Multiple sequence alignment - TraesCS3D01G009900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G009900 chr3D 100.000 4580 0 0 1 4580 3334710 3339289 0.000000e+00 8458.0
1 TraesCS3D01G009900 chr3B 92.164 1123 76 6 1688 2808 265866 266978 0.000000e+00 1576.0
2 TraesCS3D01G009900 chr3B 91.761 971 56 9 2868 3818 267064 268030 0.000000e+00 1328.0
3 TraesCS3D01G009900 chr3B 90.646 588 45 6 1 578 263888 264475 0.000000e+00 773.0
4 TraesCS3D01G009900 chr3B 84.731 799 45 28 583 1320 264569 265351 0.000000e+00 728.0
5 TraesCS3D01G009900 chr3B 87.716 464 35 9 3931 4378 504522478 504522021 5.250000e-144 521.0
6 TraesCS3D01G009900 chr3B 89.071 183 15 4 1476 1656 265582 265761 5.960000e-54 222.0
7 TraesCS3D01G009900 chr3B 86.260 131 15 1 4224 4354 268772 268899 6.180000e-29 139.0
8 TraesCS3D01G009900 chr3B 98.039 51 1 0 3849 3899 267993 268043 6.310000e-14 89.8
9 TraesCS3D01G009900 chr3A 92.509 881 45 10 2869 3736 432163 433035 0.000000e+00 1242.0
10 TraesCS3D01G009900 chr3A 93.913 575 20 3 1685 2253 430998 431563 0.000000e+00 854.0
11 TraesCS3D01G009900 chr3A 93.663 505 31 1 2297 2800 431559 432063 0.000000e+00 754.0
12 TraesCS3D01G009900 chr3A 89.796 588 50 1 1 578 428994 429581 0.000000e+00 745.0
13 TraesCS3D01G009900 chr3A 85.234 684 30 21 686 1320 429811 430472 5.000000e-179 638.0
14 TraesCS3D01G009900 chr3A 94.146 410 24 0 2322 2731 606305 606714 3.890000e-175 625.0
15 TraesCS3D01G009900 chr3A 83.887 391 52 8 4197 4577 709193 709582 3.370000e-96 363.0
16 TraesCS3D01G009900 chr3A 87.833 263 24 6 3553 3807 702876 703138 7.450000e-78 302.0
17 TraesCS3D01G009900 chr3A 80.145 413 54 9 3095 3507 448918 449302 2.700000e-72 283.0
18 TraesCS3D01G009900 chr3A 85.366 287 18 14 4092 4368 433607 433879 4.510000e-70 276.0
19 TraesCS3D01G009900 chr3A 88.482 191 14 4 3455 3637 562926 563116 1.660000e-54 224.0
20 TraesCS3D01G009900 chr3A 89.941 169 12 3 3928 4092 433359 433526 3.590000e-51 213.0
21 TraesCS3D01G009900 chr3A 90.580 138 7 2 3681 3818 610355 610486 1.310000e-40 178.0
22 TraesCS3D01G009900 chr3A 87.288 118 11 3 583 697 429674 429790 1.030000e-26 132.0
23 TraesCS3D01G009900 chr3A 83.206 131 15 3 4224 4354 565324 565447 3.750000e-21 113.0
24 TraesCS3D01G009900 chr3A 98.039 51 1 0 3849 3899 610449 610499 6.310000e-14 89.8
25 TraesCS3D01G009900 chr3A 96.078 51 2 0 3849 3899 563465 563515 2.940000e-12 84.2
26 TraesCS3D01G009900 chr3A 80.000 105 11 4 3754 3852 433031 433131 8.220000e-08 69.4
27 TraesCS3D01G009900 chr7B 87.716 464 37 9 3931 4378 694883172 694883631 1.460000e-144 523.0
28 TraesCS3D01G009900 chr4A 87.716 464 37 11 3931 4378 687368729 687369188 1.460000e-144 523.0
29 TraesCS3D01G009900 chr6B 87.284 464 39 9 3931 4378 346221954 346221495 3.160000e-141 512.0
30 TraesCS3D01G009900 chr6B 89.157 332 19 8 3931 4246 160729766 160730096 9.230000e-107 398.0
31 TraesCS3D01G009900 chr6B 90.000 80 4 1 3732 3811 265680708 265680633 2.920000e-17 100.0
32 TraesCS3D01G009900 chr2B 87.284 464 39 9 3931 4378 203467290 203467749 3.160000e-141 512.0
33 TraesCS3D01G009900 chr2B 85.600 125 11 4 4224 4348 87813819 87813936 1.730000e-24 124.0
34 TraesCS3D01G009900 chr2B 96.078 51 2 0 3734 3784 87813554 87813604 2.940000e-12 84.2
35 TraesCS3D01G009900 chr1A 98.039 51 1 0 3734 3784 570358635 570358585 6.310000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G009900 chr3D 3334710 3339289 4579 False 8458.000000 8458 100.000000 1 4580 1 chr3D.!!$F1 4579
1 TraesCS3D01G009900 chr3B 263888 268899 5011 False 693.685714 1576 90.381714 1 4354 7 chr3B.!!$F1 4353
2 TraesCS3D01G009900 chr3A 428994 433879 4885 False 547.044444 1242 88.634444 1 4368 9 chr3A.!!$F4 4367
3 TraesCS3D01G009900 chr3A 606305 610499 4194 False 297.600000 625 94.255000 2322 3899 3 chr3A.!!$F6 1577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
586 597 0.245539 AGCATCAGTGGTTGCAATGC 59.754 50.000 17.54 6.62 41.24 3.56 F
1526 1834 0.383949 TTGTTTTGCTTCGCAGGTCC 59.616 50.000 0.00 0.00 40.61 4.46 F
1630 1938 1.002274 AGAGGAACCCGAGCATCCT 59.998 57.895 0.00 0.00 46.14 3.24 F
2108 2514 1.154225 GATGCCGCTTTGGTCAACG 60.154 57.895 0.00 0.00 41.21 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1606 1914 0.250513 GCTCGGGTTCCTCTGTTGAT 59.749 55.0 0.00 0.00 0.00 2.57 R
2955 5964 0.907486 CCCCTTCTGAGACATCTGCA 59.093 55.0 0.00 0.00 0.00 4.41 R
3555 6564 0.674895 GCTCTACTTGGTGCACCTGG 60.675 60.0 34.75 27.17 36.82 4.45 R
3849 7517 0.036022 TCGACCCATGCACATGTCAA 59.964 50.0 9.63 0.00 37.11 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.504920 GCCTTCATAGGGCCCAAAC 58.495 57.895 27.56 0.25 43.49 2.93
126 127 3.636153 ACAACAGAAATAGAGAGGCCC 57.364 47.619 0.00 0.00 0.00 5.80
127 128 2.093447 ACAACAGAAATAGAGAGGCCCG 60.093 50.000 0.00 0.00 0.00 6.13
142 143 2.298661 CCCGGTACAAGGGGCTCTT 61.299 63.158 15.72 0.00 45.14 2.85
158 159 1.903183 CTCTTCCCTCGTTCCTCCTTT 59.097 52.381 0.00 0.00 0.00 3.11
160 161 2.709397 TCTTCCCTCGTTCCTCCTTTTT 59.291 45.455 0.00 0.00 0.00 1.94
161 162 2.853235 TCCCTCGTTCCTCCTTTTTC 57.147 50.000 0.00 0.00 0.00 2.29
165 166 3.477530 CCTCGTTCCTCCTTTTTCAGTT 58.522 45.455 0.00 0.00 0.00 3.16
187 188 2.677836 GCTAGCGTGGATGAACAATTCA 59.322 45.455 0.00 0.00 45.01 2.57
190 191 3.149196 AGCGTGGATGAACAATTCAAGT 58.851 40.909 0.00 0.00 43.95 3.16
196 197 2.118228 TGAACAATTCAAGTGCGTGC 57.882 45.000 0.00 0.00 36.59 5.34
211 212 1.826385 CGTGCCATTTCCTTCTCCTT 58.174 50.000 0.00 0.00 0.00 3.36
219 220 5.206587 CCATTTCCTTCTCCTTCATTGGAT 58.793 41.667 0.00 0.00 35.30 3.41
250 251 4.126908 CTGGACTCCCTCAGCACT 57.873 61.111 0.00 0.00 0.00 4.40
276 277 1.066430 TCGCTCCTAAACCTTTGCGAT 60.066 47.619 3.75 0.00 45.74 4.58
353 354 2.444256 CGACCCCCTCATTCCCTCC 61.444 68.421 0.00 0.00 0.00 4.30
379 380 2.166459 CACTATCGAGCACTCCCAAAGA 59.834 50.000 0.00 0.00 0.00 2.52
466 467 5.452078 TCCTTTAGTCGACTACGGAAAAA 57.548 39.130 27.98 19.11 40.21 1.94
478 479 0.447801 CGGAAAAACTCCTCCATGCG 59.552 55.000 0.00 0.00 42.85 4.73
502 503 0.251832 TCCTTGCTCCTTCCGAGACT 60.252 55.000 0.00 0.00 41.63 3.24
578 589 0.391661 CCGTTGCTAGCATCAGTGGT 60.392 55.000 20.13 0.00 39.78 4.16
579 590 1.442769 CGTTGCTAGCATCAGTGGTT 58.557 50.000 20.13 0.00 37.28 3.67
585 596 3.416119 CTAGCATCAGTGGTTGCAATG 57.584 47.619 17.54 0.00 41.24 2.82
586 597 0.245539 AGCATCAGTGGTTGCAATGC 59.754 50.000 17.54 6.62 41.24 3.56
587 598 1.074319 GCATCAGTGGTTGCAATGCG 61.074 55.000 0.59 0.00 39.12 4.73
607 706 4.506288 TGCGACCTCGTGTATAAATGATTG 59.494 41.667 0.00 0.00 42.22 2.67
615 717 7.106439 TCGTGTATAAATGATTGCCCAAATT 57.894 32.000 0.00 0.00 0.00 1.82
641 743 7.658525 AAAATGGTGCATATGATAAACTGGA 57.341 32.000 6.97 0.00 0.00 3.86
655 757 2.191128 ACTGGACCATTGCAAGAGTC 57.809 50.000 18.71 18.71 0.00 3.36
898 1051 0.395724 GGGGGCAAATCCGTCAATCT 60.396 55.000 0.00 0.00 34.94 2.40
900 1053 1.025041 GGGCAAATCCGTCAATCTCC 58.975 55.000 0.00 0.00 34.94 3.71
901 1054 1.681780 GGGCAAATCCGTCAATCTCCA 60.682 52.381 0.00 0.00 34.94 3.86
1013 1195 2.635443 CCGAAATGCCGCACCCTTT 61.635 57.895 0.00 0.00 0.00 3.11
1261 1464 4.680237 CCAAGGTGCGTGCCGAGA 62.680 66.667 0.00 0.00 0.00 4.04
1279 1482 3.365465 CGAGATTCCGTCGCAGAGATTAT 60.365 47.826 0.00 0.00 36.95 1.28
1297 1500 5.543790 AGATTATTTTTGTGCTCCCCAAGTT 59.456 36.000 0.00 0.00 0.00 2.66
1301 1504 3.517296 TTTGTGCTCCCCAAGTTCATA 57.483 42.857 0.00 0.00 0.00 2.15
1311 1514 5.271598 TCCCCAAGTTCATAATGCAGATTT 58.728 37.500 0.00 0.00 0.00 2.17
1312 1515 5.127519 TCCCCAAGTTCATAATGCAGATTTG 59.872 40.000 0.00 0.00 0.00 2.32
1320 1523 6.874297 TCATAATGCAGATTTGAAAAAGCG 57.126 33.333 0.00 0.00 0.00 4.68
1321 1524 5.806502 TCATAATGCAGATTTGAAAAAGCGG 59.193 36.000 0.00 0.00 0.00 5.52
