Multiple sequence alignment - TraesCS3D01G007500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G007500 chr3D 100.000 4773 0 0 1 4773 2604119 2599347 0.000000e+00 8815
1 TraesCS3D01G007500 chr3D 95.270 296 11 2 1 293 237744735 237744440 2.600000e-127 466
2 TraesCS3D01G007500 chrUn 91.400 1779 93 19 2189 3944 32219476 32221217 0.000000e+00 2383
3 TraesCS3D01G007500 chrUn 90.743 713 38 18 1000 1704 32218112 32218804 0.000000e+00 926
4 TraesCS3D01G007500 chrUn 88.514 444 35 12 1707 2142 32218936 32219371 1.520000e-144 523
5 TraesCS3D01G007500 chrUn 90.865 208 17 2 4329 4536 32221365 32221570 1.310000e-70 278
6 TraesCS3D01G007500 chrUn 93.548 124 7 1 4651 4773 32221890 32222013 2.930000e-42 183
7 TraesCS3D01G007500 chrUn 86.408 103 13 1 4564 4665 33650518 33650416 1.400000e-20 111
8 TraesCS3D01G007500 chrUn 86.408 103 13 1 4564 4665 184780015 184779913 1.400000e-20 111
9 TraesCS3D01G007500 chr3B 88.429 1184 73 36 563 1705 3268415 3269575 0.000000e+00 1369
10 TraesCS3D01G007500 chr3B 87.457 1156 81 31 3664 4773 3271525 3272662 0.000000e+00 1273
11 TraesCS3D01G007500 chr3B 86.224 980 96 24 2479 3445 3270434 3271387 0.000000e+00 1026
12 TraesCS3D01G007500 chr3B 87.226 501 39 15 1707 2190 3269674 3270166 9.030000e-152 547
13 TraesCS3D01G007500 chr3B 94.595 296 10 5 3 293 224894529 224894823 2.030000e-123 453
14 TraesCS3D01G007500 chr3B 86.742 264 22 9 330 585 3267019 3267277 1.010000e-71 281
15 TraesCS3D01G007500 chr3B 87.805 246 23 2 330 572 3267872 3268113 1.010000e-71 281
16 TraesCS3D01G007500 chr3B 83.000 300 19 13 631 926 3267275 3267546 4.770000e-60 243
17 TraesCS3D01G007500 chr3B 85.068 221 29 4 2187 2406 3270222 3270439 6.220000e-54 222
18 TraesCS3D01G007500 chr3B 94.690 113 4 2 4329 4439 659273689 659273801 1.770000e-39 174
19 TraesCS3D01G007500 chr1B 90.156 640 40 15 1074 1704 20054128 20054753 0.000000e+00 811
20 TraesCS3D01G007500 chr1B 88.341 446 31 15 1707 2142 20054867 20055301 2.550000e-142 516
21 TraesCS3D01G007500 chr1B 88.272 324 26 8 1386 1704 62849863 62849547 1.250000e-100 377
22 TraesCS3D01G007500 chr1B 89.076 119 11 2 4320 4437 551040391 551040508 3.850000e-31 147
23 TraesCS3D01G007500 chr6B 88.539 445 32 12 1707 2142 506169106 506169540 5.470000e-144 521
24 TraesCS3D01G007500 chr6B 88.788 330 25 8 1380 1704 506168670 506168992 1.250000e-105 394
25 TraesCS3D01G007500 chr6B 89.198 324 23 8 1386 1704 583138077 583137761 1.250000e-105 394
26 TraesCS3D01G007500 chr6B 88.485 330 26 8 1380 1704 42693328 42693650 5.790000e-104 388
27 TraesCS3D01G007500 chr6D 94.631 298 9 5 1 293 270331573 270331868 5.630000e-124 455
28 TraesCS3D01G007500 chr6A 94.881 293 11 3 3 293 215310005 215309715 5.630000e-124 455
29 TraesCS3D01G007500 chr6A 94.881 293 11 2 3 293 514257086 514256796 5.630000e-124 455
30 TraesCS3D01G007500 chr6A 90.805 87 8 0 4579 4665 444687751 444687837 3.020000e-22 117
31 TraesCS3D01G007500 chr5D 94.576 295 12 3 1 293 50020712 50021004 2.030000e-123 453
32 TraesCS3D01G007500 chr5D 96.842 95 3 0 4342 4436 302870207 302870301 4.940000e-35 159
33 TraesCS3D01G007500 chr2D 94.576 295 12 3 1 293 588458368 588458076 2.030000e-123 453
34 TraesCS3D01G007500 chr2D 83.707 491 43 23 971 1456 645832243 645831785 3.410000e-116 429
35 TraesCS3D01G007500 chr2D 89.441 322 32 2 2661 2981 645829471 645829151 5.750000e-109 405
36 TraesCS3D01G007500 chr2D 84.665 313 28 7 1845 2145 645831137 645830833 1.300000e-75 294
37 TraesCS3D01G007500 chr2D 86.792 159 17 3 2299 2457 645830348 645830194 1.770000e-39 174
38 TraesCS3D01G007500 chr2D 88.235 102 7 2 4566 4665 7947913 7948011 3.020000e-22 117
39 TraesCS3D01G007500 chr4D 94.295 298 11 3 1 293 132275669 132275965 7.280000e-123 451
40 TraesCS3D01G007500 chr1D 94.576 295 11 4 1 293 303369250 303368959 7.280000e-123 451
41 TraesCS3D01G007500 chr1D 88.983 118 11 2 4320 4437 409318445 409318560 1.380000e-30 145
42 TraesCS3D01G007500 chr2A 83.226 465 63 11 995 1455 771515813 771515360 3.440000e-111 412
43 TraesCS3D01G007500 chr2A 84.790 309 28 8 1845 2142 771514549 771514249 4.670000e-75 292
44 TraesCS3D01G007500 chr2A 79.592 392 54 19 2187 2572 771514011 771513640 1.700000e-64 257
45 TraesCS3D01G007500 chr2B 82.390 477 57 19 992 1456 789683235 789683696 1.610000e-104 390
46 TraesCS3D01G007500 chr2B 88.580 324 25 7 1386 1704 19186946 19186630 2.700000e-102 383
47 TraesCS3D01G007500 chr2B 94.515 237 13 0 1906 2142 19186383 19186147 2.710000e-97 366
48 TraesCS3D01G007500 chr2B 85.484 310 25 7 1845 2142 789684360 789684661 6.000000e-79 305
49 TraesCS3D01G007500 chr3A 88.485 330 25 8 1380 1704 54218909 54219230 2.080000e-103 387
50 TraesCS3D01G007500 chr3A 96.939 98 2 1 4343 4439 638444537 638444634 3.820000e-36 163
51 TraesCS3D01G007500 chr3A 86.408 103 13 1 4564 4665 747828558 747828456 1.400000e-20 111
52 TraesCS3D01G007500 chr3A 86.408 103 13 1 4564 4665 747833303 747833201 1.400000e-20 111
53 TraesCS3D01G007500 chr3A 86.408 103 13 1 4564 4665 747867187 747867085 1.400000e-20 111
54 TraesCS3D01G007500 chr5B 97.938 97 2 0 4342 4438 347666092 347666188 8.210000e-38 169
55 TraesCS3D01G007500 chr5A 97.938 97 2 0 4342 4438 395077930 395077834 8.210000e-38 169
56 TraesCS3D01G007500 chr7A 87.379 103 12 1 4564 4665 13920372 13920474 3.020000e-22 117


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G007500 chr3D 2599347 2604119 4772 True 8815.000000 8815 100.000000 1 4773 1 chr3D.!!$R1 4772
1 TraesCS3D01G007500 chrUn 32218112 32222013 3901 False 858.600000 2383 91.014000 1000 4773 5 chrUn.!!$F1 3773
2 TraesCS3D01G007500 chr3B 3267019 3272662 5643 False 655.250000 1369 86.493875 330 4773 8 chr3B.!!$F3 4443
3 TraesCS3D01G007500 chr1B 20054128 20055301 1173 False 663.500000 811 89.248500 1074 2142 2 chr1B.!!$F2 1068
4 TraesCS3D01G007500 chr6B 506168670 506169540 870 False 457.500000 521 88.663500 1380 2142 2 chr6B.!!$F2 762
5 TraesCS3D01G007500 chr2D 645829151 645832243 3092 True 325.500000 429 86.151250 971 2981 4 chr2D.!!$R2 2010
6 TraesCS3D01G007500 chr2A 771513640 771515813 2173 True 320.333333 412 82.536000 995 2572 3 chr2A.!!$R1 1577
7 TraesCS3D01G007500 chr2B 19186147 19186946 799 True 374.500000 383 91.547500 1386 2142 2 chr2B.!!$R1 756
8 TraesCS3D01G007500 chr2B 789683235 789684661 1426 False 347.500000 390 83.937000 992 2142 2 chr2B.!!$F1 1150

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
949 2132 0.391661 CCAACTCCACCGACAGGATG 60.392 60.0 0.00 0.00 46.00 3.51 F
1271 2471 0.107165 TGAGCTCCGAGTGCTAGCTA 60.107 55.0 17.23 0.00 46.29 3.32 F
1273 2473 0.181587 AGCTCCGAGTGCTAGCTAGA 59.818 55.0 25.15 6.86 44.55 2.43 F
1274 2474 0.309612 GCTCCGAGTGCTAGCTAGAC 59.690 60.0 25.15 17.80 33.40 2.59 F
2167 3887 0.404040 GACATTTCAGACCACCCCCA 59.596 55.0 0.00 0.00 0.00 4.96 F
3518 6180 0.164647 GCTACTTTGTGTCTGCTGCG 59.835 55.0 0.00 0.00 0.00 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1995 3693 0.813184 AGAATGCACCTGGAAATGCG 59.187 50.000 0.00 0.00 45.13 4.73 R
3207 5852 0.440371 GAGTCGCACACTAAAGCAGC 59.560 55.000 0.00 0.00 34.41 5.25 R
3209 5854 1.068588 ACAGAGTCGCACACTAAAGCA 59.931 47.619 0.00 0.00 34.41 3.91 R
3272 5918 1.078708 GTAGCTAGCGGGTTTGCCA 60.079 57.895 9.55 0.00 36.17 4.92 R
3762 6430 0.608640 CGGGTTGGTCTACTTCTGCT 59.391 55.000 0.00 0.00 0.00 4.24 R
4489 7214 1.311403 CTAGAGCAGTCCCAGGGGA 59.689 63.158 5.33 2.02 42.90 4.81 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.704991 CGACATTACATTCATGTTTACACAC 57.295 36.000 0.00 0.00 41.97 3.82
