Multiple sequence alignment - TraesCS3D01G014500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G014500 chr3D 100.000 4252 0 0 1 4252 5009174 5004923 0.000000e+00 7853.0
1 TraesCS3D01G014500 chr3D 87.366 1306 151 11 2122 3421 4967399 4966102 0.000000e+00 1485.0
2 TraesCS3D01G014500 chr3D 78.317 927 140 34 604 1497 5027627 5026729 3.740000e-150 542.0
3 TraesCS3D01G014500 chrUn 89.818 3025 257 28 417 3417 36342802 36345799 0.000000e+00 3832.0
4 TraesCS3D01G014500 chrUn 89.818 3025 257 28 417 3417 214892203 214889206 0.000000e+00 3832.0
5 TraesCS3D01G014500 chrUn 87.203 1305 147 13 2122 3421 238784738 238786027 0.000000e+00 1467.0
6 TraesCS3D01G014500 chrUn 87.203 1305 147 13 2122 3421 240351536 240350247 0.000000e+00 1467.0
7 TraesCS3D01G014500 chrUn 85.747 1305 170 12 2119 3421 296501505 296500215 0.000000e+00 1365.0
8 TraesCS3D01G014500 chrUn 87.573 1199 114 18 488 1681 35314842 35316010 0.000000e+00 1356.0
9 TraesCS3D01G014500 chrUn 77.768 1192 175 41 604 1762 34655321 34656455 0.000000e+00 651.0
10 TraesCS3D01G014500 chrUn 86.992 246 23 8 4008 4252 260327207 260326970 7.010000e-68 268.0
11 TraesCS3D01G014500 chrUn 86.179 246 25 8 4008 4252 238786424 238786661 1.520000e-64 257.0
12 TraesCS3D01G014500 chrUn 86.179 246 25 8 4008 4252 240349850 240349613 1.520000e-64 257.0
13 TraesCS3D01G014500 chrUn 86.207 232 26 6 174 403 36342595 36342822 3.280000e-61 246.0
14 TraesCS3D01G014500 chrUn 85.714 238 28 6 174 409 214892410 214892177 3.280000e-61 246.0
15 TraesCS3D01G014500 chrUn 83.254 209 25 6 3985 4185 260324631 260324425 2.610000e-42 183.0
16 TraesCS3D01G014500 chrUn 90.598 117 10 1 3767 3883 36346293 36346408 2.050000e-33 154.0
17 TraesCS3D01G014500 chrUn 91.228 114 9 1 3770 3883 214888709 214888597 2.050000e-33 154.0
18 TraesCS3D01G014500 chrUn 89.474 114 11 1 3770 3883 260327408 260327296 4.430000e-30 143.0
19 TraesCS3D01G014500 chrUn 100.000 34 0 0 3537 3570 36347205 36347238 3.550000e-06 63.9
20 TraesCS3D01G014500 chrUn 100.000 34 0 0 3537 3570 214887800 214887767 3.550000e-06 63.9
21 TraesCS3D01G014500 chrUn 100.000 34 0 0 3537 3570 260324910 260324877 3.550000e-06 63.9
22 TraesCS3D01G014500 chr3A 89.128 2226 202 23 1014 3219 11002147 10999942 0.000000e+00 2734.0
23 TraesCS3D01G014500 chr3A 87.990 1557 168 13 2023 3575 11410154 11408613 0.000000e+00 1821.0
24 TraesCS3D01G014500 chr3A 85.403 459 58 5 997 1455 11464836 11464387 6.440000e-128 468.0
25 TraesCS3D01G014500 chr3A 85.920 348 27 11 3663 3996 11408545 11408206 6.760000e-93 351.0
26 TraesCS3D01G014500 chr3A 88.421 190 20 2 4055 4244 11408179 11407992 1.190000e-55 228.0
27 TraesCS3D01G014500 chr3A 83.544 237 21 4 1448 1684 11459161 11458943 5.570000e-49 206.0
28 TraesCS3D01G014500 chr3A 92.982 114 8 0 3770 3883 10950890 10950777 2.630000e-37 167.0
29 TraesCS3D01G014500 chr3B 86.130 1305 166 11 2119 3421 13966267 13967558 0.000000e+00 1393.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G014500 chr3D 5004923 5009174 4251 True 7853.000 7853 100.000000 1 4252 1 chr3D.!!$R2 4251
1 TraesCS3D01G014500 chr3D 4966102 4967399 1297 True 1485.000 1485 87.366000 2122 3421 1 chr3D.!!$R1 1299
2 TraesCS3D01G014500 chr3D 5026729 5027627 898 True 542.000 542 78.317000 604 1497 1 chr3D.!!$R3 893
3 TraesCS3D01G014500 chrUn 296500215 296501505 1290 True 1365.000 1365 85.747000 2119 3421 1 chrUn.!!$R1 1302
4 TraesCS3D01G014500 chrUn 35314842 35316010 1168 False 1356.000 1356 87.573000 488 1681 1 chrUn.!!$F2 1193
5 TraesCS3D01G014500 chrUn 36342595 36347238 4643 False 1073.975 3832 91.655750 174 3883 4 chrUn.!!$F3 3709
6 TraesCS3D01G014500 chrUn 214887767 214892410 4643 True 1073.975 3832 91.690000 174 3883 4 chrUn.!!$R2 3709
7 TraesCS3D01G014500 chrUn 238784738 238786661 1923 False 862.000 1467 86.691000 2122 4252 2 chrUn.!!$F4 2130
8 TraesCS3D01G014500 chrUn 240349613 240351536 1923 True 862.000 1467 86.691000 2122 4252 2 chrUn.!!$R3 2130
9 TraesCS3D01G014500 chrUn 34655321 34656455 1134 False 651.000 651 77.768000 604 1762 1 chrUn.!!$F1 1158
10 TraesCS3D01G014500 chr3A 10999942 11002147 2205 True 2734.000 2734 89.128000 1014 3219 1 chr3A.!!$R2 2205
11 TraesCS3D01G014500 chr3A 11407992 11410154 2162 True 800.000 1821 87.443667 2023 4244 3 chr3A.!!$R5 2221
12 TraesCS3D01G014500 chr3B 13966267 13967558 1291 False 1393.000 1393 86.130000 2119 3421 1 chr3B.!!$F1 1302

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
162 163 0.035056 CTGGCGGTGATCCTCCTTTT 60.035 55.0 0.0 0.0 39.22 2.27 F
163 164 0.035439 TGGCGGTGATCCTCCTTTTC 60.035 55.0 0.0 0.0 39.22 2.29 F
1348 1389 0.037232 GAATCGGCCTCCCTATTCCG 60.037 60.0 0.0 0.0 37.34 4.30 F
2179 2231 0.911769 TTGATCTTCCTCGCCCACAT 59.088 50.0 0.0 0.0 0.00 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1302 1343 0.179097 GTAGAGGGCAGCTGCTGTAC 60.179 60.0 35.82 25.04 41.70 2.90 R
2016 2067 0.729116 CGGAACTACCAGCAATGCAG 59.271 55.0 8.35 0.00 38.90 4.41 R
2870 2924 0.325671 TTCTTCCTCCGGCCATCTCT 60.326 55.0 2.24 0.00 0.00 3.10 R
3947 4276 0.037790 GAGACACTGGACTGCAGGTC 60.038 60.0 19.93 14.01 43.79 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.667519 GGTGTTTAGTCATCCGTCCTAT 57.332 45.455 0.00 0.00 0.00 2.57
22 23 5.019785 GGTGTTTAGTCATCCGTCCTATT 57.980 43.478 0.00 0.00 0.00 1.73
23 24 5.425630 GGTGTTTAGTCATCCGTCCTATTT 58.574 41.667 0.00 0.00 0.00 1.40
24 25 5.878669 GGTGTTTAGTCATCCGTCCTATTTT 59.121 40.000 0.00 0.00 0.00 1.82
25 26 6.036844 GGTGTTTAGTCATCCGTCCTATTTTC 59.963 42.308 0.00 0.00 0.00 2.29
26 27 5.808540 TGTTTAGTCATCCGTCCTATTTTCG 59.191 40.000 0.00 0.00 0.00 3.46
27 28 2.822764 AGTCATCCGTCCTATTTTCGC 58.177 47.619 0.00 0.00 0.00 4.70
28 29 2.431057 AGTCATCCGTCCTATTTTCGCT 59.569 45.455 0.00 0.00 0.00 4.93
29 30 2.540101 GTCATCCGTCCTATTTTCGCTG 59.460 50.000 0.00 0.00 0.00 5.18
30 31 1.867233 CATCCGTCCTATTTTCGCTGG 59.133 52.381 0.00 0.00 0.00 4.85
31 32 0.899720 TCCGTCCTATTTTCGCTGGT 59.100 50.000 0.00 0.00 0.00 4.00
32 33 1.276989 TCCGTCCTATTTTCGCTGGTT 59.723 47.619 0.00 0.00 0.00 3.67
33 34 1.396996 CCGTCCTATTTTCGCTGGTTG 59.603 52.381 0.00 0.00 0.00 3.77
34 35 2.073816 CGTCCTATTTTCGCTGGTTGT 58.926 47.619 0.00 0.00 0.00 3.32
35 36 2.159707 CGTCCTATTTTCGCTGGTTGTG 60.160 50.000 0.00 0.00 0.00 3.33
36 37 2.161609 GTCCTATTTTCGCTGGTTGTGG 59.838 50.000 0.00 0.00 0.00 4.17
37 38 1.135402 CCTATTTTCGCTGGTTGTGGC 60.135 52.381 0.00 0.00 0.00 5.01
38 39 1.539388 CTATTTTCGCTGGTTGTGGCA 59.461 47.619 0.00 0.00 0.00 4.92
39 40 0.749649 ATTTTCGCTGGTTGTGGCAA 59.250 45.000 0.00 0.00 0.00 4.52
40 41 0.179124 TTTTCGCTGGTTGTGGCAAC 60.179 50.000 3.62 3.62 0.00 4.17
41 42 1.034838 TTTCGCTGGTTGTGGCAACT 61.035 50.000 11.13 0.00 37.61 3.16
42 43 1.034838 TTCGCTGGTTGTGGCAACTT 61.035 50.000 11.13 0.00 37.61 2.66
43 44 1.034838 TCGCTGGTTGTGGCAACTTT 61.035 50.000 11.13 0.00 37.61 2.66
44 45 0.179113 CGCTGGTTGTGGCAACTTTT 60.179 50.000 11.13 0.00 37.61 2.27
45 46 1.570813 GCTGGTTGTGGCAACTTTTC 58.429 50.000 11.13 0.00 37.61 2.29
46 47 1.806247 GCTGGTTGTGGCAACTTTTCC 60.806 52.381 11.13 0.00 37.61 3.13
47 48 0.827368 TGGTTGTGGCAACTTTTCCC 59.173 50.000 11.13 0.00 37.61 3.97
48 49 1.119684 GGTTGTGGCAACTTTTCCCT 58.880 50.000 11.13 0.00 37.61 4.20
49 50 1.484653 GGTTGTGGCAACTTTTCCCTT 59.515 47.619 11.13 0.00 37.61 3.95
50 51 2.093181 GGTTGTGGCAACTTTTCCCTTT 60.093 45.455 11.13 0.00 37.61 3.11
