Multiple sequence alignment - TraesCS3D01G008600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G008600 chr3D 100.000 5286 0 0 1 5286 2985447 2980162 0.000000e+00 9762.0
1 TraesCS3D01G008600 chr3D 90.088 1130 90 17 3304 4416 2999643 2998519 0.000000e+00 1447.0
2 TraesCS3D01G008600 chr3D 85.246 854 97 22 3212 4040 3000488 2999639 0.000000e+00 852.0
3 TraesCS3D01G008600 chr3D 85.381 472 59 6 639 1109 3001510 3001048 1.030000e-131 481.0
4 TraesCS3D01G008600 chr3D 85.577 104 14 1 1876 1979 3019709 3019607 2.010000e-19 108.0
5 TraesCS3D01G008600 chr3B 90.442 3306 254 31 1155 4413 2511482 2514772 0.000000e+00 4298.0
6 TraesCS3D01G008600 chr3B 80.690 2377 360 62 2107 4413 2485801 2488148 0.000000e+00 1755.0
7 TraesCS3D01G008600 chr3B 88.829 1110 101 12 635 1739 2489631 2490722 0.000000e+00 1341.0
8 TraesCS3D01G008600 chr3B 84.089 1037 146 14 3357 4375 2492451 2493486 0.000000e+00 983.0
9 TraesCS3D01G008600 chr3B 83.239 1056 137 25 1737 2785 2490843 2491865 0.000000e+00 933.0
10 TraesCS3D01G008600 chr3B 91.734 496 33 5 635 1128 2510996 2511485 0.000000e+00 682.0
11 TraesCS3D01G008600 chr3B 81.654 665 116 6 3719 4379 2476830 2477492 1.000000e-151 547.0
12 TraesCS3D01G008600 chr3B 79.789 475 69 19 1521 1985 2474537 2474994 2.380000e-83 320.0
13 TraesCS3D01G008600 chr3B 90.698 215 14 3 190 402 2510262 2510472 1.120000e-71 281.0
14 TraesCS3D01G008600 chr3B 82.196 337 43 7 4525 4851 2515452 2515781 1.880000e-69 274.0
15 TraesCS3D01G008600 chr3B 91.275 149 13 0 27 175 2489001 2489149 2.500000e-48 204.0
16 TraesCS3D01G008600 chr3B 91.509 106 9 0 1 106 2510129 2510234 4.270000e-31 147.0
17 TraesCS3D01G008600 chr3B 83.803 142 19 4 5018 5158 2515956 2516094 1.190000e-26 132.0
18 TraesCS3D01G008600 chr3B 95.652 46 2 0 1924 1969 2485558 2485603 2.040000e-09 75.0
19 TraesCS3D01G008600 chrUn 86.140 2215 227 37 635 2811 32091241 32089069 0.000000e+00 2316.0
20 TraesCS3D01G008600 chrUn 88.358 962 91 16 3472 4416 32132998 32132041 0.000000e+00 1136.0
21 TraesCS3D01G008600 chrUn 79.905 632 119 6 2153 2780 32134353 32133726 1.740000e-124 457.0
22 TraesCS3D01G008600 chrUn 78.625 669 128 11 2119 2776 308942119 308942783 3.780000e-116 429.0
23 TraesCS3D01G008600 chrUn 79.785 465 66 18 1521 1972 308941594 308942043 3.970000e-81 313.0
24 TraesCS3D01G008600 chrUn 74.648 639 136 18 2154 2776 1484008 1484636 5.250000e-65 259.0
25 TraesCS3D01G008600 chrUn 90.449 178 10 4 4 175 32096084 32095908 1.480000e-55 228.0
26 TraesCS3D01G008600 chrUn 82.126 207 27 7 639 842 32135421 32135222 9.100000e-38 169.0
27 TraesCS3D01G008600 chrUn 89.474 95 6 1 261 355 32095231 32095141 3.340000e-22 117.0
28 TraesCS3D01G008600 chrUn 90.196 51 4 1 4798 4847 134966502 134966452 1.230000e-06 65.8
29 TraesCS3D01G008600 chr3A 82.353 663 113 4 3719 4378 42335 41674 1.650000e-159 573.0
30 TraesCS3D01G008600 chr3A 82.202 663 114 4 3719 4378 15306 14645 7.680000e-158 568.0
31 TraesCS3D01G008600 chr3A 82.202 663 114 4 3719 4378 65223 64562 7.680000e-158 568.0
32 TraesCS3D01G008600 chr3A 78.625 669 128 11 2119 2776 17099 16435 3.780000e-116 429.0
33 TraesCS3D01G008600 chr3A 78.625 669 128 11 2119 2776 44128 43464 3.780000e-116 429.0
34 TraesCS3D01G008600 chr3A 78.625 669 128 11 2119 2776 67016 66352 3.780000e-116 429.0
35 TraesCS3D01G008600 chr3A 79.785 465 66 18 1521 1972 17624 17175 3.970000e-81 313.0
36 TraesCS3D01G008600 chr3A 79.785 465 66 18 1521 1972 44653 44204 3.970000e-81 313.0
37 TraesCS3D01G008600 chr3A 79.785 465 66 18 1521 1972 67541 67092 3.970000e-81 313.0
38 TraesCS3D01G008600 chr3A 90.000 50 4 1 4803 4851 282006313 282006362 4.420000e-06 63.9
39 TraesCS3D01G008600 chr1D 74.608 638 138 16 2154 2776 473762456 473761828 5.250000e-65 259.0
40 TraesCS3D01G008600 chr1D 78.788 396 74 9 2154 2544 473736858 473736468 1.890000e-64 257.0
41 TraesCS3D01G008600 chr2B 78.571 140 16 8 4735 4860 571877809 571877670 4.390000e-11 80.5
42 TraesCS3D01G008600 chr2B 77.857 140 17 7 4735 4860 571833884 571833745 2.040000e-09 75.0
43 TraesCS3D01G008600 chr2B 77.857 140 17 9 4735 4860 789327009 789326870 2.040000e-09 75.0
44 TraesCS3D01G008600 chr2B 75.714 140 18 11 4735 4860 571964253 571964116 7.400000e-04 56.5
45 TraesCS3D01G008600 chr2B 76.378 127 16 9 4735 4847 571994899 571994773 7.400000e-04 56.5
46 TraesCS3D01G008600 chr7D 80.531 113 11 9 4750 4851 615951527 615951639 5.680000e-10 76.8
47 TraesCS3D01G008600 chr7D 78.704 108 14 7 4751 4849 477388586 477388479 4.420000e-06 63.9
48 TraesCS3D01G008600 chr7D 79.381 97 12 3 4687 4777 440267019 440267113 1.590000e-05 62.1
49 TraesCS3D01G008600 chr5B 91.667 48 2 1 4732 4777 56846170 56846217 1.230000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G008600 chr3D 2980162 2985447 5285 True 9762.000000 9762 100.000000 1 5286 1 chr3D.!!$R1 5285
1 TraesCS3D01G008600 chr3D 2998519 3001510 2991 True 926.666667 1447 86.905000 639 4416 3 chr3D.!!$R3 3777
2 TraesCS3D01G008600 chr3B 2510129 2516094 5965 False 969.000000 4298 88.397000 1 5158 6 chr3B.!!$F3 5157
3 TraesCS3D01G008600 chr3B 2485558 2493486 7928 False 881.833333 1755 87.295667 27 4413 6 chr3B.!!$F2 4386
4 TraesCS3D01G008600 chr3B 2474537 2477492 2955 False 433.500000 547 80.721500 1521 4379 2 chr3B.!!$F1 2858
5 TraesCS3D01G008600 chrUn 32089069 32096084 7015 True 887.000000 2316 88.687667 4 2811 3 chrUn.!!$R2 2807
6 TraesCS3D01G008600 chrUn 32132041 32135421 3380 True 587.333333 1136 83.463000 639 4416 3 chrUn.!!$R3 3777
7 TraesCS3D01G008600 chrUn 308941594 308942783 1189 False 371.000000 429 79.205000 1521 2776 2 chrUn.!!$F2 1255
8 TraesCS3D01G008600 chrUn 1484008 1484636 628 False 259.000000 259 74.648000 2154 2776 1 chrUn.!!$F1 622
9 TraesCS3D01G008600 chr3A 41674 44653 2979 True 438.333333 573 80.254333 1521 4378 3 chr3A.!!$R2 2857
10 TraesCS3D01G008600 chr3A 14645 17624 2979 True 436.666667 568 80.204000 1521 4378 3 chr3A.!!$R1 2857
11 TraesCS3D01G008600 chr3A 64562 67541 2979 True 436.666667 568 80.204000 1521 4378 3 chr3A.!!$R3 2857
12 TraesCS3D01G008600 chr1D 473761828 473762456 628 True 259.000000 259 74.608000 2154 2776 1 chr1D.!!$R2 622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
582 5799 0.037046 TGCACACTCGCATCTCACAT 60.037 50.000 0.0 0.0 36.86 3.21 F
583 5800 0.649475 GCACACTCGCATCTCACATC 59.351 55.000 0.0 0.0 0.00 3.06 F
584 5801 1.738365 GCACACTCGCATCTCACATCT 60.738 52.381 0.0 0.0 0.00 2.90 F
632 5849 2.050077 GCCCGTGCTTTGCTCAAC 60.050 61.111 0.0 0.0 33.53 3.18 F
1593 9354 2.167219 CGTCGCTTCGCACCATGAT 61.167 57.895 0.0 0.0 0.00 2.45 F
3184 11467 1.250328 TCGCCCAATATACGACGGAT 58.750 50.000 0.0 0.0 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2309 10408 0.179234 TGCCTTGAGGTGTTTGTCGA 59.821 50.00 0.00 0.00 37.57 4.20 R
2364 10463 0.249280 CAGTGGACGCACAGTGTGTA 60.249 55.00 23.73 2.51 41.77 2.90 R
2676 10793 1.170290 CCCACGGCGAAATATTCCCC 61.170 60.00 16.62 0.00 0.00 4.81 R
2786 10905 9.845740 GGTATGCTTATTTTTCCCCATTAATTT 57.154 29.63 0.00 0.00 0.00 1.82 R
3440 11767 0.456221 GCGATGGACCTCTCGAAGAA 59.544 55.00 17.71 0.00 37.05 2.52 R
4838 14662 0.035439 TTTTGGCGGGAGGAGACATC 60.035 55.00 0.00 0.00 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 3486 1.454479 CCTCGCTGGCCCATCAATT 60.454 57.895 0.00 0.00 0.00 2.32
70 3488 1.679139 CTCGCTGGCCCATCAATTAA 58.321 50.000 0.00 0.00 0.00 1.40
115 3536 1.785041 GCCAAGTCAACAGAGCGCAA 61.785 55.000 11.47 0.00 0.00 4.85
118 3539 1.070309 CAAGTCAACAGAGCGCAACTC 60.070 52.381 11.47 0.00 46.66 3.01
157 3581 0.179045 GGTGGGATCAGTTCATCCGG 60.179 60.000 0.00 0.00 43.22 5.14