25 26 7.518161 CGACATTACATTCATGTTTACACACT 58.482 34.615 0.00 0.00 41.97 3.55
26 27 7.688167 CGACATTACATTCATGTTTACACACTC 59.312 37.037 0.00 0.00 41.97 3.51
27 28 8.389779 ACATTACATTCATGTTTACACACTCA 57.610 30.769 0.00 0.00 41.97 3.41
28 29 9.013229 ACATTACATTCATGTTTACACACTCAT 57.987 29.630 0.00 0.00 41.97 2.90
29 30 9.844790 CATTACATTCATGTTTACACACTCATT 57.155 29.630 0.00 0.00 41.97 2.57
31 32 7.750229 ACATTCATGTTTACACACTCATTCT 57.250 32.000 0.00 0.00 37.90 2.40
32 33 8.846943 ACATTCATGTTTACACACTCATTCTA 57.153 30.769 0.00 0.00 37.90 2.10
33 34 8.939929 ACATTCATGTTTACACACTCATTCTAG 58.060 33.333 0.00 0.00 37.90 2.43
34 35 8.939929 CATTCATGTTTACACACTCATTCTAGT 58.060 33.333 0.00 0.00 35.03 2.57
35 36 8.902540 TTCATGTTTACACACTCATTCTAGTT 57.097 30.769 0.00 0.00 35.03 2.24
36 37 8.310406 TCATGTTTACACACTCATTCTAGTTG 57.690 34.615 0.00 0.00 35.03 3.16
37 38 7.931407 TCATGTTTACACACTCATTCTAGTTGT 59.069 33.333 0.00 0.00 35.03 3.32
38 39 7.709269 TGTTTACACACTCATTCTAGTTGTC 57.291 36.000 0.00 0.00 0.00 3.18
39 40 6.419710 TGTTTACACACTCATTCTAGTTGTCG 59.580 38.462 0.00 0.00 0.00 4.35
40 41 3.914312 ACACACTCATTCTAGTTGTCGG 58.086 45.455 0.00 0.00 0.00 4.79
41 42 3.321111 ACACACTCATTCTAGTTGTCGGT 59.679 43.478 0.00 0.00 0.00 4.69
42 43 3.675225 CACACTCATTCTAGTTGTCGGTG 59.325 47.826 0.00 0.00 0.00 4.94
43 44 2.668457 CACTCATTCTAGTTGTCGGTGC 59.332 50.000 0.00 0.00 0.00 5.01
44 45 2.563179 ACTCATTCTAGTTGTCGGTGCT 59.437 45.455 0.00 0.00 0.00 4.40
45 46 3.182967 CTCATTCTAGTTGTCGGTGCTC 58.817 50.000 0.00 0.00 0.00 4.26
46 47 2.560981 TCATTCTAGTTGTCGGTGCTCA 59.439 45.455 0.00 0.00 0.00 4.26
47 48 3.195610 TCATTCTAGTTGTCGGTGCTCAT 59.804 43.478 0.00 0.00 0.00 2.90
48 49 4.401202 TCATTCTAGTTGTCGGTGCTCATA 59.599 41.667 0.00 0.00 0.00 2.15
49 50 3.777465 TCTAGTTGTCGGTGCTCATAC 57.223 47.619 0.00 0.00 0.00 2.39
50 51 3.353557 TCTAGTTGTCGGTGCTCATACT 58.646 45.455 0.00 0.00 0.00 2.12
51 52 3.762288 TCTAGTTGTCGGTGCTCATACTT 59.238 43.478 0.00 0.00 0.00 2.24
52 53 3.402628 AGTTGTCGGTGCTCATACTTT 57.597 42.857 0.00 0.00 0.00 2.66
53 54 3.740115 AGTTGTCGGTGCTCATACTTTT 58.260 40.909 0.00 0.00 0.00 2.27
54 55 4.134563 AGTTGTCGGTGCTCATACTTTTT 58.865 39.130 0.00 0.00 0.00 1.94
55 56 4.213482 AGTTGTCGGTGCTCATACTTTTTC 59.787 41.667 0.00 0.00 0.00 2.29
56 57 3.734463 TGTCGGTGCTCATACTTTTTCA 58.266 40.909 0.00 0.00 0.00 2.69
57 58 4.323417 TGTCGGTGCTCATACTTTTTCAT 58.677 39.130 0.00 0.00 0.00 2.57
58 59 4.759693 TGTCGGTGCTCATACTTTTTCATT 59.240 37.500 0.00 0.00 0.00 2.57
59 60 5.088739 GTCGGTGCTCATACTTTTTCATTG 58.911 41.667 0.00 0.00 0.00 2.82
60 61 4.759693 TCGGTGCTCATACTTTTTCATTGT 59.240 37.500 0.00 0.00 0.00 2.71
61 62 5.935206 TCGGTGCTCATACTTTTTCATTGTA 59.065 36.000 0.00 0.00 0.00 2.41
62 63 6.021596 CGGTGCTCATACTTTTTCATTGTAC 58.978 40.000 0.00 0.00 0.00 2.90
63 64 6.322491 GGTGCTCATACTTTTTCATTGTACC 58.678 40.000 0.00 0.00 0.00 3.34
64 65 6.072175 GGTGCTCATACTTTTTCATTGTACCA 60.072 38.462 0.00 0.00 0.00 3.25
65 66 7.362920 GGTGCTCATACTTTTTCATTGTACCAT 60.363 37.037 0.00 0.00 0.00 3.55
66 67 7.698130 GTGCTCATACTTTTTCATTGTACCATC 59.302 37.037 0.00 0.00 0.00 3.51
67 68 7.148086 TGCTCATACTTTTTCATTGTACCATCC 60.148 37.037 0.00 0.00 0.00 3.51
68 69 7.148086 GCTCATACTTTTTCATTGTACCATCCA 60.148 37.037 0.00 0.00 0.00 3.41
69 70 8.821686 TCATACTTTTTCATTGTACCATCCAT 57.178 30.769 0.00 0.00 0.00 3.41
70 71 8.685427 TCATACTTTTTCATTGTACCATCCATG 58.315 33.333 0.00 0.00 0.00 3.66
71 72 5.723295 ACTTTTTCATTGTACCATCCATGC 58.277 37.500 0.00 0.00 0.00 4.06
72 73 5.481473 ACTTTTTCATTGTACCATCCATGCT 59.519 36.000 0.00 0.00 0.00 3.79
73 74 6.663093 ACTTTTTCATTGTACCATCCATGCTA 59.337 34.615 0.00 0.00 0.00 3.49
74 75 6.698008 TTTTCATTGTACCATCCATGCTAG 57.302 37.500 0.00 0.00 0.00 3.42
75 76 5.372343 TTCATTGTACCATCCATGCTAGT 57.628 39.130 0.00 0.00 0.00 2.57
76 77 5.372343 TCATTGTACCATCCATGCTAGTT 57.628 39.130 0.00 0.00 0.00 2.24
77 78 5.754782 TCATTGTACCATCCATGCTAGTTT 58.245 37.500 0.00 0.00 0.00 2.66
78 79 6.894682 TCATTGTACCATCCATGCTAGTTTA 58.105 36.000 0.00 0.00 0.00 2.01
79 80 7.517320 TCATTGTACCATCCATGCTAGTTTAT 58.483 34.615 0.00 0.00 0.00 1.40
80 81 7.998383 TCATTGTACCATCCATGCTAGTTTATT 59.002 33.333 0.00 0.00 0.00 1.40
81 82 8.632679 CATTGTACCATCCATGCTAGTTTATTT 58.367 33.333 0.00 0.00 0.00 1.40
82 83 8.588290 TTGTACCATCCATGCTAGTTTATTTT 57.412 30.769 0.00 0.00 0.00 1.82
83 84 8.220755 TGTACCATCCATGCTAGTTTATTTTC 57.779 34.615 0.00 0.00 0.00 2.29
84 85 8.052748 TGTACCATCCATGCTAGTTTATTTTCT 58.947 33.333 0.00 0.00 0.00 2.52
85 86 7.961326 ACCATCCATGCTAGTTTATTTTCTT 57.039 32.000 0.00 0.00 0.00 2.52
86 87 8.366359 ACCATCCATGCTAGTTTATTTTCTTT 57.634 30.769 0.00 0.00 0.00 2.52
87 88 8.815912 ACCATCCATGCTAGTTTATTTTCTTTT 58.184 29.630 0.00 0.00 0.00 2.27
106 107 9.974980 TTTCTTTTAAGTTTTCTTCTTGTGTGT 57.025 25.926 0.00 0.00 40.91 3.72
107 108 9.974980 TTCTTTTAAGTTTTCTTCTTGTGTGTT 57.025 25.926 0.00 0.00 40.91 3.32
108 109 9.974980 TCTTTTAAGTTTTCTTCTTGTGTGTTT 57.025 25.926 0.00 0.00 40.91 2.83
110 111 9.751542 TTTTAAGTTTTCTTCTTGTGTGTTTGA 57.248 25.926 0.00 0.00 40.91 2.69
111 112 9.751542 TTTAAGTTTTCTTCTTGTGTGTTTGAA 57.248 25.926 0.00 0.00 40.91 2.69
112 113 9.751542 TTAAGTTTTCTTCTTGTGTGTTTGAAA 57.248 25.926 0.00 0.00 40.91 2.69
113 114 8.655651 AAGTTTTCTTCTTGTGTGTTTGAAAA 57.344 26.923 0.00 0.00 34.76 2.29
114 115 8.655651 AGTTTTCTTCTTGTGTGTTTGAAAAA 57.344 26.923 0.00 0.00 34.95 1.94
115 116 8.547894 AGTTTTCTTCTTGTGTGTTTGAAAAAC 58.452 29.630 0.00 0.00 34.95 2.43
116 117 7.414814 TTTCTTCTTGTGTGTTTGAAAAACC 57.585 32.000 0.00 0.00 0.00 3.27
117 118 6.339587 TCTTCTTGTGTGTTTGAAAAACCT 57.660 33.333 0.00 0.00 0.00 3.50
118 119 6.754193 TCTTCTTGTGTGTTTGAAAAACCTT 58.246 32.000 0.00 0.00 0.00 3.50
119 120 7.887381 TCTTCTTGTGTGTTTGAAAAACCTTA 58.113 30.769 0.00 0.00 0.00 2.69
120 121 8.361139 TCTTCTTGTGTGTTTGAAAAACCTTAA 58.639 29.630 0.00 0.00 0.00 1.85
121 122 8.527567 TTCTTGTGTGTTTGAAAAACCTTAAG 57.472 30.769 0.00 0.00 0.00 1.85
122 123 7.887381 TCTTGTGTGTTTGAAAAACCTTAAGA 58.113 30.769 3.36 1.27 0.00 2.10
123 124 8.361139 TCTTGTGTGTTTGAAAAACCTTAAGAA 58.639 29.630 3.36 0.00 0.00 2.52
124 125 8.888579 TTGTGTGTTTGAAAAACCTTAAGAAA 57.111 26.923 3.36 0.00 0.00 2.52
125 126 8.888579 TGTGTGTTTGAAAAACCTTAAGAAAA 57.111 26.923 3.36 0.00 0.00 2.29
126 127 9.326413 TGTGTGTTTGAAAAACCTTAAGAAAAA 57.674 25.926 3.36 0.00 0.00 1.94
127 128 9.588774 GTGTGTTTGAAAAACCTTAAGAAAAAC 57.411 29.630 3.36 0.90 0.00 2.43
128 129 8.775527 TGTGTTTGAAAAACCTTAAGAAAAACC 58.224 29.630 3.36 0.00 0.00 3.27
129 130 7.953173 GTGTTTGAAAAACCTTAAGAAAAACCG 59.047 33.333 3.36 0.00 0.00 4.44
130 131 7.871463 TGTTTGAAAAACCTTAAGAAAAACCGA 59.129 29.630 3.36 0.00 0.00 4.69
131 132 8.710551 GTTTGAAAAACCTTAAGAAAAACCGAA 58.289 29.630 3.36 0.00 0.00 4.30
132 133 8.828688 TTGAAAAACCTTAAGAAAAACCGAAA 57.171 26.923 3.36 0.00 0.00 3.46
133 134 8.828688 TGAAAAACCTTAAGAAAAACCGAAAA 57.171 26.923 3.36 0.00 0.00 2.29
134 135 9.269453 TGAAAAACCTTAAGAAAAACCGAAAAA 57.731 25.926 3.36 0.00 0.00 1.94
171 172 7.240414 GCTTTTAGCTAGTCTAGTTTCCATG 57.760 40.000 8.68 0.00 38.45 3.66
172 173 6.238239 GCTTTTAGCTAGTCTAGTTTCCATGC 60.238 42.308 8.68 2.82 38.45 4.06
173 174 6.546428 TTTAGCTAGTCTAGTTTCCATGCT 57.454 37.500 8.68 0.63 0.00 3.79
174 175 6.546428 TTAGCTAGTCTAGTTTCCATGCTT 57.454 37.500 8.68 0.00 0.00 3.91
175 176 4.764172 AGCTAGTCTAGTTTCCATGCTTG 58.236 43.478 8.68 0.00 0.00 4.01
