Multiple sequence alignment - TraesCS3D01G018900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G018900 chr3D 100.000 4943 0 0 1 4943 6407415 6402473 0.000000e+00 9129.0
1 TraesCS3D01G018900 chr3D 93.750 64 3 1 4509 4572 555119636 555119698 1.460000e-15 95.3
2 TraesCS3D01G018900 chr3B 90.736 2731 174 41 1788 4455 7074527 7077241 0.000000e+00 3568.0
3 TraesCS3D01G018900 chr3B 85.179 1896 122 77 1 1786 7072640 7074486 0.000000e+00 1797.0
4 TraesCS3D01G018900 chr3B 92.037 427 22 5 1788 2204 632429213 632429637 1.530000e-164 590.0
5 TraesCS3D01G018900 chr3B 89.720 214 13 5 4695 4907 639683049 639683254 1.060000e-66 265.0
6 TraesCS3D01G018900 chr3B 88.660 194 15 3 4692 4884 159937225 159937412 3.850000e-56 230.0
7 TraesCS3D01G018900 chr3B 90.090 111 9 2 4699 4808 780363753 780363644 5.160000e-30 143.0
8 TraesCS3D01G018900 chr3B 93.548 62 2 2 4834 4895 780363646 780363587 1.890000e-14 91.6
9 TraesCS3D01G018900 chr3A 89.282 2034 153 41 2432 4451 13908115 13910097 0.000000e+00 2488.0
10 TraesCS3D01G018900 chr3A 88.877 1861 104 50 784 2556 13906177 13908022 0.000000e+00 2194.0
11 TraesCS3D01G018900 chr3A 79.358 436 31 27 334 732 13905507 13905920 8.210000e-63 252.0
12 TraesCS3D01G018900 chr3A 90.244 123 8 2 4575 4696 13958647 13958766 1.840000e-34 158.0
13 TraesCS3D01G018900 chr7B 90.959 542 17 16 1693 2204 27765275 27764736 0.000000e+00 701.0
14 TraesCS3D01G018900 chr7B 93.911 427 14 5 1788 2204 614367022 614367446 6.980000e-178 634.0
15 TraesCS3D01G018900 chr7B 85.603 257 20 10 4695 4942 122009079 122009327 2.280000e-63 254.0
16 TraesCS3D01G018900 chr7B 92.188 64 3 2 4509 4571 145742538 145742476 6.820000e-14 89.8
17 TraesCS3D01G018900 chr7B 91.667 60 5 0 4509 4568 43676003 43675944 3.170000e-12 84.2
18 TraesCS3D01G018900 chr4A 94.340 424 12 5 1791 2204 661516042 661515621 1.500000e-179 640.0
19 TraesCS3D01G018900 chr1A 93.443 427 15 8 1788 2204 191562144 191562567 5.430000e-174 621.0
20 TraesCS3D01G018900 chr1A 90.498 221 16 4 1570 1786 191561884 191562103 2.250000e-73 287.0
21 TraesCS3D01G018900 chr1B 93.396 424 16 7 1791 2204 20119678 20119257 7.030000e-173 617.0
22 TraesCS3D01G018900 chr1B 90.141 213 12 5 4696 4907 295087266 295087470 8.160000e-68 268.0
23 TraesCS3D01G018900 chr1B 92.771 83 3 2 1707 1786 20119804 20119722 3.130000e-22 117.0
24 TraesCS3D01G018900 chr1B 91.803 61 5 0 4509 4569 8197897 8197957 8.820000e-13 86.1
25 TraesCS3D01G018900 chr6A 93.889 360 11 4 1788 2138 204399441 204399798 2.620000e-147 532.0
26 TraesCS3D01G018900 chr6A 91.855 221 13 4 1570 1786 204399181 204399400 2.240000e-78 303.0
27 TraesCS3D01G018900 chr6A 95.833 72 2 1 2134 2204 204408324 204408395 1.120000e-21 115.0
28 TraesCS3D01G018900 chr7D 87.600 250 20 5 4695 4941 192503680 192503439 3.770000e-71 279.0
29 TraesCS3D01G018900 chr7D 92.188 64 4 1 4509 4571 597469785 597469722 6.820000e-14 89.8
30 TraesCS3D01G018900 chr7D 91.667 60 3 2 4509 4568 107248287 107248344 1.140000e-11 82.4
31 TraesCS3D01G018900 chr5A 87.149 249 21 5 4697 4942 437796334 437796574 6.300000e-69 272.0
32 TraesCS3D01G018900 chr6B 86.000 250 23 7 4695 4942 448757763 448758002 1.770000e-64 257.0
33 TraesCS3D01G018900 chr2B 93.220 59 3 1 4509 4567 449081680 449081623 8.820000e-13 86.1
34 TraesCS3D01G018900 chr2B 90.476 63 6 0 4509 4571 56292579 56292641 3.170000e-12 84.2
35 TraesCS3D01G018900 chr5D 91.667 60 4 1 4509 4568 296668660 296668602 1.140000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G018900 chr3D 6402473 6407415 4942 True 9129.000000 9129 100.0000 1 4943 1 chr3D.!!$R1 4942
1 TraesCS3D01G018900 chr3B 7072640 7077241 4601 False 2682.500000 3568 87.9575 1 4455 2 chr3B.!!$F4 4454
2 TraesCS3D01G018900 chr3A 13905507 13910097 4590 False 1644.666667 2488 85.8390 334 4451 3 chr3A.!!$F2 4117
3 TraesCS3D01G018900 chr7B 27764736 27765275 539 True 701.000000 701 90.9590 1693 2204 1 chr7B.!!$R1 511
4 TraesCS3D01G018900 chr1A 191561884 191562567 683 False 454.000000 621 91.9705 1570 2204 2 chr1A.!!$F1 634
5 TraesCS3D01G018900 chr1B 20119257 20119804 547 True 367.000000 617 93.0835 1707 2204 2 chr1B.!!$R1 497
6 TraesCS3D01G018900 chr6A 204399181 204399798 617 False 417.500000 532 92.8720 1570 2138 2 chr6A.!!$F2 568

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
111 121 0.031616 AAGGGAGGAAGAGATCGCCT 60.032 55.0 0.00 0.0 33.97 5.52 F
761 1080 0.173029 ACGTACGCGAGAGAGAGAGA 59.827 55.0 15.93 0.0 42.00 3.10 F
765 1084 0.179084 ACGCGAGAGAGAGAGAGAGG 60.179 60.0 15.93 0.0 33.96 3.69 F
2449 3153 0.670239 CCCAAAGCCATTGCGGAAAC 60.670 55.0 0.00 0.0 44.33 2.78 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1951 2395 1.047801 GGGTTTGGGCTTGACAACAT 58.952 50.000 0.00 0.0 0.00 2.71 R
2692 3401 0.325296 ACGAGGTCCAGGCAAGGATA 60.325 55.000 1.91 0.0 40.42 2.59 R
2741 3450 5.794894 TCTGTGGGAAAAGATACAAGAGAC 58.205 41.667 0.00 0.0 0.00 3.36 R
4155 4881 0.676184 AACGCAGCAGTGAGAAGAGA 59.324 50.000 0.00 0.0 0.00 3.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.349067 AGGGGTCGTTTCAGCTAACT 58.651 50.000 0.00 0.00 0.00 2.24
22 23 2.490991 GGGTCGTTTCAGCTAACTTGT 58.509 47.619 0.00 0.00 0.00 3.16
55 60 4.317698 GCAAAGCGATAGAGACTCAATTCG 60.318 45.833 5.02 10.64 39.76 3.34
63 68 6.416455 CGATAGAGACTCAATTCGAAAAGAGG 59.584 42.308 24.91 13.01 39.76 3.69
64 69 4.826556 AGAGACTCAATTCGAAAAGAGGG 58.173 43.478 24.91 10.27 32.52 4.30
71 76 6.546034 ACTCAATTCGAAAAGAGGGAGAAAAA 59.454 34.615 24.91 0.00 32.52 1.94
72 77 6.970484 TCAATTCGAAAAGAGGGAGAAAAAG 58.030 36.000 0.00 0.00 0.00 2.27
73 78 5.966742 ATTCGAAAAGAGGGAGAAAAAGG 57.033 39.130 0.00 0.00 0.00 3.11
74 79 4.699925 TCGAAAAGAGGGAGAAAAAGGA 57.300 40.909 0.00 0.00 0.00 3.36
76 81 3.753797 CGAAAAGAGGGAGAAAAAGGAGG 59.246 47.826 0.00 0.00 0.00 4.30
80 85 0.701147 AGGGAGAAAAAGGAGGCAGG 59.299 55.000 0.00 0.00 0.00 4.85
89 99 0.838987 AAGGAGGCAGGGTTTCGGTA 60.839 55.000 0.00 0.00 0.00 4.02
99 109 1.065636 GGGTTTCGGTAGAAAGGGAGG 60.066 57.143 0.00 0.00 45.92 4.30
111 121 0.031616 AAGGGAGGAAGAGATCGCCT 60.032 55.000 0.00 0.00 33.97 5.52
113 123 0.963225 GGGAGGAAGAGATCGCCTAC 59.037 60.000 0.00 0.00 30.70 3.18
114 124 1.693627 GGAGGAAGAGATCGCCTACA 58.306 55.000 0.00 0.00 32.66 2.74
115 125 1.338655 GGAGGAAGAGATCGCCTACAC 59.661 57.143 0.00 0.00 32.66 2.90
116 126 2.303175 GAGGAAGAGATCGCCTACACT 58.697 52.381 0.00 0.00 30.70 3.55
117 127 3.478509 GAGGAAGAGATCGCCTACACTA 58.521 50.000 0.00 0.00 30.70 2.74
118 128 3.482436 AGGAAGAGATCGCCTACACTAG 58.518 50.000 0.00 0.00 0.00 2.57
119 129 3.117813 AGGAAGAGATCGCCTACACTAGT 60.118 47.826 0.00 0.00 0.00 2.57
120 130 4.102838 AGGAAGAGATCGCCTACACTAGTA 59.897 45.833 0.00 0.00 0.00 1.82
121 131 4.453136 GGAAGAGATCGCCTACACTAGTAG 59.547 50.000 0.00 0.00 45.90 2.57
165 175 1.628846 ACATTAGGCCGAGGAACAACT 59.371 47.619 0.00 0.00 0.00 3.16
206 218 9.953825 CTTAGTTACACTAATTAAGCAAAGACG 57.046 33.333 0.00 0.00 39.68 4.18
211 223 5.922544 ACACTAATTAAGCAAAGACGTACGT 59.077 36.000 23.04 23.04 0.00 3.57
214 226 7.272084 CACTAATTAAGCAAAGACGTACGTACT 59.728 37.037 22.87 16.69 0.00 2.73
231 247 0.948623 ACTTACGTCAATGCTGCGCA 60.949 50.000 10.98 10.98 44.86 6.09
256 272 1.005394 CGGGACAAACACTAGCGGT 60.005 57.895 0.00 0.00 0.00 5.68
313 335 9.723447 AAAAACTAAAATTAAAATTTGCACCCG 57.277 25.926 1.61 0.00 38.53 5.28
314 336 7.428282 AACTAAAATTAAAATTTGCACCCGG 57.572 32.000 0.00 0.00 38.53 5.73
315 337 5.935206 ACTAAAATTAAAATTTGCACCCGGG 59.065 36.000 22.25 22.25 38.53 5.73
316 338 2.394930 ATTAAAATTTGCACCCGGGC 57.605 45.000 24.08 8.36 0.00 6.13
331 378 2.202974 GGCCCCACGACGATAACC 60.203 66.667 0.00 0.00 0.00 2.85
332 379 2.728435 GGCCCCACGACGATAACCT 61.728 63.158 0.00 0.00 0.00 3.50
391 456 1.345112 CCTAATCCCCACCACCTACCT 60.345 57.143 0.00 0.00 0.00 3.08
396 461 1.081462 CCCACCACCTACCTACCCA 59.919 63.158 0.00 0.00 0.00 4.51
398 463 1.269703 CCACCACCTACCTACCCACC 61.270 65.000 0.00 0.00 0.00 4.61
584 686 3.941188 CCCTGCCACCACTGACGT 61.941 66.667 0.00 0.00 0.00 4.34
590 692 4.602259 CACCACTGACGTGCGGGT 62.602 66.667 0.00 0.00 39.86 5.28
593 695 4.293648 CACTGACGTGCGGGTCCA 62.294 66.667 0.00 0.00 36.07 4.02
594 696 3.311110 ACTGACGTGCGGGTCCAT 61.311 61.111 0.00 0.00 36.07 3.41
595 697 2.047274 CTGACGTGCGGGTCCATT 60.047 61.111 0.00 0.00 36.07 3.16
597 699 2.818274 GACGTGCGGGTCCATTCC 60.818 66.667 0.00 0.00 0.00 3.01
621 723 4.504596 GCCGGCATGTCATGGGGA 62.505 66.667 24.80 0.00 0.00 4.81
755 877 1.392853 GAGAGAAACGTACGCGAGAGA 59.607 52.381 15.93 0.00 42.00 3.10
761 1080 0.173029 ACGTACGCGAGAGAGAGAGA 59.827 55.000 15.93 0.00 42.00 3.10