51 52 3.605634 GTTGTGGCAACTTTTCCCTTTT 58.394 40.909 4.91 0.00 37.61 2.27
52 53 3.990959 TGTGGCAACTTTTCCCTTTTT 57.009 38.095 0.00 0.00 37.61 1.94
84 85 2.949106 GCTTTGAGCGAGCTTGCA 59.051 55.556 27.59 5.19 37.18 4.08
85 86 1.441682 GCTTTGAGCGAGCTTGCAC 60.442 57.895 27.59 21.64 37.18 4.57
86 87 1.849976 GCTTTGAGCGAGCTTGCACT 61.850 55.000 27.59 8.17 37.18 4.40
87 88 1.432514 CTTTGAGCGAGCTTGCACTA 58.567 50.000 27.59 15.61 37.31 2.74
88 89 1.392853 CTTTGAGCGAGCTTGCACTAG 59.607 52.381 27.59 17.44 37.31 2.57
89 90 0.603065 TTGAGCGAGCTTGCACTAGA 59.397 50.000 27.59 9.25 37.31 2.43
90 91 0.109086 TGAGCGAGCTTGCACTAGAC 60.109 55.000 27.59 11.43 37.31 2.59
91 92 0.804156 GAGCGAGCTTGCACTAGACC 60.804 60.000 27.59 4.15 37.31 3.85
92 93 2.161486 GCGAGCTTGCACTAGACCG 61.161 63.158 21.53 0.00 34.15 4.79
93 94 2.161486 CGAGCTTGCACTAGACCGC 61.161 63.158 0.00 0.00 0.00 5.68
94 95 1.079819 GAGCTTGCACTAGACCGCA 60.080 57.895 0.00 0.00 36.05 5.69
95 96 1.079543 AGCTTGCACTAGACCGCAG 60.080 57.895 0.00 0.00 39.75 5.18
96 97 1.079819 GCTTGCACTAGACCGCAGA 60.080 57.895 0.00 0.00 39.75 4.26
97 98 1.355066 GCTTGCACTAGACCGCAGAC 61.355 60.000 0.00 0.00 39.75 3.51
98 99 0.244994 CTTGCACTAGACCGCAGACT 59.755 55.000 0.00 0.00 39.75 3.24
99 100 0.679505 TTGCACTAGACCGCAGACTT 59.320 50.000 0.00 0.00 39.75 3.01
100 101 0.679505 TGCACTAGACCGCAGACTTT 59.320 50.000 0.00 0.00 33.34 2.66
101 102 1.070134 TGCACTAGACCGCAGACTTTT 59.930 47.619 0.00 0.00 33.34 2.27
102 103 1.727335 GCACTAGACCGCAGACTTTTC 59.273 52.381 0.00 0.00 0.00 2.29
103 104 1.986378 CACTAGACCGCAGACTTTTCG 59.014 52.381 0.00 0.00 0.00 3.46
105 106 1.201647 CTAGACCGCAGACTTTTCGGA 59.798 52.381 12.83 0.00 45.53 4.55
106 107 0.608640 AGACCGCAGACTTTTCGGAT 59.391 50.000 12.83 1.20 45.53 4.18
107 108 1.822990 AGACCGCAGACTTTTCGGATA 59.177 47.619 12.83 0.00 45.53 2.59
108 109 1.925185 GACCGCAGACTTTTCGGATAC 59.075 52.381 12.83 3.06 45.53 2.24
109 110 1.549170 ACCGCAGACTTTTCGGATACT 59.451 47.619 12.83 0.00 45.53 2.12
110 111 2.028385 ACCGCAGACTTTTCGGATACTT 60.028 45.455 12.83 0.00 45.53 2.24
111 112 3.000727 CCGCAGACTTTTCGGATACTTT 58.999 45.455 2.30 0.00 45.53 2.66
112 113 3.181520 CCGCAGACTTTTCGGATACTTTG 60.182 47.826 2.30 0.00 45.53 2.77
113 114 3.725010 CGCAGACTTTTCGGATACTTTGC 60.725 47.826 0.00 0.00 0.00 3.68
114 115 3.437049 GCAGACTTTTCGGATACTTTGCT 59.563 43.478 0.00 0.00 0.00 3.91
115 116 4.670221 GCAGACTTTTCGGATACTTTGCTG 60.670 45.833 0.00 0.00 0.00 4.41
116 117 3.437049 AGACTTTTCGGATACTTTGCTGC 59.563 43.478 0.00 0.00 0.00 5.25
117 118 3.146066 ACTTTTCGGATACTTTGCTGCA 58.854 40.909 0.00 0.00 0.00 4.41
118 119 3.058224 ACTTTTCGGATACTTTGCTGCAC 60.058 43.478 0.00 0.00 0.00 4.57
119 120 1.075542 TTCGGATACTTTGCTGCACG 58.924 50.000 0.00 0.34 0.00 5.34
120 121 1.060937 CGGATACTTTGCTGCACGC 59.939 57.895 0.00 1.70 39.77 5.34
128 129 4.190350 TGCTGCACGCATCACTAG 57.810 55.556 0.00 0.00 45.47 2.57
129 130 2.102438 TGCTGCACGCATCACTAGC 61.102 57.895 0.00 0.00 45.47 3.42
130 131 1.812922 GCTGCACGCATCACTAGCT 60.813 57.895 0.00 0.00 38.92 3.32
131 132 1.364626 GCTGCACGCATCACTAGCTT 61.365 55.000 0.00 0.00 38.92 3.74
132 133 1.081892 CTGCACGCATCACTAGCTTT 58.918 50.000 0.00 0.00 0.00 3.51
133 134 0.798159 TGCACGCATCACTAGCTTTG 59.202 50.000 0.00 0.00 0.00 2.77
134 135 1.078709 GCACGCATCACTAGCTTTGA 58.921 50.000 0.00 0.00 0.00 2.69
135 136 1.667724 GCACGCATCACTAGCTTTGAT 59.332 47.619 0.00 0.00 33.81 2.57
143 144 6.225703 CATCACTAGCTTTGATGTAGATGC 57.774 41.667 21.72 0.00 43.65 3.91
144 145 5.604758 TCACTAGCTTTGATGTAGATGCT 57.395 39.130 0.00 0.00 34.92 3.79
145 146 5.354767 TCACTAGCTTTGATGTAGATGCTG 58.645 41.667 0.00 0.00 32.72 4.41
146 147 4.510711 CACTAGCTTTGATGTAGATGCTGG 59.489 45.833 0.00 0.00 35.62 4.85
147 148 2.295885 AGCTTTGATGTAGATGCTGGC 58.704 47.619 0.00 0.00 0.00 4.85
148 149 1.003116 GCTTTGATGTAGATGCTGGCG 60.003 52.381 0.00 0.00 0.00 5.69
149 150 1.600957 CTTTGATGTAGATGCTGGCGG 59.399 52.381 0.00 0.00 0.00 6.13
150 151 0.541392 TTGATGTAGATGCTGGCGGT 59.459 50.000 0.00 0.00 0.00 5.68
151 152 0.179076 TGATGTAGATGCTGGCGGTG 60.179 55.000 0.00 0.00 0.00 4.94
152 153 0.104855 GATGTAGATGCTGGCGGTGA 59.895 55.000 0.00 0.00 0.00 4.02
153 154 0.761187 ATGTAGATGCTGGCGGTGAT 59.239 50.000 0.00 0.00 0.00 3.06
154 155 0.104855 TGTAGATGCTGGCGGTGATC 59.895 55.000 0.00 0.00 0.00 2.92
155 156 0.601311 GTAGATGCTGGCGGTGATCC 60.601 60.000 0.00 0.00 0.00 3.36
156 157 0.760567 TAGATGCTGGCGGTGATCCT 60.761 55.000 0.00 0.00 0.00 3.24
157 158 1.596477 GATGCTGGCGGTGATCCTC 60.596 63.158 0.00 0.00 0.00 3.71
158 159 3.112205 ATGCTGGCGGTGATCCTCC 62.112 63.158 0.00 0.00 38.96 4.30
159 160 3.474570 GCTGGCGGTGATCCTCCT 61.475 66.667 0.00 0.00 39.22 3.69
160 161 3.036429 GCTGGCGGTGATCCTCCTT 62.036 63.158 0.00 0.00 39.22 3.36
161 162 1.604378 CTGGCGGTGATCCTCCTTT 59.396 57.895 0.00 0.00 39.22 3.11
162 163 0.035056 CTGGCGGTGATCCTCCTTTT 60.035 55.000 0.00 0.00 39.22 2.27
163 164 0.035439 TGGCGGTGATCCTCCTTTTC 60.035 55.000 0.00 0.00 39.22 2.29
164 165 0.253327 GGCGGTGATCCTCCTTTTCT 59.747 55.000 0.00 0.00 35.82 2.52
165 166 1.485066 GGCGGTGATCCTCCTTTTCTA 59.515 52.381 0.00 0.00 35.82 2.10
166 167 2.093128 GGCGGTGATCCTCCTTTTCTAA 60.093 50.000 0.00 0.00 35.82 2.10
167 168 3.606687 GCGGTGATCCTCCTTTTCTAAA 58.393 45.455 0.00 0.00 0.00 1.85
168 169 4.007659 GCGGTGATCCTCCTTTTCTAAAA 58.992 43.478 0.00 0.00 0.00 1.52
169 170 4.095036 GCGGTGATCCTCCTTTTCTAAAAG 59.905 45.833 8.00 8.00 43.82 2.27
170 171 5.488341 CGGTGATCCTCCTTTTCTAAAAGA 58.512 41.667 15.16 3.02 46.39 2.52
171 172 5.938125 CGGTGATCCTCCTTTTCTAAAAGAA 59.062 40.000 15.16 0.00 46.39 2.52
172 173 6.430000 CGGTGATCCTCCTTTTCTAAAAGAAA 59.570 38.462 15.16 1.37 46.39 2.52
179 180 8.638873 TCCTCCTTTTCTAAAAGAAAACCATTC 58.361 33.333 15.16 0.00 45.99 2.67
188 189 2.863809 AGAAAACCATTCGCAGAGGTT 58.136 42.857 0.00 0.00 45.30 3.50
196 197 3.057315 CCATTCGCAGAGGTTTGAATTGT 60.057 43.478 0.00 0.00 38.43 2.71
208 209 7.721399 AGAGGTTTGAATTGTGATAAGACTTGT 59.279 33.333 0.00 0.00 0.00 3.16
212 213 9.173939 GTTTGAATTGTGATAAGACTTGTTGAG 57.826 33.333 0.00 0.00 0.00 3.02
236 237 7.264221 AGTTGTTGTGATAACAGCAAAATTGA 58.736 30.769 13.56 0.00 41.22 2.57
250 251 4.504097 GCAAAATTGAAGTCCAGTCACAAC 59.496 41.667 0.00 0.00 0.00 3.32
255 256 3.732212 TGAAGTCCAGTCACAACATCAG 58.268 45.455 0.00 0.00 0.00 2.90
257 258 3.393089 AGTCCAGTCACAACATCAGAC 57.607 47.619 0.00 0.00 0.00 3.51
261 263 5.188555 AGTCCAGTCACAACATCAGACATAT 59.811 40.000 0.00 0.00 34.80 1.78
266 268 7.094677 CCAGTCACAACATCAGACATATTTGAA 60.095 37.037 0.00 0.00 34.80 2.69
297 299 5.904362 ATGGAAATGCTTTCAGTTAGTCC 57.096 39.130 9.75 1.86 41.43 3.85
318 320 5.299531 GTCCTGTAAAGAAAAAGCTTCCACT 59.700 40.000 0.00 0.00 0.00 4.00
319 321 5.891551 TCCTGTAAAGAAAAAGCTTCCACTT 59.108 36.000 0.00 2.82 0.00 3.16
320 322 7.012989 GTCCTGTAAAGAAAAAGCTTCCACTTA 59.987 37.037 0.00 0.00 0.00 2.24
321 323 7.724061 TCCTGTAAAGAAAAAGCTTCCACTTAT 59.276 33.333 0.00 0.82 0.00 1.73
356 358 1.019278 TTCTTTCAGTCGGATGCGGC 61.019 55.000 1.74 1.74 0.00 6.53
368 370 2.349817 CGGATGCGGCTTAAATGATGTC 60.350 50.000 0.00 0.00 0.00 3.06
369 371 2.880890 GGATGCGGCTTAAATGATGTCT 59.119 45.455 0.00 0.00 0.00 3.41
396 398 8.972458 TTATAAGTTGTATAATCTGCAGGCAA 57.028 30.769 15.13 7.18 0.00 4.52
397 399 9.573166 TTATAAGTTGTATAATCTGCAGGCAAT 57.427 29.630 15.13 7.31 0.00 3.56
