTACGACACTT 58.656 36.000 5.26 0.00 43.30 3.16
6358 7375 5.910614 ACCTTAGTTCAAAACTACGACACT 58.089 37.500 5.26 0.00 43.30 3.55
6359 7376 6.256321 TCAACCTTAGTTCAAAACTACGACAC 59.744 38.462 5.26 0.00 43.30 3.67
6360 7377 6.339730 TCAACCTTAGTTCAAAACTACGACA 58.660 36.000 5.26 0.00 43.30 4.35
6361 7378 6.833342 TCAACCTTAGTTCAAAACTACGAC 57.167 37.500 5.26 0.00 43.30 4.34
6362 7379 7.043565 AGTTCAACCTTAGTTCAAAACTACGA 58.956 34.615 5.26 0.00 43.30 3.43
6363 7380 7.242914 AGTTCAACCTTAGTTCAAAACTACG 57.757 36.000 0.00 0.00 43.30 3.51
6364 7381 9.926751 GTTAGTTCAACCTTAGTTCAAAACTAC 57.073 33.333 0.00 0.00 43.30 2.73
6365 7382 9.895138 AGTTAGTTCAACCTTAGTTCAAAACTA 57.105 29.630 0.00 0.00 39.21 2.24
6366 7383 8.803397 AGTTAGTTCAACCTTAGTTCAAAACT 57.197 30.769 0.00 0.00 40.59 2.66
6367 7384 9.850628 AAAGTTAGTTCAACCTTAGTTCAAAAC 57.149 29.630 0.00 0.00 37.93 2.43
6370 7387 9.895138 ACTAAAGTTAGTTCAACCTTAGTTCAA 57.105 29.630 5.67 0.00 45.72 2.69
6385 7402 7.992008 TGTTGCAGCTTTAAACTAAAGTTAGT 58.008 30.769 1.17 0.00 45.30 2.24
6386 7403 8.850454 TTGTTGCAGCTTTAAACTAAAGTTAG 57.150 30.769 1.17 0.00 45.30 2.34
6387 7404 9.810545 AATTGTTGCAGCTTTAAACTAAAGTTA 57.189 25.926 1.17 0.00 45.30 2.24
6388 7405 8.716646 AATTGTTGCAGCTTTAAACTAAAGTT 57.283 26.923 1.17 0.00 45.30 2.66
6389 7406 9.981114 ATAATTGTTGCAGCTTTAAACTAAAGT 57.019 25.926 1.17 0.00 45.30 2.66
6394 7411 8.558700 CCAAAATAATTGTTGCAGCTTTAAACT 58.441 29.630 1.17 0.00 0.00 2.66
6395 7412 8.555361 TCCAAAATAATTGTTGCAGCTTTAAAC 58.445 29.630 1.17 0.00 0.00 2.01
6396 7413 8.668510 TCCAAAATAATTGTTGCAGCTTTAAA 57.331 26.923 1.17 0.00 0.00 1.52
6397 7414 8.845413 ATCCAAAATAATTGTTGCAGCTTTAA 57.155 26.923 1.17 0.00 0.00 1.52
6398 7415 7.275341 CGATCCAAAATAATTGTTGCAGCTTTA 59.725 33.333 1.17 0.83 0.00 1.85
6399 7416 6.091169 CGATCCAAAATAATTGTTGCAGCTTT 59.909 34.615 1.17 0.00 0.00 3.51
6400 7417 5.577945 CGATCCAAAATAATTGTTGCAGCTT 59.422 36.000 1.17 0.00 0.00 3.74
6401 7418 5.104374 CGATCCAAAATAATTGTTGCAGCT 58.896 37.500 1.17 0.00 0.00 4.24
6402 7419 4.268405 CCGATCCAAAATAATTGTTGCAGC 59.732 41.667 0.00 0.00 0.00 5.25
6403 7420 5.649557 TCCGATCCAAAATAATTGTTGCAG 58.350 37.500 0.00 0.00 0.00 4.41
6404 7421 5.394005 CCTCCGATCCAAAATAATTGTTGCA 60.394 40.000 0.00 0.00 0.00 4.08
6405 7422 5.043248 CCTCCGATCCAAAATAATTGTTGC 58.957 41.667 0.00 0.00 0.00 4.17
6406 7423 5.451798 CCCCTCCGATCCAAAATAATTGTTG 60.452 44.000 0.00 0.00 0.00 3.33
6407 7424 4.649218 CCCCTCCGATCCAAAATAATTGTT 59.351 41.667 0.00 0.00 0.00 2.83
6408 7425 4.215109 CCCCTCCGATCCAAAATAATTGT 58.785 43.478 0.00 0.00 0.00 2.71