762 1081 0.850217 CGTACGCGAGAGAGAGAGAG 59.150 60.000 15.93 0.00 41.33 3.20
763 1082 1.534385 CGTACGCGAGAGAGAGAGAGA 60.534 57.143 15.93 0.00 41.33 3.10
764 1083 2.124903 GTACGCGAGAGAGAGAGAGAG 58.875 57.143 15.93 0.00 33.96 3.20
765 1084 0.179084 ACGCGAGAGAGAGAGAGAGG 60.179 60.000 15.93 0.00 33.96 3.69
766 1085 1.498865 CGCGAGAGAGAGAGAGAGGC 61.499 65.000 0.00 0.00 0.00 4.70
975 1362 4.834453 CAGCTCCCGCCTGCTCTG 62.834 72.222 0.00 0.00 37.44 3.35
978 1365 4.527583 CTCCCGCCTGCTCTGCTC 62.528 72.222 0.00 0.00 0.00 4.26
1557 1950 3.319122 AGCACAATCAGTTTGGGAAGTTC 59.681 43.478 0.00 0.00 41.60 3.01
1645 2041 1.070821 TCTTCAATTGTCGAGCTGCG 58.929 50.000 5.13 0.00 42.69 5.18
1712 2109 5.163754 CCCGGAATTAAATCTGTCTTGTGAC 60.164 44.000 0.73 0.00 43.20 3.67
1770 2168 9.314321 GCTGTCACATTGTACAATTACTAGTAT 57.686 33.333 18.50 0.00 0.00 2.12
1806 2246 8.668510 ATTATCTATGTTTGGCTGACTTGTAG 57.331 34.615 0.00 0.00 0.00 2.74
1951 2395 1.985473 ATTGCTGTGTTCCTGCTTCA 58.015 45.000 0.00 0.00 38.70 3.02
2146 2602 7.436970 TGCATTCATGTTTCATTTATGCTGATC 59.563 33.333 18.02 0.00 38.13 2.92
2274 2733 7.068593 TGAGAAATGAATCTTGTGTGTTTCCTT 59.931 33.333 0.00 0.00 0.00 3.36
2275 2734 7.428826 AGAAATGAATCTTGTGTGTTTCCTTC 58.571 34.615 0.00 0.00 0.00 3.46
2276 2735 6.713762 AATGAATCTTGTGTGTTTCCTTCA 57.286 33.333 0.00 0.00 0.00 3.02
2277 2736 5.756195 TGAATCTTGTGTGTTTCCTTCAG 57.244 39.130 0.00 0.00 0.00 3.02
2282 2741 1.226746 GTGTGTTTCCTTCAGTCCCG 58.773 55.000 0.00 0.00 0.00 5.14
2343 2802 4.533815 AGCAAACATGACTGATGGATCAT 58.466 39.130 0.00 0.00 36.23 2.45
2393 3074 3.555966 CTGAGAGTCCCCTTTTGTGTTT 58.444 45.455 0.00 0.00 0.00 2.83
2413 3094 2.348472 TCTTCCTCCCAAAGTGGTCAT 58.652 47.619 0.00 0.00 35.17 3.06
2437 3141 1.467920 CCACATCTTCCTCCCAAAGC 58.532 55.000 0.00 0.00 0.00 3.51
2449 3153 0.670239 CCCAAAGCCATTGCGGAAAC 60.670 55.000 0.00 0.00 44.33 2.78
2512 3217 8.934507 AGATTCACTGCATACTTAGAAGTTAC 57.065 34.615 0.00 0.00 40.37 2.50
2524 3229 3.380479 AGAAGTTACGTGCTGCTGTTA 57.620 42.857 0.00 0.00 0.00 2.41
2531 3236 1.341531 ACGTGCTGCTGTTACTCTCTT 59.658 47.619 0.00 0.00 0.00 2.85
2557 3262 6.611642 ACTCATATACTTGTTCCCTAGCTTGA 59.388 38.462 0.00 0.00 0.00 3.02
2560 3265 1.002087 ACTTGTTCCCTAGCTTGACCG 59.998 52.381 0.00 0.00 0.00 4.79
2566 3271 2.463752 TCCCTAGCTTGACCGTAATGT 58.536 47.619 0.00 0.00 0.00 2.71
2567 3272 3.634504 TCCCTAGCTTGACCGTAATGTA 58.365 45.455 0.00 0.00 0.00 2.29
2568 3273 3.382546 TCCCTAGCTTGACCGTAATGTAC 59.617 47.826 0.00 0.00 0.00 2.90
2569 3274 3.383825 CCCTAGCTTGACCGTAATGTACT 59.616 47.826 0.00 0.00 0.00 2.73
2570 3275 4.360563 CCTAGCTTGACCGTAATGTACTG 58.639 47.826 0.00 0.00 0.00 2.74
2578 3283 6.330004 TGACCGTAATGTACTGTACTTCAA 57.670 37.500 17.98 0.00 0.00 2.69
2611 3316 4.947388 TGGGGTTAGCTTGCTTTAACATAG 59.053 41.667 0.00 0.00 32.68 2.23
2679 3388 8.900781 TCACATAGTACAGTAAGTAGAATGTCC 58.099 37.037 0.00 0.00 37.24 4.02
2683 3392 7.719871 AGTACAGTAAGTAGAATGTCCACAT 57.280 36.000 0.00 0.00 33.66 3.21
2687 3396 7.548097 ACAGTAAGTAGAATGTCCACATACTG 58.452 38.462 13.77 13.77 44.23 2.74
2692 3401 4.292186 AGAATGTCCACATACTGCAGTT 57.708 40.909 27.06 10.22 35.10 3.16
2710 3419 0.830648 TTATCCTTGCCTGGACCTCG 59.169 55.000 0.00 0.00 39.17 4.63
2722 3431 5.063880 GCCTGGACCTCGTCATATATTTTT 58.936 41.667 0.00 0.00 33.68 1.94
2753 3462 9.607988 CTCATATACGATAGGTCTCTTGTATCT 57.392 37.037 0.00 0.00 43.77 1.98
2759 3468 6.183360 ACGATAGGTCTCTTGTATCTTTTCCC 60.183 42.308 0.00 0.00 43.77 3.97
2760 3469 6.183360 CGATAGGTCTCTTGTATCTTTTCCCA 60.183 42.308 0.00 0.00 0.00 4.37
2762 3471 4.597507 AGGTCTCTTGTATCTTTTCCCACA 59.402 41.667 0.00 0.00 0.00 4.17
2806 3515 4.281688 AGCCCCAACATGCATATGTAATTC 59.718 41.667 0.00 0.00 46.54 2.17
2811 3520 5.535783 CCAACATGCATATGTAATTCTCCCA 59.464 40.000 0.00 0.00 46.54 4.37
2812 3521 6.294342 CCAACATGCATATGTAATTCTCCCAG 60.294 42.308 0.00 0.00 46.54 4.45
2818 3529 5.703130 GCATATGTAATTCTCCCAGACCTTC 59.297 44.000 4.29 0.00 0.00 3.46
2823 3534 0.793617 TTCTCCCAGACCTTCCTCCT 59.206 55.000 0.00 0.00 0.00 3.69
2825 3536 1.000486 TCCCAGACCTTCCTCCTCG 60.000 63.158 0.00 0.00 0.00 4.63
2827 3538 0.033405 CCCAGACCTTCCTCCTCGTA 60.033 60.000 0.00 0.00 0.00 3.43
2853 3564 8.299990 TCTTATTCTCTCTTTCCTAAGTCCTG 57.700 38.462 0.00 0.00 32.98 3.86
2854 3565 7.896496 TCTTATTCTCTCTTTCCTAAGTCCTGT 59.104 37.037 0.00 0.00 32.98 4.00
2875 3586 5.003160 TGTTGAACCCACACTATTGATCTG 58.997 41.667 0.00 0.00 0.00 2.90
2876 3587 3.609853 TGAACCCACACTATTGATCTGC 58.390 45.455 0.00 0.00 0.00 4.26
2878 3589 0.940126 CCCACACTATTGATCTGCGC 59.060 55.000 0.00 0.00 0.00 6.09
2886 3597 3.758554 ACTATTGATCTGCGCTTGGTTTT 59.241 39.130 9.73 0.00 0.00 2.43
2899 3612 4.616802 CGCTTGGTTTTGTTATGTTGCTAG 59.383 41.667 0.00 0.00 0.00 3.42
2901 3614 5.461032 TTGGTTTTGTTATGTTGCTAGGG 57.539 39.130 0.00 0.00 0.00 3.53
2904 3617 4.521256 GGTTTTGTTATGTTGCTAGGGTGA 59.479 41.667 0.00 0.00 0.00 4.02
2908 3621 8.301002 GTTTTGTTATGTTGCTAGGGTGATTTA 58.699 33.333 0.00 0.00 0.00 1.40
2910 3623 7.624360 TGTTATGTTGCTAGGGTGATTTAAG 57.376 36.000 0.00 0.00 0.00 1.85
2987 3704 1.980844 CTTTGCGCATGTGTGAATGTC 59.019 47.619 12.75 0.00 0.00 3.06
3000 3717 5.821995 TGTGTGAATGTCTCAACTGATGAAA 59.178 36.000 0.00 0.00 37.67 2.69
3025 3742 7.630082 ACTTTATGGTAGTTAATGGAGCTTGA 58.370 34.615 0.00 0.00 0.00 3.02
3029 3747 3.623510 GGTAGTTAATGGAGCTTGAGTGC 59.376 47.826 0.00 0.00 0.00 4.40
3039 3757 1.001860 AGCTTGAGTGCTCCTGACTTC 59.998 52.381 0.00 0.00 39.34 3.01
3058 3776 7.556844 TGACTTCTCTGGTATTTATGGTCTTC 58.443 38.462 0.00 0.00 0.00 2.87
3158 3876 8.643324 ACTAGTGATATTGGATGGAAAGAGTAC 58.357 37.037 0.00 0.00 0.00 2.73
3311 4030 0.673644 AATCCACAGAGAAACGGGCG 60.674 55.000 0.00 0.00 0.00 6.13
3372 4094 1.574263 ACCTCTGCTTCTACTTCCCC 58.426 55.000 0.00 0.00 0.00 4.81
3374 4096 1.187087 CTCTGCTTCTACTTCCCCGT 58.813 55.000 0.00 0.00 0.00 5.28
3387 4109 1.079336 CCCCGTCCTTCCTTTCGAC 60.079 63.158 0.00 0.00 0.00 4.20
3391 4113 1.541670 CCGTCCTTCCTTTCGACCAAA 60.542 52.381 0.00 0.00 0.00 3.28
3394 4116 3.370061 CGTCCTTCCTTTCGACCAAATAC 59.630 47.826 0.00 0.00 0.00 1.89
3398 4120 6.016527 GTCCTTCCTTTCGACCAAATACTTTT 60.017 38.462 0.00 0.00 0.00 2.27
3816 4542 1.280421 GGCAGGAAGAGATGGTTCAGT 59.720 52.381 0.00 0.00 0.00 3.41
3825 4551 3.779183 AGAGATGGTTCAGTGATCCATGT 59.221 43.478 31.55 28.44 40.81 3.21
4011 4737 2.674852 TCTCATTTTGCACAGATCGAGC 59.325 45.455 0.00 0.00 0.00 5.03
4141 4867 6.683974 TTCAGAGATATTTTTGGTAGCTGC 57.316 37.500 0.00 0.00 0.00 5.25
4150 4876 1.825090 TTGGTAGCTGCCATGACTTG 58.175 50.000 25.10 0.00 38.48 3.16
4155 4881 0.403271 AGCTGCCATGACTTGAAGGT 59.597 50.000 0.00 0.00 0.00 3.50
4160 4886 2.373169 TGCCATGACTTGAAGGTCTCTT 59.627 45.455 0.00 0.00 37.16 2.85
4172 4898 0.735632 GGTCTCTTCTCACTGCTGCG 60.736 60.000 0.00 0.00 0.00 5.18
4177 4903 1.501337 CTTCTCACTGCTGCGTTGCA 61.501 55.000 4.58 4.58 41.05 4.08
4208 4934 2.044551 GGAGGCCAGGGAGCTTTG 60.045 66.667 5.01 0.00 0.00 2.77
4337 5071 7.863468 TCCCATACGGAATTGAATCGAGAGAA 61.863 42.308 0.00 0.00 40.48 2.87
4384 5122 3.643199 ATTTTGTTGGCCTTGTGGTTT 57.357 38.095 3.32 0.00 35.27 3.27
4420 5158 2.766313 TGTGCTTAACAGAACGCTCAT 58.234 42.857 0.00 0.00 33.78 2.90
4421 5159 2.480037 TGTGCTTAACAGAACGCTCATG 59.520 45.455 0.00 0.00 33.78 3.07
4426 5166 4.556699 GCTTAACAGAACGCTCATGGTTTT 60.557 41.667 0.00 0.00 0.00 2.43
4467 5207 2.937591 CAGAATGCAACCACATGTGAC 58.062 47.619 27.46 13.33 0.00 3.67
4468 5208 1.536766 AGAATGCAACCACATGTGACG 59.463 47.619 27.46 13.68 0.00 4.35
4469 5209 1.266718 GAATGCAACCACATGTGACGT 59.733 47.619 27.46 14.37 0.00 4.34
4470 5210 0.874390 ATGCAACCACATGTGACGTC 59.126 50.000 27.46 9.11 0.00 4.34
4471 5211 0.179059 TGCAACCACATGTGACGTCT 60.179 50.000 27.46 3.51 0.00 4.18
4472 5212 0.235665 GCAACCACATGTGACGTCTG 59.764 55.000 27.46 15.66 0.00 3.51
4473 5213 1.864565 CAACCACATGTGACGTCTGA 58.135 50.000 27.46 3.14 0.00 3.27
4474 5214 2.416747 CAACCACATGTGACGTCTGAT 58.583 47.619 27.46 5.59 0.00 2.90
4475 5215 2.807967 CAACCACATGTGACGTCTGATT 59.192 45.455 27.46 0.00 0.00 2.57
4476 5216 3.126001 ACCACATGTGACGTCTGATTT 57.874 42.857 27.46 0.00 0.00 2.17
4477 5217 4.265904 ACCACATGTGACGTCTGATTTA 57.734 40.909 27.46 0.00 0.00 1.40
4478 5218 4.832248 ACCACATGTGACGTCTGATTTAT 58.168 39.130 27.46 0.00 0.00 1.40
4479 5219 4.870426 ACCACATGTGACGTCTGATTTATC 59.130 41.667 27.46 0.00 0.00 1.75
4480 5220 5.111989 CCACATGTGACGTCTGATTTATCT 58.888 41.667 27.46 0.00 0.00 1.98
4481 5221 5.582269 CCACATGTGACGTCTGATTTATCTT 59.418 40.000 27.46 0.00 0.00 2.40