176 177 4.223923 AGCTAGTCTAGTTTCCATGCTTGT 59.776 41.667 8.68 0.00 0.00 3.16
177 178 5.422331 AGCTAGTCTAGTTTCCATGCTTGTA 59.578 40.000 8.68 0.00 0.00 2.41
178 179 5.751028 GCTAGTCTAGTTTCCATGCTTGTAG 59.249 44.000 8.68 0.00 0.00 2.74
179 180 5.746990 AGTCTAGTTTCCATGCTTGTAGT 57.253 39.130 0.00 0.00 0.00 2.73
180 181 6.852420 AGTCTAGTTTCCATGCTTGTAGTA 57.148 37.500 0.00 0.00 0.00 1.82
181 182 6.868622 AGTCTAGTTTCCATGCTTGTAGTAG 58.131 40.000 0.00 1.78 0.00 2.57
182 183 6.437793 AGTCTAGTTTCCATGCTTGTAGTAGT 59.562 38.462 0.00 0.00 0.00 2.73
183 184 7.614583 AGTCTAGTTTCCATGCTTGTAGTAGTA 59.385 37.037 0.00 0.00 0.00 1.82
184 185 8.248945 GTCTAGTTTCCATGCTTGTAGTAGTAA 58.751 37.037 0.00 0.00 0.00 2.24
185 186 8.978472 TCTAGTTTCCATGCTTGTAGTAGTAAT 58.022 33.333 0.00 0.00 0.00 1.89
186 187 9.601217 CTAGTTTCCATGCTTGTAGTAGTAATT 57.399 33.333 0.00 0.00 0.00 1.40
188 189 9.953565 AGTTTCCATGCTTGTAGTAGTAATTAA 57.046 29.630 0.00 0.00 0.00 1.40
212 213 7.770801 AAAGAAAACCCAAAAAGATTTCTCG 57.229 32.000 0.00 0.00 38.89 4.04
213 214 6.465439 AGAAAACCCAAAAAGATTTCTCGT 57.535 33.333 0.00 0.00 35.96 4.18
214 215 6.873997 AGAAAACCCAAAAAGATTTCTCGTT 58.126 32.000 0.00 0.00 35.96 3.85
215 216 6.978659 AGAAAACCCAAAAAGATTTCTCGTTC 59.021 34.615 0.00 0.00 35.96 3.95
216 217 6.465439 AAACCCAAAAAGATTTCTCGTTCT 57.535 33.333 0.00 0.00 0.00 3.01
217 218 6.465439 AACCCAAAAAGATTTCTCGTTCTT 57.535 33.333 0.00 0.00 33.69 2.52
218 219 6.465439 ACCCAAAAAGATTTCTCGTTCTTT 57.535 33.333 0.00 0.00 42.46 2.52
238 239 3.625649 TTTTTGCTTGTTGGGAGCTTT 57.374 38.095 0.00 0.00 40.75 3.51
239 240 2.888834 TTTGCTTGTTGGGAGCTTTC 57.111 45.000 0.00 0.00 40.75 2.62
240 241 1.039856 TTGCTTGTTGGGAGCTTTCC 58.960 50.000 0.00 0.00 40.75 3.13
248 249 3.637184 GGGAGCTTTCCCGTGTAAA 57.363 52.632 0.00 0.00 40.59 2.01
249 250 2.124277 GGGAGCTTTCCCGTGTAAAT 57.876 50.000 0.00 0.00 40.59 1.40
250 251 3.271055 GGGAGCTTTCCCGTGTAAATA 57.729 47.619 0.00 0.00 40.59 1.40
251 252 3.203716 GGGAGCTTTCCCGTGTAAATAG 58.796 50.000 0.00 0.00 40.59 1.73
252 253 3.370209 GGGAGCTTTCCCGTGTAAATAGT 60.370 47.826 0.00 0.00 40.59 2.12
253 254 4.259356 GGAGCTTTCCCGTGTAAATAGTT 58.741 43.478 0.00 0.00 0.00 2.24
254 255 4.698780 GGAGCTTTCCCGTGTAAATAGTTT 59.301 41.667 0.00 0.00 0.00 2.66
255 256 5.182570 GGAGCTTTCCCGTGTAAATAGTTTT 59.817 40.000 0.00 0.00 0.00 2.43
256 257 6.372381 GGAGCTTTCCCGTGTAAATAGTTTTA 59.628 38.462 0.00 0.00 0.00 1.52
257 258 7.066645 GGAGCTTTCCCGTGTAAATAGTTTTAT 59.933 37.037 0.00 0.00 30.34 1.40
258 259 8.344446 AGCTTTCCCGTGTAAATAGTTTTATT 57.656 30.769 0.00 0.00 30.34 1.40
259 260 8.799367 AGCTTTCCCGTGTAAATAGTTTTATTT 58.201 29.630 0.00 0.00 41.27 1.40
260 261 9.069078 GCTTTCCCGTGTAAATAGTTTTATTTC 57.931 33.333 0.00 0.00 39.55 2.17
278 279 8.972458 TTTATTTCTTTTCTTTTCTTTGGGGG 57.028 30.769 0.00 0.00 0.00 5.40
279 280 6.575244 ATTTCTTTTCTTTTCTTTGGGGGT 57.425 33.333 0.00 0.00 0.00 4.95
280 281 5.607939 TTCTTTTCTTTTCTTTGGGGGTC 57.392 39.130 0.00 0.00 0.00 4.46
281 282 4.615513 TCTTTTCTTTTCTTTGGGGGTCA 58.384 39.130 0.00 0.00 0.00 4.02
282 283 5.026790 TCTTTTCTTTTCTTTGGGGGTCAA 58.973 37.500 0.00 0.00 0.00 3.18
283 284 5.128663 TCTTTTCTTTTCTTTGGGGGTCAAG 59.871 40.000 0.00 0.00 36.62 3.02
284 285 3.963476 TCTTTTCTTTGGGGGTCAAGA 57.037 42.857 0.00 0.00 36.62 3.02
285 286 3.832527 TCTTTTCTTTGGGGGTCAAGAG 58.167 45.455 0.00 0.00 36.62 2.85
286 287 2.675658 TTTCTTTGGGGGTCAAGAGG 57.324 50.000 0.00 0.00 36.62 3.69
287 288 1.827792 TTCTTTGGGGGTCAAGAGGA 58.172 50.000 0.00 0.00 36.62 3.71
288 289 1.362224 TCTTTGGGGGTCAAGAGGAG 58.638 55.000 0.00 0.00 36.62 3.69
289 290 1.132527 TCTTTGGGGGTCAAGAGGAGA 60.133 52.381 0.00 0.00 36.62 3.71
290 291 1.705186 CTTTGGGGGTCAAGAGGAGAA 59.295 52.381 0.00 0.00 36.62 2.87
291 292 1.362224 TTGGGGGTCAAGAGGAGAAG 58.638 55.000 0.00 0.00 0.00 2.85
292 293 0.491823 TGGGGGTCAAGAGGAGAAGA 59.508 55.000 0.00 0.00 0.00 2.87
293 294 1.132527 TGGGGGTCAAGAGGAGAAGAA 60.133 52.381 0.00 0.00 0.00 2.52
294 295 1.557371 GGGGGTCAAGAGGAGAAGAAG 59.443 57.143 0.00 0.00 0.00 2.85
295 296 1.065782 GGGGTCAAGAGGAGAAGAAGC 60.066 57.143 0.00 0.00 0.00 3.86
296 297 1.905894 GGGTCAAGAGGAGAAGAAGCT 59.094 52.381 0.00 0.00 0.00 3.74
297 298 2.093711 GGGTCAAGAGGAGAAGAAGCTC 60.094 54.545 0.00 0.00 0.00 4.09
307 308 4.744795 GAGAAGAAGCTCCATAACCTGA 57.255 45.455 0.00 0.00 0.00 3.86
308 309 5.091261 GAGAAGAAGCTCCATAACCTGAA 57.909 43.478 0.00 0.00 0.00 3.02
309 310 5.491982 GAGAAGAAGCTCCATAACCTGAAA 58.508 41.667 0.00 0.00 0.00 2.69
310 311 5.880901 AGAAGAAGCTCCATAACCTGAAAA 58.119 37.500 0.00 0.00 0.00 2.29
311 312 5.942826 AGAAGAAGCTCCATAACCTGAAAAG 59.057 40.000 0.00 0.00 0.00 2.27
312 313 4.593956 AGAAGCTCCATAACCTGAAAAGG 58.406 43.478 0.00 0.00 0.00 3.11
313 314 4.289672 AGAAGCTCCATAACCTGAAAAGGA 59.710 41.667 0.00 0.00 0.00 3.36
314 315 4.657814 AGCTCCATAACCTGAAAAGGAA 57.342 40.909 0.00 0.00 0.00 3.36
315 316 5.198602 AGCTCCATAACCTGAAAAGGAAT 57.801 39.130 0.00 0.00 0.00 3.01
316 317 6.327386 AGCTCCATAACCTGAAAAGGAATA 57.673 37.500 0.00 0.00 0.00 1.75
317 318 6.360618 AGCTCCATAACCTGAAAAGGAATAG 58.639 40.000 0.00 0.00 0.00 1.73
318 319 5.532779 GCTCCATAACCTGAAAAGGAATAGG 59.467 44.000 0.00 0.00 36.39 2.57
319 320 6.652205 TCCATAACCTGAAAAGGAATAGGT 57.348 37.500 0.00 0.00 45.07 3.08
320 321 7.637301 GCTCCATAACCTGAAAAGGAATAGGTA 60.637 40.741 0.00 0.00 42.47 3.08
321 322 7.571025 TCCATAACCTGAAAAGGAATAGGTAC 58.429 38.462 0.00 0.00 42.47 3.34
322 323 6.482308 CCATAACCTGAAAAGGAATAGGTACG 59.518 42.308 0.00 0.00 42.47 3.67
323 324 5.494390 AACCTGAAAAGGAATAGGTACGT 57.506 39.130 0.00 0.00 42.47 3.57
324 325 4.828829 ACCTGAAAAGGAATAGGTACGTG 58.171 43.478 0.00 0.00 41.54 4.49
325 326 4.529377 ACCTGAAAAGGAATAGGTACGTGA 59.471 41.667 0.00 0.00 41.54 4.35
326 327 5.012354 ACCTGAAAAGGAATAGGTACGTGAA 59.988 40.000 0.00 0.00 41.54 3.18
327 328 5.935789 CCTGAAAAGGAATAGGTACGTGAAA 59.064 40.000 0.00 0.00 0.00 2.69
328 329 6.598064 CCTGAAAAGGAATAGGTACGTGAAAT 59.402 38.462 0.00 0.00 0.00 2.17
362 363 7.557358 TGCTCTTATTCCTGATAATTGCTTTGA 59.443 33.333 0.00 0.00 33.38 2.69
363 364 8.408601 GCTCTTATTCCTGATAATTGCTTTGAA 58.591 33.333 0.00 0.00 31.42 2.69
419 420 4.298626 ACACTAGGCCTCTCCATAAATGA 58.701 43.478 9.68 0.00 37.29 2.57
424 425 7.019388 ACTAGGCCTCTCCATAAATGATTAGA 58.981 38.462 9.68 0.00 37.29 2.10
430 431 8.097038 GCCTCTCCATAAATGATTAGACATACA 58.903 37.037 0.00 0.00 0.00 2.29
433 434 9.440773 TCTCCATAAATGATTAGACATACATGC 57.559 33.333 0.00 0.00 0.00 4.06
467 474 6.376299 ACCGTGTCAACACTAGTTATAGATCA 59.624 38.462 11.23 0.00 44.34 2.92
469 476 6.691818 CGTGTCAACACTAGTTATAGATCACC 59.308 42.308 11.23 0.00 44.34 4.02
474 481 6.621316 ACACTAGTTATAGATCACCAGACG 57.379 41.667 0.00 0.00 32.93 4.18
484 1338 4.446371 AGATCACCAGACGGATTCATTTC 58.554 43.478 0.00 0.00 35.59 2.17
508 1362 7.336396 TCCTACACTAAGGCTTCCTTTTATTC 58.664 38.462 1.30 0.00 41.69 1.75
513 1367 3.850122 AGGCTTCCTTTTATTCGCAAC 57.150 42.857 0.00 0.00 0.00 4.17
564 1421 4.939509 ATGCACGTAAACTGTATCCAAC 57.060 40.909 0.00 0.00 0.00 3.77
607 1776 9.874205 GATTCTATCCAGATGAATCTTAGGAAG 57.126 37.037 16.87 4.24 41.41 3.46
608 1777 7.789202 TCTATCCAGATGAATCTTAGGAAGG 57.211 40.000 4.08 0.00 34.06 3.46
609 1778 7.539292 TCTATCCAGATGAATCTTAGGAAGGA 58.461 38.462 4.08 1.60 34.06 3.36
610 1779 8.013072 TCTATCCAGATGAATCTTAGGAAGGAA 58.987 37.037 4.08 0.00 34.06 3.36
644 1819 5.580297 ACTTTGCGTCATTCAATTTGTTTGT 59.420 32.000 0.00 0.00 36.65 2.83