6409 7426 3.573967 CCCCCTCCGATCCAAAATAATTG 59.426 47.826 0.00 0.00 0.00 2.32
6410 7427 3.206639 ACCCCCTCCGATCCAAAATAATT 59.793 43.478 0.00 0.00 0.00 1.40
6411 7428 2.789399 ACCCCCTCCGATCCAAAATAAT 59.211 45.455 0.00 0.00 0.00 1.28
6412 7429 2.210644 ACCCCCTCCGATCCAAAATAA 58.789 47.619 0.00 0.00 0.00 1.40
6413 7430 1.901648 ACCCCCTCCGATCCAAAATA 58.098 50.000 0.00 0.00 0.00 1.40
6414 7431 1.901648 TACCCCCTCCGATCCAAAAT 58.098 50.000 0.00 0.00 0.00 1.82
6415 7432 1.671293 TTACCCCCTCCGATCCAAAA 58.329 50.000 0.00 0.00 0.00 2.44
6416 7433 1.901648 ATTACCCCCTCCGATCCAAA 58.098 50.000 0.00 0.00 0.00 3.28
6417 7434 2.799282 TATTACCCCCTCCGATCCAA 57.201 50.000 0.00 0.00 0.00 3.53
6418 7435 2.385765 AGATATTACCCCCTCCGATCCA 59.614 50.000 0.00 0.00 0.00 3.41
6419 7436 3.117552 AGATATTACCCCCTCCGATCC 57.882 52.381 0.00 0.00 0.00 3.36
6420 7437 5.246307 CAAAAGATATTACCCCCTCCGATC 58.754 45.833 0.00 0.00 0.00 3.69
6421 7438 4.042934 CCAAAAGATATTACCCCCTCCGAT 59.957 45.833 0.00 0.00 0.00 4.18
6422 7439 3.393278 CCAAAAGATATTACCCCCTCCGA 59.607 47.826 0.00 0.00 0.00 4.55
6423 7440 3.751518 CCAAAAGATATTACCCCCTCCG 58.248 50.000 0.00 0.00 0.00 4.63
6424 7441 3.497332 GCCAAAAGATATTACCCCCTCC 58.503 50.000 0.00 0.00 0.00 4.30
6425 7442 3.140332 AGGCCAAAAGATATTACCCCCTC 59.860 47.826 5.01 0.00 0.00 4.30
6426 7443 3.139330 AGGCCAAAAGATATTACCCCCT 58.861 45.455 5.01 0.00 0.00 4.79
6427 7444 3.117284 TGAGGCCAAAAGATATTACCCCC 60.117 47.826 5.01 0.00 0.00 5.40
6428 7445 4.178956 TGAGGCCAAAAGATATTACCCC 57.821 45.455 5.01 0.00 0.00 4.95
6429 7446 5.140454 ACATGAGGCCAAAAGATATTACCC 58.860 41.667 5.01 0.00 0.00 3.69
6430 7447 6.715347 AACATGAGGCCAAAAGATATTACC 57.285 37.500 5.01 0.00 0.00 2.85
6460 7477 7.346751 AGAGAAGTAGAGAGATCATTTGGTC 57.653 40.000 0.00 0.00 0.00 4.02
6799 7817 6.936900 TCTTAAGAACATAGAAGCAAGCAAGT 59.063 34.615 1.68 0.00 0.00 3.16
6841 7859 5.533528 TGGATCATCCTTCAGCACATAATTG 59.466 40.000 4.96 0.00 37.46 2.32
6842 7860 5.698104 TGGATCATCCTTCAGCACATAATT 58.302 37.500 4.96 0.00 37.46 1.40
6958 7976 5.895636 ACATCTCATATAAGCGGAGAGAG 57.104 43.478 0.00 0.00 40.67 3.20
7211 8231 1.691976 AGGTTGGTTCGACATCAGTGA 59.308 47.619 0.00 0.00 0.00 3.41
7263 8283 0.321653 CTGTGTGACCTACCCTTGCC 60.322 60.000 0.00 0.00 0.00 4.52
7434 8457 1.961793 TCTTTCTCCACACCAAACCG 58.038 50.000 0.00 0.00 0.00 4.44
7516 8539 0.250295 GCCGCCTCCATACTGCAATA 60.250 55.000 0.00 0.00 0.00 1.90
7542 8565 6.592994 GCAATTAAGGTAGTAAGGTTTCGTCT 59.407 38.462 0.00 0.00 0.00 4.18
7546 8569 7.443259 TGTGCAATTAAGGTAGTAAGGTTTC 57.557 36.000 0.00 0.00 0.00 2.78