4482 5222 6.756542 CCACATGTGACGTCTGATTTATCTTA 59.243 38.462 27.46 0.00 0.00 2.10
4483 5223 7.439356 CCACATGTGACGTCTGATTTATCTTAT 59.561 37.037 27.46 0.00 0.00 1.73
4484 5224 8.483218 CACATGTGACGTCTGATTTATCTTATC 58.517 37.037 21.64 0.00 0.00 1.75
4485 5225 7.653713 ACATGTGACGTCTGATTTATCTTATCC 59.346 37.037 17.92 0.00 0.00 2.59
4486 5226 7.107639 TGTGACGTCTGATTTATCTTATCCA 57.892 36.000 17.92 0.00 0.00 3.41
4487 5227 7.203218 TGTGACGTCTGATTTATCTTATCCAG 58.797 38.462 17.92 0.00 0.00 3.86
4488 5228 7.147897 TGTGACGTCTGATTTATCTTATCCAGT 60.148 37.037 17.92 0.00 0.00 4.00
4489 5229 7.380065 GTGACGTCTGATTTATCTTATCCAGTC 59.620 40.741 17.92 0.00 0.00 3.51
4490 5230 7.285629 TGACGTCTGATTTATCTTATCCAGTCT 59.714 37.037 17.92 0.00 0.00 3.24
4491 5231 8.693120 ACGTCTGATTTATCTTATCCAGTCTA 57.307 34.615 0.00 0.00 0.00 2.59
4492 5232 9.132923 ACGTCTGATTTATCTTATCCAGTCTAA 57.867 33.333 0.00 0.00 0.00 2.10
4508 5248 9.907229 ATCCAGTCTAATATGTCTATACATCGA 57.093 33.333 0.00 0.00 42.92 3.59
4509 5249 9.907229 TCCAGTCTAATATGTCTATACATCGAT 57.093 33.333 0.00 0.00 42.92 3.59
4510 5250 9.943163 CCAGTCTAATATGTCTATACATCGATG 57.057 37.037 23.68 23.68 42.92 3.84
4511 5251 9.943163 CAGTCTAATATGTCTATACATCGATGG 57.057 37.037 28.09 11.33 42.92 3.51
4512 5252 8.625651 AGTCTAATATGTCTATACATCGATGGC 58.374 37.037 28.09 11.64 42.92 4.40
4513 5253 8.625651 GTCTAATATGTCTATACATCGATGGCT 58.374 37.037 28.09 17.03 42.92 4.75
4514 5254 8.624776 TCTAATATGTCTATACATCGATGGCTG 58.375 37.037 28.09 15.11 42.92 4.85
4515 5255 3.303881 TGTCTATACATCGATGGCTGC 57.696 47.619 28.09 13.53 0.00 5.25
4516 5256 2.627699 TGTCTATACATCGATGGCTGCA 59.372 45.455 28.09 15.69 0.00 4.41
4517 5257 3.259123 TGTCTATACATCGATGGCTGCAT 59.741 43.478 28.09 14.83 0.00 3.96
4518 5258 3.615937 GTCTATACATCGATGGCTGCATG 59.384 47.826 28.09 11.78 0.00 4.06
4519 5259 1.162698 ATACATCGATGGCTGCATGC 58.837 50.000 28.09 11.82 41.94 4.06
4520 5260 0.179051 TACATCGATGGCTGCATGCA 60.179 50.000 28.09 21.29 45.15 3.96
4521 5261 0.822121 ACATCGATGGCTGCATGCAT 60.822 50.000 28.09 5.92 45.15 3.96
4522 5262 0.109735 CATCGATGGCTGCATGCATC 60.110 55.000 22.97 17.75 45.15 3.91
4523 5263 1.574702 ATCGATGGCTGCATGCATCG 61.575 55.000 27.34 27.34 45.18 3.84
4524 5264 2.540228 CGATGGCTGCATGCATCGT 61.540 57.895 25.75 19.88 45.15 3.73
4525 5265 1.281960 GATGGCTGCATGCATCGTC 59.718 57.895 22.97 21.28 45.15 4.20
4526 5266 1.153025 ATGGCTGCATGCATCGTCT 60.153 52.632 22.97 1.97 45.15 4.18
4527 5267 0.107268 ATGGCTGCATGCATCGTCTA 59.893 50.000 22.97 9.19 45.15 2.59
4528 5268 0.531311 TGGCTGCATGCATCGTCTAG 60.531 55.000 22.97 8.76 45.15 2.43
4529 5269 0.249615 GGCTGCATGCATCGTCTAGA 60.250 55.000 22.97 0.00 45.15 2.43
4530 5270 1.607509 GGCTGCATGCATCGTCTAGAT 60.608 52.381 22.97 0.00 45.15 1.98
4539 5279 2.810439 ATCGTCTAGATGCAGAAGCC 57.190 50.000 7.11 0.00 41.13 4.35
4540 5280 0.382158 TCGTCTAGATGCAGAAGCCG 59.618 55.000 7.11 0.00 41.13 5.52
4541 5281 0.596083 CGTCTAGATGCAGAAGCCGG 60.596 60.000 0.00 0.00 41.13 6.13
4542 5282 0.249657 GTCTAGATGCAGAAGCCGGG 60.250 60.000 2.18 0.00 41.13 5.73
4543 5283 1.070445 CTAGATGCAGAAGCCGGGG 59.930 63.158 2.18 0.00 41.13 5.73
4544 5284 2.388890 CTAGATGCAGAAGCCGGGGG 62.389 65.000 2.18 0.00 41.13 5.40
4545 5285 4.115199 GATGCAGAAGCCGGGGGT 62.115 66.667 2.18 0.00 41.13 4.95
4546 5286 3.645268 GATGCAGAAGCCGGGGGTT 62.645 63.158 2.18 1.04 41.13 4.11
4547 5287 3.224007 ATGCAGAAGCCGGGGGTTT 62.224 57.895 2.18 0.00 41.13 3.27
4548 5288 1.858739 ATGCAGAAGCCGGGGGTTTA 61.859 55.000 2.18 0.00 41.13 2.01
4549 5289 1.076995 GCAGAAGCCGGGGGTTTAT 60.077 57.895 2.18 0.00 35.84 1.40
4550 5290 1.101635 GCAGAAGCCGGGGGTTTATC 61.102 60.000 2.18 0.00 35.84 1.75
4551 5291 0.465642 CAGAAGCCGGGGGTTTATCC 60.466 60.000 2.18 0.00 35.84 2.59
4552 5292 0.623617 AGAAGCCGGGGGTTTATCCT 60.624 55.000 2.18 0.00 35.84 3.24
4553 5293 0.179026 GAAGCCGGGGGTTTATCCTC 60.179 60.000 2.18 0.00 35.84 3.71
4561 5301 3.750501 GGGGTTTATCCTCCTTTTCCA 57.249 47.619 0.00 0.00 36.25 3.53
4562 5302 4.055710 GGGGTTTATCCTCCTTTTCCAA 57.944 45.455 0.00 0.00 36.25 3.53
4563 5303 4.422057 GGGGTTTATCCTCCTTTTCCAAA 58.578 43.478 0.00 0.00 36.25 3.28
4564 5304 4.841813 GGGGTTTATCCTCCTTTTCCAAAA 59.158 41.667 0.00 0.00 36.25 2.44
4565 5305 5.308497 GGGGTTTATCCTCCTTTTCCAAAAA 59.692 40.000 0.00 0.00 36.25 1.94
4609 5349 8.990693 AGGATTATTATTATCAGGTGTAGGGT 57.009 34.615 0.00 0.00 0.00 4.34
4610 5350 9.406662 AGGATTATTATTATCAGGTGTAGGGTT 57.593 33.333 0.00 0.00 0.00 4.11
4611 5351 9.449719 GGATTATTATTATCAGGTGTAGGGTTG 57.550 37.037 0.00 0.00 0.00 3.77
4615 5355 8.792830 ATTATTATCAGGTGTAGGGTTGTAGA 57.207 34.615 0.00 0.00 0.00 2.59
4616 5356 8.612486 TTATTATCAGGTGTAGGGTTGTAGAA 57.388 34.615 0.00 0.00 0.00 2.10
4617 5357 6.938698 TTATCAGGTGTAGGGTTGTAGAAA 57.061 37.500 0.00 0.00 0.00 2.52
4618 5358 4.884668 TCAGGTGTAGGGTTGTAGAAAG 57.115 45.455 0.00 0.00 0.00 2.62
4619 5359 4.485875 TCAGGTGTAGGGTTGTAGAAAGA 58.514 43.478 0.00 0.00 0.00 2.52
4620 5360 4.527038 TCAGGTGTAGGGTTGTAGAAAGAG 59.473 45.833 0.00 0.00 0.00 2.85
4621 5361 4.283722 CAGGTGTAGGGTTGTAGAAAGAGT 59.716 45.833 0.00 0.00 0.00 3.24
4622 5362 4.283722 AGGTGTAGGGTTGTAGAAAGAGTG 59.716 45.833 0.00 0.00 0.00 3.51
4623 5363 4.562963 GGTGTAGGGTTGTAGAAAGAGTGG 60.563 50.000 0.00 0.00 0.00 4.00
4624 5364 4.040095 GTGTAGGGTTGTAGAAAGAGTGGT 59.960 45.833 0.00 0.00 0.00 4.16
4625 5365 4.657039 TGTAGGGTTGTAGAAAGAGTGGTT 59.343 41.667 0.00 0.00 0.00 3.67
4626 5366 5.840149 TGTAGGGTTGTAGAAAGAGTGGTTA 59.160 40.000 0.00 0.00 0.00 2.85
4627 5367 5.224821 AGGGTTGTAGAAAGAGTGGTTAC 57.775 43.478 0.00 0.00 0.00 2.50
4628 5368 4.041321 AGGGTTGTAGAAAGAGTGGTTACC 59.959 45.833 0.00 0.00 0.00 2.85
4629 5369 4.321718 GGTTGTAGAAAGAGTGGTTACCC 58.678 47.826 0.00 0.00 0.00 3.69
4630 5370 4.202388 GGTTGTAGAAAGAGTGGTTACCCA 60.202 45.833 0.00 0.00 38.87 4.51
4631 5371 4.884668 TGTAGAAAGAGTGGTTACCCAG 57.115 45.455 0.00 0.00 42.94 4.45
4632 5372 2.861147 AGAAAGAGTGGTTACCCAGC 57.139 50.000 0.00 0.00 42.94 4.85
4633 5373 1.351350 AGAAAGAGTGGTTACCCAGCC 59.649 52.381 0.00 0.00 42.94 4.85
4634 5374 1.351350 GAAAGAGTGGTTACCCAGCCT 59.649 52.381 0.00 0.00 42.94 4.58
4635 5375 0.984995 AAGAGTGGTTACCCAGCCTC 59.015 55.000 0.00 0.00 42.94 4.70
4636 5376 1.218316 GAGTGGTTACCCAGCCTCG 59.782 63.158 0.00 0.00 42.94 4.63
4637 5377 2.436115 GTGGTTACCCAGCCTCGC 60.436 66.667 0.00 0.00 42.94 5.03
4638 5378 2.606519 TGGTTACCCAGCCTCGCT 60.607 61.111 0.00 0.00 40.77 4.93
4649 5389 3.926003 CCTCGCTGGCTCTGACTA 58.074 61.111 0.00 0.00 0.00 2.59
4650 5390 1.732917 CCTCGCTGGCTCTGACTAG 59.267 63.158 0.00 0.00 0.00 2.57
4651 5391 0.749818 CCTCGCTGGCTCTGACTAGA 60.750 60.000 0.00 0.00 0.00 2.43
4652 5392 1.098869 CTCGCTGGCTCTGACTAGAA 58.901 55.000 0.00 0.00 31.21 2.10
4653 5393 1.680735 CTCGCTGGCTCTGACTAGAAT 59.319 52.381 0.00 0.00 31.21 2.40
4654 5394 1.678627 TCGCTGGCTCTGACTAGAATC 59.321 52.381 0.00 0.00 31.21 2.52
4655 5395 1.680735 CGCTGGCTCTGACTAGAATCT 59.319 52.381 0.00 0.00 31.21 2.40
4656 5396 2.543445 CGCTGGCTCTGACTAGAATCTG 60.543 54.545 0.00 0.00 31.21 2.90
4657 5397 2.430332 GCTGGCTCTGACTAGAATCTGT 59.570 50.000 0.00 0.00 31.21 3.41
4658 5398 3.118811 GCTGGCTCTGACTAGAATCTGTT 60.119 47.826 0.00 0.00 31.21 3.16
4659 5399 4.622695 GCTGGCTCTGACTAGAATCTGTTT 60.623 45.833 0.00 0.00 31.21 2.83
4660 5400 5.078411 TGGCTCTGACTAGAATCTGTTTC 57.922 43.478 0.00 0.00 31.21 2.78
4661 5401 4.109050 GGCTCTGACTAGAATCTGTTTCG 58.891 47.826 0.00 0.00 39.46 3.46
4662 5402 4.142359 GGCTCTGACTAGAATCTGTTTCGA 60.142 45.833 0.00 0.00 39.46 3.71
4663 5403 5.451242 GGCTCTGACTAGAATCTGTTTCGAT 60.451 44.000 0.00 0.00 39.46 3.59
4664 5404 6.039616 GCTCTGACTAGAATCTGTTTCGATT 58.960 40.000 0.00 0.00 39.46 3.34
4665 5405 6.533367 GCTCTGACTAGAATCTGTTTCGATTT 59.467 38.462 0.00 0.00 39.46 2.17
4666 5406 7.463913 GCTCTGACTAGAATCTGTTTCGATTTG 60.464 40.741 0.00 0.00 39.46 2.32
4667 5407 6.813649 TCTGACTAGAATCTGTTTCGATTTGG 59.186 38.462 0.00 0.00 39.46 3.28
4668 5408 6.464222 TGACTAGAATCTGTTTCGATTTGGT 58.536 36.000 0.00 0.00 39.46 3.67
4669 5409 6.934645 TGACTAGAATCTGTTTCGATTTGGTT 59.065 34.615 0.00 0.00 39.46 3.67
4670 5410 7.444183 TGACTAGAATCTGTTTCGATTTGGTTT 59.556 33.333 0.00 0.00 39.46 3.27
4671 5411 7.584987 ACTAGAATCTGTTTCGATTTGGTTTG 58.415 34.615 0.00 0.00 39.46 2.93
4672 5412 5.772521 AGAATCTGTTTCGATTTGGTTTGG 58.227 37.500 0.00 0.00 39.46 3.28
4673 5413 5.534654 AGAATCTGTTTCGATTTGGTTTGGA 59.465 36.000 0.00 0.00 39.46 3.53
4674 5414 4.829064 TCTGTTTCGATTTGGTTTGGAG 57.171 40.909 0.00 0.00 0.00 3.86