1338 1602 2.100584 AGCGGTTGAAATGCAGTCAAAA 59.899 40.909 15.17 0.00 36.77 2.44
1339 1603 3.059166 GCGGTTGAAATGCAGTCAAAAT 58.941 40.909 15.17 0.00 36.77 1.82
1340 1604 3.121778 GCGGTTGAAATGCAGTCAAAATC 59.878 43.478 15.17 8.71 36.77 2.17
1341 1605 4.549458 CGGTTGAAATGCAGTCAAAATCT 58.451 39.130 15.17 0.00 36.77 2.40
1343 1607 4.687483 GGTTGAAATGCAGTCAAAATCTGG 59.313 41.667 15.17 0.00 36.77 3.86
1344 1608 3.916761 TGAAATGCAGTCAAAATCTGGC 58.083 40.909 0.48 0.00 33.98 4.85
1420 1728 2.962421 TGGACTTTGGGTGATTTGAACC 59.038 45.455 0.00 0.00 36.94 3.62
1421 1729 2.962421 GGACTTTGGGTGATTTGAACCA 59.038 45.455 0.00 0.00 39.65 3.67
1422 1730 3.005791 GGACTTTGGGTGATTTGAACCAG 59.994 47.826 0.00 0.00 39.65 4.00
1423 1731 3.636764 GACTTTGGGTGATTTGAACCAGT 59.363 43.478 0.00 0.00 39.65 4.00
1424 1732 4.030216 ACTTTGGGTGATTTGAACCAGTT 58.970 39.130 0.00 0.00 39.65 3.16
1425 1733 5.205056 ACTTTGGGTGATTTGAACCAGTTA 58.795 37.500 0.00 0.00 39.65 2.24
1426 1734 5.838521 ACTTTGGGTGATTTGAACCAGTTAT 59.161 36.000 0.00 0.00 39.65 1.89
1427 1735 7.007723 ACTTTGGGTGATTTGAACCAGTTATA 58.992 34.615 0.00 0.00 39.65 0.98
1428 1736 7.507616 ACTTTGGGTGATTTGAACCAGTTATAA 59.492 33.333 0.00 0.00 39.65 0.98
1429 1737 8.429237 TTTGGGTGATTTGAACCAGTTATAAT 57.571 30.769 0.00 0.00 39.65 1.28
1430 1738 7.403312 TGGGTGATTTGAACCAGTTATAATG 57.597 36.000 0.00 0.00 39.65 1.90
1431 1739 7.178573 TGGGTGATTTGAACCAGTTATAATGA 58.821 34.615 0.00 0.00 39.65 2.57
1432 1740 7.339212 TGGGTGATTTGAACCAGTTATAATGAG 59.661 37.037 0.00 0.00 39.65 2.90
1433 1741 7.196331 GGTGATTTGAACCAGTTATAATGAGC 58.804 38.462 0.00 0.00 37.65 4.26
1434 1742 7.196331 GTGATTTGAACCAGTTATAATGAGCC 58.804 38.462 0.00 0.00 0.00 4.70
1435 1743 7.067494 GTGATTTGAACCAGTTATAATGAGCCT 59.933 37.037 0.00 0.00 0.00 4.58
1436 1744 6.757897 TTTGAACCAGTTATAATGAGCCTG 57.242 37.500 0.00 0.00 0.00 4.85
1442 1750 5.942236 ACCAGTTATAATGAGCCTGCATATG 59.058 40.000 0.00 0.00 0.00 1.78
1443 1751 5.356190 CCAGTTATAATGAGCCTGCATATGG 59.644 44.000 4.56 0.00 0.00 2.74
1445 1753 5.251468 AGTTATAATGAGCCTGCATATGGGA 59.749 40.000 4.56 0.00 0.00 4.37
1446 1754 4.875578 ATAATGAGCCTGCATATGGGAT 57.124 40.909 4.56 0.00 0.00 3.85
1454 1762 3.117745 CCTGCATATGGGATGGATAGGA 58.882 50.000 4.56 0.00 0.00 2.94
1464 1772 4.287845 TGGGATGGATAGGAGAATGTGATG 59.712 45.833 0.00 0.00 0.00 3.07
1474 1782 3.314635 GGAGAATGTGATGCAGTTGGATC 59.685 47.826 6.67 6.67 42.33 3.36
1475 1783 4.197750 GAGAATGTGATGCAGTTGGATCT 58.802 43.478 13.60 0.00 42.45 2.75
1476 1784 4.597004 AGAATGTGATGCAGTTGGATCTT 58.403 39.130 13.60 1.70 42.45 2.40
1477 1785 4.398358 AGAATGTGATGCAGTTGGATCTTG 59.602 41.667 13.60 0.00 42.45 3.02
1478 1786 2.439409 TGTGATGCAGTTGGATCTTGG 58.561 47.619 13.60 0.00 42.45 3.61
1479 1787 2.040145 TGTGATGCAGTTGGATCTTGGA 59.960 45.455 13.60 0.00 42.45 3.53
1480 1788 3.285484 GTGATGCAGTTGGATCTTGGAT 58.715 45.455 13.60 0.00 42.45 3.41
1490 1798 2.371179 TGGATCTTGGATGGATCTGAGC 59.629 50.000 0.00 0.00 39.41 4.26
1491 1799 2.371179 GGATCTTGGATGGATCTGAGCA 59.629 50.000 0.00 0.00 39.41 4.26
1492 1800 3.009253 GGATCTTGGATGGATCTGAGCAT 59.991 47.826 0.00 0.00 39.41 3.79
1501 1809 3.358118 TGGATCTGAGCATGCAAAATGA 58.642 40.909 21.98 10.58 0.00 2.57
1502 1810 3.764972 TGGATCTGAGCATGCAAAATGAA 59.235 39.130 21.98 0.00 0.00 2.57
1504 1812 4.142227 GGATCTGAGCATGCAAAATGAACT 60.142 41.667 21.98 0.00 0.00 3.01
1505 1813 4.168922 TCTGAGCATGCAAAATGAACTG 57.831 40.909 21.98 4.94 0.00 3.16
1506 1814 3.570975 TCTGAGCATGCAAAATGAACTGT 59.429 39.130 21.98 0.00 0.00 3.55
1507 1815 4.038282 TCTGAGCATGCAAAATGAACTGTT 59.962 37.500 21.98 0.00 0.00 3.16
1524 1832 1.203523 TGTTTGTTTTGCTTCGCAGGT 59.796 42.857 0.00 0.00 40.61 4.00
1525 1833 1.852280 GTTTGTTTTGCTTCGCAGGTC 59.148 47.619 0.00 0.00 40.61 3.85
1526 1834 0.383949 TTGTTTTGCTTCGCAGGTCC 59.616 50.000 0.00 0.00 40.61 4.46
1543 1851 3.709653 AGGTCCGTTTGCCATCTAAGATA 59.290 43.478 0.00 0.00 0.00 1.98
1606 1914 3.628942 CGGCAGAGAATTTTGATGATGGA 59.371 43.478 0.00 0.00 0.00 3.41
1630 1938 1.002274 AGAGGAACCCGAGCATCCT 59.998 57.895 0.00 0.00 46.14 3.24
1646 1954 6.652481 CGAGCATCCTGATATGAAGGTATTTT 59.348 38.462 1.82 0.00 36.14 1.82
1648 1960 8.174733 AGCATCCTGATATGAAGGTATTTTTG 57.825 34.615 1.82 0.00 36.14 2.44
1649 1961 6.865205 GCATCCTGATATGAAGGTATTTTTGC 59.135 38.462 1.82 0.00 36.14 3.68
1652 1964 8.593945 TCCTGATATGAAGGTATTTTTGCTTT 57.406 30.769 1.82 0.00 36.14 3.51
1662 1974 6.762333 AGGTATTTTTGCTTTTCTCTGCAAT 58.238 32.000 0.00 0.00 46.55 3.56
1680 1993 4.341366 CAATTTTTGCTTCTCTTGGGGT 57.659 40.909 0.00 0.00 0.00 4.95
1681 1994 5.467035 CAATTTTTGCTTCTCTTGGGGTA 57.533 39.130 0.00 0.00 0.00 3.69
1682 1995 5.852827 CAATTTTTGCTTCTCTTGGGGTAA 58.147 37.500 0.00 0.00 0.00 2.85
1683 1996 5.728637 ATTTTTGCTTCTCTTGGGGTAAG 57.271 39.130 0.00 0.00 37.76 2.34
1860 2260 5.459505 ACATATCTAGTGCTGGGTAGACTT 58.540 41.667 0.00 0.00 0.00 3.01
2039 2445 8.407832 CCTTGTGTGATGCAATTTCTATATTCA 58.592 33.333 0.00 0.00 0.00 2.57
2052 2458 5.635417 TCTATATTCAGCATCTGGAGTCG 57.365 43.478 0.00 0.00 31.51 4.18
2064 2470 4.819105 TCTGGAGTCGACATGGTAAAAT 57.181 40.909 19.50 0.00 0.00 1.82
2069 2475 7.827236 TCTGGAGTCGACATGGTAAAATTATTT 59.173 33.333 19.50 0.00 0.00 1.40
2070 2476 7.757526 TGGAGTCGACATGGTAAAATTATTTG 58.242 34.615 19.50 0.00 0.00 2.32
2071 2477 7.392113 TGGAGTCGACATGGTAAAATTATTTGT 59.608 33.333 19.50 0.00 0.00 2.83
2072 2478 8.241367 GGAGTCGACATGGTAAAATTATTTGTT 58.759 33.333 19.50 0.00 0.00 2.83
2073 2479 8.964420 AGTCGACATGGTAAAATTATTTGTTG 57.036 30.769 19.50 0.00 0.00 3.33
2074 2480 8.788806 AGTCGACATGGTAAAATTATTTGTTGA 58.211 29.630 19.50 0.00 0.00 3.18
2075 2481 9.400638 GTCGACATGGTAAAATTATTTGTTGAA 57.599 29.630 11.55 0.00 0.00 2.69
2076 2482 9.400638 TCGACATGGTAAAATTATTTGTTGAAC 57.599 29.630 0.00 0.00 0.00 3.18
2108 2514 1.154225 GATGCCGCTTTGGTCAACG 60.154 57.895 0.00 0.00 41.21 4.10
2123 2529 3.067106 GTCAACGAAGGCAGATGAAGAA 58.933 45.455 0.00 0.00 0.00 2.52
2195 2601 3.780294 ACCCTGATTTGTATGCACCTCTA 59.220 43.478 0.00 0.00 0.00 2.43
2259 2665 9.364989 GTTTGCCTTCATATTCTCTAGCTATAG 57.635 37.037 0.00 0.00 0.00 1.31
2287 2693 3.765511 ACGTACCAGCCTGTAAAGTATGA 59.234 43.478 5.44 0.00 0.00 2.15
2290 2696 3.951663 ACCAGCCTGTAAAGTATGAACC 58.048 45.455 0.00 0.00 0.00 3.62
2292 2698 3.308117 CCAGCCTGTAAAGTATGAACCCA 60.308 47.826 0.00 0.00 0.00 4.51
2305 2711 3.334583 TGAACCCACTCATCTAACTGC 57.665 47.619 0.00 0.00 0.00 4.40
2465 2872 9.785982 GAGAGGCTTCTTAAGGTTTTCATATAT 57.214 33.333 0.00 0.00 32.53 0.86
2483 2890 7.232910 TCATATATCATGATGGAGCAAAACCA 58.767 34.615 18.72 0.00 41.83 3.67
2507 2914 5.689383 TTTTTCATTCTCCGGAGTTGAAG 57.311 39.130 31.86 20.82 35.15 3.02
2543 2950 3.877508 CCGAGGGATGGTTTATGAAACTC 59.122 47.826 2.39 0.00 41.14 3.01
2781 3188 1.670811 GCCATGACTGGGTATGTTTCG 59.329 52.381 0.00 0.00 43.36 3.46
2784 3191 3.595173 CATGACTGGGTATGTTTCGTCA 58.405 45.455 0.00 0.00 36.06 4.35
2788 3195 3.334691 ACTGGGTATGTTTCGTCACATG 58.665 45.455 11.12 0.00 37.93 3.21
2801 5541 4.388485 TCGTCACATGCCTGCATATTTAT 58.612 39.130 3.98 0.00 34.91 1.40
2807 5547 6.546772 TCACATGCCTGCATATTTATCTTTGA 59.453 34.615 3.98 0.00 34.91 2.69
2808 5548 7.068470 TCACATGCCTGCATATTTATCTTTGAA 59.932 33.333 3.98 0.00 34.91 2.69
2809 5549 7.381408 CACATGCCTGCATATTTATCTTTGAAG 59.619 37.037 3.98 0.00 34.91 3.02
2811 5551 7.268199 TGCCTGCATATTTATCTTTGAAGAG 57.732 36.000 0.00 0.00 38.66 2.85
2812 5552 6.830324 TGCCTGCATATTTATCTTTGAAGAGT 59.170 34.615 0.00 0.00 38.66 3.24
2814 5554 7.012704 GCCTGCATATTTATCTTTGAAGAGTCA 59.987 37.037 0.00 0.00 38.66 3.41
2817 5557 9.453572 TGCATATTTATCTTTGAAGAGTCACTT 57.546 29.630 0.00 0.00 42.03 3.16
2832 5572 9.959775 GAAGAGTCACTTAAATAAAATCAGACG 57.040 33.333 0.00 0.00 39.13 4.18