647 1822 4.269603 TGCGTCATTCAATTTGTTTGTTGG 59.730 37.500 0.00 0.00 36.65 3.77
654 1829 9.092876 TCATTCAATTTGTTTGTTGGTAGAAAC 57.907 29.630 0.00 0.00 37.86 2.78
685 1860 4.097286 GCCCGCCACAAAAATTATCTTCTA 59.903 41.667 0.00 0.00 0.00 2.10
696 1871 9.490663 CAAAAATTATCTTCTAAAGTGTAGGCG 57.509 33.333 0.00 0.00 0.00 5.52
699 1874 3.671008 TCTTCTAAAGTGTAGGCGCAA 57.329 42.857 10.83 0.00 0.00 4.85
700 1875 3.997762 TCTTCTAAAGTGTAGGCGCAAA 58.002 40.909 10.83 0.00 0.00 3.68
701 1876 4.575885 TCTTCTAAAGTGTAGGCGCAAAT 58.424 39.130 10.83 0.00 0.00 2.32
702 1877 4.391830 TCTTCTAAAGTGTAGGCGCAAATG 59.608 41.667 10.83 0.00 0.00 2.32
704 1879 4.320023 TCTAAAGTGTAGGCGCAAATGAA 58.680 39.130 10.83 0.00 0.00 2.57
705 1880 4.941263 TCTAAAGTGTAGGCGCAAATGAAT 59.059 37.500 10.83 0.00 0.00 2.57
706 1881 3.764885 AAGTGTAGGCGCAAATGAATC 57.235 42.857 10.83 0.00 0.00 2.52
707 1882 2.991250 AGTGTAGGCGCAAATGAATCT 58.009 42.857 10.83 0.00 0.00 2.40
709 1884 4.513442 AGTGTAGGCGCAAATGAATCTTA 58.487 39.130 10.83 0.00 0.00 2.10
710 1885 4.941263 AGTGTAGGCGCAAATGAATCTTAA 59.059 37.500 10.83 0.00 0.00 1.85
847 2026 6.779115 AAAATACGCAAACCTTTTGAATCC 57.221 33.333 2.80 0.00 0.00 3.01
852 2031 4.126437 CGCAAACCTTTTGAATCCCTTTT 58.874 39.130 2.80 0.00 0.00 2.27
884 2063 6.071952 GGATTGAATCCTGTTTCTTGTTAGCA 60.072 38.462 16.79 0.00 46.19 3.49
897 2076 9.308318 GTTTCTTGTTAGCATTCAAACCTTTTA 57.692 29.630 0.00 0.00 0.00 1.52
907 2086 8.334632 AGCATTCAAACCTTTTAAAATCAAACG 58.665 29.630 0.09 0.00 0.00 3.60
909 2088 7.541122 TTCAAACCTTTTAAAATCAAACGGG 57.459 32.000 0.09 0.05 32.52 5.28
918 2101 2.499303 AATCAAACGGGCCCTGGAGG 62.499 60.000 22.43 6.07 39.47 4.30
939 2122 0.759060 AAACTTGGGCCCAACTCCAC 60.759 55.000 34.07 0.00 32.00 4.02
949 2132 0.391661 CCAACTCCACCGACAGGATG 60.392 60.000 0.00 0.00 46.00 3.51
989 2172 1.739338 GAGGCCCATGAGACGACGAT 61.739 60.000 0.00 0.00 0.00 3.73
1271 2471 0.107165 TGAGCTCCGAGTGCTAGCTA 60.107 55.000 17.23 0.00 46.29 3.32
1273 2473 0.181587 AGCTCCGAGTGCTAGCTAGA 59.818 55.000 25.15 6.86 44.55 2.43
1274 2474 0.309612 GCTCCGAGTGCTAGCTAGAC 59.690 60.000 25.15 17.80 33.40 2.59
1309 2511 0.867086 CCAATTTGTTTGCTTGCGGG 59.133 50.000 0.00 0.00 33.73 6.13
1472 2713 2.673368 GGAAACGATCTGGCAGTAGTTG 59.327 50.000 15.27 8.45 0.00 3.16
1496 2740 0.681733 AGAAGTCGTGATGTGCACCT 59.318 50.000 15.69 3.77 44.85 4.00
1497 2741 0.792640 GAAGTCGTGATGTGCACCTG 59.207 55.000 15.69 0.00 44.85 4.00
1536 2780 9.513906 TTTCAGTAAGTAATTGGATGTTGATGA 57.486 29.630 0.00 0.00 0.00 2.92
1687 2939 5.930569 ACCCTGTATCTCGTTTTAGTTTCAC 59.069 40.000 0.00 0.00 0.00 3.18
1698 2950 5.108254 CGTTTTAGTTTCACTGCATTTCAGC 60.108 40.000 0.00 0.00 46.76 4.26
1699 2951 5.512753 TTTAGTTTCACTGCATTTCAGCA 57.487 34.783 0.00 0.00 46.76 4.41
1700 2952 5.710513 TTAGTTTCACTGCATTTCAGCAT 57.289 34.783 0.00 0.00 46.76 3.79
1702 2954 5.710513 AGTTTCACTGCATTTCAGCATAA 57.289 34.783 0.00 0.00 46.76 1.90
1703 2955 5.706916 AGTTTCACTGCATTTCAGCATAAG 58.293 37.500 0.00 0.00 46.76 1.73
1704 2956 3.770263 TCACTGCATTTCAGCATAAGC 57.230 42.857 0.00 0.00 46.76 3.09
1720 3377 2.311124 AAGCCAGCGGTACATAGTTC 57.689 50.000 0.00 0.00 0.00 3.01
1724 3381 2.933492 GCCAGCGGTACATAGTTCAACA 60.933 50.000 0.00 0.00 0.00 3.33
1754 3411 7.907045 CAGCAAAATACTAGCAAATGTAGTCAG 59.093 37.037 0.00 0.00 32.81 3.51
1755 3412 7.607991 AGCAAAATACTAGCAAATGTAGTCAGT 59.392 33.333 0.00 0.00 32.81 3.41
1756 3413 7.905493 GCAAAATACTAGCAAATGTAGTCAGTC 59.095 37.037 0.00 0.00 32.81 3.51
1757 3414 7.757097 AAATACTAGCAAATGTAGTCAGTCG 57.243 36.000 0.00 0.00 32.81 4.18
1773 3430 2.995939 CAGTCGTAGCTGCAAGATTTGA 59.004 45.455 1.02 0.00 34.07 2.69
1789 3447 6.566079 AGATTTGAGATGGATGGACTTGTA 57.434 37.500 0.00 0.00 0.00 2.41
1792 3450 5.698741 TTGAGATGGATGGACTTGTATGT 57.301 39.130 0.00 0.00 0.00 2.29
1798 3456 6.600822 AGATGGATGGACTTGTATGTTTCAAG 59.399 38.462 4.45 4.45 45.15 3.02
1820 3479 9.817809 TCAAGTTCTTACAGGTTATATGCTAAG 57.182 33.333 0.00 0.00 0.00 2.18
1840 3538 4.014273 AGAATAACCCCTCTGACCTGAT 57.986 45.455 0.00 0.00 0.00 2.90
1843 3541 2.950990 AACCCCTCTGACCTGATACT 57.049 50.000 0.00 0.00 0.00 2.12
1932 3630 4.277423 GTCAGAGAGCTTACTGGAGGTATC 59.723 50.000 16.97 0.00 36.05 2.24
1941 3639 5.505985 GCTTACTGGAGGTATCGTTGACTAG 60.506 48.000 0.00 0.00 0.00 2.57
1944 3642 4.822896 ACTGGAGGTATCGTTGACTAGATC 59.177 45.833 0.00 0.00 0.00 2.75
1957 3655 6.922407 CGTTGACTAGATCATGATGAGTCATT 59.078 38.462 31.64 10.83 44.35 2.57
1961 3659 8.305317 TGACTAGATCATGATGAGTCATTGATC 58.695 37.037 29.57 26.69 42.37 2.92
1995 3693 4.380973 GCCCCTCTTTTCTTGCTGATTTAC 60.381 45.833 0.00 0.00 0.00 2.01
2158 3878 3.903714 TGAGGTTCCTCAGACATTTCAGA 59.096 43.478 16.47 0.00 38.06 3.27
2167 3887 0.404040 GACATTTCAGACCACCCCCA 59.596 55.000 0.00 0.00 0.00 4.96
2175 3895 3.130450 TCAGACCACCCCCATGATAAAT 58.870 45.455 0.00 0.00 0.00 1.40
2183 3914 2.692557 CCCCCATGATAAATTGCGTGAA 59.307 45.455 0.00 0.00 0.00 3.18
2190 3921 6.017192 CCATGATAAATTGCGTGAATGTCCTA 60.017 38.462 0.00 0.00 0.00 2.94
2191 3922 7.308770 CCATGATAAATTGCGTGAATGTCCTAT 60.309 37.037 0.00 0.00 0.00 2.57
2192 3923 6.958255 TGATAAATTGCGTGAATGTCCTATG 58.042 36.000 0.00 0.00 0.00 2.23
2199 4125 3.120408 GCGTGAATGTCCTATGATGATGC 60.120 47.826 0.00 0.00 0.00 3.91
2214 4143 3.557577 TGATGCCAAGATGTGTTTTCG 57.442 42.857 0.00 0.00 0.00 3.46
2281 4343 9.760660 GACTTTTACTGAATAGTGCATTACTTG 57.239 33.333 0.00 0.00 40.89 3.16
2322 4384 4.227197 ACGACTCTATCCCCAGATTGATT 58.773 43.478 0.00 0.00 34.41 2.57
2614 5254 8.825745 AGAGTATAAGCTTGTAGTTACGAGTAC 58.174 37.037 9.86 0.00 39.42 2.73
2984 5628 5.421056 AGTGTTGGTGAATCGGTAATAGAGA 59.579 40.000 0.00 0.00 0.00 3.10
2985 5629 5.519206 GTGTTGGTGAATCGGTAATAGAGAC 59.481 44.000 0.00 0.00 0.00 3.36
2986 5630 4.931661 TGGTGAATCGGTAATAGAGACC 57.068 45.455 0.00 0.00 0.00 3.85
2987 5631 3.640029 TGGTGAATCGGTAATAGAGACCC 59.360 47.826 0.00 0.00 32.95 4.46
2988 5632 3.896272 GGTGAATCGGTAATAGAGACCCT 59.104 47.826 0.00 0.00 32.95 4.34
2992 5636 3.675348 TCGGTAATAGAGACCCTCCAA 57.325 47.619 0.00 0.00 32.95 3.53
2994 5638 3.895656 TCGGTAATAGAGACCCTCCAATG 59.104 47.826 0.00 0.00 32.95 2.82
2995 5639 3.641906 CGGTAATAGAGACCCTCCAATGT 59.358 47.826 0.00 0.00 32.95 2.71
2997 5641 4.040584 GGTAATAGAGACCCTCCAATGTCC 59.959 50.000 0.00 0.00 31.76 4.02
2998 5642 3.715648 ATAGAGACCCTCCAATGTCCT 57.284 47.619 0.00 0.00 31.76 3.85
2999 5643 1.872773 AGAGACCCTCCAATGTCCTC 58.127 55.000 0.00 0.00 31.76 3.71
3001 5645 1.760029 GAGACCCTCCAATGTCCTCTC 59.240 57.143 0.00 0.00 31.76 3.20
3002 5646 1.079490 AGACCCTCCAATGTCCTCTCA 59.921 52.381 0.00 0.00 31.76 3.27
3003 5647 1.909302 GACCCTCCAATGTCCTCTCAA 59.091 52.381 0.00 0.00 0.00 3.02
3004 5648 2.305927 GACCCTCCAATGTCCTCTCAAA 59.694 50.000 0.00 0.00 0.00 2.69
3005 5649 2.922283 ACCCTCCAATGTCCTCTCAAAT 59.078 45.455 0.00 0.00 0.00 2.32
3007 5651 3.285484 CCTCCAATGTCCTCTCAAATGG 58.715 50.000 0.00 0.00 32.96 3.16
3015 5659 5.902613 TGTCCTCTCAAATGGCATTAAAG 57.097 39.130 14.05 13.42 0.00 1.85
3025 5669 3.465742 TGGCATTAAAGTGCTTGCAAA 57.534 38.095 0.00 0.00 44.45 3.68
3027 5671 3.129871 GGCATTAAAGTGCTTGCAAACA 58.870 40.909 0.00 0.00 44.45 2.83
3036 5680 5.458041 AGTGCTTGCAAACACTCATATTT 57.542 34.783 25.95 6.29 43.55 1.40
3046 5690 6.642131 GCAAACACTCATATTTTTCTGCTGAA 59.358 34.615 1.33 1.33 0.00 3.02
3055 5699 3.389925 TTTTCTGCTGAAAATGCTGGG 57.610 42.857 22.94 0.00 44.39 4.45