4675 5415 3.568007 TCTGTTTCGATTTGGTTTGGAGG 59.432 43.478 0.00 0.00 0.00 4.30
4676 5416 2.625790 TGTTTCGATTTGGTTTGGAGGG 59.374 45.455 0.00 0.00 0.00 4.30
4677 5417 1.253100 TTCGATTTGGTTTGGAGGGC 58.747 50.000 0.00 0.00 0.00 5.19
4678 5418 0.958382 TCGATTTGGTTTGGAGGGCG 60.958 55.000 0.00 0.00 0.00 6.13
4679 5419 1.241315 CGATTTGGTTTGGAGGGCGT 61.241 55.000 0.00 0.00 0.00 5.68
4680 5420 0.243636 GATTTGGTTTGGAGGGCGTG 59.756 55.000 0.00 0.00 0.00 5.34
4681 5421 0.178975 ATTTGGTTTGGAGGGCGTGA 60.179 50.000 0.00 0.00 0.00 4.35
4682 5422 0.821711 TTTGGTTTGGAGGGCGTGAG 60.822 55.000 0.00 0.00 0.00 3.51
4683 5423 1.990160 TTGGTTTGGAGGGCGTGAGT 61.990 55.000 0.00 0.00 0.00 3.41
4684 5424 1.228154 GGTTTGGAGGGCGTGAGTT 60.228 57.895 0.00 0.00 0.00 3.01
4685 5425 0.035739 GGTTTGGAGGGCGTGAGTTA 59.964 55.000 0.00 0.00 0.00 2.24
4686 5426 1.439679 GTTTGGAGGGCGTGAGTTAG 58.560 55.000 0.00 0.00 0.00 2.34
4687 5427 1.053424 TTTGGAGGGCGTGAGTTAGT 58.947 50.000 0.00 0.00 0.00 2.24
4688 5428 1.053424 TTGGAGGGCGTGAGTTAGTT 58.947 50.000 0.00 0.00 0.00 2.24
4689 5429 0.606604 TGGAGGGCGTGAGTTAGTTC 59.393 55.000 0.00 0.00 0.00 3.01
4690 5430 0.108281 GGAGGGCGTGAGTTAGTTCC 60.108 60.000 0.00 0.00 0.00 3.62
4691 5431 0.458025 GAGGGCGTGAGTTAGTTCCG 60.458 60.000 0.00 0.00 0.00 4.30
4692 5432 1.183676 AGGGCGTGAGTTAGTTCCGT 61.184 55.000 0.00 0.00 0.00 4.69
4693 5433 0.320160 GGGCGTGAGTTAGTTCCGTT 60.320 55.000 0.00 0.00 0.00 4.44
4694 5434 1.505425 GGCGTGAGTTAGTTCCGTTT 58.495 50.000 0.00 0.00 0.00 3.60
4695 5435 1.458445 GGCGTGAGTTAGTTCCGTTTC 59.542 52.381 0.00 0.00 0.00 2.78
4696 5436 2.129607 GCGTGAGTTAGTTCCGTTTCA 58.870 47.619 0.00 0.00 0.00 2.69
4697 5437 2.155155 GCGTGAGTTAGTTCCGTTTCAG 59.845 50.000 0.00 0.00 0.00 3.02
4698 5438 2.729882 CGTGAGTTAGTTCCGTTTCAGG 59.270 50.000 0.00 0.00 0.00 3.86
4699 5439 3.064931 GTGAGTTAGTTCCGTTTCAGGG 58.935 50.000 0.00 0.00 0.00 4.45
4700 5440 2.701951 TGAGTTAGTTCCGTTTCAGGGT 59.298 45.455 0.00 0.00 0.00 4.34
4701 5441 3.064931 GAGTTAGTTCCGTTTCAGGGTG 58.935 50.000 0.00 0.00 0.00 4.61
4702 5442 2.148768 GTTAGTTCCGTTTCAGGGTGG 58.851 52.381 0.00 0.00 0.00 4.61
4703 5443 0.688487 TAGTTCCGTTTCAGGGTGGG 59.312 55.000 0.00 0.00 0.00 4.61
4704 5444 1.057851 AGTTCCGTTTCAGGGTGGGA 61.058 55.000 0.00 0.00 0.00 4.37
4705 5445 0.179012 GTTCCGTTTCAGGGTGGGAA 60.179 55.000 0.00 0.00 34.56 3.97
4706 5446 0.774908 TTCCGTTTCAGGGTGGGAAT 59.225 50.000 0.00 0.00 32.12 3.01
4707 5447 0.037590 TCCGTTTCAGGGTGGGAATG 59.962 55.000 0.00 0.00 0.00 2.67
4708 5448 0.965363 CCGTTTCAGGGTGGGAATGG 60.965 60.000 0.00 0.00 0.00 3.16
4709 5449 0.965363 CGTTTCAGGGTGGGAATGGG 60.965 60.000 0.00 0.00 0.00 4.00
4710 5450 1.078347 TTTCAGGGTGGGAATGGGC 59.922 57.895 0.00 0.00 0.00 5.36
4711 5451 2.454459 TTTCAGGGTGGGAATGGGCC 62.454 60.000 0.00 0.00 0.00 5.80
4712 5452 4.820744 CAGGGTGGGAATGGGCCG 62.821 72.222 0.00 0.00 0.00 6.13
4716 5456 4.815108 GTGGGAATGGGCCGGGTC 62.815 72.222 2.18 0.00 0.00 4.46
4719 5459 4.851179 GGAATGGGCCGGGTCGAC 62.851 72.222 7.13 7.13 0.00 4.20
4720 5460 4.851179 GAATGGGCCGGGTCGACC 62.851 72.222 27.04 27.04 0.00 4.79
4743 5483 3.961414 GGTCTTTGGCCCGACCCA 61.961 66.667 19.89 0.00 43.05 4.51
4744 5484 2.114411 GTCTTTGGCCCGACCCAA 59.886 61.111 0.00 3.05 42.87 4.12
4764 5504 1.698506 AAAAACAAGGCCGATGGTCA 58.301 45.000 14.92 0.00 0.00 4.02
4765 5505 1.247567 AAAACAAGGCCGATGGTCAG 58.752 50.000 14.92 0.00 0.00 3.51
4766 5506 0.110486 AAACAAGGCCGATGGTCAGT 59.890 50.000 14.92 0.00 0.00 3.41
4767 5507 0.110486 AACAAGGCCGATGGTCAGTT 59.890 50.000 14.92 2.29 0.00 3.16
4768 5508 0.606401 ACAAGGCCGATGGTCAGTTG 60.606 55.000 14.92 5.43 0.00 3.16
4769 5509 1.002134 AAGGCCGATGGTCAGTTGG 60.002 57.895 0.00 0.00 0.00 3.77
4770 5510 2.438434 GGCCGATGGTCAGTTGGG 60.438 66.667 0.00 0.00 0.00 4.12
4771 5511 3.134127 GCCGATGGTCAGTTGGGC 61.134 66.667 0.00 0.00 0.00 5.36
4772 5512 2.438434 CCGATGGTCAGTTGGGCC 60.438 66.667 0.00 0.00 0.00 5.80
4773 5513 2.819595 CGATGGTCAGTTGGGCCG 60.820 66.667 0.00 0.00 0.00 6.13
4774 5514 2.438434 GATGGTCAGTTGGGCCGG 60.438 66.667 0.00 0.00 0.00 6.13
4775 5515 4.740822 ATGGTCAGTTGGGCCGGC 62.741 66.667 21.18 21.18 0.00 6.13
4778 5518 4.660938 GTCAGTTGGGCCGGCCTT 62.661 66.667 42.70 23.85 36.10 4.35
4779 5519 4.659172 TCAGTTGGGCCGGCCTTG 62.659 66.667 42.70 31.93 36.10 3.61
4780 5520 4.974721 CAGTTGGGCCGGCCTTGT 62.975 66.667 42.70 23.31 36.10 3.16
4781 5521 3.253838 AGTTGGGCCGGCCTTGTA 61.254 61.111 42.70 24.47 36.10 2.41
4782 5522 3.060000 GTTGGGCCGGCCTTGTAC 61.060 66.667 42.70 29.08 36.10 2.90
4783 5523 3.571216 TTGGGCCGGCCTTGTACA 61.571 61.111 42.70 29.44 36.10 2.90
4784 5524 3.134703 TTGGGCCGGCCTTGTACAA 62.135 57.895 42.70 32.96 36.10 2.41
4785 5525 2.282603 GGGCCGGCCTTGTACAAA 60.283 61.111 42.70 0.00 36.10 2.83
4786 5526 1.904378 GGGCCGGCCTTGTACAAAA 60.904 57.895 42.70 0.00 36.10 2.44
4787 5527 1.465200 GGGCCGGCCTTGTACAAAAA 61.465 55.000 42.70 0.00 36.10 1.94
4810 5550 4.082523 GCCAGTAGAGCCGGCACA 62.083 66.667 31.54 10.25 45.52 4.57
4811 5551 2.185350 CCAGTAGAGCCGGCACAG 59.815 66.667 31.54 15.01 0.00 3.66
4812 5552 2.351244 CCAGTAGAGCCGGCACAGA 61.351 63.158 31.54 12.12 0.00 3.41
4813 5553 1.140589 CAGTAGAGCCGGCACAGAG 59.859 63.158 31.54 9.94 0.00 3.35
4814 5554 1.304547 AGTAGAGCCGGCACAGAGT 60.305 57.895 31.54 14.55 0.00 3.24
4815 5555 1.153745 GTAGAGCCGGCACAGAGTG 60.154 63.158 31.54 0.00 36.51 3.51
4816 5556 1.304134 TAGAGCCGGCACAGAGTGA 60.304 57.895 31.54 1.01 35.23 3.41
4817 5557 1.595993 TAGAGCCGGCACAGAGTGAC 61.596 60.000 31.54 7.76 38.37 3.67
4818 5558 3.941657 GAGCCGGCACAGAGTGACC 62.942 68.421 31.54 0.00 38.55 4.02
4820 5560 3.625897 CCGGCACAGAGTGACCCA 61.626 66.667 0.58 0.00 38.55 4.51
4821 5561 2.665000 CGGCACAGAGTGACCCAT 59.335 61.111 0.58 0.00 38.55 4.00
4822 5562 1.003355 CGGCACAGAGTGACCCATT 60.003 57.895 0.58 0.00 38.55 3.16
4823 5563 1.300971 CGGCACAGAGTGACCCATTG 61.301 60.000 0.58 0.00 38.55 2.82
4824 5564 0.962356 GGCACAGAGTGACCCATTGG 60.962 60.000 0.58 0.00 35.14 3.16
4825 5565 0.962356 GCACAGAGTGACCCATTGGG 60.962 60.000 20.71 20.71 40.54 4.12
4834 5574 4.820744 CCCATTGGGTCAGCGGGG 62.821 72.222 14.10 0.00 38.25 5.73
4851 5591 4.083862 GCCGACCCACCTCACCTC 62.084 72.222 0.00 0.00 0.00 3.85
4852 5592 3.391382 CCGACCCACCTCACCTCC 61.391 72.222 0.00 0.00 0.00 4.30
4853 5593 3.760035 CGACCCACCTCACCTCCG 61.760 72.222 0.00 0.00 0.00 4.63
4854 5594 2.283676 GACCCACCTCACCTCCGA 60.284 66.667 0.00 0.00 0.00 4.55
4855 5595 2.283966 ACCCACCTCACCTCCGAG 60.284 66.667 0.00 0.00 0.00 4.63
4856 5596 2.283966 CCCACCTCACCTCCGAGT 60.284 66.667 0.00 0.00 0.00 4.18
4857 5597 1.000019 CCCACCTCACCTCCGAGTA 60.000 63.158 0.00 0.00 0.00 2.59
4858 5598 1.321074 CCCACCTCACCTCCGAGTAC 61.321 65.000 0.00 0.00 0.00 2.73
4859 5599 0.323542 CCACCTCACCTCCGAGTACT 60.324 60.000 0.00 0.00 0.00 2.73
4860 5600 0.811915 CACCTCACCTCCGAGTACTG 59.188 60.000 0.00 0.00 0.00 2.74
4861 5601 0.323542 ACCTCACCTCCGAGTACTGG 60.324 60.000 0.00 0.00 0.00 4.00
4862 5602 0.034380 CCTCACCTCCGAGTACTGGA 60.034 60.000 6.44 9.75 0.00 3.86
4867 5607 3.571748 CTCCGAGTACTGGAGTCCA 57.428 57.895 23.03 12.40 46.49 4.02
4868 5608 2.060050 CTCCGAGTACTGGAGTCCAT 57.940 55.000 23.03 5.85 46.49 3.41
4869 5609 1.950909 CTCCGAGTACTGGAGTCCATC 59.049 57.143 23.03 6.37 46.49 3.51
4870 5610 0.663688 CCGAGTACTGGAGTCCATCG 59.336 60.000 21.03 21.03 30.82 3.84
4871 5611 0.663688 CGAGTACTGGAGTCCATCGG 59.336 60.000 20.46 9.67 30.82 4.18
4872 5612 1.765230 GAGTACTGGAGTCCATCGGT 58.235 55.000 13.56 10.07 30.82 4.69
4873 5613 2.744166 CGAGTACTGGAGTCCATCGGTA 60.744 54.545 20.46 13.56 30.82 4.02
4874 5614 3.488363 GAGTACTGGAGTCCATCGGTAT 58.512 50.000 13.56 2.62 30.82 2.73
4875 5615 3.488363 AGTACTGGAGTCCATCGGTATC 58.512 50.000 13.56 6.87 30.82 2.24
4876 5616 2.454336 ACTGGAGTCCATCGGTATCA 57.546 50.000 13.56 0.00 30.82 2.15
4877 5617 2.032620 ACTGGAGTCCATCGGTATCAC 58.967 52.381 13.56 0.00 30.82 3.06
4878 5618 1.341531 CTGGAGTCCATCGGTATCACC 59.658 57.143 13.56 0.00 30.82 4.02
4879 5619 1.342574 TGGAGTCCATCGGTATCACCA 60.343 52.381 8.12 0.00 38.47 4.17
4880 5620 1.760613 GGAGTCCATCGGTATCACCAA 59.239 52.381 3.60 0.00 38.47 3.67
4881 5621 2.169769 GGAGTCCATCGGTATCACCAAA 59.830 50.000 3.60 0.00 38.47 3.28
4882 5622 3.181454 GGAGTCCATCGGTATCACCAAAT 60.181 47.826 3.60 0.00 38.47 2.32
4883 5623 4.058817 GAGTCCATCGGTATCACCAAATC 58.941 47.826 0.00 0.00 38.47 2.17
4884 5624 3.139077 GTCCATCGGTATCACCAAATCC 58.861 50.000 0.00 0.00 38.47 3.01