2834 5574 9.141400 AGAGTCACTTAAATAAAATCAGACGAC 57.859 33.333 0.00 0.00 0.00 4.34
2835 5575 9.141400 GAGTCACTTAAATAAAATCAGACGACT 57.859 33.333 0.00 0.00 0.00 4.18
2837 5577 8.709646 GTCACTTAAATAAAATCAGACGACTGT 58.290 33.333 14.38 0.00 43.81 3.55
2839 5579 9.878599 CACTTAAATAAAATCAGACGACTGTTT 57.121 29.630 14.38 9.76 43.81 2.83
2851 5591 9.871238 ATCAGACGACTGTTTATAATTACAAGT 57.129 29.630 14.38 0.00 43.81 3.16
2852 5592 9.135843 TCAGACGACTGTTTATAATTACAAGTG 57.864 33.333 14.38 0.00 43.81 3.16
2955 5964 5.171339 ACACCATCAAAGCTCTCTGTAAT 57.829 39.130 0.00 0.00 0.00 1.89
2985 5994 1.702957 TCAGAAGGGGTTTTCATCCGT 59.297 47.619 0.00 0.00 0.00 4.69
2991 6000 1.173913 GGGTTTTCATCCGTGGAAGG 58.826 55.000 0.00 0.00 0.00 3.46
3051 6060 2.227865 GAGACCTGTGAGAGATATCGGC 59.772 54.545 0.00 0.00 0.00 5.54
3339 6348 1.404035 GACAACTTTGTGCTCCCGTTT 59.596 47.619 0.00 0.00 42.43 3.60
3579 6593 2.289444 GGTGCACCAAGTAGAGCAGTAA 60.289 50.000 31.23 0.00 37.72 2.24
3584 6598 4.321750 GCACCAAGTAGAGCAGTAACAGTA 60.322 45.833 0.00 0.00 0.00 2.74
3585 6599 5.403246 CACCAAGTAGAGCAGTAACAGTAG 58.597 45.833 0.00 0.00 0.00 2.57
3596 6614 6.123651 AGCAGTAACAGTAGAGCACTATAGT 58.876 40.000 0.00 0.00 34.98 2.12
3601 6619 8.215050 AGTAACAGTAGAGCACTATAGTCATCT 58.785 37.037 16.71 16.71 34.98 2.90
3633 6655 6.010850 TCAGGTAAGCTCTTTAGTCTGAAGA 58.989 40.000 6.87 6.87 33.49 2.87
3693 7361 9.662947 ACACTTGTAGTATTCTAATTGTAACCC 57.337 33.333 0.00 0.00 0.00 4.11
3696 7364 9.760077 CTTGTAGTATTCTAATTGTAACCCGAT 57.240 33.333 0.00 0.00 0.00 4.18
3787 7455 3.426159 GGCGACAGAACATTTACATGTGG 60.426 47.826 9.11 0.00 43.34 4.17
3788 7456 3.435327 GCGACAGAACATTTACATGTGGA 59.565 43.478 9.11 0.00 43.34 4.02
3789 7457 4.094887 GCGACAGAACATTTACATGTGGAT 59.905 41.667 9.11 0.00 43.34 3.41
3790 7458 5.562917 CGACAGAACATTTACATGTGGATG 58.437 41.667 9.11 14.19 43.34 3.51
3791 7459 5.122239 CGACAGAACATTTACATGTGGATGT 59.878 40.000 17.98 17.98 43.34 3.06
3792 7460 6.312672 CGACAGAACATTTACATGTGGATGTA 59.687 38.462 21.73 0.00 43.34 2.29
3793 7461 7.011389 CGACAGAACATTTACATGTGGATGTAT 59.989 37.037 21.73 14.32 43.34 2.29
3794 7462 9.325198 GACAGAACATTTACATGTGGATGTATA 57.675 33.333 21.73 0.00 43.34 1.47
3795 7463 9.330063 ACAGAACATTTACATGTGGATGTATAG 57.670 33.333 21.73 17.26 43.34 1.31
3796 7464 8.777413 CAGAACATTTACATGTGGATGTATAGG 58.223 37.037 21.73 12.40 43.34 2.57
3797 7465 8.494433 AGAACATTTACATGTGGATGTATAGGT 58.506 33.333 21.73 11.15 43.34 3.08
3798 7466 8.677148 AACATTTACATGTGGATGTATAGGTC 57.323 34.615 21.73 0.00 43.34 3.85
3799 7467 6.929049 ACATTTACATGTGGATGTATAGGTCG 59.071 38.462 20.70 0.78 43.22 4.79
3800 7468 6.718522 TTTACATGTGGATGTATAGGTCGA 57.281 37.500 9.11 0.00 43.22 4.20
3801 7469 6.718522 TTACATGTGGATGTATAGGTCGAA 57.281 37.500 9.11 0.00 43.22 3.71
3802 7470 4.945246 ACATGTGGATGTATAGGTCGAAC 58.055 43.478 0.00 0.00 41.27 3.95
3803 7471 4.202223 ACATGTGGATGTATAGGTCGAACC 60.202 45.833 0.00 0.00 41.27 3.62
3804 7472 3.367321 TGTGGATGTATAGGTCGAACCA 58.633 45.455 0.00 0.00 41.95 3.67
3805 7473 3.770388 TGTGGATGTATAGGTCGAACCAA 59.230 43.478 0.00 0.00 41.95 3.67
3806 7474 4.117685 GTGGATGTATAGGTCGAACCAAC 58.882 47.826 0.00 0.00 41.95 3.77
3807 7475 4.028131 TGGATGTATAGGTCGAACCAACT 58.972 43.478 0.00 0.00 41.95 3.16
3808 7476 5.068198 GTGGATGTATAGGTCGAACCAACTA 59.932 44.000 0.00 0.00 41.95 2.24
3809 7477 5.657745 TGGATGTATAGGTCGAACCAACTAA 59.342 40.000 0.00 0.00 41.95 2.24
3810 7478 5.981915 GGATGTATAGGTCGAACCAACTAAC 59.018 44.000 0.00 0.00 41.95 2.34
3811 7479 5.981088 TGTATAGGTCGAACCAACTAACA 57.019 39.130 0.00 0.00 41.95 2.41
3812 7480 5.957798 TGTATAGGTCGAACCAACTAACAG 58.042 41.667 0.00 0.00 41.95 3.16
3813 7481 5.711506 TGTATAGGTCGAACCAACTAACAGA 59.288 40.000 0.00 0.00 41.95 3.41
3814 7482 5.733620 ATAGGTCGAACCAACTAACAGAA 57.266 39.130 0.00 0.00 41.95 3.02
3815 7483 4.411256 AGGTCGAACCAACTAACAGAAA 57.589 40.909 0.00 0.00 41.95 2.52
3816 7484 4.124970 AGGTCGAACCAACTAACAGAAAC 58.875 43.478 0.00 0.00 41.95 2.78
3817 7485 3.872771 GGTCGAACCAACTAACAGAAACA 59.127 43.478 0.00 0.00 38.42 2.83
3818 7486 4.514066 GGTCGAACCAACTAACAGAAACAT 59.486 41.667 0.00 0.00 38.42 2.71
3819 7487 5.697633 GGTCGAACCAACTAACAGAAACATA 59.302 40.000 0.00 0.00 38.42 2.29
3820 7488 6.370718 GGTCGAACCAACTAACAGAAACATAT 59.629 38.462 0.00 0.00 38.42 1.78
3821 7489 7.546667 GGTCGAACCAACTAACAGAAACATATA 59.453 37.037 0.00 0.00 38.42 0.86
3822 7490 8.928733 GTCGAACCAACTAACAGAAACATATAA 58.071 33.333 0.00 0.00 0.00 0.98
3823 7491 8.928733 TCGAACCAACTAACAGAAACATATAAC 58.071 33.333 0.00 0.00 0.00 1.89
3824 7492 8.932791 CGAACCAACTAACAGAAACATATAACT 58.067 33.333 0.00 0.00 0.00 2.24
3899 7567 4.604156 ACAGAGACAGAGACATATGACCA 58.396 43.478 10.38 0.00 0.00 4.02
3900 7568 4.644234 ACAGAGACAGAGACATATGACCAG 59.356 45.833 10.38 0.00 0.00 4.00
3903 7571 6.319911 CAGAGACAGAGACATATGACCAGTAA 59.680 42.308 10.38 0.00 0.00 2.24
3904 7572 6.545666 AGAGACAGAGACATATGACCAGTAAG 59.454 42.308 10.38 0.00 0.00 2.34
3905 7573 6.427441 AGACAGAGACATATGACCAGTAAGA 58.573 40.000 10.38 0.00 0.00 2.10
3907 7575 7.230510 AGACAGAGACATATGACCAGTAAGATC 59.769 40.741 10.38 0.00 0.00 2.75
3908 7576 6.266558 ACAGAGACATATGACCAGTAAGATCC 59.733 42.308 10.38 0.00 0.00 3.36
3910 7578 6.493115 AGAGACATATGACCAGTAAGATCCTG 59.507 42.308 10.38 0.00 0.00 3.86
3911 7579 6.377080 AGACATATGACCAGTAAGATCCTGA 58.623 40.000 10.38 0.00 31.38 3.86
3912 7580 6.841229 AGACATATGACCAGTAAGATCCTGAA 59.159 38.462 10.38 0.00 31.38 3.02
3913 7581 6.821388 ACATATGACCAGTAAGATCCTGAAC 58.179 40.000 10.38 0.00 31.38 3.18
3914 7582 4.762289 ATGACCAGTAAGATCCTGAACC 57.238 45.455 0.00 0.00 31.38 3.62
3917 7585 5.338632 TGACCAGTAAGATCCTGAACCTAA 58.661 41.667 0.00 0.00 31.38 2.69
3919 7587 4.717280 ACCAGTAAGATCCTGAACCTAAGG 59.283 45.833 0.00 0.00 36.02 2.69
3921 7589 5.163395 CCAGTAAGATCCTGAACCTAAGGTC 60.163 48.000 0.00 0.00 33.12 3.85
3922 7590 4.645588 AGTAAGATCCTGAACCTAAGGTCG 59.354 45.833 0.00 0.00 33.12 4.79
3924 7592 4.246712 AGATCCTGAACCTAAGGTCGTA 57.753 45.455 0.00 0.00 33.12 3.43
3925 7593 4.607239 AGATCCTGAACCTAAGGTCGTAA 58.393 43.478 0.00 0.00 33.12 3.18
3926 7594 4.401837 AGATCCTGAACCTAAGGTCGTAAC 59.598 45.833 0.00 0.00 33.12 2.50
3928 7596 3.508793 TCCTGAACCTAAGGTCGTAACTG 59.491 47.826 0.00 0.00 33.12 3.16
3958 7866 7.231317 GTGATTCATCTAGGTGAAGATCTCTCT 59.769 40.741 22.31 4.38 41.05 3.10
4011 7922 1.331756 CACAGTCCAGCACAACAACTC 59.668 52.381 0.00 0.00 0.00 3.01
4016 7927 4.335315 CAGTCCAGCACAACAACTCTAAAA 59.665 41.667 0.00 0.00 0.00 1.52
4019 7930 5.008613 GTCCAGCACAACAACTCTAAAATGA 59.991 40.000 0.00 0.00 0.00 2.57
4028 7939 6.128138 ACAACTCTAAAATGAGCCTAAGGT 57.872 37.500 0.00 0.00 37.58 3.50
4048 7959 4.157840 AGGTCGCCTAACCAAAATTTGATC 59.842 41.667 7.37 0.00 42.12 2.92
4060 7971 9.563748 AACCAAAATTTGATCATCTTCATTTGT 57.436 25.926 7.37 0.00 28.20 2.83
4067 7978 6.441093 TGATCATCTTCATTTGTGCTAACC 57.559 37.500 0.00 0.00 0.00 2.85
4068 8119 5.945191 TGATCATCTTCATTTGTGCTAACCA 59.055 36.000 0.00 0.00 0.00 3.67
4069 8120 5.885230 TCATCTTCATTTGTGCTAACCAG 57.115 39.130 0.00 0.00 0.00 4.00
4120 8252 7.501559 AGATTACAATTTATCTGAGCACAGCAT 59.498 33.333 6.24 4.15 43.17 3.79
4136 8268 1.004044 AGCATGGTTCAGGAACAGAGG 59.996 52.381 13.62 3.26 42.85 3.69
4143 8275 6.636454 TGGTTCAGGAACAGAGGTATAAAT 57.364 37.500 13.62 0.00 42.85 1.40
4144 8276 6.414732 TGGTTCAGGAACAGAGGTATAAATG 58.585 40.000 13.62 0.00 42.85 2.32
4145 8277 5.297029 GGTTCAGGAACAGAGGTATAAATGC 59.703 44.000 13.62 0.00 42.85 3.56
4146 8278 5.036117 TCAGGAACAGAGGTATAAATGCC 57.964 43.478 0.00 0.00 0.00 4.40
4165 8301 5.649782 TGCCTTTCTTTTGATTGGAGATC 57.350 39.130 0.00 0.00 0.00 2.75
4197 8333 9.661563 TTTCTTTCTGTTTTTAGACAGTGTAGA 57.338 29.630 0.00 0.00 45.64 2.59