158 3582 0.830648 GTGGGATCAGTTCATCCGGA 59.169 55.000 6.61 6.61 43.22 5.14
159 3583 1.417890 GTGGGATCAGTTCATCCGGAT 59.582 52.381 12.38 12.38 43.22 4.18
160 3584 2.126882 TGGGATCAGTTCATCCGGATT 58.873 47.619 16.19 0.00 43.22 3.01
161 3585 2.509548 TGGGATCAGTTCATCCGGATTT 59.490 45.455 16.19 0.00 43.22 2.17
162 3586 3.714280 TGGGATCAGTTCATCCGGATTTA 59.286 43.478 16.19 2.68 43.22 1.40
163 3587 4.165180 TGGGATCAGTTCATCCGGATTTAA 59.835 41.667 16.19 9.65 43.22 1.52
164 3588 4.757149 GGGATCAGTTCATCCGGATTTAAG 59.243 45.833 16.19 3.30 43.22 1.85
165 3589 5.368989 GGATCAGTTCATCCGGATTTAAGT 58.631 41.667 16.19 12.22 33.13 2.24
166 3590 5.467063 GGATCAGTTCATCCGGATTTAAGTC 59.533 44.000 16.19 7.28 33.13 3.01
167 3591 4.766375 TCAGTTCATCCGGATTTAAGTCC 58.234 43.478 16.19 6.94 34.82 3.85
168 3592 4.469945 TCAGTTCATCCGGATTTAAGTCCT 59.530 41.667 16.19 3.39 36.07 3.85
169 3593 4.572389 CAGTTCATCCGGATTTAAGTCCTG 59.428 45.833 16.19 11.59 36.07 3.86
170 3594 4.469945 AGTTCATCCGGATTTAAGTCCTGA 59.530 41.667 16.19 13.41 36.20 3.86
171 3595 5.045869 AGTTCATCCGGATTTAAGTCCTGAA 60.046 40.000 16.19 10.76 35.53 3.02
172 3596 4.766375 TCATCCGGATTTAAGTCCTGAAC 58.234 43.478 16.19 0.00 35.53 3.18
173 3597 4.469945 TCATCCGGATTTAAGTCCTGAACT 59.530 41.667 16.19 0.00 41.10 3.01
175 3599 5.237236 TCCGGATTTAAGTCCTGAACTTT 57.763 39.130 14.44 0.00 46.26 2.66
176 3600 5.627135 TCCGGATTTAAGTCCTGAACTTTT 58.373 37.500 14.44 0.00 46.26 2.27
177 3601 6.066032 TCCGGATTTAAGTCCTGAACTTTTT 58.934 36.000 14.44 0.00 46.26 1.94
227 3659 4.177165 TGACATAGGTGCTTGCATTTTG 57.823 40.909 0.00 0.00 0.00 2.44
241 3999 7.442364 TGCTTGCATTTTGTAGAGGATATAGAC 59.558 37.037 0.00 0.00 0.00 2.59
297 4353 7.830739 AGCCTATTTCTTACACCATTTTTCTG 58.169 34.615 0.00 0.00 0.00 3.02
302 4358 6.399639 TTCTTACACCATTTTTCTGTTCCC 57.600 37.500 0.00 0.00 0.00 3.97
332 4388 1.673168 GAGCCGAAAGATGGAAGCAT 58.327 50.000 0.00 0.00 0.00 3.79
333 4389 2.803133 CGAGCCGAAAGATGGAAGCATA 60.803 50.000 0.00 0.00 0.00 3.14
334 4390 3.406764 GAGCCGAAAGATGGAAGCATAT 58.593 45.455 0.00 0.00 0.00 1.78
335 4391 3.144506 AGCCGAAAGATGGAAGCATATG 58.855 45.455 0.00 0.00 0.00 1.78
355 4411 4.382345 TGCATGTTGTGTTTCATGTTGA 57.618 36.364 0.00 0.00 42.09 3.18
457 5658 2.668212 GGCTAGCCACGCACACAA 60.668 61.111 29.33 0.00 35.81 3.33
467 5668 2.143122 CACGCACACAAGTTCTACCAT 58.857 47.619 0.00 0.00 0.00 3.55
468 5669 2.548057 CACGCACACAAGTTCTACCATT 59.452 45.455 0.00 0.00 0.00 3.16
469 5670 2.548057 ACGCACACAAGTTCTACCATTG 59.452 45.455 0.00 0.00 0.00 2.82
471 5672 3.146066 GCACACAAGTTCTACCATTGGA 58.854 45.455 10.37 0.00 0.00 3.53
472 5673 3.058224 GCACACAAGTTCTACCATTGGAC 60.058 47.826 10.37 0.00 0.00 4.02
473 5674 4.133820 CACACAAGTTCTACCATTGGACA 58.866 43.478 10.37 0.00 0.00 4.02
474 5675 4.578516 CACACAAGTTCTACCATTGGACAA 59.421 41.667 10.37 0.00 0.00 3.18
475 5676 4.578928 ACACAAGTTCTACCATTGGACAAC 59.421 41.667 10.37 8.61 0.00 3.32
476 5677 4.023193 CACAAGTTCTACCATTGGACAACC 60.023 45.833 10.37 0.00 0.00 3.77
477 5678 3.053831 AGTTCTACCATTGGACAACCG 57.946 47.619 10.37 0.00 39.42 4.44
478 5679 2.370849 AGTTCTACCATTGGACAACCGT 59.629 45.455 10.37 0.00 39.42 4.83
479 5680 3.579586 AGTTCTACCATTGGACAACCGTA 59.420 43.478 10.37 0.00 39.42 4.02
480 5681 3.880047 TCTACCATTGGACAACCGTAG 57.120 47.619 10.37 11.38 39.42 3.51
481 5682 3.167485 TCTACCATTGGACAACCGTAGT 58.833 45.455 10.37 0.00 39.42 2.73
482 5683 2.943036 ACCATTGGACAACCGTAGTT 57.057 45.000 10.37 0.00 39.42 2.24
483 5684 2.774687 ACCATTGGACAACCGTAGTTC 58.225 47.619 10.37 0.00 39.42 3.01
484 5685 2.370849 ACCATTGGACAACCGTAGTTCT 59.629 45.455 10.37 0.00 39.42 3.01
485 5686 3.579586 ACCATTGGACAACCGTAGTTCTA 59.420 43.478 10.37 0.00 39.42 2.10
486 5687 4.224370 ACCATTGGACAACCGTAGTTCTAT 59.776 41.667 10.37 0.00 39.42 1.98
487 5688 5.183228 CCATTGGACAACCGTAGTTCTATT 58.817 41.667 0.00 0.00 39.42 1.73
488 5689 6.070653 ACCATTGGACAACCGTAGTTCTATTA 60.071 38.462 10.37 0.00 39.42 0.98
489 5690 6.257193 CCATTGGACAACCGTAGTTCTATTAC 59.743 42.308 0.00 0.00 39.42 1.89
490 5691 6.594788 TTGGACAACCGTAGTTCTATTACT 57.405 37.500 0.00 0.00 39.42 2.24
491 5692 5.957798 TGGACAACCGTAGTTCTATTACTG 58.042 41.667 0.00 0.00 39.42 2.74
492 5693 5.105635 TGGACAACCGTAGTTCTATTACTGG 60.106 44.000 0.00 0.00 39.42 4.00
493 5694 5.126061 GGACAACCGTAGTTCTATTACTGGA 59.874 44.000 0.00 0.00 32.45 3.86
494 5695 5.958955 ACAACCGTAGTTCTATTACTGGAC 58.041 41.667 0.00 0.00 32.45 4.02
495 5696 5.105595 ACAACCGTAGTTCTATTACTGGACC 60.106 44.000 0.00 0.00 32.45 4.46
496 5697 4.603131 ACCGTAGTTCTATTACTGGACCA 58.397 43.478 0.00 0.00 0.00 4.02
497 5698 4.400567 ACCGTAGTTCTATTACTGGACCAC 59.599 45.833 0.00 0.00 0.00 4.16
498 5699 4.202090 CCGTAGTTCTATTACTGGACCACC 60.202 50.000 0.00 0.00 0.00 4.61
499 5700 4.400251 CGTAGTTCTATTACTGGACCACCA 59.600 45.833 0.00 0.00 44.76 4.17
500 5701 5.068723 CGTAGTTCTATTACTGGACCACCAT 59.931 44.000 0.00 0.00 45.87 3.55
501 5702 6.263842 CGTAGTTCTATTACTGGACCACCATA 59.736 42.308 0.00 0.00 45.87 2.74
502 5703 6.481434 AGTTCTATTACTGGACCACCATAC 57.519 41.667 0.00 0.00 45.87 2.39
503 5704 6.203072 AGTTCTATTACTGGACCACCATACT 58.797 40.000 0.00 0.00 45.87 2.12
504 5705 6.672657 AGTTCTATTACTGGACCACCATACTT 59.327 38.462 0.00 0.00 45.87 2.24
554 5771 3.942748 TGGTACAGTGACAAAAACCTCAC 59.057 43.478 0.00 0.00 37.63 3.51
564 5781 1.238439 AAAACCTCACCAGACGCATG 58.762 50.000 0.00 0.00 0.00 4.06
580 5797 4.266983 TGCACACTCGCATCTCAC 57.733 55.556 0.00 0.00 36.86 3.51
581 5798 1.367102 TGCACACTCGCATCTCACA 59.633 52.632 0.00 0.00 36.86 3.58
582 5799 0.037046 TGCACACTCGCATCTCACAT 60.037 50.000 0.00 0.00 36.86 3.21
583 5800 0.649475 GCACACTCGCATCTCACATC 59.351 55.000 0.00 0.00 0.00 3.06
584 5801 1.738365 GCACACTCGCATCTCACATCT 60.738 52.381 0.00 0.00 0.00 2.90
585 5802 2.480244 GCACACTCGCATCTCACATCTA 60.480 50.000 0.00 0.00 0.00 1.98
586 5803 3.111838 CACACTCGCATCTCACATCTAC 58.888 50.000 0.00 0.00 0.00 2.59
587 5804 2.099921 ACACTCGCATCTCACATCTACC 59.900 50.000 0.00 0.00 0.00 3.18
589 5806 2.961741 ACTCGCATCTCACATCTACCAT 59.038 45.455 0.00 0.00 0.00 3.55
591 5808 3.225940 TCGCATCTCACATCTACCATCT 58.774 45.455 0.00 0.00 0.00 2.90
592 5809 3.254411 TCGCATCTCACATCTACCATCTC 59.746 47.826 0.00 0.00 0.00 2.75
594 5811 4.321824 CGCATCTCACATCTACCATCTCAT 60.322 45.833 0.00 0.00 0.00 2.90
597 5814 6.979817 GCATCTCACATCTACCATCTCATATC 59.020 42.308 0.00 0.00 0.00 1.63
598 5815 7.147863 GCATCTCACATCTACCATCTCATATCT 60.148 40.741 0.00 0.00 0.00 1.98
599 5816 9.406113 CATCTCACATCTACCATCTCATATCTA 57.594 37.037 0.00 0.00 0.00 1.98
622 5839 8.141909 TCTATATATATTTACATGAGCCCGTGC 58.858 37.037 0.00 0.00 32.58 5.34
632 5849 2.050077 GCCCGTGCTTTGCTCAAC 60.050 61.111 0.00 0.00 33.53 3.18
633 5850 2.644992 CCCGTGCTTTGCTCAACC 59.355 61.111 0.00 0.00 0.00 3.77
652 8380 6.806751 TCAACCAGAAATCTAGATAACGGAG 58.193 40.000 5.46 4.13 0.00 4.63
684 8412 6.660949 ACCTTTCAAAGATCCATAACCTTCAG 59.339 38.462 0.00 0.00 0.00 3.02
777 8519 6.068473 TGATGCTCATGCTCATATTTTGTC 57.932 37.500 0.00 0.00 40.48 3.18
778 8520 5.826208 TGATGCTCATGCTCATATTTTGTCT 59.174 36.000 0.00 0.00 40.48 3.41
779 8521 5.494632 TGCTCATGCTCATATTTTGTCTG 57.505 39.130 0.00 0.00 40.48 3.51
787 8529 5.163824 TGCTCATATTTTGTCTGCGAAAGAG 60.164 40.000 0.00 0.00 34.84 2.85
788 8530 5.728898 GCTCATATTTTGTCTGCGAAAGAGG 60.729 44.000 0.00 0.00 34.84 3.69
821 8563 4.873746 TCAGATGAAGAAAAGTCGGACT 57.126 40.909 4.45 4.45 0.00 3.85
828 8570 5.399858 TGAAGAAAAGTCGGACTATTCGAG 58.600 41.667 11.71 0.00 37.31 4.04
832 8574 3.802948 AAGTCGGACTATTCGAGCATT 57.197 42.857 11.71 0.00 37.31 3.56