4885 5625 2.774809 TCCATCGGTATCACCAAATCCA 59.225 45.455 0.00 0.00 38.47 3.41
4886 5626 3.394274 TCCATCGGTATCACCAAATCCAT 59.606 43.478 0.00 0.00 38.47 3.41
4887 5627 3.753272 CCATCGGTATCACCAAATCCATC 59.247 47.826 0.00 0.00 38.47 3.51
4888 5628 4.505566 CCATCGGTATCACCAAATCCATCT 60.506 45.833 0.00 0.00 38.47 2.90
4889 5629 4.771114 TCGGTATCACCAAATCCATCTT 57.229 40.909 0.00 0.00 38.47 2.40
4890 5630 4.450976 TCGGTATCACCAAATCCATCTTG 58.549 43.478 0.00 0.00 38.47 3.02
4891 5631 3.003689 CGGTATCACCAAATCCATCTTGC 59.996 47.826 0.00 0.00 38.47 4.01
4892 5632 4.210331 GGTATCACCAAATCCATCTTGCT 58.790 43.478 0.00 0.00 38.42 3.91
4893 5633 5.376625 GGTATCACCAAATCCATCTTGCTA 58.623 41.667 0.00 0.00 38.42 3.49
4894 5634 5.471456 GGTATCACCAAATCCATCTTGCTAG 59.529 44.000 0.00 0.00 38.42 3.42
4895 5635 3.282021 TCACCAAATCCATCTTGCTAGC 58.718 45.455 8.10 8.10 0.00 3.42
4896 5636 3.054139 TCACCAAATCCATCTTGCTAGCT 60.054 43.478 17.23 0.00 0.00 3.32
4897 5637 3.698040 CACCAAATCCATCTTGCTAGCTT 59.302 43.478 17.23 0.00 0.00 3.74
4898 5638 4.883585 CACCAAATCCATCTTGCTAGCTTA 59.116 41.667 17.23 3.02 0.00 3.09
4899 5639 5.008415 CACCAAATCCATCTTGCTAGCTTAG 59.992 44.000 17.23 13.12 0.00 2.18
4914 5654 3.114065 AGCTTAGCTTATACGACAACGC 58.886 45.455 0.00 0.00 38.32 4.84
4915 5655 2.098021 GCTTAGCTTATACGACAACGCG 60.098 50.000 3.53 3.53 43.96 6.01
4916 5656 3.357021 CTTAGCTTATACGACAACGCGA 58.643 45.455 15.93 0.00 43.96 5.87
4917 5657 2.486951 AGCTTATACGACAACGCGAT 57.513 45.000 15.93 0.00 43.96 4.58
4918 5658 2.805845 AGCTTATACGACAACGCGATT 58.194 42.857 15.93 0.00 43.96 3.34
4919 5659 3.956233 AGCTTATACGACAACGCGATTA 58.044 40.909 15.93 0.00 43.96 1.75
4920 5660 3.973135 AGCTTATACGACAACGCGATTAG 59.027 43.478 15.93 2.08 43.96 1.73
4921 5661 3.420162 GCTTATACGACAACGCGATTAGC 60.420 47.826 15.93 4.92 43.96 3.09
4922 5662 1.484356 ATACGACAACGCGATTAGCC 58.516 50.000 15.93 0.00 44.76 3.93
4923 5663 0.170784 TACGACAACGCGATTAGCCA 59.829 50.000 15.93 0.00 44.76 4.75
4924 5664 0.668096 ACGACAACGCGATTAGCCAA 60.668 50.000 15.93 0.00 44.76 4.52
4925 5665 0.650512 CGACAACGCGATTAGCCAAT 59.349 50.000 15.93 0.00 44.76 3.16
4926 5666 1.062002 CGACAACGCGATTAGCCAATT 59.938 47.619 15.93 0.00 44.76 2.32
4927 5667 2.283086 CGACAACGCGATTAGCCAATTA 59.717 45.455 15.93 0.00 44.76 1.40
4928 5668 3.059868 CGACAACGCGATTAGCCAATTAT 60.060 43.478 15.93 0.00 44.76 1.28
4929 5669 4.149221 CGACAACGCGATTAGCCAATTATA 59.851 41.667 15.93 0.00 44.76 0.98
4930 5670 5.163992 CGACAACGCGATTAGCCAATTATAT 60.164 40.000 15.93 0.00 44.76 0.86
4931 5671 6.034150 CGACAACGCGATTAGCCAATTATATA 59.966 38.462 15.93 0.00 44.76 0.86
4932 5672 7.290857 ACAACGCGATTAGCCAATTATATAG 57.709 36.000 15.93 0.00 44.76 1.31
4933 5673 6.872020 ACAACGCGATTAGCCAATTATATAGT 59.128 34.615 15.93 0.00 44.76 2.12
4934 5674 8.030692 ACAACGCGATTAGCCAATTATATAGTA 58.969 33.333 15.93 0.00 44.76 1.82
4935 5675 9.031360 CAACGCGATTAGCCAATTATATAGTAT 57.969 33.333 15.93 0.00 44.76 2.12
4937 5677 9.674824 ACGCGATTAGCCAATTATATAGTATAC 57.325 33.333 15.93 0.00 44.76 1.47
4938 5678 9.894783 CGCGATTAGCCAATTATATAGTATACT 57.105 33.333 10.87 10.87 44.76 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.864711 GCGTGACAACAAGTTAGCTGA 59.135 47.619 0.00 0.00 0.00 4.26
17 18 0.808125 TTTGCTGCGTGACAACAAGT 59.192 45.000 0.00 0.00 35.83 3.16
19 20 0.525242 GCTTTGCTGCGTGACAACAA 60.525 50.000 0.00 0.00 32.58 2.83
55 60 3.508012 GCCTCCTTTTTCTCCCTCTTTTC 59.492 47.826 0.00 0.00 0.00 2.29
63 68 0.405973 ACCCTGCCTCCTTTTTCTCC 59.594 55.000 0.00 0.00 0.00 3.71
64 69 2.294449 AACCCTGCCTCCTTTTTCTC 57.706 50.000 0.00 0.00 0.00 2.87
71 76 1.229400 TACCGAAACCCTGCCTCCT 60.229 57.895 0.00 0.00 0.00 3.69
72 77 1.221021 CTACCGAAACCCTGCCTCC 59.779 63.158 0.00 0.00 0.00 4.30
73 78 0.611714 TTCTACCGAAACCCTGCCTC 59.388 55.000 0.00 0.00 0.00 4.70
74 79 1.003233 CTTTCTACCGAAACCCTGCCT 59.997 52.381 0.00 0.00 35.41 4.75
76 81 1.450025 CCTTTCTACCGAAACCCTGC 58.550 55.000 0.00 0.00 35.41 4.85
80 85 1.904537 TCCTCCCTTTCTACCGAAACC 59.095 52.381 0.00 0.00 35.41 3.27
89 99 1.760029 GCGATCTCTTCCTCCCTTTCT 59.240 52.381 0.00 0.00 0.00 2.52
99 109 5.600908 CTACTAGTGTAGGCGATCTCTTC 57.399 47.826 5.39 0.00 41.72 2.87
111 121 2.851194 ACTGCTCCTCCCTACTAGTGTA 59.149 50.000 5.39 0.00 0.00 2.90
113 123 2.445682 ACTGCTCCTCCCTACTAGTG 57.554 55.000 5.39 0.00 0.00 2.74
114 124 3.124861 AGTACTGCTCCTCCCTACTAGT 58.875 50.000 0.00 0.00 0.00 2.57
115 125 3.868619 AGTACTGCTCCTCCCTACTAG 57.131 52.381 0.00 0.00 0.00 2.57
116 126 4.604784 AAAGTACTGCTCCTCCCTACTA 57.395 45.455 0.00 0.00 0.00 1.82
117 127 3.476485 AAAGTACTGCTCCTCCCTACT 57.524 47.619 0.00 0.00 0.00 2.57
118 128 3.068448 GCTAAAGTACTGCTCCTCCCTAC 59.932 52.174 0.00 0.00 0.00 3.18
119 129 3.297736 GCTAAAGTACTGCTCCTCCCTA 58.702 50.000 0.00 0.00 0.00 3.53
120 130 2.112190 GCTAAAGTACTGCTCCTCCCT 58.888 52.381 0.00 0.00 0.00 4.20
121 131 1.202428 CGCTAAAGTACTGCTCCTCCC 60.202 57.143 0.00 0.00 0.00 4.30
129 139 2.024176 ATGTGGCCGCTAAAGTACTG 57.976 50.000 18.96 0.00 0.00 2.74
165 175 3.631145 ACTAAGACGACTTTGCGTGTA 57.369 42.857 5.28 0.00 45.72 2.90
197 209 3.482786 CGTAAGTACGTACGTCTTTGCT 58.517 45.455 26.53 13.05 44.13 3.91
248 264 3.004002 GGTGCAAAACTTTAACCGCTAGT 59.996 43.478 0.00 0.00 0.00 2.57
256 272 2.321719 GGGAGGGGTGCAAAACTTTAA 58.678 47.619 0.00 0.00 0.00 1.52
292 314 5.163804 GCCCGGGTGCAAATTTTAATTTTAG 60.164 40.000 24.63 0.00 36.52 1.85
293 315 4.695928 GCCCGGGTGCAAATTTTAATTTTA 59.304 37.500 24.63 0.00 36.52 1.52
298 320 0.321996 GGCCCGGGTGCAAATTTTAA 59.678 50.000 24.63 0.00 0.00 1.52
312 334 3.840594 TTATCGTCGTGGGGCCCG 61.841 66.667 19.83 7.01 0.00 6.13
313 335 2.202974 GTTATCGTCGTGGGGCCC 60.203 66.667 18.17 18.17 0.00 5.80
314 336 2.202974 GGTTATCGTCGTGGGGCC 60.203 66.667 0.00 0.00 0.00 5.80
315 337 0.808847 GAAGGTTATCGTCGTGGGGC 60.809 60.000 0.00 0.00 0.00 5.80
316 338 0.533491 TGAAGGTTATCGTCGTGGGG 59.467 55.000 0.00 0.00 0.00 4.96
325 372 2.000447 GCCGTGTCAGTGAAGGTTATC 59.000 52.381 0.00 0.00 0.00 1.75
331 378 3.414700 GCCGCCGTGTCAGTGAAG 61.415 66.667 0.00 0.00 0.00 3.02
332 379 4.980805 GGCCGCCGTGTCAGTGAA 62.981 66.667 0.00 0.00 0.00 3.18
371 436 1.137697 GGTAGGTGGTGGGGATTAGG 58.862 60.000 0.00 0.00 0.00 2.69
375 440 0.030399 GGTAGGTAGGTGGTGGGGAT 60.030 60.000 0.00 0.00 0.00 3.85
391 456 4.027731 ATCGGGTGGGGGTGGGTA 62.028 66.667 0.00 0.00 0.00 3.69
416 481 3.788817 CCGCGCGGTAAAGAATCA 58.211 55.556 39.71 0.00 0.00 2.57
467 533 4.735132 CTTGCTTCGGGCCGACGA 62.735 66.667 33.26 19.69 41.76 4.20
584 686 1.622607 CCTACAGGAATGGACCCGCA 61.623 60.000 0.00 0.00 37.39 5.69
590 692 2.070039 CCGGCCCTACAGGAATGGA 61.070 63.158 0.00 0.00 38.24 3.41
593 695 2.078665 ATGCCGGCCCTACAGGAAT 61.079 57.895 26.77 3.74 38.24 3.01
594 696 2.690881 ATGCCGGCCCTACAGGAA 60.691 61.111 26.77 0.73 38.24 3.36
595 697 3.479203 CATGCCGGCCCTACAGGA 61.479 66.667 26.77 1.65 38.24 3.86
597 699 2.203070 GACATGCCGGCCCTACAG 60.203 66.667 26.77 9.63 0.00 2.74
642 744 3.411351 CGCCAACCCAAGTCGACG 61.411 66.667 10.46 0.00 0.00 5.12
651 753 3.388703 TATGTACCGGCGCCAACCC 62.389 63.158 28.98 11.80 0.00 4.11
755 877 1.595311 TCTCCTCTGCCTCTCTCTCT 58.405 55.000 0.00 0.00 0.00 3.10
761 1080 0.823356 GCTCGATCTCCTCTGCCTCT 60.823 60.000 0.00 0.00 0.00 3.69
762 1081 0.823356 AGCTCGATCTCCTCTGCCTC 60.823 60.000 0.00 0.00 0.00 4.70
763 1082 1.108727 CAGCTCGATCTCCTCTGCCT 61.109 60.000 0.00 0.00 0.00 4.75
764 1083 1.363443 CAGCTCGATCTCCTCTGCC 59.637 63.158 0.00 0.00 0.00 4.85
765 1084 1.300080 GCAGCTCGATCTCCTCTGC 60.300 63.158 9.29 9.29 42.46 4.26
766 1085 1.363443 GGCAGCTCGATCTCCTCTG 59.637 63.158 0.00 0.00 0.00 3.35
1035 1422 1.716760 CGAGACGAAGGAGACGGAG 59.283 63.158 0.00 0.00 34.93 4.63
1167 1554 3.905678 CCGCCCGAGAGCAGGTAG 61.906 72.222 0.00 0.00 0.00 3.18
1320 1707 2.361610 AAGGCTGTGATTGCGGGG 60.362 61.111 0.00 0.00 0.00 5.73
1557 1950 4.899239 GATCCGGACAGCGCAGGG 62.899 72.222 6.12 2.70 0.00 4.45
1645 2041 1.534729 ACTGCCGAAAATGTCCCTTC 58.465 50.000 0.00 0.00 0.00 3.46
1712 2109 2.468777 CAGCACTTAAAACAAAGCAGCG 59.531 45.455 0.00 0.00 36.48 5.18
1781 2182 7.227512 GCTACAAGTCAGCCAAACATAGATAAT 59.772 37.037 0.00 0.00 32.68 1.28
1786 2187 4.002982 TGCTACAAGTCAGCCAAACATAG 58.997 43.478 0.00 0.00 38.29 2.23
1789 2229 2.340210 TGCTACAAGTCAGCCAAACA 57.660 45.000 0.00 0.00 38.29 2.83
1806 2246 5.352643 AACAAGTACAAATACTCCGTTGC 57.647 39.130 0.00 0.00 41.00 4.17
1915 2359 4.977963 CAGCAATTGACGAAAACAAGATGT 59.022 37.500 10.34 0.00 0.00 3.06
1951 2395 1.047801 GGGTTTGGGCTTGACAACAT 58.952 50.000 0.00 0.00 0.00 2.71