4198 8334 9.832445 TTCTTTCTGTTTTTAGACAGTGTAGAT 57.168 29.630 0.00 0.00 45.64 1.98
4200 8336 7.421530 TTCTGTTTTTAGACAGTGTAGATGC 57.578 36.000 0.00 0.00 45.64 3.91
4201 8337 6.521162 TCTGTTTTTAGACAGTGTAGATGCA 58.479 36.000 0.00 0.00 45.64 3.96
4203 8339 7.118245 TCTGTTTTTAGACAGTGTAGATGCATG 59.882 37.037 2.46 0.00 45.64 4.06
4204 8340 5.801350 TTTTAGACAGTGTAGATGCATGC 57.199 39.130 11.82 11.82 0.00 4.06
4208 8344 5.089970 AGACAGTGTAGATGCATGCTTTA 57.910 39.130 20.33 5.79 0.00 1.85
4210 8346 5.757320 AGACAGTGTAGATGCATGCTTTATC 59.243 40.000 20.33 13.52 0.00 1.75
4222 8358 7.542534 TGCATGCTTTATCATTTGGATTTTC 57.457 32.000 20.33 0.00 37.44 2.29
4233 8397 4.396357 TTTGGATTTTCTTAGCCTCCCA 57.604 40.909 0.00 0.00 0.00 4.37
4246 8410 3.837355 AGCCTCCCATTTGATATGTTCC 58.163 45.455 0.00 0.00 0.00 3.62
4265 8429 8.647143 ATGTTCCATAGTTTCTTTTGTTTGTG 57.353 30.769 0.00 0.00 0.00 3.33
4272 8436 6.844097 AGTTTCTTTTGTTTGTGGGAGTTA 57.156 33.333 0.00 0.00 0.00 2.24
4273 8437 7.234661 AGTTTCTTTTGTTTGTGGGAGTTAA 57.765 32.000 0.00 0.00 0.00 2.01
4365 8529 6.972328 GTGTGCTTCATTTGTTAAGAGTTGAA 59.028 34.615 0.00 1.23 0.00 2.69
4366 8530 7.649306 GTGTGCTTCATTTGTTAAGAGTTGAAT 59.351 33.333 0.00 0.00 0.00 2.57
4367 8531 7.648908 TGTGCTTCATTTGTTAAGAGTTGAATG 59.351 33.333 0.00 0.00 0.00 2.67
4369 8533 6.089954 GCTTCATTTGTTAAGAGTTGAATGGC 59.910 38.462 0.00 0.29 0.00 4.40
4370 8534 6.647334 TCATTTGTTAAGAGTTGAATGGCA 57.353 33.333 0.00 0.00 0.00 4.92
4371 8535 7.230849 TCATTTGTTAAGAGTTGAATGGCAT 57.769 32.000 0.00 0.00 0.00 4.40
4372 8536 8.347004 TCATTTGTTAAGAGTTGAATGGCATA 57.653 30.769 0.00 0.00 0.00 3.14
4373 8537 8.970020 TCATTTGTTAAGAGTTGAATGGCATAT 58.030 29.630 0.00 0.00 0.00 1.78
4374 8538 9.590451 CATTTGTTAAGAGTTGAATGGCATATT 57.410 29.630 0.00 0.00 0.00 1.28
4375 8539 9.807649 ATTTGTTAAGAGTTGAATGGCATATTC 57.192 29.630 0.00 0.00 0.00 1.75
4376 8540 7.333528 TGTTAAGAGTTGAATGGCATATTCC 57.666 36.000 0.00 0.00 0.00 3.01
4377 8541 6.889177 TGTTAAGAGTTGAATGGCATATTCCA 59.111 34.615 0.00 0.00 40.97 3.53
4386 8550 3.439857 TGGCATATTCCATTAGCCTCC 57.560 47.619 0.00 0.00 45.42 4.30
4387 8551 2.041620 TGGCATATTCCATTAGCCTCCC 59.958 50.000 0.00 0.00 45.42 4.30
4388 8552 2.310052 GGCATATTCCATTAGCCTCCCT 59.690 50.000 0.00 0.00 42.01 4.20
4389 8553 3.350833 GCATATTCCATTAGCCTCCCTG 58.649 50.000 0.00 0.00 0.00 4.45
4390 8554 3.245052 GCATATTCCATTAGCCTCCCTGT 60.245 47.826 0.00 0.00 0.00 4.00
4391 8555 4.751028 GCATATTCCATTAGCCTCCCTGTT 60.751 45.833 0.00 0.00 0.00 3.16
4392 8556 2.806945 TTCCATTAGCCTCCCTGTTG 57.193 50.000 0.00 0.00 0.00 3.33
4393 8557 1.965414 TCCATTAGCCTCCCTGTTGA 58.035 50.000 0.00 0.00 0.00 3.18
4394 8558 2.492025 TCCATTAGCCTCCCTGTTGAT 58.508 47.619 0.00 0.00 0.00 2.57
4395 8559 3.664320 TCCATTAGCCTCCCTGTTGATA 58.336 45.455 0.00 0.00 0.00 2.15
4396 8560 4.242811 TCCATTAGCCTCCCTGTTGATAT 58.757 43.478 0.00 0.00 0.00 1.63
4397 8561 4.042062 TCCATTAGCCTCCCTGTTGATATG 59.958 45.833 0.00 0.00 0.00 1.78
4398 8562 4.202503 CCATTAGCCTCCCTGTTGATATGT 60.203 45.833 0.00 0.00 0.00 2.29
4399 8563 4.689612 TTAGCCTCCCTGTTGATATGTC 57.310 45.455 0.00 0.00 0.00 3.06
4400 8564 1.771255 AGCCTCCCTGTTGATATGTCC 59.229 52.381 0.00 0.00 0.00 4.02
4401 8565 1.771255 GCCTCCCTGTTGATATGTCCT 59.229 52.381 0.00 0.00 0.00 3.85
4402 8566 2.486191 GCCTCCCTGTTGATATGTCCTG 60.486 54.545 0.00 0.00 0.00 3.86
4403 8567 2.105477 CCTCCCTGTTGATATGTCCTGG 59.895 54.545 0.00 0.00 0.00 4.45
4404 8568 2.105477 CTCCCTGTTGATATGTCCTGGG 59.895 54.545 0.00 4.93 34.98 4.45
4405 8569 1.846439 CCCTGTTGATATGTCCTGGGT 59.154 52.381 0.00 0.00 0.00 4.51
4406 8570 2.242196 CCCTGTTGATATGTCCTGGGTT 59.758 50.000 0.00 0.00 0.00 4.11
4407 8571 3.545703 CCTGTTGATATGTCCTGGGTTC 58.454 50.000 0.00 0.00 0.00 3.62
4408 8572 3.200825 CCTGTTGATATGTCCTGGGTTCT 59.799 47.826 0.00 0.00 0.00 3.01
4409 8573 4.324563 CCTGTTGATATGTCCTGGGTTCTT 60.325 45.833 0.00 0.00 0.00 2.52
4410 8574 4.588899 TGTTGATATGTCCTGGGTTCTTG 58.411 43.478 0.00 0.00 0.00 3.02
4411 8575 4.042809 TGTTGATATGTCCTGGGTTCTTGT 59.957 41.667 0.00 0.00 0.00 3.16
4412 8576 5.249622 TGTTGATATGTCCTGGGTTCTTGTA 59.750 40.000 0.00 0.00 0.00 2.41
4413 8577 6.069673 TGTTGATATGTCCTGGGTTCTTGTAT 60.070 38.462 0.00 0.00 0.00 2.29
4414 8578 7.126573 TGTTGATATGTCCTGGGTTCTTGTATA 59.873 37.037 0.00 0.00 0.00 1.47
4415 8579 7.872061 TGATATGTCCTGGGTTCTTGTATAT 57.128 36.000 0.00 0.00 0.00 0.86
4416 8580 8.275187 TGATATGTCCTGGGTTCTTGTATATT 57.725 34.615 0.00 0.00 0.00 1.28
4417 8581 8.375506 TGATATGTCCTGGGTTCTTGTATATTC 58.624 37.037 0.00 0.00 0.00 1.75
4418 8582 5.367945 TGTCCTGGGTTCTTGTATATTCC 57.632 43.478 0.00 0.00 0.00 3.01
4419 8583 4.165372 TGTCCTGGGTTCTTGTATATTCCC 59.835 45.833 0.00 0.00 35.85 3.97
4420 8584 4.412528 GTCCTGGGTTCTTGTATATTCCCT 59.587 45.833 0.00 0.00 36.23 4.20
4421 8585 4.658901 TCCTGGGTTCTTGTATATTCCCTC 59.341 45.833 0.00 0.00 36.23 4.30
4422 8586 4.412199 CCTGGGTTCTTGTATATTCCCTCA 59.588 45.833 0.00 0.00 36.23 3.86
4423 8587 5.104109 CCTGGGTTCTTGTATATTCCCTCAA 60.104 44.000 0.00 0.00 36.23 3.02
4424 8588 5.751586 TGGGTTCTTGTATATTCCCTCAAC 58.248 41.667 0.00 0.00 36.23 3.18
4425 8589 5.251932 TGGGTTCTTGTATATTCCCTCAACA 59.748 40.000 0.00 0.00 36.23 3.33
4426 8590 6.069088 TGGGTTCTTGTATATTCCCTCAACAT 60.069 38.462 0.00 0.00 36.23 2.71
4427 8591 6.833933 GGGTTCTTGTATATTCCCTCAACATT 59.166 38.462 0.00 0.00 32.89 2.71
4428 8592 7.342026 GGGTTCTTGTATATTCCCTCAACATTT 59.658 37.037 0.00 0.00 32.89 2.32
4429 8593 9.403583 GGTTCTTGTATATTCCCTCAACATTTA 57.596 33.333 0.00 0.00 0.00 1.40
4432 8596 9.066892 TCTTGTATATTCCCTCAACATTTATGC 57.933 33.333 0.00 0.00 0.00 3.14
4433 8597 7.433708 TGTATATTCCCTCAACATTTATGCG 57.566 36.000 0.00 0.00 0.00 4.73
4434 8598 7.220740 TGTATATTCCCTCAACATTTATGCGA 58.779 34.615 0.00 0.00 0.00 5.10
4435 8599 4.900635 ATTCCCTCAACATTTATGCGAC 57.099 40.909 0.00 0.00 0.00 5.19
4436 8600 2.639065 TCCCTCAACATTTATGCGACC 58.361 47.619 0.00 0.00 0.00 4.79
4437 8601 2.238646 TCCCTCAACATTTATGCGACCT 59.761 45.455 0.00 0.00 0.00 3.85
4438 8602 2.614057 CCCTCAACATTTATGCGACCTC 59.386 50.000 0.00 0.00 0.00 3.85
4439 8603 3.270027 CCTCAACATTTATGCGACCTCA 58.730 45.455 0.00 0.00 0.00 3.86
4440 8604 3.689161 CCTCAACATTTATGCGACCTCAA 59.311 43.478 0.00 0.00 0.00 3.02
4441 8605 4.155826 CCTCAACATTTATGCGACCTCAAA 59.844 41.667 0.00 0.00 0.00 2.69
4442 8606 5.041951 TCAACATTTATGCGACCTCAAAC 57.958 39.130 0.00 0.00 0.00 2.93
4443 8607 4.517075 TCAACATTTATGCGACCTCAAACA 59.483 37.500 0.00 0.00 0.00 2.83
4444 8608 5.009110 TCAACATTTATGCGACCTCAAACAA 59.991 36.000 0.00 0.00 0.00 2.83
4445 8609 5.643379 ACATTTATGCGACCTCAAACAAT 57.357 34.783 0.00 0.00 0.00 2.71
4446 8610 6.751514 ACATTTATGCGACCTCAAACAATA 57.248 33.333 0.00 0.00 0.00 1.90
4447 8611 6.551736 ACATTTATGCGACCTCAAACAATAC 58.448 36.000 0.00 0.00 0.00 1.89
4448 8612 6.374333 ACATTTATGCGACCTCAAACAATACT 59.626 34.615 0.00 0.00 0.00 2.12
4449 8613 7.551262 ACATTTATGCGACCTCAAACAATACTA 59.449 33.333 0.00 0.00 0.00 1.82
4450 8614 8.559536 CATTTATGCGACCTCAAACAATACTAT 58.440 33.333 0.00 0.00 0.00 2.12
4451 8615 9.772973 ATTTATGCGACCTCAAACAATACTATA 57.227 29.630 0.00 0.00 0.00 1.31
4452 8616 9.602568 TTTATGCGACCTCAAACAATACTATAA 57.397 29.630 0.00 0.00 0.00 0.98
4453 8617 9.602568 TTATGCGACCTCAAACAATACTATAAA 57.397 29.630 0.00 0.00 0.00 1.40
4454 8618 8.677148 ATGCGACCTCAAACAATACTATAAAT 57.323 30.769 0.00 0.00 0.00 1.40
4455 8619 8.500753 TGCGACCTCAAACAATACTATAAATT 57.499 30.769 0.00 0.00 0.00 1.82
4456 8620 8.609176 TGCGACCTCAAACAATACTATAAATTC 58.391 33.333 0.00 0.00 0.00 2.17
4457 8621 8.609176 GCGACCTCAAACAATACTATAAATTCA 58.391 33.333 0.00 0.00 0.00 2.57
4476 8640 8.977267 AAATTCAGTAGGAGACTATACGTACT 57.023 34.615 0.00 0.00 46.56 2.73