846 8588 5.734855 TCGAGCATTAATAACTTTCTGCC 57.265 39.130 0.00 0.00 0.00 4.85
935 8677 3.703420 GCACCACGGTGTCTACTATAAG 58.297 50.000 17.26 0.00 46.90 1.73
1276 9031 4.398319 AGACCCACCACTAAATCAACTTG 58.602 43.478 0.00 0.00 0.00 3.16
1434 9192 5.163332 ACCCTCTTCATACGAGGTAATTTCC 60.163 44.000 5.46 0.00 45.29 3.13
1440 9198 7.703621 TCTTCATACGAGGTAATTTCCGTTTAG 59.296 37.037 0.00 0.00 36.58 1.85
1465 9223 7.691158 GTTAATTAATTAACAGTGGCGCTAGT 58.309 34.615 32.13 0.00 46.96 2.57
1486 9247 4.162509 AGTTCCATACAAGCTAACCCTCTC 59.837 45.833 0.00 0.00 0.00 3.20
1487 9248 3.995636 TCCATACAAGCTAACCCTCTCT 58.004 45.455 0.00 0.00 0.00 3.10
1488 9249 3.961408 TCCATACAAGCTAACCCTCTCTC 59.039 47.826 0.00 0.00 0.00 3.20
1490 9251 4.038642 CCATACAAGCTAACCCTCTCTCTC 59.961 50.000 0.00 0.00 0.00 3.20
1593 9354 2.167219 CGTCGCTTCGCACCATGAT 61.167 57.895 0.00 0.00 0.00 2.45
1635 9396 5.367937 TGGAAGCAAGGAAGAATCTATAGCT 59.632 40.000 0.00 0.00 0.00 3.32
1641 9402 6.284459 CAAGGAAGAATCTATAGCTTCGGTT 58.716 40.000 9.98 1.65 39.05 4.44
1729 9490 4.111016 CAGGTCGGCAGCGTCGTA 62.111 66.667 2.79 0.00 30.45 3.43
1757 9641 9.877178 CCATCTAACCTAATTATAAATCTCGCT 57.123 33.333 0.00 0.00 0.00 4.93
1874 9758 2.846193 CGAAGTTGGGACTTTCTTGGA 58.154 47.619 0.00 0.00 45.88 3.53
1892 9776 2.832129 TGGACTCAACTACCAGATGACC 59.168 50.000 0.00 0.00 0.00 4.02
2072 10114 4.207955 AGTAGTCTTGATCGTGATGGCTA 58.792 43.478 0.00 0.00 0.00 3.93
2074 10116 4.250116 AGTCTTGATCGTGATGGCTATC 57.750 45.455 2.55 2.55 0.00 2.08
2581 10698 4.899239 CGCTCTCCATCGGTGGCC 62.899 72.222 10.80 0.00 45.63 5.36
2777 10894 6.458232 AAACAAGCAACAAATAGTGGTACA 57.542 33.333 0.00 0.00 0.00 2.90
2786 10905 7.334921 GCAACAAATAGTGGTACATACCTACAA 59.665 37.037 9.46 0.00 46.58 2.41
2812 10938 9.845740 AAATTAATGGGGAAAAATAAGCATACC 57.154 29.630 0.00 0.00 0.00 2.73
2823 10949 5.435686 AATAAGCATACCACCACAAGAGA 57.564 39.130 0.00 0.00 0.00 3.10
2827 10953 2.289694 GCATACCACCACAAGAGAGTGT 60.290 50.000 0.00 0.00 37.82 3.55
2866 11018 1.739067 AACTCTAGGCGCCATGTTTC 58.261 50.000 31.54 0.00 0.00 2.78
2937 11092 4.911514 TTTGCAGGTCTTTTAGTTGGTC 57.088 40.909 0.00 0.00 0.00 4.02
2978 11169 8.579850 AAGCTATATGTTGGTTCTTTGAATCA 57.420 30.769 0.00 0.00 0.00 2.57
2980 11171 6.914757 GCTATATGTTGGTTCTTTGAATCAGC 59.085 38.462 1.38 1.38 0.00 4.26
2995 11190 4.158394 TGAATCAGCCTGGCAATTCTAAAC 59.842 41.667 30.31 16.07 35.50 2.01
3011 11268 4.274147 TCTAAACCCAACTTCACTTTGCA 58.726 39.130 0.00 0.00 0.00 4.08
3079 11353 4.515567 GGGATAATCCTTTTCTGCTTACCG 59.484 45.833 0.00 0.00 36.57 4.02
3095 11372 1.308069 ACCGTTGCCAGATGATGCAC 61.308 55.000 0.00 0.00 37.18 4.57
3184 11467 1.250328 TCGCCCAATATACGACGGAT 58.750 50.000 0.00 0.00 0.00 4.18
3274 11557 5.600898 TGGGGAGAAGATCATCAAATACGTA 59.399 40.000 0.00 0.00 0.00 3.57
3311 11616 4.275936 ACACAGTTTTATGCAGTGAGTTCC 59.724 41.667 6.97 0.00 34.47 3.62
3317 11622 6.265196 AGTTTTATGCAGTGAGTTCCATCAAA 59.735 34.615 0.00 0.00 0.00 2.69
3327 11650 4.099266 TGAGTTCCATCAAACAAACCCTTG 59.901 41.667 0.00 0.00 38.61 3.61
3349 11676 7.148171 CCTTGTGATTAATGGAGAGAACCTTTC 60.148 40.741 0.00 0.00 0.00 2.62
3354 11681 7.607991 TGATTAATGGAGAGAACCTTTCTTGTC 59.392 37.037 0.00 0.00 40.87 3.18
3440 11767 2.084546 GAGGCTAAAGTGGCATCGTTT 58.915 47.619 0.00 0.00 31.17 3.60
3684 12125 3.476552 CGCACCAGATACCAACCATAAT 58.523 45.455 0.00 0.00 0.00 1.28
3702 12145 6.372659 ACCATAATTGTGCAGAGTTAGAACAG 59.627 38.462 5.11 0.00 0.00 3.16
3721 12201 8.329203 AGAACAGTCCTAGTTCATCATTTTTC 57.671 34.615 8.54 0.00 45.93 2.29
3818 12298 3.620488 GCTGACCCATTTGACTATGGAA 58.380 45.455 4.26 0.00 46.63 3.53
4121 13344 3.712655 CGGTGCTCGTGTTCAACA 58.287 55.556 0.00 0.00 0.00 3.33
4413 13643 8.894409 TTTTCTGTTATGCAAGAAATCGTATG 57.106 30.769 11.14 0.00 31.51 2.39
4416 13646 6.816140 TCTGTTATGCAAGAAATCGTATGTGA 59.184 34.615 0.00 0.00 0.00 3.58
4418 13648 7.240674 TGTTATGCAAGAAATCGTATGTGAAC 58.759 34.615 0.00 0.00 0.00 3.18
4420 13650 5.281693 TGCAAGAAATCGTATGTGAACTG 57.718 39.130 0.00 0.00 0.00 3.16
4423 13653 6.593770 TGCAAGAAATCGTATGTGAACTGTAT 59.406 34.615 0.00 0.00 0.00 2.29
4424 13654 7.762159 TGCAAGAAATCGTATGTGAACTGTATA 59.238 33.333 0.00 0.00 0.00 1.47
4425 13655 8.600625 GCAAGAAATCGTATGTGAACTGTATAA 58.399 33.333 0.00 0.00 0.00 0.98
4443 14258 9.959749 ACTGTATAATTAAAATACAAATGCGGG 57.040 29.630 12.51 5.08 38.87 6.13
4444 14259 8.804688 TGTATAATTAAAATACAAATGCGGGC 57.195 30.769 10.16 0.00 36.99 6.13
4449 14264 2.888834 AATACAAATGCGGGCATTCC 57.111 45.000 18.26 0.00 44.86 3.01
4463 14278 5.121221 GGGCATTCCGGATTTGTAAATAG 57.879 43.478 4.15 0.00 0.00 1.73
4465 14280 5.278315 GGGCATTCCGGATTTGTAAATAGTC 60.278 44.000 4.15 0.00 0.00 2.59
4483 14298 0.881118 TCGGATGCCAAGCAAAGTTC 59.119 50.000 0.00 0.00 43.62 3.01
4485 14300 0.109132 GGATGCCAAGCAAAGTTCCG 60.109 55.000 0.00 0.00 43.62 4.30
4490 14305 1.669795 GCCAAGCAAAGTTCCGGATTG 60.670 52.381 4.15 8.64 0.00 2.67
4493 14308 3.568538 CAAGCAAAGTTCCGGATTGAAG 58.431 45.455 18.34 5.10 29.93 3.02
4495 14310 2.814336 AGCAAAGTTCCGGATTGAAGTC 59.186 45.455 18.34 2.73 0.00 3.01
4502 14317 1.486310 TCCGGATTGAAGTCCATGGAG 59.514 52.381 16.81 0.00 38.21 3.86
4505 14320 1.064463 GGATTGAAGTCCATGGAGGCA 60.064 52.381 16.81 10.86 38.20 4.75
4508 14323 0.036732 TGAAGTCCATGGAGGCACAC 59.963 55.000 16.81 2.26 37.29 3.82
4509 14324 0.036732 GAAGTCCATGGAGGCACACA 59.963 55.000 16.81 0.00 37.29 3.72
4510 14325 0.250901 AAGTCCATGGAGGCACACAC 60.251 55.000 16.81 0.55 37.29 3.82
4511 14326 1.073025 GTCCATGGAGGCACACACA 59.927 57.895 16.81 0.00 37.29 3.72
4512 14327 0.537143 GTCCATGGAGGCACACACAA 60.537 55.000 16.81 0.00 37.29 3.33
4513 14328 0.184692 TCCATGGAGGCACACACAAA 59.815 50.000 11.44 0.00 37.29 2.83
4514 14329 1.039068 CCATGGAGGCACACACAAAA 58.961 50.000 5.56 0.00 0.00 2.44
4515 14330 1.000060 CCATGGAGGCACACACAAAAG 60.000 52.381 5.56 0.00 0.00 2.27
4516 14331 1.955778 CATGGAGGCACACACAAAAGA 59.044 47.619 0.00 0.00 0.00 2.52
4517 14332 2.363306 TGGAGGCACACACAAAAGAT 57.637 45.000 0.00 0.00 0.00 2.40
4518 14333 3.500448 TGGAGGCACACACAAAAGATA 57.500 42.857 0.00 0.00 0.00 1.98
4519 14334 4.032960 TGGAGGCACACACAAAAGATAT 57.967 40.909 0.00 0.00 0.00 1.63
4520 14335 4.406456 TGGAGGCACACACAAAAGATATT 58.594 39.130 0.00 0.00 0.00 1.28
4521 14336 5.565509 TGGAGGCACACACAAAAGATATTA 58.434 37.500 0.00 0.00 0.00 0.98
4522 14337 6.007076 TGGAGGCACACACAAAAGATATTAA 58.993 36.000 0.00 0.00 0.00 1.40
4523 14338 6.150976 TGGAGGCACACACAAAAGATATTAAG 59.849 38.462 0.00 0.00 0.00 1.85
4559 14374 2.496070 CGAGTAGATCCCACTCCAAACA 59.504 50.000 15.82 0.00 39.43 2.83
4566 14381 1.216678 TCCCACTCCAAACACCATGTT 59.783 47.619 0.00 0.00 43.41 2.71
4636 14451 0.896923 TTGCCCCACATTCAAGCATC 59.103 50.000 0.00 0.00 32.67 3.91
4637 14452 0.251698 TGCCCCACATTCAAGCATCA 60.252 50.000 0.00 0.00 0.00 3.07
4655 14470 5.241064 AGCATCAGGATTTCATCAATGCTAC 59.759 40.000 14.15 0.00 41.45 3.58
4662 14477 6.016777 AGGATTTCATCAATGCTACGATTTCC 60.017 38.462 0.00 0.00 41.57 3.13
4667 14482 3.897239 TCAATGCTACGATTTCCCCATT 58.103 40.909 0.00 0.00 0.00 3.16
4668 14483 4.277476 TCAATGCTACGATTTCCCCATTT 58.723 39.130 0.00 0.00 0.00 2.32
4669 14484 4.709397 TCAATGCTACGATTTCCCCATTTT 59.291 37.500 0.00 0.00 0.00 1.82
4670 14485 5.186797 TCAATGCTACGATTTCCCCATTTTT 59.813 36.000 0.00 0.00 0.00 1.94
4726 14541 5.230182 CAGTTGTAGAAGCTCACATACACA 58.770 41.667 0.00 0.00 0.00 3.72
4727 14542 5.871524 CAGTTGTAGAAGCTCACATACACAT 59.128 40.000 0.00 0.00 0.00 3.21
4730 14545 7.708322 AGTTGTAGAAGCTCACATACACATATG 59.292 37.037 0.00 0.00 43.46 1.78