2146 2602 5.535333 TGTTAGAAACAACTTCCCTAGACG 58.465 41.667 0.00 0.00 38.72 4.18
2238 2697 6.690194 AGATTCATTTCTCAACTGTATGCC 57.310 37.500 0.00 0.00 0.00 4.40
2243 2702 6.319658 ACACACAAGATTCATTTCTCAACTGT 59.680 34.615 0.00 0.00 0.00 3.55
2274 2733 2.187958 ACTCATGGATTTCGGGACTGA 58.812 47.619 0.00 0.00 0.00 3.41
2275 2734 2.679837 CAACTCATGGATTTCGGGACTG 59.320 50.000 0.00 0.00 0.00 3.51
2276 2735 2.305927 ACAACTCATGGATTTCGGGACT 59.694 45.455 0.00 0.00 0.00 3.85
2277 2736 2.420022 CACAACTCATGGATTTCGGGAC 59.580 50.000 0.00 0.00 0.00 4.46
2282 2741 4.439700 CCTCATGCACAACTCATGGATTTC 60.440 45.833 0.00 0.00 41.11 2.17
2343 2802 7.990917 TCAATTAAGTTGCTGTGTCTTTTGTA 58.009 30.769 0.00 0.00 37.74 2.41
2393 3074 1.814429 TGACCACTTTGGGAGGAAGA 58.186 50.000 0.00 0.00 43.37 2.87
2413 3094 1.685224 GGAGGAAGATGTGGGCACA 59.315 57.895 0.00 0.00 46.44 4.57
2422 3103 2.743553 CAATGGCTTTGGGAGGAAGAT 58.256 47.619 5.26 0.00 0.00 2.40
2449 3153 4.273005 ACTTTTAAGTGACTGTGTTGCG 57.727 40.909 0.00 0.00 37.98 4.85
2482 3186 9.926158 CTTCTAAGTATGCAGTGAATCTATGAT 57.074 33.333 0.00 0.00 0.00 2.45
2496 3201 4.259850 GCAGCACGTAACTTCTAAGTATGC 60.260 45.833 10.80 10.80 38.57 3.14
2512 3217 2.071688 AAGAGAGTAACAGCAGCACG 57.928 50.000 0.00 0.00 0.00 5.34
2524 3229 8.062536 AGGGAACAAGTATATGAGTAAGAGAGT 58.937 37.037 0.00 0.00 0.00 3.24
2531 3236 7.783119 TCAAGCTAGGGAACAAGTATATGAGTA 59.217 37.037 0.00 0.00 0.00 2.59
2557 3262 8.611654 AAATTTGAAGTACAGTACATTACGGT 57.388 30.769 13.37 0.00 40.19 4.83
2589 3294 4.948004 ACTATGTTAAAGCAAGCTAACCCC 59.052 41.667 0.00 0.00 0.00 4.95
2679 3388 3.313526 GGCAAGGATAACTGCAGTATGTG 59.686 47.826 22.01 13.20 39.31 3.21
2683 3392 2.092968 CCAGGCAAGGATAACTGCAGTA 60.093 50.000 22.01 9.11 0.00 2.74
2687 3396 1.383523 GTCCAGGCAAGGATAACTGC 58.616 55.000 1.91 0.00 40.42 4.40
2692 3401 0.325296 ACGAGGTCCAGGCAAGGATA 60.325 55.000 1.91 0.00 40.42 2.59
2722 3431 9.004717 CAAGAGACCTATCGTATATGAGAAGAA 57.995 37.037 0.41 0.00 0.00 2.52
2727 3436 9.607988 AGATACAAGAGACCTATCGTATATGAG 57.392 37.037 0.41 0.00 0.00 2.90
2735 3444 6.183360 TGGGAAAAGATACAAGAGACCTATCG 60.183 42.308 0.00 0.00 0.00 2.92
2741 3450 5.794894 TCTGTGGGAAAAGATACAAGAGAC 58.205 41.667 0.00 0.00 0.00 3.36
2759 3468 7.641411 GCTAGCATGTTACATACATTTTCTGTG 59.359 37.037 10.63 0.00 45.19 3.66
2760 3469 7.201732 GGCTAGCATGTTACATACATTTTCTGT 60.202 37.037 18.24 0.00 45.19 3.41
2762 3471 6.263168 GGGCTAGCATGTTACATACATTTTCT 59.737 38.462 18.24 0.00 45.19 2.52
2771 3480 2.025416 TGTTGGGGCTAGCATGTTACAT 60.025 45.455 18.24 0.00 0.00 2.29
2806 3515 1.040339 CGAGGAGGAAGGTCTGGGAG 61.040 65.000 0.00 0.00 0.00 4.30
2811 3520 3.673543 AAGATACGAGGAGGAAGGTCT 57.326 47.619 0.00 0.00 0.00 3.85
2812 3521 5.771165 AGAATAAGATACGAGGAGGAAGGTC 59.229 44.000 0.00 0.00 0.00 3.85
2818 3529 7.308951 GGAAAGAGAGAATAAGATACGAGGAGG 60.309 44.444 0.00 0.00 0.00 4.30
2823 3534 9.629878 ACTTAGGAAAGAGAGAATAAGATACGA 57.370 33.333 0.00 0.00 36.50 3.43
2827 3538 8.923270 CAGGACTTAGGAAAGAGAGAATAAGAT 58.077 37.037 0.00 0.00 36.50 2.40
2853 3564 4.142600 GCAGATCAATAGTGTGGGTTCAAC 60.143 45.833 0.00 0.00 0.00 3.18
2854 3565 4.009675 GCAGATCAATAGTGTGGGTTCAA 58.990 43.478 0.00 0.00 0.00 2.69
2875 3586 2.096958 GCAACATAACAAAACCAAGCGC 60.097 45.455 0.00 0.00 0.00 5.92
2876 3587 3.380142 AGCAACATAACAAAACCAAGCG 58.620 40.909 0.00 0.00 0.00 4.68
2878 3589 5.010617 ACCCTAGCAACATAACAAAACCAAG 59.989 40.000 0.00 0.00 0.00 3.61
2886 3597 7.398829 TCTTAAATCACCCTAGCAACATAACA 58.601 34.615 0.00 0.00 0.00 2.41
2917 3632 6.585695 AACTCCAGACTGACGATAAGTAAA 57.414 37.500 3.32 0.00 0.00 2.01
2929 3644 7.170998 ACGTCAAACTTAAATAACTCCAGACTG 59.829 37.037 0.00 0.00 0.00 3.51
2987 3704 8.553459 ACTACCATAAAGTTTCATCAGTTGAG 57.447 34.615 0.00 0.00 35.27 3.02
3000 3717 7.630082 TCAAGCTCCATTAACTACCATAAAGT 58.370 34.615 0.00 0.00 0.00 2.66
3025 3742 1.265236 CCAGAGAAGTCAGGAGCACT 58.735 55.000 0.00 0.00 30.68 4.40
3029 3747 6.098982 ACCATAAATACCAGAGAAGTCAGGAG 59.901 42.308 0.00 0.00 33.49 3.69
3032 3750 7.118496 AGACCATAAATACCAGAGAAGTCAG 57.882 40.000 0.00 0.00 0.00 3.51
3039 3757 9.838339 AAACATAGAAGACCATAAATACCAGAG 57.162 33.333 0.00 0.00 0.00 3.35
3188 3906 3.331150 TGGTGAAACTAATACCAGTGCG 58.669 45.455 0.00 0.00 39.43 5.34
3311 4030 6.207417 TGAAGAATTTGAAACCATCTGGAGTC 59.793 38.462 2.55 0.49 38.94 3.36
3372 4094 1.873698 TTTGGTCGAAAGGAAGGACG 58.126 50.000 0.00 0.00 0.00 4.79
3374 4096 4.903045 AGTATTTGGTCGAAAGGAAGGA 57.097 40.909 0.00 0.00 0.00 3.36
3412 4134 5.995446 AGGAGAACCTATCAGAAATGGAAC 58.005 41.667 0.00 0.00 45.83 3.62
3675 4401 3.386237 GGCACTCCGCTCTCCACT 61.386 66.667 0.00 0.00 41.91 4.00
3816 4542 1.561076 CTCCACTGGGAACATGGATCA 59.439 52.381 0.00 0.00 44.38 2.92
3825 4551 1.070786 GACGTTGCTCCACTGGGAA 59.929 57.895 0.00 0.00 44.38 3.97
4011 4737 1.734477 CTGAACACGTGGAGAGCCG 60.734 63.158 21.57 0.00 36.79 5.52
4155 4881 0.676184 AACGCAGCAGTGAGAAGAGA 59.324 50.000 0.00 0.00 0.00 3.10
4160 4886 2.108771 TGCAACGCAGCAGTGAGA 59.891 55.556 0.00 0.00 40.11 3.27
4172 4898 1.673626 CCAACAATGCTGGGATGCAAC 60.674 52.381 0.00 0.00 46.61 4.17
4177 4903 0.685458 GCCTCCAACAATGCTGGGAT 60.685 55.000 2.52 0.00 34.46 3.85
4208 4934 1.076265 GGTAATCAACCCCCAGCCC 60.076 63.158 0.00 0.00 43.16 5.19
4228 4961 5.978814 ACTAATTACACTCCCTACAAGCTG 58.021 41.667 0.00 0.00 0.00 4.24
4266 4999 1.816074 TAAACATCCGCACAAGGTCC 58.184 50.000 0.00 0.00 0.00 4.46
4384 5122 1.102154 CACAACAGCAACCAGTCCAA 58.898 50.000 0.00 0.00 0.00 3.53
4455 5195 2.839486 ATCAGACGTCACATGTGGTT 57.161 45.000 25.16 10.01 0.00 3.67
4456 5196 2.839486 AATCAGACGTCACATGTGGT 57.161 45.000 25.16 16.07 0.00 4.16
4457 5197 5.111989 AGATAAATCAGACGTCACATGTGG 58.888 41.667 25.16 12.86 0.00 4.17
4458 5198 6.653273 AAGATAAATCAGACGTCACATGTG 57.347 37.500 20.18 20.18 0.00 3.21
4459 5199 7.653713 GGATAAGATAAATCAGACGTCACATGT 59.346 37.037 19.50 6.50 0.00 3.21
4460 5200 7.653311 TGGATAAGATAAATCAGACGTCACATG 59.347 37.037 19.50 7.68 0.00 3.21
4461 5201 7.726216 TGGATAAGATAAATCAGACGTCACAT 58.274 34.615 19.50 5.85 0.00 3.21
4462 5202 7.107639 TGGATAAGATAAATCAGACGTCACA 57.892 36.000 19.50 3.30 0.00 3.58
4463 5203 7.203910 ACTGGATAAGATAAATCAGACGTCAC 58.796 38.462 19.50 0.00 0.00 3.67
4464 5204 7.285629 AGACTGGATAAGATAAATCAGACGTCA 59.714 37.037 19.50 0.00 0.00 4.35
4465 5205 7.653647 AGACTGGATAAGATAAATCAGACGTC 58.346 38.462 7.70 7.70 0.00 4.34
4466 5206 7.589958 AGACTGGATAAGATAAATCAGACGT 57.410 36.000 0.00 0.00 0.00 4.34
4482 5222 9.907229 TCGATGTATAGACATATTAGACTGGAT 57.093 33.333 2.29 0.00 46.64 3.41
4483 5223 9.907229 ATCGATGTATAGACATATTAGACTGGA 57.093 33.333 2.29 0.00 46.64 3.86
4484 5224 9.943163 CATCGATGTATAGACATATTAGACTGG 57.057 37.037 17.50 0.00 46.64 4.00
4485 5225 9.943163 CCATCGATGTATAGACATATTAGACTG 57.057 37.037 23.27 0.00 46.64 3.51
4486 5226 8.625651 GCCATCGATGTATAGACATATTAGACT 58.374 37.037 23.27 0.00 46.64 3.24
4487 5227 8.625651 AGCCATCGATGTATAGACATATTAGAC 58.374 37.037 23.27 0.00 46.64 2.59
4488 5228 8.624776 CAGCCATCGATGTATAGACATATTAGA 58.375 37.037 23.27 1.93 46.64 2.10
4489 5229 7.380870 GCAGCCATCGATGTATAGACATATTAG 59.619 40.741 23.27 4.61 46.64 1.73
4490 5230 7.147915 TGCAGCCATCGATGTATAGACATATTA 60.148 37.037 23.27 0.00 46.64 0.98
4491 5231 6.045318 GCAGCCATCGATGTATAGACATATT 58.955 40.000 23.27 0.00 46.64 1.28
4492 5232 5.127682 TGCAGCCATCGATGTATAGACATAT 59.872 40.000 23.27 0.00 46.64 1.78
4493 5233 4.462483 TGCAGCCATCGATGTATAGACATA 59.538 41.667 23.27 0.00 46.64 2.29
4495 5235 2.627699 TGCAGCCATCGATGTATAGACA 59.372 45.455 23.27 11.00 40.72 3.41
4496 5236 3.303881 TGCAGCCATCGATGTATAGAC 57.696 47.619 23.27 8.69 0.00 2.59
4497 5237 3.853475 CATGCAGCCATCGATGTATAGA 58.147 45.455 23.27 5.49 0.00 1.98
4498 5238 2.350804 GCATGCAGCCATCGATGTATAG 59.649 50.000 23.27 9.60 37.23 1.31
4499 5239 2.289569 TGCATGCAGCCATCGATGTATA 60.290 45.455 23.27 6.15 44.83 1.47
4500 5240 1.162698 GCATGCAGCCATCGATGTAT 58.837 50.000 23.27 9.08 37.23 2.29
4501 5241 0.179051 TGCATGCAGCCATCGATGTA 60.179 50.000 23.27 0.44 44.83 2.29
4502 5242 0.822121 ATGCATGCAGCCATCGATGT 60.822 50.000 26.69 3.55 44.83 3.06
4503 5243 0.109735 GATGCATGCAGCCATCGATG 60.110 55.000 25.21 18.76 44.83 3.84
4504 5244 2.254471 GATGCATGCAGCCATCGAT 58.746 52.632 25.21 5.12 44.83 3.59
4505 5245 3.740513 GATGCATGCAGCCATCGA 58.259 55.556 25.21 0.00 44.83 3.59
4506 5246 2.251371 CGATGCATGCAGCCATCG 59.749 61.111 28.76 25.38 44.83 3.84
4507 5247 1.164662 AGACGATGCATGCAGCCATC 61.165 55.000 28.76 24.63 44.83 3.51