3060 5704 2.559668 CTGCTGAAAATGCTGGGAGAAA 59.440 45.455 0.00 0.00 0.00 2.52
3062 5706 2.560105 GCTGAAAATGCTGGGAGAAAGT 59.440 45.455 0.00 0.00 0.00 2.66
3063 5707 3.613432 GCTGAAAATGCTGGGAGAAAGTG 60.613 47.826 0.00 0.00 0.00 3.16
3066 5710 2.299326 AATGCTGGGAGAAAGTGCTT 57.701 45.000 0.00 0.00 0.00 3.91
3076 5720 4.878971 GGGAGAAAGTGCTTAAGGATCTTC 59.121 45.833 4.29 8.47 0.00 2.87
3168 5813 7.336931 AGGTTGGTTGATATAGCTTGTACTTTG 59.663 37.037 0.00 0.00 0.00 2.77
3175 5820 8.932945 TGATATAGCTTGTACTTTGAGAACAG 57.067 34.615 0.00 0.00 0.00 3.16
3176 5821 8.749354 TGATATAGCTTGTACTTTGAGAACAGA 58.251 33.333 0.00 0.00 0.00 3.41
3189 5834 3.316029 TGAGAACAGATTTTGTGTGCAGG 59.684 43.478 0.00 0.00 40.74 4.85
3200 5845 1.827789 TGTGCAGGACAAGGCAACC 60.828 57.895 0.00 0.00 42.45 3.77
3201 5846 2.203480 TGCAGGACAAGGCAACCC 60.203 61.111 0.00 0.00 37.03 4.11
3203 5848 2.672996 CAGGACAAGGCAACCCCG 60.673 66.667 0.00 0.00 39.21 5.73
3204 5849 3.175710 AGGACAAGGCAACCCCGT 61.176 61.111 0.00 0.00 39.21 5.28
3205 5850 2.203437 GGACAAGGCAACCCCGTT 60.203 61.111 0.00 0.00 39.21 4.44
3207 5852 0.958876 GGACAAGGCAACCCCGTTAG 60.959 60.000 0.00 0.00 39.21 2.34
3208 5853 1.583495 GACAAGGCAACCCCGTTAGC 61.583 60.000 0.00 0.00 39.21 3.09
3209 5854 1.303317 CAAGGCAACCCCGTTAGCT 60.303 57.895 0.00 0.00 39.21 3.32
3216 5862 1.737793 CAACCCCGTTAGCTGCTTTAG 59.262 52.381 7.79 0.00 0.00 1.85
3253 5899 7.391554 TGTTTGAAATTCTGATTCCTCCTACTG 59.608 37.037 0.00 0.00 0.00 2.74
3272 5918 2.620115 CTGTTTGTTGAGTGCAGGACAT 59.380 45.455 0.00 0.00 0.00 3.06
3301 5947 4.891756 ACCCGCTAGCTACAATTCTTAGTA 59.108 41.667 13.93 0.00 0.00 1.82
3351 5997 1.403780 GCTGAAAATGCTGCCAAGAGG 60.404 52.381 0.00 0.00 38.23 3.69
3414 6060 4.283467 CGAACAGGGGACATATATTCTCCA 59.717 45.833 13.21 0.00 35.85 3.86
3509 6171 6.371548 TCAATGCCTACTAAAGCTACTTTGTG 59.628 38.462 2.88 0.00 35.21 3.33
3511 6173 5.235516 TGCCTACTAAAGCTACTTTGTGTC 58.764 41.667 2.88 0.00 35.21 3.67
3512 6174 5.011738 TGCCTACTAAAGCTACTTTGTGTCT 59.988 40.000 2.88 0.00 35.21 3.41
3518 6180 0.164647 GCTACTTTGTGTCTGCTGCG 59.835 55.000 0.00 0.00 0.00 5.18
3520 6182 2.135139 CTACTTTGTGTCTGCTGCGAA 58.865 47.619 0.00 0.00 0.00 4.70
3566 6228 4.703093 ACTTAGCAGAGTCTGTAGTTCTCC 59.297 45.833 21.06 2.23 33.43 3.71
3736 6404 2.469516 CGGGTGTAAGCGAATGGGC 61.470 63.158 0.00 0.00 33.03 5.36
3762 6430 1.619977 GGTCCTGAAGGCTCTGGAGTA 60.620 57.143 11.04 0.00 46.91 2.59
3772 6440 2.360801 GGCTCTGGAGTAGCAGAAGTAG 59.639 54.545 0.00 0.00 41.93 2.57
3839 6507 1.308069 GCCTGCGATGTGTGATGGTT 61.308 55.000 0.00 0.00 0.00 3.67
3888 6556 3.126171 CGGCCGAAGTGTGATTTTGATTA 59.874 43.478 24.07 0.00 0.00 1.75
3891 6559 5.743872 GGCCGAAGTGTGATTTTGATTATTC 59.256 40.000 0.00 0.00 0.00 1.75
3917 6585 1.867363 AGTAGCGGGAATTGAGGAGT 58.133 50.000 0.00 0.00 0.00 3.85
3919 6587 3.371965 AGTAGCGGGAATTGAGGAGTTA 58.628 45.455 0.00 0.00 0.00 2.24
3945 6613 6.073331 TGTGTTGCACCTTTCTTTTTCTTTTG 60.073 34.615 0.00 0.00 32.73 2.44
3985 6659 7.124721 TCCATGATGAATAAAAATGGGAGTCA 58.875 34.615 0.00 0.00 38.65 3.41
4064 6738 8.668510 TTGGATTTGCTATTTCTCATCTAGAC 57.331 34.615 0.00 0.00 32.51 2.59
4107 6781 8.988060 TCATCCAACTCCTACACTATTTGATTA 58.012 33.333 0.00 0.00 0.00 1.75
4108 6782 9.613428 CATCCAACTCCTACACTATTTGATTAA 57.387 33.333 0.00 0.00 0.00 1.40
4109 6783 9.614792 ATCCAACTCCTACACTATTTGATTAAC 57.385 33.333 0.00 0.00 0.00 2.01
4110 6784 8.044908 TCCAACTCCTACACTATTTGATTAACC 58.955 37.037 0.00 0.00 0.00 2.85
4241 6952 4.866486 GCATCATTTTTGGAAGATGTGTCC 59.134 41.667 0.00 0.00 39.90 4.02
4269 6980 6.122277 CCAGGACCATTTATTAGCAGAAGAA 58.878 40.000 0.00 0.00 0.00 2.52
4270 6981 6.774656 CCAGGACCATTTATTAGCAGAAGAAT 59.225 38.462 0.00 0.00 0.00 2.40
4271 6982 7.939039 CCAGGACCATTTATTAGCAGAAGAATA 59.061 37.037 0.00 0.00 0.00 1.75
4272 6983 9.512588 CAGGACCATTTATTAGCAGAAGAATAT 57.487 33.333 0.00 0.00 0.00 1.28
4439 7164 3.786635 AGCTAAAGTCGGCTTGTGATAG 58.213 45.455 1.40 2.09 34.96 2.08
4443 7168 2.770164 AGTCGGCTTGTGATAGCTTT 57.230 45.000 0.00 0.00 40.99 3.51
4453 7178 6.258068 GGCTTGTGATAGCTTTCTTACGTTAT 59.742 38.462 5.74 0.00 40.99 1.89
4489 7214 2.949447 AGTTTGGAGCACTTGACCAAT 58.051 42.857 0.00 0.00 42.14 3.16
4497 7222 0.323725 CACTTGACCAATCCCCTGGG 60.324 60.000 5.50 5.50 41.16 4.45
4555 7308 0.555769 AAGAAGGTGAACTTGGCCCA 59.444 50.000 0.00 0.00 40.21 5.36
4569 7322 1.132560 TGGCCCAATCCTTCCCTTTTT 60.133 47.619 0.00 0.00 0.00 1.94
4637 7649 9.330063 ACATACAACATACATGGTTTCTCTATG 57.670 33.333 0.00 0.00 40.23 2.23
4669 7681 4.201753 CCAAGAGACAGCACATAAACGATG 60.202 45.833 0.00 0.00 41.79 3.84
4712 7724 8.253810 AGGATACACATCAACATATAATCGGAG 58.746 37.037 0.00 0.00 41.41 4.63
4716 7728 7.272244 ACACATCAACATATAATCGGAGTGAA 58.728 34.615 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.518161 AGTGTGTAAACATGAATGTAATGTCG 58.482 34.615 0.00 0.00 40.80 4.35
1 2 8.503196 TGAGTGTGTAAACATGAATGTAATGTC 58.497 33.333 0.00 0.00 40.80 3.06
2 3 8.389779 TGAGTGTGTAAACATGAATGTAATGT 57.610 30.769 0.00 0.00 40.80 2.71
3 4 9.844790 AATGAGTGTGTAAACATGAATGTAATG 57.155 29.630 0.00 0.00 40.80 1.90
5 6 9.283768 AGAATGAGTGTGTAAACATGAATGTAA 57.716 29.630 0.00 0.00 40.80 2.41
6 7 8.846943 AGAATGAGTGTGTAAACATGAATGTA 57.153 30.769 0.00 0.00 40.80 2.29
7 8 7.750229 AGAATGAGTGTGTAAACATGAATGT 57.250 32.000 0.00 0.00 44.20 2.71
8 9 8.939929 ACTAGAATGAGTGTGTAAACATGAATG 58.060 33.333 0.00 0.00 0.00 2.67
9 10 9.507329 AACTAGAATGAGTGTGTAAACATGAAT 57.493 29.630 0.00 0.00 0.00 2.57
10 11 8.773645 CAACTAGAATGAGTGTGTAAACATGAA 58.226 33.333 0.00 0.00 0.00 2.57
11 12 7.931407 ACAACTAGAATGAGTGTGTAAACATGA 59.069 33.333 0.00 0.00 0.00 3.07
12 13 8.087982 ACAACTAGAATGAGTGTGTAAACATG 57.912 34.615 0.00 0.00 0.00 3.21
13 14 7.116376 CGACAACTAGAATGAGTGTGTAAACAT 59.884 37.037 0.00 0.00 0.00 2.71
14 15 6.419710 CGACAACTAGAATGAGTGTGTAAACA 59.580 38.462 0.00 0.00 0.00 2.83
15 16 6.128902 CCGACAACTAGAATGAGTGTGTAAAC 60.129 42.308 0.00 0.00 0.00 2.01
16 17 5.924254 CCGACAACTAGAATGAGTGTGTAAA 59.076 40.000 0.00 0.00 0.00 2.01
17 18 5.010314 ACCGACAACTAGAATGAGTGTGTAA 59.990 40.000 0.00 0.00 0.00 2.41
18 19 4.521639 ACCGACAACTAGAATGAGTGTGTA 59.478 41.667 0.00 0.00 0.00 2.90
19 20 3.321111 ACCGACAACTAGAATGAGTGTGT 59.679 43.478 0.00 0.00 0.00 3.72
20 21 3.675225 CACCGACAACTAGAATGAGTGTG 59.325 47.826 0.00 2.46 0.00 3.82
21 22 3.861131 GCACCGACAACTAGAATGAGTGT 60.861 47.826 0.00 0.00 0.00 3.55
22 23 2.668457 GCACCGACAACTAGAATGAGTG 59.332 50.000 0.00 7.42 0.00 3.51
23 24 2.563179 AGCACCGACAACTAGAATGAGT 59.437 45.455 0.00 0.00 0.00 3.41
24 25 3.182967 GAGCACCGACAACTAGAATGAG 58.817 50.000 0.00 0.00 0.00 2.90
25 26 2.560981 TGAGCACCGACAACTAGAATGA 59.439 45.455 0.00 0.00 0.00 2.57
26 27 2.959516 TGAGCACCGACAACTAGAATG 58.040 47.619 0.00 0.00 0.00 2.67
27 28 3.895232 ATGAGCACCGACAACTAGAAT 57.105 42.857 0.00 0.00 0.00 2.40
28 29 3.762288 AGTATGAGCACCGACAACTAGAA 59.238 43.478 0.00 0.00 0.00 2.10
29 30 3.353557 AGTATGAGCACCGACAACTAGA 58.646 45.455 0.00 0.00 0.00 2.43
30 31 3.784701 AGTATGAGCACCGACAACTAG 57.215 47.619 0.00 0.00 0.00 2.57
31 32 4.530710 AAAGTATGAGCACCGACAACTA 57.469 40.909 0.00 0.00 0.00 2.24
32 33 3.402628 AAAGTATGAGCACCGACAACT 57.597 42.857 0.00 0.00 0.00 3.16
33 34 4.024387 TGAAAAAGTATGAGCACCGACAAC 60.024 41.667 0.00 0.00 0.00 3.32
34 35 4.130857 TGAAAAAGTATGAGCACCGACAA 58.869 39.130 0.00 0.00 0.00 3.18
35 36 3.734463 TGAAAAAGTATGAGCACCGACA 58.266 40.909 0.00 0.00 0.00 4.35