398 400 5.762825 AGTTGTATAATCTGCAGGCAATG 57.237 39.130 15.13 0.00 0.00 2.82
399 401 4.581824 AGTTGTATAATCTGCAGGCAATGG 59.418 41.667 15.13 0.00 0.00 3.16
400 402 4.436113 TGTATAATCTGCAGGCAATGGA 57.564 40.909 15.13 0.00 0.00 3.41
401 403 4.790937 TGTATAATCTGCAGGCAATGGAA 58.209 39.130 15.13 0.00 0.00 3.53
402 404 5.199723 TGTATAATCTGCAGGCAATGGAAA 58.800 37.500 15.13 0.00 0.00 3.13
403 405 5.655974 TGTATAATCTGCAGGCAATGGAAAA 59.344 36.000 15.13 0.00 0.00 2.29
404 406 3.323751 AATCTGCAGGCAATGGAAAAC 57.676 42.857 15.13 0.00 0.00 2.43
405 407 1.702182 TCTGCAGGCAATGGAAAACA 58.298 45.000 15.13 0.00 0.00 2.83
406 408 2.250031 TCTGCAGGCAATGGAAAACAT 58.750 42.857 15.13 0.00 43.07 2.71
407 409 2.028839 TCTGCAGGCAATGGAAAACATG 60.029 45.455 15.13 0.00 40.44 3.21
408 410 1.002201 TGCAGGCAATGGAAAACATGG 59.998 47.619 0.00 0.00 40.44 3.66
409 411 1.002315 GCAGGCAATGGAAAACATGGT 59.998 47.619 0.00 0.00 40.44 3.55
410 412 2.550639 GCAGGCAATGGAAAACATGGTT 60.551 45.455 0.00 0.00 40.44 3.67
411 413 3.742385 CAGGCAATGGAAAACATGGTTT 58.258 40.909 8.88 8.88 40.44 3.27
412 414 3.499157 CAGGCAATGGAAAACATGGTTTG 59.501 43.478 14.80 0.00 40.44 2.93
413 415 3.390639 AGGCAATGGAAAACATGGTTTGA 59.609 39.130 14.80 0.00 40.44 2.69
414 416 4.133078 GGCAATGGAAAACATGGTTTGAA 58.867 39.130 14.80 1.33 40.44 2.69
415 417 4.213906 GGCAATGGAAAACATGGTTTGAAG 59.786 41.667 14.80 0.15 40.44 3.02
445 447 0.972471 GGCAATGGAAACCAGGGGAG 60.972 60.000 0.00 0.00 36.75 4.30
455 457 4.401925 GAAACCAGGGGAGATATCAATGG 58.598 47.826 5.32 7.65 0.00 3.16
457 459 3.680169 ACCAGGGGAGATATCAATGGAA 58.320 45.455 5.32 0.00 0.00 3.53
458 460 4.054369 ACCAGGGGAGATATCAATGGAAA 58.946 43.478 5.32 0.00 0.00 3.13
459 461 4.141158 ACCAGGGGAGATATCAATGGAAAC 60.141 45.833 5.32 0.00 0.00 2.78
460 462 4.401925 CAGGGGAGATATCAATGGAAACC 58.598 47.826 5.32 0.00 0.00 3.27
461 463 4.054369 AGGGGAGATATCAATGGAAACCA 58.946 43.478 5.32 0.00 38.19 3.67
462 464 4.105377 AGGGGAGATATCAATGGAAACCAG 59.895 45.833 5.32 0.00 36.75 4.00
463 465 4.401925 GGGAGATATCAATGGAAACCAGG 58.598 47.826 5.32 0.00 36.75 4.45
464 466 4.401925 GGAGATATCAATGGAAACCAGGG 58.598 47.826 5.32 0.00 36.75 4.45
465 467 4.401925 GAGATATCAATGGAAACCAGGGG 58.598 47.826 5.32 0.00 36.75 4.79
478 480 1.212935 ACCAGGGGACATAATCTGCAC 59.787 52.381 0.00 0.00 0.00 4.57
484 486 1.665679 GGACATAATCTGCACGTGGTG 59.334 52.381 18.88 0.00 36.51 4.17
523 525 6.181190 GGAATTAGTTTCATATAGGAGGGGC 58.819 44.000 0.00 0.00 35.94 5.80
526 528 6.841781 TTAGTTTCATATAGGAGGGGCTTT 57.158 37.500 0.00 0.00 0.00 3.51
579 583 4.576216 TGAGGATTCGATCAGACTTAGC 57.424 45.455 0.00 0.00 0.00 3.09
588 592 4.707448 TCGATCAGACTTAGCTTTTCCTCT 59.293 41.667 0.00 0.00 0.00 3.69
631 641 6.980051 AACCGGTAAACTCAATATCTCAAC 57.020 37.500 8.00 0.00 0.00 3.18
700 713 3.641437 TTTTCTCAAGGCACCGAATTG 57.359 42.857 0.00 0.00 0.00 2.32
737 751 3.329225 TGGACATGATTGGACCAGTACAA 59.671 43.478 0.00 0.00 37.88 2.41
777 791 6.605594 ACAATTGGACTCTTCTGTTAACCAAA 59.394 34.615 10.83 0.00 38.95 3.28
782 796 6.126710 TGGACTCTTCTGTTAACCAAAAGGTA 60.127 38.462 2.48 0.00 0.00 3.08
846 872 5.244189 TGGTATGCACCCAACTTTAGTTA 57.756 39.130 4.48 0.00 45.11 2.24
849 875 2.147958 TGCACCCAACTTTAGTTAGCG 58.852 47.619 0.00 0.00 36.32 4.26
903 930 3.003482 CACGGTCATGTAGAGGTACTAGC 59.997 52.174 0.00 0.00 41.55 3.42
913 940 3.850752 AGAGGTACTAGCTGGCATGTAT 58.149 45.455 0.00 0.00 41.55 2.29
914 941 4.999310 AGAGGTACTAGCTGGCATGTATA 58.001 43.478 0.00 0.00 41.55 1.47
974 1003 2.012673 GCCACTCACTTATTCAGCCAG 58.987 52.381 0.00 0.00 0.00 4.85
995 1036 0.732538 CATCTGCGCGTCTGTGTGTA 60.733 55.000 8.43 0.00 0.00 2.90
1178 1219 3.480133 ACCTGGGTGCGGCTATCC 61.480 66.667 0.00 1.21 0.00 2.59
1194 1235 4.252073 GCTATCCATCTTATGAGCTGGTG 58.748 47.826 7.20 1.72 39.63 4.17
1206 1247 0.390340 AGCTGGTGTGCAGTGATACG 60.390 55.000 0.00 0.00 34.99 3.06
1240 1281 2.344441 CACATCGACAACGTGACATACC 59.656 50.000 0.00 0.00 40.69 2.73
1302 1343 1.298602 TCGATGCCGACATGGATTTG 58.701 50.000 0.00 0.00 42.00 2.32
1343 1384 1.764854 GGTGGAATCGGCCTCCCTA 60.765 63.158 7.04 0.00 35.93 3.53
1348 1389 0.037232 GAATCGGCCTCCCTATTCCG 60.037 60.000 0.00 0.00 37.34 4.30
1351 1392 2.735237 GGCCTCCCTATTCCGTCG 59.265 66.667 0.00 0.00 0.00 5.12
1352 1393 1.831286 GGCCTCCCTATTCCGTCGA 60.831 63.158 0.00 0.00 0.00 4.20
1360 1401 2.569059 CCTATTCCGTCGAGGTAGTCA 58.431 52.381 4.18 0.00 41.99 3.41
1405 1446 1.263356 CCCCCTTTCACGTAGACAGA 58.737 55.000 0.00 0.00 0.00 3.41
1675 1716 1.988293 TGCCGTTCAATTCCCTTTCA 58.012 45.000 0.00 0.00 0.00 2.69
1677 1718 2.159382 GCCGTTCAATTCCCTTTCAGA 58.841 47.619 0.00 0.00 0.00 3.27
1681 1722 5.278022 GCCGTTCAATTCCCTTTCAGATATC 60.278 44.000 0.00 0.00 0.00 1.63
1682 1723 5.239525 CCGTTCAATTCCCTTTCAGATATCC 59.760 44.000 0.00 0.00 0.00 2.59
1683 1724 6.058183 CGTTCAATTCCCTTTCAGATATCCT 58.942 40.000 0.00 0.00 0.00 3.24
1684 1725 6.543831 CGTTCAATTCCCTTTCAGATATCCTT 59.456 38.462 0.00 0.00 0.00 3.36
1685 1726 7.067494 CGTTCAATTCCCTTTCAGATATCCTTT 59.933 37.037 0.00 0.00 0.00 3.11
1686 1727 8.753133 GTTCAATTCCCTTTCAGATATCCTTTT 58.247 33.333 0.00 0.00 0.00 2.27
1687 1728 8.525290 TCAATTCCCTTTCAGATATCCTTTTC 57.475 34.615 0.00 0.00 0.00 2.29
1688 1729 8.115384 TCAATTCCCTTTCAGATATCCTTTTCA 58.885 33.333 0.00 0.00 0.00 2.69
1689 1730 8.411683 CAATTCCCTTTCAGATATCCTTTTCAG 58.588 37.037 0.00 0.00 0.00 3.02
1690 1731 6.006275 TCCCTTTCAGATATCCTTTTCAGG 57.994 41.667 0.00 0.00 42.50 3.86
1691 1732 5.492524 TCCCTTTCAGATATCCTTTTCAGGT 59.507 40.000 0.00 0.00 41.69 4.00
1694 1735 6.541641 CCTTTCAGATATCCTTTTCAGGTGAG 59.458 42.308 0.00 0.00 41.69 3.51
1700 1741 1.988107 TCCTTTTCAGGTGAGGAGCAT 59.012 47.619 0.00 0.00 41.69 3.79
1742 1786 1.269621 ACTCCAGTTTCGGTGAGTTCG 60.270 52.381 0.00 0.00 34.53 3.95
1781 1828 7.390823 TGTATAGAGTGGTTCTGTTTATTGCA 58.609 34.615 0.00 0.00 36.61 4.08
1788 1835 7.985476 AGTGGTTCTGTTTATTGCATGTATAC 58.015 34.615 0.00 0.00 0.00 1.47
1792 1839 7.413657 GGTTCTGTTTATTGCATGTATACGTGT 60.414 37.037 22.87 8.95 35.38 4.49
1793 1840 8.597227 GTTCTGTTTATTGCATGTATACGTGTA 58.403 33.333 22.87 17.52 35.38 2.90
1795 1842 9.968870 TCTGTTTATTGCATGTATACGTGTATA 57.031 29.630 22.87 17.57 35.38 1.47
1823 1870 1.333619 CTGTCTTGTCCCAAAACCGTG 59.666 52.381 0.00 0.00 0.00 4.94
1831 1879 2.437002 CAAAACCGTGGGCCCCTA 59.563 61.111 22.27 0.00 0.00 3.53
1837 1885 1.152963 CCGTGGGCCCCTATTTCAG 60.153 63.158 22.27 0.95 0.00 3.02
1869 1917 2.236146 TCTCGTTGGATGGTATTGCAGT 59.764 45.455 0.00 0.00 0.00 4.40
1872 1920 2.746904 CGTTGGATGGTATTGCAGTGAA 59.253 45.455 0.00 0.00 0.00 3.18
1875 1923 5.343249 GTTGGATGGTATTGCAGTGAATTC 58.657 41.667 0.00 0.00 0.00 2.17
1895 1943 2.061773 CTCGCAAGTGTGTAGTGAAGG 58.938 52.381 0.00 0.00 39.48 3.46
1901 1949 1.618837 AGTGTGTAGTGAAGGCGTCAT 59.381 47.619 6.37 0.00 38.90 3.06
1902 1950 1.726791 GTGTGTAGTGAAGGCGTCATG 59.273 52.381 6.37 0.00 38.90 3.07
1904 1952 2.036604 TGTGTAGTGAAGGCGTCATGAA 59.963 45.455 6.37 0.00 38.90 2.57
1913 1961 2.783135 AGGCGTCATGAATTGTGTTCT 58.217 42.857 0.00 0.00 0.00 3.01
1915 1963 2.414559 GGCGTCATGAATTGTGTTCTGG 60.415 50.000 0.00 0.00 0.00 3.86
1916 1964 2.855180 CGTCATGAATTGTGTTCTGGC 58.145 47.619 0.00 0.00 0.00 4.85
1924 1975 5.426504 TGAATTGTGTTCTGGCAATTTTGT 58.573 33.333 0.00 0.00 42.99 2.83
1933 1984 3.057596 TCTGGCAATTTTGTTCGATGGAC 60.058 43.478 0.00 0.00 0.00 4.02