4508 5248 0.107268 TAGACGATGCATGCAGCCAT 59.893 50.000 28.76 18.07 44.83 4.40
4509 5249 0.531311 CTAGACGATGCATGCAGCCA 60.531 55.000 28.76 11.54 44.83 4.75
4510 5250 0.249615 TCTAGACGATGCATGCAGCC 60.250 55.000 28.76 19.54 44.83 4.85
4511 5251 1.459975 CATCTAGACGATGCATGCAGC 59.540 52.381 25.69 25.69 42.75 5.25
4520 5260 1.000827 CGGCTTCTGCATCTAGACGAT 60.001 52.381 11.43 0.00 42.93 3.73
4521 5261 0.382158 CGGCTTCTGCATCTAGACGA 59.618 55.000 11.43 0.00 42.93 4.20
4522 5262 0.596083 CCGGCTTCTGCATCTAGACG 60.596 60.000 10.24 10.24 41.91 4.18
4523 5263 0.249657 CCCGGCTTCTGCATCTAGAC 60.250 60.000 0.00 0.00 41.91 2.59
4524 5264 1.402896 CCCCGGCTTCTGCATCTAGA 61.403 60.000 0.00 0.00 41.91 2.43
4525 5265 1.070445 CCCCGGCTTCTGCATCTAG 59.930 63.158 0.00 0.00 41.91 2.43
4526 5266 2.443394 CCCCCGGCTTCTGCATCTA 61.443 63.158 0.00 0.00 41.91 1.98
4527 5267 3.801997 CCCCCGGCTTCTGCATCT 61.802 66.667 0.00 0.00 41.91 2.90
4528 5268 3.645268 AACCCCCGGCTTCTGCATC 62.645 63.158 0.00 0.00 41.91 3.91
4529 5269 1.858739 TAAACCCCCGGCTTCTGCAT 61.859 55.000 0.00 0.00 41.91 3.96
4530 5270 1.858739 ATAAACCCCCGGCTTCTGCA 61.859 55.000 0.00 0.00 41.91 4.41
4531 5271 1.076995 ATAAACCCCCGGCTTCTGC 60.077 57.895 0.00 0.00 38.76 4.26
4532 5272 0.465642 GGATAAACCCCCGGCTTCTG 60.466 60.000 0.00 0.00 0.00 3.02
4533 5273 0.623617 AGGATAAACCCCCGGCTTCT 60.624 55.000 0.00 0.00 40.05 2.85
4534 5274 0.179026 GAGGATAAACCCCCGGCTTC 60.179 60.000 0.00 0.00 40.05 3.86
4535 5275 1.642513 GGAGGATAAACCCCCGGCTT 61.643 60.000 0.00 0.00 40.05 4.35
4536 5276 2.076803 GGAGGATAAACCCCCGGCT 61.077 63.158 0.00 0.00 40.05 5.52
4537 5277 1.642513 AAGGAGGATAAACCCCCGGC 61.643 60.000 0.00 0.00 40.05 6.13
4538 5278 0.924090 AAAGGAGGATAAACCCCCGG 59.076 55.000 0.00 0.00 40.05 5.73
4539 5279 2.651455 GAAAAGGAGGATAAACCCCCG 58.349 52.381 0.00 0.00 40.05 5.73
4540 5280 2.313643 TGGAAAAGGAGGATAAACCCCC 59.686 50.000 0.00 0.00 40.05 5.40
4541 5281 3.750501 TGGAAAAGGAGGATAAACCCC 57.249 47.619 0.00 0.00 40.05 4.95
4542 5282 6.428083 TTTTTGGAAAAGGAGGATAAACCC 57.572 37.500 0.00 0.00 40.05 4.11
4584 5324 8.990693 ACCCTACACCTGATAATAATAATCCT 57.009 34.615 0.00 0.00 0.00 3.24
4585 5325 9.449719 CAACCCTACACCTGATAATAATAATCC 57.550 37.037 0.00 0.00 0.00 3.01
4589 5329 9.886337 TCTACAACCCTACACCTGATAATAATA 57.114 33.333 0.00 0.00 0.00 0.98
4590 5330 8.792830 TCTACAACCCTACACCTGATAATAAT 57.207 34.615 0.00 0.00 0.00 1.28
4591 5331 8.612486 TTCTACAACCCTACACCTGATAATAA 57.388 34.615 0.00 0.00 0.00 1.40
4592 5332 8.612486 TTTCTACAACCCTACACCTGATAATA 57.388 34.615 0.00 0.00 0.00 0.98
4593 5333 7.402071 TCTTTCTACAACCCTACACCTGATAAT 59.598 37.037 0.00 0.00 0.00 1.28
4594 5334 6.727231 TCTTTCTACAACCCTACACCTGATAA 59.273 38.462 0.00 0.00 0.00 1.75
4595 5335 6.258354 TCTTTCTACAACCCTACACCTGATA 58.742 40.000 0.00 0.00 0.00 2.15
4596 5336 5.091552 TCTTTCTACAACCCTACACCTGAT 58.908 41.667 0.00 0.00 0.00 2.90
4597 5337 4.485875 TCTTTCTACAACCCTACACCTGA 58.514 43.478 0.00 0.00 0.00 3.86
4598 5338 4.283722 ACTCTTTCTACAACCCTACACCTG 59.716 45.833 0.00 0.00 0.00 4.00
4599 5339 4.283722 CACTCTTTCTACAACCCTACACCT 59.716 45.833 0.00 0.00 0.00 4.00
4600 5340 4.562963 CCACTCTTTCTACAACCCTACACC 60.563 50.000 0.00 0.00 0.00 4.16
4601 5341 4.040095 ACCACTCTTTCTACAACCCTACAC 59.960 45.833 0.00 0.00 0.00 2.90
4602 5342 4.228824 ACCACTCTTTCTACAACCCTACA 58.771 43.478 0.00 0.00 0.00 2.74
4603 5343 4.886496 ACCACTCTTTCTACAACCCTAC 57.114 45.455 0.00 0.00 0.00 3.18
4604 5344 5.246883 GGTAACCACTCTTTCTACAACCCTA 59.753 44.000 0.00 0.00 0.00 3.53
4605 5345 4.041321 GGTAACCACTCTTTCTACAACCCT 59.959 45.833 0.00 0.00 0.00 4.34
4606 5346 4.321718 GGTAACCACTCTTTCTACAACCC 58.678 47.826 0.00 0.00 0.00 4.11
4632 5372 0.749818 TCTAGTCAGAGCCAGCGAGG 60.750 60.000 0.00 0.00 41.84 4.63
4633 5373 1.098869 TTCTAGTCAGAGCCAGCGAG 58.901 55.000 0.00 0.00 30.73 5.03
4634 5374 1.678627 GATTCTAGTCAGAGCCAGCGA 59.321 52.381 0.00 0.00 30.73 4.93
4635 5375 1.680735 AGATTCTAGTCAGAGCCAGCG 59.319 52.381 0.00 0.00 30.73 5.18
4636 5376 2.430332 ACAGATTCTAGTCAGAGCCAGC 59.570 50.000 0.00 0.00 30.73 4.85
4637 5377 4.734398 AACAGATTCTAGTCAGAGCCAG 57.266 45.455 0.00 0.00 30.73 4.85
4638 5378 4.380973 CGAAACAGATTCTAGTCAGAGCCA 60.381 45.833 0.00 0.00 35.79 4.75
4639 5379 4.109050 CGAAACAGATTCTAGTCAGAGCC 58.891 47.826 0.00 0.00 35.79 4.70
4640 5380 4.987832 TCGAAACAGATTCTAGTCAGAGC 58.012 43.478 0.00 0.00 35.79 4.09
4641 5381 7.009999 CCAAATCGAAACAGATTCTAGTCAGAG 59.990 40.741 0.00 0.00 39.69 3.35
4642 5382 6.813649 CCAAATCGAAACAGATTCTAGTCAGA 59.186 38.462 0.00 0.00 39.69 3.27
4643 5383 6.591834 ACCAAATCGAAACAGATTCTAGTCAG 59.408 38.462 0.00 0.00 39.69 3.51
4644 5384 6.464222 ACCAAATCGAAACAGATTCTAGTCA 58.536 36.000 0.00 0.00 39.69 3.41
4645 5385 6.969828 ACCAAATCGAAACAGATTCTAGTC 57.030 37.500 0.00 0.00 39.69 2.59
4646 5386 7.308589 CCAAACCAAATCGAAACAGATTCTAGT 60.309 37.037 0.00 0.00 39.69 2.57
4647 5387 7.023575 CCAAACCAAATCGAAACAGATTCTAG 58.976 38.462 0.00 0.00 39.69 2.43
4648 5388 6.712998 TCCAAACCAAATCGAAACAGATTCTA 59.287 34.615 0.00 0.00 39.69 2.10
4649 5389 5.534654 TCCAAACCAAATCGAAACAGATTCT 59.465 36.000 0.00 0.00 39.69 2.40
4650 5390 5.768317 TCCAAACCAAATCGAAACAGATTC 58.232 37.500 0.00 0.00 39.69 2.52
4651 5391 5.278957 CCTCCAAACCAAATCGAAACAGATT 60.279 40.000 0.00 0.00 42.13 2.40
4652 5392 4.218417 CCTCCAAACCAAATCGAAACAGAT 59.782 41.667 0.00 0.00 0.00 2.90
4653 5393 3.568007 CCTCCAAACCAAATCGAAACAGA 59.432 43.478 0.00 0.00 0.00 3.41
4654 5394 3.305335 CCCTCCAAACCAAATCGAAACAG 60.305 47.826 0.00 0.00 0.00 3.16
4655 5395 2.625790 CCCTCCAAACCAAATCGAAACA 59.374 45.455 0.00 0.00 0.00 2.83
4656 5396 2.609491 GCCCTCCAAACCAAATCGAAAC 60.609 50.000 0.00 0.00 0.00 2.78
4657 5397 1.616374 GCCCTCCAAACCAAATCGAAA 59.384 47.619 0.00 0.00 0.00 3.46
4658 5398 1.253100 GCCCTCCAAACCAAATCGAA 58.747 50.000 0.00 0.00 0.00 3.71
4659 5399 0.958382 CGCCCTCCAAACCAAATCGA 60.958 55.000 0.00 0.00 0.00 3.59
4660 5400 1.241315 ACGCCCTCCAAACCAAATCG 61.241 55.000 0.00 0.00 0.00 3.34
4661 5401 0.243636 CACGCCCTCCAAACCAAATC 59.756 55.000 0.00 0.00 0.00 2.17
4662 5402 0.178975 TCACGCCCTCCAAACCAAAT 60.179 50.000 0.00 0.00 0.00 2.32
4663 5403 0.821711 CTCACGCCCTCCAAACCAAA 60.822 55.000 0.00 0.00 0.00 3.28
4664 5404 1.228124 CTCACGCCCTCCAAACCAA 60.228 57.895 0.00 0.00 0.00 3.67
4665 5405 1.990160 AACTCACGCCCTCCAAACCA 61.990 55.000 0.00 0.00 0.00 3.67
4666 5406 0.035739 TAACTCACGCCCTCCAAACC 59.964 55.000 0.00 0.00 0.00 3.27
4667 5407 1.270678 ACTAACTCACGCCCTCCAAAC 60.271 52.381 0.00 0.00 0.00 2.93
4668 5408 1.053424 ACTAACTCACGCCCTCCAAA 58.947 50.000 0.00 0.00 0.00 3.28
4669 5409 1.001633 GAACTAACTCACGCCCTCCAA 59.998 52.381 0.00 0.00 0.00 3.53
4670 5410 0.606604 GAACTAACTCACGCCCTCCA 59.393 55.000 0.00 0.00 0.00 3.86
4671 5411 0.108281 GGAACTAACTCACGCCCTCC 60.108 60.000 0.00 0.00 0.00 4.30
4672 5412 0.458025 CGGAACTAACTCACGCCCTC 60.458 60.000 0.00 0.00 0.00 4.30
4673 5413 1.183676 ACGGAACTAACTCACGCCCT 61.184 55.000 0.00 0.00 0.00 5.19
4674 5414 0.320160 AACGGAACTAACTCACGCCC 60.320 55.000 0.00 0.00 0.00 6.13
4675 5415 1.458445 GAAACGGAACTAACTCACGCC 59.542 52.381 0.00 0.00 0.00 5.68
4676 5416 2.129607 TGAAACGGAACTAACTCACGC 58.870 47.619 0.00 0.00 0.00 5.34
4677 5417 2.729882 CCTGAAACGGAACTAACTCACG 59.270 50.000 0.00 0.00 0.00 4.35
4678 5418 3.064931 CCCTGAAACGGAACTAACTCAC 58.935 50.000 0.00 0.00 0.00 3.51
4679 5419 2.701951 ACCCTGAAACGGAACTAACTCA 59.298 45.455 0.00 0.00 0.00 3.41
4680 5420 3.064931 CACCCTGAAACGGAACTAACTC 58.935 50.000 0.00 0.00 0.00 3.01
4681 5421 2.224450 CCACCCTGAAACGGAACTAACT 60.224 50.000 0.00 0.00 0.00 2.24
4682 5422 2.148768 CCACCCTGAAACGGAACTAAC 58.851 52.381 0.00 0.00 0.00 2.34
4683 5423 1.072648 CCCACCCTGAAACGGAACTAA 59.927 52.381 0.00 0.00 0.00 2.24
4684 5424 0.688487 CCCACCCTGAAACGGAACTA 59.312 55.000 0.00 0.00 0.00 2.24
4685 5425 1.057851 TCCCACCCTGAAACGGAACT 61.058 55.000 0.00 0.00 0.00 3.01
4686 5426 0.179012 TTCCCACCCTGAAACGGAAC 60.179 55.000 0.00 0.00 0.00 3.62
4687 5427 0.774908 ATTCCCACCCTGAAACGGAA 59.225 50.000 0.00 0.00 37.04 4.30
4688 5428 0.037590 CATTCCCACCCTGAAACGGA 59.962 55.000 0.00 0.00 0.00 4.69
4689 5429 0.965363 CCATTCCCACCCTGAAACGG 60.965 60.000 0.00 0.00 0.00 4.44
4690 5430 0.965363 CCCATTCCCACCCTGAAACG 60.965 60.000 0.00 0.00 0.00 3.60
4691 5431 1.257750 GCCCATTCCCACCCTGAAAC 61.258 60.000 0.00 0.00 0.00 2.78
4692 5432 1.078347 GCCCATTCCCACCCTGAAA 59.922 57.895 0.00 0.00 0.00 2.69
4693 5433 2.770130 GCCCATTCCCACCCTGAA 59.230 61.111 0.00 0.00 0.00 3.02