4759 14574 2.546368 TCCTTTATGAACACACGCACAC 59.454 45.455 0.00 0.00 0.00 3.82
4760 14575 2.350388 CCTTTATGAACACACGCACACC 60.350 50.000 0.00 0.00 0.00 4.16
4766 14581 0.685097 AACACACGCACACCCTATCT 59.315 50.000 0.00 0.00 0.00 1.98
4767 14582 0.246635 ACACACGCACACCCTATCTC 59.753 55.000 0.00 0.00 0.00 2.75
4775 14590 2.630098 GCACACCCTATCTCTATGAGCA 59.370 50.000 0.00 0.00 0.00 4.26
4779 14594 4.343526 ACACCCTATCTCTATGAGCACTTG 59.656 45.833 0.00 0.00 0.00 3.16
4782 14597 4.558178 CCTATCTCTATGAGCACTTGCAG 58.442 47.826 3.62 0.00 45.16 4.41
4814 14638 3.364023 CGTCCTGACATTTACGAAGTCAC 59.636 47.826 0.00 0.00 43.93 3.67
4817 14641 3.432252 CCTGACATTTACGAAGTCACCAC 59.568 47.826 0.00 0.00 43.93 4.16
4823 14647 2.758770 TACGAAGTCACCACAGGCGC 62.759 60.000 0.00 0.00 43.93 6.53
4847 14671 1.955080 GTAATCGACGGGATGTCTCCT 59.045 52.381 0.00 0.00 45.87 3.69
4848 14672 1.033574 AATCGACGGGATGTCTCCTC 58.966 55.000 0.00 0.00 45.87 3.71
4854 14678 2.764128 GGATGTCTCCTCCCGCCA 60.764 66.667 0.00 0.00 38.65 5.69
4860 14700 2.751837 CTCCTCCCGCCAAAAGCC 60.752 66.667 0.00 0.00 38.78 4.35
4862 14702 3.064324 CCTCCCGCCAAAAGCCTG 61.064 66.667 0.00 0.00 38.78 4.85
4870 14710 2.993220 CCGCCAAAAGCCTGAAATAAAC 59.007 45.455 0.00 0.00 38.78 2.01
4871 14711 2.993220 CGCCAAAAGCCTGAAATAAACC 59.007 45.455 0.00 0.00 38.78 3.27
4872 14712 3.334691 GCCAAAAGCCTGAAATAAACCC 58.665 45.455 0.00 0.00 34.35 4.11
4876 14716 3.542969 AAGCCTGAAATAAACCCAGGT 57.457 42.857 0.00 0.00 46.86 4.00
4883 14723 6.459161 GCCTGAAATAAACCCAGGTAAATACG 60.459 42.308 0.00 0.00 46.86 3.06
4885 14725 7.012044 CCTGAAATAAACCCAGGTAAATACGAG 59.988 40.741 0.00 0.00 41.81 4.18
4887 14727 2.304751 AACCCAGGTAAATACGAGCG 57.695 50.000 0.00 0.00 0.00 5.03
4893 14733 3.386486 CAGGTAAATACGAGCGCCAATA 58.614 45.455 2.29 0.00 0.00 1.90
4894 14734 3.994392 CAGGTAAATACGAGCGCCAATAT 59.006 43.478 2.29 0.00 0.00 1.28
4900 14740 1.571919 ACGAGCGCCAATATCAAGTC 58.428 50.000 2.29 0.00 0.00 3.01
4901 14741 1.137086 ACGAGCGCCAATATCAAGTCT 59.863 47.619 2.29 0.00 0.00 3.24
4902 14742 2.361119 ACGAGCGCCAATATCAAGTCTA 59.639 45.455 2.29 0.00 0.00 2.59
4903 14743 2.983136 CGAGCGCCAATATCAAGTCTAG 59.017 50.000 2.29 0.00 0.00 2.43
4904 14744 3.321497 GAGCGCCAATATCAAGTCTAGG 58.679 50.000 2.29 0.00 0.00 3.02
4906 14746 3.060602 GCGCCAATATCAAGTCTAGGAC 58.939 50.000 0.00 0.00 0.00 3.85
4908 14748 3.243434 CGCCAATATCAAGTCTAGGACGT 60.243 47.826 0.00 0.00 37.67 4.34
4915 14755 4.500603 TCAAGTCTAGGACGTGAACTTC 57.499 45.455 12.31 0.00 44.93 3.01
4916 14756 3.887110 TCAAGTCTAGGACGTGAACTTCA 59.113 43.478 12.31 0.00 44.93 3.02
4917 14757 4.340097 TCAAGTCTAGGACGTGAACTTCAA 59.660 41.667 12.31 0.00 44.93 2.69
4918 14758 4.506886 AGTCTAGGACGTGAACTTCAAG 57.493 45.455 0.00 3.43 37.67 3.02
4919 14759 3.256136 AGTCTAGGACGTGAACTTCAAGG 59.744 47.826 9.20 0.64 37.67 3.61
4922 14777 3.771577 AGGACGTGAACTTCAAGGAAT 57.228 42.857 9.20 0.00 30.01 3.01
4929 14784 4.091509 CGTGAACTTCAAGGAATCTAACCG 59.908 45.833 0.00 0.00 0.00 4.44
4940 14795 2.048444 ATCTAACCGTCCGAGCTACA 57.952 50.000 0.00 0.00 0.00 2.74
4944 14799 0.892358 AACCGTCCGAGCTACACTCA 60.892 55.000 0.00 0.00 46.63 3.41
4946 14801 1.306642 CCGTCCGAGCTACACTCAGT 61.307 60.000 0.00 0.00 46.63 3.41
4950 14805 3.314339 CGAGCTACACTCAGTTCGG 57.686 57.895 1.99 0.00 46.63 4.30
4952 14807 1.402259 CGAGCTACACTCAGTTCGGAT 59.598 52.381 1.99 0.00 46.63 4.18
4954 14809 3.064958 CGAGCTACACTCAGTTCGGATTA 59.935 47.826 1.99 0.00 46.63 1.75
4960 14815 6.144724 GCTACACTCAGTTCGGATTATGATTC 59.855 42.308 0.00 0.00 0.00 2.52
4962 14817 4.752101 CACTCAGTTCGGATTATGATTCCC 59.248 45.833 0.00 0.00 0.00 3.97
4964 14819 5.072329 ACTCAGTTCGGATTATGATTCCCAT 59.928 40.000 0.00 0.00 39.25 4.00
4965 14820 5.940617 TCAGTTCGGATTATGATTCCCATT 58.059 37.500 0.00 0.00 36.71 3.16
4968 14823 5.010012 AGTTCGGATTATGATTCCCATTTGC 59.990 40.000 0.00 0.00 36.71 3.68
4969 14824 4.468713 TCGGATTATGATTCCCATTTGCA 58.531 39.130 0.00 0.00 36.71 4.08
4970 14825 4.892345 TCGGATTATGATTCCCATTTGCAA 59.108 37.500 0.00 0.00 36.71 4.08
4971 14826 5.009911 TCGGATTATGATTCCCATTTGCAAG 59.990 40.000 0.00 0.00 36.71 4.01
4972 14827 5.009911 CGGATTATGATTCCCATTTGCAAGA 59.990 40.000 0.00 0.00 36.71 3.02
4973 14828 6.461370 CGGATTATGATTCCCATTTGCAAGAA 60.461 38.462 0.00 0.00 36.71 2.52
4974 14829 6.703165 GGATTATGATTCCCATTTGCAAGAAC 59.297 38.462 0.00 0.00 36.71 3.01
4977 14832 3.258872 TGATTCCCATTTGCAAGAACCTG 59.741 43.478 0.00 0.00 0.00 4.00
4978 14833 1.631405 TCCCATTTGCAAGAACCTGG 58.369 50.000 0.00 3.44 0.00 4.45
4980 14835 1.273327 CCCATTTGCAAGAACCTGGAC 59.727 52.381 0.00 0.00 0.00 4.02
4981 14836 1.273327 CCATTTGCAAGAACCTGGACC 59.727 52.381 0.00 0.00 0.00 4.46
4982 14837 1.273327 CATTTGCAAGAACCTGGACCC 59.727 52.381 0.00 0.00 0.00 4.46
4983 14838 0.555769 TTTGCAAGAACCTGGACCCT 59.444 50.000 0.00 0.00 0.00 4.34
4984 14839 1.440618 TTGCAAGAACCTGGACCCTA 58.559 50.000 0.00 0.00 0.00 3.53
4985 14840 1.668826 TGCAAGAACCTGGACCCTAT 58.331 50.000 0.00 0.00 0.00 2.57
4986 14841 1.281867 TGCAAGAACCTGGACCCTATG 59.718 52.381 0.00 0.00 0.00 2.23
4987 14842 1.408822 GCAAGAACCTGGACCCTATGG 60.409 57.143 0.00 0.00 37.80 2.74
4989 14844 2.171448 CAAGAACCTGGACCCTATGGAG 59.829 54.545 0.00 0.00 34.81 3.86
4990 14845 0.470341 GAACCTGGACCCTATGGAGC 59.530 60.000 0.00 0.00 34.81 4.70
4992 14847 2.511452 CCTGGACCCTATGGAGCCG 61.511 68.421 0.00 0.00 33.93 5.52
4994 14849 1.749334 CTGGACCCTATGGAGCCGAC 61.749 65.000 0.00 0.00 33.93 4.79
4995 14850 1.760875 GGACCCTATGGAGCCGACA 60.761 63.158 0.00 0.00 34.81 4.35
4996 14851 1.442148 GACCCTATGGAGCCGACAC 59.558 63.158 0.00 0.00 34.81 3.67
4997 14852 2.351336 GACCCTATGGAGCCGACACG 62.351 65.000 0.00 0.00 34.81 4.49
5007 14862 3.991051 CCGACACGGGCACTGACT 61.991 66.667 2.00 0.00 44.15 3.41
5008 14863 2.632544 CCGACACGGGCACTGACTA 61.633 63.158 2.00 0.00 44.15 2.59
5009 14864 1.287815 CGACACGGGCACTGACTAA 59.712 57.895 0.00 0.00 38.67 2.24
5010 14865 0.319211 CGACACGGGCACTGACTAAA 60.319 55.000 0.00 0.00 38.67 1.85
5011 14866 1.870580 CGACACGGGCACTGACTAAAA 60.871 52.381 0.00 0.00 38.67 1.52
5012 14867 2.215196 GACACGGGCACTGACTAAAAA 58.785 47.619 0.00 0.00 38.67 1.94
5050 14905 7.040548 CCAAACATTTTTGTAATGGAGCCAAAT 60.041 33.333 3.78 0.00 40.61 2.32
5060 14915 5.823861 AATGGAGCCAAATTTTTACCAGT 57.176 34.783 0.00 0.00 0.00 4.00
5061 14916 4.599047 TGGAGCCAAATTTTTACCAGTG 57.401 40.909 0.00 0.00 0.00 3.66
5065 14920 4.156477 AGCCAAATTTTTACCAGTGCCTA 58.844 39.130 0.00 0.00 0.00 3.93
5071 14926 8.845227 CCAAATTTTTACCAGTGCCTAAAATTT 58.155 29.630 17.67 17.67 43.56 1.82
5072 14927 9.877137 CAAATTTTTACCAGTGCCTAAAATTTC 57.123 29.630 19.15 0.00 42.14 2.17
5073 14928 7.883229 ATTTTTACCAGTGCCTAAAATTTCG 57.117 32.000 0.00 0.00 0.00 3.46
5074 14929 6.394025 TTTTACCAGTGCCTAAAATTTCGT 57.606 33.333 0.00 0.00 0.00 3.85
5075 14930 7.507733 TTTTACCAGTGCCTAAAATTTCGTA 57.492 32.000 0.00 0.00 0.00 3.43
5076 14931 6.730960 TTACCAGTGCCTAAAATTTCGTAG 57.269 37.500 0.00 0.00 0.00 3.51
5077 14932 4.648651 ACCAGTGCCTAAAATTTCGTAGT 58.351 39.130 0.00 0.00 0.00 2.73
5094 14949 3.425625 CGTAGTGCGGCAAATATGTGTTT 60.426 43.478 3.23 0.00 36.85 2.83
5160 15015 8.084684 AGCTAAAGCAGAAAATAGAAAAAGTGG 58.915 33.333 4.54 0.00 45.16 4.00
5161 15016 8.082242 GCTAAAGCAGAAAATAGAAAAAGTGGA 58.918 33.333 0.00 0.00 41.59 4.02
5162 15017 9.965824 CTAAAGCAGAAAATAGAAAAAGTGGAA 57.034 29.630 0.00 0.00 0.00 3.53
5163 15018 8.877808 AAAGCAGAAAATAGAAAAAGTGGAAG 57.122 30.769 0.00 0.00 0.00 3.46
5164 15019 7.823745 AGCAGAAAATAGAAAAAGTGGAAGA 57.176 32.000 0.00 0.00 0.00 2.87
5165 15020 7.880105 AGCAGAAAATAGAAAAAGTGGAAGAG 58.120 34.615 0.00 0.00 0.00 2.85