1934 1985 2.029470 TGGCAATTTTGTTCGATGGACC 60.029 45.455 0.00 0.00 0.00 4.46
1935 1986 2.606108 GCAATTTTGTTCGATGGACCC 58.394 47.619 0.00 0.00 0.00 4.46
1954 2005 2.567615 CCCTTCTGGTACTGCTTAGTGT 59.432 50.000 0.00 0.00 0.00 3.55
1955 2006 3.767673 CCCTTCTGGTACTGCTTAGTGTA 59.232 47.826 0.00 0.00 0.00 2.90
1976 2027 3.940209 TGCAACTGGATTTGGTGATTC 57.060 42.857 0.00 0.00 0.00 2.52
1978 2029 4.661222 TGCAACTGGATTTGGTGATTCTA 58.339 39.130 0.00 0.00 0.00 2.10
1988 2039 6.261826 GGATTTGGTGATTCTACCTCATCAAG 59.738 42.308 0.00 0.00 42.82 3.02
1994 2045 6.283694 GTGATTCTACCTCATCAAGCATACA 58.716 40.000 0.00 0.00 31.14 2.29
1997 2048 7.658982 TGATTCTACCTCATCAAGCATACAATC 59.341 37.037 0.00 0.00 0.00 2.67
2006 2057 4.433615 TCAAGCATACAATCCGTCTTCTC 58.566 43.478 0.00 0.00 0.00 2.87
2009 2060 3.119101 AGCATACAATCCGTCTTCTCGTT 60.119 43.478 0.00 0.00 0.00 3.85
2016 2067 2.466846 TCCGTCTTCTCGTTTGTCAAC 58.533 47.619 0.00 0.00 0.00 3.18
2019 2070 2.347661 CGTCTTCTCGTTTGTCAACTGC 60.348 50.000 0.00 0.00 0.00 4.40
2030 2081 2.153645 TGTCAACTGCATTGCTGGTAG 58.846 47.619 18.21 6.35 38.29 3.18
2034 2085 1.826385 ACTGCATTGCTGGTAGTTCC 58.174 50.000 18.21 0.00 0.00 3.62
2048 2099 2.839486 AGTTCCGAATGTTCTGCTCA 57.161 45.000 0.00 0.00 0.00 4.26
2055 2106 4.035558 TCCGAATGTTCTGCTCATAATTGC 59.964 41.667 0.00 0.00 0.00 3.56
2078 2129 6.758416 TGCAGTTACTTCATCATCACATCTAC 59.242 38.462 0.00 0.00 0.00 2.59
2109 2160 2.360230 ACCCACCCACCAAACCTATAA 58.640 47.619 0.00 0.00 0.00 0.98
2179 2231 0.911769 TTGATCTTCCTCGCCCACAT 59.088 50.000 0.00 0.00 0.00 3.21
2201 2253 3.930229 TGTATTGGAAAACGAGGATCACG 59.070 43.478 9.40 9.40 33.17 4.35
2282 2334 1.896220 ACACCGACATCACAGCAATT 58.104 45.000 0.00 0.00 0.00 2.32
2288 2340 3.436704 CCGACATCACAGCAATTACAAGT 59.563 43.478 0.00 0.00 0.00 3.16
2343 2395 1.747206 GCTCTGTGTTCAAGGGTGTGT 60.747 52.381 0.00 0.00 0.00 3.72
2465 2517 2.453080 CATCATGTTAATGTGGTGCGC 58.547 47.619 0.00 0.00 35.15 6.09
2504 2556 3.703556 CAGAGGAAATGAGGAGAGCACTA 59.296 47.826 0.00 0.00 0.00 2.74
2510 2562 6.385467 AGGAAATGAGGAGAGCACTAGTTTAT 59.615 38.462 0.00 0.00 0.00 1.40
2582 2634 2.567615 GAGTTTCTCCTGGGACAAGCTA 59.432 50.000 0.00 0.00 38.70 3.32
2588 2640 1.690219 CCTGGGACAAGCTAGCCGAT 61.690 60.000 12.13 0.00 38.70 4.18
2606 2658 2.553602 CGATATAGCTTTGGGCATTGCA 59.446 45.455 11.39 0.00 44.79 4.08
2744 2796 2.158667 CGCCAAACTATACCCAAGGGAT 60.159 50.000 13.15 0.00 38.96 3.85
2750 2802 4.976540 ACTATACCCAAGGGATAACAGC 57.023 45.455 13.15 0.00 38.96 4.40
2772 2824 0.975556 TGTGCCATCGAGAGCCCTAA 60.976 55.000 6.97 0.00 0.00 2.69
2870 2924 1.033746 GCTTTGGGATGCTGCTGCTA 61.034 55.000 17.00 3.79 40.48 3.49
2909 2963 1.679680 AGGAATGCTGATCCAAATGCG 59.320 47.619 5.92 0.00 39.55 4.73
3113 3176 1.299976 GGAAGGTGGCTTCGATGGT 59.700 57.895 0.00 0.00 34.37 3.55
3239 3302 9.985730 GATGAGATCTCAGATTCTTATGTTTCT 57.014 33.333 28.26 7.71 43.61 2.52
3241 3304 8.975295 TGAGATCTCAGATTCTTATGTTTCTCA 58.025 33.333 21.67 0.00 34.14 3.27
3245 3308 8.595362 TCTCAGATTCTTATGTTTCTCAGGTA 57.405 34.615 0.00 0.00 0.00 3.08
3246 3309 9.206690 TCTCAGATTCTTATGTTTCTCAGGTAT 57.793 33.333 0.00 0.00 0.00 2.73
3423 3505 6.580791 TGAAGTGTTATTTGCGCTTTTGTATC 59.419 34.615 9.73 0.00 36.89 2.24
3463 3644 1.036707 TTACAGTTTGTTGCTGCCCC 58.963 50.000 0.00 0.00 37.47 5.80
3464 3645 0.106469 TACAGTTTGTTGCTGCCCCA 60.106 50.000 0.00 0.00 37.47 4.96
3518 3699 9.777843 GAACTAATTTTGCATTCTTTGTAAACG 57.222 29.630 0.00 0.00 39.28 3.60
3519 3700 8.293114 ACTAATTTTGCATTCTTTGTAAACGG 57.707 30.769 0.00 0.00 39.28 4.44
3520 3701 5.590104 ATTTTGCATTCTTTGTAAACGGC 57.410 34.783 0.00 0.00 39.28 5.68
3585 3766 4.341783 GCACCTGGCTGGCTCAGT 62.342 66.667 10.71 0.00 40.22 3.41
3586 3767 2.359602 CACCTGGCTGGCTCAGTG 60.360 66.667 10.71 3.80 40.22 3.66
3588 3769 1.536418 ACCTGGCTGGCTCAGTGTA 60.536 57.895 10.71 0.00 40.22 2.90
3589 3770 0.911525 ACCTGGCTGGCTCAGTGTAT 60.912 55.000 10.71 0.00 40.22 2.29
3590 3771 0.463295 CCTGGCTGGCTCAGTGTATG 60.463 60.000 2.00 0.00 33.43 2.39
3591 3772 1.078214 TGGCTGGCTCAGTGTATGC 60.078 57.895 2.00 0.00 33.43 3.14
3597 3874 3.534554 CTGGCTCAGTGTATGCATGTTA 58.465 45.455 10.16 0.00 0.00 2.41
3598 3875 3.270027 TGGCTCAGTGTATGCATGTTAC 58.730 45.455 10.16 5.60 0.00 2.50
3617 3894 1.002087 ACCTTCCTCCTGTAGCAAACG 59.998 52.381 0.00 0.00 0.00 3.60
3633 3910 5.779922 AGCAAACGTACTCTTCTCAATGTA 58.220 37.500 0.00 0.00 0.00 2.29
3640 3917 6.827251 ACGTACTCTTCTCAATGTATGGACTA 59.173 38.462 0.00 0.00 0.00 2.59
3646 3923 5.474578 TCTCAATGTATGGACTATGGAGC 57.525 43.478 0.00 0.00 0.00 4.70
3667 3944 1.062587 GTTGAAGACGATTGCGGATGG 59.937 52.381 0.00 0.00 43.17 3.51
3668 3945 0.534873 TGAAGACGATTGCGGATGGA 59.465 50.000 0.00 0.00 43.17 3.41
3669 3946 0.931005 GAAGACGATTGCGGATGGAC 59.069 55.000 0.00 0.00 43.17 4.02
3679 3977 1.686587 TGCGGATGGACTCGTCATATT 59.313 47.619 0.00 0.00 0.00 1.28
3710 4008 1.073025 AACCTCATGCCGTGCTCAA 59.927 52.632 0.00 0.00 0.00 3.02
3711 4009 0.322816 AACCTCATGCCGTGCTCAAT 60.323 50.000 0.00 0.00 0.00 2.57
3731 4033 7.166473 GCTCAATTTTTATATTTCTGCTGACCG 59.834 37.037 0.00 0.00 0.00 4.79
3740 4042 1.040646 TCTGCTGACCGAGTTCTTGT 58.959 50.000 0.00 0.00 0.00 3.16
3794 4121 3.465122 GCAAATTGCTGCCAAAATGAG 57.535 42.857 11.19 0.00 40.96 2.90
3868 4195 4.041567 TCAGGGTAAGAAATTGAGCTGTGA 59.958 41.667 0.00 0.00 0.00 3.58
3883 4210 4.070716 AGCTGTGAAATTTCAGTCAGAGG 58.929 43.478 29.27 13.85 37.98 3.69
3884 4211 3.365767 GCTGTGAAATTTCAGTCAGAGGC 60.366 47.826 29.27 17.99 37.98 4.70
3885 4212 3.817084 CTGTGAAATTTCAGTCAGAGGCA 59.183 43.478 24.33 14.87 37.98 4.75
3886 4213 3.565482 TGTGAAATTTCAGTCAGAGGCAC 59.435 43.478 21.05 6.74 37.98 5.01
3890 4219 1.334160 TTTCAGTCAGAGGCACGGTA 58.666 50.000 0.00 0.00 0.00 4.02
3893 4222 0.532573 CAGTCAGAGGCACGGTACAT 59.467 55.000 0.00 0.00 0.00 2.29
3894 4223 0.532573 AGTCAGAGGCACGGTACATG 59.467 55.000 0.00 0.00 0.00 3.21
3904 4233 2.608261 GCACGGTACATGGATAGCTCTC 60.608 54.545 0.00 0.00 0.00 3.20
3924 4253 6.463190 GCTCTCTACCTTATCTCCGGAATTTT 60.463 42.308 5.23 0.00 0.00 1.82
3925 4254 6.817184 TCTCTACCTTATCTCCGGAATTTTG 58.183 40.000 5.23 0.00 0.00 2.44
3929 4258 4.018779 ACCTTATCTCCGGAATTTTGGTCA 60.019 41.667 5.23 0.00 0.00 4.02
3930 4259 4.576463 CCTTATCTCCGGAATTTTGGTCAG 59.424 45.833 5.23 0.00 0.00 3.51
3931 4260 3.721087 ATCTCCGGAATTTTGGTCAGT 57.279 42.857 5.23 0.00 0.00 3.41
3932 4261 2.778299 TCTCCGGAATTTTGGTCAGTG 58.222 47.619 5.23 0.00 0.00 3.66
3933 4262 2.105821 TCTCCGGAATTTTGGTCAGTGT 59.894 45.455 5.23 0.00 0.00 3.55
3934 4263 2.884639 CTCCGGAATTTTGGTCAGTGTT 59.115 45.455 5.23 0.00 0.00 3.32
3935 4264 2.882137 TCCGGAATTTTGGTCAGTGTTC 59.118 45.455 0.00 0.00 0.00 3.18
3936 4265 2.621055 CCGGAATTTTGGTCAGTGTTCA 59.379 45.455 0.00 0.00 0.00 3.18
3937 4266 3.255642 CCGGAATTTTGGTCAGTGTTCAT 59.744 43.478 0.00 0.00 0.00 2.57
3938 4267 4.229096 CGGAATTTTGGTCAGTGTTCATG 58.771 43.478 0.00 0.00 0.00 3.07
3939 4268 4.261572 CGGAATTTTGGTCAGTGTTCATGT 60.262 41.667 0.00 0.00 0.00 3.21
3940 4269 4.984161 GGAATTTTGGTCAGTGTTCATGTG 59.016 41.667 0.00 0.00 0.00 3.21
3941 4270 5.221224 GGAATTTTGGTCAGTGTTCATGTGA 60.221 40.000 0.00 0.00 0.00 3.58
3942 4271 4.898829 TTTTGGTCAGTGTTCATGTGAG 57.101 40.909 0.00 0.00 0.00 3.51
3943 4272 3.558931 TTGGTCAGTGTTCATGTGAGT 57.441 42.857 0.00 0.00 0.00 3.41
3944 4273 2.837498 TGGTCAGTGTTCATGTGAGTG 58.163 47.619 0.00 0.00 0.00 3.51