4478 8642 9.487790 AATTCAGTAGGAGACTATACGTACTAC 57.512 37.037 0.00 3.33 46.56 2.73
4479 8643 7.588497 TCAGTAGGAGACTATACGTACTACA 57.412 40.000 15.48 0.00 46.56 2.74
4480 8644 8.011844 TCAGTAGGAGACTATACGTACTACAA 57.988 38.462 15.48 4.97 46.56 2.41
4481 8645 8.646004 TCAGTAGGAGACTATACGTACTACAAT 58.354 37.037 15.48 0.00 46.56 2.71
4482 8646 9.270640 CAGTAGGAGACTATACGTACTACAATT 57.729 37.037 15.48 0.00 46.56 2.32
4483 8647 9.487790 AGTAGGAGACTATACGTACTACAATTC 57.512 37.037 15.48 2.83 46.56 2.17
4484 8648 9.265901 GTAGGAGACTATACGTACTACAATTCA 57.734 37.037 0.00 0.00 46.56 2.57
4485 8649 8.921353 AGGAGACTATACGTACTACAATTCAT 57.079 34.615 0.00 0.00 40.61 2.57
4486 8650 9.352191 AGGAGACTATACGTACTACAATTCATT 57.648 33.333 0.00 0.00 40.61 2.57
4487 8651 9.609950 GGAGACTATACGTACTACAATTCATTC 57.390 37.037 0.00 0.00 0.00 2.67
4490 8654 9.947669 GACTATACGTACTACAATTCATTCAGT 57.052 33.333 0.00 0.00 0.00 3.41
4495 8659 8.858003 ACGTACTACAATTCATTCAGTATCTG 57.142 34.615 0.00 0.00 0.00 2.90
4496 8660 8.683615 ACGTACTACAATTCATTCAGTATCTGA 58.316 33.333 0.00 0.00 38.87 3.27
4497 8661 9.684448 CGTACTACAATTCATTCAGTATCTGAT 57.316 33.333 0.24 0.00 40.39 2.90
4529 8693 8.470657 ACTATATGCTCATTCAGTAGAACAGA 57.529 34.615 0.00 0.00 36.39 3.41
4530 8694 9.087871 ACTATATGCTCATTCAGTAGAACAGAT 57.912 33.333 0.00 0.00 36.39 2.90
4533 8697 9.872721 ATATGCTCATTCAGTAGAACAGATATG 57.127 33.333 0.00 0.00 36.39 1.78
4534 8698 6.519382 TGCTCATTCAGTAGAACAGATATGG 58.481 40.000 0.00 0.00 36.39 2.74
4535 8699 6.324770 TGCTCATTCAGTAGAACAGATATGGA 59.675 38.462 0.00 0.00 36.39 3.41
4536 8700 7.147672 TGCTCATTCAGTAGAACAGATATGGAA 60.148 37.037 0.00 0.00 36.39 3.53
4537 8701 7.384660 GCTCATTCAGTAGAACAGATATGGAAG 59.615 40.741 0.00 0.00 36.39 3.46
4538 8702 8.539117 TCATTCAGTAGAACAGATATGGAAGA 57.461 34.615 0.00 0.00 36.39 2.87
4539 8703 8.981659 TCATTCAGTAGAACAGATATGGAAGAA 58.018 33.333 0.00 0.00 36.39 2.52
4540 8704 9.605275 CATTCAGTAGAACAGATATGGAAGAAA 57.395 33.333 0.00 0.00 36.39 2.52
4541 8705 9.829507 ATTCAGTAGAACAGATATGGAAGAAAG 57.170 33.333 0.00 0.00 36.39 2.62
4542 8706 8.595362 TCAGTAGAACAGATATGGAAGAAAGA 57.405 34.615 0.00 0.00 0.00 2.52
4543 8707 9.206690 TCAGTAGAACAGATATGGAAGAAAGAT 57.793 33.333 0.00 0.00 0.00 2.40
4558 8722 9.565090 TGGAAGAAAGATATCTGATAACAATGG 57.435 33.333 5.86 0.00 0.00 3.16
4559 8723 9.566432 GGAAGAAAGATATCTGATAACAATGGT 57.434 33.333 5.86 0.00 0.00 3.55
4565 8729 9.699410 AAGATATCTGATAACAATGGTTTTGGA 57.301 29.630 5.86 0.00 38.45 3.53
4566 8730 9.699410 AGATATCTGATAACAATGGTTTTGGAA 57.301 29.630 3.89 0.00 38.45 3.53
4567 8731 9.736023 GATATCTGATAACAATGGTTTTGGAAC 57.264 33.333 0.81 0.00 38.45 3.62
4568 8732 7.781324 ATCTGATAACAATGGTTTTGGAACT 57.219 32.000 0.00 0.00 38.45 3.01
4569 8733 6.980593 TCTGATAACAATGGTTTTGGAACTG 58.019 36.000 0.00 0.00 38.45 3.16
4570 8734 6.549364 TCTGATAACAATGGTTTTGGAACTGT 59.451 34.615 0.00 0.00 38.45 3.55
4571 8735 7.721842 TCTGATAACAATGGTTTTGGAACTGTA 59.278 33.333 0.00 0.00 38.45 2.74
4572 8736 7.653647 TGATAACAATGGTTTTGGAACTGTAC 58.346 34.615 0.00 0.00 38.45 2.90
4573 8737 5.923733 AACAATGGTTTTGGAACTGTACA 57.076 34.783 0.00 0.00 36.03 2.90
4574 8738 5.257082 ACAATGGTTTTGGAACTGTACAC 57.743 39.130 0.00 0.00 36.03 2.90
4575 8739 4.953579 ACAATGGTTTTGGAACTGTACACT 59.046 37.500 0.00 0.00 36.03 3.55
4576 8740 6.123651 ACAATGGTTTTGGAACTGTACACTA 58.876 36.000 0.00 0.00 36.03 2.74
4577 8741 6.775629 ACAATGGTTTTGGAACTGTACACTAT 59.224 34.615 0.00 0.00 36.03 2.12
4578 8742 6.817765 ATGGTTTTGGAACTGTACACTATG 57.182 37.500 0.00 0.00 36.03 2.23
4579 8743 5.067273 TGGTTTTGGAACTGTACACTATGG 58.933 41.667 0.00 0.00 36.03 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.298332 CCTCAACCTCCAAAAATCGTTTG 58.702 43.478 0.00 0.00 0.00 2.93
33 34 1.202348 GGCCTCAACCTCCAAAAATCG 59.798 52.381 0.00 0.00 0.00 3.34
112 113 2.037144 TGTACCGGGCCTCTCTATTTC 58.963 52.381 6.32 0.00 0.00 2.17
118 119 2.732619 CCCTTGTACCGGGCCTCTC 61.733 68.421 6.32 0.00 34.32 3.20
126 127 1.221021 GGAAGAGCCCCTTGTACCG 59.779 63.158 0.00 0.00 34.68 4.02
137 138 0.973496 AGGAGGAACGAGGGAAGAGC 60.973 60.000 0.00 0.00 0.00 4.09
142 143 2.038557 CTGAAAAAGGAGGAACGAGGGA 59.961 50.000 0.00 0.00 0.00 4.20
146 147 2.616842 GCAACTGAAAAAGGAGGAACGA 59.383 45.455 0.00 0.00 0.00 3.85
158 159 2.076100 CATCCACGCTAGCAACTGAAA 58.924 47.619 16.45 0.00 0.00 2.69
160 161 0.894835 TCATCCACGCTAGCAACTGA 59.105 50.000 16.45 6.92 0.00 3.41
161 162 1.394917 GTTCATCCACGCTAGCAACTG 59.605 52.381 16.45 6.31 0.00 3.16
165 166 2.401583 ATTGTTCATCCACGCTAGCA 57.598 45.000 16.45 0.00 0.00 3.49
187 188 0.598065 GAAGGAAATGGCACGCACTT 59.402 50.000 0.00 0.00 0.00 3.16
190 191 0.960364 GGAGAAGGAAATGGCACGCA 60.960 55.000 0.00 0.00 0.00 5.24
196 197 4.603131 TCCAATGAAGGAGAAGGAAATGG 58.397 43.478 0.00 0.00 32.77 3.16
276 277 1.389609 CGAAGAGGTAGGCGGGCTAA 61.390 60.000 13.32 0.00 0.00 3.09
353 354 1.609555 GGAGTGCTCGATAGTGGTAGG 59.390 57.143 0.00 0.00 37.40 3.18
379 380 3.293337 GGGTGGTTACAAAGGTTTGAGT 58.707 45.455 9.42 0.00 40.55 3.41
412 413 1.464376 CCATCTCGGGTATCAGCGGT 61.464 60.000 0.00 0.00 0.00 5.68
466 467 0.753262 GGATGTACGCATGGAGGAGT 59.247 55.000 0.00 0.00 35.07 3.85
478 479 1.480954 TCGGAAGGAGCAAGGATGTAC 59.519 52.381 0.00 0.00 0.00 2.90
502 503 2.672874 GCACGCAAATGATACACTCTCA 59.327 45.455 0.00 0.00 0.00 3.27
578 589 0.319986 TACACGAGGTCGCATTGCAA 60.320 50.000 9.69 0.00 44.43 4.08
579 590 0.108377 ATACACGAGGTCGCATTGCA 60.108 50.000 9.69 0.00 44.43 4.08
583 594 4.316205 TCATTTATACACGAGGTCGCAT 57.684 40.909 0.00 0.00 44.43 4.73
584 595 3.786516 TCATTTATACACGAGGTCGCA 57.213 42.857 0.00 0.00 44.43 5.10
585 596 4.608445 GCAATCATTTATACACGAGGTCGC 60.608 45.833 0.00 0.00 44.43 5.19
586 597 4.084537 GGCAATCATTTATACACGAGGTCG 60.085 45.833 0.00 0.00 46.33 4.79
587 598 4.213482 GGGCAATCATTTATACACGAGGTC 59.787 45.833 0.00 0.00 0.00 3.85
591 690 6.707440 ATTTGGGCAATCATTTATACACGA 57.293 33.333 0.00 0.00 0.00 4.35
607 706 6.541641 TCATATGCACCATTTTTAATTTGGGC 59.458 34.615 0.00 0.34 34.72 5.36
615 717 9.194972 TCCAGTTTATCATATGCACCATTTTTA 57.805 29.630 0.00 0.00 0.00 1.52
623 725 6.441274 CAATGGTCCAGTTTATCATATGCAC 58.559 40.000 0.00 0.00 0.00 4.57
641 743 2.611473 CGACTCTGACTCTTGCAATGGT 60.611 50.000 0.00 1.38 0.00 3.55
655 757 1.852067 CGCCCCAAAAACCGACTCTG 61.852 60.000 0.00 0.00 0.00 3.35
843 988 4.462133 CATTGCTCATCCTCCTCTTGAAT 58.538 43.478 0.00 0.00 0.00 2.57
845 990 2.172082 CCATTGCTCATCCTCCTCTTGA 59.828 50.000 0.00 0.00 0.00 3.02
1261 1464 5.354234 ACAAAAATAATCTCTGCGACGGAAT 59.646 36.000 0.00 0.00 0.00 3.01
1279 1482 2.461695 TGAACTTGGGGAGCACAAAAA 58.538 42.857 0.00 0.00 0.00 1.94
1297 1500 5.806502 CCGCTTTTTCAAATCTGCATTATGA 59.193 36.000 0.00 0.00 0.00 2.15
1301 1504 3.993920 ACCGCTTTTTCAAATCTGCATT 58.006 36.364 0.00 0.00 0.00 3.56
1311 1514 3.122297 CTGCATTTCAACCGCTTTTTCA 58.878 40.909 0.00 0.00 0.00 2.69
1312 1515 3.123050 ACTGCATTTCAACCGCTTTTTC 58.877 40.909 0.00 0.00 0.00 2.29
1320 1523 4.687483 CCAGATTTTGACTGCATTTCAACC 59.313 41.667 9.78 4.25 32.65 3.77
1321 1524 4.151157 GCCAGATTTTGACTGCATTTCAAC 59.849 41.667 9.78 1.25 32.65 3.18
1338 1602 4.164988 AGAGTTATGCAGGTAAAGCCAGAT 59.835 41.667 0.00 0.00 40.61 2.90
1339 1603 3.519510 AGAGTTATGCAGGTAAAGCCAGA 59.480 43.478 0.00 0.00 40.61 3.86
1340 1604 3.878778 AGAGTTATGCAGGTAAAGCCAG 58.121 45.455 0.00 0.00 40.61 4.85
1341 1605 4.009675 CAAGAGTTATGCAGGTAAAGCCA 58.990 43.478 0.00 0.00 40.61 4.75
1343 1607 3.691609 AGCAAGAGTTATGCAGGTAAAGC 59.308 43.478 0.00 0.00 46.22 3.51
1344 1608 4.937620 TCAGCAAGAGTTATGCAGGTAAAG 59.062 41.667 0.00 0.00 46.22 1.85
1390 1682 4.026744 TCACCCAAAGTCCAACATTTCAA 58.973 39.130 0.00 0.00 0.00 2.69