36 37 4.946784 ATGAAAAAGTATGAGCACCGAC 57.053 40.909 0.00 0.00 0.00 4.79
37 38 4.759693 ACAATGAAAAAGTATGAGCACCGA 59.240 37.500 0.00 0.00 0.00 4.69
38 39 5.046910 ACAATGAAAAAGTATGAGCACCG 57.953 39.130 0.00 0.00 0.00 4.94
39 40 6.072175 TGGTACAATGAAAAAGTATGAGCACC 60.072 38.462 0.00 0.00 31.92 5.01
40 41 6.908825 TGGTACAATGAAAAAGTATGAGCAC 58.091 36.000 0.00 0.00 31.92 4.40
59 60 8.451908 AGAAAATAAACTAGCATGGATGGTAC 57.548 34.615 0.00 0.00 39.52 3.34
60 61 9.474313 AAAGAAAATAAACTAGCATGGATGGTA 57.526 29.630 0.00 0.00 39.52 3.25
61 62 7.961326 AAGAAAATAAACTAGCATGGATGGT 57.039 32.000 0.00 0.00 41.93 3.55
80 81 9.974980 ACACACAAGAAGAAAACTTAAAAGAAA 57.025 25.926 0.00 0.00 0.00 2.52
81 82 9.974980 AACACACAAGAAGAAAACTTAAAAGAA 57.025 25.926 0.00 0.00 0.00 2.52
82 83 9.974980 AAACACACAAGAAGAAAACTTAAAAGA 57.025 25.926 0.00 0.00 0.00 2.52
84 85 9.751542 TCAAACACACAAGAAGAAAACTTAAAA 57.248 25.926 0.00 0.00 0.00 1.52
85 86 9.751542 TTCAAACACACAAGAAGAAAACTTAAA 57.248 25.926 0.00 0.00 0.00 1.52
86 87 9.751542 TTTCAAACACACAAGAAGAAAACTTAA 57.248 25.926 0.00 0.00 0.00 1.85
87 88 9.751542 TTTTCAAACACACAAGAAGAAAACTTA 57.248 25.926 0.00 0.00 31.07 2.24
88 89 8.655651 TTTTCAAACACACAAGAAGAAAACTT 57.344 26.923 0.00 0.00 31.07 2.66
89 90 8.547894 GTTTTTCAAACACACAAGAAGAAAACT 58.452 29.630 0.00 0.00 34.44 2.66
90 91 7.796660 GGTTTTTCAAACACACAAGAAGAAAAC 59.203 33.333 0.00 0.00 34.44 2.43
91 92 7.713073 AGGTTTTTCAAACACACAAGAAGAAAA 59.287 29.630 2.00 0.00 33.31 2.29
92 93 7.213678 AGGTTTTTCAAACACACAAGAAGAAA 58.786 30.769 2.00 0.00 0.00 2.52
93 94 6.754193 AGGTTTTTCAAACACACAAGAAGAA 58.246 32.000 2.00 0.00 0.00 2.52
94 95 6.339587 AGGTTTTTCAAACACACAAGAAGA 57.660 33.333 2.00 0.00 0.00 2.87
95 96 8.527567 TTAAGGTTTTTCAAACACACAAGAAG 57.472 30.769 2.00 0.00 0.00 2.85
96 97 8.361139 TCTTAAGGTTTTTCAAACACACAAGAA 58.639 29.630 1.85 0.00 0.00 2.52
97 98 7.887381 TCTTAAGGTTTTTCAAACACACAAGA 58.113 30.769 1.85 2.63 0.00 3.02
98 99 8.527567 TTCTTAAGGTTTTTCAAACACACAAG 57.472 30.769 1.85 0.69 0.00 3.16
99 100 8.888579 TTTCTTAAGGTTTTTCAAACACACAA 57.111 26.923 1.85 0.00 0.00 3.33
100 101 8.888579 TTTTCTTAAGGTTTTTCAAACACACA 57.111 26.923 1.85 0.00 0.00 3.72
101 102 9.588774 GTTTTTCTTAAGGTTTTTCAAACACAC 57.411 29.630 1.85 0.00 0.00 3.82
102 103 8.775527 GGTTTTTCTTAAGGTTTTTCAAACACA 58.224 29.630 1.85 0.00 0.00 3.72
103 104 7.953173 CGGTTTTTCTTAAGGTTTTTCAAACAC 59.047 33.333 1.85 0.00 0.00 3.32
104 105 7.871463 TCGGTTTTTCTTAAGGTTTTTCAAACA 59.129 29.630 1.85 0.00 0.00 2.83
105 106 8.242085 TCGGTTTTTCTTAAGGTTTTTCAAAC 57.758 30.769 1.85 2.54 0.00 2.93
106 107 8.828688 TTCGGTTTTTCTTAAGGTTTTTCAAA 57.171 26.923 1.85 0.00 0.00 2.69
107 108 8.828688 TTTCGGTTTTTCTTAAGGTTTTTCAA 57.171 26.923 1.85 0.00 0.00 2.69
108 109 8.828688 TTTTCGGTTTTTCTTAAGGTTTTTCA 57.171 26.923 1.85 0.00 0.00 2.69
147 148 6.238239 GCATGGAAACTAGACTAGCTAAAAGC 60.238 42.308 9.52 3.02 42.84 3.51
148 149 7.044798 AGCATGGAAACTAGACTAGCTAAAAG 58.955 38.462 9.52 0.00 0.00 2.27
149 150 6.947464 AGCATGGAAACTAGACTAGCTAAAA 58.053 36.000 9.52 0.00 0.00 1.52
150 151 6.546428 AGCATGGAAACTAGACTAGCTAAA 57.454 37.500 9.52 0.00 0.00 1.85
151 152 6.070767 ACAAGCATGGAAACTAGACTAGCTAA 60.071 38.462 9.52 0.00 0.00 3.09
152 153 5.422331 ACAAGCATGGAAACTAGACTAGCTA 59.578 40.000 9.52 0.00 0.00 3.32
153 154 4.223923 ACAAGCATGGAAACTAGACTAGCT 59.776 41.667 9.52 0.00 0.00 3.32
154 155 4.508662 ACAAGCATGGAAACTAGACTAGC 58.491 43.478 9.52 0.00 0.00 3.42
155 156 6.868622 ACTACAAGCATGGAAACTAGACTAG 58.131 40.000 8.00 8.00 0.00 2.57
156 157 6.852420 ACTACAAGCATGGAAACTAGACTA 57.148 37.500 0.00 0.00 0.00 2.59
157 158 5.746990 ACTACAAGCATGGAAACTAGACT 57.253 39.130 0.00 0.00 0.00 3.24
158 159 6.631962 ACTACTACAAGCATGGAAACTAGAC 58.368 40.000 0.00 0.00 0.00 2.59
159 160 6.852420 ACTACTACAAGCATGGAAACTAGA 57.148 37.500 0.00 0.00 0.00 2.43
160 161 9.601217 AATTACTACTACAAGCATGGAAACTAG 57.399 33.333 0.00 0.00 0.00 2.57
162 163 9.953565 TTAATTACTACTACAAGCATGGAAACT 57.046 29.630 0.00 0.00 0.00 2.66
186 187 9.308318 CGAGAAATCTTTTTGGGTTTTCTTTTA 57.692 29.630 0.00 0.00 36.91 1.52
187 188 7.822334 ACGAGAAATCTTTTTGGGTTTTCTTTT 59.178 29.630 0.00 0.00 36.91 2.27
188 189 7.327975 ACGAGAAATCTTTTTGGGTTTTCTTT 58.672 30.769 0.00 0.00 36.91 2.52
189 190 6.873997 ACGAGAAATCTTTTTGGGTTTTCTT 58.126 32.000 0.00 0.00 36.91 2.52
190 191 6.465439 ACGAGAAATCTTTTTGGGTTTTCT 57.535 33.333 0.00 0.00 38.86 2.52
191 192 6.978659 AGAACGAGAAATCTTTTTGGGTTTTC 59.021 34.615 0.00 0.00 0.00 2.29
192 193 6.873997 AGAACGAGAAATCTTTTTGGGTTTT 58.126 32.000 0.00 0.00 0.00 2.43
193 194 6.465439 AGAACGAGAAATCTTTTTGGGTTT 57.535 33.333 0.00 0.00 0.00 3.27
194 195 6.465439 AAGAACGAGAAATCTTTTTGGGTT 57.535 33.333 0.00 0.00 32.05 4.11
195 196 6.465439 AAAGAACGAGAAATCTTTTTGGGT 57.535 33.333 0.00 0.00 41.79 4.51
218 219 3.530535 GAAAGCTCCCAACAAGCAAAAA 58.469 40.909 0.00 0.00 42.35 1.94
219 220 2.158971 GGAAAGCTCCCAACAAGCAAAA 60.159 45.455 0.00 0.00 42.35 2.44
220 221 1.412343 GGAAAGCTCCCAACAAGCAAA 59.588 47.619 0.00 0.00 42.35 3.68
221 222 1.039856 GGAAAGCTCCCAACAAGCAA 58.960 50.000 0.00 0.00 42.35 3.91
222 223 2.732289 GGAAAGCTCCCAACAAGCA 58.268 52.632 0.00 0.00 42.35 3.91
231 232 3.870274 ACTATTTACACGGGAAAGCTCC 58.130 45.455 0.00 0.00 41.59 4.70
232 233 5.874895 AAACTATTTACACGGGAAAGCTC 57.125 39.130 0.00 0.00 0.00 4.09
233 234 7.933215 ATAAAACTATTTACACGGGAAAGCT 57.067 32.000 0.00 0.00 33.98 3.74
234 235 8.975410 AAATAAAACTATTTACACGGGAAAGC 57.025 30.769 0.00 0.00 33.98 3.51
252 253 9.402320 CCCCCAAAGAAAAGAAAAGAAATAAAA 57.598 29.630 0.00 0.00 0.00 1.52
253 254 8.553153 ACCCCCAAAGAAAAGAAAAGAAATAAA 58.447 29.630 0.00 0.00 0.00 1.40
254 255 8.096621 ACCCCCAAAGAAAAGAAAAGAAATAA 57.903 30.769 0.00 0.00 0.00 1.40
255 256 7.345914 TGACCCCCAAAGAAAAGAAAAGAAATA 59.654 33.333 0.00 0.00 0.00 1.40
256 257 6.157820 TGACCCCCAAAGAAAAGAAAAGAAAT 59.842 34.615 0.00 0.00 0.00 2.17
257 258 5.485708 TGACCCCCAAAGAAAAGAAAAGAAA 59.514 36.000 0.00 0.00 0.00 2.52
258 259 5.026790 TGACCCCCAAAGAAAAGAAAAGAA 58.973 37.500 0.00 0.00 0.00 2.52
259 260 4.615513 TGACCCCCAAAGAAAAGAAAAGA 58.384 39.130 0.00 0.00 0.00 2.52
260 261 5.128663 TCTTGACCCCCAAAGAAAAGAAAAG 59.871 40.000 0.00 0.00 33.76 2.27
261 262 5.026790 TCTTGACCCCCAAAGAAAAGAAAA 58.973 37.500 0.00 0.00 33.76 2.29
262 263 4.615513 TCTTGACCCCCAAAGAAAAGAAA 58.384 39.130 0.00 0.00 33.76 2.52
263 264 4.215109 CTCTTGACCCCCAAAGAAAAGAA 58.785 43.478 0.00 0.00 33.76 2.52
264 265 3.436470 CCTCTTGACCCCCAAAGAAAAGA 60.436 47.826 0.00 0.00 33.76 2.52
265 266 2.893489 CCTCTTGACCCCCAAAGAAAAG 59.107 50.000 0.00 0.00 33.76 2.27
266 267 2.516277 TCCTCTTGACCCCCAAAGAAAA 59.484 45.455 0.00 0.00 33.76 2.29
267 268 2.108250 CTCCTCTTGACCCCCAAAGAAA 59.892 50.000 0.00 0.00 33.76 2.52
268 269 1.705186 CTCCTCTTGACCCCCAAAGAA 59.295 52.381 0.00 0.00 33.76 2.52
269 270 1.132527 TCTCCTCTTGACCCCCAAAGA 60.133 52.381 0.00 0.00 33.76 2.52
270 271 1.362224 TCTCCTCTTGACCCCCAAAG 58.638 55.000 0.00 0.00 33.76 2.77
271 272 1.705186 CTTCTCCTCTTGACCCCCAAA 59.295 52.381 0.00 0.00 33.76 3.28
272 273 1.132527 TCTTCTCCTCTTGACCCCCAA 60.133 52.381 0.00 0.00 0.00 4.12
273 274 0.491823 TCTTCTCCTCTTGACCCCCA 59.508 55.000 0.00 0.00 0.00 4.96
274 275 1.557371 CTTCTTCTCCTCTTGACCCCC 59.443 57.143 0.00 0.00 0.00 5.40
275 276 1.065782 GCTTCTTCTCCTCTTGACCCC 60.066 57.143 0.00 0.00 0.00 4.95
276 277 1.905894 AGCTTCTTCTCCTCTTGACCC 59.094 52.381 0.00 0.00 0.00 4.46