3945 4274 2.170397 TGGTCAGTGTTCATGTGAGTGT 59.830 45.455 0.00 0.00 0.00 3.55
3946 4275 3.386402 TGGTCAGTGTTCATGTGAGTGTA 59.614 43.478 0.00 0.00 0.00 2.90
3947 4276 3.990469 GGTCAGTGTTCATGTGAGTGTAG 59.010 47.826 0.00 0.00 0.00 2.74
3965 4305 2.053618 GACCTGCAGTCCAGTGTCT 58.946 57.895 13.81 0.00 39.84 3.41
3967 4307 1.080230 CCTGCAGTCCAGTGTCTCG 60.080 63.158 13.81 0.00 40.06 4.04
3974 4330 5.070685 TGCAGTCCAGTGTCTCGTATATAT 58.929 41.667 0.00 0.00 0.00 0.86
3975 4331 6.235664 TGCAGTCCAGTGTCTCGTATATATA 58.764 40.000 0.00 0.00 0.00 0.86
3976 4332 6.884836 TGCAGTCCAGTGTCTCGTATATATAT 59.115 38.462 0.00 0.00 0.00 0.86
3977 4333 7.148239 TGCAGTCCAGTGTCTCGTATATATATG 60.148 40.741 5.44 5.70 0.00 1.78
3978 4334 7.679875 GCAGTCCAGTGTCTCGTATATATATGG 60.680 44.444 11.28 5.51 0.00 2.74
3979 4335 7.553044 CAGTCCAGTGTCTCGTATATATATGGA 59.447 40.741 11.28 7.51 0.00 3.41
3980 4336 7.695820 GTCCAGTGTCTCGTATATATATGGAC 58.304 42.308 16.47 16.47 44.21 4.02
3981 4337 6.827251 TCCAGTGTCTCGTATATATATGGACC 59.173 42.308 19.90 14.82 0.00 4.46
3982 4338 6.602009 CCAGTGTCTCGTATATATATGGACCA 59.398 42.308 19.90 0.00 0.00 4.02
4004 4360 1.018226 GTAGTGGTCAGCAGCAGCAG 61.018 60.000 3.17 0.00 45.49 4.24
4010 4366 3.128188 CAGCAGCAGCAGCCTCAG 61.128 66.667 6.10 0.00 45.49 3.35
4041 4403 8.812972 AGGGTAAGAAAATTAAGTTGGATTTCC 58.187 33.333 0.00 0.00 31.91 3.13
4129 4495 6.064717 ACCTCAAAGTTCAGCAGAAAACTAT 58.935 36.000 0.00 0.00 34.71 2.12
4130 4496 6.547510 ACCTCAAAGTTCAGCAGAAAACTATT 59.452 34.615 0.00 0.00 34.71 1.73
4131 4497 7.080724 CCTCAAAGTTCAGCAGAAAACTATTC 58.919 38.462 0.00 0.00 34.71 1.75
4132 4498 7.040823 CCTCAAAGTTCAGCAGAAAACTATTCT 60.041 37.037 0.00 0.00 34.71 2.40
4133 4499 8.902540 TCAAAGTTCAGCAGAAAACTATTCTA 57.097 30.769 0.00 0.00 34.71 2.10
4136 4502 7.897575 AGTTCAGCAGAAAACTATTCTACAG 57.102 36.000 0.00 0.00 34.05 2.74
4171 4537 2.313172 CCTGCCGTGCATATCGCTC 61.313 63.158 0.00 0.00 43.06 5.03
4177 4543 1.195448 CCGTGCATATCGCTCCAATTC 59.805 52.381 0.00 0.00 43.06 2.17
4197 4563 1.132453 CCGAGTGCGATTGTAGACTCA 59.868 52.381 0.00 0.00 40.82 3.41
4202 4568 1.546029 TGCGATTGTAGACTCAGCTGT 59.454 47.619 14.67 0.00 0.00 4.40
4216 4582 4.778415 CTGTCGTCCAGTCCCGCG 62.778 72.222 0.00 0.00 36.37 6.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.667519 ATAGGACGGATGACTAAACACC 57.332 45.455 0.00 0.00 0.00 4.16
1 2 6.237755 CGAAAATAGGACGGATGACTAAACAC 60.238 42.308 0.00 0.00 0.00 3.32
2 3 5.808540 CGAAAATAGGACGGATGACTAAACA 59.191 40.000 0.00 0.00 0.00 2.83
3 4 5.276726 GCGAAAATAGGACGGATGACTAAAC 60.277 44.000 0.00 0.00 0.00 2.01
4 5 4.807304 GCGAAAATAGGACGGATGACTAAA 59.193 41.667 0.00 0.00 0.00 1.85
5 6 4.098960 AGCGAAAATAGGACGGATGACTAA 59.901 41.667 0.00 0.00 0.00 2.24
6 7 3.635373 AGCGAAAATAGGACGGATGACTA 59.365 43.478 0.00 0.00 0.00 2.59
7 8 2.431057 AGCGAAAATAGGACGGATGACT 59.569 45.455 0.00 0.00 0.00 3.41
8 9 2.540101 CAGCGAAAATAGGACGGATGAC 59.460 50.000 0.00 0.00 0.00 3.06
9 10 2.483013 CCAGCGAAAATAGGACGGATGA 60.483 50.000 0.00 0.00 0.00 2.92
10 11 1.867233 CCAGCGAAAATAGGACGGATG 59.133 52.381 0.00 0.00 0.00 3.51
11 12 1.485066 ACCAGCGAAAATAGGACGGAT 59.515 47.619 0.00 0.00 0.00 4.18
12 13 0.899720 ACCAGCGAAAATAGGACGGA 59.100 50.000 0.00 0.00 0.00 4.69
13 14 1.396996 CAACCAGCGAAAATAGGACGG 59.603 52.381 0.00 0.00 0.00 4.79
14 15 2.073816 ACAACCAGCGAAAATAGGACG 58.926 47.619 0.00 0.00 0.00 4.79
15 16 2.161609 CCACAACCAGCGAAAATAGGAC 59.838 50.000 0.00 0.00 0.00 3.85
16 17 2.432444 CCACAACCAGCGAAAATAGGA 58.568 47.619 0.00 0.00 0.00 2.94
17 18 1.135402 GCCACAACCAGCGAAAATAGG 60.135 52.381 0.00 0.00 0.00 2.57
18 19 1.539388 TGCCACAACCAGCGAAAATAG 59.461 47.619 0.00 0.00 0.00 1.73
19 20 1.610363 TGCCACAACCAGCGAAAATA 58.390 45.000 0.00 0.00 0.00 1.40
20 21 0.749649 TTGCCACAACCAGCGAAAAT 59.250 45.000 0.00 0.00 0.00 1.82
21 22 0.179124 GTTGCCACAACCAGCGAAAA 60.179 50.000 0.00 0.00 0.00 2.29
22 23 1.034838 AGTTGCCACAACCAGCGAAA 61.035 50.000 6.83 0.00 0.00 3.46
23 24 1.034838 AAGTTGCCACAACCAGCGAA 61.035 50.000 6.83 0.00 0.00 4.70
24 25 1.034838 AAAGTTGCCACAACCAGCGA 61.035 50.000 6.83 0.00 0.00 4.93
25 26 0.179113 AAAAGTTGCCACAACCAGCG 60.179 50.000 6.83 0.00 0.00 5.18
26 27 1.570813 GAAAAGTTGCCACAACCAGC 58.429 50.000 6.83 0.00 0.00 4.85
27 28 1.202521 GGGAAAAGTTGCCACAACCAG 60.203 52.381 6.83 0.00 41.41 4.00
28 29 0.827368 GGGAAAAGTTGCCACAACCA 59.173 50.000 6.83 0.00 41.41 3.67
29 30 1.119684 AGGGAAAAGTTGCCACAACC 58.880 50.000 6.83 0.00 44.70 3.77
30 31 2.979814 AAGGGAAAAGTTGCCACAAC 57.020 45.000 2.23 2.23 44.70 3.32
31 32 3.990959 AAAAGGGAAAAGTTGCCACAA 57.009 38.095 1.19 0.00 44.70 3.33
32 33 3.990959 AAAAAGGGAAAAGTTGCCACA 57.009 38.095 1.19 0.00 44.70 4.17
67 68 1.441682 GTGCAAGCTCGCTCAAAGC 60.442 57.895 0.00 0.00 40.14 3.51
68 69 1.392853 CTAGTGCAAGCTCGCTCAAAG 59.607 52.381 0.00 0.00 0.00 2.77
69 70 1.000843 TCTAGTGCAAGCTCGCTCAAA 59.999 47.619 0.00 0.00 0.00 2.69
70 71 0.603065 TCTAGTGCAAGCTCGCTCAA 59.397 50.000 0.00 0.00 0.00 3.02
71 72 0.109086 GTCTAGTGCAAGCTCGCTCA 60.109 55.000 0.00 0.00 0.00 4.26
72 73 0.804156 GGTCTAGTGCAAGCTCGCTC 60.804 60.000 0.00 0.00 0.00 5.03
73 74 1.216710 GGTCTAGTGCAAGCTCGCT 59.783 57.895 0.00 0.00 0.00 4.93
74 75 2.161486 CGGTCTAGTGCAAGCTCGC 61.161 63.158 0.00 0.00 0.00 5.03
75 76 2.161486 GCGGTCTAGTGCAAGCTCG 61.161 63.158 0.00 0.00 0.00 5.03
76 77 1.079819 TGCGGTCTAGTGCAAGCTC 60.080 57.895 0.00 0.00 38.34 4.09
77 78 1.079543 CTGCGGTCTAGTGCAAGCT 60.080 57.895 8.08 0.00 41.22 3.74
78 79 1.079819 TCTGCGGTCTAGTGCAAGC 60.080 57.895 8.08 4.88 41.22 4.01
79 80 0.244994 AGTCTGCGGTCTAGTGCAAG 59.755 55.000 8.08 0.00 41.22 4.01
80 81 0.679505 AAGTCTGCGGTCTAGTGCAA 59.320 50.000 8.08 0.00 41.22 4.08
81 82 0.679505 AAAGTCTGCGGTCTAGTGCA 59.320 50.000 6.83 6.83 39.13 4.57
82 83 1.727335 GAAAAGTCTGCGGTCTAGTGC 59.273 52.381 0.00 0.00 0.00 4.40
83 84 1.986378 CGAAAAGTCTGCGGTCTAGTG 59.014 52.381 0.00 0.00 0.00 2.74
84 85 1.067776 CCGAAAAGTCTGCGGTCTAGT 60.068 52.381 0.00 0.00 40.17 2.57
85 86 1.201647 TCCGAAAAGTCTGCGGTCTAG 59.798 52.381 0.00 0.00 45.02 2.43
86 87 1.250328 TCCGAAAAGTCTGCGGTCTA 58.750 50.000 0.00 0.00 45.02 2.59
87 88 0.608640 ATCCGAAAAGTCTGCGGTCT 59.391 50.000 0.00 0.00 45.02 3.85
88 89 1.925185 GTATCCGAAAAGTCTGCGGTC 59.075 52.381 0.00 0.00 45.02 4.79
89 90 1.549170 AGTATCCGAAAAGTCTGCGGT 59.451 47.619 0.00 0.00 45.02 5.68
90 91 2.295253 AGTATCCGAAAAGTCTGCGG 57.705 50.000 0.00 0.00 46.08 5.69
91 92 3.725010 GCAAAGTATCCGAAAAGTCTGCG 60.725 47.826 0.00 0.00 0.00 5.18
92 93 3.437049 AGCAAAGTATCCGAAAAGTCTGC 59.563 43.478 0.00 0.00 0.00 4.26
93 94 4.670221 GCAGCAAAGTATCCGAAAAGTCTG 60.670 45.833 0.00 0.00 0.00 3.51
94 95 3.437049 GCAGCAAAGTATCCGAAAAGTCT 59.563 43.478 0.00 0.00 0.00 3.24
95 96 3.188460 TGCAGCAAAGTATCCGAAAAGTC 59.812 43.478 0.00 0.00 0.00 3.01
96 97 3.058224 GTGCAGCAAAGTATCCGAAAAGT 60.058 43.478 0.00 0.00 0.00 2.66
97 98 3.492313 GTGCAGCAAAGTATCCGAAAAG 58.508 45.455 0.00 0.00 0.00 2.27
98 99 2.095969 CGTGCAGCAAAGTATCCGAAAA 60.096 45.455 0.00 0.00 0.00 2.29
99 100 1.463056 CGTGCAGCAAAGTATCCGAAA 59.537 47.619 0.00 0.00 0.00 3.46
100 101 1.075542 CGTGCAGCAAAGTATCCGAA 58.924 50.000 0.00 0.00 0.00 4.30
101 102 2.749541 CGTGCAGCAAAGTATCCGA 58.250 52.632 0.00 0.00 0.00 4.55
113 114 1.081892 AAAGCTAGTGATGCGTGCAG 58.918 50.000 0.00 0.00 35.28 4.41