5166 15021 7.040132 AGCAGAAAATAGAAAAAGTGGAAGAGG 60.040 37.037 0.00 0.00 0.00 3.69
5167 15022 7.040409 GCAGAAAATAGAAAAAGTGGAAGAGGA 60.040 37.037 0.00 0.00 0.00 3.71
5168 15023 8.850156 CAGAAAATAGAAAAAGTGGAAGAGGAA 58.150 33.333 0.00 0.00 0.00 3.36
5169 15024 9.593565 AGAAAATAGAAAAAGTGGAAGAGGAAT 57.406 29.630 0.00 0.00 0.00 3.01
5170 15025 9.631452 GAAAATAGAAAAAGTGGAAGAGGAATG 57.369 33.333 0.00 0.00 0.00 2.67
5171 15026 8.712228 AAATAGAAAAAGTGGAAGAGGAATGT 57.288 30.769 0.00 0.00 0.00 2.71
5172 15027 8.712228 AATAGAAAAAGTGGAAGAGGAATGTT 57.288 30.769 0.00 0.00 0.00 2.71
5173 15028 8.712228 ATAGAAAAAGTGGAAGAGGAATGTTT 57.288 30.769 0.00 0.00 0.00 2.83
5174 15029 7.423844 AGAAAAAGTGGAAGAGGAATGTTTT 57.576 32.000 0.00 0.00 0.00 2.43
5175 15030 7.851228 AGAAAAAGTGGAAGAGGAATGTTTTT 58.149 30.769 0.00 0.00 0.00 1.94
5194 15049 4.581309 TTTTCCATGAGCTTCTCCATCT 57.419 40.909 0.00 0.00 0.00 2.90
5195 15050 4.581309 TTTCCATGAGCTTCTCCATCTT 57.419 40.909 0.00 0.00 0.00 2.40
5196 15051 4.581309 TTCCATGAGCTTCTCCATCTTT 57.419 40.909 0.00 0.00 0.00 2.52
5197 15052 4.148128 TCCATGAGCTTCTCCATCTTTC 57.852 45.455 0.00 0.00 0.00 2.62
5198 15053 3.779183 TCCATGAGCTTCTCCATCTTTCT 59.221 43.478 0.00 0.00 0.00 2.52
5199 15054 4.226846 TCCATGAGCTTCTCCATCTTTCTT 59.773 41.667 0.00 0.00 0.00 2.52
5200 15055 4.948621 CCATGAGCTTCTCCATCTTTCTTT 59.051 41.667 0.00 0.00 0.00 2.52
5201 15056 5.066246 CCATGAGCTTCTCCATCTTTCTTTC 59.934 44.000 0.00 0.00 0.00 2.62
5202 15057 5.495926 TGAGCTTCTCCATCTTTCTTTCT 57.504 39.130 0.00 0.00 0.00 2.52
5203 15058 5.874093 TGAGCTTCTCCATCTTTCTTTCTT 58.126 37.500 0.00 0.00 0.00 2.52
5204 15059 6.302269 TGAGCTTCTCCATCTTTCTTTCTTT 58.698 36.000 0.00 0.00 0.00 2.52
5205 15060 6.429385 TGAGCTTCTCCATCTTTCTTTCTTTC 59.571 38.462 0.00 0.00 0.00 2.62
5206 15061 6.541907 AGCTTCTCCATCTTTCTTTCTTTCT 58.458 36.000 0.00 0.00 0.00 2.52
5207 15062 7.003482 AGCTTCTCCATCTTTCTTTCTTTCTT 58.997 34.615 0.00 0.00 0.00 2.52
5208 15063 7.174772 AGCTTCTCCATCTTTCTTTCTTTCTTC 59.825 37.037 0.00 0.00 0.00 2.87
5209 15064 7.574779 GCTTCTCCATCTTTCTTTCTTTCTTCC 60.575 40.741 0.00 0.00 0.00 3.46
5210 15065 6.241645 TCTCCATCTTTCTTTCTTTCTTCCC 58.758 40.000 0.00 0.00 0.00 3.97
5211 15066 5.003804 TCCATCTTTCTTTCTTTCTTCCCG 58.996 41.667 0.00 0.00 0.00 5.14
5212 15067 5.003804 CCATCTTTCTTTCTTTCTTCCCGA 58.996 41.667 0.00 0.00 0.00 5.14
5213 15068 5.123027 CCATCTTTCTTTCTTTCTTCCCGAG 59.877 44.000 0.00 0.00 0.00 4.63
5214 15069 4.642429 TCTTTCTTTCTTTCTTCCCGAGG 58.358 43.478 0.00 0.00 0.00 4.63
5215 15070 4.347000 TCTTTCTTTCTTTCTTCCCGAGGA 59.653 41.667 0.00 0.00 0.00 3.71
5216 15071 3.679824 TCTTTCTTTCTTCCCGAGGAC 57.320 47.619 0.00 0.00 0.00 3.85
5217 15072 2.969950 TCTTTCTTTCTTCCCGAGGACA 59.030 45.455 0.00 0.00 0.00 4.02
5218 15073 3.006967 TCTTTCTTTCTTCCCGAGGACAG 59.993 47.826 0.00 0.00 0.00 3.51
5219 15074 1.267121 TCTTTCTTCCCGAGGACAGG 58.733 55.000 0.00 0.00 0.00 4.00
5220 15075 0.977395 CTTTCTTCCCGAGGACAGGT 59.023 55.000 0.00 0.00 0.00 4.00
5221 15076 0.974383 TTTCTTCCCGAGGACAGGTC 59.026 55.000 0.00 0.00 0.00 3.85
5222 15077 0.114560 TTCTTCCCGAGGACAGGTCT 59.885 55.000 0.00 0.00 0.00 3.85
5223 15078 0.612174 TCTTCCCGAGGACAGGTCTG 60.612 60.000 0.00 0.00 0.00 3.51
5224 15079 0.612174 CTTCCCGAGGACAGGTCTGA 60.612 60.000 4.84 0.00 0.00 3.27
5225 15080 0.898789 TTCCCGAGGACAGGTCTGAC 60.899 60.000 4.84 0.00 0.00 3.51
5226 15081 2.352032 CCCGAGGACAGGTCTGACC 61.352 68.421 19.20 19.20 43.96 4.02
5230 15085 2.574399 GGACAGGTCTGACCGAGC 59.426 66.667 20.49 13.06 44.90 5.03
5231 15086 2.574399 GACAGGTCTGACCGAGCC 59.426 66.667 20.49 7.00 44.90 4.70
5232 15087 3.343788 GACAGGTCTGACCGAGCCG 62.344 68.421 20.49 10.62 44.90 5.52
5233 15088 3.062466 CAGGTCTGACCGAGCCGA 61.062 66.667 20.49 0.00 44.90 5.54
5234 15089 2.043852 AGGTCTGACCGAGCCGAT 60.044 61.111 20.49 0.00 44.90 4.18
5235 15090 1.101635 CAGGTCTGACCGAGCCGATA 61.102 60.000 20.49 0.00 44.90 2.92
5236 15091 0.820074 AGGTCTGACCGAGCCGATAG 60.820 60.000 20.49 0.00 44.90 2.08
5237 15092 0.818445 GGTCTGACCGAGCCGATAGA 60.818 60.000 11.71 0.00 39.76 1.98
5238 15093 1.240256 GTCTGACCGAGCCGATAGAT 58.760 55.000 0.00 0.00 39.76 1.98
5239 15094 1.198178 GTCTGACCGAGCCGATAGATC 59.802 57.143 0.00 0.00 39.76 2.75
5240 15095 1.072489 TCTGACCGAGCCGATAGATCT 59.928 52.381 0.00 0.00 39.76 2.75
5241 15096 1.466950 CTGACCGAGCCGATAGATCTC 59.533 57.143 0.00 0.00 39.76 2.75
5250 15105 1.091537 CGATAGATCTCGGCTCTCCC 58.908 60.000 0.00 0.00 35.03 4.30
5251 15106 1.470051 GATAGATCTCGGCTCTCCCC 58.530 60.000 0.00 0.00 0.00 4.81
5252 15107 1.005450 GATAGATCTCGGCTCTCCCCT 59.995 57.143 0.00 0.00 0.00 4.79
5253 15108 0.402504 TAGATCTCGGCTCTCCCCTC 59.597 60.000 0.00 0.00 0.00 4.30
5254 15109 1.152830 GATCTCGGCTCTCCCCTCT 59.847 63.158 0.00 0.00 0.00 3.69
5255 15110 1.152567 ATCTCGGCTCTCCCCTCTG 60.153 63.158 0.00 0.00 0.00 3.35
5256 15111 1.650242 ATCTCGGCTCTCCCCTCTGA 61.650 60.000 0.00 0.00 0.00 3.27
5257 15112 2.043852 TCGGCTCTCCCCTCTGAC 60.044 66.667 0.00 0.00 0.00 3.51
5258 15113 3.522731 CGGCTCTCCCCTCTGACG 61.523 72.222 0.00 0.00 0.00 4.35
5259 15114 3.151022 GGCTCTCCCCTCTGACGG 61.151 72.222 0.00 0.00 0.00 4.79
5260 15115 3.844090 GCTCTCCCCTCTGACGGC 61.844 72.222 0.00 0.00 0.00 5.68
5261 15116 3.522731 CTCTCCCCTCTGACGGCG 61.523 72.222 4.80 4.80 0.00 6.46
5262 15117 3.997400 CTCTCCCCTCTGACGGCGA 62.997 68.421 16.62 0.00 0.00 5.54
5263 15118 3.827898 CTCCCCTCTGACGGCGAC 61.828 72.222 16.62 8.59 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 3467 2.215451 AATTGATGGGCCAGCGAGGT 62.215 55.000 18.02 5.01 40.61 3.85
68 3486 2.096248 GGGCGGTTGAATTGGTGATTA 58.904 47.619 0.00 0.00 0.00 1.75
70 3488 0.970427 GGGGCGGTTGAATTGGTGAT 60.970 55.000 0.00 0.00 0.00 3.06
115 3536 6.617371 ACCACAAGGGATCTAAATATCTGAGT 59.383 38.462 0.00 0.00 41.15 3.41
118 3539 6.000219 CCACCACAAGGGATCTAAATATCTG 59.000 44.000 0.00 0.00 41.15 2.90
178 3602 9.528018 GTTCAGGACTTAAATCATGTTCAAAAA 57.472 29.630 0.00 0.00 32.26 1.94
179 3603 8.912988 AGTTCAGGACTTAAATCATGTTCAAAA 58.087 29.630 0.00 0.00 33.92 2.44
180 3604 8.463930 AGTTCAGGACTTAAATCATGTTCAAA 57.536 30.769 0.00 0.00 33.92 2.69
181 3605 8.352201 CAAGTTCAGGACTTAAATCATGTTCAA 58.648 33.333 0.00 0.00 46.75 2.69
182 3606 7.719193 TCAAGTTCAGGACTTAAATCATGTTCA 59.281 33.333 0.00 0.00 46.75 3.18
183 3607 8.017946 GTCAAGTTCAGGACTTAAATCATGTTC 58.982 37.037 0.00 0.00 46.75 3.18
184 3608 7.502226 TGTCAAGTTCAGGACTTAAATCATGTT 59.498 33.333 0.00 0.00 46.75 2.71
185 3609 6.998074 TGTCAAGTTCAGGACTTAAATCATGT 59.002 34.615 0.00 0.00 46.75 3.21
186 3610 7.439157 TGTCAAGTTCAGGACTTAAATCATG 57.561 36.000 0.00 0.00 46.75 3.07
187 3611 9.388506 CTATGTCAAGTTCAGGACTTAAATCAT 57.611 33.333 0.00 0.56 46.75 2.45
188 3612 7.824289 CCTATGTCAAGTTCAGGACTTAAATCA 59.176 37.037 0.00 0.00 46.75 2.57
291 4347 5.373222 TCGAGAATTTCAGGGAACAGAAAA 58.627 37.500 0.00 0.00 46.87 2.29
297 4353 2.010497 GGCTCGAGAATTTCAGGGAAC 58.990 52.381 18.75 0.00 0.00 3.62
302 4358 3.254060 TCTTTCGGCTCGAGAATTTCAG 58.746 45.455 18.75 4.15 37.14 3.02
332 4388 6.081872 TCAACATGAAACACAACATGCATA 57.918 33.333 0.00 0.00 45.03 3.14
333 4389 4.946445 TCAACATGAAACACAACATGCAT 58.054 34.783 0.00 0.00 45.03 3.96
334 4390 4.382345 TCAACATGAAACACAACATGCA 57.618 36.364 0.00 0.00 45.03 3.96
335 4391 5.910637 ATTCAACATGAAACACAACATGC 57.089 34.783 0.00 0.00 45.03 4.06
457 5658 2.370849 ACGGTTGTCCAATGGTAGAACT 59.629 45.455 0.00 0.00 0.00 3.01
467 5668 6.392354 CAGTAATAGAACTACGGTTGTCCAA 58.608 40.000 0.00 0.00 35.58 3.53