277 278 3.245518 GAGCTTCTTCTCCTCTTGACC 57.754 52.381 0.00 0.00 0.00 4.02
286 287 4.744795 TCAGGTTATGGAGCTTCTTCTC 57.255 45.455 0.00 0.00 32.70 2.87
287 288 5.505181 TTTCAGGTTATGGAGCTTCTTCT 57.495 39.130 0.00 0.00 32.70 2.85
288 289 5.124617 CCTTTTCAGGTTATGGAGCTTCTTC 59.875 44.000 0.00 0.00 35.06 2.87
289 290 5.012893 CCTTTTCAGGTTATGGAGCTTCTT 58.987 41.667 0.00 0.00 35.06 2.52
290 291 4.289672 TCCTTTTCAGGTTATGGAGCTTCT 59.710 41.667 0.00 0.00 41.69 2.85
291 292 4.589908 TCCTTTTCAGGTTATGGAGCTTC 58.410 43.478 0.00 0.00 41.69 3.86
292 293 4.657814 TCCTTTTCAGGTTATGGAGCTT 57.342 40.909 0.00 0.00 41.69 3.74
293 294 4.657814 TTCCTTTTCAGGTTATGGAGCT 57.342 40.909 0.00 0.00 41.69 4.09
294 295 5.532779 CCTATTCCTTTTCAGGTTATGGAGC 59.467 44.000 0.00 0.00 41.69 4.70
295 296 6.663734 ACCTATTCCTTTTCAGGTTATGGAG 58.336 40.000 0.00 0.00 38.23 3.86
296 297 6.652205 ACCTATTCCTTTTCAGGTTATGGA 57.348 37.500 0.00 0.00 38.23 3.41
297 298 6.482308 CGTACCTATTCCTTTTCAGGTTATGG 59.518 42.308 0.00 0.00 41.60 2.74
298 299 7.011109 CACGTACCTATTCCTTTTCAGGTTATG 59.989 40.741 0.00 0.00 41.60 1.90
299 300 7.046033 CACGTACCTATTCCTTTTCAGGTTAT 58.954 38.462 0.00 0.00 41.60 1.89
300 301 6.211184 TCACGTACCTATTCCTTTTCAGGTTA 59.789 38.462 0.00 0.00 41.60 2.85
301 302 5.012354 TCACGTACCTATTCCTTTTCAGGTT 59.988 40.000 0.00 0.00 41.60 3.50
302 303 4.529377 TCACGTACCTATTCCTTTTCAGGT 59.471 41.667 0.00 0.00 43.73 4.00
303 304 5.080969 TCACGTACCTATTCCTTTTCAGG 57.919 43.478 0.00 0.00 42.50 3.86
304 305 7.611213 ATTTCACGTACCTATTCCTTTTCAG 57.389 36.000 0.00 0.00 0.00 3.02
305 306 7.989416 AATTTCACGTACCTATTCCTTTTCA 57.011 32.000 0.00 0.00 0.00 2.69
306 307 9.687210 AAAAATTTCACGTACCTATTCCTTTTC 57.313 29.630 0.00 0.00 0.00 2.29
401 402 6.787458 TGTCTAATCATTTATGGAGAGGCCTA 59.213 38.462 4.42 0.00 37.63 3.93
419 420 7.224753 CGGTGTCTTTTAGCATGTATGTCTAAT 59.775 37.037 0.00 0.00 31.52 1.73
424 425 4.391830 CACGGTGTCTTTTAGCATGTATGT 59.608 41.667 0.00 0.00 0.00 2.29
454 461 7.175119 TGAATCCGTCTGGTGATCTATAACTAG 59.825 40.741 0.00 0.00 36.30 2.57
455 462 7.002276 TGAATCCGTCTGGTGATCTATAACTA 58.998 38.462 0.00 0.00 36.30 2.24
467 474 3.517901 TGTAGGAAATGAATCCGTCTGGT 59.482 43.478 0.00 0.00 44.60 4.00
469 476 4.759782 AGTGTAGGAAATGAATCCGTCTG 58.240 43.478 0.00 0.00 44.60 3.51
474 481 5.685728 AGCCTTAGTGTAGGAAATGAATCC 58.314 41.667 0.00 0.00 37.50 3.01
484 1338 6.258068 CGAATAAAAGGAAGCCTTAGTGTAGG 59.742 42.308 0.00 0.00 43.92 3.18
508 1362 0.109597 GGTGCTCTTGGAATGTTGCG 60.110 55.000 0.00 0.00 0.00 4.85
513 1367 1.533625 TTTCCGGTGCTCTTGGAATG 58.466 50.000 0.00 0.00 41.18 2.67
561 1418 6.265196 AGAATCTATCAGACTCTAGCCTGTTG 59.735 42.308 0.00 0.00 27.69 3.33
564 1421 8.213518 GATAGAATCTATCAGACTCTAGCCTG 57.786 42.308 21.75 0.00 36.63 4.85
624 1793 4.269603 CCAACAAACAAATTGAATGACGCA 59.730 37.500 0.00 0.00 41.85 5.24
625 1794 4.269844 ACCAACAAACAAATTGAATGACGC 59.730 37.500 0.00 0.00 41.85 5.19
626 1795 5.964887 ACCAACAAACAAATTGAATGACG 57.035 34.783 0.00 0.00 41.85 4.35
627 1796 8.641499 TTCTACCAACAAACAAATTGAATGAC 57.359 30.769 0.00 0.00 41.85 3.06
633 1808 5.276631 GCGGTTTCTACCAACAAACAAATTG 60.277 40.000 0.00 0.00 45.31 2.32
644 1819 1.206371 GGCTCTAGCGGTTTCTACCAA 59.794 52.381 0.00 0.00 45.31 3.67
647 1822 0.248949 CGGGCTCTAGCGGTTTCTAC 60.249 60.000 0.00 0.00 43.26 2.59
671 1846 8.182227 GCGCCTACACTTTAGAAGATAATTTTT 58.818 33.333 0.00 0.00 0.00 1.94
685 1860 3.758554 AGATTCATTTGCGCCTACACTTT 59.241 39.130 4.18 0.00 0.00 2.66
693 1868 7.985634 TTCTTAATTAAGATTCATTTGCGCC 57.014 32.000 24.84 0.00 41.52 6.53
807 1985 8.034215 TGCGTATTTTTCTTTCAAATCATGGAT 58.966 29.630 0.00 0.00 0.00 3.41
808 1986 7.374272 TGCGTATTTTTCTTTCAAATCATGGA 58.626 30.769 0.00 0.00 0.00 3.41
809 1987 7.579589 TGCGTATTTTTCTTTCAAATCATGG 57.420 32.000 0.00 0.00 0.00 3.66
810 1988 9.305110 GTTTGCGTATTTTTCTTTCAAATCATG 57.695 29.630 0.00 0.00 0.00 3.07
811 1989 8.495148 GGTTTGCGTATTTTTCTTTCAAATCAT 58.505 29.630 0.00 0.00 0.00 2.45
812 1990 7.708752 AGGTTTGCGTATTTTTCTTTCAAATCA 59.291 29.630 0.00 0.00 0.00 2.57
813 1991 8.072238 AGGTTTGCGTATTTTTCTTTCAAATC 57.928 30.769 0.00 0.00 0.00 2.17
814 1992 8.432110 AAGGTTTGCGTATTTTTCTTTCAAAT 57.568 26.923 0.00 0.00 0.00 2.32
816 1994 7.835634 AAAGGTTTGCGTATTTTTCTTTCAA 57.164 28.000 0.00 0.00 0.00 2.69
818 1996 7.901002 TCAAAAGGTTTGCGTATTTTTCTTTC 58.099 30.769 0.00 0.00 0.00 2.62
819 1997 7.835634 TCAAAAGGTTTGCGTATTTTTCTTT 57.164 28.000 0.00 0.00 0.00 2.52
822 2001 7.287950 GGATTCAAAAGGTTTGCGTATTTTTC 58.712 34.615 0.00 0.00 0.00 2.29
826 2005 4.526650 AGGGATTCAAAAGGTTTGCGTATT 59.473 37.500 0.00 0.00 0.00 1.89
828 2007 3.492337 AGGGATTCAAAAGGTTTGCGTA 58.508 40.909 0.00 0.00 0.00 4.42
863 2042 6.489700 TGAATGCTAACAAGAAACAGGATTCA 59.510 34.615 11.70 11.70 46.74 2.57
869 2048 6.507023 AGGTTTGAATGCTAACAAGAAACAG 58.493 36.000 0.29 0.00 32.45 3.16
871 2050 7.770801 AAAGGTTTGAATGCTAACAAGAAAC 57.229 32.000 0.29 0.00 32.45 2.78
874 2053 9.877178 TTTTAAAAGGTTTGAATGCTAACAAGA 57.123 25.926 0.00 0.00 32.45 3.02
884 2063 7.254966 GCCCGTTTGATTTTAAAAGGTTTGAAT 60.255 33.333 6.79 0.00 37.45 2.57
897 2076 0.178947 TCCAGGGCCCGTTTGATTTT 60.179 50.000 18.44 0.00 0.00 1.82
907 2086 0.323451 CAAGTTTACCTCCAGGGCCC 60.323 60.000 16.46 16.46 40.27 5.80
909 2088 0.323451 CCCAAGTTTACCTCCAGGGC 60.323 60.000 0.00 0.00 40.27 5.19
918 2101 1.254026 GGAGTTGGGCCCAAGTTTAC 58.746 55.000 39.28 28.78 39.43 2.01
939 2122 6.267496 TGTGATATACATACATCCTGTCGG 57.733 41.667 0.00 0.00 33.42 4.79
950 2133 7.130288 GCCTCGGCTGGATGTGATATACATA 62.130 48.000 0.00 0.00 43.05 2.29
951 2134 6.427350 GCCTCGGCTGGATGTGATATACAT 62.427 50.000 0.00 0.00 44.42 2.29
952 2135 2.562738 CCTCGGCTGGATGTGATATACA 59.437 50.000 0.00 0.00 44.87 2.29
953 2136 2.675317 GCCTCGGCTGGATGTGATATAC 60.675 54.545 0.00 0.00 38.26 1.47
989 2172 0.036105 AGTCATCATCGTGCTTGGCA 60.036 50.000 0.00 0.00 35.60 4.92
1472 2713 1.461127 GCACATCACGACTTCTGAACC 59.539 52.381 0.00 0.00 0.00 3.62
1664 2914 6.404712 GTGAAACTAAAACGAGATACAGGG 57.595 41.667 0.00 0.00 0.00 4.45
1679 2931 6.623549 GCTTATGCTGAAATGCAGTGAAACTA 60.624 38.462 0.00 0.00 46.71 2.24
1687 2939 2.798499 GCTGGCTTATGCTGAAATGCAG 60.798 50.000 0.00 0.00 46.71 4.41
1697 2949 2.069273 CTATGTACCGCTGGCTTATGC 58.931 52.381 0.00 0.00 38.76 3.14
1698 2950 3.386768 ACTATGTACCGCTGGCTTATG 57.613 47.619 0.00 0.00 0.00 1.90
1699 2951 3.386726 TGAACTATGTACCGCTGGCTTAT 59.613 43.478 0.00 0.00 0.00 1.73
1700 2952 2.761767 TGAACTATGTACCGCTGGCTTA 59.238 45.455 0.00 0.00 0.00 3.09
1702 2954 1.191535 TGAACTATGTACCGCTGGCT 58.808 50.000 0.00 0.00 0.00 4.75
1703 2955 1.664151 GTTGAACTATGTACCGCTGGC 59.336 52.381 0.00 0.00 0.00 4.85
1704 2956 2.967362 TGTTGAACTATGTACCGCTGG 58.033 47.619 0.00 0.00 0.00 4.85
1720 3377 7.462109 TTGCTAGTATTTTGCTGTTTTGTTG 57.538 32.000 0.00 0.00 0.00 3.33
1724 3381 9.410556 CTACATTTGCTAGTATTTTGCTGTTTT 57.589 29.630 0.00 0.00 0.00 2.43
1754 3411 3.254060 TCTCAAATCTTGCAGCTACGAC 58.746 45.455 0.00 0.00 0.00 4.34
1755 3412 3.592898 TCTCAAATCTTGCAGCTACGA 57.407 42.857 0.00 0.00 0.00 3.43
1756 3413 3.002042 CCATCTCAAATCTTGCAGCTACG 59.998 47.826 0.00 0.00 0.00 3.51
1757 3414 4.194640 TCCATCTCAAATCTTGCAGCTAC 58.805 43.478 0.00 0.00 0.00 3.58
1773 3430 6.065976 TGAAACATACAAGTCCATCCATCT 57.934 37.500 0.00 0.00 0.00 2.90
1805 3463 7.690256 AGGGGTTATTCTTAGCATATAACCTG 58.310 38.462 19.75 0.00 46.71 4.00
1806 3464 7.739904 AGAGGGGTTATTCTTAGCATATAACCT 59.260 37.037 19.75 8.52 46.71 3.50