1398 1690 3.386402 GGTTCAAATCACCCAAAGTCCAA 59.614 43.478 0.00 0.00 0.00 3.53
1420 1728 5.356190 CCCATATGCAGGCTCATTATAACTG 59.644 44.000 0.00 0.00 0.00 3.16
1421 1729 5.251468 TCCCATATGCAGGCTCATTATAACT 59.749 40.000 0.00 0.00 0.00 2.24
1422 1730 5.500234 TCCCATATGCAGGCTCATTATAAC 58.500 41.667 0.00 0.00 0.00 1.89
1423 1731 5.777526 TCCCATATGCAGGCTCATTATAA 57.222 39.130 0.00 0.00 0.00 0.98
1424 1732 5.398239 CCATCCCATATGCAGGCTCATTATA 60.398 44.000 0.00 0.00 0.00 0.98
1425 1733 4.533815 CATCCCATATGCAGGCTCATTAT 58.466 43.478 0.00 0.00 0.00 1.28
1426 1734 3.308617 CCATCCCATATGCAGGCTCATTA 60.309 47.826 0.00 0.00 0.00 1.90
1427 1735 2.556782 CCATCCCATATGCAGGCTCATT 60.557 50.000 0.00 0.00 0.00 2.57
1428 1736 1.005569 CCATCCCATATGCAGGCTCAT 59.994 52.381 0.00 5.11 0.00 2.90
1429 1737 0.402887 CCATCCCATATGCAGGCTCA 59.597 55.000 0.00 0.00 0.00 4.26
1430 1738 0.694771 TCCATCCCATATGCAGGCTC 59.305 55.000 0.00 0.00 0.00 4.70
1431 1739 1.379776 ATCCATCCCATATGCAGGCT 58.620 50.000 0.00 0.00 0.00 4.58
1432 1740 2.422519 CCTATCCATCCCATATGCAGGC 60.423 54.545 0.00 0.00 0.00 4.85
1433 1741 3.117745 TCCTATCCATCCCATATGCAGG 58.882 50.000 0.00 0.00 0.00 4.85
1434 1742 4.035814 TCTCCTATCCATCCCATATGCAG 58.964 47.826 0.00 0.00 0.00 4.41
1435 1743 4.078932 TCTCCTATCCATCCCATATGCA 57.921 45.455 0.00 0.00 0.00 3.96
1436 1744 5.104193 ACATTCTCCTATCCATCCCATATGC 60.104 44.000 0.00 0.00 0.00 3.14
1442 1750 4.841422 CATCACATTCTCCTATCCATCCC 58.159 47.826 0.00 0.00 0.00 3.85
1443 1751 4.260170 GCATCACATTCTCCTATCCATCC 58.740 47.826 0.00 0.00 0.00 3.51
1445 1753 4.350225 ACTGCATCACATTCTCCTATCCAT 59.650 41.667 0.00 0.00 0.00 3.41
1446 1754 3.713248 ACTGCATCACATTCTCCTATCCA 59.287 43.478 0.00 0.00 0.00 3.41
1454 1762 4.232188 AGATCCAACTGCATCACATTCT 57.768 40.909 0.00 0.00 0.00 2.40
1464 1772 2.425143 TCCATCCAAGATCCAACTGC 57.575 50.000 0.00 0.00 0.00 4.40
1474 1782 1.880675 GCATGCTCAGATCCATCCAAG 59.119 52.381 11.37 0.00 0.00 3.61
1475 1783 1.213430 TGCATGCTCAGATCCATCCAA 59.787 47.619 20.33 0.00 0.00 3.53
1476 1784 0.841289 TGCATGCTCAGATCCATCCA 59.159 50.000 20.33 0.00 0.00 3.41
1477 1785 1.977056 TTGCATGCTCAGATCCATCC 58.023 50.000 20.33 0.00 0.00 3.51
1478 1786 4.037565 TCATTTTGCATGCTCAGATCCATC 59.962 41.667 20.33 0.00 0.00 3.51
1479 1787 3.958147 TCATTTTGCATGCTCAGATCCAT 59.042 39.130 20.33 0.00 0.00 3.41
1480 1788 3.358118 TCATTTTGCATGCTCAGATCCA 58.642 40.909 20.33 0.00 0.00 3.41
1490 1798 7.425915 CAAAACAAACAGTTCATTTTGCATG 57.574 32.000 16.36 0.00 40.26 4.06
1515 1823 2.556287 GCAAACGGACCTGCGAAG 59.444 61.111 0.00 0.00 0.00 3.79
1524 1832 5.297547 GTGATATCTTAGATGGCAAACGGA 58.702 41.667 4.78 0.00 0.00 4.69
1525 1833 4.452455 GGTGATATCTTAGATGGCAAACGG 59.548 45.833 4.78 0.00 0.00 4.44
1526 1834 4.150627 CGGTGATATCTTAGATGGCAAACG 59.849 45.833 4.78 7.33 0.00 3.60
1543 1851 2.696125 ATGGAAGGGGCCGGTGAT 60.696 61.111 1.90 0.00 0.00 3.06
1606 1914 0.250513 GCTCGGGTTCCTCTGTTGAT 59.749 55.000 0.00 0.00 0.00 2.57
1662 1974 4.583073 GTCTTACCCCAAGAGAAGCAAAAA 59.417 41.667 0.00 0.00 44.02 1.94
1676 1989 4.357918 ACATCAGCATATGTCTTACCCC 57.642 45.455 4.29 0.00 35.08 4.95
1677 1990 5.853936 TGTACATCAGCATATGTCTTACCC 58.146 41.667 4.29 0.00 40.52 3.69
1701 2101 2.939103 CACAGCATGCTAACCTTCCTAC 59.061 50.000 22.19 0.00 42.53 3.18
1745 2145 9.122779 AGAGGCTATAATAAGACATACGGATAC 57.877 37.037 0.00 0.00 0.00 2.24
1779 2179 6.049790 GGATTTTCCTAGCGAATCAGTAACT 58.950 40.000 10.92 0.00 32.53 2.24
2016 2422 7.067251 TGCTGAATATAGAAATTGCATCACACA 59.933 33.333 0.00 0.00 0.00 3.72
2039 2445 0.463204 CCATGTCGACTCCAGATGCT 59.537 55.000 17.92 0.00 0.00 3.79
2064 2470 7.866729 TGCTAAATCGACAGTTCAACAAATAA 58.133 30.769 0.00 0.00 0.00 1.40
2069 2475 4.627058 TCTGCTAAATCGACAGTTCAACA 58.373 39.130 0.00 0.00 33.12 3.33
2070 2476 5.554636 CATCTGCTAAATCGACAGTTCAAC 58.445 41.667 0.00 0.00 33.12 3.18
2071 2477 4.093408 GCATCTGCTAAATCGACAGTTCAA 59.907 41.667 0.00 0.00 38.21 2.69
2072 2478 3.618594 GCATCTGCTAAATCGACAGTTCA 59.381 43.478 0.00 0.00 38.21 3.18
2073 2479 3.001736 GGCATCTGCTAAATCGACAGTTC 59.998 47.826 1.70 0.00 41.70 3.01
2074 2480 2.939103 GGCATCTGCTAAATCGACAGTT 59.061 45.455 1.70 0.00 41.70 3.16
2075 2481 2.555199 GGCATCTGCTAAATCGACAGT 58.445 47.619 1.70 0.00 41.70 3.55
2076 2482 1.524355 CGGCATCTGCTAAATCGACAG 59.476 52.381 1.70 0.00 41.70 3.51
2108 2514 8.663911 GCATATATAAGTTCTTCATCTGCCTTC 58.336 37.037 0.00 0.00 0.00 3.46
2195 2601 8.324191 TCCTAAAGACAGATATGTTCCTGAAT 57.676 34.615 0.00 0.00 34.65 2.57
2266 2672 4.380841 TCATACTTTACAGGCTGGTACG 57.619 45.455 20.34 3.98 0.00 3.67
2273 2679 3.939592 GAGTGGGTTCATACTTTACAGGC 59.060 47.826 0.00 0.00 0.00 4.85
2287 2693 1.282157 GGGCAGTTAGATGAGTGGGTT 59.718 52.381 0.00 0.00 0.00 4.11
2290 2696 1.556911 ACTGGGCAGTTAGATGAGTGG 59.443 52.381 0.00 0.00 38.83 4.00
2305 2711 6.357367 AGAAAGTTGCCTACATATAACTGGG 58.643 40.000 0.00 0.00 33.95 4.45
2465 2872 5.486735 AAATTGGTTTTGCTCCATCATGA 57.513 34.783 0.00 0.00 34.75 3.07
2483 2890 6.294731 CCTTCAACTCCGGAGAATGAAAAATT 60.295 38.462 34.86 19.76 30.37 1.82
2543 2950 4.401519 ACAAAATTCTGATCTGCCTCCATG 59.598 41.667 0.00 0.00 0.00 3.66
2753 3160 1.180456 CCCAGTCATGGCAAGCAACA 61.180 55.000 0.00 0.00 46.19 3.33
2781 3188 5.954296 AGATAAATATGCAGGCATGTGAC 57.046 39.130 16.61 4.04 37.82 3.67
2784 3191 6.964807 TCAAAGATAAATATGCAGGCATGT 57.035 33.333 16.61 7.36 37.82 3.21
2788 3195 7.012704 TGACTCTTCAAAGATAAATATGCAGGC 59.987 37.037 0.00 0.00 33.93 4.85
2807 5547 9.706691 TCGTCTGATTTTATTTAAGTGACTCTT 57.293 29.630 0.00 0.00 39.89 2.85
2808 5548 9.141400 GTCGTCTGATTTTATTTAAGTGACTCT 57.859 33.333 0.00 0.00 0.00 3.24
2809 5549 9.141400 AGTCGTCTGATTTTATTTAAGTGACTC 57.859 33.333 0.00 0.00 0.00 3.36
2811 5551 8.709646 ACAGTCGTCTGATTTTATTTAAGTGAC 58.290 33.333 16.64 0.00 43.76 3.67
2812 5552 8.827177 ACAGTCGTCTGATTTTATTTAAGTGA 57.173 30.769 16.64 0.00 43.76 3.41
2825 5565 9.871238 ACTTGTAATTATAAACAGTCGTCTGAT 57.129 29.630 16.64 1.22 43.76 2.90
2826 5566 9.135843 CACTTGTAATTATAAACAGTCGTCTGA 57.864 33.333 16.64 0.00 43.76 3.27
2828 5568 9.701098 TTCACTTGTAATTATAAACAGTCGTCT 57.299 29.630 0.00 0.00 0.00 4.18
2901 5910 4.655440 TTCGTCATGTAATTTGGTCGTG 57.345 40.909 0.00 0.00 0.00 4.35
2955 5964 0.907486 CCCCTTCTGAGACATCTGCA 59.093 55.000 0.00 0.00 0.00 4.41
3066 6075 2.214376 AGGCCAGGATAGATCTCTCG 57.786 55.000 5.01 0.00 0.00 4.04
3339 6348 2.729491 CAGTCAAGCGCGTCGTCA 60.729 61.111 8.43 0.00 0.00 4.35
3555 6564 0.674895 GCTCTACTTGGTGCACCTGG 60.675 60.000 34.75 27.17 36.82 4.45
3579 6593 6.488683 GGAAGATGACTATAGTGCTCTACTGT 59.511 42.308 10.90 0.35 40.65 3.55
3584 6598 4.586841 GGTGGAAGATGACTATAGTGCTCT 59.413 45.833 10.90 8.88 0.00 4.09
3585 6599 4.586841 AGGTGGAAGATGACTATAGTGCTC 59.413 45.833 10.90 6.65 0.00 4.26
3616 6638 5.220710 TGCTTTCTTCAGACTAAAGAGCT 57.779 39.130 7.57 0.00 34.42 4.09
3618 6640 6.226787 TCCTTGCTTTCTTCAGACTAAAGAG 58.773 40.000 7.57 0.00 34.42 2.85
3622 6644 4.348168 ACCTCCTTGCTTTCTTCAGACTAA 59.652 41.667 0.00 0.00 0.00 2.24
3633 6655 3.074538 AGGTTACATCACCTCCTTGCTTT 59.925 43.478 0.00 0.00 44.63 3.51
3693 7361 3.650070 TGCAAGGCAGAGTATAGATCG 57.350 47.619 0.00 0.00 33.32 3.69
3696 7364 5.420725 TTCTTTGCAAGGCAGAGTATAGA 57.579 39.130 3.19 0.00 40.85 1.98
3701 7369 3.181472 CCTTTTTCTTTGCAAGGCAGAGT 60.181 43.478 3.19 0.00 40.85 3.24
3787 7455 6.567050 TGTTAGTTGGTTCGACCTATACATC 58.433 40.000 5.77 0.00 39.58 3.06
3788 7456 6.379133 TCTGTTAGTTGGTTCGACCTATACAT 59.621 38.462 5.77 0.00 39.58 2.29
3789 7457 5.711506 TCTGTTAGTTGGTTCGACCTATACA 59.288 40.000 5.77 0.00 39.58 2.29
3790 7458 6.199937 TCTGTTAGTTGGTTCGACCTATAC 57.800 41.667 5.77 0.00 39.58 1.47
3791 7459 6.839124 TTCTGTTAGTTGGTTCGACCTATA 57.161 37.500 5.77 0.00 39.58 1.31