114 115 0.798159 CAAAGCTAGTGATGCGTGCA 59.202 50.000 0.00 0.00 35.28 4.57
115 116 1.078709 TCAAAGCTAGTGATGCGTGC 58.921 50.000 0.00 0.00 35.28 5.34
116 117 3.314763 CATCAAAGCTAGTGATGCGTG 57.685 47.619 21.15 6.01 44.23 5.34
121 122 5.990386 CAGCATCTACATCAAAGCTAGTGAT 59.010 40.000 6.94 6.94 36.11 3.06
122 123 5.354767 CAGCATCTACATCAAAGCTAGTGA 58.645 41.667 2.70 2.70 0.00 3.41
123 124 4.510711 CCAGCATCTACATCAAAGCTAGTG 59.489 45.833 0.00 0.00 0.00 2.74
124 125 4.701765 CCAGCATCTACATCAAAGCTAGT 58.298 43.478 0.00 0.00 0.00 2.57
125 126 3.497640 GCCAGCATCTACATCAAAGCTAG 59.502 47.826 0.00 0.00 0.00 3.42
126 127 3.470709 GCCAGCATCTACATCAAAGCTA 58.529 45.455 0.00 0.00 0.00 3.32
127 128 2.295885 GCCAGCATCTACATCAAAGCT 58.704 47.619 0.00 0.00 0.00 3.74
128 129 1.003116 CGCCAGCATCTACATCAAAGC 60.003 52.381 0.00 0.00 0.00 3.51
129 130 1.600957 CCGCCAGCATCTACATCAAAG 59.399 52.381 0.00 0.00 0.00 2.77
130 131 1.065491 ACCGCCAGCATCTACATCAAA 60.065 47.619 0.00 0.00 0.00 2.69
131 132 0.541392 ACCGCCAGCATCTACATCAA 59.459 50.000 0.00 0.00 0.00 2.57
132 133 0.179076 CACCGCCAGCATCTACATCA 60.179 55.000 0.00 0.00 0.00 3.07
133 134 0.104855 TCACCGCCAGCATCTACATC 59.895 55.000 0.00 0.00 0.00 3.06
134 135 0.761187 ATCACCGCCAGCATCTACAT 59.239 50.000 0.00 0.00 0.00 2.29
135 136 0.104855 GATCACCGCCAGCATCTACA 59.895 55.000 0.00 0.00 0.00 2.74
136 137 0.601311 GGATCACCGCCAGCATCTAC 60.601 60.000 0.00 0.00 0.00 2.59
137 138 0.760567 AGGATCACCGCCAGCATCTA 60.761 55.000 0.00 0.00 41.83 1.98
138 139 2.037620 GAGGATCACCGCCAGCATCT 62.038 60.000 0.00 0.00 41.83 2.90
139 140 1.596477 GAGGATCACCGCCAGCATC 60.596 63.158 0.00 0.00 41.83 3.91
140 141 2.507944 GAGGATCACCGCCAGCAT 59.492 61.111 0.00 0.00 41.83 3.79
146 147 2.981859 TAGAAAAGGAGGATCACCGC 57.018 50.000 0.00 0.00 41.83 5.68
147 148 5.488341 TCTTTTAGAAAAGGAGGATCACCG 58.512 41.667 13.40 0.00 44.22 4.94
148 149 7.761038 TTTCTTTTAGAAAAGGAGGATCACC 57.239 36.000 13.40 0.00 40.89 4.02
160 161 7.033530 TCTGCGAATGGTTTTCTTTTAGAAA 57.966 32.000 0.00 0.00 42.00 2.52
161 162 6.293955 CCTCTGCGAATGGTTTTCTTTTAGAA 60.294 38.462 0.00 0.00 31.28 2.10
162 163 5.181245 CCTCTGCGAATGGTTTTCTTTTAGA 59.819 40.000 0.00 0.00 0.00 2.10
163 164 5.048713 ACCTCTGCGAATGGTTTTCTTTTAG 60.049 40.000 0.00 0.00 0.00 1.85
164 165 4.825085 ACCTCTGCGAATGGTTTTCTTTTA 59.175 37.500 0.00 0.00 0.00 1.52
165 166 3.636764 ACCTCTGCGAATGGTTTTCTTTT 59.363 39.130 0.00 0.00 0.00 2.27
166 167 3.222603 ACCTCTGCGAATGGTTTTCTTT 58.777 40.909 0.00 0.00 0.00 2.52
167 168 2.863809 ACCTCTGCGAATGGTTTTCTT 58.136 42.857 0.00 0.00 0.00 2.52
168 169 2.568623 ACCTCTGCGAATGGTTTTCT 57.431 45.000 0.00 0.00 0.00 2.52
172 173 2.270352 TCAAACCTCTGCGAATGGTT 57.730 45.000 0.00 0.00 44.92 3.67
179 180 3.837213 ATCACAATTCAAACCTCTGCG 57.163 42.857 0.00 0.00 0.00 5.18
188 189 8.450578 ACTCAACAAGTCTTATCACAATTCAA 57.549 30.769 0.00 0.00 30.02 2.69
196 197 6.821160 TCACAACAACTCAACAAGTCTTATCA 59.179 34.615 0.00 0.00 37.17 2.15
208 209 5.826601 TTGCTGTTATCACAACAACTCAA 57.173 34.783 0.00 0.00 34.67 3.02
212 213 7.462109 TCAATTTTGCTGTTATCACAACAAC 57.538 32.000 0.00 0.00 38.45 3.32
236 237 3.134623 TGTCTGATGTTGTGACTGGACTT 59.865 43.478 0.00 0.00 0.00 3.01
250 251 4.333649 ACGCCAGTTCAAATATGTCTGATG 59.666 41.667 0.00 0.00 34.29 3.07
255 256 5.295787 TCCATAACGCCAGTTCAAATATGTC 59.704 40.000 0.00 0.00 41.49 3.06
257 258 5.749596 TCCATAACGCCAGTTCAAATATG 57.250 39.130 0.00 0.00 41.49 1.78
261 263 4.804108 CATTTCCATAACGCCAGTTCAAA 58.196 39.130 0.00 0.00 41.49 2.69
266 268 2.128771 AGCATTTCCATAACGCCAGT 57.871 45.000 0.00 0.00 0.00 4.00
327 329 9.042008 GCATCCGACTGAAAGAATACTAAAATA 57.958 33.333 0.00 0.00 37.43 1.40
330 332 5.518847 CGCATCCGACTGAAAGAATACTAAA 59.481 40.000 0.00 0.00 37.43 1.85
331 333 5.041287 CGCATCCGACTGAAAGAATACTAA 58.959 41.667 0.00 0.00 37.43 2.24
333 335 3.448686 CGCATCCGACTGAAAGAATACT 58.551 45.455 0.00 0.00 37.43 2.12
335 337 2.821546 CCGCATCCGACTGAAAGAATA 58.178 47.619 0.00 0.00 37.43 1.75
336 338 1.656652 CCGCATCCGACTGAAAGAAT 58.343 50.000 0.00 0.00 37.43 2.40
337 339 1.019278 GCCGCATCCGACTGAAAGAA 61.019 55.000 0.00 0.00 37.43 2.52
339 341 1.021390 AAGCCGCATCCGACTGAAAG 61.021 55.000 0.00 0.00 42.29 2.62
340 342 0.248012 TAAGCCGCATCCGACTGAAA 59.752 50.000 0.00 0.00 36.29 2.69
341 343 0.248012 TTAAGCCGCATCCGACTGAA 59.752 50.000 0.00 0.00 36.29 3.02
342 344 0.248012 TTTAAGCCGCATCCGACTGA 59.752 50.000 0.00 0.00 36.29 3.41
343 345 1.003545 CATTTAAGCCGCATCCGACTG 60.004 52.381 0.00 0.00 36.29 3.51
344 346 1.134521 TCATTTAAGCCGCATCCGACT 60.135 47.619 0.00 0.00 36.29 4.18
382 384 4.467082 TGTTTTCCATTGCCTGCAGATTAT 59.533 37.500 17.39 1.71 0.00 1.28
383 385 3.831333 TGTTTTCCATTGCCTGCAGATTA 59.169 39.130 17.39 0.00 0.00 1.75
384 386 2.633967 TGTTTTCCATTGCCTGCAGATT 59.366 40.909 17.39 0.00 0.00 2.40
385 387 2.250031 TGTTTTCCATTGCCTGCAGAT 58.750 42.857 17.39 0.00 0.00 2.90
386 388 1.702182 TGTTTTCCATTGCCTGCAGA 58.298 45.000 17.39 0.00 0.00 4.26
387 389 2.343101 CATGTTTTCCATTGCCTGCAG 58.657 47.619 6.78 6.78 0.00 4.41
388 390 1.002201 CCATGTTTTCCATTGCCTGCA 59.998 47.619 0.00 0.00 0.00 4.41
389 391 1.002315 ACCATGTTTTCCATTGCCTGC 59.998 47.619 0.00 0.00 0.00 4.85
390 392 3.405823 AACCATGTTTTCCATTGCCTG 57.594 42.857 0.00 0.00 0.00 4.85
391 393 3.390639 TCAAACCATGTTTTCCATTGCCT 59.609 39.130 0.00 0.00 0.00 4.75
392 394 3.737850 TCAAACCATGTTTTCCATTGCC 58.262 40.909 0.00 0.00 0.00 4.52
393 395 5.055812 TCTTCAAACCATGTTTTCCATTGC 58.944 37.500 0.00 0.00 0.00 3.56
394 396 8.830201 TTATCTTCAAACCATGTTTTCCATTG 57.170 30.769 0.00 0.00 0.00 2.82
395 397 9.657419 GATTATCTTCAAACCATGTTTTCCATT 57.343 29.630 0.00 0.00 0.00 3.16
396 398 9.039165 AGATTATCTTCAAACCATGTTTTCCAT 57.961 29.630 0.00 0.00 0.00 3.41
397 399 8.306038 CAGATTATCTTCAAACCATGTTTTCCA 58.694 33.333 0.00 0.00 0.00 3.53
398 400 7.276438 GCAGATTATCTTCAAACCATGTTTTCC 59.724 37.037 0.00 0.00 0.00 3.13
399 401 7.814107 TGCAGATTATCTTCAAACCATGTTTTC 59.186 33.333 0.00 0.00 0.00 2.29
400 402 7.669427 TGCAGATTATCTTCAAACCATGTTTT 58.331 30.769 0.00 0.00 0.00 2.43
401 403 7.230849 TGCAGATTATCTTCAAACCATGTTT 57.769 32.000 0.00 0.00 0.00 2.83
402 404 6.127535 CCTGCAGATTATCTTCAAACCATGTT 60.128 38.462 17.39 0.00 0.00 2.71
403 405 5.359009 CCTGCAGATTATCTTCAAACCATGT 59.641 40.000 17.39 0.00 0.00 3.21
404 406 5.735354 GCCTGCAGATTATCTTCAAACCATG 60.735 44.000 17.39 0.00 0.00 3.66
405 407 4.340381 GCCTGCAGATTATCTTCAAACCAT 59.660 41.667 17.39 0.00 0.00 3.55
406 408 3.696051 GCCTGCAGATTATCTTCAAACCA 59.304 43.478 17.39 0.00 0.00 3.67
407 409 3.696051 TGCCTGCAGATTATCTTCAAACC 59.304 43.478 17.39 0.00 0.00 3.27
408 410 4.970662 TGCCTGCAGATTATCTTCAAAC 57.029 40.909 17.39 0.00 0.00 2.93
409 411 5.163488 CCATTGCCTGCAGATTATCTTCAAA 60.163 40.000 17.39 0.00 0.00 2.69
410 412 4.340097 CCATTGCCTGCAGATTATCTTCAA 59.660 41.667 17.39 6.24 0.00 2.69
411 413 3.887110 CCATTGCCTGCAGATTATCTTCA 59.113 43.478 17.39 0.00 0.00 3.02
412 414 4.139786 TCCATTGCCTGCAGATTATCTTC 58.860 43.478 17.39 0.00 0.00 2.87
413 415 4.174704 TCCATTGCCTGCAGATTATCTT 57.825 40.909 17.39 0.00 0.00 2.40
414 416 3.870538 TCCATTGCCTGCAGATTATCT 57.129 42.857 17.39 0.00 0.00 1.98
415 417 4.500375 GGTTTCCATTGCCTGCAGATTATC 60.500 45.833 17.39 0.00 0.00 1.75
445 447 4.145052 GTCCCCTGGTTTCCATTGATATC 58.855 47.826 0.00 0.00 30.82 1.63
455 457 2.952310 GCAGATTATGTCCCCTGGTTTC 59.048 50.000 0.00 0.00 0.00 2.78