1807 3465 7.824779 CAGAGGGGTTATTCTTAGCATATAACC 59.175 40.741 15.74 15.74 46.77 2.85
1815 3474 3.712218 AGGTCAGAGGGGTTATTCTTAGC 59.288 47.826 0.00 0.00 0.00 3.09
1818 3477 3.803340 TCAGGTCAGAGGGGTTATTCTT 58.197 45.455 0.00 0.00 0.00 2.52
1820 3479 4.902448 AGTATCAGGTCAGAGGGGTTATTC 59.098 45.833 0.00 0.00 0.00 1.75
1828 3526 6.702329 ACTACAAAAAGTATCAGGTCAGAGG 58.298 40.000 0.00 0.00 30.93 3.69
1932 3630 5.825507 TGACTCATCATGATCTAGTCAACG 58.174 41.667 30.59 11.13 42.53 4.10
1941 3639 6.782298 AACGATCAATGACTCATCATGATC 57.218 37.500 17.11 17.11 45.26 2.92
1944 3642 6.073927 CCAGTAACGATCAATGACTCATCATG 60.074 42.308 0.00 0.00 45.26 3.07
1995 3693 0.813184 AGAATGCACCTGGAAATGCG 59.187 50.000 0.00 0.00 45.13 4.73
2158 3878 2.397597 GCAATTTATCATGGGGGTGGT 58.602 47.619 0.00 0.00 0.00 4.16
2167 3887 7.445096 TCATAGGACATTCACGCAATTTATCAT 59.555 33.333 0.00 0.00 0.00 2.45
2175 3895 4.135747 TCATCATAGGACATTCACGCAA 57.864 40.909 0.00 0.00 0.00 4.85
2183 3914 4.987963 TCTTGGCATCATCATAGGACAT 57.012 40.909 0.00 0.00 0.00 3.06
2190 3921 5.657474 GAAAACACATCTTGGCATCATCAT 58.343 37.500 0.00 0.00 0.00 2.45
2191 3922 4.379708 CGAAAACACATCTTGGCATCATCA 60.380 41.667 0.00 0.00 0.00 3.07
2192 3923 4.100529 CGAAAACACATCTTGGCATCATC 58.899 43.478 0.00 0.00 0.00 2.92
2199 4125 4.811555 TCTTCACGAAAACACATCTTGG 57.188 40.909 0.00 0.00 0.00 3.61
2296 4358 5.839063 TCAATCTGGGGATAGAGTCGTTTAT 59.161 40.000 0.00 0.00 0.00 1.40
2297 4359 5.205821 TCAATCTGGGGATAGAGTCGTTTA 58.794 41.667 0.00 0.00 0.00 2.01
2556 5196 6.428159 GGTTCTAGAGTCAGCAAAATGAAAGA 59.572 38.462 0.00 0.00 0.00 2.52
2818 5462 2.023318 GCACATGCTCATCCTGCTC 58.977 57.895 0.00 0.00 38.21 4.26
2984 5628 2.044793 TTGAGAGGACATTGGAGGGT 57.955 50.000 0.00 0.00 0.00 4.34
2985 5629 3.285484 CATTTGAGAGGACATTGGAGGG 58.715 50.000 0.00 0.00 0.00 4.30
2986 5630 3.285484 CCATTTGAGAGGACATTGGAGG 58.715 50.000 0.00 0.00 0.00 4.30
2987 5631 2.686915 GCCATTTGAGAGGACATTGGAG 59.313 50.000 0.00 0.00 0.00 3.86
2988 5632 2.041485 TGCCATTTGAGAGGACATTGGA 59.959 45.455 0.00 0.00 0.00 3.53
2992 5636 5.954150 ACTTTAATGCCATTTGAGAGGACAT 59.046 36.000 0.00 0.00 0.00 3.06
2994 5638 5.644644 CACTTTAATGCCATTTGAGAGGAC 58.355 41.667 0.00 0.00 0.00 3.85
2995 5639 4.158394 GCACTTTAATGCCATTTGAGAGGA 59.842 41.667 0.00 0.00 39.86 3.71
3004 5648 8.852696 AGTGTTTGCAAGCACTTTAATGCCAT 62.853 38.462 34.78 15.33 46.33 4.40
3005 5649 7.641949 AGTGTTTGCAAGCACTTTAATGCCA 62.642 40.000 34.78 0.53 46.33 4.92
3007 5651 3.803778 AGTGTTTGCAAGCACTTTAATGC 59.196 39.130 34.78 14.10 46.33 3.56
3015 5659 6.421801 AGAAAAATATGAGTGTTTGCAAGCAC 59.578 34.615 31.86 31.86 39.99 4.40
3036 5680 2.559668 CTCCCAGCATTTTCAGCAGAAA 59.440 45.455 0.00 0.00 41.78 2.52
3046 5690 2.299326 AGCACTTTCTCCCAGCATTT 57.701 45.000 0.00 0.00 0.00 2.32
3053 5697 4.495690 AGATCCTTAAGCACTTTCTCCC 57.504 45.455 0.00 0.00 0.00 4.30
3055 5699 7.680442 AAAGAAGATCCTTAAGCACTTTCTC 57.320 36.000 0.00 0.00 0.00 2.87
3060 5704 8.355913 CAAAGAAAAAGAAGATCCTTAAGCACT 58.644 33.333 0.00 0.00 0.00 4.40
3062 5706 7.147976 GCAAAGAAAAAGAAGATCCTTAAGCA 58.852 34.615 0.00 0.00 0.00 3.91
3063 5707 7.147976 TGCAAAGAAAAAGAAGATCCTTAAGC 58.852 34.615 0.00 0.00 0.00 3.09
3066 5710 6.209391 CCCTGCAAAGAAAAAGAAGATCCTTA 59.791 38.462 0.00 0.00 0.00 2.69
3076 5720 1.000274 CCGGTCCCTGCAAAGAAAAAG 60.000 52.381 0.00 0.00 0.00 2.27
3168 5813 3.565482 TCCTGCACACAAAATCTGTTCTC 59.435 43.478 0.00 0.00 35.47 2.87
3175 5820 2.863704 GCCTTGTCCTGCACACAAAATC 60.864 50.000 7.67 0.00 33.41 2.17
3176 5821 1.069049 GCCTTGTCCTGCACACAAAAT 59.931 47.619 7.67 0.00 33.41 1.82
3189 5834 1.583495 GCTAACGGGGTTGCCTTGTC 61.583 60.000 0.00 0.00 0.00 3.18
3200 5845 1.732259 CACACTAAAGCAGCTAACGGG 59.268 52.381 0.00 0.00 0.00 5.28
3201 5846 1.128692 GCACACTAAAGCAGCTAACGG 59.871 52.381 0.00 0.00 0.00 4.44
3203 5848 2.066262 TCGCACACTAAAGCAGCTAAC 58.934 47.619 0.00 0.00 0.00 2.34
3204 5849 2.066262 GTCGCACACTAAAGCAGCTAA 58.934 47.619 0.00 0.00 0.00 3.09
3205 5850 1.272490 AGTCGCACACTAAAGCAGCTA 59.728 47.619 0.00 0.00 31.37 3.32
3207 5852 0.440371 GAGTCGCACACTAAAGCAGC 59.560 55.000 0.00 0.00 34.41 5.25
3208 5853 1.723542 CAGAGTCGCACACTAAAGCAG 59.276 52.381 0.00 0.00 34.41 4.24
3209 5854 1.068588 ACAGAGTCGCACACTAAAGCA 59.931 47.619 0.00 0.00 34.41 3.91
3216 5862 3.609103 ATTTCAAACAGAGTCGCACAC 57.391 42.857 0.00 0.00 0.00 3.82
3253 5899 2.287788 CCATGTCCTGCACTCAACAAAC 60.288 50.000 0.00 0.00 0.00 2.93
3272 5918 1.078708 GTAGCTAGCGGGTTTGCCA 60.079 57.895 9.55 0.00 36.17 4.92
3301 5947 2.882927 TATTTCAGTAGCATCGCGGT 57.117 45.000 6.13 0.00 0.00 5.68
3351 5997 1.627424 CGTAACCGCGGTTTCGATC 59.373 57.895 46.55 29.89 46.60 3.69
3376 6022 1.165270 GTTCGGAACCCATTGTCCAG 58.835 55.000 9.75 0.00 0.00 3.86
3414 6060 5.671493 CATAAACTGATCCTTACCGTTCCT 58.329 41.667 0.00 0.00 0.00 3.36
3551 6213 4.707448 TCATTCCAGGAGAACTACAGACTC 59.293 45.833 0.00 0.00 37.29 3.36
3566 6228 7.797038 TGAACATGACTATCAATCATTCCAG 57.203 36.000 0.00 0.00 34.49 3.86
3611 6279 3.584406 AGAGGAAGTGTGAGATGTTCG 57.416 47.619 0.00 0.00 0.00 3.95
3612 6280 6.625873 AAAAAGAGGAAGTGTGAGATGTTC 57.374 37.500 0.00 0.00 0.00 3.18
3736 6404 1.671901 GAGCCTTCAGGACCTCCTCG 61.672 65.000 0.00 0.00 46.65 4.63
3762 6430 0.608640 CGGGTTGGTCTACTTCTGCT 59.391 55.000 0.00 0.00 0.00 4.24
3772 6440 4.815108 GATGGCCCCGGGTTGGTC 62.815 72.222 21.85 6.27 35.15 4.02
3839 6507 4.623932 AATCTATCTATGCGGGCTTTCA 57.376 40.909 0.00 0.00 0.00 2.69
3898 6566 1.867363 ACTCCTCAATTCCCGCTACT 58.133 50.000 0.00 0.00 0.00 2.57
3903 6571 3.873910 ACACATAACTCCTCAATTCCCG 58.126 45.455 0.00 0.00 0.00 5.14
3914 6582 5.438761 AAGAAAGGTGCAACACATAACTC 57.561 39.130 3.64 0.00 39.98 3.01
3917 6585 6.872920 AGAAAAAGAAAGGTGCAACACATAA 58.127 32.000 3.64 0.00 39.98 1.90
3919 6587 5.343307 AGAAAAAGAAAGGTGCAACACAT 57.657 34.783 3.64 0.00 39.98 3.21
3945 6613 7.019774 TCATCATGGAAAAGATTCAATCGAC 57.980 36.000 0.00 0.00 37.29 4.20
3956 6624 9.321562 CTCCCATTTTTATTCATCATGGAAAAG 57.678 33.333 0.00 0.00 37.20 2.27
3961 6629 7.069085 ACTGACTCCCATTTTTATTCATCATGG 59.931 37.037 0.00 0.00 35.13 3.66
4070 6744 8.328758 TGTAGGAGTTGGATGAGAATTTGTTAT 58.671 33.333 0.00 0.00 0.00 1.89
4078 6752 7.180229 TCAAATAGTGTAGGAGTTGGATGAGAA 59.820 37.037 0.00 0.00 0.00 2.87
4115 6795 2.946990 ACGTGAAGATTCGTGGGTTTTT 59.053 40.909 0.00 0.00 38.85 1.94
4183 6863 1.079612 TGTGTGGCAGCTCTCATCG 60.080 57.895 0.00 0.00 0.00 3.84
4241 6952 6.533730 TCTGCTAATAAATGGTCCTGGTATG 58.466 40.000 0.00 0.00 0.00 2.39
4301 7012 7.802720 GCTAAATTCAATTGCGGATTTGTTTTT 59.197 29.630 17.25 12.56 0.00 1.94
4302 7013 7.041508 TGCTAAATTCAATTGCGGATTTGTTTT 60.042 29.630 17.25 12.82 0.00 2.43
4303 7014 6.426328 TGCTAAATTCAATTGCGGATTTGTTT 59.574 30.769 17.25 7.94 0.00 2.83
4489 7214 1.311403 CTAGAGCAGTCCCAGGGGA 59.689 63.158 5.33 2.02 42.90 4.81
4539 7292 1.632589 GATTGGGCCAAGTTCACCTT 58.367 50.000 25.16 4.61 0.00 3.50
4542 7295 1.546029 GAAGGATTGGGCCAAGTTCAC 59.454 52.381 25.16 12.01 0.00 3.18
4572 7325 9.171877 GAATGAATACATGGTTCTTCTTCTTCT 57.828 33.333 12.47 0.00 36.79 2.85
4573 7326 8.950210 TGAATGAATACATGGTTCTTCTTCTTC 58.050 33.333 12.47 7.76 36.79 2.87
4574 7327 8.868522 TGAATGAATACATGGTTCTTCTTCTT 57.131 30.769 12.47 0.91 36.79 2.52
4637 7649 2.147150 GCTGTCTCTTGGGACTGTTTC 58.853 52.381 8.83 0.00 37.45 2.78
4669 7681 3.862063 CTCTGCCGTGCAACAACGC 62.862 63.158 0.00 0.00 42.23 4.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.