3792 7460 5.733620 TTCTGTTAGTTGGTTCGACCTAT 57.266 39.130 5.77 0.00 39.58 2.57
3793 7461 5.163426 TGTTTCTGTTAGTTGGTTCGACCTA 60.163 40.000 5.77 0.00 39.58 3.08
3794 7462 4.124970 GTTTCTGTTAGTTGGTTCGACCT 58.875 43.478 5.77 0.00 39.58 3.85
3795 7463 3.872771 TGTTTCTGTTAGTTGGTTCGACC 59.127 43.478 0.00 0.00 39.22 4.79
3796 7464 5.668558 ATGTTTCTGTTAGTTGGTTCGAC 57.331 39.130 0.00 0.00 0.00 4.20
3797 7465 8.928733 GTTATATGTTTCTGTTAGTTGGTTCGA 58.071 33.333 0.00 0.00 0.00 3.71
3798 7466 8.932791 AGTTATATGTTTCTGTTAGTTGGTTCG 58.067 33.333 0.00 0.00 0.00 3.95
3833 7501 8.355169 GCACATGTCAATAATCAGGTCAATAAT 58.645 33.333 0.00 0.00 0.00 1.28
3834 7502 7.338957 TGCACATGTCAATAATCAGGTCAATAA 59.661 33.333 0.00 0.00 0.00 1.40
3835 7503 6.827762 TGCACATGTCAATAATCAGGTCAATA 59.172 34.615 0.00 0.00 0.00 1.90
3836 7504 5.653330 TGCACATGTCAATAATCAGGTCAAT 59.347 36.000 0.00 0.00 0.00 2.57
3837 7505 5.008980 TGCACATGTCAATAATCAGGTCAA 58.991 37.500 0.00 0.00 0.00 3.18
3838 7506 4.587891 TGCACATGTCAATAATCAGGTCA 58.412 39.130 0.00 0.00 0.00 4.02
3839 7507 5.506815 CCATGCACATGTCAATAATCAGGTC 60.507 44.000 9.63 0.00 37.11 3.85
3840 7508 4.340097 CCATGCACATGTCAATAATCAGGT 59.660 41.667 9.63 0.00 37.11 4.00
3841 7509 4.261867 CCCATGCACATGTCAATAATCAGG 60.262 45.833 9.63 0.00 37.11 3.86
3842 7510 4.340097 ACCCATGCACATGTCAATAATCAG 59.660 41.667 9.63 0.00 37.11 2.90
3843 7511 4.279982 ACCCATGCACATGTCAATAATCA 58.720 39.130 9.63 0.00 37.11 2.57
3844 7512 4.555313 CGACCCATGCACATGTCAATAATC 60.555 45.833 9.63 0.00 37.11 1.75
3845 7513 3.316029 CGACCCATGCACATGTCAATAAT 59.684 43.478 9.63 0.00 37.11 1.28
3846 7514 2.682352 CGACCCATGCACATGTCAATAA 59.318 45.455 9.63 0.00 37.11 1.40
3847 7515 2.093235 TCGACCCATGCACATGTCAATA 60.093 45.455 9.63 0.00 37.11 1.90
3848 7516 1.097232 CGACCCATGCACATGTCAAT 58.903 50.000 9.63 0.00 37.11 2.57
3849 7517 0.036022 TCGACCCATGCACATGTCAA 59.964 50.000 9.63 0.00 37.11 3.18
3850 7518 0.036022 TTCGACCCATGCACATGTCA 59.964 50.000 9.63 0.00 37.11 3.58
3851 7519 1.331756 GATTCGACCCATGCACATGTC 59.668 52.381 9.63 0.00 37.11 3.06
3852 7520 1.339920 TGATTCGACCCATGCACATGT 60.340 47.619 9.63 0.00 37.11 3.21
3853 7521 1.381522 TGATTCGACCCATGCACATG 58.618 50.000 3.56 3.56 38.51 3.21
3854 7522 1.745087 GTTGATTCGACCCATGCACAT 59.255 47.619 0.00 0.00 0.00 3.21
3855 7523 1.164411 GTTGATTCGACCCATGCACA 58.836 50.000 0.00 0.00 0.00 4.57
3856 7524 1.453155 AGTTGATTCGACCCATGCAC 58.547 50.000 0.15 0.00 0.00 4.57
3857 7525 3.006940 GTTAGTTGATTCGACCCATGCA 58.993 45.455 0.15 0.00 0.00 3.96
3858 7526 3.006940 TGTTAGTTGATTCGACCCATGC 58.993 45.455 0.15 0.00 0.00 4.06
3899 7567 4.645588 CGACCTTAGGTTCAGGATCTTACT 59.354 45.833 4.99 0.00 35.25 2.24
3900 7568 4.401837 ACGACCTTAGGTTCAGGATCTTAC 59.598 45.833 4.99 0.00 35.25 2.34
3903 7571 3.103080 ACGACCTTAGGTTCAGGATCT 57.897 47.619 4.99 0.00 35.25 2.75
3904 7572 4.401837 AGTTACGACCTTAGGTTCAGGATC 59.598 45.833 4.99 0.00 35.25 3.36
3905 7573 4.159879 CAGTTACGACCTTAGGTTCAGGAT 59.840 45.833 4.99 0.00 35.25 3.24
3907 7575 3.846360 CAGTTACGACCTTAGGTTCAGG 58.154 50.000 4.99 0.00 35.25 3.86
3908 7576 3.251571 GCAGTTACGACCTTAGGTTCAG 58.748 50.000 4.99 3.14 35.25 3.02
3910 7578 3.308438 TGCAGTTACGACCTTAGGTTC 57.692 47.619 4.99 0.00 35.25 3.62
3911 7579 3.070590 ACTTGCAGTTACGACCTTAGGTT 59.929 43.478 4.99 0.00 35.25 3.50
3912 7580 2.631545 ACTTGCAGTTACGACCTTAGGT 59.368 45.455 2.34 2.34 39.44 3.08
3913 7581 2.993899 CACTTGCAGTTACGACCTTAGG 59.006 50.000 0.00 0.00 0.00 2.69
3914 7582 3.909430 TCACTTGCAGTTACGACCTTAG 58.091 45.455 0.00 0.00 0.00 2.18
3917 7585 3.244078 TGAATCACTTGCAGTTACGACCT 60.244 43.478 0.00 0.00 0.00 3.85
3919 7587 4.627467 AGATGAATCACTTGCAGTTACGAC 59.373 41.667 0.00 0.00 0.00 4.34
3921 7589 5.233050 CCTAGATGAATCACTTGCAGTTACG 59.767 44.000 0.00 0.00 0.00 3.18
3922 7590 6.036517 CACCTAGATGAATCACTTGCAGTTAC 59.963 42.308 0.00 0.00 0.00 2.50
3924 7592 4.940046 CACCTAGATGAATCACTTGCAGTT 59.060 41.667 0.00 0.00 0.00 3.16
3925 7593 4.223700 TCACCTAGATGAATCACTTGCAGT 59.776 41.667 0.00 0.00 0.00 4.40
3926 7594 4.763073 TCACCTAGATGAATCACTTGCAG 58.237 43.478 0.00 0.00 0.00 4.41
3928 7596 5.423015 TCTTCACCTAGATGAATCACTTGC 58.577 41.667 0.00 0.00 37.93 4.01
3939 7847 9.487442 AGTAAAAAGAGAGATCTTCACCTAGAT 57.513 33.333 0.00 0.00 37.58 1.98
3958 7866 7.719633 AGTGGATCTTACTGCTTCAAGTAAAAA 59.280 33.333 2.96 0.00 41.03 1.94
4011 7922 2.872858 GGCGACCTTAGGCTCATTTTAG 59.127 50.000 0.00 0.00 0.00 1.85
4016 7927 1.413077 GTTAGGCGACCTTAGGCTCAT 59.587 52.381 0.00 0.00 43.71 2.90
4019 7930 0.616679 TGGTTAGGCGACCTTAGGCT 60.617 55.000 13.07 0.00 46.54 4.58
4028 7939 5.652014 AGATGATCAAATTTTGGTTAGGCGA 59.348 36.000 9.18 0.00 0.00 5.54
4048 7959 5.633830 ACTGGTTAGCACAAATGAAGATG 57.366 39.130 0.00 0.00 0.00 2.90
4105 8237 2.236893 TGAACCATGCTGTGCTCAGATA 59.763 45.455 19.61 7.69 43.76 1.98
4120 8252 6.414732 CATTTATACCTCTGTTCCTGAACCA 58.585 40.000 7.51 0.00 40.46 3.67
4136 8268 9.305925 CTCCAATCAAAAGAAAGGCATTTATAC 57.694 33.333 0.00 0.00 0.00 1.47
4143 8275 5.327732 AGATCTCCAATCAAAAGAAAGGCA 58.672 37.500 0.00 0.00 0.00 4.75
4144 8276 5.911378 AGATCTCCAATCAAAAGAAAGGC 57.089 39.130 0.00 0.00 0.00 4.35
4187 8323 5.525012 TGATAAAGCATGCATCTACACTGTC 59.475 40.000 21.98 0.12 0.00 3.51
4193 8329 6.973843 TCCAAATGATAAAGCATGCATCTAC 58.026 36.000 21.98 8.74 0.00 2.59
4194 8330 7.770366 ATCCAAATGATAAAGCATGCATCTA 57.230 32.000 21.98 8.15 0.00 1.98
4196 8332 7.724305 AAATCCAAATGATAAAGCATGCATC 57.276 32.000 21.98 14.61 31.83 3.91
4197 8333 7.990886 AGAAAATCCAAATGATAAAGCATGCAT 59.009 29.630 21.98 4.57 31.83 3.96
4198 8334 7.332557 AGAAAATCCAAATGATAAAGCATGCA 58.667 30.769 21.98 0.00 31.83 3.96
4201 8337 9.538508 GCTAAGAAAATCCAAATGATAAAGCAT 57.461 29.630 0.00 0.00 31.83 3.79
4203 8339 8.200120 AGGCTAAGAAAATCCAAATGATAAAGC 58.800 33.333 0.00 0.00 31.83 3.51
4204 8340 9.741647 GAGGCTAAGAAAATCCAAATGATAAAG 57.258 33.333 0.00 0.00 31.83 1.85
4208 8344 5.600069 GGGAGGCTAAGAAAATCCAAATGAT 59.400 40.000 0.00 0.00 34.22 2.45
4210 8346 4.711355 TGGGAGGCTAAGAAAATCCAAATG 59.289 41.667 0.00 0.00 0.00 2.32
4222 8358 5.474876 GGAACATATCAAATGGGAGGCTAAG 59.525 44.000 0.00 0.00 0.00 2.18
4246 8410 6.805713 ACTCCCACAAACAAAAGAAACTATG 58.194 36.000 0.00 0.00 0.00 2.23
4295 8459 9.979578 ATTTTAGTATTGTTTGCAAATGACAGA 57.020 25.926 16.21 1.71 38.21 3.41
4366 8530 2.041620 GGGAGGCTAATGGAATATGCCA 59.958 50.000 4.40 4.40 44.14 4.92
4367 8531 2.310052 AGGGAGGCTAATGGAATATGCC 59.690 50.000 0.00 0.00 42.70 4.40
4369 8533 4.647564 ACAGGGAGGCTAATGGAATATG 57.352 45.455 0.00 0.00 0.00 1.78
4370 8534 4.665009 TCAACAGGGAGGCTAATGGAATAT 59.335 41.667 0.00 0.00 0.00 1.28
4371 8535 4.044308 TCAACAGGGAGGCTAATGGAATA 58.956 43.478 0.00 0.00 0.00 1.75
4372 8536 2.852449 TCAACAGGGAGGCTAATGGAAT 59.148 45.455 0.00 0.00 0.00 3.01
4373 8537 2.274542 TCAACAGGGAGGCTAATGGAA 58.725 47.619 0.00 0.00 0.00 3.53
4374 8538 1.965414 TCAACAGGGAGGCTAATGGA 58.035 50.000 0.00 0.00 0.00 3.41
4375 8539 4.202503 ACATATCAACAGGGAGGCTAATGG 60.203 45.833 0.00 0.00 0.00 3.16
4376 8540 4.978099 ACATATCAACAGGGAGGCTAATG 58.022 43.478 0.00 0.00 0.00 1.90
4377 8541 4.042187 GGACATATCAACAGGGAGGCTAAT 59.958 45.833 0.00 0.00 0.00 1.73
4378 8542 3.391296 GGACATATCAACAGGGAGGCTAA 59.609 47.826 0.00 0.00 0.00 3.09
4379 8543 2.972713 GGACATATCAACAGGGAGGCTA 59.027 50.000 0.00 0.00 0.00 3.93
4380 8544 1.771255 GGACATATCAACAGGGAGGCT 59.229 52.381 0.00 0.00 0.00 4.58
4381 8545 1.771255 AGGACATATCAACAGGGAGGC 59.229 52.381 0.00 0.00 0.00 4.70
4382 8546 2.105477 CCAGGACATATCAACAGGGAGG 59.895 54.545 0.00 0.00 0.00 4.30
4383 8547 2.105477 CCCAGGACATATCAACAGGGAG 59.895 54.545 0.00 0.00 37.22 4.30