457 459 1.922447 TGCAGATTATGTCCCCTGGTT 59.078 47.619 0.00 0.00 0.00 3.67
458 460 1.212935 GTGCAGATTATGTCCCCTGGT 59.787 52.381 0.00 0.00 0.00 4.00
459 461 1.811558 CGTGCAGATTATGTCCCCTGG 60.812 57.143 0.00 0.00 0.00 4.45
460 462 1.134401 ACGTGCAGATTATGTCCCCTG 60.134 52.381 0.00 0.00 0.00 4.45
461 463 1.134401 CACGTGCAGATTATGTCCCCT 60.134 52.381 0.82 0.00 0.00 4.79
462 464 1.299541 CACGTGCAGATTATGTCCCC 58.700 55.000 0.82 0.00 0.00 4.81
463 465 1.299541 CCACGTGCAGATTATGTCCC 58.700 55.000 10.91 0.00 0.00 4.46
464 466 1.665679 CACCACGTGCAGATTATGTCC 59.334 52.381 10.91 0.00 0.00 4.02
465 467 2.094258 CACACCACGTGCAGATTATGTC 59.906 50.000 10.91 0.00 39.19 3.06
478 480 2.201732 CCGGAATATCTTCACACCACG 58.798 52.381 0.00 0.00 32.70 4.94
484 486 5.866207 ACTAATTCCCCGGAATATCTTCAC 58.134 41.667 0.73 0.00 43.26 3.18
516 518 0.178932 AAACTTCCCAAAGCCCCTCC 60.179 55.000 0.00 0.00 35.81 4.30
523 525 7.772166 AGTTCTAGTTGAAAAACTTCCCAAAG 58.228 34.615 0.00 0.00 36.30 2.77
526 528 7.798071 TCTAGTTCTAGTTGAAAAACTTCCCA 58.202 34.615 6.73 0.00 36.30 4.37
554 556 6.073873 GCTAAGTCTGATCGAATCCTCATTTG 60.074 42.308 0.00 0.00 0.00 2.32
611 617 7.827819 TTCAGTTGAGATATTGAGTTTACCG 57.172 36.000 0.00 0.00 0.00 4.02
737 751 5.590259 GTCCAATTGTGTTACCATAGCATCT 59.410 40.000 4.43 0.00 0.00 2.90
777 791 3.071892 TGATGTTCTTGACCGGTTACCTT 59.928 43.478 9.42 0.00 0.00 3.50
782 796 1.142060 TGGTGATGTTCTTGACCGGTT 59.858 47.619 9.42 0.00 0.00 4.44
823 837 5.822204 TAACTAAAGTTGGGTGCATACCAT 58.178 37.500 13.09 2.42 42.73 3.55
903 930 7.309377 CCAAAGGATGGTAATTATACATGCCAG 60.309 40.741 15.85 9.41 44.85 4.85
974 1003 1.734477 ACACAGACGCGCAGATGAC 60.734 57.895 5.73 0.00 0.00 3.06
1178 1219 2.612672 CTGCACACCAGCTCATAAGATG 59.387 50.000 0.00 0.00 38.67 2.90
1194 1235 2.194271 GTAGCCTTCGTATCACTGCAC 58.806 52.381 0.00 0.00 0.00 4.57
1206 1247 3.932710 TGTCGATGTGAATTGTAGCCTTC 59.067 43.478 0.00 0.00 0.00 3.46
1240 1281 1.662629 GTCGTTGATGGCAGAGACATG 59.337 52.381 0.00 0.00 27.61 3.21
1302 1343 0.179097 GTAGAGGGCAGCTGCTGTAC 60.179 60.000 35.82 25.04 41.70 2.90
1343 1384 3.021695 TCATTGACTACCTCGACGGAAT 58.978 45.455 7.76 0.00 36.31 3.01
1348 1389 2.161012 TGTCGTCATTGACTACCTCGAC 59.839 50.000 16.25 15.42 43.78 4.20
1351 1392 3.130516 TCCATGTCGTCATTGACTACCTC 59.869 47.826 16.25 3.78 39.64 3.85
1352 1393 3.096852 TCCATGTCGTCATTGACTACCT 58.903 45.455 16.25 6.28 39.64 3.08
1405 1446 4.154918 CCGAGAGCATTTAAGAAAGCAAGT 59.845 41.667 0.00 0.00 0.00 3.16
1663 1704 8.297470 TGAAAAGGATATCTGAAAGGGAATTG 57.703 34.615 2.05 0.00 0.00 2.32
1675 1716 4.102367 GCTCCTCACCTGAAAAGGATATCT 59.898 45.833 2.05 0.00 38.49 1.98
1677 1718 3.782523 TGCTCCTCACCTGAAAAGGATAT 59.217 43.478 0.00 0.00 38.49 1.63
1681 1722 2.503895 ATGCTCCTCACCTGAAAAGG 57.496 50.000 0.00 0.00 0.00 3.11
1682 1723 4.761739 TGTTTATGCTCCTCACCTGAAAAG 59.238 41.667 0.00 0.00 0.00 2.27
1683 1724 4.724399 TGTTTATGCTCCTCACCTGAAAA 58.276 39.130 0.00 0.00 0.00 2.29
1684 1725 4.365514 TGTTTATGCTCCTCACCTGAAA 57.634 40.909 0.00 0.00 0.00 2.69
1685 1726 4.019411 TGATGTTTATGCTCCTCACCTGAA 60.019 41.667 0.00 0.00 0.00 3.02
1686 1727 3.519107 TGATGTTTATGCTCCTCACCTGA 59.481 43.478 0.00 0.00 0.00 3.86
1687 1728 3.877559 TGATGTTTATGCTCCTCACCTG 58.122 45.455 0.00 0.00 0.00 4.00
1688 1729 4.574674 TTGATGTTTATGCTCCTCACCT 57.425 40.909 0.00 0.00 0.00 4.00
1689 1730 4.943705 TCTTTGATGTTTATGCTCCTCACC 59.056 41.667 0.00 0.00 0.00 4.02
1690 1731 6.500684 TTCTTTGATGTTTATGCTCCTCAC 57.499 37.500 0.00 0.00 0.00 3.51
1691 1732 6.405065 GCATTCTTTGATGTTTATGCTCCTCA 60.405 38.462 0.00 0.00 36.39 3.86
1694 1735 5.045872 GGCATTCTTTGATGTTTATGCTCC 58.954 41.667 0.00 0.00 38.64 4.70
1700 1741 9.120538 GGAGTATTAGGCATTCTTTGATGTTTA 57.879 33.333 0.00 0.00 0.00 2.01
1742 1786 8.598041 ACCACTCTATACAGATATCAAAATCCC 58.402 37.037 5.32 0.00 0.00 3.85
1788 1835 7.082602 GGACAAGACAGGTATGTATATACACG 58.917 42.308 17.69 7.04 40.68 4.49
1823 1870 0.927029 AAGGACTGAAATAGGGGCCC 59.073 55.000 17.12 17.12 0.00 5.80
1831 1879 6.149474 CCAACGAGACATAAAAGGACTGAAAT 59.851 38.462 0.00 0.00 0.00 2.17
1837 1885 4.332819 CCATCCAACGAGACATAAAAGGAC 59.667 45.833 0.00 0.00 0.00 3.85
1869 1917 3.740832 CACTACACACTTGCGAGAATTCA 59.259 43.478 8.31 0.00 0.00 2.57
1872 1920 3.660501 TCACTACACACTTGCGAGAAT 57.339 42.857 8.31 0.00 0.00 2.40
1875 1923 2.061773 CCTTCACTACACACTTGCGAG 58.938 52.381 0.00 0.00 0.00 5.03
1895 1943 2.855180 CCAGAACACAATTCATGACGC 58.145 47.619 0.00 0.00 0.00 5.19
1901 1949 5.426504 ACAAAATTGCCAGAACACAATTCA 58.573 33.333 1.82 0.00 43.76 2.57
1902 1950 5.989551 ACAAAATTGCCAGAACACAATTC 57.010 34.783 1.82 0.00 43.76 2.17
1904 1952 4.507388 CGAACAAAATTGCCAGAACACAAT 59.493 37.500 0.00 0.00 38.11 2.71
1913 1961 2.029470 GGTCCATCGAACAAAATTGCCA 60.029 45.455 0.00 0.00 0.00 4.92
1915 1963 2.231235 AGGGTCCATCGAACAAAATTGC 59.769 45.455 0.00 0.00 0.00 3.56
1916 1964 4.218417 AGAAGGGTCCATCGAACAAAATTG 59.782 41.667 0.00 0.00 0.00 2.32
1933 1984 2.567615 ACACTAAGCAGTACCAGAAGGG 59.432 50.000 0.00 0.00 36.11 3.95
1934 1985 3.963428 ACACTAAGCAGTACCAGAAGG 57.037 47.619 0.00 0.00 34.87 3.46
1935 1986 4.806247 GCATACACTAAGCAGTACCAGAAG 59.194 45.833 0.00 0.00 32.21 2.85
1949 2000 4.699735 CACCAAATCCAGTTGCATACACTA 59.300 41.667 0.00 0.00 0.00 2.74
1951 2002 3.505680 TCACCAAATCCAGTTGCATACAC 59.494 43.478 0.00 0.00 0.00 2.90
1954 2005 5.263599 AGAATCACCAAATCCAGTTGCATA 58.736 37.500 0.00 0.00 0.00 3.14
1955 2006 4.091549 AGAATCACCAAATCCAGTTGCAT 58.908 39.130 0.00 0.00 0.00 3.96
1976 2027 4.687948 CGGATTGTATGCTTGATGAGGTAG 59.312 45.833 0.00 0.00 0.00 3.18
1978 2029 3.118261 ACGGATTGTATGCTTGATGAGGT 60.118 43.478 0.00 0.00 0.00 3.85
1988 2039 2.810650 ACGAGAAGACGGATTGTATGC 58.189 47.619 0.00 0.00 37.61 3.14
1994 2045 3.380479 TGACAAACGAGAAGACGGATT 57.620 42.857 0.00 0.00 37.61 3.01
1997 2048 2.218759 CAGTTGACAAACGAGAAGACGG 59.781 50.000 0.00 0.00 41.45 4.79
2006 2057 1.782569 CAGCAATGCAGTTGACAAACG 59.217 47.619 8.35 0.00 41.45 3.60
2009 2060 1.401761 ACCAGCAATGCAGTTGACAA 58.598 45.000 8.35 0.00 40.37 3.18
2016 2067 0.729116 CGGAACTACCAGCAATGCAG 59.271 55.000 8.35 0.00 38.90 4.41
2019 2070 3.009723 ACATTCGGAACTACCAGCAATG 58.990 45.455 0.00 0.00 38.90 2.82
2030 2081 5.741388 ATTATGAGCAGAACATTCGGAAC 57.259 39.130 0.00 0.00 0.00 3.62
2034 2085 4.912214 TGCAATTATGAGCAGAACATTCG 58.088 39.130 0.00 0.00 35.51 3.34
2048 2099 8.510243 TGTGATGATGAAGTAACTGCAATTAT 57.490 30.769 0.00 0.00 0.00 1.28
2055 2106 6.074623 GCGTAGATGTGATGATGAAGTAACTG 60.075 42.308 0.00 0.00 0.00 3.16
2060 2111 4.391405 TGCGTAGATGTGATGATGAAGT 57.609 40.909 0.00 0.00 0.00 3.01
2109 2160 4.380867 GCATAGCACTGCATAAACAGGTTT 60.381 41.667 3.30 2.66 42.21 3.27
2179 2231 3.930229 CGTGATCCTCGTTTTCCAATACA 59.070 43.478 0.00 0.00 0.00 2.29
2282 2334 7.044181 CCAGCTTATCTCTGAAATGACTTGTA 58.956 38.462 0.00 0.00 33.54 2.41
2288 2340 3.434167 GGCCCAGCTTATCTCTGAAATGA 60.434 47.826 0.00 0.00 33.54 2.57
2465 2517 1.767088 TCTGAGCAGAATCCCATGAGG 59.233 52.381 0.00 0.00 33.91 3.86
2504 2556 5.045578 ACCTTGAGGCATGTACTCATAAACT 60.046 40.000 18.62 3.08 43.82 2.66
2510 2562 2.906389 AGAACCTTGAGGCATGTACTCA 59.094 45.455 15.38 15.38 42.81 3.41
2582 2634 0.764890 TGCCCAAAGCTATATCGGCT 59.235 50.000 10.44 0.00 44.23 5.52
2588 2640 2.694628 CCTTGCAATGCCCAAAGCTATA 59.305 45.455 1.53 0.00 44.23 1.31