468 5669 5.105635 CCAGTAATAGAACTACGGTTGTCCA 60.106 44.000 0.00 0.00 35.58 4.02
469 5670 5.126061 TCCAGTAATAGAACTACGGTTGTCC 59.874 44.000 0.00 0.00 35.58 4.02
471 5672 5.105595 GGTCCAGTAATAGAACTACGGTTGT 60.106 44.000 0.00 0.00 35.58 3.32
472 5673 5.105635 TGGTCCAGTAATAGAACTACGGTTG 60.106 44.000 0.00 0.00 35.58 3.77
473 5674 5.018809 TGGTCCAGTAATAGAACTACGGTT 58.981 41.667 0.00 0.00 38.52 4.44
474 5675 4.400567 GTGGTCCAGTAATAGAACTACGGT 59.599 45.833 0.00 0.00 0.00 4.83
475 5676 4.202090 GGTGGTCCAGTAATAGAACTACGG 60.202 50.000 0.00 0.00 0.00 4.02
476 5677 4.400251 TGGTGGTCCAGTAATAGAACTACG 59.600 45.833 0.00 0.00 39.03 3.51
477 5678 5.927281 TGGTGGTCCAGTAATAGAACTAC 57.073 43.478 0.00 0.00 39.03 2.73
496 5697 6.199557 TGATGGGCAACATATAAGTATGGT 57.800 37.500 1.09 0.00 41.64 3.55
554 5771 2.733671 CGAGTGTGCATGCGTCTGG 61.734 63.158 14.09 8.49 0.00 3.86
564 5781 0.649475 GATGTGAGATGCGAGTGTGC 59.351 55.000 0.00 0.00 0.00 4.57
597 5814 8.299262 GCACGGGCTCATGTAAATATATATAG 57.701 38.462 0.00 0.00 36.96 1.31
617 5834 1.165907 TCTGGTTGAGCAAAGCACGG 61.166 55.000 0.43 0.00 41.27 4.94
618 5835 0.662619 TTCTGGTTGAGCAAAGCACG 59.337 50.000 0.43 0.00 41.27 5.34
619 5836 2.869233 TTTCTGGTTGAGCAAAGCAC 57.131 45.000 0.43 0.00 41.27 4.40
620 5837 3.225104 AGATTTCTGGTTGAGCAAAGCA 58.775 40.909 4.30 4.30 43.85 3.91
621 5838 3.930634 AGATTTCTGGTTGAGCAAAGC 57.069 42.857 0.00 0.00 36.78 3.51
622 5839 6.998968 ATCTAGATTTCTGGTTGAGCAAAG 57.001 37.500 0.00 0.00 0.00 2.77
623 5840 7.064609 CGTTATCTAGATTTCTGGTTGAGCAAA 59.935 37.037 11.25 0.00 0.00 3.68
624 5841 6.535150 CGTTATCTAGATTTCTGGTTGAGCAA 59.465 38.462 11.25 0.00 0.00 3.91
626 5843 5.463724 CCGTTATCTAGATTTCTGGTTGAGC 59.536 44.000 11.25 0.00 0.00 4.26
627 5844 6.806751 TCCGTTATCTAGATTTCTGGTTGAG 58.193 40.000 11.25 0.00 0.00 3.02
628 5845 6.605995 TCTCCGTTATCTAGATTTCTGGTTGA 59.394 38.462 11.25 8.34 0.00 3.18
629 5846 6.697892 GTCTCCGTTATCTAGATTTCTGGTTG 59.302 42.308 11.25 6.51 0.00 3.77
630 5847 6.608002 AGTCTCCGTTATCTAGATTTCTGGTT 59.392 38.462 11.25 0.00 0.00 3.67
632 5849 6.566942 CGAGTCTCCGTTATCTAGATTTCTGG 60.567 46.154 11.25 8.39 0.00 3.86
633 5850 6.203145 TCGAGTCTCCGTTATCTAGATTTCTG 59.797 42.308 11.25 1.78 0.00 3.02
652 8380 4.315803 TGGATCTTTGAAAGGTTCGAGTC 58.684 43.478 4.94 0.00 0.00 3.36
777 8519 0.524862 ATTTGCAGCCTCTTTCGCAG 59.475 50.000 0.00 0.00 35.47 5.18
778 8520 1.819928 TATTTGCAGCCTCTTTCGCA 58.180 45.000 0.00 0.00 0.00 5.10
779 8521 2.919666 TTATTTGCAGCCTCTTTCGC 57.080 45.000 0.00 0.00 0.00 4.70
787 8529 6.140303 TCTTCATCTGAATTATTTGCAGCC 57.860 37.500 0.00 0.00 33.01 4.85
788 8530 8.470040 TTTTCTTCATCTGAATTATTTGCAGC 57.530 30.769 0.00 0.00 33.01 5.25
821 8563 7.307160 CGGCAGAAAGTTATTAATGCTCGAATA 60.307 37.037 0.00 0.00 32.98 1.75
828 8570 4.574828 TCTCCGGCAGAAAGTTATTAATGC 59.425 41.667 0.00 0.00 32.10 3.56
846 8588 5.050490 TCTTTCAGTTCAGACTTTTCTCCG 58.950 41.667 0.00 0.00 32.54 4.63
935 8677 1.067495 GCTGCTATGGAGGGATCGTAC 60.067 57.143 0.00 0.00 0.00 3.67
1255 9010 4.142038 ACAAGTTGATTTAGTGGTGGGTC 58.858 43.478 10.54 0.00 0.00 4.46
1276 9031 1.388547 TCAAGGTGTTGCTGTGGAAC 58.611 50.000 0.00 0.00 33.23 3.62
1305 9060 0.179045 ATGGCGCTATGAGGGTGTTC 60.179 55.000 5.07 0.00 0.00 3.18
1365 9123 2.243810 GTTGGTTGGTCCCAGCAATTA 58.756 47.619 10.48 0.00 37.94 1.40
1454 9212 1.191535 TGTATGGAACTAGCGCCACT 58.808 50.000 2.29 0.00 36.92 4.00
1465 9223 4.362677 AGAGAGGGTTAGCTTGTATGGAA 58.637 43.478 0.00 0.00 0.00 3.53
1593 9354 3.173151 TCCAAGAAGAGTGGTGAGCATA 58.827 45.455 0.00 0.00 37.43 3.14
1641 9402 2.073056 CCGTGCTTGTAGTTGTATGCA 58.927 47.619 0.00 0.00 0.00 3.96
1755 9639 4.691860 ACTATGATGCAAGTGAAACAGC 57.308 40.909 0.00 0.00 41.43 4.40
1757 9641 8.829612 CACATATACTATGATGCAAGTGAAACA 58.170 33.333 0.00 0.00 41.43 2.83
1874 9758 1.825474 CCGGTCATCTGGTAGTTGAGT 59.175 52.381 0.00 0.00 35.48 3.41
2267 10366 3.341043 CGCCGATGATCTTGCGGG 61.341 66.667 15.45 0.00 44.92 6.13
2309 10408 0.179234 TGCCTTGAGGTGTTTGTCGA 59.821 50.000 0.00 0.00 37.57 4.20
2314 10413 1.680338 GTGTCTGCCTTGAGGTGTTT 58.320 50.000 0.00 0.00 37.57 2.83
2351 10450 1.969064 TGTGTACCATGGCCGTTGC 60.969 57.895 13.04 0.00 0.00 4.17
2364 10463 0.249280 CAGTGGACGCACAGTGTGTA 60.249 55.000 23.73 2.51 41.77 2.90
2676 10793 1.170290 CCCACGGCGAAATATTCCCC 61.170 60.000 16.62 0.00 0.00 4.81
2786 10905 9.845740 GGTATGCTTATTTTTCCCCATTAATTT 57.154 29.630 0.00 0.00 0.00 1.82
2812 10938 3.452755 TGTGTACACTCTCTTGTGGTG 57.547 47.619 25.60 0.00 41.84 4.17
2823 10949 5.126067 AGTTTGCAGAAGATTGTGTACACT 58.874 37.500 25.60 7.54 0.00 3.55
2827 10953 7.217200 AGAGTTAGTTTGCAGAAGATTGTGTA 58.783 34.615 0.00 0.00 0.00 2.90
2840 10966 1.007580 GGCGCCTAGAGTTAGTTTGC 58.992 55.000 22.15 0.00 0.00 3.68
2866 11018 5.047306 TGGTAATATAGAGATTGTCCCTGCG 60.047 44.000 0.00 0.00 0.00 5.18
2978 11169 1.077005 TGGGTTTAGAATTGCCAGGCT 59.923 47.619 14.15 0.00 0.00 4.58
2980 11171 3.165071 AGTTGGGTTTAGAATTGCCAGG 58.835 45.455 0.00 0.00 0.00 4.45
2995 11190 5.466393 CCTAAAAATGCAAAGTGAAGTTGGG 59.534 40.000 0.00 0.00 0.00 4.12
3011 11268 2.766345 TCCGCGGTACACCTAAAAAT 57.234 45.000 27.15 0.00 0.00 1.82
3079 11353 1.226491 GCGTGCATCATCTGGCAAC 60.226 57.895 0.00 0.00 42.45 4.17
3095 11372 1.865865 AAAGTACTCACTGGTGTGCG 58.134 50.000 0.00 0.00 43.49 5.34
3118 11401 1.515631 CGGACGTATTGTGACGCATAC 59.484 52.381 0.00 0.00 46.87 2.39
3184 11467 3.734463 TGATGCTGTCACGGTTAAAAGA 58.266 40.909 0.00 0.00 0.00 2.52
3290 11573 4.460263 TGGAACTCACTGCATAAAACTGT 58.540 39.130 0.00 0.00 0.00 3.55
3311 11616 7.118101 CCATTAATCACAAGGGTTTGTTTGATG 59.882 37.037 0.00 0.00 45.01 3.07
3327 11650 7.391833 ACAAGAAAGGTTCTCTCCATTAATCAC 59.608 37.037 0.00 0.00 39.61 3.06
3349 11676 2.999355 GGAGAGCTGCTTACAAGACAAG 59.001 50.000 2.53 0.00 0.00 3.16
3354 11681 2.344950 CACTGGAGAGCTGCTTACAAG 58.655 52.381 2.53 6.74 0.00 3.16
3421 11748 2.200373 AAACGATGCCACTTTAGCCT 57.800 45.000 0.00 0.00 0.00 4.58
3425 11752 4.059511 TCGAAGAAAACGATGCCACTTTA 58.940 39.130 0.00 0.00 34.85 1.85
3440 11767 0.456221 GCGATGGACCTCTCGAAGAA 59.544 55.000 17.71 0.00 37.05 2.52
3684 12125 3.388024 AGGACTGTTCTAACTCTGCACAA 59.612 43.478 0.00 0.00 0.00 3.33
3702 12145 6.913170 TGCAAGAAAAATGATGAACTAGGAC 58.087 36.000 0.00 0.00 0.00 3.85
3721 12201 0.458669 GGGCTTCATCACCATGCAAG 59.541 55.000 0.00 0.00 0.00 4.01
3818 12298 1.146982 AGTGGGGTTAATGTTGCCACT 59.853 47.619 0.00 0.00 33.08 4.00
4004 13227 1.006102 CCGTCCTCCACACAGTGAC 60.006 63.158 7.81 0.00 35.23 3.67
4418 13648 8.911662 GCCCGCATTTGTATTTTAATTATACAG 58.088 33.333 9.54 3.22 39.07 2.74
4420 13650 8.804688 TGCCCGCATTTGTATTTTAATTATAC 57.195 30.769 0.00 0.00 0.00 1.47
4423 13653 7.439655 GGAATGCCCGCATTTGTATTTTAATTA 59.560 33.333 15.64 0.00 45.50 1.40
4424 13654 6.259829 GGAATGCCCGCATTTGTATTTTAATT 59.740 34.615 15.64 0.00 45.50 1.40
4425 13655 5.757808 GGAATGCCCGCATTTGTATTTTAAT 59.242 36.000 15.64 0.00 45.50 1.40
4426 13656 5.112686 GGAATGCCCGCATTTGTATTTTAA 58.887 37.500 15.64 0.00 45.50 1.52
4427 13657 4.688021 GGAATGCCCGCATTTGTATTTTA 58.312 39.130 15.64 0.00 45.50 1.52
4428 13658 3.530535 GGAATGCCCGCATTTGTATTTT 58.469 40.909 15.64 0.00 45.50 1.82
4430 13660 2.888834 GGAATGCCCGCATTTGTATT 57.111 45.000 15.64 0.00 45.50 1.89
4442 14257 5.560183 CGACTATTTACAAATCCGGAATGCC 60.560 44.000 9.01 0.00 0.00 4.40
4443 14258 5.440685 CGACTATTTACAAATCCGGAATGC 58.559 41.667 9.01 0.00 0.00 3.56
4444 14259 5.756347 TCCGACTATTTACAAATCCGGAATG 59.244 40.000 9.01 13.95 39.59 2.67
4449 14264 4.084013 GGCATCCGACTATTTACAAATCCG 60.084 45.833 0.00 0.00 0.00 4.18
4455 14270 3.202906 GCTTGGCATCCGACTATTTACA 58.797 45.455 0.00 0.00 0.00 2.41