7582 8605 2.752354 TCACAACAACACAACTTGAGGG 59.248 45.455 0.00 0.00 0.00 4.30
7625 8648 9.798994 ACCTACAAACAGAATAATAGACGTTAG 57.201 33.333 0.00 0.00 0.00 2.34
7824 8847 4.434713 AACTGACGCAACAGAAAAACTT 57.565 36.364 12.95 0.00 40.63 2.66
7940 9005 5.447683 GCATGAACGAAGAAATACTGCATGA 60.448 40.000 0.00 0.00 34.18 3.07
7980 9045 5.597806 TCTGTGCCTACCAATACTTTATCG 58.402 41.667 0.00 0.00 0.00 2.92
7982 9047 7.806180 AGATTCTGTGCCTACCAATACTTTAT 58.194 34.615 0.00 0.00 0.00 1.40
8072 9137 4.039124 ACCAAGCAACCTTTAGTTCCATTG 59.961 41.667 0.00 0.00 36.18 2.82
8145 9215 7.786178 TCTAGCAATTATGTGGTTGTATGAC 57.214 36.000 0.00 0.00 0.00 3.06
8147 9217 8.437360 TCTTCTAGCAATTATGTGGTTGTATG 57.563 34.615 0.00 0.00 0.00 2.39
8148 9218 9.632638 ATTCTTCTAGCAATTATGTGGTTGTAT 57.367 29.630 0.00 0.00 0.00 2.29
8164 9234 6.760298 TGAACATCACATCAGATTCTTCTAGC 59.240 38.462 0.00 0.00 0.00 3.42
8198 9268 1.961277 CGGTTGAGTGTCCCACTGC 60.961 63.158 0.86 0.00 45.44 4.40
8250 9320 1.476085 CAAGTGTGGTGCAAAAGGTGA 59.524 47.619 0.00 0.00 0.00 4.02
8301 9371 3.184541 GTTCATGAGCCAATGATTGTGC 58.815 45.455 4.27 7.38 36.48 4.57
8350 9420 3.008704 GCTTGGTACCAAAGGAAGGTAGA 59.991 47.826 26.90 1.54 42.01 2.59
8353 9423 1.544759 CGCTTGGTACCAAAGGAAGGT 60.545 52.381 26.90 0.00 43.14 3.50
8355 9425 2.076863 CTCGCTTGGTACCAAAGGAAG 58.923 52.381 26.90 16.44 35.33 3.46
8582 9662 8.585471 ACATGTGAAATTTCAATCCATAGACT 57.415 30.769 22.07 0.00 39.21 3.24
8657 9737 2.156917 TCATTCTTTGCCTGCACAGAG 58.843 47.619 7.91 0.00 34.72 3.35
8708 9788 2.562298 GGTCTTCCCATTGATTTGCACA 59.438 45.455 0.00 0.00 0.00 4.57
8780 9860 0.741326 TGTCGTCTGAGGCTGCTATC 59.259 55.000 0.00 0.00 0.00 2.08
8849 9929 4.664688 AACATTCAAGATCCTTCCAGGT 57.335 40.909 0.00 0.00 36.53 4.00
8930 10013 0.784495 ACTACTCTGACAGGACCCCA 59.216 55.000 1.81 0.00 0.00 4.96
8931 10014 1.550976 CAACTACTCTGACAGGACCCC 59.449 57.143 1.81 0.00 0.00 4.95
8979 10062 8.866956 CAAAAGAATGGAAATTTACAGATCTGC 58.133 33.333 22.83 4.20 0.00 4.26
9064 10155 8.668510 TCAAAGAGAGAAGCCATCATAAATAC 57.331 34.615 0.00 0.00 0.00 1.89
9092 10183 7.849804 TCTGCAGATCTTAAGTGGAAAATAC 57.150 36.000 13.74 0.00 0.00 1.89
9186 10286 6.038271 ACTTGGAAAATAATCAGGCGACATAC 59.962 38.462 0.00 0.00 0.00 2.39
9217 10317 5.284079 ACATGTGAAGCAACAACAGAATTC 58.716 37.500 0.00 0.00 32.81 2.17
9405 10505 3.760738 TGCATCAGTCCATTTGGTGTTA 58.239 40.909 0.00 0.00 36.34 2.41
9407 10507 2.291209 TGCATCAGTCCATTTGGTGT 57.709 45.000 0.00 0.00 36.34 4.16
9436 10544 6.092807 GTGAAACCTAAAGAGATACCTGCTTG 59.907 42.308 0.00 0.00 0.00 4.01