2606 2658 1.007963 TGAAGGTAGTCGATCCCCCTT 59.992 52.381 7.95 7.95 38.20 3.95
2772 2824 3.372675 GCTATGTACCCAATTGTTCCCCT 60.373 47.826 4.43 0.00 0.00 4.79
2780 2832 4.298626 TCTCAGGAGCTATGTACCCAATT 58.701 43.478 0.00 0.00 0.00 2.32
2840 2894 4.829492 AGCATCCCAAAGCTATAAACATCC 59.171 41.667 0.00 0.00 39.78 3.51
2849 2903 1.033746 GCAGCAGCATCCCAAAGCTA 61.034 55.000 0.00 0.00 39.50 3.32
2870 2924 0.325671 TTCTTCCTCCGGCCATCTCT 60.326 55.000 2.24 0.00 0.00 3.10
2909 2963 3.491652 GCTTGGCTCGAGTTCGCC 61.492 66.667 15.13 10.52 46.46 5.54
3239 3302 7.227873 TCCACATAAAAGTTCACAATACCTGA 58.772 34.615 0.00 0.00 0.00 3.86
3241 3304 8.357402 GTTTCCACATAAAAGTTCACAATACCT 58.643 33.333 0.00 0.00 0.00 3.08
3245 3308 8.203485 ACATGTTTCCACATAAAAGTTCACAAT 58.797 29.630 0.00 0.00 42.14 2.71
3246 3309 7.551585 ACATGTTTCCACATAAAAGTTCACAA 58.448 30.769 0.00 0.00 42.14 3.33
3279 3342 8.540507 TCCTCTCTTTACAACTGCTAGATTAT 57.459 34.615 0.00 0.00 0.00 1.28
3280 3343 7.956328 TCCTCTCTTTACAACTGCTAGATTA 57.044 36.000 0.00 0.00 0.00 1.75
3281 3344 6.859112 TCCTCTCTTTACAACTGCTAGATT 57.141 37.500 0.00 0.00 0.00 2.40
3282 3345 6.382570 ACATCCTCTCTTTACAACTGCTAGAT 59.617 38.462 0.00 0.00 0.00 1.98
3297 3366 4.709397 CAGTTGGAGTTCTACATCCTCTCT 59.291 45.833 0.00 0.00 36.50 3.10
3298 3367 4.679372 GCAGTTGGAGTTCTACATCCTCTC 60.679 50.000 0.00 0.00 36.50 3.20
3520 3701 1.630126 ATACAGGACAGGCTGGGCTG 61.630 60.000 20.34 20.08 0.00 4.85
3575 3756 0.661552 CATGCATACACTGAGCCAGC 59.338 55.000 0.00 0.00 34.37 4.85
3577 3758 2.495155 AACATGCATACACTGAGCCA 57.505 45.000 0.00 0.00 0.00 4.75
3578 3759 2.614057 GGTAACATGCATACACTGAGCC 59.386 50.000 0.00 0.00 0.00 4.70
3580 3761 4.572389 GGAAGGTAACATGCATACACTGAG 59.428 45.833 0.00 0.00 41.41 3.35
3581 3762 4.225042 AGGAAGGTAACATGCATACACTGA 59.775 41.667 0.00 0.00 41.41 3.41
3582 3763 4.517285 AGGAAGGTAACATGCATACACTG 58.483 43.478 0.00 0.00 41.41 3.66
3584 3765 3.877508 GGAGGAAGGTAACATGCATACAC 59.122 47.826 0.00 0.00 41.41 2.90
3585 3766 3.780294 AGGAGGAAGGTAACATGCATACA 59.220 43.478 0.00 0.00 41.41 2.29
3586 3767 4.130118 CAGGAGGAAGGTAACATGCATAC 58.870 47.826 0.00 0.00 41.41 2.39
3588 3769 2.578021 ACAGGAGGAAGGTAACATGCAT 59.422 45.455 0.00 0.00 41.41 3.96
3589 3770 1.985159 ACAGGAGGAAGGTAACATGCA 59.015 47.619 0.00 0.00 41.41 3.96
3590 3771 2.789409 ACAGGAGGAAGGTAACATGC 57.211 50.000 0.00 0.00 41.41 4.06
3591 3772 3.197766 TGCTACAGGAGGAAGGTAACATG 59.802 47.826 0.00 0.00 41.41 3.21
3597 3874 1.002087 CGTTTGCTACAGGAGGAAGGT 59.998 52.381 0.00 0.00 36.76 3.50
3598 3875 1.002087 ACGTTTGCTACAGGAGGAAGG 59.998 52.381 0.00 0.00 36.76 3.46
3617 3894 8.085296 CCATAGTCCATACATTGAGAAGAGTAC 58.915 40.741 0.00 0.00 0.00 2.73
3633 3910 2.766263 TCTTCAACGCTCCATAGTCCAT 59.234 45.455 0.00 0.00 0.00 3.41
3659 3936 1.328279 ATATGACGAGTCCATCCGCA 58.672 50.000 0.34 0.00 0.00 5.69
3660 3937 2.061773 CAATATGACGAGTCCATCCGC 58.938 52.381 0.34 0.00 0.00 5.54
3661 3938 3.309388 GTCAATATGACGAGTCCATCCG 58.691 50.000 0.34 0.00 37.67 4.18
3669 3946 5.782393 TGCATTCGCAGTCAATATGACGAG 61.782 45.833 4.96 3.80 45.36 4.18
3710 4008 7.865706 ACTCGGTCAGCAGAAATATAAAAAT 57.134 32.000 0.00 0.00 0.00 1.82
3711 4009 7.606456 AGAACTCGGTCAGCAGAAATATAAAAA 59.394 33.333 0.00 0.00 0.00 1.94
3731 4033 6.801539 TCACATTCATGGTTACAAGAACTC 57.198 37.500 0.00 0.00 37.16 3.01
3740 4042 8.100164 TCAAGTCTACAATCACATTCATGGTTA 58.900 33.333 0.00 0.00 0.00 2.85
3813 4140 2.675348 GCTACTGCTGTCCACTGATTTC 59.325 50.000 0.00 0.00 36.03 2.17
3868 4195 2.154462 CCGTGCCTCTGACTGAAATTT 58.846 47.619 0.00 0.00 0.00 1.82
3883 4210 1.341531 AGAGCTATCCATGTACCGTGC 59.658 52.381 0.00 0.00 0.00 5.34
3884 4211 2.887783 AGAGAGCTATCCATGTACCGTG 59.112 50.000 4.34 0.00 0.00 4.94
3885 4212 3.231207 AGAGAGCTATCCATGTACCGT 57.769 47.619 4.34 0.00 0.00 4.83
3886 4213 3.440872 GGTAGAGAGCTATCCATGTACCG 59.559 52.174 4.34 0.00 0.00 4.02
3890 4219 6.799827 AGATAAGGTAGAGAGCTATCCATGT 58.200 40.000 4.34 0.00 31.56 3.21
3893 4222 5.571862 CGGAGATAAGGTAGAGAGCTATCCA 60.572 48.000 4.34 0.00 31.56 3.41
3894 4223 4.879545 CGGAGATAAGGTAGAGAGCTATCC 59.120 50.000 4.34 0.00 31.56 2.59
3904 4233 5.681639 ACCAAAATTCCGGAGATAAGGTAG 58.318 41.667 15.61 0.27 0.00 3.18
3924 4253 2.170397 ACACTCACATGAACACTGACCA 59.830 45.455 0.00 0.00 0.00 4.02
3925 4254 2.838736 ACACTCACATGAACACTGACC 58.161 47.619 0.00 0.00 0.00 4.02
3929 4258 3.898123 AGGTCTACACTCACATGAACACT 59.102 43.478 0.00 0.00 0.00 3.55
3930 4259 3.990469 CAGGTCTACACTCACATGAACAC 59.010 47.826 0.00 0.00 0.00 3.32
3931 4260 3.554960 GCAGGTCTACACTCACATGAACA 60.555 47.826 0.00 0.00 0.00 3.18
3932 4261 2.996621 GCAGGTCTACACTCACATGAAC 59.003 50.000 0.00 0.00 0.00 3.18
3933 4262 2.632512 TGCAGGTCTACACTCACATGAA 59.367 45.455 0.00 0.00 0.00 2.57
3934 4263 2.232208 CTGCAGGTCTACACTCACATGA 59.768 50.000 5.57 0.00 0.00 3.07
3935 4264 2.028658 ACTGCAGGTCTACACTCACATG 60.029 50.000 19.93 0.00 0.00 3.21
3936 4265 2.232452 GACTGCAGGTCTACACTCACAT 59.768 50.000 19.93 0.00 41.46 3.21
3937 4266 1.613925 GACTGCAGGTCTACACTCACA 59.386 52.381 19.93 0.00 41.46 3.58
3938 4267 1.067495 GGACTGCAGGTCTACACTCAC 60.067 57.143 19.93 0.00 43.97 3.51
3939 4268 1.257743 GGACTGCAGGTCTACACTCA 58.742 55.000 19.93 0.00 43.97 3.41
3940 4269 1.203523 CTGGACTGCAGGTCTACACTC 59.796 57.143 19.93 3.26 43.97 3.51
3941 4270 1.261480 CTGGACTGCAGGTCTACACT 58.739 55.000 19.93 0.00 43.97 3.55
3942 4271 0.969894 ACTGGACTGCAGGTCTACAC 59.030 55.000 19.93 0.31 43.97 2.90
3943 4272 0.969149 CACTGGACTGCAGGTCTACA 59.031 55.000 19.93 2.77 43.97 2.74
3944 4273 0.969894 ACACTGGACTGCAGGTCTAC 59.030 55.000 19.93 0.00 43.97 2.59
3945 4274 1.203063 AGACACTGGACTGCAGGTCTA 60.203 52.381 19.93 10.07 43.97 2.59
3946 4275 0.470833 AGACACTGGACTGCAGGTCT 60.471 55.000 19.93 16.07 43.97 3.85
3947 4276 0.037790 GAGACACTGGACTGCAGGTC 60.038 60.000 19.93 14.01 43.79 3.85
3965 4305 8.963725 CCACTACTTTGGTCCATATATATACGA 58.036 37.037 0.00 0.00 0.00 3.43
3980 4336 1.160137 GCTGCTGACCACTACTTTGG 58.840 55.000 0.00 0.00 43.04 3.28
3981 4337 1.802960 CTGCTGCTGACCACTACTTTG 59.197 52.381 0.00 0.00 0.00 2.77
3982 4338 1.879796 GCTGCTGCTGACCACTACTTT 60.880 52.381 10.92 0.00 36.03 2.66
3992 4348 3.607370 CTGAGGCTGCTGCTGCTGA 62.607 63.158 26.79 12.66 40.01 4.26
4004 4360 1.853963 TCTTACCCTGAGACTGAGGC 58.146 55.000 1.75 0.00 0.00 4.70
4010 4366 7.664318 TCCAACTTAATTTTCTTACCCTGAGAC 59.336 37.037 0.00 0.00 0.00 3.36
4041 4403 0.514255 CGGAATGTGTGTGACAGCAG 59.486 55.000 0.00 0.00 38.23 4.24
4099 4461 4.070716 CTGCTGAACTTTGAGGTCATTCT 58.929 43.478 0.00 0.00 41.79 2.40
4100 4462 4.067896 TCTGCTGAACTTTGAGGTCATTC 58.932 43.478 0.00 0.00 41.79 2.67
4129 4495 2.819608 GTTGCATTCTTGGCCTGTAGAA 59.180 45.455 14.90 14.90 35.08 2.10
4130 4496 2.436417 GTTGCATTCTTGGCCTGTAGA 58.564 47.619 3.32 0.99 0.00 2.59
4131 4497 1.474077 GGTTGCATTCTTGGCCTGTAG 59.526 52.381 3.32 0.00 0.00 2.74
4132 4498 1.075374 AGGTTGCATTCTTGGCCTGTA 59.925 47.619 3.32 0.00 0.00 2.74
4133 4499 0.178953 AGGTTGCATTCTTGGCCTGT 60.179 50.000 3.32 0.00 0.00 4.00
4136 4502 0.613012 AGGAGGTTGCATTCTTGGCC 60.613 55.000 0.00 0.00 0.00 5.36
4171 4537 1.086696 ACAATCGCACTCGGAATTGG 58.913 50.000 4.82 0.00 35.50 3.16
4177 4543 1.132453 TGAGTCTACAATCGCACTCGG 59.868 52.381 0.00 0.00 38.52 4.63
4216 4582 1.461127 CGGCTGTTTACTGCTGAAGAC 59.539 52.381 13.42 0.00 46.18 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.