4459 14274 2.418368 TTGCTTGGCATCCGACTATT 57.582 45.000 0.00 0.00 38.76 1.73
4462 14277 0.250901 ACTTTGCTTGGCATCCGACT 60.251 50.000 0.00 0.00 38.76 4.18
4463 14278 0.598065 AACTTTGCTTGGCATCCGAC 59.402 50.000 0.00 0.00 38.76 4.79
4465 14280 0.109132 GGAACTTTGCTTGGCATCCG 60.109 55.000 0.00 0.00 38.76 4.18
4483 14298 1.475751 CCTCCATGGACTTCAATCCGG 60.476 57.143 11.44 3.14 42.24 5.14
4485 14300 1.064463 TGCCTCCATGGACTTCAATCC 60.064 52.381 11.44 0.00 38.35 3.01
4490 14305 0.036732 TGTGTGCCTCCATGGACTTC 59.963 55.000 11.44 3.21 38.35 3.01
4493 14308 0.537143 TTGTGTGTGCCTCCATGGAC 60.537 55.000 11.44 2.34 38.35 4.02
4495 14310 1.000060 CTTTTGTGTGTGCCTCCATGG 60.000 52.381 4.97 4.97 39.35 3.66
4502 14317 8.810652 TTTTCTTAATATCTTTTGTGTGTGCC 57.189 30.769 0.00 0.00 0.00 5.01
4530 14345 5.012328 AGTGGGATCTACTCGATTGTTTC 57.988 43.478 0.00 0.00 30.84 2.78
4538 14353 2.496070 TGTTTGGAGTGGGATCTACTCG 59.504 50.000 18.11 0.00 44.24 4.18
4546 14361 0.850100 ACATGGTGTTTGGAGTGGGA 59.150 50.000 0.00 0.00 0.00 4.37
4559 14374 1.323412 TAGTGCCGCAAAAACATGGT 58.677 45.000 0.00 0.00 0.00 3.55
4566 14381 2.483014 ACTACCATAGTGCCGCAAAA 57.517 45.000 0.00 0.00 37.69 2.44
4586 14401 7.298122 CACAATACAAGTCAAACATACCTCAC 58.702 38.462 0.00 0.00 0.00 3.51
4636 14451 5.936686 ATCGTAGCATTGATGAAATCCTG 57.063 39.130 0.00 0.00 44.73 3.86
4637 14452 6.016777 GGAAATCGTAGCATTGATGAAATCCT 60.017 38.462 0.00 0.00 44.73 3.24
4693 14508 3.807622 GCTTCTACAACTGCACTGTGTTA 59.192 43.478 9.86 0.00 0.00 2.41
4697 14512 2.103094 TGAGCTTCTACAACTGCACTGT 59.897 45.455 2.44 2.44 0.00 3.55
4699 14514 2.103094 TGTGAGCTTCTACAACTGCACT 59.897 45.455 0.00 0.00 0.00 4.40
4702 14517 4.092091 GTGTATGTGAGCTTCTACAACTGC 59.908 45.833 3.94 0.00 0.00 4.40
4705 14520 7.492669 ACATATGTGTATGTGAGCTTCTACAAC 59.507 37.037 7.78 5.03 46.95 3.32
4730 14545 6.198591 GCGTGTGTTCATAAAGGAGAGTATAC 59.801 42.308 0.00 0.00 0.00 1.47
4733 14548 4.021807 TGCGTGTGTTCATAAAGGAGAGTA 60.022 41.667 0.00 0.00 0.00 2.59
4738 14553 2.546368 GTGTGCGTGTGTTCATAAAGGA 59.454 45.455 0.00 0.00 0.00 3.36
4749 14564 0.532573 AGAGATAGGGTGTGCGTGTG 59.467 55.000 0.00 0.00 0.00 3.82
4750 14565 2.139323 TAGAGATAGGGTGTGCGTGT 57.861 50.000 0.00 0.00 0.00 4.49
4752 14567 2.887783 CTCATAGAGATAGGGTGTGCGT 59.112 50.000 0.00 0.00 0.00 5.24
4759 14574 3.323115 TGCAAGTGCTCATAGAGATAGGG 59.677 47.826 4.69 0.00 42.66 3.53
4760 14575 4.558178 CTGCAAGTGCTCATAGAGATAGG 58.442 47.826 4.69 0.00 42.66 2.57
4766 14581 3.963374 AGTATCCTGCAAGTGCTCATAGA 59.037 43.478 4.69 0.00 42.66 1.98
4767 14582 4.305769 GAGTATCCTGCAAGTGCTCATAG 58.694 47.826 4.69 0.00 42.66 2.23
4775 14590 1.141881 CGCCGAGTATCCTGCAAGT 59.858 57.895 0.00 0.00 30.51 3.16
4779 14594 2.027751 GGACGCCGAGTATCCTGC 59.972 66.667 0.00 0.00 0.00 4.85
4782 14597 1.359475 GTCAGGACGCCGAGTATCC 59.641 63.158 0.00 0.00 0.00 2.59
4789 14604 0.457166 TCGTAAATGTCAGGACGCCG 60.457 55.000 0.00 0.00 35.33 6.46
4790 14605 1.659098 CTTCGTAAATGTCAGGACGCC 59.341 52.381 0.00 0.00 35.33 5.68
4793 14608 3.678548 GGTGACTTCGTAAATGTCAGGAC 59.321 47.826 0.00 0.00 40.73 3.85
4794 14609 3.322541 TGGTGACTTCGTAAATGTCAGGA 59.677 43.478 0.00 0.00 40.73 3.86
4795 14610 3.432252 GTGGTGACTTCGTAAATGTCAGG 59.568 47.826 0.00 0.00 40.73 3.86
4814 14638 1.883084 GATTACGAGGCGCCTGTGG 60.883 63.158 38.41 24.67 0.00 4.17
4817 14641 2.411701 TCGATTACGAGGCGCCTG 59.588 61.111 38.41 27.27 43.81 4.85
4838 14662 0.035439 TTTTGGCGGGAGGAGACATC 60.035 55.000 0.00 0.00 0.00 3.06
4840 14664 1.374947 CTTTTGGCGGGAGGAGACA 59.625 57.895 0.00 0.00 0.00 3.41
4841 14665 2.041115 GCTTTTGGCGGGAGGAGAC 61.041 63.158 0.00 0.00 0.00 3.36
4842 14666 2.351276 GCTTTTGGCGGGAGGAGA 59.649 61.111 0.00 0.00 0.00 3.71
4843 14667 2.751837 GGCTTTTGGCGGGAGGAG 60.752 66.667 0.00 0.00 42.94 3.69
4851 14675 3.244387 TGGGTTTATTTCAGGCTTTTGGC 60.244 43.478 0.00 0.00 46.43 4.52
4852 14676 4.563374 CCTGGGTTTATTTCAGGCTTTTGG 60.563 45.833 0.00 0.00 41.12 3.28
4854 14678 4.890158 CCTGGGTTTATTTCAGGCTTTT 57.110 40.909 0.00 0.00 41.12 2.27
4860 14700 7.466860 GCTCGTATTTACCTGGGTTTATTTCAG 60.467 40.741 0.00 0.00 0.00 3.02
4862 14702 6.510638 CGCTCGTATTTACCTGGGTTTATTTC 60.511 42.308 0.00 0.00 0.00 2.17
4870 14710 0.878961 GGCGCTCGTATTTACCTGGG 60.879 60.000 7.64 0.00 0.00 4.45
4871 14711 0.179094 TGGCGCTCGTATTTACCTGG 60.179 55.000 7.64 0.00 0.00 4.45
4872 14712 1.647346 TTGGCGCTCGTATTTACCTG 58.353 50.000 7.64 0.00 0.00 4.00
4875 14715 5.176958 ACTTGATATTGGCGCTCGTATTTAC 59.823 40.000 7.64 0.00 0.00 2.01
4876 14716 5.294356 ACTTGATATTGGCGCTCGTATTTA 58.706 37.500 7.64 0.00 0.00 1.40
4883 14723 3.005897 TCCTAGACTTGATATTGGCGCTC 59.994 47.826 7.64 0.00 0.00 5.03
4885 14725 3.060602 GTCCTAGACTTGATATTGGCGC 58.939 50.000 0.00 0.00 0.00 6.53
4887 14727 4.051922 CACGTCCTAGACTTGATATTGGC 58.948 47.826 0.00 0.00 34.40 4.52
4893 14733 4.523173 TGAAGTTCACGTCCTAGACTTGAT 59.477 41.667 0.08 0.00 39.78 2.57
4894 14734 3.887110 TGAAGTTCACGTCCTAGACTTGA 59.113 43.478 0.08 0.26 38.67 3.02
4900 14740 3.936372 TCCTTGAAGTTCACGTCCTAG 57.064 47.619 4.68 0.00 0.00 3.02
4901 14741 4.527038 AGATTCCTTGAAGTTCACGTCCTA 59.473 41.667 4.68 0.00 0.00 2.94
4902 14742 3.325135 AGATTCCTTGAAGTTCACGTCCT 59.675 43.478 4.68 0.00 0.00 3.85
4903 14743 3.665190 AGATTCCTTGAAGTTCACGTCC 58.335 45.455 4.68 0.00 0.00 4.79
4904 14744 5.120363 GGTTAGATTCCTTGAAGTTCACGTC 59.880 44.000 4.68 0.00 0.00 4.34
4906 14746 4.091509 CGGTTAGATTCCTTGAAGTTCACG 59.908 45.833 4.68 3.42 0.00 4.35
4908 14748 5.223449 ACGGTTAGATTCCTTGAAGTTCA 57.777 39.130 0.08 0.08 0.00 3.18
4910 14750 4.576879 GGACGGTTAGATTCCTTGAAGTT 58.423 43.478 0.00 0.00 0.00 2.66
4911 14751 3.368116 CGGACGGTTAGATTCCTTGAAGT 60.368 47.826 0.00 0.00 0.00 3.01
4912 14752 3.119245 TCGGACGGTTAGATTCCTTGAAG 60.119 47.826 0.00 0.00 0.00 3.02
4914 14754 2.426024 CTCGGACGGTTAGATTCCTTGA 59.574 50.000 0.00 0.00 0.00 3.02
4915 14755 2.810650 CTCGGACGGTTAGATTCCTTG 58.189 52.381 0.00 0.00 0.00 3.61
4916 14756 1.136500 GCTCGGACGGTTAGATTCCTT 59.864 52.381 0.00 0.00 0.00 3.36
4917 14757 0.745468 GCTCGGACGGTTAGATTCCT 59.255 55.000 0.00 0.00 0.00 3.36
4918 14758 0.745468 AGCTCGGACGGTTAGATTCC 59.255 55.000 0.00 0.00 0.00 3.01
4919 14759 2.357009 TGTAGCTCGGACGGTTAGATTC 59.643 50.000 0.00 0.00 0.00 2.52
4922 14777 1.089920 GTGTAGCTCGGACGGTTAGA 58.910 55.000 0.00 0.00 0.00 2.10
4940 14795 4.408921 TGGGAATCATAATCCGAACTGAGT 59.591 41.667 0.00 0.00 37.87 3.41
4944 14799 5.010012 GCAAATGGGAATCATAATCCGAACT 59.990 40.000 0.00 0.00 37.87 3.01
4946 14801 4.892345 TGCAAATGGGAATCATAATCCGAA 59.108 37.500 0.00 0.00 37.87 4.30
4950 14805 6.703165 GGTTCTTGCAAATGGGAATCATAATC 59.297 38.462 0.00 0.00 34.44 1.75
4952 14807 5.721000 AGGTTCTTGCAAATGGGAATCATAA 59.279 36.000 10.87 0.00 34.44 1.90
4954 14809 4.081309 CAGGTTCTTGCAAATGGGAATCAT 60.081 41.667 10.87 0.00 37.79 2.45
4960 14815 1.273327 GTCCAGGTTCTTGCAAATGGG 59.727 52.381 0.00 0.00 0.00 4.00
4962 14817 1.273327 GGGTCCAGGTTCTTGCAAATG 59.727 52.381 0.00 0.00 0.00 2.32
4964 14819 0.555769 AGGGTCCAGGTTCTTGCAAA 59.444 50.000 0.00 0.00 0.00 3.68
4965 14820 1.440618 TAGGGTCCAGGTTCTTGCAA 58.559 50.000 0.00 0.00 0.00 4.08
4968 14823 2.171448 CTCCATAGGGTCCAGGTTCTTG 59.829 54.545 0.00 0.00 34.93 3.02
4969 14824 2.482494 CTCCATAGGGTCCAGGTTCTT 58.518 52.381 0.00 0.00 34.93 2.52
4970 14825 1.972207 GCTCCATAGGGTCCAGGTTCT 60.972 57.143 0.00 0.00 34.93 3.01
4971 14826 0.470341 GCTCCATAGGGTCCAGGTTC 59.530 60.000 0.00 0.00 34.93 3.62
4972 14827 0.988678 GGCTCCATAGGGTCCAGGTT 60.989 60.000 0.00 0.00 34.93 3.50