9437 10545 6.013293 AGTGAAACCTAAAGAGATACCTGCTT 60.013 38.462 0.00 0.00 37.80 3.91
9438 10546 5.485708 AGTGAAACCTAAAGAGATACCTGCT 59.514 40.000 0.00 0.00 37.80 4.24
9439 10547 5.582665 CAGTGAAACCTAAAGAGATACCTGC 59.417 44.000 0.00 0.00 37.80 4.85
9440 10548 6.702329 ACAGTGAAACCTAAAGAGATACCTG 58.298 40.000 0.00 0.00 37.80 4.00
9441 10549 6.936968 ACAGTGAAACCTAAAGAGATACCT 57.063 37.500 0.00 0.00 37.80 3.08
9442 10550 9.099454 CATAACAGTGAAACCTAAAGAGATACC 57.901 37.037 0.00 0.00 37.80 2.73
9443 10551 9.654663 ACATAACAGTGAAACCTAAAGAGATAC 57.345 33.333 0.00 0.00 37.80 2.24
9445 10553 9.220767 GAACATAACAGTGAAACCTAAAGAGAT 57.779 33.333 0.00 0.00 37.80 2.75
9446 10554 8.429641 AGAACATAACAGTGAAACCTAAAGAGA 58.570 33.333 0.00 0.00 37.80 3.10
9447 10555 8.608844 AGAACATAACAGTGAAACCTAAAGAG 57.391 34.615 0.00 0.00 37.80 2.85
9448 10556 8.974060 AAGAACATAACAGTGAAACCTAAAGA 57.026 30.769 0.00 0.00 37.80 2.52
9449 10557 9.057089 AGAAGAACATAACAGTGAAACCTAAAG 57.943 33.333 0.00 0.00 37.80 1.85
9450 10558 8.836413 CAGAAGAACATAACAGTGAAACCTAAA 58.164 33.333 0.00 0.00 37.80 1.85
9451 10559 8.208224 TCAGAAGAACATAACAGTGAAACCTAA 58.792 33.333 0.00 0.00 37.80 2.69
9485 10593 8.043113 AGTATAGAAAACAGAGCATGATGAACA 58.957 33.333 0.00 0.00 0.00 3.18
9507 10615 5.497474 ACACGCCCAAAGAAAATCTAGTAT 58.503 37.500 0.00 0.00 0.00 2.12
9508 10616 4.901868 ACACGCCCAAAGAAAATCTAGTA 58.098 39.130 0.00 0.00 0.00 1.82
9532 10640 7.881775 ACCTTTTCAGAACTCATAACAGTTT 57.118 32.000 0.00 0.00 36.71 2.66
9535 10643 8.553459 ACATACCTTTTCAGAACTCATAACAG 57.447 34.615 0.00 0.00 0.00 3.16
9541 10649 6.183361 TGGAGAACATACCTTTTCAGAACTCA 60.183 38.462 0.00 0.00 0.00 3.41
9547 10655 7.337689 TCAATCATGGAGAACATACCTTTTCAG 59.662 37.037 0.00 0.00 37.84 3.02
9577 10689 6.374333 TGGTAGACAAATATTGCAAAGGAGAC 59.626 38.462 1.71 0.00 0.00 3.36
9587 10699 9.965824 AAGACAAAAAGTGGTAGACAAATATTG 57.034 29.630 0.00 0.00 0.00 1.90
9595 10707 4.457466 TCCCAAGACAAAAAGTGGTAGAC 58.543 43.478 0.00 0.00 0.00 2.59
9599 10711 4.583073 GTGTATCCCAAGACAAAAAGTGGT 59.417 41.667 0.00 0.00 0.00 4.16
9601 10713 6.391227 AAGTGTATCCCAAGACAAAAAGTG 57.609 37.500 0.00 0.00 0.00 3.16
9613 10726 4.822896 GGTTGTTGTGTAAAGTGTATCCCA 59.177 41.667 0.00 0.00 0.00 4.37
9641 10756 2.317040 AGCAGCTACGCCCTAGAATAA 58.683 47.619 0.00 0.00 0.00 1.40
9752 10875 3.196685 ACACTCCCTGAGTTGCTTCTATC 59.803 47.826 0.00 0.00 41.37 2.08
9786 10909 2.092592 TGCAATGCTGAGATCCTCACAT 60.093 45.455 6.82 0.00 35.39 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.