4384 8548 2.126882 CCCAGGACATATCAACAGGGA 58.873 52.381 0.00 0.00 37.22 4.20
4385 8549 1.846439 ACCCAGGACATATCAACAGGG 59.154 52.381 0.00 0.00 40.88 4.45
4386 8550 3.200825 AGAACCCAGGACATATCAACAGG 59.799 47.826 0.00 0.00 0.00 4.00
4387 8551 4.494091 AGAACCCAGGACATATCAACAG 57.506 45.455 0.00 0.00 0.00 3.16
4388 8552 4.042809 ACAAGAACCCAGGACATATCAACA 59.957 41.667 0.00 0.00 0.00 3.33
4389 8553 4.589908 ACAAGAACCCAGGACATATCAAC 58.410 43.478 0.00 0.00 0.00 3.18
4390 8554 4.927267 ACAAGAACCCAGGACATATCAA 57.073 40.909 0.00 0.00 0.00 2.57
4391 8555 7.872061 ATATACAAGAACCCAGGACATATCA 57.128 36.000 0.00 0.00 0.00 2.15
4392 8556 7.824779 GGAATATACAAGAACCCAGGACATATC 59.175 40.741 0.00 0.00 0.00 1.63
4393 8557 7.257053 GGGAATATACAAGAACCCAGGACATAT 60.257 40.741 0.00 0.00 37.50 1.78
4394 8558 6.043938 GGGAATATACAAGAACCCAGGACATA 59.956 42.308 0.00 0.00 37.50 2.29
4395 8559 5.163088 GGGAATATACAAGAACCCAGGACAT 60.163 44.000 0.00 0.00 37.50 3.06
4396 8560 4.165372 GGGAATATACAAGAACCCAGGACA 59.835 45.833 0.00 0.00 37.50 4.02
4397 8561 4.412528 AGGGAATATACAAGAACCCAGGAC 59.587 45.833 0.00 0.00 39.73 3.85
4398 8562 4.641868 AGGGAATATACAAGAACCCAGGA 58.358 43.478 0.00 0.00 39.73 3.86
4399 8563 4.412199 TGAGGGAATATACAAGAACCCAGG 59.588 45.833 0.00 0.00 39.73 4.45
4400 8564 5.630415 TGAGGGAATATACAAGAACCCAG 57.370 43.478 0.00 0.00 39.73 4.45
4401 8565 5.251932 TGTTGAGGGAATATACAAGAACCCA 59.748 40.000 0.00 0.00 39.73 4.51
4402 8566 5.751586 TGTTGAGGGAATATACAAGAACCC 58.248 41.667 0.00 0.00 37.79 4.11
4403 8567 7.881775 AATGTTGAGGGAATATACAAGAACC 57.118 36.000 0.00 0.00 0.00 3.62
4406 8570 9.066892 GCATAAATGTTGAGGGAATATACAAGA 57.933 33.333 0.00 0.00 0.00 3.02
4407 8571 8.017373 CGCATAAATGTTGAGGGAATATACAAG 58.983 37.037 0.00 0.00 0.00 3.16
4408 8572 7.717436 TCGCATAAATGTTGAGGGAATATACAA 59.283 33.333 0.00 0.00 0.00 2.41
4409 8573 7.172532 GTCGCATAAATGTTGAGGGAATATACA 59.827 37.037 0.00 0.00 0.00 2.29
4410 8574 7.360946 GGTCGCATAAATGTTGAGGGAATATAC 60.361 40.741 0.00 0.00 0.00 1.47
4411 8575 6.653320 GGTCGCATAAATGTTGAGGGAATATA 59.347 38.462 0.00 0.00 0.00 0.86
4412 8576 5.473504 GGTCGCATAAATGTTGAGGGAATAT 59.526 40.000 0.00 0.00 0.00 1.28
4413 8577 4.819630 GGTCGCATAAATGTTGAGGGAATA 59.180 41.667 0.00 0.00 0.00 1.75
4414 8578 3.632145 GGTCGCATAAATGTTGAGGGAAT 59.368 43.478 0.00 0.00 0.00 3.01
4415 8579 3.013921 GGTCGCATAAATGTTGAGGGAA 58.986 45.455 0.00 0.00 0.00 3.97
4416 8580 2.238646 AGGTCGCATAAATGTTGAGGGA 59.761 45.455 0.00 0.00 0.00 4.20
4417 8581 2.614057 GAGGTCGCATAAATGTTGAGGG 59.386 50.000 0.00 0.00 0.00 4.30
4418 8582 3.270027 TGAGGTCGCATAAATGTTGAGG 58.730 45.455 0.00 0.00 0.00 3.86
4419 8583 4.944962 TTGAGGTCGCATAAATGTTGAG 57.055 40.909 0.00 0.00 0.00 3.02
4420 8584 4.517075 TGTTTGAGGTCGCATAAATGTTGA 59.483 37.500 0.00 0.00 0.00 3.18
4421 8585 4.793071 TGTTTGAGGTCGCATAAATGTTG 58.207 39.130 0.00 0.00 0.00 3.33
4422 8586 5.446143 TTGTTTGAGGTCGCATAAATGTT 57.554 34.783 0.00 0.00 0.00 2.71
4423 8587 5.643379 ATTGTTTGAGGTCGCATAAATGT 57.357 34.783 0.00 0.00 0.00 2.71
4424 8588 6.785191 AGTATTGTTTGAGGTCGCATAAATG 58.215 36.000 0.00 0.00 0.00 2.32
4425 8589 8.677148 ATAGTATTGTTTGAGGTCGCATAAAT 57.323 30.769 0.00 0.00 0.00 1.40
4426 8590 9.602568 TTATAGTATTGTTTGAGGTCGCATAAA 57.397 29.630 0.00 0.00 0.00 1.40
4427 8591 9.602568 TTTATAGTATTGTTTGAGGTCGCATAA 57.397 29.630 0.00 0.00 0.00 1.90
4428 8592 9.772973 ATTTATAGTATTGTTTGAGGTCGCATA 57.227 29.630 0.00 0.00 0.00 3.14
4429 8593 8.677148 ATTTATAGTATTGTTTGAGGTCGCAT 57.323 30.769 0.00 0.00 0.00 4.73
4430 8594 8.500753 AATTTATAGTATTGTTTGAGGTCGCA 57.499 30.769 0.00 0.00 0.00 5.10
4431 8595 8.609176 TGAATTTATAGTATTGTTTGAGGTCGC 58.391 33.333 0.00 0.00 0.00 5.19
4451 8615 8.977267 AGTACGTATAGTCTCCTACTGAATTT 57.023 34.615 0.00 0.00 39.39 1.82
4452 8616 9.487790 GTAGTACGTATAGTCTCCTACTGAATT 57.512 37.037 0.00 0.00 39.39 2.17
4453 8617 8.646004 TGTAGTACGTATAGTCTCCTACTGAAT 58.354 37.037 14.57 0.00 39.39 2.57
4454 8618 8.011844 TGTAGTACGTATAGTCTCCTACTGAA 57.988 38.462 14.57 0.00 39.39 3.02
4455 8619 7.588497 TGTAGTACGTATAGTCTCCTACTGA 57.412 40.000 14.57 0.00 39.39 3.41
4456 8620 8.830201 ATTGTAGTACGTATAGTCTCCTACTG 57.170 38.462 14.57 0.00 39.39 2.74
4457 8621 9.487790 GAATTGTAGTACGTATAGTCTCCTACT 57.512 37.037 14.57 3.09 42.62 2.57
4458 8622 9.265901 TGAATTGTAGTACGTATAGTCTCCTAC 57.734 37.037 0.00 4.55 33.20 3.18
4460 8624 8.921353 ATGAATTGTAGTACGTATAGTCTCCT 57.079 34.615 0.00 0.00 0.00 3.69
4461 8625 9.609950 GAATGAATTGTAGTACGTATAGTCTCC 57.390 37.037 0.00 0.00 0.00 3.71
4464 8628 9.947669 ACTGAATGAATTGTAGTACGTATAGTC 57.052 33.333 0.00 0.00 0.00 2.59
4469 8633 9.946165 CAGATACTGAATGAATTGTAGTACGTA 57.054 33.333 0.00 0.00 32.44 3.57
4470 8634 8.683615 TCAGATACTGAATGAATTGTAGTACGT 58.316 33.333 0.00 0.00 37.57 3.57
4471 8635 9.684448 ATCAGATACTGAATGAATTGTAGTACG 57.316 33.333 5.57 0.00 44.04 3.67
4503 8667 9.574516 TCTGTTCTACTGAATGAGCATATAGTA 57.425 33.333 0.00 0.00 34.40 1.82
4504 8668 8.470657 TCTGTTCTACTGAATGAGCATATAGT 57.529 34.615 0.00 0.00 34.40 2.12
4507 8671 9.872721 CATATCTGTTCTACTGAATGAGCATAT 57.127 33.333 0.00 0.00 34.40 1.78
4508 8672 8.309656 CCATATCTGTTCTACTGAATGAGCATA 58.690 37.037 0.00 0.00 34.40 3.14
4509 8673 7.015974 TCCATATCTGTTCTACTGAATGAGCAT 59.984 37.037 0.00 0.00 34.40 3.79
4510 8674 6.324770 TCCATATCTGTTCTACTGAATGAGCA 59.675 38.462 0.00 0.00 34.40 4.26
4511 8675 6.753180 TCCATATCTGTTCTACTGAATGAGC 58.247 40.000 0.00 0.00 34.40 4.26
4512 8676 8.637099 TCTTCCATATCTGTTCTACTGAATGAG 58.363 37.037 0.00 0.00 34.40 2.90
4513 8677 8.539117 TCTTCCATATCTGTTCTACTGAATGA 57.461 34.615 0.00 0.00 34.40 2.57
4514 8678 9.605275 TTTCTTCCATATCTGTTCTACTGAATG 57.395 33.333 0.00 0.00 34.40 2.67
4515 8679 9.829507 CTTTCTTCCATATCTGTTCTACTGAAT 57.170 33.333 0.00 0.00 34.40 2.57
4516 8680 9.035890 TCTTTCTTCCATATCTGTTCTACTGAA 57.964 33.333 0.00 0.00 29.93 3.02
4517 8681 8.595362 TCTTTCTTCCATATCTGTTCTACTGA 57.405 34.615 0.00 0.00 0.00 3.41
4532 8696 9.565090 CCATTGTTATCAGATATCTTTCTTCCA 57.435 33.333 1.33 0.00 0.00 3.53
4533 8697 9.566432 ACCATTGTTATCAGATATCTTTCTTCC 57.434 33.333 1.33 0.00 0.00 3.46
4539 8703 9.699410 TCCAAAACCATTGTTATCAGATATCTT 57.301 29.630 1.33 0.00 33.30 2.40
4540 8704 9.699410 TTCCAAAACCATTGTTATCAGATATCT 57.301 29.630 0.00 0.00 33.30 1.98
4541 8705 9.736023 GTTCCAAAACCATTGTTATCAGATATC 57.264 33.333 0.00 0.00 33.30 1.63
4542 8706 9.479549 AGTTCCAAAACCATTGTTATCAGATAT 57.520 29.630 0.00 0.00 35.92 1.63
4543 8707 8.739039 CAGTTCCAAAACCATTGTTATCAGATA 58.261 33.333 0.00 0.00 35.92 1.98
4544 8708 7.233348 ACAGTTCCAAAACCATTGTTATCAGAT 59.767 33.333 0.00 0.00 35.92 2.90
4545 8709 6.549364 ACAGTTCCAAAACCATTGTTATCAGA 59.451 34.615 0.00 0.00 35.92 3.27
4546 8710 6.748132 ACAGTTCCAAAACCATTGTTATCAG 58.252 36.000 0.00 0.00 35.92 2.90
4547 8711 6.723298 ACAGTTCCAAAACCATTGTTATCA 57.277 33.333 0.00 0.00 35.92 2.15
4548 8712 7.593644 GTGTACAGTTCCAAAACCATTGTTATC 59.406 37.037 0.00 0.00 35.92 1.75
4549 8713 7.286775 AGTGTACAGTTCCAAAACCATTGTTAT 59.713 33.333 0.00 0.00 35.92 1.89
4550 8714 6.603997 AGTGTACAGTTCCAAAACCATTGTTA 59.396 34.615 0.00 0.00 35.92 2.41
4551 8715 5.420739 AGTGTACAGTTCCAAAACCATTGTT 59.579 36.000 0.00 0.00 35.92 2.83
4552 8716 4.953579 AGTGTACAGTTCCAAAACCATTGT 59.046 37.500 0.00 0.00 35.92 2.71
4553 8717 5.514274 AGTGTACAGTTCCAAAACCATTG 57.486 39.130 0.00 0.00 35.92 2.82
4554 8718 6.208599 CCATAGTGTACAGTTCCAAAACCATT 59.791 38.462 8.85 0.00 35.92 3.16
4555 8719 5.710099 CCATAGTGTACAGTTCCAAAACCAT 59.290 40.000 8.85 0.00 35.92 3.55
4556 8720 5.067273 CCATAGTGTACAGTTCCAAAACCA 58.933 41.667 8.85 0.00 35.92 3.67
4557 8721 5.622770 CCATAGTGTACAGTTCCAAAACC 57.377 43.478 8.85 0.00 35.92 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.