4694 5434 3.346734 GGCCCATTCCCACCCTGA 61.347 66.667 0.00 0.00 0.00 3.86
4695 5435 4.820744 CGGCCCATTCCCACCCTG 62.821 72.222 0.00 0.00 0.00 4.45
4699 5439 4.815108 GACCCGGCCCATTCCCAC 62.815 72.222 0.00 0.00 0.00 4.61
4702 5442 4.851179 GTCGACCCGGCCCATTCC 62.851 72.222 3.51 0.00 0.00 3.01
4703 5443 4.851179 GGTCGACCCGGCCCATTC 62.851 72.222 24.75 0.00 46.90 2.67
4727 5467 1.110518 TTTTGGGTCGGGCCAAAGAC 61.111 55.000 4.39 10.97 39.65 3.01
4728 5468 0.397254 TTTTTGGGTCGGGCCAAAGA 60.397 50.000 4.39 0.00 39.65 2.52
4729 5469 2.128729 TTTTTGGGTCGGGCCAAAG 58.871 52.632 4.39 0.00 39.65 2.77
4730 5470 4.375406 TTTTTGGGTCGGGCCAAA 57.625 50.000 4.39 0.00 39.65 3.28
4745 5485 1.613437 CTGACCATCGGCCTTGTTTTT 59.387 47.619 0.00 0.00 0.00 1.94
4746 5486 1.247567 CTGACCATCGGCCTTGTTTT 58.752 50.000 0.00 0.00 0.00 2.43
4747 5487 0.110486 ACTGACCATCGGCCTTGTTT 59.890 50.000 0.00 0.00 0.00 2.83
4748 5488 0.110486 AACTGACCATCGGCCTTGTT 59.890 50.000 0.00 0.00 0.00 2.83
4749 5489 0.606401 CAACTGACCATCGGCCTTGT 60.606 55.000 0.00 0.00 0.00 3.16
4750 5490 1.308069 CCAACTGACCATCGGCCTTG 61.308 60.000 0.00 0.00 0.00 3.61
4751 5491 1.002134 CCAACTGACCATCGGCCTT 60.002 57.895 0.00 0.00 0.00 4.35
4752 5492 2.671070 CCAACTGACCATCGGCCT 59.329 61.111 0.00 0.00 0.00 5.19
4753 5493 2.438434 CCCAACTGACCATCGGCC 60.438 66.667 0.00 0.00 0.00 6.13
4754 5494 3.134127 GCCCAACTGACCATCGGC 61.134 66.667 0.00 0.00 0.00 5.54
4755 5495 2.438434 GGCCCAACTGACCATCGG 60.438 66.667 0.00 0.00 0.00 4.18
4756 5496 2.819595 CGGCCCAACTGACCATCG 60.820 66.667 0.00 0.00 0.00 3.84
4757 5497 2.438434 CCGGCCCAACTGACCATC 60.438 66.667 0.00 0.00 0.00 3.51
4758 5498 4.740822 GCCGGCCCAACTGACCAT 62.741 66.667 18.11 0.00 0.00 3.55
4761 5501 4.660938 AAGGCCGGCCCAACTGAC 62.661 66.667 41.72 14.89 36.58 3.51
4762 5502 4.659172 CAAGGCCGGCCCAACTGA 62.659 66.667 41.72 0.00 36.58 3.41
4763 5503 3.561120 TACAAGGCCGGCCCAACTG 62.561 63.158 41.72 31.97 36.58 3.16
4764 5504 3.253838 TACAAGGCCGGCCCAACT 61.254 61.111 41.72 21.73 36.58 3.16
4765 5505 3.060000 GTACAAGGCCGGCCCAAC 61.060 66.667 41.72 28.32 36.58 3.77
4766 5506 2.642183 TTTGTACAAGGCCGGCCCAA 62.642 55.000 41.72 32.23 36.58 4.12
4767 5507 2.642183 TTTTGTACAAGGCCGGCCCA 62.642 55.000 41.72 28.52 36.58 5.36
4768 5508 1.465200 TTTTTGTACAAGGCCGGCCC 61.465 55.000 41.72 26.08 36.58 5.80
4769 5509 2.042800 TTTTTGTACAAGGCCGGCC 58.957 52.632 39.29 39.29 0.00 6.13
4786 5526 0.322546 CGGCTCTACTGGCCCTTTTT 60.323 55.000 0.00 0.00 46.24 1.94
4787 5527 1.299976 CGGCTCTACTGGCCCTTTT 59.700 57.895 0.00 0.00 46.24 2.27
4788 5528 2.670148 CCGGCTCTACTGGCCCTTT 61.670 63.158 0.00 0.00 46.24 3.11
4789 5529 3.083997 CCGGCTCTACTGGCCCTT 61.084 66.667 0.00 0.00 46.24 3.95
4795 5535 1.140589 CTCTGTGCCGGCTCTACTG 59.859 63.158 29.70 20.56 0.00 2.74
4796 5536 1.304547 ACTCTGTGCCGGCTCTACT 60.305 57.895 29.70 5.39 0.00 2.57
4797 5537 1.153745 CACTCTGTGCCGGCTCTAC 60.154 63.158 29.70 18.50 0.00 2.59
4798 5538 1.304134 TCACTCTGTGCCGGCTCTA 60.304 57.895 29.70 15.25 32.98 2.43
4799 5539 2.601666 TCACTCTGTGCCGGCTCT 60.602 61.111 29.70 4.90 32.98 4.09
4800 5540 2.433318 GTCACTCTGTGCCGGCTC 60.433 66.667 29.70 25.38 32.98 4.70
4801 5541 4.008933 GGTCACTCTGTGCCGGCT 62.009 66.667 29.70 1.94 32.98 5.52
4803 5543 2.469465 AATGGGTCACTCTGTGCCGG 62.469 60.000 0.00 0.00 33.06 6.13
4804 5544 1.003355 AATGGGTCACTCTGTGCCG 60.003 57.895 0.00 0.00 33.06 5.69
4805 5545 0.962356 CCAATGGGTCACTCTGTGCC 60.962 60.000 0.00 0.00 32.98 5.01
4806 5546 0.962356 CCCAATGGGTCACTCTGTGC 60.962 60.000 10.91 0.00 38.25 4.57
4807 5547 3.254629 CCCAATGGGTCACTCTGTG 57.745 57.895 10.91 0.00 38.25 3.66
4834 5574 4.083862 GAGGTGAGGTGGGTCGGC 62.084 72.222 0.00 0.00 0.00 5.54
4835 5575 3.391382 GGAGGTGAGGTGGGTCGG 61.391 72.222 0.00 0.00 0.00 4.79
4836 5576 3.760035 CGGAGGTGAGGTGGGTCG 61.760 72.222 0.00 0.00 0.00 4.79
4837 5577 2.283676 TCGGAGGTGAGGTGGGTC 60.284 66.667 0.00 0.00 0.00 4.46
4838 5578 1.797018 TACTCGGAGGTGAGGTGGGT 61.797 60.000 10.23 0.00 40.39 4.51
4839 5579 1.000019 TACTCGGAGGTGAGGTGGG 60.000 63.158 10.23 0.00 40.39 4.61
4840 5580 0.323542 AGTACTCGGAGGTGAGGTGG 60.324 60.000 10.23 0.00 40.39 4.61
4841 5581 0.811915 CAGTACTCGGAGGTGAGGTG 59.188 60.000 10.23 0.00 40.39 4.00
4842 5582 0.323542 CCAGTACTCGGAGGTGAGGT 60.324 60.000 10.23 0.00 40.39 3.85
4843 5583 0.034380 TCCAGTACTCGGAGGTGAGG 60.034 60.000 10.23 6.26 40.39 3.86
4844 5584 1.384525 CTCCAGTACTCGGAGGTGAG 58.615 60.000 23.36 3.96 45.43 3.51
4845 5585 3.571748 CTCCAGTACTCGGAGGTGA 57.428 57.895 23.36 0.00 45.43 4.02
4850 5590 1.746171 CGATGGACTCCAGTACTCGGA 60.746 57.143 9.96 11.89 36.75 4.55
4851 5591 0.663688 CGATGGACTCCAGTACTCGG 59.336 60.000 9.96 0.00 36.75 4.63
4852 5592 0.663688 CCGATGGACTCCAGTACTCG 59.336 60.000 10.64 10.64 36.75 4.18
4853 5593 1.765230 ACCGATGGACTCCAGTACTC 58.235 55.000 3.62 0.00 36.75 2.59
4854 5594 3.117625 TGATACCGATGGACTCCAGTACT 60.118 47.826 3.62 0.00 36.75 2.73
4855 5595 3.004524 GTGATACCGATGGACTCCAGTAC 59.995 52.174 3.62 0.00 36.75 2.73
4856 5596 3.220110 GTGATACCGATGGACTCCAGTA 58.780 50.000 3.62 1.30 36.75 2.74
4857 5597 2.032620 GTGATACCGATGGACTCCAGT 58.967 52.381 3.62 0.00 36.75 4.00
4858 5598 1.341531 GGTGATACCGATGGACTCCAG 59.658 57.143 3.62 0.00 36.75 3.86
4859 5599 1.342574 TGGTGATACCGATGGACTCCA 60.343 52.381 0.00 0.00 42.58 3.86
4860 5600 1.410004 TGGTGATACCGATGGACTCC 58.590 55.000 0.00 0.00 42.58 3.85
4861 5601 3.536956 TTTGGTGATACCGATGGACTC 57.463 47.619 0.00 0.00 42.58 3.36
4862 5602 3.181454 GGATTTGGTGATACCGATGGACT 60.181 47.826 0.00 0.00 42.58 3.85
4863 5603 3.139077 GGATTTGGTGATACCGATGGAC 58.861 50.000 0.00 0.00 42.58 4.02
4864 5604 2.774809 TGGATTTGGTGATACCGATGGA 59.225 45.455 0.00 0.00 42.58 3.41
4865 5605 3.207265 TGGATTTGGTGATACCGATGG 57.793 47.619 0.00 0.00 42.58 3.51
4866 5606 4.645535 AGATGGATTTGGTGATACCGATG 58.354 43.478 0.00 0.00 42.58 3.84
4867 5607 4.982241 AGATGGATTTGGTGATACCGAT 57.018 40.909 0.00 0.00 42.58 4.18
4868 5608 4.450976 CAAGATGGATTTGGTGATACCGA 58.549 43.478 0.00 0.00 42.58 4.69
4869 5609 3.003689 GCAAGATGGATTTGGTGATACCG 59.996 47.826 0.00 0.00 42.58 4.02
4870 5610 4.210331 AGCAAGATGGATTTGGTGATACC 58.790 43.478 0.00 0.00 39.22 2.73
4871 5611 5.049129 GCTAGCAAGATGGATTTGGTGATAC 60.049 44.000 10.63 0.00 36.94 2.24
4872 5612 5.065914 GCTAGCAAGATGGATTTGGTGATA 58.934 41.667 10.63 0.00 36.94 2.15
4873 5613 3.887716 GCTAGCAAGATGGATTTGGTGAT 59.112 43.478 10.63 0.00 36.94 3.06
4874 5614 3.054139 AGCTAGCAAGATGGATTTGGTGA 60.054 43.478 18.83 0.00 36.94 4.02
4875 5615 3.285484 AGCTAGCAAGATGGATTTGGTG 58.715 45.455 18.83 0.00 36.94 4.17
4876 5616 3.659183 AGCTAGCAAGATGGATTTGGT 57.341 42.857 18.83 0.00 39.38 3.67
4877 5617 5.686159 CTAAGCTAGCAAGATGGATTTGG 57.314 43.478 18.83 0.00 0.00 3.28
4890 5630 7.056184 GCGTTGTCGTATAAGCTAAGCTAGC 62.056 48.000 6.62 6.62 44.54 3.42
4891 5631 4.379204 GCGTTGTCGTATAAGCTAAGCTAG 59.621 45.833 0.00 0.00 37.36 3.42
4892 5632 4.285292 GCGTTGTCGTATAAGCTAAGCTA 58.715 43.478 0.00 0.00 37.36 3.32
4893 5633 3.114065 GCGTTGTCGTATAAGCTAAGCT 58.886 45.455 0.00 0.00 39.01 3.74
4894 5634 2.098021 CGCGTTGTCGTATAAGCTAAGC 60.098 50.000 0.00 0.00 39.49 3.09
4895 5635 3.357021 TCGCGTTGTCGTATAAGCTAAG 58.643 45.455 5.77 0.00 39.49 2.18
4896 5636 3.403613 TCGCGTTGTCGTATAAGCTAA 57.596 42.857 5.77 0.00 39.49 3.09
4897 5637 3.614159 ATCGCGTTGTCGTATAAGCTA 57.386 42.857 5.77 0.00 39.49 3.32
4898 5638 2.486951 ATCGCGTTGTCGTATAAGCT 57.513 45.000 5.77 0.00 39.49 3.74
4899 5639 3.420162 GCTAATCGCGTTGTCGTATAAGC 60.420 47.826 5.77 0.00 39.49 3.09
4900 5640 3.119136 GGCTAATCGCGTTGTCGTATAAG 59.881 47.826 5.77 0.00 40.44 1.73
4901 5641 3.044986 GGCTAATCGCGTTGTCGTATAA 58.955 45.455 5.77 0.00 40.44 0.98
4902 5642 2.033174 TGGCTAATCGCGTTGTCGTATA 59.967 45.455 5.77 0.00 40.44 1.47
4903 5643 1.202325 TGGCTAATCGCGTTGTCGTAT 60.202 47.619 5.77 0.00 40.44 3.06
4904 5644 0.170784 TGGCTAATCGCGTTGTCGTA 59.829 50.000 5.77 0.00 40.44 3.43
4905 5645 0.668096 TTGGCTAATCGCGTTGTCGT 60.668 50.000 5.77 0.00 40.44 4.34
4906 5646 0.650512 ATTGGCTAATCGCGTTGTCG 59.349 50.000 5.77 0.00 40.44 4.35
4907 5647 2.825086 AATTGGCTAATCGCGTTGTC 57.175 45.000 5.77 0.00 40.44 3.18
4908 5648 6.872020 ACTATATAATTGGCTAATCGCGTTGT 59.128 34.615 5.77 0.00 40.44 3.32
4909 5649 7.290857 ACTATATAATTGGCTAATCGCGTTG 57.709 36.000 5.77 0.00 40.44 4.10
4911 5651 9.674824 GTATACTATATAATTGGCTAATCGCGT 57.325 33.333 5.77 0.00 40.44 6.01
4912 5652 9.894783 AGTATACTATATAATTGGCTAATCGCG 57.105 33.333 2.75 0.00 40.44 5.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.