4973 14828 1.384643 GGCTCCATAGGGTCCAGGT 60.385 63.158 0.00 0.00 34.93 4.00
4974 14829 2.511452 CGGCTCCATAGGGTCCAGG 61.511 68.421 7.90 0.00 34.93 4.45
4977 14832 1.760875 TGTCGGCTCCATAGGGTCC 60.761 63.158 0.00 0.00 34.93 4.46
4978 14833 1.442148 GTGTCGGCTCCATAGGGTC 59.558 63.158 0.00 0.00 34.93 4.46
4980 14835 2.417516 CGTGTCGGCTCCATAGGG 59.582 66.667 0.00 0.00 0.00 3.53
4981 14836 2.417516 CCGTGTCGGCTCCATAGG 59.582 66.667 0.00 0.00 41.17 2.57
4982 14837 2.417516 CCCGTGTCGGCTCCATAG 59.582 66.667 2.41 0.00 46.86 2.23
4983 14838 3.845259 GCCCGTGTCGGCTCCATA 61.845 66.667 2.41 0.00 46.86 2.74
4992 14847 1.873698 TTTTAGTCAGTGCCCGTGTC 58.126 50.000 0.00 0.00 0.00 3.67
5010 14865 3.268023 TGTTTGGATTTGGCGGTTTTT 57.732 38.095 0.00 0.00 0.00 1.94
5011 14866 2.990066 TGTTTGGATTTGGCGGTTTT 57.010 40.000 0.00 0.00 0.00 2.43
5012 14867 3.483808 AATGTTTGGATTTGGCGGTTT 57.516 38.095 0.00 0.00 0.00 3.27
5013 14868 3.483808 AAATGTTTGGATTTGGCGGTT 57.516 38.095 0.00 0.00 0.00 4.44
5014 14869 3.483808 AAAATGTTTGGATTTGGCGGT 57.516 38.095 0.00 0.00 0.00 5.68
5015 14870 4.144534 CAAAAATGTTTGGATTTGGCGG 57.855 40.909 0.00 0.00 40.47 6.13
5050 14905 6.807789 ACGAAATTTTAGGCACTGGTAAAAA 58.192 32.000 0.00 0.00 41.52 1.94
5072 14927 1.663643 ACACATATTTGCCGCACTACG 59.336 47.619 0.00 0.00 43.15 3.51
5073 14928 3.757745 AACACATATTTGCCGCACTAC 57.242 42.857 0.00 0.00 0.00 2.73
5074 14929 3.753797 TGAAACACATATTTGCCGCACTA 59.246 39.130 0.00 0.00 0.00 2.74
5075 14930 2.556189 TGAAACACATATTTGCCGCACT 59.444 40.909 0.00 0.00 0.00 4.40
5076 14931 2.940147 TGAAACACATATTTGCCGCAC 58.060 42.857 0.00 0.00 0.00 5.34
5077 14932 3.650070 TTGAAACACATATTTGCCGCA 57.350 38.095 0.00 0.00 0.00 5.69
5144 14999 9.631452 CATTCCTCTTCCACTTTTTCTATTTTC 57.369 33.333 0.00 0.00 0.00 2.29
5149 15004 8.533569 AAAACATTCCTCTTCCACTTTTTCTA 57.466 30.769 0.00 0.00 0.00 2.10
5172 15027 4.927049 AGATGGAGAAGCTCATGGAAAAA 58.073 39.130 0.00 0.00 31.08 1.94
5173 15028 4.581309 AGATGGAGAAGCTCATGGAAAA 57.419 40.909 0.00 0.00 31.08 2.29
5174 15029 4.581309 AAGATGGAGAAGCTCATGGAAA 57.419 40.909 0.00 0.00 31.08 3.13
5175 15030 4.226846 AGAAAGATGGAGAAGCTCATGGAA 59.773 41.667 0.00 0.00 31.08 3.53
5176 15031 3.779183 AGAAAGATGGAGAAGCTCATGGA 59.221 43.478 0.00 0.00 31.08 3.41
5177 15032 4.153673 AGAAAGATGGAGAAGCTCATGG 57.846 45.455 0.00 0.00 31.08 3.66
5178 15033 5.881443 AGAAAGAAAGATGGAGAAGCTCATG 59.119 40.000 0.00 0.00 31.08 3.07
5179 15034 6.064735 AGAAAGAAAGATGGAGAAGCTCAT 57.935 37.500 0.00 0.00 31.08 2.90
5180 15035 5.495926 AGAAAGAAAGATGGAGAAGCTCA 57.504 39.130 0.00 0.00 31.08 4.26
5181 15036 6.654582 AGAAAGAAAGAAAGATGGAGAAGCTC 59.345 38.462 0.00 0.00 0.00 4.09
5182 15037 6.541907 AGAAAGAAAGAAAGATGGAGAAGCT 58.458 36.000 0.00 0.00 0.00 3.74
5183 15038 6.816134 AGAAAGAAAGAAAGATGGAGAAGC 57.184 37.500 0.00 0.00 0.00 3.86
5184 15039 7.094420 GGGAAGAAAGAAAGAAAGATGGAGAAG 60.094 40.741 0.00 0.00 0.00 2.85
5185 15040 6.717084 GGGAAGAAAGAAAGAAAGATGGAGAA 59.283 38.462 0.00 0.00 0.00 2.87
5186 15041 6.241645 GGGAAGAAAGAAAGAAAGATGGAGA 58.758 40.000 0.00 0.00 0.00 3.71
5187 15042 5.123027 CGGGAAGAAAGAAAGAAAGATGGAG 59.877 44.000 0.00 0.00 0.00 3.86
5188 15043 5.003804 CGGGAAGAAAGAAAGAAAGATGGA 58.996 41.667 0.00 0.00 0.00 3.41
5189 15044 5.003804 TCGGGAAGAAAGAAAGAAAGATGG 58.996 41.667 0.00 0.00 0.00 3.51
5190 15045 5.123027 CCTCGGGAAGAAAGAAAGAAAGATG 59.877 44.000 0.00 0.00 0.00 2.90
5191 15046 5.013183 TCCTCGGGAAGAAAGAAAGAAAGAT 59.987 40.000 0.00 0.00 0.00 2.40
5192 15047 4.347000 TCCTCGGGAAGAAAGAAAGAAAGA 59.653 41.667 0.00 0.00 0.00 2.52
5193 15048 4.452795 GTCCTCGGGAAGAAAGAAAGAAAG 59.547 45.833 0.00 0.00 31.38 2.62
5194 15049 4.141574 TGTCCTCGGGAAGAAAGAAAGAAA 60.142 41.667 0.00 0.00 31.38 2.52
5195 15050 3.389983 TGTCCTCGGGAAGAAAGAAAGAA 59.610 43.478 0.00 0.00 31.38 2.52
5196 15051 2.969950 TGTCCTCGGGAAGAAAGAAAGA 59.030 45.455 0.00 0.00 31.38 2.52
5197 15052 3.330267 CTGTCCTCGGGAAGAAAGAAAG 58.670 50.000 0.00 0.00 31.38 2.62
5198 15053 2.038557 CCTGTCCTCGGGAAGAAAGAAA 59.961 50.000 0.00 0.00 42.46 2.52
5199 15054 1.623811 CCTGTCCTCGGGAAGAAAGAA 59.376 52.381 0.00 0.00 42.46 2.52
5200 15055 1.267121 CCTGTCCTCGGGAAGAAAGA 58.733 55.000 0.00 0.00 42.46 2.52
5201 15056 0.977395 ACCTGTCCTCGGGAAGAAAG 59.023 55.000 0.00 0.00 42.46 2.62
5202 15057 0.974383 GACCTGTCCTCGGGAAGAAA 59.026 55.000 0.00 0.00 42.46 2.52
5203 15058 0.114560 AGACCTGTCCTCGGGAAGAA 59.885 55.000 0.00 0.00 42.46 2.52
5204 15059 0.612174 CAGACCTGTCCTCGGGAAGA 60.612 60.000 0.00 0.00 42.46 2.87
5205 15060 0.612174 TCAGACCTGTCCTCGGGAAG 60.612 60.000 0.00 0.00 42.46 3.46
5206 15061 0.898789 GTCAGACCTGTCCTCGGGAA 60.899 60.000 0.00 0.00 42.46 3.97
5207 15062 1.304217 GTCAGACCTGTCCTCGGGA 60.304 63.158 0.00 0.00 42.46 5.14
5208 15063 2.352032 GGTCAGACCTGTCCTCGGG 61.352 68.421 12.94 0.00 45.17 5.14
5209 15064 2.701780 CGGTCAGACCTGTCCTCGG 61.702 68.421 17.95 0.00 36.78 4.63
5210 15065 1.649390 CTCGGTCAGACCTGTCCTCG 61.649 65.000 17.95 2.50 36.78 4.63
5211 15066 1.939769 GCTCGGTCAGACCTGTCCTC 61.940 65.000 17.95 0.00 36.78 3.71
5212 15067 1.979693 GCTCGGTCAGACCTGTCCT 60.980 63.158 17.95 0.00 36.78 3.85
5213 15068 2.574399 GCTCGGTCAGACCTGTCC 59.426 66.667 17.95 3.67 35.66 4.02
5214 15069 2.574399 GGCTCGGTCAGACCTGTC 59.426 66.667 17.95 8.07 35.66 3.51
5215 15070 3.374402 CGGCTCGGTCAGACCTGT 61.374 66.667 17.95 0.00 35.66 4.00
5216 15071 1.101635 TATCGGCTCGGTCAGACCTG 61.102 60.000 17.95 11.06 35.66 4.00
5217 15072 0.820074 CTATCGGCTCGGTCAGACCT 60.820 60.000 17.95 0.00 35.66 3.85
5218 15073 0.818445 TCTATCGGCTCGGTCAGACC 60.818 60.000 9.92 9.92 34.05 3.85
5219 15074 1.198178 GATCTATCGGCTCGGTCAGAC 59.802 57.143 0.00 0.00 0.00 3.51
5220 15075 1.072489 AGATCTATCGGCTCGGTCAGA 59.928 52.381 0.00 0.00 0.00 3.27
5221 15076 1.466950 GAGATCTATCGGCTCGGTCAG 59.533 57.143 0.00 0.00 0.00 3.51
5222 15077 1.524848 GAGATCTATCGGCTCGGTCA 58.475 55.000 0.00 0.00 0.00 4.02
5223 15078 0.444651 CGAGATCTATCGGCTCGGTC 59.555 60.000 0.00 0.00 45.54 4.79
5224 15079 2.545875 CGAGATCTATCGGCTCGGT 58.454 57.895 0.00 0.00 45.54 4.69
5231 15086 1.091537 GGGAGAGCCGAGATCTATCG 58.908 60.000 0.00 0.00 42.36 2.92
5232 15087 1.005450 AGGGGAGAGCCGAGATCTATC 59.995 57.143 0.00 0.00 33.83 2.08
5233 15088 1.005450 GAGGGGAGAGCCGAGATCTAT 59.995 57.143 0.00 0.00 33.83 1.98
5234 15089 0.402504 GAGGGGAGAGCCGAGATCTA 59.597 60.000 0.00 0.00 33.83 1.98
5235 15090 1.152830 GAGGGGAGAGCCGAGATCT 59.847 63.158 0.00 0.00 33.83 2.75
5236 15091 1.152830 AGAGGGGAGAGCCGAGATC 59.847 63.158 0.00 0.00 33.83 2.75
5237 15092 1.152567 CAGAGGGGAGAGCCGAGAT 60.153 63.158 0.00 0.00 33.83 2.75
5238 15093 2.277072 CAGAGGGGAGAGCCGAGA 59.723 66.667 0.00 0.00 33.83 4.04
5239 15094 2.124693 GTCAGAGGGGAGAGCCGAG 61.125 68.421 0.00 0.00 33.83 4.63
5240 15095 2.043852 GTCAGAGGGGAGAGCCGA 60.044 66.667 0.00 0.00 33.83 5.54
5241 15096 3.522731 CGTCAGAGGGGAGAGCCG 61.523 72.222 0.00 0.00 33.83 5.52
5242 15097 3.151022 CCGTCAGAGGGGAGAGCC 61.151 72.222 0.63 0.00 0.00 4.70
5243 15098 3.844090 GCCGTCAGAGGGGAGAGC 61.844 72.222 11.22 0.00 0.00 4.09
5244 15099 3.522731 CGCCGTCAGAGGGGAGAG 61.523 72.222 11.22 0.00 45.92 3.20
5245 15100 4.043100 TCGCCGTCAGAGGGGAGA 62.043 66.667 11.22 0.70 46.44 3.71
5251 15106 3.402691 ATCTGCGTCGCCGTCAGAG 62.403 63.158 15.88 4.08 44.38 3.35
5252 15107 3.396911 GATCTGCGTCGCCGTCAGA 62.397 63.158 15.88 13.51 44.84 3.27
5253 15108 2.951745 GATCTGCGTCGCCGTCAG 60.952 66.667 15.88 5.29 38.62 3.51
5254 15109 4.492160 GGATCTGCGTCGCCGTCA 62.492 66.667 15.88 0.00 36.15 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.